RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRRAP (Homo sapiens)

Ensembl gene IDs: ENSG00000196367

Ensembl transcript IDs: ENST00000355540.7, ENST00000359863.8, ENST00000360902.2, ENST00000417523.5, ENST00000446306.7, ENST00000456197.2, ENST00000468960.3, ENST00000480695.1, ENST00000482799.3, ENST00000628380.2

Found 3659 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTaGATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTG +
Preference number: 1 (lower is better)
Translates to: PKWMRVALPQGGLAP*IHAERSTRFPRLAV
Trigger: CACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR TCA 90 bp ACTGTGCCTGCCCAGGCAGCGCACGCTGTCACCAAGAGGCTACGCTaGGGAGCCCACACTGTCTCTGGGGCCTCTGGTTCCCAAGGGGCT +
Preference number: 1 (lower is better)
Translates to: TVPAQAAHAVTKRLR*GAHTVSGASGSQGA
Trigger: AGCCCCTTGGGAACCAGAGGCCCCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCCTGGGCAGGCACAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp TCACCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTaGCCTGGCCCCGTGGATCCACGCCGAACGCTCAACGAGATTCCC +
Preference number: 1 (lower is better)
Translates to: SPTESEVDACGAPAG*PGPVDPRRTLNEIP
Trigger: GGGAATCTCGTTGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CCA 90 bp AGCCGGCAGCCTCCCGGGTCCAGCTCCCAGCAATGCTGTGCCGGGTaGACAGAGCTGAGGTTCATGGTCACTGAGTTGCTGCCTGAAGGG +
Preference number: 1 (lower is better)
Translates to: SRQPPGSSSQQCCAG*TELRFMVTELLPEG
Trigger: CCCTTCAGGCAGCAACTCAGTGACCATGAACCTCAGCTCTGTCCACCCGGCACAGCATTGCTGGGAGCTGGACCCGGGAGGCTGCCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 90 bp GCACAGGAGCCGCCTGCAGACTCTCAGAGTTCTGTCTTCACCCACTaGATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: AQEPPADSQSSVFTH*IRSGCVWRSRRVAW
Trigger: CCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGGTGAAGACAGAACTCTGAGAGTCTGCAGGCGGCTCCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR GCA 90 bp TCCTCACTCTGGAGCCGGCAGCCTCCCGGGTCCAGCTCCCAGCAATaGTGTGCCGGGTGGACAGAGCTGAGGTTCATGGTCACTGAGTTG +
Preference number: 1 (lower is better)
Translates to: SSLWSRQPPGSSSQQ*CAGWTELRFMVTEL
Trigger: CAACTCAGTGACCATGAACCTCAGCTCTGTCCACCCGGCACAGCATTGCTGGGAGCTGGACCCGGGAGGCTGCCGGCTCCAGAGTGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp GCCTGCAGACTCTCAGAGTTCTGTCTTCACCCACTGAATCCGAAGTaGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATC +
Preference number: 1 (lower is better)
Translates to: ACRLSEFCLHPLNPK*MRVALPQGGLAPWI
Trigger: GATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGGTGAAGACAGAACTCTGAGAGTCTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CCA 90 bp CCCTCGGCCTTGACCTGTGAGCAGCATGTGGGCTTGGAATCAGGCTaGACGGGCTTCCCTCCCAGTTTCTCCACAGCTGCTCCAGGCCTG +
Preference number: 1 (lower is better)
Translates to: PSALTCEQHVGLESG*TGFPPSFSTAAPGL
Trigger: CAGGCCTGGAGCAGCTGTGGAGAAACTGGGAGGGAAGCCCGTCCAGCCTGATTCCAAGCCCACATGCTGCTCACAGGTCAAGGCCGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 90 bp CTCCCGGGTCCAGCTCCCAGCAATGCTGTGCCGGGTGGACAGAGCTaGGGTTCATGGTCACTGAGTTGCTGCCTGAAGGGCTCCAGACTC +
Preference number: 1 (lower is better)
Translates to: LPGPAPSNAVPGGQS*GSWSLSCCLKGSRL
Trigger: GAGTCTGGAGCCCTTCAGGCAGCAACTCAGTGACCATGAACCTCAGCTCTGTCCACCCGGCACAGCATTGCTGGGAGCTGGACCCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 90 bp AGCGCAAGACGACTCACACAGTGGCCCAGGCCTTGTCACACGCAGTaGGGACAATCAGAGGAGCACGGTCACCGCTCAGGCCTGATGCCA +
Preference number: 1 (lower is better)
Translates to: SARRLTQWPRPCHTQ*GQSEEHGHRSGLMP
Trigger: TGGCATCAGGCCTGAGCGGTGACCGTGCTCCTCTGATTGTCCTCACTGCGTGTGACAAGGCCTGGGCCACTGTGTGAGTCGTCTTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp CCATCAACAGCTGTGCACCGCGGTCCTTGGGGTTGGAGACCCGTTTaGAGGAGGCGGACGGAAGCATGTGCCACAGGCCTCCTGTTTGTA +
Preference number: 1 (lower is better)
Translates to: PSTAVHRGPWGWRPV*RRRTEACATGLLFV
Trigger: TACAAACAGGAGGCCTGTGGCACATGCTTCCGTCCGCCTCCTCCAAACGGGTCTCCAACCCCAAGGACCGCGGTGCACAGCTGTTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 90 bp TGGGTCCACGCGAGTCCCGCTCCAAGGCTTCAAGGCTTTGCAAGGTaGCTGACGTGGAGGCAGGGCTATTCGATGACGCGTCTATGTGCG +
Preference number: 1 (lower is better)
Translates to: WVHASPAPRLQGFAR*LTWRQGYSMTRLCA
Trigger: CGCACATAGACGCGTCATCGAATAGCCCTGCCTCCACGTCAGTCACCTTGCAAAGCCTTGAAGCCTTGGAGCGGGACTCGCGTGGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp GAGCCCAGCACAGAGACCTTGATGGTAGCTGCCAGTACCGCCCACTaGAAACCAGCCTGCACCCAGGCCATAACCCAGCAACACAACTGC +
Preference number: 1 (lower is better)
Translates to: EPSTETLMVAASTAH*KPACTQAITQQHNC
Trigger: GCAGTTGTGTTGCTGGGTTATGGCCTGGGTGCAGGCTGGTTTGCAGTGGGCGGTACTGGCAGCTACCATCAAGGTCTCTGTGCTGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp CCAACCCTAACGCCACCCACACATCTGCACAGACACCAGGCTTCATaGAGCGCAAGACGACTCACACAGTGGCCCAGGCCTTGTCACACG +
Preference number: 1 (lower is better)
Translates to: PTLTPPTHLHRHQAS*SARRLTQWPRPCHT
Trigger: CGTGTGACAAGGCCTGGGCCACTGTGTGAGTCGTCTTGCGCTCCATGAAGCCTGGTGTCTGTGCAGATGTGTGGGTGGCGTTAGGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp TTGGCCATTCCAAGGTTGGTTTTCCCAACAACCAGGGGGAAGGTGTaGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCACCAGTAGCA +
Preference number: 1 (lower is better)
Translates to: LAIPRLVFPTTRGKV*ANLAAGRASSSPVA
Trigger: TGCTACTGGTGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGGTTGTTGGGAAAACCAACCTTGGAATGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp GCTTCTGTGAATATAAGGAACGAGGCAGGGAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGT +
Preference number: 1 (lower is better)
Translates to: ASVNIRNEAGRSRKS*GLRARSALHIPGGR
Trigger: ACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCCTGCCTCGTTCCTTATATTCACAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR GCA 90 bp TCGAAGAAGATGTTTCTGACATCATGGCGTGTGCTCCTTGGGGACTaGCCCTCCCACACGAGGGCAGGCCTGGCTGAAGGTACACACTGG +
Preference number: 1 (lower is better)
Translates to: SKKMFLTSWRVLLGD*PSHTRAGLAEGTHW
Trigger: CCAGTGTGTACCTTCAGCCAGGCCTGCCCTCGTGTGGGAGGGGCAGTCCCCAAGGAGCACACGCCATGATGTCAGAAACATCTTCTTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp GACTGCCCCTCCCACACGAGGGCAGGCCTGGCTGAAGGTACACACTaGATGAAGGACAATGAGGAGGTAGAGCTGGGTACAGAGTGCTTC +
Preference number: 1 (lower is better)
Translates to: DCPSHTRAGLAEGTH*MKDNEEVELGTECF
Trigger: GAAGCACTCTGTACCCAGCTCTACCTCCTCATTGTCCTTCATCCAGTGTGTACCTTCAGCCAGGCCTGCCCTCGTGTGGGAGGGGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp GCCTGTAAAGGGCCATCTTCCTCGAAGAAGATGTTTCTGACATCATaGCGTGTGCTCCTTGGGGACTGCCCCTCCCACACGAGGGCAGGC +
Preference number: 1 (lower is better)
Translates to: ACKGPSSSKKMFLTS*RVLLGDCPSHTRAG
Trigger: GCCTGCCCTCGTGTGGGAGGGGCAGTCCCCAAGGAGCACACGCCATGATGTCAGAAACATCTTCTTCGAGGAAGATGGCCCTTTACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp GAGACCTTGATGGTAGCTGCCAGTACCGCCCACTGCAAACCAGCCTaGACCCAGGCCATAACCCAGCAACACAACTGCGATCTCAAGCTG +
Preference number: 1 (lower is better)
Translates to: ETLMVAASTAHCKPA*TQAITQQHNCDLKL
Trigger: CAGCTTGAGATCGCAGTTGTGTTGCTGGGTTATGGCCTGGGTGCAGGCTGGTTTGCAGTGGGCGGTACTGGCAGCTACCATCAAGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp GCGGGTTTGCTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTaGATGGTCTGGACCCTCCTCACTCTGGAGCCGGCAGCCTCCCGG +
Preference number: 1 (lower is better)
Translates to: AGLLEMVFGEKGHIV*MVWTLLTLEPAASR
Trigger: CCGGGAGGCTGCCGGCTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGCAAACCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 90 bp AAGGGCTCCAGACTCCAGATCCTTGATCTTTCCACGTGGAGCTCATaGGAGCTCCTGGATCTTCACCGGGGAGGTGCTATCTCCTGCCTT +
Preference number: 1 (lower is better)
Translates to: KGSRLQILDLSTWSS*ELLDLHRGGAISCL
Trigger: AAGGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACGTGGAAAGATCAAGGATCTGGAGTCTGGAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp GAGGTAGAGCTGGGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATaGTTCGTGTACACTCCGCACACTCTCCACACACACACGTTACAT +
Preference number: 1 (lower is better)
Translates to: EVELGTECFMLSLRA*FVYTPHTLHTHTLH
Trigger: ATGTAACGTGTGTGTGTGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACCCAGCTCTACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp TCCTTGGGGTTGGAGACCCGTTTGGAGGAGGCGGACGGAAGCATGTaGCACAGGCCTCCTGTTTGTAGCTTTCTTCCTGTCTCAACATCT +
Preference number: 1 (lower is better)
Translates to: SLGLETRLEEADGSM*HRPPVCSFLPVSTS
Trigger: AGATGTTGAGACAGGAAGAAAGCTACAAACAGGAGGCCTGTGGCACATGCTTCCGTCCGCCTCCTCCAAACGGGTCTCCAACCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp GTTTGCTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTGCATaGTCTGGACCCTCCTCACTCTGGAGCCGGCAGCCTCCCGGGTCC +
Preference number: 1 (lower is better)
Translates to: VCLKWCLEKKGILSA*SGPSSLWSRQPPGS
Trigger: GGACCCGGGAGGCTGCCGGCTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGCAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp AGGACACCCACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTaGAAAGCACGGCTCCCATCATTCCAGAACCCAAGACACTGTCTC +
Preference number: 1 (lower is better)
Translates to: RTPTSCQMSTQSLLI*KARLPSFQNPRHCL
Trigger: GAGACAGTGTCTTGGGTTCTGGAATGATGGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTGGGTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp TTCCACGTGGAGCTCATGAGAGCTCCTGGATCTTCACCGGGGAGGTaGTATCTCCTGCCTTGGCCATTCCAAGGTTGGTTTTCCCAACAA +
Preference number: 1 (lower is better)
Translates to: FHVELMRAPGSSPGR*YLLPWPFQGWFSQQ
Trigger: TTGTTGGGAAAACCAACCTTGGAATGGCCAAGGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp CCTCAGCTGATCATAGGCGGCCTGGATAAAATAGACTTGAACGACTaGAAGTCGAACACGCGGCTGAAGCACTGTGTGGCCGACAGCAAC +
Preference number: 1 (lower is better)
Translates to: PQLIIGGLDKIDLND*KSNTRLKHCVADSN
Trigger: GTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTGTTCGACTTCCAGTCGTTCAAGTCTATTTTATCCAGGCCGCCTATGATCAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp GGGACGTGCCGTTATTCATGGTTAGCTCTGTTCAGTGTCACCGGTTaGTTCTTTGATACTCCTCACCGATGCAGAGCAAAAACCCCGCTT +
Preference number: 1 (lower is better)
Translates to: GTCRYSWLALFSVTG*FFDTPHRCRAKTPL
Trigger: AAGCGGGGTTTTTGCTCTGCATCGGTGAGGAGTATCAAAGAACCAACCGGTGACACTGAACAGAGCTAACCATGAATAACGGCACGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp CTGCCAAGGGACATCTTGTCAAGGCCCTTTCATTTGACCCTGTGGTaGGATTTGGGTAAACTCAGCTGTAATCATCATTCCGTGGTAGCC +
Preference number: 1 (lower is better)
Translates to: LPRDILSRPFHLTLW*DLGKLSCNHHSVVA
Trigger: GGCTACCACGGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTCCCTTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp CCATCATTCCAGAACCCAAGACACTGTCTCACAAAGACAGCTCTCTaGAAGGAACTGGGAAGTAACTTGAGTCCAGTCAGACCGGCAAAA +
Preference number: 1 (lower is better)
Translates to: PSFQNPRHCLTKTAL*KELGSNLSPVRPAK
Trigger: TTTTGCCGGTCTGACTGGACTCAAGTTACTTCCCAGTTCCTTGCAGAGAGCTGTCTTTGTGAGACAGTGTCTTGGGTTCTGGAATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp GCTTTCTTCCTGTCTCAACATCTGCCTAGTACACAGCTGCTGCTTTaGTTGGGAATCGACTTTTCACTGTTGTGTGTCGGGTACCTAGGA +
Preference number: 1 (lower is better)
Translates to: AFFLSQHLPSTQLLL*LGIDFSLLCVGYLG
Trigger: TCCTAGGTACCCGACACACAACAGTGAAAAGTCGATTCCCAAGCAAAGCAGCAGCTGTGTACTAGGCAGATGTTGAGACAGGAAGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 90 bp GCGATCTCAAGCTGCCAAGGGACATCTTGTCAAGGCCCTTTCATTTaGCCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATT +
Preference number: 1 (lower is better)
Translates to: AISSCQGTSCQGPFI*PCGGIWVNSAVIII
Trigger: AATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTCCCTTGGCAGCTTGAGATCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 90 bp ATCGACTTTTCACTGTTGTGTGTCGGGTACCTAGGAGGCGCATCCTaGCGTGGGTTTATGCATTTTGGAAGTAATTCACCTTTCTGCACC +
Preference number: 1 (lower is better)
Translates to: IDFSLLCVGYLGGAS*RGFMHFGSNSPFCT
Trigger: GGTGCAGAAAGGTGAATTACTTCCAAAATGCATAAACCCACGTCAGGATGCGCCTCCTAGGTACCCGACACACAACAGTGAAAAGTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 90 bp AAGCTGCCAAGGGACATCTTGTCAAGGCCCTTTCATTTGACCCTGTaGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCGTGGTA +
Preference number: 1 (lower is better)
Translates to: KLPRDILSRPFHLTL*WDLGKLSCNHHSVV
Trigger: TACCACGGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTCCCTTGGCAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 90 bp TCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTGAATATAAGGAACGAGGCAGGGAGA +
Preference number: 1 (lower is better)
Translates to: SLSYTQTTRKITATQ*NYGASVNIRNEAGR
Trigger: TCTCCCTGCCTCGTTCCTTATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR TCA 90 bp CCGTTATTCATGGTTAGCTCTGTTCAGTGTCACCGGTTGGTTCTTTaGTACTCCTCACCGATGCAGAGCAAAAACCCCGCTTTGGTTATA +
Preference number: 1 (lower is better)
Translates to: PLFMVSSVQCHRLVL*YSSPMQSKNPALVI
Trigger: TATAACCAAAGCGGGGTTTTTGCTCTGCATCGGTGAGGAGTATCAAAGAACCAACCGGTGACACTGAACAGAGCTAACCATGAATAACGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 90 bp CTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTaGTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTC +
Preference number: 1 (lower is better)
Translates to: LNEIPKAGCVQPKTL*SEKNQHDGFINSCF
Trigger: GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR TCA 90 bp CTGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTaGGGTGTTATTTCCGAAAGAGTTAAAAATGGATGGAAGGGAGCT +
Preference number: 1 (lower is better)
Translates to: LYTCYKGLYKSTKLL*GVISERVKNGWKGA
Trigger: AGCTCCCTTCCATCCATTTTTAACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR CCA 90 bp CCAGGGGGAAGGTGTGGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCACCAGAGCCCACACTGTCTCTaGGGCCTCTGGTTCCCAAGG +
Preference number: 2 (lower is better)
Translates to: PGGRCGRTWQQAGPLPHQSPHCL*GLWFPR
Trigger: CCTTGGGAACCAGAGGCCCCAGAGACAGTGTGGGCT...CTGGTGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAGTCACCGCTCAGGCCTaGTGCCAGCAGGACACCCAC +
Preference number: 2 (lower is better)
Translates to: HAAEALCGRQQHRAVVLAVTAQA*CQQDTH
Trigger: GTGGGTGTCCTGCTGGCATCAGGCCTGAGCGGTGAC...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CCA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCTCCCGCAGGGTGGCCTaGCCCCGTGGATCCACGCCG +
Preference number: 2 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPSRRVA*PRGSTP
Trigger: CGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGA...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CCA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAATGGCGTGTGCTCCTTaGGGACTGCCCCTCCCACAC +
Preference number: 2 (lower is better)
Translates to: HAAEALCGRQQHRAVVLAMACAP*GLPLPH
Trigger: GTGTGGGAGGGGCAGTCCCCAAGGAGCACACGCCAT...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 90 bp CCCATCAACAGCTGTGCACCGCGGTCCTTGGGGTTGGAGACCCGTTaGGAGGAGGCGGACGGAAGCATGTGCCACAGGCCTCCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: PINSCAPRSLGLETR*EEADGSMCHRPPVC
Trigger: ACAAACAGGAGGCCTGTGGCACATGCTTCCGTCCGCCTCCTCCAAACGGGTCTCCAACCCCAAGGACCGCGGTGCACAGCTGTTGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWITATQ*NYGASV
Trigger: CACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTAT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CAA 90 bp CCAGGCTTCATGGAGCGCAAGACGACTCACACAGTGGCCCAGGCCTaGTCACACGCAGTGAGGACAATCAGAGGAGCACGGTCACCGCTC +
Preference number: 2 (lower is better)
Translates to: PGFMERKTTHTVAQA*SHAVRTIRGARSPL
Trigger: GAGCGGTGACCGTGCTCCTCTGATTGTCCTCACTGCGTGTGACAAGGCCTGGGCCACTGTGTGAGTCGTCTTGCGCTCCATGAAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGCACGAAGCTGCTGTaGGGTGTTATTTCCGAAAGA +
Preference number: 2 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSTKLL*GVISER
Trigger: TCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAGCACGAAGCTGCTGTaGGGTGTTATTTCCGAAAGA +
Preference number: 2 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWSTKLL*GVISER
Trigger: TCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 2 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTNKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGACAAAAGCACGAAGCTaGTGTGAGGTGTTATTTCCG +
Preference number: 2 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTTKARS*CEVLFP
Trigger: CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR TCA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTACCACCCCTCTGGGCTaGGGGCTGGAGCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLTTPLG*GLEPST
Trigger: TGTGCTGGGCTCCAGCCCTCAGCCCAGAGGGGTGGT...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 2 (lower is better)
Translates to: PTESEVDACGAPAGWPGPNKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCACAAAAGCACGAAGCTaGTGTGAGGTGTTATTTCCG +
Preference number: 2 (lower is better)
Translates to: PTESEVDACGAPAGWPGPTKARS*CEVLFP
Trigger: CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp GGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACTCCGAGAGTCTGGCATaGCGACCCGCTGCTGAGATC +
Preference number: 2 (lower is better)
Translates to: GTECFMLSLRACFVYTPHSESLA*RPAAEI
Trigger: GATCTCAGCAGCGGGTCGGCATGCCAGACTCTCGGA...GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp GGCTATTCGATGACGCGTCTATGTGCGCTGTGGGCAGGAAGAGCTGGAAGGTGGTCTACGAGAAGCTGCTaGCAGCCGTGGAGGAGACCT +
Preference number: 2 (lower is better)
Translates to: GYSMTRLCALWAGRAGRWSTRSC*QPWRRP
Trigger: AGGTCTCCTCCACGGCTGTCAGCAGCTTCTCGTAGA...CCACCTTCCAGCTCTTCCTGCCCACAGCGCACATAGACGCGTCATCGAATAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp GGAAACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTGGCTCCTGCAGTTTGTaGCTGGGTCCACGCGAGTCC +
Preference number: 2 (lower is better)
Translates to: GNMPYRPQPHLTLAEFSSGSCSL*LGPRES
Trigger: GGACTCGCGTGGACCCAGTCACAAACTGCAGGAGCC...AGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATACAAAAGCACGAAGCTaGTGTGAGGTGTTATTTCCG +
Preference number: 2 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDTKARS*CEVLFP
Trigger: CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CAA 90 bp GCAAAAATCAGTCCCTCGGCCTTGACCTGTGAGCAGCATGTGGGCTaGGAATCAGGCTGGACGGGCTTCCCTCCCAGTTTCTCCACAGCT +
Preference number: 2 (lower is better)
Translates to: AKISPSALTCEQHVG*ESGWTGFPPSFSTA
Trigger: AGCTGTGGAGAAACTGGGAGGGAAGCCCGTCCAGCCTGATTCCAAGCCCACATGCTGCTCACAGGTCAAGGCCGAGGGACTGATTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp GGCTATTCGATGACGCGTCTATGTGCGCTGTGGGCAGGAAGAGCTGGAAGGTGGTCCACGTGGAGCTCATaGGAGCTCCTGGATCTTCAC +
Preference number: 2 (lower is better)
Translates to: GYSMTRLCALWAGRAGRWSTWSS*ELLDLH
Trigger: GTGAAGATCCAGGAGCTCTCATGAGCTCCACGTGGA...CCACCTTCCAGCTCTTCCTGCCCACAGCGCACATAGACGCGTCATCGAATAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAGGACTGCCCACACGGTaGCTCTCTTTTGTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: HAAEALCGRQQHRAVVLAGLPTR*LSFVLF
Trigger: AAAAAGGACAAAAGAGAGTCACCGTGTGGGCAGTCC...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR GCA 90 bp CACATGTCCTTGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATGGTTCTGAGCCTCCGGGCATaGTTCGTGTACACTCCGCAC +
Preference number: 2 (lower is better)
Translates to: HMSLSVLERPWDVPLFMVLSLRA*FVYTPH
Trigger: GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAG...AACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR GCA 90 bp GGAAACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCGCCACCCACACATCTaGACAGACACCAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: GNMPYRPQPHLTLAEFSSRHPHI*TDTRLH
Trigger: ATGAAGCCTGGTGTCTGTGCAGATGTGTGGGTGGCG...AGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR GCA 90 bp CACATGTCCTTGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATGGTTGTCCTAGGGCTGGACTaGCCACACGGTGACTCTCTT +
Preference number: 2 (lower is better)
Translates to: HMSLSVLERPWDVPLFMVVLGLD*PHGDSL
Trigger: AAGAGAGTCACCGTGTGGGCAGTCCAGCCCTAGGAC...AACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 90 bp GACCTGCGGGTTTGCTTGAAATGGTGTTTGGAGAAAAAGGGCATATaGTCTGCATGGTCTGGACCCTCCTCACTCTGGAGCCGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: DLRVCLKWCLEKKGI*SAWSGPSSLWSRQP
Trigger: AGGCTGCCGGCTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGCAAACCCGCAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 90 bp TCTGCACCTCCTCAGCTGATCATAGGCGGCCTGGATAAAATAGACTaGAACGACTGGAAGTCGAACACGCGGCTGAAGCACTGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: SAPPQLIIGGLDKID*NDWKSNTRLKHCVA
Trigger: GGCCACACAGTGCTTCAGCCGCGTGTTCGACTTCCAGTCGTTCAAGTCTATTTTATCCAGGCCGCCTATGATCAGCTGAGGAGGTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp CACATGTCCTTGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATGGTTACACATGAAGATAGCTaGGGGCTCCGAGAGTCTGGC +
Preference number: 2 (lower is better)
Translates to: HMSLSVLERPWDVPLFMVTHEDS*GLRESG
Trigger: GCCAGACTCTCGGAGCCCTCAGCTATCTTCATGTGT...AACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR GCA 90 bp CCACTGCACCCAGCAGGGGTTGAACTTTTTAAGCCAATTGCGGAAACATGCCCTAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: PLHPAGVELFKPIAETCPRSRKS*GLRARS
Trigger: GCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCT...AGGGCATGTTTCCGCAATTGGCTTAAAAAGTTCAACCCCTGCTGGGTGCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CCA 90 bp AAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCAGAGAGCTGAAGGTACACACTaGATGAAGGACAATGAGGAG +
Preference number: 2 (lower is better)
Translates to: KESQGLEKVLWPAAEVQRAEGTH*MKDNEE
Trigger: CTCCTCATTGTCCTTCATCCAGTGTGTACCTTCAGC...TCTCTGGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 90 bp CACTGTCTCACAAAGACAGCTCTCTGCAAGGAACTGGGAAGTAACTaGAGTCCAGTCAGACCGGCAAAAATCAGTCCCTCGGCCTTGACC +
Preference number: 2 (lower is better)
Translates to: HCLTKTALCKELGSN*SPVRPAKISPSALT
Trigger: GGTCAAGGCCGAGGGACTGATTTTTGCCGGTCTGACTGGACTCAAGTTACTTCCCAGTTCCTTGCAGAGAGCTGTCTTTGTGAGACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp CCACTGCACCCAGCAGGGGTTGAACTTTTTAAGCCAATTGCGGAAACATGCCCTCTGGATGAAGGACAATaGGGAGGTAGAGCTGGGTAC +
Preference number: 2 (lower is better)
Translates to: PLHPAGVELFKPIAETCPLDEGQ*GGRAGY
Trigger: GTACCCAGCTCTACCTCCTCATTGTCCTTCATCCAG...AGGGCATGTTTCCGCAATTGGCTTAAAAAGTTCAACCCCTGCTGGGTGCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp CCACTGCACCCAGCAGGGGTTGAACTTTTTAAGCCAATTGCGGAAACATGCCCTCAAGGCCCTTTCATTTaGCCCTGTGGTGGGATTTGG +
Preference number: 2 (lower is better)
Translates to: PLHPAGVELFKPIAETCPQGPFI*PCGGIW
Trigger: CCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTG...AGGGCATGTTTCCGCAATTGGCTTAAAAAGTTCAACCCCTGCTGGGTGCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CCA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCAGGGCTCCGAGAGTCTaGCATGCCGACCCGCTGCTG +
Preference number: 2 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSRAPRV*HADPLL
Trigger: CAGCAGCGGGTCGGCATGCCAGACTCTCGGAGCCCT...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp CCACTGCACCCAGCAGGGGTTGAACTTTTTAAGCCAATTGCGGAAACATGCCCTAACTGGGAAGTAACTTaGGTCCAGTCAGACCGGCAA +
Preference number: 2 (lower is better)
Translates to: PLHPAGVELFKPIAETCPNWEVT*VQSDRQ
Trigger: TTGCCGGTCTGACTGGACTCAAGTTACTTCCCAGTT...AGGGCATGTTTCCGCAATTGGCTTAAAAAGTTCAACCCCTGCTGGGTGCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 2 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTNKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR CCA 90 bp CACATGTCCTTGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATGGTTAGGCGCATCCTGACGTaGGTTTATGCATTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: HMSLSVLERPWDVPLFMVRRILT*VYAFWK
Trigger: CTTCCAAAATGCATAAACCCACGTCAGGATGCGCCT...AACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 90 bp TTGAGGTTGGTCCTAGGGCTGGACTGCCCACACGGTGACTCTCTTTaGTCCTTTTTCAGCTTTAACCGGATCGACATTCCACCATATGAG +
Preference number: 2 (lower is better)
Translates to: LRLVLGLDCPHGDSL*SFFSFNRIDIPPYE
Trigger: CTCATATGGTGGAATGTCGATCCGGTTAAAGCTGAAAAAGGACAAAAGAGAGTCACCGTGTGGGCAGTCCAGCCCTAGGACCAACCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 90 bp TTCTTCCTGTCTCAACATCTGCCTAGTACACAGCTGCTGCTTTGCTaGGGAATCGACTTTTCACTGTTGTGTGTCGGGTACCTAGGAGGC +
Preference number: 2 (lower is better)
Translates to: FFLSQHLPSTQLLLC*GIDFSLLCVGYLGG
Trigger: GCCTCCTAGGTACCCGACACACAACAGTGAAAAGTCGATTCCCAAGCAAAGCAGCAGCTGTGTACTAGGCAGATGTTGAGACAGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASITATQ*NYGASV
Trigger: CACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTAT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSRSRKS*GLRARS
Trigger: GCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 2 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKNKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp CACATGTCCTTGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATGGTTAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 2 (lower is better)
Translates to: HMSLSVLERPWDVPLFMVNKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...AACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR GCA 90 bp CACATGTCCTTGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATGGTTACACAGCTGCTGCTTTaGTTGGGAATCGACTTTTCA +
Preference number: 2 (lower is better)
Translates to: HMSLSVLERPWDVPLFMVTQLLL*LGIDFS
Trigger: TGAAAAGTCGATTCCCAAGCAAAGCAGCAGCTGTGT...AACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 90 bp AGGGACATCTTGTCAAGGCCCTTTCATTTGACCCTGTGGTGGGATTaGGGTAAACTCAGCTGTAATCATCATTCCGTGGTAGCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: RDILSRPFHLTLWWD*GKLSCNHHSVVAWN
Trigger: GTTCCAGGCTACCACGGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 90 bp ATAACCCAGCAACACAACTGCGATCTCAAGCTGCCAAGGGACATCTaGTCAAGGCCCTTTCATTTGACCCTGTGGTGGGATTTGGGTAAA +
Preference number: 2 (lower is better)
Translates to: ITQQHNCDLKLPRDI*SRPFHLTLWWDLGK
Trigger: TTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTCCCTTGGCAGCTTGAGATCGCAGTTGTGTTGCTGGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGITATQ*NYGASV
Trigger: CACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTAT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQRSRKS*GLRARS
Trigger: GCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSRSRKS*GLRARS
Trigger: GCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CAA 90 bp ACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTaGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGT +
Preference number: 2 (lower is better)
Translates to: TLNEIPKAGCVQPKT*CSEKNQHDGFINSC
Trigger: ACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CAA 90 bp TGCGATCTCAAGCTGCCAAGGGACATCTTGTCAAGGCCCTTTCATTaGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCAT +
Preference number: 2 (lower is better)
Translates to: CDLKLPRDILSRPFH*TLWWDLGKLSCNHH
Trigger: ATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTCCCTTGGCAGCTTGAGATCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGITATQ*NYGASV
Trigger: CACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTAT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR TCA 90 bp TGCTACGATAGCTTCTTAAAGGATGTCTTTTTCTTTGCACAAATACTGGAAATGATCAGGCCGCCATTCTaGGAGTCCCGCACGCCGACC +
Preference number: 2 (lower is better)
Translates to: CYDSFLKDVFFFAQILEMIRPPF*ESRTPT
Trigger: GGTCGGCGTGCGGGACTCTCAGAATGGCGGCCTGAT...CATTTCCAGTATTTGTGCAAAGAAAAAGACATCCTTTAAGAAGCTATCGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTRSRKS*GLRARS
Trigger: GCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLITATQ*NYGASV
Trigger: CACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTAT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR TCA 90 bp TGCTACGATAGCTTCTTAAAGGATGTCTTTTTCTTTGCACAAATACTGGAAATGTCATGGCCTCCCCTGTaGTCACAGCAGCACTGTGCC +
Preference number: 2 (lower is better)
Translates to: CYDSFLKDVFFFAQILEMSWPPL*SQQHCA
Trigger: GGCACAGTGCTGCTGTGATCACAGGGGAGGCCATGA...CATTTCCAGTATTTGTGCAAAGAAAAAGACATCCTTTAAGAAGCTATCGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACAGACCGGAGAATCCTaGCTTCTTAAAAGATTATTT +
Preference number: 2 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGQTGES*LLKRLF
Trigger: AAATAATCTTTTAAGAAGCCAGGATTCTCCGGTCTG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGCACGAAGCTGCTGTaGGGTGTTATTTCCGAAAGA +
Preference number: 2 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSTKLL*GVISER
Trigger: TCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 2 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQNKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCACAAAAGCACGAAGCTaGTGTGAGGTGTTATTTCCG +
Preference number: 2 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFTKARS*CEVLFP
Trigger: CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACAGACCGGAGAATCCTaGCTTCTTAAAAGATTATTT +
Preference number: 2 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKQTGES*LLKRLF
Trigger: AAATAATCTTTTAAGAAGCCAGGATTCTCCGGTCTG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACAGACCGGAGAATCCTaGCTTCTTAAAAGATTATTT +
Preference number: 2 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLQTGES*LLKRLF
Trigger: AAATAATCTTTTAAGAAGCCAGGATTCTCCGGTCTG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGAGTTAAAAATGGATaGAAGGGAGCTGTTCGTACA +
Preference number: 2 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFRVKNG*KGAVRT
Trigger: TGTACGAACAGCTCCCTTCCATCCATTTTTAACTCT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCAGACCGGAGAATCCTaGCTTCTTAAAAGATTATTT +
Preference number: 2 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTQTGES*LLKRLF
Trigger: AAATAATCTTTTAAGAAGCCAGGATTCTCCGGTCTG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CCA 72 bp ATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTaGATCCACGCCGAACGCTCAACGAGATTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: MRVALPQGGLAP*IHAERSTRFPR
Trigger: CCTTGGGAATCTCGTTGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CCA 72 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTaGCCCCGTGGATCCACGCCGAACGCTCAACGAGAT +
Preference number: 3 (lower is better)
Translates to: RSGCVWRSRRVA*PRGSTPNAQRD
Trigger: ATCTCGTTGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CCA 72 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTaGCCTGGCCCCGTGGATCCACGCCGAACGCTCAAC +
Preference number: 3 (lower is better)
Translates to: ESEVDACGAPAG*PGPVDPRRTLN
Trigger: GTTGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR TCA 72 bp GCCCAGGCAGCGCACGCTGTCACCAAGAGGCTACGCTaGGGAGCCCACACTGTCTCTGGGGCCTCTGGTTCC +
Preference number: 3 (lower is better)
Translates to: AQAAHAVTKRLR*GAHTVSGASGS
Trigger: GGAACCAGAGGCCCCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp TGGAGCCGGCAGCCTCCCGGGTCCAGCTCCCAGCAATaGTGTGCCGGGTGGACAGAGCTGAGGTTCATGGTC +
Preference number: 3 (lower is better)
Translates to: WSRQPPGSSSQQ*CAGWTELRFMV
Trigger: GACCATGAACCTCAGCTCTGTCCACCCGGCACAGCATTGCTGGGAGCTGGACCCGGGAGGCTGCCGGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp GCTGTGCACCGCGGTCCTTGGGGTTGGAGACCCGTTTaGAGGAGGCGGACGGAAGCATGTGCCACAGGCCTC +
Preference number: 3 (lower is better)
Translates to: AVHRGPWGWRPV*RRRTEACATGL
Trigger: GAGGCCTGTGGCACATGCTTCCGTCCGCCTCCTCCAAACGGGTCTCCAACCCCAAGGACCGCGGTGCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp CGTGGAGCTCATGAGAGCTCCTGGATCTTCACCGGGGAGGTGCTATCTCCTGCCGAGCAGCATGTGGGCTaGGAATCAGGCTGGACGGGC +
Preference number: 3 (lower is better)
Translates to: RGAHESSWIFTGEVLSPAEQHVG*ESGWTG
Trigger: GCCCGTCCAGCCTGATTCCAAGCCCACATGCTGCTC...GGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp CGACTCACACAGTGGCCCAGGCCTTGTCACACGCAGTaGGGACAATCAGAGGAGCACGGTCACCGCTCAGGC +
Preference number: 3 (lower is better)
Translates to: RLTQWPRPCHTQ*GQSEEHGHRSG
Trigger: GCCTGAGCGGTGACCGTGCTCCTCTGATTGTCCTCACTGCGTGTGACAAGGCCTGGGCCACTGTGTGAGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp CTCTCAGAGTTCTGTCTTCACCCACTGAATCCGAAGTaGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: LSEFCLHPLNPK*MRVALPQGGLA
Trigger: GGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGGTGAAGACAGAACTCTGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CCA 72 bp CCAAGGTTGGTTTTCCCAACAACCAGGGGGAAGGTGTaGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCA +
Preference number: 3 (lower is better)
Translates to: PRLVFPTTRGKV*ANLAAGRASSS
Trigger: TGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGGTTGTTGGGAAAACCAACCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp CCTCCCGGGTCCAGCTCCCAGCAATGCTGTGCCGGGTaGACAGAGCTGAGGTTCATGGTCACTGAGTTGCTG +
Preference number: 3 (lower is better)
Translates to: PPGSSSQQCCAG*TELRFMVTELL
Trigger: CAGCAACTCAGTGACCATGAACCTCAGCTCTGTCCACCCGGCACAGCATTGCTGGGAGCTGGACCCGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp CGTGGAGCTCATGAGAGCTCCTGGATCTTCACCGGGGAGGTGCTATCTCCTGCCACAGTGGCCCAGGCCTaGTCACACGCAGTGAGGACA +
Preference number: 3 (lower is better)
Translates to: RGAHESSWIFTGEVLSPATVAQA*SHAVRT
Trigger: TGTCCTCACTGCGTGTGACAAGGCCTGGGCCACTGT...GGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp CCAGCTCCCAGCAATGCTGTGCCGGGTGGACAGAGCTaGGGTTCATGGTCACTGAGTTGCTGCCTGAAGGGC +
Preference number: 3 (lower is better)
Translates to: PAPSNAVPGGQS*GSWSLSCCLKG
Trigger: GCCCTTCAGGCAGCAACTCAGTGACCATGAACCTCAGCTCTGTCCACCCGGCACAGCATTGCTGGGAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp ATGTTTCTGACATCATGGCGTGTGCTCCTTGGGGACTaGCCCTCCCACACGAGGGCAGGCCTGGCTGAAGGT +
Preference number: 3 (lower is better)
Translates to: MFLTSWRVLLGD*PSHTRAGLAEG
Trigger: ACCTTCAGCCAGGCCTGCCCTCGTGTGGGAGGGGCAGTCCCCAAGGAGCACACGCCATGATGTCAGAAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp GAAGAAGATGTTTCTGACATCATGGCGTGTGCTCCTTaGGGACTGCCCCTCCCACACGAGGGCAGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: EEDVSDIMACAP*GLPLPHEGRPG
Trigger: GCCAGGCCTGCCCTCGTGTGGGAGGGGCAGTCCCCAAGGAGCACACGCCATGATGTCAGAAACATCTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp ACGCCACCCACACATCTGCACAGACACCAGGCTTCATaGAGCGCAAGACGACTCACACAGTGGCCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: TPPTHLHRHQAS*SARRLTQWPRP
Trigger: AGGCCTGGGCCACTGTGTGAGTCGTCTTGCGCTCCATGAAGCCTGGTGTCTGTGCAGATGTGTGGGTGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGTACAGCCTAAAACTTaGTGCTCAGAGAAAAACCAG +
Preference number: 3 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTVQPKT*CSEKNQ
Trigger: CTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTAC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR TCA 72 bp GCGAGTCCCGCTCCAAGGCTTCAAGGCTTTGCAAGGTaGCTGACGTGGAGGCAGGGCTATTCGATGACGCGT +
Preference number: 3 (lower is better)
Translates to: ASPAPRLQGFAR*LTWRQGYSMTR
Trigger: ACGCGTCATCGAATAGCCCTGCCTCCACGTCAGTCACCTTGCAAAGCCTTGAAGCCTTGGAGCGGGACTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp GGTCCACGCGAGTCCCGCTCCAAGGCTTCAAGGCTTTaGAAGGTGACTGACGTGGAGGCAGGGCTATTCGAT +
Preference number: 3 (lower is better)
Translates to: GPRESRSKASRL*KVTDVEAGLFD
Trigger: ATCGAATAGCCCTGCCTCCACGTCAGTCACCTTGCAAAGCCTTGAAGCCTTGGAGCGGGACTCGCGTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp CGTGGAGCTCATGAGAGCTCCTGGATCTTCACCGGGGAGGTGCTATCTCCTGCCGCAATCACTCCTCATTaGCAAAGCACGGCTCCCATC +
Preference number: 3 (lower is better)
Translates to: RGAHESSWIFTGEVLSPAAITPH*QSTAPI
Trigger: GATGGGAGCCGTGCTTTGCAAATGAGGAGTGATTGC...GGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp CTGGGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATaGTTCGTGTACACTCCGCACACTCTCCACACACAC +
Preference number: 3 (lower is better)
Translates to: LGTECFMLSLRA*FVYTPHTLHTH
Trigger: GTGTGTGTGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp ATGGTAGCTGCCAGTACCGCCCACTGCAAACCAGCCTaGACCCAGGCCATAACCCAGCAACACAACTGCGAT +
Preference number: 3 (lower is better)
Translates to: MVAASTAHCKPA*TQAITQQHNCD
Trigger: ATCGCAGTTGTGTTGCTGGGTTATGGCCTGGGTGCAGGCTGGTTTGCAGTGGGCGGTACTGGCAGCTACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp ACAGAGACCTTGATGGTAGCTGCCAGTACCGCCCACTaGAAACCAGCCTGCACCCAGGCCATAACCCAGCAA +
Preference number: 3 (lower is better)
Translates to: TETLMVAASTAH*KPACTQAITQQ
Trigger: TTGCTGGGTTATGGCCTGGGTGCAGGCTGGTTTGCAGTGGGCGGTACTGGCAGCTACCATCAAGGTCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp GGGCCATCTTCCTCGAAGAAGATGTTTCTGACATCATaGCGTGTGCTCCTTGGGGACTGCCCCTCCCACACG +
Preference number: 3 (lower is better)
Translates to: GPSSSKKMFLTS*RVLLGDCPSHT
Trigger: CGTGTGGGAGGGGCAGTCCCCAAGGAGCACACGCCATGATGTCAGAAACATCTTCTTCGAGGAAGATGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp GCTTCCCTCCCAGTTTCTCCACAGCTGCTCCAGGCCTaGGACAAGCTTCTCACCTTCTGTGAGCTGGAAACC +
Preference number: 3 (lower is better)
Translates to: ASLPVSPQLLQA*DKLLTFCELET
Trigger: GGTTTCCAGCTCACAGAAGGTGAGAAGCTTGTCCCAGGCCTGGAGCAGCTGTGGAGAAACTGGGAGGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp TTGACCTGTGAGCAGCATGTGGGCTTGGAATCAGGCTaGACGGGCTTCCCTCCCAGTTTCTCCACAGCTGCT +
Preference number: 3 (lower is better)
Translates to: LTCEQHVGLESG*TGFPPSFSTAA
Trigger: AGCAGCTGTGGAGAAACTGGGAGGGAAGCCCGTCCAGCCTGATTCCAAGCCCACATGCTGCTCACAGGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp GGGAGGTGCTATCTCCTGCCTTGGCCATTCCAAGGTTaGTTTTCCCAACAACCAGGGGGAAGGTGTGGGCGA +
Preference number: 3 (lower is better)
Translates to: GRCYLLPWPFQG*FSQQPGGRCGR
Trigger: TCGCCCACACCTTCCCCCTGGTTGTTGGGAAAACCAACCTTGGAATGGCCAAGGCAGGAGATAGCACCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp AATAACATCCCATCAACAGCTGTGCACCGCGGTCCTTaGGGTTGGAGACCCGTTTGGAGGAGGCGGACGGAA +
Preference number: 3 (lower is better)
Translates to: NNIPSTAVHRGP*GWRPVWRRRTE
Trigger: TTCCGTCCGCCTCCTCCAAACGGGTCTCCAACCCCAAGGACCGCGGTGCACAGCTGTTGATGGGATGTTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAACCCTGTGGTGGGATTaGGGTAAACTCAGCTGTAAT +
Preference number: 3 (lower is better)
Translates to: HAAEALCGRQQHRAVVLATLWWD*GKLSCN
Trigger: ATTACAGCTGAGTTTACCCAAATCCCACCACAGGGT...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp TTACATGGCAGCAGTCCTGAAACACATGAAGATAGCTaGGGGCTCCGAGAGTCTGGCATGCCGACCCGCTGC +
Preference number: 3 (lower is better)
Translates to: LHGSSPETHEDS*GLRESGMPTRC
Trigger: GCAGCGGGTCGGCATGCCAGACTCTCGGAGCCCTCAGCTATCTTCATGTGTTTCAGGACTGCTGCCATGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp AATATAAGGAACGAGGCAGGGAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCG +
Preference number: 3 (lower is better)
Translates to: NIRNEAGRSRKS*GLRARSALHIP
Trigger: CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCCTGCCTCGTTCCTTATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR GCA 72 bp TTGGAGACCCGTTTGGAGGAGGCGGACGGAAGCATGTaGCACAGGCCTCCTGTTTGTAGCTTTCTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: LETRLEEADGSM*HRPPVCSFLPV
Trigger: GACAGGAAGAAAGCTACAAACAGGAGGCCTGTGGCACATGCTTCCGTCCGCCTCCTCCAAACGGGTCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp TCCCACACGAGGGCAGGCCTGGCTGAAGGTACACACTaGATGAAGGACAATGAGGAGGTAGAGCTGGGTACA +
Preference number: 3 (lower is better)
Translates to: SHTRAGLAEGTH*MKDNEEVELGT
Trigger: TGTACCCAGCTCTACCTCCTCATTGTCCTTCATCCAGTGTGTACCTTCAGCCAGGCCTGCCCTCGTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp TCCAGGCCTGGGACAAGCTTCTCACCTTCTGTGAGCTaGAAACCCCCTCTCTATAAAGTGGGGAACCACCCC +
Preference number: 3 (lower is better)
Translates to: SRPGTSFSPSVS*KPPLYKVGNHP
Trigger: GGGGTGGTTCCCCACTTTATAGAGAGGGGGTTTCCAGCTCACAGAAGGTGAGAAGCTTGTCCCAGGCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp CCACTGCACCCAGCAGGGGTTGAACTTTTTAAGCCAATTGCGGAAACATGCCCTTGCCTGTCCTTGGCCTaGAGGTTGGTCCTAGGGCTG +
Preference number: 3 (lower is better)
Translates to: PLHPAGVELFKPIAETCPCLSLA*RLVLGL
Trigger: CAGCCCTAGGACCAACCTCAAGGCCAAGGACAGGCA...AGGGCATGTTTCCGCAATTGGCTTAAAAAGTTCAACCCCTGCTGGGTGCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp GAGTTGCTGCCTGAAGGGCTCCAGACTCCAGATCCTTaGTCTTTCCACGTGGAGCTCATGAGAGCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: ELLPEGLQTPDP*SFHVELMRAPG
Trigger: TCCAGGAGCTCTCATGAGCTCCACGTGGAAAGATCAAGGATCTGGAGTCTGGAGCCCTTCAGGCAGCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp GAGCTCCTGGATCTTCACCGGGGAGGTGCTATCTCCTaGCTTGGCCATTCCAAGGTTGGTTTTCCCAACAAC +
Preference number: 3 (lower is better)
Translates to: ELLDLHRGGAIS*LGHSKVGFPNN
Trigger: GTTGTTGGGAAAACCAACCTTGGAATGGCCAAGGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp GAGCTCATGAGAGCTCCTGGATCTTCACCGGGGAGGTaGTATCTCCTGCCTTGGCCATTCCAAGGTTGGTTT +
Preference number: 3 (lower is better)
Translates to: ELMRAPGSSPGR*YLLPWPFQGWF
Trigger: AAACCAACCTTGGAATGGCCAAGGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp CTGTCCTTGGCCTTGAGGTTGGTCCTAGGGCTGGACTaGCCACACGGTGACTCTCTTTTGTCCTTTTTCAGC +
Preference number: 3 (lower is better)
Translates to: LSLALRLVLGLD*PHGDSLLSFFS
Trigger: GCTGAAAAAGGACAAAAGAGAGTCACCGTGTGGGCAGTCCAGCCCTAGGACCAACCTCAAGGCCAAGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp CCTGTAAAGGGCCATCTTCCTCGAAGAAGATGTTTCTaGCATCATGGCGTGTGCTCCTTGGGGACTGCCCCT +
Preference number: 3 (lower is better)
Translates to: PVKGHLPRRRCF*HHGVCSLGTAP
Trigger: AGGGGCAGTCCCCAAGGAGCACACGCCATGATGTCAGAAACATCTTCTTCGAGGAAGATGGCCCTTTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp AGACTCCAGATCCTTGATCTTTCCACGTGGAGCTCATaGGAGCTCCTGGATCTTCACCGGGGAGGTGCTATC +
Preference number: 3 (lower is better)
Translates to: RLQILDLSTWSS*ELLDLHRGGAI
Trigger: GATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACGTGGAAAGATCAAGGATCTGGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp GGAAACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTTTGGCCATTCCAAGGTaGGTTTTCCCAACAACCAGG +
Preference number: 3 (lower is better)
Translates to: GNMPYRPQPHLTLAEFSSLAIPR*VFPTTR
Trigger: CCTGGTTGTTGGGAAAACCAACCTTGGAATGGCCAA...AGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTCCAGACTCCAGATCCTaGATCTTTCCACGTGGAGCT +
Preference number: 3 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLPDSRS*IFPRGA
Trigger: AGCTCCACGTGGAAAGATCAAGGATCTGGAGTCTGG...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp AGGCTTTGCAAGGTGACTGACGTGGAGGCAGGGCTATTCGATGACGCGTCTATGGAGAAAAAGGGCATATaGTCTGCATGGTCTGGACCC +
Preference number: 3 (lower is better)
Translates to: RLCKVTDVEAGLFDDASMEKKGI*SAWSGP
Trigger: GGGTCCAGACCATGCAGACAATATGCCCTTTTTCTC...CATAGACGCGTCATCGAATAGCCCTGCCTCCACGTCAGTCACCTTGCAAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp CATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTaGATTCTCCTCTCTTCAGACTTGAAACTCCACATG +
Preference number: 3 (lower is better)
Translates to: HALSAPAPPNSC*ILLSSDLKLHM
Trigger: CATGTGGAGTTTCAAGTCTGAAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp ACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTaGAAAGCACGGCTCCCATCATTCCAGAACCCAAGA +
Preference number: 3 (lower is better)
Translates to: TSCQMSTQSLLI*KARLPSFQNPR
Trigger: TCTTGGGTTCTGGAATGATGGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp AAATGGTGTTTGGAGAAAAAGGGCATATTGTCTGCATaGTCTGGACCCTCCTCACTCTGGAGCCGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: KWCLEKKGILSA*SGPSSLWSRQP
Trigger: AGGCTGCCGGCTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp ATCATAGGCGGCCTGGATAAAATAGACTTGAACGACTaGAAGTCGAACACGCGGCTGAAGCACTGTGTGGCC +
Preference number: 3 (lower is better)
Translates to: IIGGLDKIDLND*KSNTRLKHCVA
Trigger: GGCCACACAGTGCTTCAGCCGCGTGTTCGACTTCCAGTCGTTCAAGTCTATTTTATCCAGGCCGCCTATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp GTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATaGTTAGCTCTGTTCAGTGTCACCGGTTGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: VSWRDPGTCRYS*LALFSVTGWFF
Trigger: AAAGAACCAACCGGTGACACTGAACAGAGCTAACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp CTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTaGATGGTCTGGACCCTCCTCACTCTGGAGCCGGCA +
Preference number: 3 (lower is better)
Translates to: LEMVFGEKGHIV*MVWTLLTLEPA
Trigger: TGCCGGCTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp CGCTTTGGTTATAAAATAACATCCCATCAACAGCTGTaGACCGCGGTCCTTGGGGTTGGAGACCCGTTTGGA +
Preference number: 3 (lower is better)
Translates to: RFGYKITSHQQL*TAVLGVGDPFG
Trigger: TCCAAACGGGTCTCCAACCCCAAGGACCGCGGTGCACAGCTGTTGATGGGATGTTATTTTATAACCAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp AAACTCCACATGTCCTTGAGTGTCCTGGAGAGACCCTaGGACGTGCCGTTATTCATGGTTAGCTCTGTTCAG +
Preference number: 3 (lower is better)
Translates to: KLHMSLSVLERP*DVPLFMVSSVQ
Trigger: CTGAACAGAGCTAACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTGGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp AGCTGCCAAGGGACATCTTGTCAAGGCCCTTTCATTTaGCCCTGTGGTGGGATTTGGGTAAACTCAGCTGTA +
Preference number: 3 (lower is better)
Translates to: SCQGTSCQGPFI*PCGGIWVNSAV
Trigger: TACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTCCCTTGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp ATGGTTAGCTCTGTTCAGTGTCACCGGTTGGTTCTTTaGTACTCCTCACCGATGCAGAGCAAAAACCCCGCT +
Preference number: 3 (lower is better)
Translates to: MVSSVQCHRLVL*YSSPMQSKNPA
Trigger: AGCGGGGTTTTTGCTCTGCATCGGTGAGGAGTATCAAAGAACCAACCGGTGACACTGAACAGAGCTAACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp TCCGAAGAGCCAGAAATAAAAAGCACAGGAGCCGCCTaGAGACTCTCAGAGTTCTGTCTTCACCCACTGAAT +
Preference number: 3 (lower is better)
Translates to: SEEPEIKSTGAA*RLSEFCLHPLN
Trigger: ATTCAGTGGGTGAAGACAGAACTCTGAGAGTCTGCAGGCGGCTCCTGTGCTTTTTATTTCTGGCTCTTCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR GCA 72 bp CTGTCTCAACATCTGCCTAGTACACAGCTGCTGCTTTaGTTGGGAATCGACTTTTCACTGTTGTGTGTCGGG +
Preference number: 3 (lower is better)
Translates to: LSQHLPSTQLLL*LGIDFSLLCVG
Trigger: CCCGACACACAACAGTGAAAAGTCGATTCCCAAGCAAAGCAGCAGCTGTGTACTAGGCAGATGTTGAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp CTCAACATCTGCCTAGTACACAGCTGCTGCTTTGCTTaGGAATCGACTTTTCACTGTTGTGTGTCGGGTACC +
Preference number: 3 (lower is better)
Translates to: LNICLVHSCCFA*ESTFHCCVSGT
Trigger: GGTACCCGACACACAACAGTGAAAAGTCGATTCCCAAGCAAAGCAGCAGCTGTGTACTAGGCAGATGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp CACATGTCCTTGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATGGTTCACGGTGACTCTCTTTaGTCCTTTTTCAGCTTTAAC +
Preference number: 3 (lower is better)
Translates to: HMSLSVLERPWDVPLFMVHGDSL*SFFSFN
Trigger: GTTAAAGCTGAAAAAGGACAAAAGAGAGTCACCGTG...AACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp TCACTGTTGTGTGTCGGGTACCTAGGAGGCGCATCCTaGCGTGGGTTTATGCATTTTGGAAGTAATTCACCT +
Preference number: 3 (lower is better)
Translates to: SLLCVGYLGGAS*RGFMHFGSNSP
Trigger: AGGTGAATTACTTCCAAAATGCATAAACCCACGTCAGGATGCGCCTCCTAGGTACCCGACACACAACAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp CAGAACCCAAGACACTGTCTCACAAAGACAGCTCTCTaGAAGGAACTGGGAAGTAACTTGAGTCCAGTCAGA +
Preference number: 3 (lower is better)
Translates to: QNPRHCLTKTAL*KELGSNLSPVR
Trigger: TCTGACTGGACTCAAGTTACTTCCCAGTTCCTTGCAGAGAGCTGTCTTTGTGAGACAGTGTCTTGGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCAAGGGGCTAGGGACATaGAGAGGGAAGAAACCCCTC +
Preference number: 3 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSKGLGT*RGKKPL
Trigger: GAGGGGTTTCTTCCCTCTCAATGTCCCTAGCCCCTT...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR-3UTR CAA 90 bp CACATGTCCTTGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATGGTTTGCTTGAAATGGTGTTaGGAGAAAAAGGGCATATTG +
Preference number: 3 (lower is better)
Translates to: HMSLSVLERPWDVPLFMVCLKWC*EKKGIL
Trigger: CAATATGCCCTTTTTCTCCAAACACCATTTCAAGCA...AACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp TCTTCCTGTCTCAACATCTGCCTAGTACACAGCTGCTaGTTTGCTTGGGAATCGACTTTTCACTGTTGTGTG +
Preference number: 3 (lower is better)
Translates to: SSCLNICLVHSC*FAWESTFHCCV
Trigger: CACACAACAGTGAAAAGTCGATTCCCAAGCAAAGCAGCAGCTGTGTACTAGGCAGATGTTGAGACAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATaGGGCTTCTGTGAATATAAGGAACGAGGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: NYQENNRNPVKL*GFCEYKERGRE
Trigger: CTCCCTGCCTCGTTCCTTATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR-3UTR CAA 90 bp TGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCGTGGTAGCCTGGAACGTACAGCCTAAAACTTaGTGCTCAGAGAAAAACCAG +
Preference number: 3 (lower is better)
Translates to: WWDLGKLSCNHHSVVAWNVQPKT*CSEKNQ
Trigger: CTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTAC...GTTCCAGGCTACCACGGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR GCA 72 bp CTTTCTTCCTGTCTCAACATCTGCCTAGTACACAGCTaGTGCTTTGCTTGGGAATCGACTTTTCACTGTTGT +
Preference number: 3 (lower is better)
Translates to: LSSCLNICLVHS*CFAWESTFHCC
Trigger: ACAACAGTGAAAAGTCGATTCCCAAGCAAAGCAGCAGCTGTGTACTAGGCAGATGTTGAGACAGGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp GACATCTTGTCAAGGCCCTTTCATTTGACCCTGTGGTaGGATTTGGGTAAACTCAGCTGTAATCATCATTCC +
Preference number: 3 (lower is better)
Translates to: DILSRPFHLTLW*DLGKLSCNHHS
Trigger: GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp AGGGACATCTTGTCAAGGCCCTTTCATTTGACCCTGTaGTGGGATTTGGGTAAACTCAGCTGTAATCATCAT +
Preference number: 3 (lower is better)
Translates to: RDILSRPFHLTL*WDLGKLSCNHH
Trigger: ATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CCA 72 bp CGTTATTCATGGTTAGCTCTGTTCAGTGTCACCGGTTaGTTCTTTGATACTCCTCACCGATGCAGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: RYSWLALFSVTG*FFDTPHRCRAK
Trigger: TTTTGCTCTGCATCGGTGAGGAGTATCAAAGAACCAACCGGTGACACTGAACAGAGCTAACCATGAATAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR TCA 72 bp TACACGCAAACTACCAGGAAAATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTGAATATAAGGAACGAG +
Preference number: 3 (lower is better)
Translates to: YTQTTRKITATQ*NYGASVNIRNE
Trigger: CTCGTTCCTTATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR TCA 72 bp TGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTaGGGTGTTATTTCCGAAAGAGTTAAAAATGGATGG +
Preference number: 3 (lower is better)
Translates to: CYKGLYKSTKLL*GVISERVKNGW
Trigger: CCATCCATTTTTAACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR GCA 72 bp ACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTaGTGTGAGGTGTTATTTCCGAAAGAGTTAAAAATG +
Preference number: 3 (lower is better)
Translates to: TLVTKVCTKARS*CEVLFPKELKM
Trigger: CATTTTTAACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGGCGCTCCCGCAGGGTaGCCTGGCCCCGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATGAPAG*PGPVDP
Trigger: TGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACCAGGCGCATGGTGCTaGTGCTGGGCGAACCGGGGC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATPGAWC*CWANRG
Trigger: GCCCCGGTTCGCCCAGCACCAGCACCATGCGCCTGG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACAGGGTCTTGTGCAGTaGCCTGCGCCCGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATQGLVQ*PAPAGP
Trigger: TGGCCCGGCGGGCGCAGGCCACTGCACAAGACCCTG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACGCGGATGGCCAGGCTaGTGGCCATCTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRGWPG*WPSPPG
Trigger: GCCTGGTGGAGATGGCCAGCAGCCTGGCCATCCGCG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATTCAGCGCGCTGGGCTaGCAGTCCCGCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATFSALG*QSRCTW
Trigger: CCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAACGTGGGACACTACGTaGGGCAGCCGCCGCCACTCG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATTWDTT*GSRRHS
Trigger: CGAGTGGCGGCGGCTGCCCCACGTAGTGTCCCACGT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTCCCGCAGGGTGGCCTaGCCCCGTGGATCCACGCCG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSRRVA*PRGSTP
Trigger: CGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCGCTCCCGCAGGGTaGCCTGGCCCCGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPGAPAG*PGPVDP
Trigger: TGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAACGCTCCTCTCGCCGTaGCTCTGTGAGGCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATTLLSP*LCEAGV
Trigger: GACGCCTGCCTCACAGAGTCACGGCGAGAGGAGCGT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATGCTGGCGGACATGGTaGACGAGGTCGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATCWRTW*TRSASV
Trigger: CACGCTGGCCGACCTCGTGCACCATGTCCGCCAGCA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAACGGCCAGCCGCCTCTaGTCGATGGTGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATTASRL*SMVTLG
Trigger: GCCCAGTGTCACCATCGAGCAGAGGCGGCTGGCCGT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCAGGCGCATGGTGCTaGTGCTGGGCGAACCGGGGC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPPGAWC*CWANRG
Trigger: GCCCCGGTTCGCCCAGCACCAGCACCATGCGCCTGG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCCCGTCCTCCATCCTaGCCGGCACCGCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVARPPS*PAPPGS
Trigger: TGACCCCGGCGGTGCCGGCCAGGATGGAGGACGGGC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGACCTGGTGGCTGGCTTaGGTTCCCCGCGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTTWWLA*VPRACT
Trigger: GGTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATCCCCGCCTTCGAACTaGGCGAGGTTGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSPPSN*ARLCRR
Trigger: CCGCCTGCACAACCTCGCCCAGTTCGAAGGCGGGGA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGGCGCTCCCGCAGGGTaGCCTGGCCCCGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDGAPAG*PGPVDP
Trigger: TGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCGAAGTGGATGCGTGTaGCGCTCCCGCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTRSGCV*RSRRVA
Trigger: GGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACGTGCAGGTAGCAGGTaGTGGCAGACACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRAGSR*WQTRPG
Trigger: ACCTGGGCGTGTCTGCCATCACCTGCTACCTGCACG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCGAGGTCGGCCAGCGTaGTGTAGGCGAGGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTRGRPA*CRRGAL
Trigger: TAAGGCCCCTCGCCTACAGCACGCTGGCCGACCTCG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAGCAGGGCCAGGAGCTaGAGGGGCAGTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVSRARS*RGSGHP
Trigger: GGGGTGCCCACTGCCCCTGCAGCTCCTGGCCCTGCT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGTCCAGGCGCATGGTaGTGGTGCTGGGCGAACCGG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPGPGAW*WCWANR
Trigger: CCGGTTCGCCCAGCACCAGCACCATGCGCCTGGACC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATGGCTCACCAGAGAGTaGTGGCTGGCCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATWLTRE*WLASQE
Trigger: CTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATCCAGCATGTCCGCCTaGTTCTCGGGGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSSMSA*FSGSRT
Trigger: GGTCCTGGACCCCGAGAAGCAGGCGGACATGCTGGA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTCTTGTGCAGTGGCCTaGGCCCGCCGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSCAVA*ARRARD
Trigger: GTCTCTGGCCCGGCGGGCGCAGGCCACTGCACAAGA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGCCAGGCGGGGTCCATaGGGCACAGATTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTARRGP*GTDCPG
Trigger: GCCTGGACAATCTGTGCCGCATGGACCCCGCCTGGC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCTGAGGGGCAGGTGCTaGCGGACATGGTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTLRGRC*RTWCTR
Trigger: CCTCGTGCACCATGTCCGCCAGCACCTGCCCCTCAG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAGCTGCAGGGGCAGTaGGCACCCCAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPELQGQ*APQAEL
Trigger: CAGCTCTGCCTGGGGTGCCCACTGCCCCTGCAGCTC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGCCCTGATGAGTGGCTaGGCACAGCGCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTALMSG*AQRSPE
Trigger: CTCTGGGCTGCGCTGTGCCCAGCCACTCATCAGGGC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATGCTGCTCCTCGGGGTaGCAGATGGCCAGGTATCCG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATCCSSG*QMARYP
Trigger: CGGATACCTGGCCATCTGCCACCCCGAGGAGCAGCA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCAGGGGGAAGGTGTGGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCACCAGACGTGGGACACTACGTaGGGCAGCCGCCGCCACTCG +
Preference number: 4 (lower is better)
Translates to: PGGRCGRTWQQAGPLPHQTWDTT*GSRRHS
Trigger: CGAGTGGCGGCGGCTGCCCCACGTAGTGTCCCACGT...CTGGTGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGAGGCGTGTGCACGTaGGACACTACGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRGVCT*DTTWGS
Trigger: GCTGCCCCACGTAGTGTCCCACGTGCACACGCCTCT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCAGGGTCTTGTGCAGTaGCCTGCGCCCGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVQGLVQ*PAPAGP
Trigger: TGGCCCGGCGGGCGCAGGCCACTGCACAAGACCCTG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCAGGGTCTTGTGCAGTaGCCTGCGCCCGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDQGLVQ*PAPAGP
Trigger: TGGCCCGGCGGGCGCAGGCCACTGCACAAGACCCTG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACCTTCACATTCCGGGTaGCCGTGGCGGCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATPSHSG*PWRPQS
Trigger: TGACTGTGGCCGCCACGGCCACCCGGAATGTGAAGG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGAAGTCACGGCGTCCTaGGAGCCCCAGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATEVTAS*EPQRML
Trigger: CAGCATCCTCTGGGGCTCCCAGGACGCCGTGACTTC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGCCACAGAGCCTGCATaGGCTCTGCGCGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDATEPA*ALRAPA
Trigger: AGCCGGTGCGCGCAGAGCTCATGCAGGCTCTGTGGC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGCCCCTCCTCCACAATaGTCTTCCGGGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTAPPPQ*SSGSSG
Trigger: CCCACTGGACCCGGAAGATCATTGTGGAGGAGGGGC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACAGCTCGCTTGTACCTaGGGTGGCTTCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATQLACT*GGFGAS
Trigger: GGAAGCACCGAAGCCACCTCAGGTACAAGCGAGCTG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCAGCGCCCACTCCTTaGGCATGCTGCGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVAAPTP*ACCAAP
Trigger: TGGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCGAGGTCGGCCAGCGTaGTGTAGGCGAGGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPRGRPA*CRRGAL
Trigger: TAAGGCCCCTCGCCTACAGCACGCTGGCCGACCTCG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCTGGCGGACATGGTaGACGAGGTCGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPCWRTW*TRSASV
Trigger: CACGCTGGCCGACCTCGTGCACCATGTCCGCCAGCA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAGCAGGGCCAGGAGCTaGAGGGGCAGTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVASRARS*RGSGHP
Trigger: GGGGTGCCCACTGCCCCTGCAGCTCCTGGCCCTGCT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCTGTGCTGGGCTGGCTaGCCACCTGGTAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTLCWAG*PPGSKA
Trigger: TGCCTTGCTACCAGGTGGGCAGCCAGCCCAGCACAG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTCCAGCATGTCCGCCTaGTTCTCGGGGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTSSMSA*FSGSRT
Trigger: GGTCCTGGACCCCGAGAAGCAGGCGGACATGCTGGA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATCGATGAAGCTGAGCTaGTGCTCCTCGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSMKLS*CSSGWQ
Trigger: CTGCCACCCCGAGGAGCAGCAGCTCAGCTTCATCGA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCCAGGCGGGGTCCATaGGGCACAGATTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPARRGP*GTDCPG
Trigger: GCCTGGACAATCTGTGCCGCATGGACCCCGCCTGGC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCAGGGGCTCTCGGAATaGACTCCCCGCCTCGATCAG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTQGLSE*TPRLDQ
Trigger: CTGATCGAGGCGGGGAGTCCATTCCGAGAGCCCCTG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGGGAGCATGGCTCCTTaGCAGCTGGTGCCAATGGGG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTGSMAP*QLVPMG
Trigger: CCCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTCAGCGCGCTGGGCTaGCAGTCCCGCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVFSALG*QSRCTW
Trigger: CCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTTCAGCGCGCTGGGCTaGCAGTCCCGCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDFSALG*QSRCTW
Trigger: CCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGCAGTTCAGCGCGCTaGGCTGGCAGTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSSSAR*AGSPAA
Trigger: TGCAGCGGGACTGCCAGCCCAGCGCGCTGAACTGCT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAGCAGTTCAGCGCGCTaGGCTGGCAGTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSSSAR*AGSPAA
Trigger: TGCAGCGGGACTGCCAGCCCAGCGCGCTGAACTGCT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGACCTGGTGGCTGGCTTaGGTTCCCCGCGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVTWWLA*VPRACT
Trigger: GGTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCCTTCACATTCCGGGTaGCCGTGGCGGCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTPSHSG*PWRPQS
Trigger: TGACTGTGGCCGCCACGGCCACCCGGAATGTGAAGG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGTGGCCTGGCCCCGTaGATCCACGCCGAACGCTCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVGGLAP*IHAERS
Trigger: TGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGCCGCACAGGGACGGTaGGACACAGCTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTAAQGR*DTAPQR
Trigger: TCTTTGTGGAGCTGTGTCTCACCGTCCCTGTGCGGC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCCCTCCTCCACAATaGTCTTCCGGGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPAPPPQ*SSGSSG
Trigger: CCCACTGGACCCGGAAGATCATTGTGGAGGAGGGGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCAGCTCGCTTGTACCTaGGGTGGCTTCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTQLACT*GGFGAS
Trigger: GGAAGCACCGAAGCCACCTCAGGTACAAGCGAGCTG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR TCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGCTGAACGAAAGCGCTaGGCAGCGCTCCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATAERKR*AALQSS
Trigger: TGAAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCCTGCTGCGGCGGGGTaGTGCTCTCCTGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTPAAAG*CSPAHK
Trigger: TTTATGAGCAGGAGAGCATCACCCCGCCGCAGCAGG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCGTGCAGGTAGCAGGTaGTGGCAGACACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPRAGSR*WQTRPG
Trigger: ACCTGGGCGTGTCTGCCATCACCTGCTACCTGCACG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGATCAGGCCGCCATTCTaGGAGTCCCGCACGCCGACC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVIRPPF*ESRTPT
Trigger: GGTCGGCGTGCGGGACTCTCAGAATGGCGGCCTGAT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGGACGTCTCTCCCATTaGCACTCTCCTGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATGRLSH*HSPARS
Trigger: AGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGGTTCCTTGGCAGTCTaGGCGAGCTCCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATGSLAV*ASSIEL
Trigger: CAGCTCTATGGAGCTCGCGCAGACTGCCAAGGAACC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAAGAAAGGGCCACACTaGTGGGCGACTGCCACCATC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATKKGPH*WATATI
Trigger: GATGGTGGCAGTCGCCCAGCAGTGTGGCCCTTTCTT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACACCGCATCAGAAGCTaGTCCAGCGTGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATHRIRS*SSVVFA
Trigger: GGCAAAGACCACGCTGGAGCAGCTTCTGATGCGGTG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGACCTGGGCCAACACCTaGAGCGAATGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTTWANT*SECMAC
Trigger: GCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGGTCCAGGCGCATGGTaGTGGTGCTGGGCGAACCGG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAGPGAW*WCWANR
Trigger: CCGGTTCGCCCAGCACCAGCACCATGCGCCTGGACC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAGTGTCCGCTGTACTTaGAGGCTGGGTCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTSVRCT*RLGPRR
Trigger: CCTGCGTGGACCCAGCCTGCAAGTACAGCGGACACT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGTCAGCATCTGGTaGCCGTCCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPWVSIW*PSSILA
Trigger: GGCCAGGATGGAGGACGGGCACCAGATGCTGACCCA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTGGGTCAGCATCTGGTaGCCGTCCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWWVSIW*PSSILA
Trigger: GGCCAGGATGGAGGACGGGCACCAGATGCTGACCCA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGAATCCAGTATCTCCTaGTGCGGCGGGGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATESSIS*CGGVML
Trigger: GAGCATCACCCCGCCGCAGCAGGAGATACTGGATTC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCAGACACGCCCAGGTaGAGCTGCCGCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPADTPR*SCRSFT
Trigger: TGTGAAGGAGCGGCAGCTGCACCTGGGCGTGTCTGC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTCCATGTTCTCTGGCTaGCCGGCGGCCGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWSMFSG*PAAERG
Trigger: TCCTCTCTCGGCCGCCGGGCAGCCAGAGAACATGGA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCCAGGCGGGGTCCATaGGGCACAGATTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVARRGP*GTDCPG
Trigger: GCCTGGACAATCTGTGCCGCATGGACCCCGCCTGGC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRSRKS*GLRARS
Trigger: GCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATTGCAGGACATGGTCTaGATGCTGCTGGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLQDMV*MLLGRD
Trigger: GTCCCTGCCCAGCAGCATCCAGACCATGTCCTGCAA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGAGCTGCAGGGGCAGTaGGCACCCCAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAELQGQ*APQAEL
Trigger: CAGCTCTGCCTGGGGTGCCCACTGCCCCTGCAGCTC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGTGGCGGATCAAGCTaGCGACAAAGGGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSGGSS*RQRAGR
Trigger: GCGCCCTGCCCTTTGTCGCCAGCTTGATCCGCCACT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACCTGCAGCGAATGCATaGCCTGCTTCCTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATPAANA*PASSQW
Trigger: CCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGCATGGTGCTGGTGCTaGGCGAACCGGGGCGCACAG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAAWCWC*ANRGAQ
Trigger: CTGTGCGCCCCGGTTCGCCCAGCACCAGCACCATGC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGGTCCACGCAGGCCTTaGAGAGCAGGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAGPRRP*RAGRAR
Trigger: CCTGGCCCTGCCTGCTCTCCAAGGCCTGCGTGGACC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGATCTTCCGGGTCCAGTaGGTCAGCATCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTIFRVQ*VSIWCP
Trigger: CGGGCACCAGATGCTGACCCACTGGACCCGGAAGAT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAATCAGGTGCAGAATGTaGACCAGCTGCGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATIRCRM*TSCGTV
Trigger: CACCGTCCCGCAGCTGGTCCACATTCTGCACCTGAT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGGGTCCCGAAGAGCTaGGAGGGATTGGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRVPKS*EGLALV
Trigger: CACCAATGCCAATCCCTCCCAGCTCTTCGGGACCCT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCCCTGATGAGTGGCTaGGCACAGCGCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVALMSG*AQRSPE
Trigger: CTCTGGGCTGCGCTGTGCCCAGCCACTCATCAGGGC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGGGTCGGATGGGGATTaGCGGCACGCACTGGGACAT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPGSDGD*RHALGH
Trigger: ATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGACGCAGGGTCGGATaGGGATTGGCGGCACGCACT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVGRRVG*GLAART
Trigger: AGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCCTCGGGGTGGCAGATaGCCAGGTATCCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWPRGGR*PGIRGT
Trigger: TGTACCGCGGATACCTGGCCATCTGCCACCCCGAGG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGATGGCCAGGCTGCTaGCCATCTCCACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVGWPGC*PSPPGA
Trigger: AGCGCCTGGTGGAGATGGCCAGCAGCCTGGCCATCC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGGATGGCCAGGCTGCTaGCCATCTCCACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDGWPGC*PSPPGA
Trigger: AGCGCCTGGTGGAGATGGCCAGCAGCCTGGCCATCC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGTCGTCAGACACGATaGGCAGTCGGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSRQTR*AVGSSR
Trigger: CCTGGAGGAACCGACTGCCCATCGTGTCTGACGACT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCAGGTGAGCAGCTGTaGGATCCAGGCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPAGEQL*DPGQPL
Trigger: CAGTGGCTGGCCTGGATCCCACAGCTGCTCACCTGC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCAGGTGAGCAGCTGTaGGATCCAGGCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWAGEQL*DPGQPL
Trigger: CAGTGGCTGGCCTGGATCCCACAGCTGCTCACCTGC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGGCTGCAGCGCCACATaGGTGCTGTTGCTCTTATGG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATGCSAT*VLLLLW
Trigger: CCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGGGCGTGAGTCGAAATaGGACAGGACGGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATGRESK*DRTVGI
Trigger: GATGCCAACCGTCCTGTCCCATTTCGACTCACGCCC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGGCGACCGCAATCATaGACGCTGTCAACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVGRPQS*TLSTGR
Trigger: CCGGCCCGTTGACAGCGTCCATGATTGCGGTCGCCC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGCGCTCCCGCAGGGTaGCCTGGCCCCGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPGAPAG*PGPVDP
Trigger: TGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATAGGTGTGGGCGAACCTaGCAGCAGGCCGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDRCGRT*QQAGPL
Trigger: AAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCCGCACAGGGACGGTaGGACACAGCTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWAAQGR*DTAPQR
Trigger: TCTTTGTGGAGCTGTGTCTCACCGTCCCTGTGCGGC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCCGCACAGGGACGGTaGGACACAGCTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPAAQGR*DTAPQR
Trigger: TCTTTGTGGAGCTGTGTCTCACCGTCCCTGTGCGGC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCGGAAAACTCCACAGTaGTGCTGGGGCCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTRKTPQ*CWGPEP
Trigger: AGGTTCAGGGCCCCAGCATCACTGTGGAGTTTTCCG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGGCTTCACCAGTGTCTaGGGAGCAGCCGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPGFTSV*GAAGIR
Trigger: TCTGATCCCGGCTGCTCCTCAGACACTGGTGAAGCC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCGGCTGCTGGTCCTTaGTCCTCTGCAGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDPAAGP*SSAAPT
Trigger: AGTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTCCCGCTGCACCTGGTaGCTGCCGCTGCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSRCTW*LPLHRN
Trigger: ATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCCTGCTGCGGCGGGGTaGTGCTCTCCTGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWPAAAG*CSPAHK
Trigger: TTTATGAGCAGGAGAGCATCACCCCGCCGCAGCAGG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCCTGCTGCGGCGGGGTaGTGCTCTCCTGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPPAAAG*CSPAHK
Trigger: TTTATGAGCAGGAGAGCATCACCCCGCCGCAGCAGG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGGACGAGGTAGGGGTTaGTGTGGCCTTTGGACTGAC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTGRGRG*CGLWTD
Trigger: GTCAGTCCAAAGGCCACATCAACCCCTACCTCGTCC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGATTTGCTCTCGTTCTaGTGCCGGCAGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPDLLSF*CRQACR
Trigger: CCTGCACGCCTGCCGGCATCAGAACGAGAGCAAATC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGAGCCAGCTGGATGGTaGACATCTTCCGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTEPAGW*TSSGTS
Trigger: GGACGTTCCGGAAGATGTTCACCATCCAGCTGGCTC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTGCTGGCGGACATGGTaGACGAGGTCGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVACWRTW*TRSASV
Trigger: CACGCTGGCCGACCTCGTGCACCATGTCCGCCAGCA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGGACATGGTCTGGATaGTGCTGGGCAGGGACTCAT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRTWSG*CWAGTH
Trigger: ATGAGTCCCTGCCCAGCAGCATCCAGACCATGTCCT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCACCCCAGGCAGAGCTaGTTCCACGGCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPHPRQS*FHGSKF
Trigger: GAACTTGGAGCCGTGGAAGCAGCTCTGCCTGGGGTG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCGCCTGTCAGGGCCTaGTCAAAAGTCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWAPVRA*SKVFRA
Trigger: AGCCCGGAAGACTTTTGAGCAGGCCCTGACAGGCGC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCACCTGGGCCAACACCTaGAGCGAATGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPTWANT*SECMAC
Trigger: GCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGCGCATGGTGCTGGTaGTGGGCGAACCGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPGAWCW*WANRGA
Trigger: TGCGCCCCGGTTCGCCCAGCACCAGCACCATGCGCC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGTGTCCGCTGTACTTaGAGGCTGGGTCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSVRCT*RLGPRR
Trigger: CCTGCGTGGACCCAGCCTGCAAGTACAGCGGACACT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAGTGTCCGCTGTACTTaGAGGCTGGGTCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWSVRCT*RLGPRR
Trigger: CCTGCGTGGACCCAGCCTGCAAGTACAGCGGACACT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAAGCCCAGCCTCTaGATGGCGCTCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPVKPSL*MALTMC
Trigger: GCACATGGTGAGCGCCATGCAGAGGCTGGGCTTCAC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCTGAGGTGGCTTCGGTaGTTCCTGACGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPLRWLR*FLTLPE
Trigger: CTCAGGCAGCGTCAGGAAGCACCGAAGCCACCTCAG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTCGATGAAGCTGAGCTaGTGCTCCTCGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSMKLS*CSSGWQ
Trigger: CTGCCACCCCGAGGAGCAGCAGCTCAGCTTCATCGA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATAAAGACAGGGTCTTGTaGAGTGGCCTGCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDKDRVL*SGLRPP
Trigger: CGGCGGGCGCAGGCCACTGCACAAGACCCTGTCTTT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGTACAGCCGCCGGGCTaGGGTGTTGTGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDVQPPG*GVVLLH
Trigger: GTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTAC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGAAGGTTCTGTGGCCTaGGGCAGAGGTCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWEGSVA*GRGPER
Trigger: CCTCTCTGGACCTCTGCCGCAGGCCACAGAACCTTC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGTCCTAGGGCTGGACTaGCCACACGGTGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTVLGLD*PHGDSL
Trigger: AAGAGAGTCACCGTGTGGGCAGTCCAGCCCTAGGAC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCTGAGGGGCAGGTGCTaGCGGACATGGTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVALRGRC*RTWCTR
Trigger: CCTCGTGCACCATGTCCGCCAGCACCTGCCCCTCAG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGTTGTAGGGTTCCTTaGCAGTCTGCGCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSCRVP*QSARAP
Trigger: TGGAGCTCGCGCAGACTGCCAAGGAACCCTACAACT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAGTGGCGGATCAAGCTaGCGACAAAGGGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVSGGSS*RQRAGR
Trigger: GCGCCCTGCCCTTTGTCGCCAGCTTGATCCGCCACT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCCTGCAGCGAATGCATaGCCTGCTTCCTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTPAANA*PASSQW
Trigger: CCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTTGATGGCCTGGAACTaGAGGTCCAGGCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTLMAWN*RSRRMV
Trigger: CACCATGCGCCTGGACCTCCAGTTCCAGGCCATCAA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCTCACCAGAGAGTGCTaGCTGGCCAGCCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWLTREC*LASQES
Trigger: TGACTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGGTCGGATGGGGATTaGCGGCACGCACTGGGACAT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVGSDGD*RHALGH
Trigger: ATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAACTCAGAGGCTGCGCTaGAGAACATGGTCGAGACGT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATTQRLR*RTWSRR
Trigger: ACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCACGAGGCGCATCTGTaGGGAAACTGCCACAACCCG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWHEAHL*GNCHNP
Trigger: CGGGTTGTGGCAGTTTCCCCACAGATGCGCCTCGTG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATATGTCGCGGAGGACCTaGTGGCTGGCTTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDMSRRT*WLAWVP
Trigger: GGGAACCCAAGCCAGCCACCAGGTCCTCCGCGACAT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGCTGTCCATGTTCTCTaGCTGCCCGGCGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAAVHVL*LPGGRE
Trigger: CTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCACTGAATCCGAAGTaGATGCGTGTGGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPPLNPK*MRVALP
Trigger: CGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGGCTTCACCAGTGTCTaGGGAGCAGCCGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDGFTSV*GAAGIR
Trigger: TCTGATCCCGGCTGCTCCTCAGACACTGGTGAAGCC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGTCGAGTCAGGAACTTaGTCAGGGGCTCTCGGAATG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTVESGT*SGALGM
Trigger: CATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGAC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGCCCCTCCTCCACAATaGTCTTCCGGGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAAPPPQ*SSGSSG
Trigger: CCCACTGGACCCGGAAGATCATTGTGGAGGAGGGGC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTCCCAAAGACTGCACTaGTGGCTCCGGTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVASQRLH*WLRWPS
Trigger: GGACGGCCACCGGAGCCATCAGTGCAGTCTTTGGGA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCTTCCTGACGCTGCCTaGGGGTTTAAATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPLPDAA*GFKCSR
Trigger: CCGGGAGCATTTAAACCCTCAGGCAGCGTCAGGAAG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCTTCCTGACGCTGCCTaGGGGTTTAAATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPLPDAA*GFKCSR
Trigger: CCGGGAGCATTTAAACCCTCAGGCAGCGTCAGGAAG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGACGAGGTAGGGGTTaGTGTGGCCTTTGGACTGAC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPGRGRG*CGLWTD
Trigger: GTCAGTCCAAAGGCCACATCAACCCCTACCTCGTCC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCTCGCTGCATGTGCATaGTTCGGCTGCAGCGCCACA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLAACA*FGCSAT
Trigger: TGTGGCGCTGCAGCCGAATCATGCACATGCAGCGAG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACCTGTTGGAGCTGCCTaGGAACCTCTTCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATPVGAA*EPLHAN
Trigger: ATTGGCATGAAGAGGTTCTCAGGCAGCTCCAACAGG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGGCACCATGTTACTCTaGACCTCCTTGAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATGTMLL*TSLRMS
Trigger: CGACATCCTCAAGGAGGTTCAGAGTAACATGGTGCC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGGACTGGTTACCCACTaGACTTGGCTGCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWGLVTH*TWLLLS
Trigger: GGACAGCAGCAGCCAAGTTCAGTGGGTAACCAGTCC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCAGGGGGAAGGTGTGGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCACCAGGGTGGAGACGTTCGATaGAGAAAGGAGGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGGRCGRTWQQAGPLPHQGGDVR*RKEGQA
Trigger: AGCCTGGCCCTCCTTTCTTCATCGAACGTCTCCACC...CTGGTGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGACATGGTCTGGATGCTaGTGGGCAGGGACTCATCGT +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTTWSGC*WAGTHR
Trigger: ACGATGAGTCCCTGCCCAGCAGCATCCAGACCATGT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAGGACATGGTCTGGATaGTGCTGGGCAGGGACTCAT +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTRTWSG*CWAGTH
Trigger: ATGAGTCCCTGCCCAGCAGCATCCAGACCATGTCCT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCACCCCAGGCAGAGCTaGTTCCACGGCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDHPRQS*FHGSKF
Trigger: GAACTTGGAGCCGTGGAAGCAGCTCTGCCTGGGGTG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAGCCTGCATGAGCTCTaGGCGCACCGGCTGGATGTG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVASLHEL*AHRLDV
Trigger: CACATCCAGCCGGTGCGCGCAGAGCTCATGCAGGCT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTGCTGTCAGCAGGGTTaGGTAAGGTGCGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPCCQQG*VRCATE
Trigger: CTCTGTGGCGCACCTTACGCAACCCTGCTGACAGCA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGGCCACGTGGGAGATaGTGTCAGCAGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPRPRGR*CQQGCV
Trigger: TACGCAACCCTGCTGACAGCATCTCCCACGTGGCCT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATGTAAAGTTGGGGTGTaGCAGGAGCTGGTAGAGTGC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATCKVGV*QELVEC
Trigger: GCACTCTACCAGCTCCTGGCACACCCCAACTTTACA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTGAAGCCCAGCCTCTaGATGGCGCTCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVVKPSL*MALTMC
Trigger: GCACATGGTGAGCGCCATGCAGAGGCTGGGCTTCAC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGACCTTTCCGACGGCTaGGTAGAGGCACTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVDLSDG*VEALQL
Trigger: GAGCTGGAGTGCCTCTACGCAGCCGTCGGAAAGGTC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCTCCATGCTCATCACTaGCAGGCGCGTCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWLHAHH*QARLHQ
Trigger: CTGGTGAAGACGCGCCTGGCAGTGATGAGCATGGAG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCTCCATGCTCATCACTaGCAGGCGCGTCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPLHAHH*QARLHQ
Trigger: CTGGTGAAGACGCGCCTGGCAGTGATGAGCATGGAG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTCTTCCGCATCTCCATaGTCATCACTGCCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSSASP*SSLPGA
Trigger: CGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTGCCAATGGGGGTaGTCTTCTCACACACGGCCA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPWCQWG*SSHTRP
Trigger: TGGCCGTGTGTGAGAAGAGCACCCCCATTGGCACCA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTGGTGCCAATGGGGGTaGTCTTCTCACACACGGCCA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPWCQWG*SSHTRP
Trigger: TGGCCGTGTGTGAGAAGAGCACCCCCATTGGCACCA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCCGCGAGTGCATGCTaGTGTCTGTCAGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPPASAC*CLSERI
Trigger: GATCCTCTCTGACAGACAGCAGCATGCACTCGCGGG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTCACCCGCGAGTGCATaGTGCTGTCTGTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSPASA*CCLSER
Trigger: CCTCTCTGACAGACAGCAGCATGCACTCGCGGGTGA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCTGCACCTGGTGACTaGCGCTGCACAGAAATGGAC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPAAPGD*RCTEMD
Trigger: GTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCTGCACCTGGTGACTaGCGCTGCACAGAAATGGAC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWAAPGD*RCTEMD
Trigger: GTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGAATCCAGTATCTCCTaGTGCGGCGGGGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWESSIS*CGGVML
Trigger: GAGCATCACCCCGCCGCAGCAGGAGATACTGGATTC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTCGATGAAGCTGAGCTaGTGCTCCTCGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSMKLS*CSSGWQ
Trigger: CTGCCACCCCGAGGAGCAGCAGCTCAGCTTCATCGA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTGTAGGAGAGGCGTGTaGACGTGGGACACTACGTGG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPCRRGV*TWDTTW
Trigger: CCACGTAGTGTCCCACGTGCACACGCCTCTCCTACA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGCAGCGCCACATGGGTaGTGTTGCTCTTATGGGCCC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDAAPHG*CCSYGP
Trigger: GGGCCCATAAGAGCAACAGCACCCATGTGGCGCTGC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAGCTCTCGCTGCATGTaGATGATTCGGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSSRCM*MIRLQR
Trigger: GCGCTGCAGCCGAATCATGCACATGCAGCGAGAGCT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGGTGGAGCTCTCGCTaGATGTGCATGATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPGWSSR*MCMIRL
Trigger: CAGCCGAATCATGCACATGCAGCGAGAGCTCCACCC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAAAGACAGGGTCTTGTaGAGTGGCCTGCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAKDRVL*SGLRPP
Trigger: CGGCGGGCGCAGGCCACTGCACAAGACCCTGTCTTT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCATCTGTGGGGAAACTaGCACAACCCGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPHLWGN*HNPGHC
Trigger: ACAGTGCCCCGGGTTGTGGCAGTTTCCCCACAGATG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGGTTGTCATGCTCGATaGCCTTCTTGGCGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPGCHAR*PSWRSA
Trigger: AGCGCTGCGCCAAGAAGGGCATCGAGCATGACAACC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPRSRKS*GLRARS
Trigger: GCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCAGTTTCTCCACAGCTaGTCCAGGCCTGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPQFLHS*SRPGTS
Trigger: GCTTGTCCCAGGCCTGGAGCAGCTGTGGAGAAACTG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTGGTCTGGATGCTGCTaGGCAGGGACTCATCGTCGA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWWSGCC*AGTHRR
Trigger: TCGACGATGAGTCCCTGCCCAGCAGCATCCAGACCA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTTGCAGGACATGGTCTaGATGCTGCTGGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPLQDMV*MLLGRD
Trigger: GTCCCTGCCCAGCAGCATCCAGACCATGTCCTGCAA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGGAGCTTGCAGGACATaGTCTGGATGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWGACRT*SGCCWA
Trigger: TGCCCAGCAGCATCCAGACCATGTCCTGCAAGCTCC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAAAGGGCCACACTGCTaGGCGACTGCCACCATCGTA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPKGPHC*ATATIV
Trigger: TACGATGGTGGCAGTCGCCCAGCAGTGTGGCCCTTT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAAACATGGCTGTGCTaGGCTGGCTGCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVETWLC*AGCPPG
Trigger: ACCAGGTGGGCAGCCAGCCCAGCACAGCCATGTTTC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATGGAAAGACTTTTCCTaGGCGGCCACGATCTCTTCG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATWKDFS*AATISS
Trigger: CGAAGAGATCGTGGCCGCCCAGGAAAAGTCTTTCCA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCTGGGCTGCAACGTaGTACAGAACGTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPAWAAT*YRTCSP
Trigger: AGGGGAACACGTTCTGTACCACGTTGCAGCCCAGGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGCTCCTTCCAGTTGGTaGCTGCCATGTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTAPSSW*LPCSPC
Trigger: GCAAGGAGAACATGGCAGCCACCAACTGGAAGGAGC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGATCTTCCGGGTCCAGTaGGTCAGCATCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVIFRVQ*VSIWCP
Trigger: CGGGCACCAGATGCTGACCCACTGGACCCGGAAGAT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAGCCCAGCCTCTGCATaGCGCTCACCATGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVSPASA*RSPCAA
Trigger: TGCAGCACATGGTGAGCGCCATGCAGAGGCTGGGCT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATAGCCCAGCCTCTGCATaGCGCTCACCATGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSPASA*RSPCAA
Trigger: TGCAGCACATGGTGAGCGCCATGCAGAGGCTGGGCT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCTCCAGGTAGCGACTaGCTCCTCCCAAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWAPGSD*LLPKTA
Trigger: TGCAGTCTTTGGGAGGAGCCAGTCGCTACCTGGAGC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCTTGGGCCACATGTCTaGCCGCAACGCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPLGPHV*PQRSLQ
Trigger: CTGAAGACTGCGTTGCGGCCAGACATGTGGCCCAAG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCTTGGGCCACATGTCTaGCCGCAACGCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPLGPHV*PQRSLQ
Trigger: CTGAAGACTGCGTTGCGGCCAGACATGTGGCCCAAG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCGCGAGAGAAGGCTGTaGACGGCTCGCAACACCTTG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVRERRL*TARNTL
Trigger: CAAGGTGTTGCGAGCCGTCCACAGCCTTCTCTCGCG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCGCTTGTACCTGAGGTaGCTTCGGTGCTTCCTGACG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPRLYLR*LRCFLT
Trigger: CGTCAGGAAGCACCGAAGCCACCTCAGGTACAAGCG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGAAGTGGTTCCCCATaGCTTCCCAGTTCTGCGAAC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRSGSP*LPSSAN
Trigger: GTTCGCAGAACTGGGAAGCCATGGGGAACCACTTCT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATGCTTGATCCAGAAGTaGTTCCCCATGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATCLIQK*FPMASQ
Trigger: CTGGGAAGCCATGGGGAACCACTTCTGGATCAAGCA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGGCAGCTGGTGCCAATaGGGGTGCTCTTCTCACACA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWGSWCQ*GCSSHT
Trigger: TGTGTGAGAAGAGCACCCCCATTGGCACCAGCTGCC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGCCGCTGCACAGAAATaGACTTATCTCACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTAAAQK*TYLTRE
Trigger: CTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTTCAGCGCGCTGGGCTaGCAGTCCCGCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPFSALG*QSRCTW
Trigger: CCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGAGCAGTTCAGCGCGCTaGGCTGGCAGTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWSSSAR*AGSPAA
Trigger: TGCAGCGGGACTGCCAGCCCAGCGCGCTGAACTGCT...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTCATGGCAGTCCAGTTaGACACCCGCCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVSWQSS*TPARRT
Trigger: AGTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCAGCGCCTCCTTCATaGCAGTCCAGTTGGACACCC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDPAPPS*QSSWTP
Trigger: GGGTGTCCAACTGGACTGCCATGAAGGAGGCGCTGG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCCTCGGGGTGGCAGATaGCCAGGTATCCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAPRGGR*PGIRGT
Trigger: TGTACCGCGGATACCTGGCCATCTGCCACCCCGAGG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAGAGGCGTGTGCACGTaGGACACTACGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVARGVCT*DTTWGS
Trigger: GCTGCCCCACGTAGTGTCCCACGTGCACACGCCTCT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGGTAGTCGCCCCACATaGCCCAGGCTTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDGSRPT*PRLSPA
Trigger: TGCTGGTGAAAGCCTGGGCCATGTGGGGCGACTACC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGTGCTGTTGCTCTTATaGGCCCTGGATCGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATVLLLL*ALDRSC
Trigger: ACAAGAGCGATCCAGGGCCCATAAGAGCAACAGCAC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355540.7
ENST00000359863.8
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCTGCAGCGCCACATaGGTGCTGTTGCTCTTATGG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPGCSAT*VLLLLW
Trigger: CCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGGCTGCAGCGCCACATaGGTGCTGTTGCTCTTATGG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPGCSAT*VLLLLW
Trigger: CCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGACCTGGTGGCTGGCTTaGGTTCCCCGCGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPTWWLA*VPRACT
Trigger: GGTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGAGGACCTGGTGGCTaGCTTGGGTTCCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPGGPGG*LGFPAP
Trigger: AGGCGCGGGGAACCCAAGCCAGCCACCAGGTCCTCC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAGGGACACCAGTTGCTaGCTGTCCATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTRDTSC*LSMFSG
Trigger: GCCAGAGAACATGGACAGCCAGCAACTGGTGTCCCT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCCACTGAATCCGAAGTaGATGCGTGTGGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVPLNPK*MRVALP
Trigger: CGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTTGTACCTGCTGAGGTaGCTTCGGTGCTTCCTGACG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTLYLLR*LRCFLT
Trigger: CGTCAGGAAGCACCGAAGCCACCTCAGCAGGTACAA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCTCACGCTCCGGGTTaGCTTTCACAGCAATCGTTG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPPHAPG*LSQQSL
Trigger: CAACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTTGTGCAGGCCACTCTaGAGCATGTTCAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWLCRPL*SMFSPC
Trigger: GCAAGGGCTGAACATGCTTCAGAGTGGCCTGCACAA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACCAGGAAGCATTTaGTCACTTCCCACGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDPPGSI*SLPTPA
Trigger: GGCAGGCGTGGGAAGTGATCAAATGCTTCCTGGTGG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGTCGAGTCAGGAACTTaGTCAGGGGCTCTCGGAATG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPVESGT*SGALGM
Trigger: CATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGAC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTGGCTTCCATCATaGACAGCTCCACTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPVWLPS*TAPLSA
Trigger: CGCAGACAGTGGAGCTGTTCATGATGGAAGCCACAC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGCTGAACGAAAGCGCTaGGCAGCGCTCCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDAERKR*AALQSS
Trigger: TGAAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATATGTGGCCTTTGGACTaGCCGTACTCCGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDMWPLD*PYSVRA
Trigger: AGCCCTGACGGAGTACGGTCAGTCCAAAGGCCACAT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGCTGAAGCTGATGCATaGACCCCAAGCATAGCGTTA +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATAEADA*TPSIAL
Trigger: TAACGCTATGCTTGGGGTTCATGCATCAGCTTCAGC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCTCCACAAGGGAAAGTaGAGAGGGGTTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWLHKGK*RGVVLH
Trigger: GTGGAGGACAACCCCTCTTCACTTTCCCTTGTGGAG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGGCACCATGTTACTCTaGACCTCCTTGAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTGTMLL*TSLRMS
Trigger: CGACATCCTCAAGGAGGTTCAGAGTAACATGGTGCC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTTTTGTGCCAAGCAATaGTCTCGTCCCGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTFCAKQ*SRPGEP
Trigger: CGGTTCTCCGGGACGAGATCATTGCTTGGCACAAAA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGAGGGCAGGCCTGGCTaGAGGTACACACTGGATGAA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDEGRPG*RYTLDE
Trigger: TTCATCCAGTGTGTACCTTCAGCCAGGCCTGCCCTC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCACCCCAGGCAGAGCTaGTTCCACGGCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAHPRQS*FHGSKF
Trigger: GAACTTGGAGCCGTGGAAGCAGCTCTGCCTGGGGTG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGGTTCCTTGGCAGTCTaGGCGAGCTCCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDGSLAV*ASSIEL
Trigger: CAGCTCTATGGAGCTCGCGCAGACTGCCAAGGAACC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATACACTGCTGGGCGACTaGCACCATCGTATAGTGGCG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDTLLGD*HHRIVA
Trigger: CGCCACTATACGATGGTGGCAGTCGCCCAGCAGTGT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCACCGCATCAGAAGCTaGTCCAGCGTGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDHRIRS*SSVVFA
Trigger: GGCAAAGACCACGCTGGAGCAGCTTCTGATGCGGTG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCATCAGGCCAATCTGTaGGTTGGCAGGCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVHQANL*VGRLVS
Trigger: CGACACCAGCCTGCCAACGCACAGATTGGCCTGATG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGAGGTCCCAAGAGCTaGTCTCCTTCCCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVGGPKS*SPSPFS
Trigger: TGAGAAGGGGGAAGGAGAGCAGCTCTTGGGACCTCC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCGCTCGAGCTTCCATTaGGTGAGCCTTGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWRSSFH*VSLEET
Trigger: AGTCTCCTCAAGGCTCACGCAATGGAAGCTCGAGCG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGATGGCGCTCACCATGTaGTGCACCAAGTGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVMALTM*CTKWCR
Trigger: ACGGCACCACTTGGTGCAGCACATGGTGAGCGCCAT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGAAGCCCAGCCTCTaGATGGCGCTCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAVKPSL*MALTMC
Trigger: GCACATGGTGAGCGCCATGCAGAGGCTGGGCTTCAC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTCCCGGACCATCTTCTaGAGGGAGCGCATAAAGACG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWSRTIF*RERIKT
Trigger: CGTCTTTATGCGCTCCCTGCAGAAGATGGTCCGGGA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCTGAGGTGGCTTCGGTaGTTCCTGACGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVALRWLR*FLTLPE
Trigger: CTCAGGCAGCGTCAGGAAGCACCGAAGCCACCTCAG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTGGTGCCAATGGGGGTaGTCTTCTCACACACGGCCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVWCQWG*SSHTRP
Trigger: TGGCCGTGTGTGAGAAGAGCACCCCCATTGGCACCA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCTCCTTGGCAGCTGGTaGCAATGGGGGTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLLGSW*QWGCSS
Trigger: AGAAGAGCACCCCCATTGGCACCAGCTGCCAAGGAG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGACCCACGTCTTCTCTaGCAGCGTCGTGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPDPRLL*QRRGNV
Trigger: CACATTTCCACGACGCTGGCAGAGAAGACGTGGGTC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCAGCTCACTTCCACCTaGACCAGCGCCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDQLTST*TSASFM
Trigger: CATGAAGGAGGCGCTGGTGCAGGTGGAAGTGAGCTG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTGTAGGAGAGGCGTGTaGACGTGGGACACTACGTGG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDCRRGV*TWDTTW
Trigger: CCACGTAGTGTCCCACGTGCACACGCCTCTCCTACA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGGCAGACACGCCCAGGTaGAGCTGCCGCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWADTPR*SCRSFT
Trigger: TGTGAAGGAGCGGCAGCTGCACCTGGGCGTGTCTGC...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCCACATGGGTGCTGTTaGTCTTATGGGCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPPHGCC*SYGPWI
Trigger: GATCCAGGGCCCATAAGAGCAACAGCACCCATGTGG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAGGCCCTGTTGGAGCTaGCTGAGAACCTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPRPCWS*LRTSSC
Trigger: GCATGAAGAGGTTCTCAGGCAGCTCCAACAGGGCCT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCAGAGACTCAGAGGCTaGGCTGGAGAACATGGTCGA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPQRLRG*AGEHGR
Trigger: TCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGGTATGGGTAGATCTTaGCATTGTGTCCCCGGATGT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATGMGRS*HCVPGC
Trigger: ACATCCGGGGACACAATGGCAAGATCTACCCATACC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCATCTGTGGGGAAACTaGCACAACCCGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVHLWGN*HNPGHC
Trigger: ACAGTGCCCCGGGTTGTGGCAGTTTCCCCACAGATG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGAGATGGGGTTGTCATaGTCGATGCCCTTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPEMGLS*SMPFLA
Trigger: CGCCAAGAAGGGCATCGAGCATGACAACCCCATCTC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAACTGGGCGAGGTTGTaGAGGCGGGTCATGATGGCG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVANWARL*RRVMMA
Trigger: CGCCATCATGACCCGCCTGCACAACCTCGCCCAGTT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGCACAGGAGCCGCCTaGAGACTCTCAGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSTGAA*RLSEFC
Trigger: ACAGAACTCTGAGAGTCTGCAGGCGGCTCCTGTGCT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AGCTGCCAGTACCGCCCACTGCAAACCAGCCTGCACCCAGGCCATAACCCAGCAGTGCTCCTTGGGGACTaGCCCTCCCACACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SCQYRPLQTSLHPGHNPAVLLGD*PSHTRA
Trigger: TGCCCTCGTGTGGGAGGGGCAGTCCCCAAGGAGCAC...TGCTGGGTTATGGCCTGGGTGCAGGCTGGTTTGCAGTGGGCGGTACTGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTCTCCTGCTCGCTCTTaGAACGGATGCAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSPARS*NGCSPP
Trigger: TGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATCACAGTCTGGCAGTTaGCCACACGGATGTATGTCT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSQSGS*PHGCMS
Trigger: AGACATACATCCGTGTGGCCAACTGCCAGACTGTGA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATTCATTCTCACAGTCTaGCAGTTGGCCACACGGATG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATFILTV*QLATRM
Trigger: CATCCGTGTGGCCAACTGCCAGACTGTGAGAATGAA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTGCAGGACCTCTTTGTaGGGTTCCATGATCACCGTG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTCRTSL*GSMITV
Trigger: CACGGTGATCATGGAACCCCACAAAGAGGTCCTGCA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCCTGGGCTGCAACGTaGTACAGAACGTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVAWAAT*YRTCSP
Trigger: AGGGGAACACGTTCTGTACCACGTTGCAGCCCAGGC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCTCTGGCCCCCTTTGTaGGTGATCACCACCACTTCC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLWPPL*VITTTS
Trigger: GGAAGTGGTGGTGATCACCCACAAAGGGGGCCAGAG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCACACACGTCGCAACTaGCTCACCAGAGAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDHTRRN*LTRECW
Trigger: CCAGCACTCTCTGGTGAGCCAGTTGCGACGTGTGTG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCTCCTTCCAGTTGGTaGCTGCCATGTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWAPSSW*LPCSPC
Trigger: GCAAGGAGAACATGGCAGCCACCAACTGGAAGGAGC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTGGGCTCCTTCCAGTTaGTGGCTGCCATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPWAPSS*WLPCSP
Trigger: AGGAGAACATGGCAGCCACCAACTGGAAGGAGCCCA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCTTGTCAATGGGCTTaGCGAGGAGAGAGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPACQWA*RGESLL
Trigger: GAGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGTACTCGGCTCTGTTaGGAAAATGCTCATCAGGCG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSTRLC*ENAHQA
Trigger: CGCCTGATGAGCATTTTCCCAACAGAGCCGAGTACT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAGAGCTGGGAGGGATTaGCATTGGTGGCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWRAGRD*HWWPSR
Trigger: ACGAGAAGGCCACCAATGCCAATCCCTCCCAGCTCT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAGAGCTGGGAGGGATTaGCATTGGTGGCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPRAGRD*HWWPSR
Trigger: ACGAGAAGGCCACCAATGCCAATCCCTCCCAGCTCT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCTGTCTATGTAGCTaGGGTTGTTGCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPACLCS*GCCCRQ
Trigger: CTGCCTGCAGCAACAACCCCAGCTACATAGACAGGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTTTTGGGCGTGCTaGTCTGATCCCCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPWFWAC*SDPQEL
Trigger: TAGCTCCTGGGGATCAGACCAGCACGCCCAAAACCA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAGCAGTTCAGCGCGCTaGGCTGGCAGTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSSSAR*AGSPAA
Trigger: TGCAGCGGGACTGCCAGCCCAGCGCGCTGAACTGCT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTGGCGGCACGCACTaGGACATGGCTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWIGGTH*DMASTK
Trigger: CTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAAT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTCATGGCAGTCCAGTTaGACACCCGCCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVASWQSS*TPARRT
Trigger: AGTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAAGATGCTGCTCCAGTaGGACAAGTCGTCAGACACG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTKMLLQ*DKSSDT
Trigger: CGTGTCTGACGACTTGTCCCACTGGAGCAGCATCTT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTTCGCCAGGCCCTGTTaGAGCTGCCTGAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDFARPC*SCLRTS
Trigger: AGAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACATAGTAACGGGAGATaGGGTTGTCATGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATHSNGR*GCHARC
Trigger: GCATCGAGCATGACAACCCCATCTCCCGTTACTATG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATATGGGACAGGACGGTTaGCATCCAGGTCTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDMGQDG*HPGLQS
Trigger: CGACTGGAGACCTGGATGCCAACCGTCCTGTCCCAT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGGCCGGAGACCCCGATaGTGGTCAGAAACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPGRRPR*WSETQK
Trigger: TTTCTGAGTTTCTGACCACCATCGGGGTCTCCGGCC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AGCTGCCAGTACCGCCCACTGCAAACCAGCCTGCACCCAGGCCATAACCCAGCATCCCCGCCTTCGAACTaGGCGAGGTTGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SCQYRPLQTSLHPGHNPASPPSN*ARLCRR
Trigger: CCGCCTGCACAACCTCGCCCAGTTCGAAGGCGGGGA...TGCTGGGTTATGGCCTGGGTGCAGGCTGGTTTGCAGTGGGCGGTACTGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCATTCCGGGTGGCCGTaGCGGCCACAGTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPHSGWP*RPQSQP
Trigger: TGGCTGTGACTGTGGCCGCCACGGCCACCCGGAATG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGTGGAGCTCATGAGAGCTCCTGGATCTTCACCGGGGAGGTGCTATCTCCTGCCCGAAGTGGATGCGTGTaGCGCTCCCGCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RGAHESSWIFTGEVLSPARSGCV*RSRRVA
Trigger: GGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG...GGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGATGCAGAATGGGACTaGTTACCCACTGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATDAEWD*LPTELG
Trigger: GCCAAGTTCAGTGGGTAACCAGTCCCATTCTGCATC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTTCTCAGCTCTGTGGTaGGGATGTGTTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTFSALW*GCVWQQ
Trigger: TTGCTGCCAAACACATCCTCACCACAGAGCTGAGAA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTGTGCAGGCCACTCTaGAGCATGTTCAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLCRPL*SMFSPC
Trigger: GCAAGGGCTGAACATGCTTCAGAGTGGCCTGCACAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTGGCTGACCAATGTCTaGGACCCATTGAGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWWLTNV*DPLSAD
Trigger: GTCTGCACTCAATGGGTCTCAGACATTGGTCAGCCA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCGGAAAACTCCACAGTaGTGCTGGGGCCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVARKTPQ*CWGPEP
Trigger: AGGTTCAGGGCCCCAGCATCACTGTGGAGTTTTCCG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCCCGCTCCGTTTTCATaGCAACCTCTAGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWPAPFS*QPLAKA
Trigger: AGCCTTTGCTAGAGGTTGTCATGAAAACGGAGCGGG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTGTCATTAACCTaGCAGGCCACGCGGATAAGG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPVLSLT*QATRIR
Trigger: CCTTATCCGCGTGGCCTGTCAGGTTAATGACAACAC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCTCAATGCACTGCTTaGTCCAGAAGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWAQCTA*SRSGSP
Trigger: TGGGGAACCACTTCTGGATCAAGCAGTGCATTGAGC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCTCAATGCACTGCTTaGTCCAGAAGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPAQCTA*SRSGSP
Trigger: TGGGGAACCACTTCTGGATCAAGCAGTGCATTGAGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCTTCCTGGAGTTCGATaGTTTGCTGGGCTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWLPGVR*FAGLPV
Trigger: TACAGGCAGCCCAGCAAATCATCGAACTCCAGGAAG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCGTGCAGGTAGCAGGTaGTGGCAGACACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPRAGSR*WQTRPG
Trigger: ACCTGGGCGTGTCTGCCATCACCTGCTACCTGCACG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCTGAACCAGACCATCTaGTCGACGATGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDLNQTI*STMPSR
Trigger: CCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCAACCCGGGGCACTGTaGAAAACAAGTGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVQPGAL*KTSASW
Trigger: CCAAGAGGCACTTGTTTTTCACAGTGCCCCGGGTTG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCTCCACAAGGGAAAGTaGAGAGGGGTTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLHKGK*RGVVLH
Trigger: GTGGAGGACAACCCCTCTTCACTTTCCCTTGTGGAG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCAAGGCCCTTTCATTTaGCCCTGTGGTGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPQGPFI*PCGGIW
Trigger: CCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGGACTGCCCACACGGTaGCTCTCTTTTGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTGLPTR*LSFVLF
Trigger: AAAAAGGACAAAAGAGAGTCACCGTGTGGGCAGTCC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATACATGGTCTGGATGCTaGTGGGCAGGGACTCATCGT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDTWSGC*WAGTHR
Trigger: ACGATGAGTCCCTGCCCAGCAGCATCCAGACCATGT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCATTGCCACTCTCCTaGTCGCTCTTGGAACGGATG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDPLPLS*SLLERM
Trigger: CATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGGTTCCTTGGCAGTCTaGGCGAGCTCCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAGSLAV*ASSIEL
Trigger: CAGCTCTATGGAGCTCGCGCAGACTGCCAAGGAACC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAAGAGGTCCTTCATGTaGTGCTTGTGCAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWKRSFM*CLCRPL
Trigger: GAGTGGCCTGCACAAGCAGCACATGAAGGACCTCTT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTGTAAAGTTGGGGTGTaGCAGGAGCTGGTAGAGTGC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPCKVGV*QELVEC
Trigger: GCACTCTACCAGCTCCTGGCACACCCCAACTTTACA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAAGAAAGGGCCACACTaGTGGGCGACTGCCACCATC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAKKGPH*WATATI
Trigger: GATGGTGGCAGTCGCCCAGCAGTGTGGCCCTTTCTT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCATCAGGCCAATCTGTaGGTTGGCAGGCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAHQANL*VGRLVS
Trigger: CGACACCAGCCTGCCAACGCACAGATTGGCCTGATG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACCACTTCCATCCACTTaGGCAGATGTTGCATCATCT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATPLPST*ADVASS
Trigger: AGATGATGCAACATCTGCGCAAGTGGATGGAAGTGG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTGGTCCTTGATCCTCTaGAGCTCCCACTTGATGACG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPWSLIL*SSHLMT
Trigger: CGTCATCAAGTGGGAGCTGCAGAGGATCAAGGACCA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTCCTTGATCCTCTaGAGCTCCCACTTGATGACG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPWSLIL*SSHLMT
Trigger: CGTCATCAAGTGGGAGCTGCAGAGGATCAAGGACCA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGACAGTGTCTGTGTGCTaGTTGTCAATGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWTVSVC*LSMGLA
Trigger: CGCCAAGCCCATTGACAAGCAGCACACAGACACTGT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTCGCCGTCAGCTCGCTaGCAGAGAGGGTCTCATCCC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSPSAR*QRGSHP
Trigger: GGGATGAGACCCTCTCTGGCAGCGAGCTGACGGCGA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACTGTTGGTTAGCATGTaGAGCTGGTTTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLLVSM*SWFPMS
Trigger: GGACATTGGAAACCAGCTGCACATGCTAACCAACAG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGACCCACGTCTTCTCTaGCAGCGTCGTGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDDPRLL*QRRGNV
Trigger: CACATTTCCACGACGCTGGCAGAGAAGACGTGGGTC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCTGTCTCCGAGTACTTaGACCGCTTCTGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLSPST*TASATD
Trigger: GTCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTTCACCAGCACATCGTaGATCTGCACAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPFTSTS*ICTAAE
Trigger: CTCTGCAGCTGTGCAGATGCACGATGTGCTGGTGAA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGTATTTCCTCGATTTaGTCTCGTTCTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSISSI*SRSDAG
Trigger: GCCGGCATCAGAACGAGAGCAAATCGAGGAAATACT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTGGGTGGCACACCAATaGAGTACTTGTCGACGGCAT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPWVAHQ*STCRRH
Trigger: ATGCCGTCGACAAGTACTGCATTGGTGTGCCACCCA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCCATCTGATCGACGATaGCTTCCAGGGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTPSDRR*LPGKTE
Trigger: TTCTGTCTTCCCTGGAAGGCATCGTCGATCAGATGG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCCCACCCCAAACGTaGTCACCAACTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPGPPQT*SPTSSQ
Trigger: TTGTGAAGAAGTTGGTGAGCACGTTTGGGGTGGGCC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCGGGCTGCGGTGTTGTaGTTCTGCACAATCTCTACC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVRAAVL*FCTIST
Trigger: GGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCGGGCTGCGGTGTTGTaGTTCTGCACAATCTCTACC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDRAAVL*FCTIST
Trigger: GGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCCAGGGTGTTCACCTTaGTTTCCCCGCCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVPGCSP*FPRLRT
Trigger: AGTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGAAACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCCAGAGAGGGCTCCGTaGTGCCCCCGTCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GNMPYRPQPHLTLAEFSSPERAP*CPRPLG
Trigger: CCCCAGGGGACGGGGGCAGCACGGAGCCCTCTCTGG...AGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAGGACACCCACCAGCTaGCAGATGAGCACGCAATCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVRTPTS*QMSTQS
Trigger: TGATTGCGTGCTCATCTGGCAGCTGGTGGGTGTCCT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTCGATGATGAATGCATaGCGGACCAGGTCGGTTTAC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTSMMNA*RTRSVY
Trigger: GTAAACCGACCTGGTCCGGCATGCATTCATCATCGA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359863.8
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTCATCAAAGTGGTCTaGTCAACCACCGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVFIKVV*STTVAP
Trigger: GGGGGCCACGGTGGTTGACCAGACCACTTTGATGAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCCGCAGTTGCTGTGCTaGTTTCTCCTGAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTPQLLC*FLLKKL
Trigger: CAGTTTCTTCAGGAGAAACCAGCACAGCAACTGCGG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTGGTCTGGATGCTGCTaGGCAGGGACTCATCGTCGA +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAWSGCC*AGTHRR
Trigger: TCGACGATGAGTCCCTGCCCAGCAGCATCCAGACCA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAAAATGGCAGAGAGCTaGTACCGAGCAATTGTGTGG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATKMAES*YRAIVW
Trigger: CCACACAATTGCTCGGTACCAGCTCTCTGCCATTTT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCCAGAGCAGTTTCAATaGCCTTCTCCATGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWPEQFQ*PSPWGA
Trigger: AGCTCCCCATGGAGAAGGCCATTGAAACTGCTCTGG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGTAGGGCTCAGTGTTaGCGCTTTTCAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSRAQC*RFSGSP
Trigger: TGGACTGCCTGAAAAGCGCCAACACTGAGCCCTACT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAGTAGGGCTCAGTGTTaGCGCTTTTCAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWSRAQC*RFSGSP
Trigger: TGGACTGCCTGAAAAGCGCCAACACTGAGCCCTACT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAAAGACTTTTCCTaGGCGGCCACGATCTCTTCG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPWKDFS*AATISS
Trigger: CGAAGAGATCGTGGCCGCCCAGGAAAAGTCTTTCCA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCCTGCAGCGAATGCATaGCCTGCTTCCTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAPAANA*PASSQW
Trigger: CCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCATCAGGTGCAGAATGTaGACCAGCTGCGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAIRCRM*TSCGTV
Trigger: CACCGTCCCGCAGCTGGTCCACATTCTGCACCTGAT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTCTGAATCCGGCTGCTaGTCCTTGATCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSESGC*SLILCS
Trigger: GCTGCAGAGGATCAAGGACCAGCAGCCGGATTCAGA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAGAAGTGGTTCCCCATaGCTTCCCAGTTCTGCGAAC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWRSGSP*LPSSAN
Trigger: GTTCGCAGAACTGGGAAGCCATGGGGAACCACTTCT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCTACATCCTCCTCTTTaGACTCGCTGTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPLHPPL*TRCSPA
Trigger: AGCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAAAGTTCTTTGGTTTTaGGCGTGCTGGTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATKVLWF*ACWSDP
Trigger: GGGATCAGACCAGCACGCCCAAAACCAAAGAACTTT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGCCGCTGCACAGAAATaGACTTATCTCACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDAAAQK*TYLTRE
Trigger: CTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGATTGGCGGCACGCACTaGGACATGGCTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVIGGTH*DMASTK
Trigger: CTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAAT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATATTGGCGGCACGCACTaGGACATGGCTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDIGGTH*DMASTK
Trigger: CTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAAT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCCCTTTTCAAAAGCCTaGTGCTCCAACATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTPFSKA*CSNISV
Trigger: CACGCTGATGTTGGAGCACCAGGCTTTTGAAAAGGG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGAGCATCGAATCCAGTaGTCTTCCCAGAGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTEHRIQ*SSQSWY
Trigger: ATACCAGCTCTGGGAAGACCACTGGATTCGATGCTC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACACTCTCCAGCCGCCACTCGCGGATaGCCAGGCTGCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: VLHAEPPGMLRVHSAHSPAATRG*PGCWPS
Trigger: AGATGGCCAGCAGCCTGGCCATCCGCGAGTGGCGGC...TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAGTTCGATGATTTGCTaGGCTGCCTGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWSSMIC*AACRRG
Trigger: GCCTCTCCTACAGGCAGCCCAGCAAATCATCGAACT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCAGGGGGAAGGTGTGGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCACCAGAAGATGCTGCTCCAGTaGGACAAGTCGTCAGACACG +
Preference number: 4 (lower is better)
Translates to: PGGRCGRTWQQAGPLPHQKMLLQ*DKSSDT
Trigger: CGTGTCTGACGACTTGTCCCACTGGAGCAGCATCTT...CTGGTGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCAGCCACTGGATGGGTaGCACACCAATGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPQPLDG*HTNAVL
Trigger: AAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCTGTTGCTCTTATaGGCCCTGGATCGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPVLLLL*ALDRSC
Trigger: ACAAGAGCGATCCAGGGCCCATAAGAGCAACAGCAC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355540.7
ENST00000359863.8
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCTGCGCTGGAGAACATaGTCGAGACGTTGGACACAT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWLRWRT*SRRWTH
Trigger: ATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGACTCAGAGGCTGCGCTaGAGAACATGGTCGAGACGT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVTQRLR*RTWSRR
Trigger: ACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATACGTCCAGTAGTCCGTaGCATTGGGGAAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDTSSSP*HWGRCA
Trigger: TGCACACCTTCCCCAATGCCACGGACTACTGGACGT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGGGCGTGAGTCGAAATaGGACAGGACGGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAGRESK*DRTVGI
Trigger: GATGCCAACCGTCCTGTCCCATTTCGACTCACGCCC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCCGGAGACCCCGATaGTGGTCAGAAACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVGRRPR*WSETQK
Trigger: TTTCTGAGTTTCTGACCACCATCGGGGTCTCCGGCC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCGCTGTCCATGTTCTCTaGCTGCCCGGCGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSAVHVL*LPGGRE
Trigger: CTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGC...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GGCTATTCGATGACGCGTCTATGTGCGCTGTGGGCAGGAAGAGCTGGAAGGTGGGGTGGCCTGGCCCCGTaGATCCACGCCGAACGCTCA +
Preference number: 4 (lower is better)
Translates to: GYSMTRLCALWAGRAGRWGGLAP*IHAERS
Trigger: TGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACC...CCACCTTCCAGCTCTTCCTGCCCACAGCGCACATAGACGCGTCATCGAATAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGGGTTGGAGACCCGTTTaGAGGAGGCGGACGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWGWRPV*RRRTEA
Trigger: TGCTTCCGTCCGCCTCCTCCAAACGGGTCTCCAACC...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCTTGTGCAGACACCTaGATGGCAATGGTGTTCATG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPACADT*MAMVFM
Trigger: CATGAACACCATTGCCATTCAGGTGTCTGCACAAGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTCAGAAGCTCCTTTCTaGGGTGTGCAGTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSEAPF*GVQSLL
Trigger: CAGCAGAGACTGCACACCTCAGAAAGGAGCTTCTGA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTTCTCAGCTCTGTGGTaGGGATGTGTTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPFSALW*GCVWQQ
Trigger: TTGCTGCCAAACACATCCTCACCACAGAGCTGAGAA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGTCTGAGACCCATTaGGTGCAGACACCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWMSETH*VQTPRD
Trigger: ATCCCTTGGTGTCTGCACTCAATGGGTCTCAGACAT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTGGCTGACCAATGTCTaGGACCCATTGAGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVWLTNV*DPLSAD
Trigger: GTCTGCACTCAATGGGTCTCAGACATTGGTCAGCCA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTGGCTGACCAATGTCTaGGACCCATTGAGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDWLTNV*DPLSAD
Trigger: GTCTGCACTCAATGGGTCTCAGACATTGGTCAGCCA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGCTTCACCAGTGTCTaGGGAGCAGCCGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPGFTSV*GAAGIR
Trigger: TCTGATCCCGGCTGCTCCTCAGACACTGGTGAAGCC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGTGGCTTCCATCATaGACAGCTCCACTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAVWLPS*TAPLSA
Trigger: CGCAGACAGTGGAGCTGTTCATGATGGAAGCCACAC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCCGGGTAGTACACCTTaGAGTGTTGCACTATCAGGT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPPGSTP*SVALSG
Trigger: ACCTGATAGTGCAACACTTCAAGGTGTACTACCCGG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGATTTGGGTCCATATCTaGATCCGGCTGCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPIWVHI*IRLLVL
Trigger: AAGGACCAGCAGCCGGATTCAGATATGGACCCAAAT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGTGTTGTCATTAACCTaGCAGGCCACGCGGATAAGG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDVLSLT*QATRIR
Trigger: CCTTATCCGCGTGGCCTGTCAGGTTAATGACAACAC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTCAGGATGGCCTGGATaGAGTTCTTCCGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVSGWPG*SSSASP
Trigger: TGGAGATGCGGAAGAACTTCATCCAGGCCATCCTGA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCTGGTGATTTTTCGATaGGGGATGTCAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPLVIFR*GMSGWP
Trigger: AGGCCATCCTGACATCCCTCATCGAAAAATCACCAG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AGCTGCCAGTACCGCCCACTGCAAACCAGCCTGCACCCAGGCCATAACCCAGCATTGGGCGTGCTGGTCTaGTCCCCAGGAGCTAGTTCG +
Preference number: 4 (lower is better)
Translates to: SCQYRPLQTSLHPGHNPALGVLV*SPGASS
Trigger: CGAACTAGCTCCTGGGGATCAGACCAGCACGCCCAA...TGCTGGGTTATGGCCTGGGTGCAGGCTGGTTTGCAGTGGGCGGTACTGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCTGTAAGCCTGCGTTaGTTTGTGCAGCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVAVSLR*FVQLPG
Trigger: TCCAGGAAGCTGCACAAATCAACGCAGGCTTACAGC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGCTGTAAGCCTGCGTTaGTTTGTGCAGCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDAVSLR*FVQLPG
Trigger: TCCAGGAAGCTGCACAAATCAACGCAGGCTTACAGC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTATCCAGAGCTACATTaGCCAGTCCTTGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPYPELH*PVLVSG
Trigger: CCCGGAAACAAGGACTGGTCAATGTAGCTCTGGATA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGATTTGCTCTCGTTCTaGTGCCGGCAGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPDLLSF*CRQACR
Trigger: CCTGCACGCCTGCCGGCATCAGAACGAGAGCAAATC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCTGAACCAGACCATCTaGTCGACGATGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVALNQTI*STMPSR
Trigger: CCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTGGCCTTTCAGCTTCTaGAAGACAGGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPWPFSF*KTGSCA
Trigger: TGCACAAGACCCTGTCTTTCAGAAGCTGAAAGGCCA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTTTGTGCCAAGCAATaGTCTCGTCCCGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVFCAKQ*SRPGEP
Trigger: CGGTTCTCCGGGACGAGATCATTGCTTGGCACAAAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTTTTGTGCCAAGCAATaGTCTCGTCCCGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDFCAKQ*SRPGEP
Trigger: CGGTTCTCCGGGACGAGATCATTGCTTGGCACAAAA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTCTGTCTTCACCCACTaGATCCGAAGTGGATGCGTG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVSVFTH*IRSGCV
Trigger: CACGCATCCACTTCGGATTCAGTGGGTGAAGACAGA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCACCCCAGGCAGAGCTaGTTCCACGGCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPHPRQS*FHGSKF
Trigger: GAACTTGGAGCCGTGGAAGCAGCTCTGCCTGGGGTG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAACACACCAGCGAAATaGTCCAATACCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTNTPAK*SNTSFS
Trigger: GGAGAAGGAGGTATTGGAGCATTTCGCTGGTGTGTT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCATCTTCCTGTTACTaGCGCCAAACTTACCGAGCA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPASSCY*RQTYRA
Trigger: TGCTCGGTAAGTTTGGCGGCAGTAACAGGAAGATGC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGCGCCTGTCAGGGCCTaGTCAAAAGTCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPAPVRA*SKVFRA
Trigger: AGCCCGGAAGACTTTTGAGCAGGCCCTGACAGGCGC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGACCTGGGCCAACACCTaGAGCGAATGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPTWANT*SECMAC
Trigger: GCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAACAGCTCCACTGTCTaGGAGGGATGTCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVANSSTV*EGCRVR
Trigger: CCTGACTCGACATCCCTCGCAGACAGTGGAGCTGTT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCTTCCAGTTGGTGGCTaGCATGTTCTCCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVALPVGG*HVLLAV
Trigger: CACCGCAAGGAGAACATGGCAGCCACCAACTGGAAG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTGGTCCTTGATCCTCTaGAGCTCCCACTTGATGACG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDWSLIL*SSHLMT
Trigger: CGTCATCAAGTGGGAGCTGCAGAGGATCAAGGACCA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAGCTTGTCGAACCACTaGAGCTTGAGTTCGGACTTG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSLSNH*SLSSDL
Trigger: CAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCTCTGTTGGGAAAATaGTCATCAGGCGCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPALLGK*SSGARE
Trigger: TTCTCTCGCGCCTGATGAGCATTTTCCCAACAGAGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCTCTGTTGGGAAAATaGTCATCAGGCGCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWALLGK*SSGARE
Trigger: TTCTCTCGCGCCTGATGAGCATTTTCCCAACAGAGC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGACCTTTCCGACGGCTaGGTAGAGGCACTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPDLSDG*VEALQL
Trigger: GAGCTGGAGTGCCTCTACGCAGCCGTCGGAAAGGTC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAACCTCGAAAAACTTTaGCCTGATGAGTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWNLEKL*PDEWLG
Trigger: GCCCAGCCACTCATCAGGGCAAAGTTTTTCGAGGTT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAGCAGCTCAATGCACTaGTTGATCCAGAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTSSSMH*LIQKWF
Trigger: GAACCACTTCTGGATCAAGCAGTGCATTGAGCTGCT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTCCAGAAACTTGTCGTaGCTGTTGGTTAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTSRNLS*LLVSMC
Trigger: GCACATGCTAACCAACAGGCACGACAAGTTTCTGGA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGGAATCCAGTATCTCCTaGTGCGGCGGGGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWESSIS*CGGVML
Trigger: GAGCATCACCCCGCCGCAGCAGGAGATACTGGATTC...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTACTTGCACCGCTTCTaGCACAGACCAGCCCACATA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDYLHRF*HRPAHI
Trigger: TATGTGGGCTGGTCTGTGGCAGAAGCGGTGCAAGTA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATTCATAGGATTCTTGTaGCTGCTCAAAGAACCCGTG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATFIGFL*LLKEPV
Trigger: CACGGGTTCTTTGAGCAGGCACAAGAATCCTATGAA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTGGAGTTCGATGATTTaGTGGGCTGCCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWWSSMI*WAACRR
Trigger: TCTCCTACAGGCAGCCCAGCAAATCATCGAACTCCA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCCTGCGTTGATTTGTaGAGCTTCCTGGAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPACVDL*SFLEFD
Trigger: ATCGAACTCCAGGAAGCTGCACAAATCAACGCAGGC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTTGCCCATGACGCCTaGCAGCTGGAGGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVFAHDA*QLEVAF
Trigger: AAATGCTACCTCCAGCTGGCAGGCGTCATGGGCAAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGAGAAGGCTTTGTTTaGCTCCTCGGACTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATREGFV*LLGLVD
Trigger: ATCAACAAGTCCGAGGAGGCAAACAAAGCCTTCTCT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATAGCACATCGTGCATCTaGACAGCTGCAGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSTSCI*TAAEKA
Trigger: AGCCTTCTCTGCAGCTGTGCAGATGCACGATGTGCT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACCGGGGCATGAACCGTaGAATCTTGATGTAATAATG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATPGHEP*NLDVIM
Trigger: CATTATTACATCAAGATTGCACGGTTCATGCCCCGG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGGTATGGGTAGATCTTaGCATTGTGTCCCCGGATGT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPGMGRS*HCVPGC
Trigger: ACATCCGGGGACACAATGGCAAGATCTACCCATACC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGAGATGGGGTTGTCATaGTCGATGCCCTTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAEMGLS*SMPFLA
Trigger: CGCCAAGAAGGGCATCGAGCATGACAACCCCATCTC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATACCAGGGACACCAGTTaGTGGCTGTCCATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDTRDTS*WLSMFS
Trigger: AGAGAACATGGACAGCCAGCAACTGGTGTCCCTGGT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGAGCACCAGGTGCTTTaGATGATGTTATGCCCCACG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDEHQVL*MMLCPT
Trigger: CGTGGGGCATAACATCATGCAAAGCACCTGGTGCTC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGTTGGAGCCCATTTCTaGCAGGCGATCAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWVGAHF*QAIKEI
Trigger: TATCTCCTTGATCGCCTGCCAGAAATGGGCTCCAAC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCCTTGCAGGAGGTTTaGAAGGAGAGGCAAGAACTC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDPLQEV*KERQEL
Trigger: GAGTTCTTGCCTCTCCTTCCAAACCTCCTGCAAGGG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAAAAGTCTTCCGGGCTaGAGTGTCCTGGGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPKSLPG*SVLGFV
Trigger: TACAAAGCCCAGGACACTCCAGCCCGGAAGACTTTT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTCGTGTGTCACATGGTaGAAAGACTTTTCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSCVTW*KDFSWA
Trigger: CGCCCAGGAAAAGTCTTTCCACCATGTGACACACGA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAATCATTGAAGGAATTTaGGAAGAGCCTCGTGACCGA +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATIIEGI*EEPRDR
Trigger: TCGGTCACGAGGCTCTTCCCAAATTCCTTCAATGAT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAACATTCTGCTCCACTaGGGATCGTTCAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPNILLH*GSFSVA
Trigger: AGCCACACTGAACGATCCCCAGTGGAGCAGAATGTT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTTGTCATGGATGTGGTaGGGGGCGTGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPLSWMW*GACSTS
Trigger: GCTGGTGGAGCACGCCCCCCACCACATCCATGACAA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCCCGTCCTCCATCCTaGCCGGCACCGCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRARPPS*PAPPGS
Trigger: TGACCCCGGCGGTGCCGGCCAGGATGGAGGACGGGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTGTGCTGCTTGTCAATaGGCTTGGCGAGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVCAACQ*AWRGES
Trigger: ACTCTCTCCTCGCCAAGCCCATTGACAAGCAGCACA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGTACTCGGCTCTGTTaGGAAAATGCTCATCAGGCG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSTRLC*ENAHQA
Trigger: CGCCTGATGAGCATTTTCCCAACAGAGCCGAGTACT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCTACATCCTCCTCTTTaGACTCGCTGTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDLHPPL*TRCSPA
Trigger: AGCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGACTTGTCGTGCCTGTTaGTTAGCATGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPTCRAC*LACAAG
Trigger: ACCAGCTGCACATGCTAACCAACAGGCACGACAAGT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAATCTGGGGAAAAGCTaGACCCACGTCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVNLGKS*THVFSA
Trigger: GGCAGAGAAGACGTGGGTCCAGCTTTTCCCCAGATT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAGCATCGAATCCAGTaGTCTTCCCAGAGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPEHRIQ*SSQSWY
Trigger: ATACCAGCTCTGGGAAGACCACTGGATTCGATGCTC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAACTGGTTCAATTCCTTaGAGCATCGAATCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATTGSIP*SIESSG
Trigger: ACCACTGGATTCGATGCTCCAAGGAATTGAACCAGT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTCAGGGCTTCCCACTaGTTCAATTCCTTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPVRASH*FNSLEH
Trigger: ATGCTCCAAGGAATTGAACCAGTGGGAAGCCCTGAC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGTCAGGGCTTCCCACTaGTTCAATTCCTTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWVRASH*FNSLEH
Trigger: ATGCTCCAAGGAATTGAACCAGTGGGAAGCCCTGAC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCGGAGACCCCGATGGTaGTCAGAAACTCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWRRPRW*SETQKC
Trigger: ACATTTCTGAGTTTCTGACCACCATCGGGGTCTCCG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGACCTTAAAGTTTGGCTaGGCGAAGCACCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWTLKFG*AKHRAT
Trigger: GGTCGCCCGGTGCTTCGCCCAGCCAAACTTTAAGGT...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAGGGACACCAGTTGCTaGCTGTCCATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVARDTSC*LSMFSG
Trigger: GCCAGAGAACATGGACAGCCAGCAACTGGTGTCCCT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGCTATTCGATGACGCGTCTATGTGCGCTGTGGGCAGGAAGAGCTGGAAGGTGGAGGGCTCCGAGAGTCTaGCATGCCGACCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GYSMTRLCALWAGRAGRWRAPRV*HADPLL
Trigger: CAGCAGCGGGTCGGCATGCCAGACTCTCGGAGCCCT...CCACCTTCCAGCTCTTCCTGCCCACAGCGCACATAGACGCGTCATCGAATAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCCTCTACCCCTTCCATaGCAGGCTCAAACTGACAGA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVPLPLP*QAQTDR
Trigger: TCTGTCAGTTTGAGCCTGCCATGGAAGGGGTAGAGG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456197.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCACTTTCAGAGAAAGTaGTCCCCTCGGAATGATGGA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPHFQRK*SPRNDG
Trigger: TCCATCATTCCGAGGGGATCACTTTCTCTGAAAGTG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGCTTGTGCAGACACCTaGATGGCAATGGTGTTCATG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDACADT*MAMVFM
Trigger: CATGAACACCATTGCCATTCAGGTGTCTGCACAAGC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCCTTGGAGCCCAGGATaGTACTTGCAACATCAAATA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTPWSPG*YLQHQI
Trigger: TATTTGATGTTGCAAGTATCATCCTGGGCTCCAAGG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTGGAGTTTGGAGAGGTaGCTTCTCGAACCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVWSLER*LLEPSR
Trigger: ACGACTTGGTTCGAGAAGTCACCTCTCCAAACTCCA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGATGTGGCCTTTGGACTaGCCGTACTCCGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPMWPLD*PYSVRA
Trigger: AGCCCTGACGGAGTACGGTCAGTCCAAAGGCCACAT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCTTCCTGGAGTTCGATaGTTTGCTGGGCTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVALPGVR*FAGLPV
Trigger: TACAGGCAGCCCAGCAAATCATCGAACTCCAGGAAG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATTTTTCCATACTGGATaGTCGCTGAAGCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATFFHTG*SLKLMH
Trigger: ATGCATCAGCTTCAGCGATCATCCAGTATGGAAAAA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTATCCAGAGCTACATTaGCCAGTCCTTGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDYPELH*PVLVSG
Trigger: CCCGGAAACAAGGACTGGTCAATGTAGCTCTGGATA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTCGGACTTGTTGATCTaGGCCAAGAACATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSDLLI*AKNIPF
Trigger: GAAGGGAATGTTCTTGGCTCAGATCAACAAGTCCGA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTGGCCTTTCAGCTTCTaGAAGACAGGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDWPFSF*KTGSCA
Trigger: TGCACAAGACCCTGTCTTTCAGAAGCTGAAAGGCCA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGTCAAAATCCGTCGTaGACTGGCCTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSQNPS*TGLSAS
Trigger: AGAAGCTGAAAGGCCAGTTCACGACGGATTTTGACT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGGGCAGGCGTCGTTCATaGCGAGGTATGGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWGRRRS*RGMGRS
Trigger: AGATCTACCCATACCTCGTCATGAACGACGCCTGCC...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CGTGGAGCTCATGAGAGCTCCTGGATCTTCACCGGGGAGGTGCTATCTCCTGCCGCGGTGACGGCTTTCTaGACCAGGGACACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: RGAHESSWIFTGEVLSPAAVTAF*TRDTSC
Trigger: GCAACTGGTGTCCCTGGTTCAGAAAGCCGTCACCGC...GGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVITATQ*NYGASV
Trigger: CACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTAT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCTCATCAACTTGACTaGATATGCTCTGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPPHQLD*ICSELA
Trigger: AGCCAGCTCAGAGCATATTCAGTCAAGTTGATGAGG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCCTCGGCCTTGACCTGTaGGCAGCATGTGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSLGLDL*AACGLG
Trigger: TCCAAGCCCACATGCTGCTCACAGGTCAAGGCCGAG...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGAGGTAGTAGGATTTaGCAAGAAGGAATTGGCAAC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRGSRI*QEGIGN
Trigger: GTTGCCAATTCCTTCTTGGCAAATCCTACTACCTCT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTTGTTCATTTTCAGCTaGAAAGAGGGAGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTLFIFS*KEGDRA
Trigger: GGCTCTGTCTCCCTCTTTGCAGCTGAAAATGAACAA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCACCGCATCAGAAGCTaGTCCAGCGTGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPHRIRS*SSVVFA
Trigger: GGCAAAGACCACGCTGGAGCAGCTTCTGATGCGGTG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATACCACAGTGTCTGTGTaGTGCTTGTCAATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDTTVSV*CLSMGL
Trigger: CAAGCCCATTGACAAGCAGCACACAGACACTGTGGT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTCTTCCGCATCTCCATaGTCATCACTGCCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSSASP*SSLPGA
Trigger: CGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAGGTGTCTGATTGGCTaGCATTGGGGAGTTATTCTT +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTRCLIG*HWGVIL
Trigger: AAGAATAACTCCCCAATGGCAGCCAATCAGACACCT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAGCAGCTCAATGCACTaGTTGATCCAGAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSSSMH*LIQKWF
Trigger: GAACCACTTCTGGATCAAGCAGTGCATTGAGCTGCT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCTGTTGGTTAGCATGTaGAGCTGGTTTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPLLVSM*SWFPMS
Trigger: GGACATTGGAAACCAGCTGCACATGCTAACCAACAG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGAATCCAGTATCTCCTaGTGCGGCGGGGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPESSIS*CGGVML
Trigger: GAGCATCACCCCGCCGCAGCAGGAGATACTGGATTC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTGGAGTTCGATGATTTaGTGGGCTGCCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDWSSMI*WAACRR
Trigger: TCTCCTACAGGCAGCCCAGCAAATCATCGAACTCCA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGGTGGAGCTCTCGCTaGATGTGCATGATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPGWSSR*MCMIRL
Trigger: CAGCCGAATCATGCACATGCAGCGAGAGCTCCACCC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTGGGTTCCCCGCGCCTaGACCGTAGCCAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTWVPRA*TVASRS
Trigger: TGACCGGCTGGCTACGGTGCAGGCGCGGGGAACCCA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCGCATTGGGGAAGGTGTaGAGCGCCCACTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSALGKV*SAHSLS
Trigger: GCTCAAGGAGTGGGCGCTGCACACCTTCCCCAATGC...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCACCAGGGACACCAGTTaGTGGCTGTCCATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVATRDTS*WLSMFS
Trigger: AGAGAACATGGACAGCCAGCAACTGGTGTCCCTGGT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPRSRKS*GLRARS
Trigger: GCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATACTGAACTTGGCTGCTaGTGTCCAGAATCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDTELGC*CPESLL
Trigger: CAAGAGCGATTCTGGACAGCAGCAGCCAAGTTCAGT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACGCCAGTACCGCCCACTaGAAACCAGCCTGCACCCAG +
Preference number: 4 (lower is better)
Translates to: GTECFMLSLRACFVYTPHASTAH*KPACTQ
Trigger: CTGGGTGCAGGCTGGTTTGCAGTGGGCGGTACTGGC...GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGGAGGTGCTATCTCCTaGCTTGGCCATTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAGGAIS*LGHSKV
Trigger: AACCTTGGAATGGCCAAGGCAGGAGATAGCACCTCC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAAGCGAGACCCTGTCTTaGCTGTCCTTGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HAAEALCGRQQHRAVVLASETLS*LSLALR
Trigger: CCTCAAGGCCAAGGACAGGCAAGACAGGGTCTCGCT...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCATACCAACCATTTCTaGGGGAGGCACTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDHTNHF*GRHCVL
Trigger: GAGAACACAGTGCCTCCCCCAGAAATGGTTGGTATG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCCTTAGAGTCTCTCTaGCAGTATATCCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWALESL*QYILSQ
Trigger: TTGGCTCAGGATATACTGCCAGAGAGACTCTAAGGC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTGGTCTGGATGCTGCTaGGCAGGGACTCATCGTCGA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPWSGCC*AGTHRR
Trigger: TCGACGATGAGTCCCTGCCCAGCAGCATCCAGACCA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTCACAGTCTGGCAGTTaGCCACACGGATGTATGTCT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVSQSGS*PHGCMS
Trigger: AGACATACATCCGTGTGGCCAACTGCCAGACTGTGA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGTTGGAGCCCATTTCTaGCAGGCGATCAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDVGAHF*QAIKEI
Trigger: TATCTCCTTGATCGCCTGCCAGAAATGGGCTCCAAC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAGTAGGGCTCAGTGTTaGCGCTTTTCAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVASRAQC*RFSGSP
Trigger: TGGACTGCCTGAAAAGCGCCAACACTGAGCCCTACT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGATCATTGAAGGAATTTaGGAAGAGCCTCGTGACCGA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTIIEGI*EEPRDR
Trigger: TCGGTCACGAGGCTCTTCCCAAATTCCTTCAATGAT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCCAGGCGCATGGTGCTaGTGCTGGGCGAACCGGGGC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRPGAWC*CWANRG
Trigger: GCCCCGGTTCGCCCAGCACCAGCACCATGCGCCTGG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGGTCCACGCAGGCCTTaGAGAGCAGGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTGPRRP*RAGRAR
Trigger: CCTGGCCCTGCCTGCTCTCCAAGGCCTGCGTGGACC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGCTCCAGGTAGCGACTaGCTCCTCCCAAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPAPGSD*LLPKTA
Trigger: TGCAGTCTTTGGGAGGAGCCAGTCGCTACCTGGAGC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGATGTCAGGATGGCCTaGATGAAGTTCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDDVRMA*MKFFRI
Trigger: GATGCGGAAGAACTTCATCCAGGCCATCCTGACATC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGACACGACGTTTCATaGAGTTGTCAAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRHDVS*SCQKPR
Trigger: TCGAGGTTTTTGACAACTCCATGAAACGTCGTGTCT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGCAGCTGGTGCCAATaGGGGTGCTCTTCTCACACA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPGSWCQ*GCSSHT
Trigger: TGTGTGAGAAGAGCACCCCCATTGGCACCAGCTGCC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCCTTTTCAAAAGCCTaGTGCTCCAACATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDPFSKA*CSNISV
Trigger: CACGCTGATGTTGGAGCACCAGGCTTTTGAAAAGGG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCCCTTTTCAAAAGCCTaGTGCTCCAACATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVPFSKA*CSNISV
Trigger: CACGCTGATGTTGGAGCACCAGGCTTTTGAAAAGGG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGAGCATCGAATCCAGTaGTCTTCCCAGAGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDEHRIQ*SSQSWY
Trigger: ATACCAGCTCTGGGAAGACCACTGGATTCGATGCTC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCACGTGGGACACTACGTaGGGCAGCCGCCGCCACTCG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTTWDTT*GSRRHS
Trigger: CGAGTGGCGGCGGCTGCCCCACGTAGTGTCCCACGT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTGTTCCTTCCCAGGTTaGTTGGCTGTAAGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVACSFPG*LAVSLR
Trigger: ACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCAGCCACTGGATGGGTaGCACACCAATGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAQPLDG*HTNAVL
Trigger: AAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTTCGCCAGGCCCTGTTaGAGCTGCCTGAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPFARPC*SCLRTS
Trigger: AGAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATAATGCGTTGGCTTTaGCATCAGAAACTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWIMRWL*HQKLPR
Trigger: CCTGGGGAGTTTCTGATGCCAAAGCCAACGCATTAT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCATAGTAACGGGAGATaGGGTTGTCATGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDHSNGR*GCHARC
Trigger: GCATCGAGCATGACAACCCCATCTCCCGTTACTATG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGGAGGACCTGGTGGCTaGCTTGGGTTCCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTGGPGG*LGFPAP
Trigger: AGGCGCGGGGAACCCAAGCCAGCCACCAGGTCCTCC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTCGCGGAGGACCTGGTaGCTGGCTTGGGTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSRRTW*LAWVPR
Trigger: GCGGGGAACCCAAGCCAGCCACCAGGTCCTCCGCGA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAGGGCGTGAGTCGAAATaGGACAGGACGGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: HAAEALCGRQQHRAVVLAGRESK*DRTVGI
Trigger: GATGCCAACCGTCCTGTCCCATTTCGACTCACGCCC...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGATCTGATGCAGAATaGGACTGGTTACCCACTGAA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPGSDAE*DWLPTE
Trigger: TTCAGTGGGTAACCAGTCCCATTCTGCATCAGATCC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGCCTGTGAGCAGCATGTaGGCTTGGAATCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWPVSSM*AWNQAG
Trigger: TCCAGCCTGATTCCAAGCCCACATGCTGCTCACAGG...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 72 bp AGTCCCTCGGCCTTGACCTGTGAGCAGCATGTGGGCTaGGAATCAGGCTGGACGGGCTTCCCTCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SPSALTCEQHVG*ESGWTGFPPSF
Trigger: GAAACTGGGAGGGAAGCCCGTCCAGCCTGATTCCAAGCCCACATGCTGCTCACAGGTCAAGGCCGAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 72 bp CAACCTAGCGAGACCCTGTCTTGCCTGTCCTTGGCCTaGAGGTTGGTCCTAGGGCTGGACTGCCCACACGGT +
Preference number: 4 (lower is better)
Translates to: QPSETLSCLSLA*RLVLGLDCPHG
Trigger: ACCGTGTGGGCAGTCCAGCCCTAGGACCAACCTCAAGGCCAAGGACAGGCAAGACAGGGTCTCGCTAGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCAATTGTGTGGAATTTaGGAACGAAAACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTQLCGI*ERKPPA
Trigger: TGCTGGAGGTTTTCGTTCTCAAATTCCACACAATTG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGCTCCAAGTTCTGACTaGGGCTTACACTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTAPSSD*GLHFLK
Trigger: TTTTAAGAAGTGTAAGCCTCAGTCAGAACTTGGAGC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAACTTCGACAGTCTGTaGCTTGGAATGTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWNFDSL*LGMSAC
Trigger: ACAAGCAGACATTCCAAGTCACAGACTGTCGAAGTT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGCCACAGAGCCTGCATaGGCTCTGCGCGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKATEPA*ALRAPA
Trigger: AGCCGGTGCGCGCAGAGCTCATGCAGGCTCTGTGGC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCTTGGAGCCCAGGATaGTACTTGCAACATCAAATA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPPWSPG*YLQHQI
Trigger: TATTTGATGTTGCAAGTATCATCCTGGGCTCCAAGG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACAGTTAAGTCCATCATaGCAAAGAGAAGTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATQLSPS*QREVLS
Trigger: TGAAAGCACTTCTCTTTGTCATGATGGACTTAACTG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGTCGAGTCAGGAACTTaGTCAGGGGCTCTCGGAATG +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPVESGT*SGALGM
Trigger: CATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGAC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTGGCCTTTCAGCTTCTaGAAGACAGGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAWPFSF*KTGSCA
Trigger: TGCACAAGACCCTGTCTTTCAGAAGCTGAAAGGCCA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTACTCTGAACCTCCTTaGGGATGTCGCGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPYSEPP*GCRGGP
Trigger: AGGTCCTCCGCGACATCCTCAAGGAGGTTCAGAGTA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGCAGCGCCCACTCCTTaGGCATGCTGCGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKAAPTP*ACCAAP
Trigger: TGGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCGGACTGGTTACCCACTaGACTTGGCTGCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSGLVTH*TWLLLS
Trigger: GGACAGCAGCAGCCAAGTTCAGTGGGTAACCAGTCC...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTGTTGGGAATGAACTaGGCACCAGGTGCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLLGMN*APGALH
Trigger: ATGCAAAGCACCTGGTGCTCAGTTCATTCCCAACAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGCCCAGGATGATACTTaGAACATCAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTAQDDT*NIKYHS
Trigger: GCTGTGATATTTGATGTTGCAAGTATCATCCTGGGC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAACAGCTCCACTGTCTaGGAGGGATGTCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPNSSTV*EGCRVR
Trigger: CCTGACTCGACATCCCTCGCAGACAGTGGAGCTGTT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTTTCAAAAGCCTGGTaGTCCAACATCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVFSKAW*SNISVD
Trigger: GTCCACGCTGATGTTGGAGCACCAGGCTTTTGAAAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGAACATTCCCTTCAGTaGATAAAATTCGGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATEHSLQ*IKFGCH
Trigger: ATGACAGCCGAATTTTATGCACTGAAGGGAATGTTC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCACTTCAGCTGTCTGTaGCGAGAAATTGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPHFSCL*REIAQE
Trigger: TTCTTGAGCAATTTCTCGGCACAGACAGCTGAAGTG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCCGGGGCATGAACCGTaGAATCTTGATGTAATAATG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWPGHEP*NLDVIM
Trigger: CATTATTACATCAAGATTGCACGGTTCATGCCCCGG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATTGAGTCTATTTAAATaGAGGACGAATTCCGCGAAG +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLSLFK*RTNSAK
Trigger: CTTCGCGGAATTCGTCCTGCATTTAAATAGACTCAA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCTCCATGTTCTCTGGCTaGCCGGCGGCCGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPSMFSG*PAAERG
Trigger: TCCTCTCTCGGCCGCCGGGCAGCCAGAGAACATGGA...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPNKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCAGGGGGAAGGTGTGGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCACCAGACACAGCTGCTGCTTTaGTTGGGAATCGACTTTTCA +
Preference number: 4 (lower is better)
Translates to: PGGRCGRTWQQAGPLPHQTQLLL*LGIDFS
Trigger: TGAAAAGTCGATTCCCAAGCAAAGCAGCAGCTGTGT...CTGGTGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGATGCAAGGAATGAACTaGTTTCTCAGCTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPMQGMN*FLSSVV
Trigger: CACCACAGAGCTGAGAAACCAGTTCATTCCTTGCAT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGAGCTGCAGGGGCAGTaGGCACCCCAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKELQGQ*APQAEL
Trigger: CAGCTCTGCCTGGGGTGCCCACTGCCCCTGCAGCTC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATTGCCAAGAAGGAATTaGCAACAATCTGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLPRRN*QQSEEH
Trigger: ATGCTCTTCAGATTGTTGCCAATTCCTTCTTGGCAA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTTCAGGAATGTCTGCTaGTTCTGGAGAACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDFRNVC*FWRTQV
Trigger: CACTTGGGTTCTCCAGAACCAGCAGACATTCCTGAA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCCTCACAGTGGAGTTTaGAGAGGTGACTTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAPHSGV*RGDFSN
Trigger: GTTCGAGAAGTCACCTCTCCAAACTCCACTGTGAGG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCATCCCGCAGAGGTCTaGCGTCTTTGTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWHPAEV*RLCVLK
Trigger: TTTTAAAACACAAAGACGCCAGACCTCTGCGGGATG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCCAGGCGCATGGTGCTaGTGCTGGGCGAACCGGGGC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCPGAWC*CWANRG
Trigger: GCCCCGGTTCGCCCAGCACCAGCACCATGCGCCTGG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAAGGCTCGGAGCAGCTaGAACAGCAATTCTATATCT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPKARSS*NSNSIS
Trigger: AGATATAGAATTGCTGTTCCAGCTGCTCCGAGCCTT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCATAGTTCACTTGGTTTaGCTGCTCCACAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPIVHLV*LLHSHQ
Trigger: CTGATGACTGTGGAGCAGCCAAACCAAGTGAACTAT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGGCACGCACTGGGACATaGCTTCCACAAAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWARTGT*LPQSSS
Trigger: TGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGC...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCACTGGTTCAATTCCTTaGAGCATCGAATCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPTGSIP*SIESSG
Trigger: ACCACTGGATTCGATGCTCCAAGGAATTGAACCAGT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCCGCCACTCGCGGATaGCCAGGCTGCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRAATRG*PGCWPS
Trigger: AGATGGCCAGCAGCCTGGCCATCCGCGAGTGGCGGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTGCTGTCGAATCTTCTaGAAGCAATCCACGATAGGA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWCCRIF*KQSTIG
Trigger: TCCTATCGTGGATTGCTTCCAGAAGATTCGACAGCA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCTTCGCCAGGCCCTGTTaGAGCTGCCTGAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSFARPC*SCLRTS
Trigger: AGAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAA...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCATTTGGGGAGTTGCTTaGTCTTGGCCTCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPIWGVA*SWPPRF
Trigger: AAATCTTGGAGGCCAAGACCAAGCAACTCCCCAAAT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATATAATGCGTTGGCTTTaGCATCAGAAACTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDIMRWL*HQKLPR
Trigger: CCTGGGGAGTTTCTGATGCCAAAGCCAACGCATTAT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACCACGAGGCGCATCTGTaGGGAAACTGCCACAACCCG +
Preference number: 4 (lower is better)
Translates to: GTECFMLSLRACFVYTPHHEAHL*GNCHNP
Trigger: CGGGTTGTGGCAGTTTCCCCACAGATGCGCCTCGTG...GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCATAGTAACGGGAGATaGGGTTGTCATGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAHSNGR*GCHARC
Trigger: GCATCGAGCATGACAACCCCATCTCCCGTTACTATG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGACGTCCAGTAGTCCGTaGCATTGGGGAAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPTSSSP*HWGRCA
Trigger: TGCACACCTTCCCCAATGCCACGGACTACTGGACGT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGATCCACCTTAAAGTTTaGCTGGGCGAAGCACCGGGC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPIHLKV*LGEAPG
Trigger: GCCCGGTGCTTCGCCCAGCCAAACTTTAAGGTGGAT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGAGTTAAAAATGGATaGAAGGGAGCTGTTCGTACA +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRVKNG*KGAVRT
Trigger: TGTACGAACAGCTCCCTTCCATCCATTTTTAACTCT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATCCCGCAGGGTGGCCTaGCCCCGTGGATCCACGCCG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSRRVA*PRGSTP
Trigger: CGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACGAAGTGGATGCGTGTaGCGCTCCCGCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKRSGCV*RSRRVA
Trigger: GGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CAA 72 bp ATGGAGCGCAAGACGACTCACACAGTGGCCCAGGCCTaGTCACACGCAGTGAGGACAATCAGAGGAGCACGG +
Preference number: 4 (lower is better)
Translates to: MERKTTHTVAQA*SHAVRTIRGAR
Trigger: CCGTGCTCCTCTGATTGTCCTCACTGCGTGTGACAAGGCCTGGGCCACTGTGTGAGTCGTCTTGCGCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCAATTGTGTGGAATTTaGGAACGAAAACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWQLCGI*ERKPPA
Trigger: TGCTGGAGGTTTTCGTTCTCAAATTCCACACAATTG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCACACACCAAGGTTTTaGCCAAACTTCGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAHTPRF*PNFDSL
Trigger: CAGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACACAAAATTTATCATTaGAGGAATTTGGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATHKIYH*RNLGRA
Trigger: GGCTCTTCCCAAATTCCTTCAATGATAAATTTTGTG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCAGCCGGGATCAGATaGAAAAGGTTTATAATTGCT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPAAGIR*KRFIIA
Trigger: AGCAATTATAAACCTTTTTCATCTGATCCCGGCTGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCCCGCTCCGTTTTCATaGCAACCTCTAGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPPAPFS*QPLAKA
Trigger: AGCCTTTGCTAGAGGTTGTCATGAAAACGGAGCGGG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTCAGGATGGCCTGGATaGAGTTCTTCCGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSGWPG*SSSASP
Trigger: TGGAGATGCGGAAGAACTTCATCCAGGCCATCCTGA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACACTCTCCAATGTGGCCTTTGGACTaGCCGTACTCCGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VLHAEPPGMLRVHSAHSPMWPLD*PYSVRA
Trigger: AGCCCTGACGGAGTACGGTCAGTCCAAAGGCCACAT...TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAAGCATAGCGTTATTTaGACTGGGATCATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPKHSVI*TGIMLR
Trigger: TCTCAGCATGATCCCAGTTCAAATAACGCTATGCTT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTTTTTCCATACTGGATaGTCGCTGAAGCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPFFHTG*SLKLMH
Trigger: ATGCATCAGCTTCAGCGATCATCCAGTATGGAAAAA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACGCTCCTCTCGCCGTaGCTCTGTGAGGCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRTLLSP*LCEAGV
Trigger: GACGCCTGCCTCACAGAGTCACGGCGAGAGGAGCGT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAACGCTCCTCTCGCCGTaGCTCTGTGAGGCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKTLLSP*LCEAGV
Trigger: GACGCCTGCCTCACAGAGTCACGGCGAGAGGAGCGT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTTTTGTGCCAAGCAATaGTCTCGTCCCGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPFCAKQ*SRPGEP
Trigger: CGGTTCTCCGGGACGAGATCATTGCTTGGCACAAAA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAGAGAAAAACCAGCATaGTGGGTTCATCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVREKPA*WVHQLL
Trigger: CAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AGCTGCCAGTACCGCCCACTGCAAACCAGCCTGCACCCAGGCCATAACCCAGCATCTGTCTTCACCCACTaGATCCGAAGTGGATGCGTG +
Preference number: 4 (lower is better)
Translates to: SCQYRPLQTSLHPGHNPASVFTH*IRSGCV
Trigger: CACGCATCCACTTCGGATTCAGTGGGTGAAGACAGA...TGCTGGGTTATGGCCTGGGTGCAGGCTGGTTTGCAGTGGGCGGTACTGGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp AAACACATGAAGATAGCTGAGGGCTCCGAGAGTCTGGCATGCCGACCCGCTGCTAGTCGAACACGCGGCTaGAGCACTGTGTGGCCGACA +
Preference number: 4 (lower is better)
Translates to: KHMKIAEGSESLACRPAASRTRG*STVWPT
Trigger: TGTCGGCCACACAGTGCTTCAGCCGCGTGTTCGACT...AGCAGCGGGTCGGCATGCCAGACTCTCGGAGCCCTCAGCTATCTTCATGTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCATGTTGCCTCGCTTGTaGAGACACCTGAATGGCAAT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAMLPRL*RHLNGN
Trigger: ATTGCCATTCAGGTGTCTGCACAAGCGAGGCAACAT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACGAGGTCGGCCAGCGTaGTGTAGGCGAGGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKRGRPA*CRRGAL
Trigger: TAAGGCCCCTCGCCTACAGCACGCTGGCCGACCTCG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTCGCTGAGGGGCAGGTaGTGGCGGACATGGTGCACG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSLRGR*WRTWCT
Trigger: CGTGCACCATGTCCGCCAGCACCTGCCCCTCAGCGA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAGCAGGGCCAGGAGCTaGAGGGGCAGTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSRARS*RGSGHP
Trigger: GGGGTGCCCACTGCCCCTGCAGCTCCTGGCCCTGCT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTGTTCATTTTCAGCTaGAAAGAGGGAGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLFIFS*KEGDRA
Trigger: GGCTCTGTCTCCCTCTTTGCAGCTGAAAATGAACAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAAGAGGTCCTTCATGTaGTGCTTGTGCAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPKRSFM*CLCRPL
Trigger: GAGTGGCCTGCACAAGCAGCACATGAAGGACCTCTT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCCAGGATGATACTTaGAACATCAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPAQDDT*NIKYHS
Trigger: GCTGTGATATTTGATGTTGCAAGTATCATCCTGGGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAACACCTGCAGCGAATaGATGGCCTGCTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPNTCSE*MACFLT
Trigger: TGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGGCGCATGGTGCTGGTaGTGGGCGAACCGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASGAWCW*WANRGA
Trigger: TGCGCCCCGGTTCGCCCAGCACCAGCACCATGCGCC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAACGGCCAGCCGCCTCTaGTCGATGGTGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKTASRL*SMVTLG
Trigger: GCCCAGTGTCACCATCGAGCAGAGGCGGCTGGCCGT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTGGTCCTTGATCCTCTaGAGCTCCCACTTGATGACG +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPWSLIL*SSHLMT
Trigger: CGTCATCAAGTGGGAGCTGCAGAGGATCAAGGACCA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGCGGCAATTCCACGCTaGAGAGGTTTGAAGCTACTG +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPAAIPR*RGLKLL
Trigger: CAGTAGCTTCAAACCTCTGCAGCGTGGAATTGCCGC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTCATAGGATTCTTGTaGCTGCTCAAAGAACCCGTG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVFIGFL*LLKEPV
Trigger: CACGGGTTCTTTGAGCAGGCACAAGAATCCTATGAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGAACATTCCCTTCAGTaGATAAAATTCGGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTEHSLQ*IKFGCH
Trigger: ATGACAGCCGAATTTTATGCACTGAAGGGAATGTTC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAGCACATCGTGCATCTaGACAGCTGCAGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSTSCI*TAAEKA
Trigger: AGCCTTCTCTGCAGCTGTGCAGATGCACGATGTGCT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACGGGTGGAGCTCTCGCTaGATGTGCATGATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: GTECFMLSLRACFVYTPHGWSSR*MCMIRL
Trigger: CAGCCGAATCATGCACATGCAGCGAGAGCTCCACCC...GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCGGGGCATGAACCGTaGAATCTTGATGTAATAATG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDPGHEP*NLDVIM
Trigger: CATTATTACATCAAGATTGCACGGTTCATGCCCCGG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGACTGTGAAAAACAAGTaGCTCTTGGTGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPTVKNK*LLVVSF
Trigger: AAAGGAGACCACCAAGAGGCACTTGTTTTTCACAGT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACACTCTCCACATCTGTGGGGAAACTaGCACAACCCGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: VLHAEPPGMLRVHSAHSPHLWGN*HNPGHC
Trigger: ACAGTGCCCCGGGTTGTGGCAGTTTCCCCACAGATG...TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTCCATGTTCTCTGGCTaGCCGGCGGCCGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSMFSG*PAAERG
Trigger: TCCTCTCTCGGCCGCCGGGCAGCCAGAGAACATGGA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVNKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDNKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTCAGCAGCACTGTGCCTaGCCAGGCAGCGCACGCTGT +
Preference number: 4 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLQQHCA*PGSARC
Trigger: ACAGCGTGCGCTGCCTGGGCAGGCACAGTGCTGCTG...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACTGAGCCAATTAGTATaGATTCATCAAACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLSQLV*IHQTAC
Trigger: ACAAGCTGTTTGATGAATCCATACTAATTGGCTCAG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGCCTTAGAGTCTCTCTaGCAGTATATCCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAALESL*QYILSQ
Trigger: TTGGCTCAGGATATACTGCCAGAGAGACTCTAAGGC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTACCGAGCAATTGTGTaGAATTTGAGAACGAAAACC +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTYRAIV*NLRTKT
Trigger: GGTTTTCGTTCTCAAATTCCACACAATTGCTCGGTA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAAAATGGCAGAGAGCTaGTACCGAGCAATTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAKMAES*YRAIVW
Trigger: CCACACAATTGCTCGGTACCAGCTCTCTGCCATTTT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAGTGGCGGATCAAGCTaGCGACAAAGGGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSGGSS*RQRAGR
Trigger: GCGCCCTGCCCTTTGTCGCCAGCTTGATCCGCCACT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAAGTCGTGTGTCACATaGTGGAAAGACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVKSCVT*WKDFSW
Trigger: CCAGGAAAAGTCTTTCCACCATGTGACACACGACTT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCAGGGGCTCTCGGAATaGACTCCCCGCCTCGATCAG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTQGLSE*TPRLDQ
Trigger: CTGATCGAGGCGGGGAGTCCATTCCGAGAGCCCCTG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCAGCCCGGAGGATTTTaGCATCTGGTGATTTTTCGA +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAQPGGF*HLVIFR
Trigger: TCGAAAAATCACCAGATGCCAAAATCCTCCGGGCTG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCTTTGCCCTGATGAGTaGCTGGGCACAGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTLCPDE*LGTAQP
Trigger: GGGCTGCGCTGTGCCCAGCCACTCATCAGGGCAAAG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCACTACATCCTCCTCTTTaGACTCGCTGTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: HAAEALCGRQQHRAVVLALHPPL*TRCSPA
Trigger: AGCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAG...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTCTCTGCCAGCGTCGTaGAAATGTGGCACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSLPAS*KCGTAE
Trigger: TTCAGCTGTGCCACATTTCCACGACGCTGGCAGAGA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGGACGCAGGGTCGGATaGGGATTGGCGGCACGCACT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRGRRVG*GLAART
Trigger: AGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTGTTCCTTCCCAGGTTaGTTGGCTGTAAGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPCSFPG*LAVSLR
Trigger: ACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTGCTGTCGAATCTTCTaGAAGCAATCCACGATAGGA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDCCRIF*KQSTIG
Trigger: TCCTATCGTGGATTGCTTCCAGAAGATTCGACAGCA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTGCTGTCGAATCTTCTaGAAGCAATCCACGATAGGA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVCCRIF*KQSTIG
Trigger: TCCTATCGTGGATTGCTTCCAGAAGATTCGACAGCA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCAGAGAATCCAGGCCAGCCACTaGATGGGTGGCACACCAATG +
Preference number: 4 (lower is better)
Translates to: KESQGLEKVLWPAAEVQRIQASH*MGGTPM
Trigger: CATTGGTGTGCCACCCATCCAGTGGCTGGCCTGGAT...TCTCTGGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACACTCTCCAGGCTGCAGCGCCACATaGGTGCTGTTGCTCTTATGG +
Preference number: 4 (lower is better)
Translates to: VLHAEPPGMLRVHSAHSPGCSAT*VLLLLW
Trigger: CCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCC...TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAAGCTTCATGGATCCTaGAACGCTGAAGTCAAAATC +
Preference number: 4 (lower is better)
Translates to: PTESEVDACGAPAGWPGPKLHGS*NAEVKI
Trigger: GATTTTGACTTCAGCGTTCCAGGATCCATGAAGCTT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGTTCATGACGAGGTATaGGTAGATCTTGCCATTGTG +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDVHDEV*VDLAIV
Trigger: CACAATGGCAAGATCTACCCATACCTCGTCATGAAC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCATTCCGGGTGGCCGTaGCGGCCACAGTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRHSGWP*RPQSQP
Trigger: TGGCTGTGACTGTGGCCGCCACGGCCACCCGGAATG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACAGCAGCATGTGGGCTTaGAATCAGGCTGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: GTECFMLSLRACFVYTPHSSMWA*NQAGRA
Trigger: AGCCCGTCCAGCCTGATTCCAAGCCCACATGCTGCT...GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGACTGAGGAGATGACGTaGCATTCTCAAAATTTTCAC +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWTEEMT*HSQNFH
Trigger: GTGAAAATTTTGAGAATGTCACGTCATCTCCTCAGT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAGGAATGTAGAATACTaGGGAGATGACGTGACATTC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVRNVEY*GDDVTF
Trigger: GAATGTCACGTCATCTCCTCAGTATTCTACATTCCT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGCTCCAAGTTCTGACTaGGGCTTACACTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDAPSSD*GLHFLK
Trigger: TTTTAAGAAGTGTAAGCCTCAGTCAGAACTTGGAGC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAGGATGAGACAGAATTaGCTCCTTCTCCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVARMRQN*LLLHWN
Trigger: ATTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTCTCTTAATGGAGGATaGGACAGAATTGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVSLNGG*DRIDSF
Trigger: GAAGGAGTCAATTCTGTCTCATCCTCCATTAAGAGA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTTTGGCATCTGGTaGTTTTTCGATGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVDFGIW*FFDEGC
Trigger: ACATCCCTCATCGAAAAATCACCAGATGCCAAAATC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGCTATTCGATGACGCGTCTATGTGCGCTGTGGGCAGGAAGAGCTGGAAGGTGGGAAATGTGGCACAGCTaGACGAAAGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GYSMTRLCALWAGRAGRWEMWHS*TKALSS
Trigger: GCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTC...CCACCTTCCAGCTCTTCCTGCCCACAGCGCACATAGACGCGTCATCGAATAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTTTTTCCATACTGGATaGTCGCTGAAGCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDFFHTG*SLKLMH
Trigger: ATGCATCAGCTTCAGCGATCATCCAGTATGGAAAAA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTTTTCCATACTGGATaGTCGCTGAAGCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVFFHTG*SLKLMH
Trigger: ATGCATCAGCTTCAGCGATCATCCAGTATGGAAAAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCCTCCTCGGACTTGTTaGTCTGAGCCAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPPPRTC*SEPRTF
Trigger: GAATGTTCTTGGCTCAGATCAACAAGTCCGAGGAGG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCTCGCTGCATGTGCATaGTTCGGCTGCAGCGCCACA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTLAACA*FGCSAT
Trigger: TGTGGCGCTGCAGCCGAATCATGCACATGCAGCGAG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGCAGCGCCCACTCCTTaGGCATGCTGCGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKAAPTP*ACCAAP
Trigger: TGGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGTCACCGCTCAGGCCTaGTGCCAGCAGGACACCCAC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCVTAQA*CQQDTH
Trigger: GTGGGTGTCCTGCTGGCATCAGGCCTGAGCGGTGAC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp GTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACACTCTCCAGCTTTGCAAGGTGACTaGCGTGGAGGCAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: VLHAEPPGMLRVHSAHSPALQGD*RGGRAI
Trigger: AATAGCCCTGCCTCCACGTCAGTCACCTTGCAAAGC...TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCAAGGCTTTGCAAGGTaGCTGACGTGGAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTQGFAR*LTWRQG
Trigger: GCCCTGCCTCCACGTCAGTCACCTTGCAAAGCCTTG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTGCTGGCGGACATGGTaGACGAGGTCGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCCWRTW*TRSASV
Trigger: CACGCTGGCCGACCTCGTGCACCATGTCCGCCAGCA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTCGCTGAGGGGCAGGTaGTGGCGGACATGGTGCACG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSLRGR*WRTWCT
Trigger: CGTGCACCATGTCCGCCAGCACCTGCCCCTCAGCGA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCACCCCAGGCAGAGCTaGTTCCACGGCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTHPRQS*FHGSKF
Trigger: GAACTTGGAGCCGTGGAAGCAGCTCTGCCTGGGGTG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAGCAGGGCCAGGAGCTaGAGGGGCAGTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSRARS*RGSGHP
Trigger: GGGGTGCCCACTGCCCCTGCAGCTCCTGGCCCTGCT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAGCCTGCATGAGCTCTaGGCGCACCGGCTGGATGTG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSLHEL*AHRLDV
Trigger: CACATCCAGCCGGTGCGCGCAGAGCTCATGCAGGCT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAGCGAATGCATGGCCTaGTTCCTCACAGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSECMA*FLTVEF
Trigger: AAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATGGCTCACCAGAGAGTaGTGGCTGGCCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKWLTRE*WLASQE
Trigger: CTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCGCTCACCATGTGCTaGACCAAGTGGTGCCGTACC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTALTMC*TKWCRT
Trigger: GGTACGGCACCACTTGGTGCAGCACATGGTGAGCGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGTCCAGAAACTTGTCGTaGCTGTTGGTTAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWSRNLS*LLVSMC
Trigger: GCACATGCTAACCAACAGGCACGACAAGTTTCTGGA...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCTACTTGCACCGCTTCTaGCACAGACCAGCCCACATA +
Preference number: 4 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSYLHRF*HRPAHI
Trigger: TATGTGGGCTGGTCTGTGGCAGAAGCGGTGCAAGTA...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACGCGGATGGCCAGGCTaGTGGCCATCTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGRGWPG*WPSPPG
Trigger: GCCTGGTGGAGATGGCCAGCAGCCTGGCCATCCGCG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAACACATGAAGATAGCTGAGGGCTCCGAGAGTCTGGCATGCCGACCCGCTGCTTGTAGGAGAGGCGTGTaGACGTGGGACACTACGTGG +
Preference number: 4 (lower is better)
Translates to: KHMKIAEGSESLACRPAACRRGV*TWDTTW
Trigger: CCACGTAGTGTCCCACGTGCACACGCCTCTCCTACA...AGCAGCGGGTCGGCATGCCAGACTCTCGGAGCCCTCAGCTATCTTCATGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAGAGAAGGCTTTGTTTaGCTCCTCGGACTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAREGFV*LLGLVD
Trigger: ATCAACAAGTCCGAGGAGGCAAACAAAGCCTTCTCT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGAGTATTTCCTCGATTTaGTCTCGTTCTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWSISSI*SRSDAG
Trigger: GCCGGCATCAGAACGAGAGCAAATCGAGGAAATACT...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATCTTGTGCAGTGGCCTaGGCCCGCCGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSCAVA*ARRARD
Trigger: GTCTCTGGCCCGGCGGGCGCAGGCCACTGCACAAGA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTCTTGTGCAGTGGCCTaGGCCCGCCGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASSCAVA*ARRARD
Trigger: GTCTCTGGCCCGGCGGGCGCAGGCCACTGCACAAGA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTCTGTGCCGAGAAATTaGTCAAGAACCGGCACTTTT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVASVPRN*SRTGTF
Trigger: AAAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCCGGGGCATGAACCGTaGAATCTTGATGTAATAATG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAPGHEP*NLDVIM
Trigger: CATTATTACATCAAGATTGCACGGTTCATGCCCCGG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTGGGTTCCCCGCGCCTaGACCGTAGCCAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASWVPRA*TVASRS
Trigger: TGACCGGCTGGCTACGGTGCAGGCGCGGGGAACCCA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCAGGGGGAAGGTGTGGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCACCAGTTGAGTCTATTTAAATaGAGGACGAATTCCGCGAAG +
Preference number: 4 (lower is better)
Translates to: PGGRCGRTWQQAGPLPHQLSLFK*RTNSAK
Trigger: CTTCGCGGAATTCGTCCTGCATTTAAATAGACTCAA...CTGGTGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCACAAAAGCACGAAGCTaGTGTGAGGTGTTATTTCCG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVATKARS*CEVLFP
Trigger: CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACCCCACTGAACTTGGCTaGTGCTGTCCAGAATCGCTC +
Preference number: 4 (lower is better)
Translates to: GTECFMLSLRACFVYTPHPTELG*CCPESL
Trigger: GAGCGATTCTGGACAGCAGCAGCCAAGTTCAGTGGG...GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACTGGTCACTGAGTTGCTaGCTGAAGGGCTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: GTECFMLSLRACFVYTPHWSLSC*LKGSRL
Trigger: GAGTCTGGAGCCCTTCAGGCAGCAACTCAGTGACCA...GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCTCATGGTCACTGAGTTaGTGCCTGAAGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSSWSLS*CLKGSR
Trigger: TCTGGAGCCCTTCAGGCAGCAACTCAGTGACCATGA...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp AGCTGCCAGTACCGCCCACTGCAAACCAGCCTGCACCCAGGCCATAACCCAGCAGGAGACCTGCGGGTTTaGTTGAAATGGTGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SCQYRPLQTSLHPGHNPAGDLRV*LKWCLE
Trigger: CTCCAAACACCATTTCAAGCAAACCCGCAGGTCTCC...TGCTGGGTTATGGCCTGGGTGCAGGCTGGTTTGCAGTGGGCGGTACTGGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAGAGACCCTGGGACGTaGCGTTATTCATGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPRDPGT*RYSWLA
Trigger: AGCTAACCATGAATAACGGCACGTCCCAGGGTCTCT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTTCTTGGCGAAGAGCTaGACGGCGAGGGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTFLAKS*TARERS
Trigger: CGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGAA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGAGCTGCAGGGGCAGTaGGCACCCCAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKELQGQ*APQAEL
Trigger: CAGCTCTGCCTGGGGTGCCCACTGCCCCTGCAGCTC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCAGGGGCTCTCGGAATaGACTCCCCGCCTCGATCAG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRQGLSE*TPRLDQ
Trigger: CTGATCGAGGCGGGGAGTCCATTCCGAGAGCCCCTG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCATGGTGCTGGTGCTaGGCGAACCGGGGCGCACAG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGAWCWC*ANRGAQ
Trigger: CTGTGCGCCCCGGTTCGCCCAGCACCAGCACCATGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAAGGCTCGGAGCAGCTaGAACAGCAATTCTATATCT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAKARSS*NSNSIS
Trigger: AGATATAGAATTGCTGTTCCAGCTGCTCCGAGCCTT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTATCTCCTTCTGGATTaGGAGGTCCCAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPYLLLD*EVPRAA
Trigger: AGCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGTCAGGGCTTCCCACTaGTTCAATTCCTTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPVRASH*FNSLEH
Trigger: ATGCTCCAAGGAATTGAACCAGTGGGAAGCCCTGAC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTGCTGCTCCTCGGGGTaGCAGATGGCCAGGTATCCG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRCCSSG*QMARYP
Trigger: CGGATACCTGGCCATCTGCCACCCCGAGGAGCAGCA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCCGCCACTCGCGGATaGCCAGGCTGCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGAATRG*PGCWPS
Trigger: AGATGGCCAGCAGCCTGGCCATCCGCGAGTGGCGGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCATTTGTGCAGCTTCCTaGAGTTCGATGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAICAAS*SSMICW
Trigger: CCAGCAAATCATCGAACTCCAGGAAGCTGCACAAAT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCGATTTTTCCATACTaGATGATCGCTGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVAIFPY*MIAEAD
Trigger: ATCAGCTTCAGCGATCATCCAGTATGGAAAAATCGC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCGGTACAGGGTCCGGATaGGAAAGTAGACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPGTGSG*ESRPLG
Trigger: CCCAAGCGGTCTACTTTCCCATCCGGACCCTGTACC...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCAGGGTCTTGTGCAGTaGCCTGCGCCCGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSQGLVQ*PAPAGP
Trigger: TGGCCCGGCGGGCGCAGGCCACTGCACAAGACCCTG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGATGTAATAATGCGTTaGCTTTGGCATCAGAAACTC +
Preference number: 4 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPDVIMR*LWHQKL
Trigger: GAGTTTCTGATGCCAAAGCCAACGCATTATTACATC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAACCTGGTGGCTGGCTTaGGTTCCCCGCGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKTWWLA*VPRACT
Trigger: GGTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAATGTCGCGGAGGACCTaGTGGCTGGCTTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKMSRRT*WLAWVP
Trigger: GGGAACCCAAGCCAGCCACCAGGTCCTCCGCGACAT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCAGACCGGAGAATCCTaGCTTCTTAAAAGATTATTT +
Preference number: 4 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTQTGES*LLKRLF
Trigger: AAATAATCTTTTAAGAAGCCAGGATTCTCCGGTCTG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTCCCGCAGGGTGGCCTaGCCCCGTGGATCCACGCCG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSRRVA*PRGSTP
Trigger: CGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCCACTGAATCCGAAGTaGATGCGTGTGGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTPLNPK*MRVALP
Trigger: CGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CGTGGAGCTCATGAGAGCTCCTGGATCTTCACCGGGGAGGTGCTATCTCCTGCCGAATATGCTCTGAGCTaGCTTCCCAGGTGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: RGAHESSWIFTGEVLSPAEYALS*LPRCQV
Trigger: GACTTGGCACCTGGGAAGCCAGCTCAGAGCATATTC...GGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGTGCACCGCGGTCCTTaGGGTTGGAGACCCGTTTGG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKVHRGP*GWRPVW
Trigger: CCAAACGGGTCTCCAACCCCAAGGACCGCGGTGCAC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTTTGGAAGATTTCTTTaGACGTTAAGGGGTTCATCA +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWFGRFL*TLRGSS
Trigger: TGATGAACCCCTTAACGTTCAAAGAAATCTTCCAAA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCAGTTAAGTCCATCATaGCAAAGAGAAGTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVQLSPS*QREVLS
Trigger: TGAAAGCACTTCTCTTTGTCATGATGGACTTAACTG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGGCTTCACCAGTGTCTaGGGAGCAGCCGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRGFTSV*GAAGIR
Trigger: TCTGATCCCGGCTGCTCCTCAGACACTGGTGAAGCC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCCATTGCGTGAGCCTTaGGGAGACTATGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPPLREP*GDYEKP
Trigger: AGGTTTTTCATAGTCTCCTCAAGGCTCACGCAATGG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGATTCTTCCACGATTTTaGCCACAGCCCGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPILPRF*PQPGGF
Trigger: AAATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAAT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCACTCGTTTTTGCCCATaGCGCCTGCCAGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTTRFCP*RLPAGG
Trigger: ACCTCCAGCTGGCAGGCGTCATGGGCAAAAACGAGT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTCGCTGCATGTGCATaGTTCGGCTGCAGCGCCACA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLAACA*FGCSAT
Trigger: TGTGGCGCTGCAGCCGAATCATGCACATGCAGCGAG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAACACATGAAGATAGCTGAGGGCTCCGAGAGTCTGGCATGCCGACCCGCTGCTTACTCTGAACCTCCTTaGGGATGTCGCGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: KHMKIAEGSESLACRPAAYSEPP*GCRGGP
Trigger: AGGTCCTCCGCGACATCCTCAAGGAGGTTCAGAGTA...AGCAGCGGGTCGGCATGCCAGACTCTCGGAGCCCTCAGCTATCTTCATGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCGGTGACGGCTTTCTaGACCAGGGACACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRAVTAF*TRDTSC
Trigger: GCAACTGGTGTCCCTGGTTCAGAAAGCCGTCACCGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAATAATGGGCAATTCTaGCAACACTTTCAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWNNGQF*QHFQRK
Trigger: CTTTCTCTGAAAGTGTTGGCAGAATTGCCCATTATT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCTCCTTTCTGAGGTGTaGAGTCTCTGCTGGACAATT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPLLSEV*SLCWTI
Trigger: AATTGTCCAGCAGAGACTGCACACCTCAGAAAGGAG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATCGCTGAGGGGCAGGTaGTGGCGGACATGGTGCACG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSLRGR*WRTWCT
Trigger: CGTGCACCATGTCCGCCAGCACCTGCCCCTCAGCGA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTCGCTGAGGGGCAGGTaGTGGCGGACATGGTGCACG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASSLRGR*WRTWCT
Trigger: CGTGCACCATGTCCGCCAGCACCTGCCCCTCAGCGA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTGCTGTCAGCAGGGTTaGGTAAGGTGCGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTCCQQG*VRCATE
Trigger: CTCTGTGGCGCACCTTACGCAACCCTGCTGACAGCA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCGCCTGTCAGGGCCTaGTCAAAAGTCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRAPVRA*SKVFRA
Trigger: AGCCCGGAAGACTTTTGAGCAGGCCCTGACAGGCGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCACACTGCTGGGCGACTaGCACCATCGTATAGTGGCG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTTLLGD*HHRIVA
Trigger: CGCCACTATACGATGGTGGCAGTCGCCCAGCAGTGT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCTGTTCATAACAACATaGACACAGGCGCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPLFITT*TQALHD
Trigger: ATCGTGGAGCGCCTGTGTGCATGTTGTTATGAACAG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCATGACAAAGAGAAGTaGTTTCAGGAATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAHDKEK*FQECLL
Trigger: CAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACCTGGGCCAACACCTaGAGCGAATGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRTWANT*SECMAC
Trigger: GCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCAGGGCTTTGAAGAGTaGAGCGATGATTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPQGFEE*SDDFLP
Trigger: AGGGAGAAAATCATCGCTGCACTCTTCAAAGCCCTG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGGCGCATGGTGCTGGTaGTGGGCGAACCGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGGAWCW*WANRGA
Trigger: TGCGCCCCGGTTCGCCCAGCACCAGCACCATGCGCC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGGTCCAGGCGCATGGTaGTGGTGCTGGGCGAACCGG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGGPGAW*WCWANR
Trigger: CCGGTTCGCCCAGCACCAGCACCATGCGCCTGGACC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTCCAGCATGTCCGCCTaGTTCTCGGGGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSSMSA*FSGSRT
Trigger: GGTCCTGGACCCCGAGAAGCAGGCGGACATGCTGGA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGACGGCCAGCCGCCTCTaGTCGATGGTGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASTASRL*SMVTLG
Trigger: GCCCAGTGTCACCATCGAGCAGAGGCGGCTGGCCGT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAACGGCCAGCCGCCTCTaGTCGATGGTGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGTASRL*SMVTLG
Trigger: GCCCAGTGTCACCATCGAGCAGAGGCGGCTGGCCGT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAGCAGCTCAATGCACTaGTTGATCCAGAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSSSMH*LIQKWF
Trigger: GAACCACTTCTGGATCAAGCAGTGCATTGAGCTGCT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACGCTCCCGGGGCTCCTaGTTGACATGTGTGACCATG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKRSRGS*LTCVTM
Trigger: CATGGTCACACATGTCAAGCAGGAGCCCCGGGAGCG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCTGCACCTGGTGACTaGCGCTGCACAGAAATGGAC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTAAPGD*RCTEMD
Trigger: GTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTTTTCAAAAGCCTGGTaGTCCAACATCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPFSKAW*SNISVD
Trigger: GTCCACGCTGATGTTGGAGCACCAGGCTTTTGAAAA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACACTCTCCATGGGTGGCACACCAATaGAGTACTTGTCGACGGCAT +
Preference number: 4 (lower is better)
Translates to: VLHAEPPGMLRVHSAHSPWVAHQ*STCRRH
Trigger: ATGCCGTCGACAAGTACTGCATTGGTGTGCCACCCA...TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTCTTGTGCAGTGGCCTaGGCCCGCCGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSSCAVA*ARRARD
Trigger: GTCTCTGGCCCGGCGGGCGCAGGCCACTGCACAAGA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCGGTGTTGTGCTTCTaGACAATCTCTACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTAVLCF*TISTRG
Trigger: GCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGTACAGCCGCCGGGCTaGGGTGTTGTGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCVQPPG*GVVLLH
Trigger: GTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTAC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAACACATGAAGATAGCTGAGGGCTCCGAGAGTCTGGCATGCCGACCCGCTGCTGAGATGGGGTTGTCATaGTCGATGCCCTTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: KHMKIAEGSESLACRPAAEMGLS*SMPFLA
Trigger: CGCCAAGAAGGGCATCGAGCATGACAACCCCATCTC...AGCAGCGGGTCGGCATGCCAGACTCTCGGAGCCCTCAGCTATCTTCATGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGGGTTCCCCGCGCCTaGACCGTAGCCAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSWVPRA*TVASRS
Trigger: TGACCGGCTGGCTACGGTGCAGGCGCGGGGAACCCA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGCATTGGGGAAGGTGTaGAGCGCCCACTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKALGKV*SAHSLS
Trigger: GCTCAAGGAGTGGGCGCTGCACACCTTCCCCAATGC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCATTGTCCAGGCTGTTTaGCGCGGCCACCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTIVQAV*RGHQGV
Trigger: AACACCCTGGTGGCCGCGGCAAACAGCCTGGACAAT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGCCAGGCGGGGTCCATaGGGCACAGATTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASARRGP*GTDCPG
Trigger: GCCTGGACAATCTGTGCCGCATGGACCCCGCCTGGC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAACACATGAAGATAGCTGAGGGCTCCGAGAGTCTGGCATGCCGACCCGCTGCTAGCACAGGAGCCGCCTaGAGACTCTCAGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: KHMKIAEGSESLACRPAASTGAA*RLSEFC
Trigger: ACAGAACTCTGAGAGTCTGCAGGCGGCTCCTGTGCT...AGCAGCGGGTCGGCATGCCAGACTCTCGGAGCCCTCAGCTATCTTCATGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCTGAGCCTCCGGGCATaGTTCGTGTACACTCCGCAC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRLSLRA*FVYTPH
Trigger: GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp AGGCTTTGCAAGGTGACTGACGTGGAGGCAGGGCTATTCGATGACGCGTCTATGGAGCTGGGTACAGAGTaGTTCATGCTGAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RLCKVTDVEAGLFDDASMELGTE*FMLSLR
Trigger: CCGGAGGCTCAGCATGAAGCACTCTGTACCCAGCTC...CATAGACGCGTCATCGAATAGCCCTGCCTCCACGTCAGTCACCTTGCAAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCACAATCACTCCTCATTTaGAAAGCACGGCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: HAAEALCGRQQHRAVVLAQSLLI*KARLPS
Trigger: TGATGGGAGCCGTGCTTTGCAAATGAGGAGTGATTG...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGCCTTAGAGTCTCTCTaGCAGTATATCCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPALESL*QYILSQ
Trigger: TTGGCTCAGGATATACTGCCAGAGAGACTCTAAGGC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTCTTGGCGAAGAGCTaGACGGCGAGGGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKFLAKS*TARERS
Trigger: CGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTACCGAGCAATTGTGTaGAATTTGAGAACGAAAACC +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDYRAIV*NLRTKT
Trigger: GGTTTTCGTTCTCAAATTCCACACAATTGCTCGGTA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTACCGAGCAATTGTGTaGAATTTGAGAACGAAAACC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVYRAIV*NLRTKT
Trigger: GGTTTTCGTTCTCAAATTCCACACAATTGCTCGGTA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGAGCTGCAGGGGCAGTaGGCACCCCAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGELQGQ*APQAEL
Trigger: CAGCTCTGCCTGGGGTGCCCACTGCCCCTGCAGCTC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTTGCCAAGAAGGAATTaGCAACAATCTGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDLPRRN*QQSEEH
Trigger: ATGCTCTTCAGATTGTTGCCAATTCCTTCTTGGCAA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGAAACATGGCTGTGCTaGGCTGGCTGCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKETWLC*AGCPPG
Trigger: ACCAGGTGGGCAGCCAGCCCAGCACAGCCATGTTTC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGAAACATGGCTGTGCTaGGCTGGCTGCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRETWLC*AGCPPG
Trigger: ACCAGGTGGGCAGCCAGCCCAGCACAGCCATGTTTC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGCATGGTGCTGGTGCTaGGCGAACCGGGGCGCACAG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSAWCWC*ANRGAQ
Trigger: CTGTGCGCCCCGGTTCGCCCAGCACCAGCACCATGC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACCAGAGAGTGCTGGCTaGCCAGCCAGGAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKPESAG*PARSHR
Trigger: ACGATGACTCCTGGCTGGCCAGCCAGCACTCTCTGG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTGGCTCCTTGGCAGCTaGTGCCAATGGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRWLLGS*CQWGCS
Trigger: AGAGCACCCCCATTGGCACCAGCTGCCAAGGAGCCA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAGCAGTTCAGCGCGCTaGGCTGGCAGTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSSSAR*AGSPAA
Trigger: TGCAGCGGGACTGCCAGCCCAGCGCGCTGAACTGCT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGGACGCAGGGTCGGATaGGGATTGGCGGCACGCACT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKGRRVG*GLAART
Trigger: AGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCACGATAGGAACAGTTaGAATAGTATGAATCCGACT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDHDRNS*NSMNPT
Trigger: AGTCGGATTCATACTATTCCAACTGTTCCTATCGTG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCAGGTGAGCAGCTGTaGGATCCAGGCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCAGEQL*DPGQPL
Trigger: CAGTGGCTGGCCTGGATCCCACAGCTGCTCACCTGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGGTACAGGGTCCGGATaGGAAAGTAGACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTGTGSG*ESRPLG
Trigger: CCCAAGCGGTCTACTTTCCCATCCGGACCCTGTACC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCAGGGTCTTGTGCAGTaGCCTGCGCCCGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGQGLVQ*PAPAGP
Trigger: TGGCCCGGCGGGCGCAGGCCACTGCACAAGACCCTG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAAGCTTCATGGATCCTaGAACGCTGAAGTCAAAATC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAKLHGS*NAEVKI
Trigger: GATTTTGACTTCAGCGTTCCAGGATCCATGAAGCTT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCACGAGGCGCATCTGTaGGGAAACTGCCACAACCCG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRHEAHL*GNCHNP
Trigger: CGGGTTGTGGCAGTTTCCCCACAGATGCGCCTCGTG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCTCGATGCCCTTCTTaGCGCAGCGCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTARCPS*RSAACR
Trigger: TCTACAAGCAGCGCTGCGCCAAGAAGGGCATCGAGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGACCTGGTGGCTGGCTTaGGTTCCCCGCGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGTWWLA*VPRACT
Trigger: GGTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAGTAGTCCGTGGCATTaGGGAAGGTGTGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSSPWH*GRCAAP
Trigger: GGGCGCTGCACACCTTCCCCAATGCCACGGACTACT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGCTGTCCATGTTCTCTaGCTGCCCGGCGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKAVHVL*LPGGRE
Trigger: CTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTCCCGCAGGGTGGCCTaGCCCCGTGGATCCACGCCG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYSRRVA*PRGSTP
Trigger: CGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGCTCCCGCAGGGTaGCCTGGCCCCGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWGAPAG*PGPVDP
Trigger: TGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACCACTGAATCCGAAGTaGATGCGTGTGGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKPLNPK*MRVALP
Trigger: CGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTATGGCGTGTGCTCCTTaGGGACTGCCCCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCMACAP*GLPLPH
Trigger: GTGTGGGAGGGGCAGTCCCCAAGGAGCACACGCCAT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp AGGCTTTGCAAGGTGACTGACGTGGAGGCAGGGCTATTCGATGACGCGTCTATGAGACGACTCACACAGTaGCCCAGGCCTTGTCACACG +
Preference number: 4 (lower is better)
Translates to: RLCKVTDVEAGLFDDASMRRLTQ*PRPCHT
Trigger: CGTGTGACAAGGCCTGGGCCACTGTGTGAGTCGTCT...CATAGACGCGTCATCGAATAGCCCTGCCTCCACGTCAGTCACCTTGCAAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTTTGGAAGATTTCTTTaGACGTTAAGGGGTTCATCA +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDFGRFL*TLRGSS
Trigger: TGATGAACCCCTTAACGTTCAAAGAAATCTTCCAAA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTTGGAAGATTTCTTTaGACGTTAAGGGGTTCATCA +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVFGRFL*TLRGSS
Trigger: TGATGAACCCCTTAACGTTCAAAGAAATCTTCCAAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCCACCAGGAAGCATTTaGTCACTTCCCACGCCTGCC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRPPGSI*SLPTPA
Trigger: GGCAGGCGTGGGAAGTGATCAAATGCTTCCTGGTGG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCCGGCTGCTGGTCCTTaGTCCTCTGCAGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASPAAGP*SSAAPT
Trigger: AGTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCTTCCTGACGCTGCCTaGGGGTTTAAATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRLPDAA*GFKCSR
Trigger: CCGGGAGCATTTAAACCCTCAGGCAGCGTCAGGAAG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTCCCGCTGCACCTGGTaGCTGCCGCTGCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSRCTW*LPLHRN
Trigger: ATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGGACGAGGTAGGGGTTaGTGTGGCCTTTGGACTGAC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKGRGRG*CGLWTD
Trigger: GTCAGTCCAAAGGCCACATCAACCCCTACCTCGTCC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACTCGTTTTTGCCCATaGCGCCTGCCAGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRTRFCP*RLPAGG
Trigger: ACCTCCAGCTGGCAGGCGTCATGGGCAAAAACGAGT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAACTCGTTTTTGCCCATaGCGCCTGCCAGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKTRFCP*RLPAGG
Trigger: ACCTCCAGCTGGCAGGCGTCATGGGCAAAAACGAGT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACGTGCAGGTAGCAGGTaGTGGCAGACACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKRAGSR*WQTRPG
Trigger: ACCTGGGCGTGTCTGCCATCACCTGCTACCTGCACG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGATTTGCTCTCGTTCTaGTGCCGGCAGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCDLLSF*CRQACR
Trigger: CCTGCACGCCTGCCGGCATCAGAACGAGAGCAAATC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGCTATTCGATGACGCGTCTATGTGCGCTGTGGGCAGGAAGAGCTGGAAGGTGGTGGCCTTTCAGCTTCTaGAAGACAGGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GYSMTRLCALWAGRAGRWWPFSF*KTGSCA
Trigger: TGCACAAGACCCTGTCTTTCAGAAGCTGAAAGGCCA...CCACCTTCCAGCTCTTCCTGCCCACAGCGCACATAGACGCGTCATCGAATAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGACGCTCCTCTCGCCGTaGCTCTGTGAGGCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGTLLSP*LCEAGV
Trigger: GACGCCTGCCTCACAGAGTCACGGCGAGAGGAGCGT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCTCCACAAGGGAAAGTaGAGAGGGGTTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTLHKGK*RGVVLH
Trigger: GTGGAGGACAACCCCTCTTCACTTTCCCTTGTGGAG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGCAGCGCCCACTCCTTaGGCATGCTGCGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGAAPTP*ACCAAP
Trigger: TGGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGCAGCGCCCACTCCTTaGGCATGCTGCGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKAAPTP*ACCAAP
Trigger: TGGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGAGCCAGCTGGATGGTaGACATCTTCCGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGREPAGW*TSSGTS
Trigger: GGACGTTCCGGAAGATGTTCACCATCCAGCTGGCTC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGAGCCAGCTGGATGGTaGACATCTTCCGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKEPAGW*TSSGTS
Trigger: GGACGTTCCGGAAGATGTTCACCATCCAGCTGGCTC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GGCTATTCGATGACGCGTCTATGTGCGCTGTGGGCAGGAAGAGCTGGAAGGTGGATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GYSMTRLCALWAGRAGRWITATQ*NYGASV
Trigger: CACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTAT...CCACCTTCCAGCTCTTCCTGCCCACAGCGCACATAGACGCGTCATCGAATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CCACTGCACCCAGCAGGGGTTGAACTTTTTAAGCCAATTGCGGAAACATGCCCTCAGAGTGCTTCATGCTaGGCCTCCGGGCATGCTTCG +
Preference number: 4 (lower is better)
Translates to: PLHPAGVELFKPIAETCPQSASC*ASGHAS
Trigger: CGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTG...AGGGCATGTTTCCGCAATTGGCTTAAAAAGTTCAACCCCTGCTGGGTGCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCACCACCCCTCTGGGCTaGGGGCTGGAGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGTTPLG*GLEPST
Trigger: TGTGCTGGGCTCCAGCCCTCAGCCCAGAGGGGTGGT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTCTTTTGGGCTGGTTTaGTTCTCAAGAGAAAAGTAT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSFGLV*FSREKY
Trigger: ATACTTTTCTCTTGAGAAGCAAACCAGCCCAAAAGA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCCATTGCCACTCTCCTaGTCGCTCTTGGAACGGATG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTPLPLS*SLLERM
Trigger: CATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAGCCTGCATGAGCTCTaGGCGCACCGGCTGGATGTG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSLHEL*AHRLDV
Trigger: CACATCCAGCCGGTGCGCGCAGAGCTCATGCAGGCT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTGCTGTCAGCAGGGTTaGGTAAGGTGCGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRCCQQG*VRCATE
Trigger: CTCTGTGGCGCACCTTACGCAACCCTGCTGACAGCA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACACCGCATCAGAAGCTaGTCCAGCGTGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKHRIRS*SSVVFA
Trigger: GGCAAAGACCACGCTGGAGCAGCTTCTGATGCGGTG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTACCTGGGCCAACACCTaGAGCGAATGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCTWANT*SECMAC
Trigger: GCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACATCAGGCCAATCTGTaGGTTGGCAGGCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKHQANL*VGRLVS
Trigger: CGACACCAGCCTGCCAACGCACAGATTGGCCTGATG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGGAGGTCCCAAGAGCTaGTCTCCTTCCCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKGGPKS*SPSPFS
Trigger: TGAGAAGGGGGAAGGAGAGCAGCTCTTGGGACCTCC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTGGGTCAGCATCTGGTaGCCGTCCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASWVSIW*PSSILA
Trigger: GGCCAGGATGGAGGACGGGCACCAGATGCTGACCCA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAGAATGTGGACCAGCTaGGGGACGGTGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKRMWTS*GTVCPS
Trigger: GGAGGGGCACACCGTCCCGCAGCTGGTCCACATTCT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCGCTCACCATGTGCTaGACCAAGTGGTGCCGTACC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCALTMC*TKWCRT
Trigger: GGTACGGCACCACTTGGTGCAGCACATGGTGAGCGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGATGGCGCTCACCATGTaGTGCACCAAGTGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRMALTM*CTKWCR
Trigger: ACGGCACCACTTGGTGCAGCACATGGTGAGCGCCAT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATCGCCGTCAGCTCGCTaGCAGAGAGGGTCTCATCCC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSPSAR*QRGSHP
Trigger: GGGATGAGACCCTCTCTGGCAGCGAGCTGACGGCGA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTCGCCGTCAGCTCGCTaGCAGAGAGGGTCTCATCCC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASSPSAR*QRGSHP
Trigger: GGGATGAGACCCTCTCTGGCAGCGAGCTGACGGCGA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCCTGTTGGTTAGCATGTaGAGCTGGTTTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSLLVSM*SWFPMS
Trigger: GGACATTGGAAACCAGCTGCACATGCTAACCAACAG...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCCCGCGAGTGCATGCTaGTGTCTGTCAGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRPASAC*CLSERI
Trigger: GATCCTCTCTGACAGACAGCAGCATGCACTCGCGGG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATCACCCGCGAGTGCATaGTGCTGTCTGTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSPASA*CCLSER
Trigger: CCTCTCTGACAGACAGCAGCATGCACTCGCGGGTGA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGCTGCACCTGGTGACTaGCGCTGCACAGAAATGGAC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKAAPGD*RCTEMD
Trigger: GTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTCCAGTATCTCCTGCTaGGGCGGGGTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSSISC*GGVMLS
Trigger: GGAGAGCATCACCCCGCCGCAGCAGGAGATACTGGA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGAATCCAGTATCTCCTaGTGCGGCGGGGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRESSIS*CGGVML
Trigger: GAGCATCACCCCGCCGCAGCAGGAGATACTGGATTC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AGGCTTTGCAAGGTGACTGACGTGGAGGCAGGGCTATTCGATGACGCGTCTATGCTGTCTCCGAGTACTTaGACCGCTTCTGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: RLCKVTDVEAGLFDDASMLSPST*TASATD
Trigger: GTCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAG...CATAGACGCGTCATCGAATAGCCCTGCCTCCACGTCAGTCACCTTGCAAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCTGTCTCCGAGTACTTaGACCGCTTCTGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTLSPST*TASATD
Trigger: GTCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCAGCTCACTTCCACCTaGACCAGCGCCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRQLTST*TSASFM
Trigger: CATGAAGGAGGCGCTGGTGCAGGTGGAAGTGAGCTG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTCAGCTCACTTCCACCTaGACCAGCGCCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLQLTST*TSASFM
Trigger: CATGAAGGAGGCGCTGGTGCAGGTGGAAGTGAGCTG...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACGCGGATGGCCAGGCTaGTGGCCATCTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKRGWPG*WPSPPG
Trigger: GCCTGGTGGAGATGGCCAGCAGCCTGGCCATCCGCG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCTTTGCCCATGACGCCTaGCAGCTGGAGGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPFAHDA*QLEVAF
Trigger: AAATGCTACCTCCAGCTGGCAGGCGTCATGGGCAAA...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAGAGAAGGCTTTGTTTaGCTCCTCGGACTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPREGFV*LLGLVD
Trigger: ATCAACAAGTCCGAGGAGGCAAACAAAGCCTTCTCT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGCAGACACGCCCAGGTaGAGCTGCCGCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASADTPR*SCRSFT
Trigger: TGTGAAGGAGCGGCAGCTGCACCTGGGCGTGTCTGC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGCAGACACGCCCAGGTaGAGCTGCCGCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKADTPR*SCRSFT
Trigger: TGTGAAGGAGCGGCAGCTGCACCTGGGCGTGTCTGC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAGCTCTCGCTGCATGTaGATGATTCGGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSSRCM*MIRLQR
Trigger: GCGCTGCAGCCGAATCATGCACATGCAGCGAGAGCT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCAGAGACTCAGAGGCTaGGCTGGAGAACATGGTCGA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTQRLRG*AGEHGR
Trigger: TCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTCTGTGCCGAGAAATTaGTCAAGAACCGGCACTTTT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSVPRN*SRTGTF
Trigger: AAAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCACTTCAGCTGTCTGTaGCGAGAAATTGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPHFSCL*REIAQE
Trigger: TTCTTGAGCAATTTCTCGGCACAGACAGCTGAAGTG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTGCGGTGTTGTGCTTCTaGACAATCTCTACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLAVLCF*TISTRG
Trigger: GCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGC...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTAGCAGACGCAGCAGCTaGAACACACGCTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSRRSS*NTRSSR
Trigger: GCGAGAGGAGCGTGTGTTGCAGCTGCTGCGTCTGCT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGACTGTGAAAAACAAGTaGCTCTTGGTGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWTVKNK*LLVVSF
Trigger: AAAGGAGACCACCAAGAGGCACTTGTTTTTCACAGT...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGGTTGTCATGCTCGATaGCCTTCTTGGCGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRGCHAR*PSWRSA
Trigger: AGCGCTGCGCCAAGAAGGGCATCGAGCATGACAACC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGAGATGGGGTTGTCATaGTCGATGCCCTTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTEMGLS*SMPFLA
Trigger: CGCCAAGAAGGGCATCGAGCATGACAACCCCATCTC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTGGGTTCCCCGCGCCTaGACCGTAGCCAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGWVPRA*TVASRS
Trigger: TGACCGGCTGGCTACGGTGCAGGCGCGGGGAACCCA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTTGAGTCTATTTAAATaGAGGACGAATTCCGCGAAG +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVALSLFK*RTNSAK
Trigger: CTTCGCGGAATTCGTCCTGCATTTAAATAGACTCAA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATCCATGTTCTCTGGCTaGCCGGCGGCCGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSMFSG*PAAERG
Trigger: TCCTCTCTCGGCCGCCGGGCAGCCAGAGAACATGGA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKRSRKS*GLRARS
Trigger: GCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 4 (lower is better)
Translates to: HAAEALCGRQQHRAVVLANKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CGTGGAGCTCATGAGAGCTCCTGGATCTTCACCGGGGAGGTGCTATCTCCTGCCACTGCGATCTCAAGCTaGCAAGGGACATCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: RGAHESSWIFTGEVLSPATAISS*QGTSCQ
Trigger: TTGACAAGATGTCCCTTGGCAGCTTGAGATCGCAGT...GGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTCTTCACCGGGGAGGTaGTATCTCCTGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSSPGR*YLLPWP
Trigger: TGGCCAAGGCAGGAGATAGCACCTCCCCGGTGAAGA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTGATGACGCGTCTATGTaGGCTGTGGGCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLDDASM*AVGRKS
Trigger: GCTCTTCCTGCCCACAGCGCACATAGACGCGTCATC...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACACTCTCCAGATACTCCTCACCGATaGAGAGCAAAAACCCCGCTT +
Preference number: 4 (lower is better)
Translates to: VLHAEPPGMLRVHSAHSPDTPHR*RAKTPL
Trigger: AAGCGGGGTTTTTGCTCTGCATCGGTGAGGAGTATC...TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCAATTTGAAAGTAACTaGAGCATTCCTTTCACCATC +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVQFESN*SIPFTI
Trigger: GATGGTGAAAGGAATGCTCCAGTTACTTTCAAATTG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCTGAGCCAATTAGTATaGATTCATCAAACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDLSQLV*IHQTAC
Trigger: ACAAGCTGTTTGATGAATCCATACTAATTGGCTCAG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCTGAGGGGCAGGTGCTaGCGGACATGGTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLRGRC*RTWCTR
Trigger: CCTCGTGCACCATGTCCGCCAGCACCTGCCCCTCAG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTCTTGGCGAAGAGCTaGACGGCGAGGGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCFLAKS*TARERS
Trigger: CGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATGGTCTGGATGCTGCTaGGCAGGGACTCATCGTCGA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKWSGCC*AGTHRR
Trigger: TCGACGATGAGTCCCTGCCCAGCAGCATCCAGACCA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGGAGCTTGCAGGACATaGTCTGGATGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRGACRT*SGCCWA
Trigger: TGCCCAGCAGCATCCAGACCATGTCCTGCAAGCTCC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTTGCCAAGAAGGAATTaGCAACAATCTGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVALPRRN*QQSEEH
Trigger: ATGCTCTTCAGATTGTTGCCAATTCCTTCTTGGCAA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAGTGGCGGATCAAGCTaGCGACAAAGGGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASSGGSS*RQRAGR
Trigger: GCGCCCTGCCCTTTGTCGCCAGCTTGATCCGCCACT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCCTGCAGCGAATGCATaGCCTGCTTCCTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRPAANA*PASSQW
Trigger: CCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTCTGGCCCCCTTTGTaGGTGATCACCACCACTTCC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLWPPL*VITTTS
Trigger: GGAAGTGGTGGTGATCACCCACAAAGGGGGCCAGAG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCCACCAGCAGCGTaGCGTACTGCAGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCAPPAA*RTAAGR
Trigger: TCTACCTGCTGCAGTACGCCACGCTGCTGGTGGAGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGGTCCACGCAGGCCTTaGAGAGCAGGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGGPRRP*RAGRAR
Trigger: CCTGGCCCTGCCTGCTCTCCAAGGCCTGCGTGGACC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCCCGTCCTCCATCCTaGCCGGCACCGCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSARPPS*PAPPGS
Trigger: TGACCCCGGCGGTGCCGGCCAGGATGGAGGACGGGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCCCGTCCTCCATCCTaGCCGGCACCGCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLARPPS*PAPPGS
Trigger: TGACCCCGGCGGTGCCGGCCAGGATGGAGGACGGGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTAGCCCAGCCTCTGCATaGCGCTCACCATGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSPASA*RSPCAA
Trigger: TGCAGCACATGGTGAGCGCCATGCAGAGGCTGGGCT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCTCCAGGTAGCGACTaGCTCCTCCCAAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRAPGSD*LLPKTA
Trigger: TGCAGTCTTTGGGAGGAGCCAGTCGCTACCTGGAGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTGGTTTTGGGCGTGCTaGTCTGATCCCCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTWFWAC*SDPQEL
Trigger: TAGCTCCTGGGGATCAGACCAGCACGCCCAAAACCA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCTCTCTGCCAGCGTCGTaGAAATGTGGCACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPSLPAS*KCGTAE
Trigger: TTCAGCTGTGCCACATTTCCACGACGCTGGCAGAGA...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp AGGCTTTGCAAGGTGACTGACGTGGAGGCAGGGCTATTCGATGACGCGTCTATGGCTCCAACATCAGCGTaGACCGGAACCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RLCKVTDVEAGLFDDASMAPTSA*TGTRGC
Trigger: ACAACCTCTGGTTCCGGTCCACGCTGATGTTGGAGC...CATAGACGCGTCATCGAATAGCCCTGCCTCCACGTCAGTCACCTTGCAAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGACTGGTTCAATTCCTTaGAGCATCGAATCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPTGSIP*SIESSG
Trigger: ACCACTGGATTCGATGCTCCAAGGAATTGAACCAGT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCCTCGGGGTGGCAGATaGCCAGGTATCCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASPRGGR*PGIRGT
Trigger: TGTACCGCGGATACCTGGCCATCTGCCACCCCGAGG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGGATGGCCAGGCTGCTaGCCATCTCCACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGGWPGC*PSPPGA
Trigger: AGCGCCTGGTGGAGATGGCCAGCAGCCTGGCCATCC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGCCGCCACTCGCGGATaGCCAGGCTGCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGAATRG*PGCWPS
Trigger: AGATGGCCAGCAGCCTGGCCATCCGCGAGTGGCGGC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTACGTGGGACACTACGTaGGGCAGCCGCCGCCACTCG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGTWDTT*GSRRHS
Trigger: CGAGTGGCGGCGGCTGCCCCACGTAGTGTCCCACGT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGGTAGTCGCCCCACATaGCCCAGGCTTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCGSRPT*PRLSPA
Trigger: TGCTGGTGAAAGCCTGGGCCATGTGGGGCGACTACC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGAAAGCCACAGCACCTTaGCTAAGTATTTCCTCGATT +
Preference number: 4 (lower is better)
Translates to: GSARCHQEATLRSPHCLWKATAP*LSISSI
Trigger: AATCGAGGAAATACTTAGCCAAGGTGCTGTGGCTTT...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGCAGGTGAGCAGCTGTaGGATCCAGGCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKAGEQL*DPGQPL
Trigger: CAGTGGCTGGCCTGGATCCCACAGCTGCTCACCTGC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACAGGGTCTTGTGCAGTaGCCTGCGCCCGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLQGLVQ*PAPAGP
Trigger: TGGCCCGGCGGGCGCAGGCCACTGCACAAGACCCTG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGATGTAATAATGCGTTaGCTTTGGCATCAGAAACTC +
Preference number: 4 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVADVIMR*LWHQKL
Trigger: GAGTTTCTGATGCCAAAGCCAACGCATTATTACATC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCACCTGGTGGCTGGCTTaGGTTCCCCGCGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGTWWLA*VPRACT
Trigger: GGTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGGAGGACCTGGTGGCTaGCTTGGGTTCCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKGGPGG*LGFPAP
Trigger: AGGCGCGGGGAACCCAAGCCAGCCACCAGGTCCTCC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTCGCGGAGGACCTGGTaGCTGGCTTGGGTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSRRTW*LAWVPR
Trigger: GCGGGGAACCCAAGCCAGCCACCAGGTCCTCCGCGA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTAGTAGTCCGTGGCATTaGGGAAGGTGTGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSSPWH*GRCAAP
Trigger: GGGCGCTGCACACCTTCCCCAATGCCACGGACTACT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCATTCCGGGTGGCCGTaGCGGCCACAGTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSHSGWP*RPQSQP
Trigger: TGGCTGTGACTGTGGCCGCCACGGCCACCCGGAATG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACCTTCACATTCCGGGTaGCCGTGGCGGCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGPSHSG*PWRPQS
Trigger: TGACTGTGGCCGCCACGGCCACCCGGAATGTGAAGG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGGTGGCCTGGCCCCGTaGATCCACGCCGAACGCTCA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGGGLAP*IHAERS
Trigger: TGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCCCGCAGGGTGGCCTaGCCCCGTGGATCCACGCCG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSRRVA*PRGSTP
Trigger: CGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGGCGCTCCCGCAGGGTaGCCTGGCCCCGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQGAPAG*PGPVDP
Trigger: TGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACACTCTCCATTACTGTGTGTTGATTaGGCACAGTGGCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VLHAEPPGMLRVHSAHSPLLCVD*AQWLPA
Trigger: TGCTGGGAGCCACTGTGCCCAATCAACACACAGTAA...TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTCACTGTACATCCTCTaGGTCACAATTTTGTATTTT +
Preference number: 4 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWSLYIL*VTILYF
Trigger: AAAATACAAAATTGTGACCCAGAGGATGTACAGTGA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACATAGACTTGAACGACTaGAAGTCGAACACGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GTECFMLSLRACFVYTPHIDLND*KSNTRL
Trigger: CAGCCGCGTGTTCGACTTCCAGTCGTTCAAGTCTAT...GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTTGTACCTGCTGAGGTaGCTTCGGTGCTTCCTGACG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTLYLLR*LRCFLT
Trigger: CGTCAGGAAGCACCGAAGCCACCTCAGCAGGTACAA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
3UTR CAA 72 bp TCCTGGATCTTCACCGGGGAGGTGCTATCTCCTGCCTaGGCCATTCCAAGGTTGGTTTTCCCAACAACCAGG +
Preference number: 4 (lower is better)
Translates to: SWIFTGEVLSPA*AIPRLVFPTTR
Trigger: CCTGGTTGTTGGGAAAACCAACCTTGGAATGGCCAAGGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTGTGCAGGCCACTCTaGAGCATGTTCAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLCRPL*SMFSPC
Trigger: GCAAGGGCTGAACATGCTTCAGAGTGGCCTGCACAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGCCACAGAGCCTGCATaGGCTCTGCGCGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSATEPA*ALRAPA
Trigger: AGCCGGTGCGCGCAGAGCTCATGCAGGCTCTGTGGC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCCACAGAGCCTGCATaGGCTCTGCGCGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPATEPA*ALRAPA
Trigger: AGCCGGTGCGCGCAGAGCTCATGCAGGCTCTGTGGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCGGAAAACTCCACAGTaGTGCTGGGGCCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCRKTPQ*CWGPEP
Trigger: AGGTTCAGGGCCCCAGCATCACTGTGGAGTTTTCCG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTGGGAAGAGCCTCGTaGCCGAAGTCAGGCGATTCA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLGRAS*PKSGDS
Trigger: TGAATCGCCTGACTTCGGTCACGAGGCTCTTCCCAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATGGCCATCGCCTGTCTaGCGATCGCTCGAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGWPSPV*RSLELP
Trigger: TGGAAGCTCGAGCGATCGTCAGACAGGCGATGGCCA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCTTCCTGACGCTGCCTaGGGGTTTAAATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLPDAA*GFKCSR
Trigger: CCGGGAGCATTTAAACCCTCAGGCAGCGTCAGGAAG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCTGTAAGCCTGCGTTaGTTTGTGCAGCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTAVSLR*FVQLPG
Trigger: TCCAGGAAGCTGCACAAATCAACGCAGGCTTACAGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCAGAGATCGGACTTGTTGATCTaGGCCAAGAACATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KESQGLEKVLWPAAEVQRSDLLI*AKNIPF
Trigger: GAAGGGAATGTTCTTGGCTCAGATCAACAAGTCCGA...TCTCTGGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGATTTGCTCTCGTTCTaGTGCCGGCAGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKDLLSF*CRQACR
Trigger: CCTGCACGCCTGCCGGCATCAGAACGAGAGCAAATC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACTCGCTGCATGTGCATaGTTCGGCTGCAGCGCCACA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGLAACA*FGCSAT
Trigger: TGTGGCGCTGCAGCCGAATCATGCACATGCAGCGAG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCACGCTCCTCTCGCCGTaGCTCTGTGAGGCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGTLLSP*LCEAGV
Trigger: GACGCCTGCCTCACAGAGTCACGGCGAGAGGAGCGT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTACTCTGAACCTCCTTaGGGATGTCGCGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRYSEPP*GCRGGP
Trigger: AGGTCCTCCGCGACATCCTCAAGGAGGTTCAGAGTA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATACTCTGAACCTCCTTaGGGATGTCGCGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKYSEPP*GCRGGP
Trigger: AGGTCCTCCGCGACATCCTCAAGGAGGTTCAGAGTA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCAGCGCCCACTCCTTaGGCATGCTGCGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLAAPTP*ACCAAP
Trigger: TGGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGCGGTGACGGCTTTCTaGACCAGGGACACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASAVTAF*TRDTSC
Trigger: GCAACTGGTGTCCCTGGTTCAGAAAGCCGTCACCGC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTTCCACGTGGAGCTCATaGGAGCTCCTGGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLSTWSS*ELLDLH
Trigger: GTGAAGATCCAGGAGCTCTCATGAGCTCCACGTGGA...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTCTACGAGAAGCTGCTaGCAGCCGTGGAGGAGACCT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSTRSC*QPWRRP
Trigger: AGGTCTCCTCCACGGCTGTCAGCAGCTTCTCGTAGA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGGACGTCTCTCCCATTaGCACTCTCCTGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCGRLSH*HSPARS
Trigger: AGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTCCAGCGTGGTCTTTaGCATAGCGACTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLQRGL*HSDCPI
Trigger: AATGGGGCAGTCGCTATGGCAAAGACCACGCTGGAG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGTGAAGAGCCTGGGCTaGAACGTGGTACAGAACGTG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKVKSLG*NVVQNV
Trigger: CACGTTCTGTACCACGTTGCAGCCCAGGCTCTTCAC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAACAGCTCCACTGTCTaGGAGGGATGTCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRNSSTV*EGCRVR
Trigger: CCTGACTCGACATCCCTCGCAGACAGTGGAGCTGTT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGGCTCACCAGAGAGTaGTGGCTGGCCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSWLTRE*WLASQE
Trigger: CTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGGCTCACCAGAGAGTaGTGGCTGGCCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGWLTRE*WLASQE
Trigger: CTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACGCTCGAGCTTCCATTaGGTGAGCCTTGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKRSSFH*VSLEET
Trigger: AGTCTCCTCAAGGCTCACGCAATGGAAGCTCGAGCG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCACGGCCAGCCGCCTCTaGTCGATGGTGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGTASRL*SMVTLG
Trigger: GCCCAGTGTCACCATCGAGCAGAGGCGGCTGGCCGT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACTGAGGTGGCTTCGGTaGTTCCTGACGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGLRWLR*FLTLPE
Trigger: CTCAGGCAGCGTCAGGAAGCACCGAAGCCACCTCAG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCGCCGTCAGCTCGCTaGCAGAGAGGGTCTCATCCC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSPSAR*QRGSHP
Trigger: GGGATGAGACCCTCTCTGGCAGCGAGCTGACGGCGA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCGCTCCCGGGGCTCCTaGTTGACATGTGTGACCATG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASRSRGS*LTCVTM
Trigger: CATGGTCACACATGTCAAGCAGGAGCCCCGGGAGCG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCTGTCTCCGAGTACTTaGACCGCTTCTGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRLSPST*TASATD
Trigger: GTCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTTGGCTTTATCCATTaGCTTTTCATAGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: TESEVDACGAPAGWPGPVFGFIH*LFIGFL
Trigger: CAAGAATCCTATGAAAAGGCAATGGATAAAGCCAAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCGCGGATGGCCAGGCTaGTGGCCATCTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSRGWPG*WPSPPG
Trigger: GCCTGGTGGAGATGGCCAGCAGCCTGGCCATCCGCG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACGCGGATGGCCAGGCTaGTGGCCATCTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLRGWPG*WPSPPG
Trigger: GCCTGGTGGAGATGGCCAGCAGCCTGGCCATCCGCG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTTTGCCCATGACGCCTaGCAGCTGGAGGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTFAHDA*QLEVAF
Trigger: AAATGCTACCTCCAGCTGGCAGGCGTCATGGGCAAA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTGGGTGGCACACCAATaGAGTACTTGTCGACGGCAT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTWVAHQ*STCRRH
Trigger: ATGCCGTCGACAAGTACTGCATTGGTGTGCCACCCA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAGGCCCTGTTGGAGCTaGCTGAGAACCTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKRPCWS*LRTSSC
Trigger: GCATGAAGAGGTTCTCAGGCAGCTCCAACAGGGCCT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTCTTGTGCAGTGGCCTaGGCCCGCCGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWSCAVA*ARRARD
Trigger: GTCTCTGGCCCGGCGGGCGCAGGCCACTGCACAAGA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAAAGACAGGGTCTTGTaGAGTGGCCTGCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGKDRVL*SGLRPP
Trigger: CGGCGGGCGCAGGCCACTGCACAAGACCCTGTCTTT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAGCAGACGCAGCAGCTaGAACACACGCTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSRRSS*NTRSSR
Trigger: GCGAGAGGAGCGTGTGTTGCAGCTGCTGCGTCTGCT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTGGGTTCCCCGCGCCTaGACCGTAGCCAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPWVPRA*TVASRS
Trigger: TGACCGGCTGGCTACGGTGCAGGCGCGGGGAACCCA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGCATTGGGGAAGGTGTaGAGCGCCCACTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKALGKV*SAHSLS
Trigger: GCTCAAGGAGTGGGCGCTGCACACCTTCCCCAATGC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCCATGTTCTCTGGCTaGCCGGCGGCCGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSMFSG*PAAERG
Trigger: TCCTCTCTCGGCCGCCGGGCAGCCAGAGAACATGGA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAACTGGGCGAGGTTGTaGAGGCGGGTCATGATGGCG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKNWARL*RRVMMA
Trigger: CGCCATCATGACCCGCCTGCACAACCTCGCCCAGTT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTATTGTCCAGGCTGTTTaGCGCGGCCACCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCIVQAV*RGHQGV
Trigger: AACACCCTGGTGGCCGCGGCAAACAGCCTGGACAAT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAGCACAGGAGCCGCCTaGAGACTCTCAGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSTGAA*RLSEFC
Trigger: ACAGAACTCTGAGAGTCTGCAGGCGGCTCCTGTGCT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATCCGAGAGTCTGGCATaGCGACCCGCTGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSESLA*RPAAEI
Trigger: GATCTCAGCAGCGGGTCGGCATGCCAGACTCTCGGA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTCATCAAAGTGGTCTaGTCAACCACCGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKFIKVV*STTVAP
Trigger: GGGGGCCACGGTGGTTGACCAGACCACTTTGATGAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTGAGGGGCAGGTGCTaGCGGACATGGTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLRGRC*RTWCTR
Trigger: CCTCGTGCACCATGTCCGCCAGCACCTGCCCCTCAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATTCTTGGCGAAGAGCTaGACGGCGAGGGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGFLAKS*TARERS
Trigger: CGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGAA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGGCCAATCTGTGCGTTaGCAGGCTGGTGTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKGQSVR*QAGVGA
Trigger: TGCTCCGACACCAGCCTGCCAACGCACAGATTGGCC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTGATGGCCTGGAACTaGAGGTCCAGGCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLMAWN*RSRRMV
Trigger: CACCATGCGCCTGGACCTCCAGTTCCAGGCCATCAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACCAGAGAGTGCTGGCTaGCCAGCCAGGAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGPESAG*PARSHR
Trigger: ACGATGACTCCTGGCTGGCCAGCCAGCACTCTCTGG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCCAGAGAGTGCTGGCTaGCCAGCCAGGAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASPESAG*PARSHR
Trigger: ACGATGACTCCTGGCTGGCCAGCCAGCACTCTCTGG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCTCACCAGAGAGTGCTaGCTGGCCAGCCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASLTREC*LASQES
Trigger: TGACTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATGGGCTCCTTCCAGTTaGTGGCTGCCATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKWAPSS*WLPCSP
Trigger: AGGAGAACATGGCAGCCACCAACTGGAAGGAGCCCA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATTGTCATGGATGTGGTaGGGGGCGTGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGLSWMW*GACSTS
Trigger: GCTGGTGGAGCACGCCCCCCACCACATCCATGACAA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTTGTCATGGATGTGGTaGGGGGCGTGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASLSWMW*GACSTS
Trigger: GCTGGTGGAGCACGCCCCCCACCACATCCATGACAA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCTGTACTTGCAGGCTaGGTCCACGCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGAVLAG*VHAGLG
Trigger: TCCAAGGCCTGCGTGGACCCAGCCTGCAAGTACAGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGCCCGTCCTCCATCCTaGCCGGCACCGCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTARPPS*PAPPGS
Trigger: TGACCCCGGCGGTGCCGGCCAGGATGGAGGACGGGC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTATCAGGTGCAGAATGTaGACCAGCTGCGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCIRCRM*TSCGTV
Trigger: CACCGTCCCGCAGCTGGTCCACATTCTGCACCTGAT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATCTGAATCCGGCTGCTaGTCCTTGATCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSESGC*SLILCS
Trigger: GCTGCAGAGGATCAAGGACCAGCAGCCGGATTCAGA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAGGATGGCTGGGGACTaGAGGACAGTTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKRMAGD*RTVSRK
Trigger: CTTCCTGCTAACTGTCCTCCAGTCCCCAGCCATCCT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACGCGAGAGAAGGCTGTaGACGGCTCGCAACACCTTG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKRERRL*TARNTL
Trigger: CAAGGTGTTGCGAGCCGTCCACAGCCTTCTCTCGCG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGCCCTGATGAGTGGCTaGGCACAGCGCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKALMSG*AQRSPE
Trigger: CTCTGGGCTGCGCTGTGCCCAGCCACTCATCAGGGC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCTTTGCCCTGATGAGTaGCTGGGCACAGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSLCPDE*LGTAQP
Trigger: GGGCTGCGCTGTGCCCAGCCACTCATCAGGGCAAAG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTGGCTCCTTGGCAGCTaGTGCCAATGGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASWLLGS*CQWGCS
Trigger: AGAGCACCCCCATTGGCACCAGCTGCCAAGGAGCCA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATGGTTTTGGGCGTGCTaGTCTGATCCCCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKWFWAC*SDPQEL
Trigger: TAGCTCCTGGGGATCAGACCAGCACGCCCAAAACCA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTCTCTGCCAGCGTCGTaGAAATGTGGCACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSLPAS*KCGTAE
Trigger: TTCAGCTGTGCCACATTTCCACGACGCTGGCAGAGA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAATCTGGGGAAAAGCTaGACCCACGTCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTNLGKS*THVFSA
Trigger: GGCAGAGAAGACGTGGGTCCAGCTTTTCCCCAGATT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGCCGCTGCACAGAAATaGACTTATCTCACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKAAAQK*TYLTRE
Trigger: CTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTTCAGCGCGCTGGGCTaGCAGTCCCGCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPFSALG*QSRCTW
Trigger: CCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGGGTCGGATGGGGATTaGCGGCACGCACTGGGACAT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSGSDGD*RHALGH
Trigger: ATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCCGCCACTCGCGGATaGCCAGGCTGCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLAATRG*PGCWPS
Trigger: AGATGGCCAGCAGCCTGGCCATCCGCGAGTGGCGGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTACGTGGGACACTACGTaGGGCAGCCGCCGCCACTCG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSTWDTT*GSRRHS
Trigger: CGAGTGGCGGCGGCTGCCCCACGTAGTGTCCCACGT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGCGATTTTTCCATACTaGATGATCGCTGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPAIFPY*MIAEAD
Trigger: ATCAGCTTCAGCGATCATCCAGTATGGAAAAATCGC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGGTAGTCGCCCCACATaGCCCAGGCTTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKGSRPT*PRLSPA
Trigger: TGCTGGTGAAAGCCTGGGCCATGTGGGGCGACTACC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTCGCGGAGGACCTGGTaGCTGGCTTGGGTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWSRRTW*LAWVPR
Trigger: GCGGGGAACCCAAGCCAGCCACCAGGTCCTCCGCGA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCGCGGAGGACCTGGTaGCTGGCTTGGGTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTISRRTW*LAWVPR
Trigger: GCGGGGAACCCAAGCCAGCCACCAGGTCCTCCGCGA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAACGTCCAGTAGTCCGTaGCATTGGGGAAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKTSSSP*HWGRCA
Trigger: TGCACACCTTCCCCAATGCCACGGACTACTGGACGT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGGGCGACCGCAATCATaGACGCTGTCAACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGGRPQS*TLSTGR
Trigger: CCGGCCCGTTGACAGCGTCCATGATTGCGGTCGCCC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTAGGGACACCAGTTGCTaGCTGTCCATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLRDTSC*LSMFSG
Trigger: GCCAGAGAACATGGACAGCCAGCAACTGGTGTCCCT...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCCCCGCCTTCGAACTaGGCGAGGTTGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGSPPSN*ARLCRR
Trigger: CCGCCTGCACAACCTCGCCCAGTTCGAAGGCGGGGA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATCCCCGCCTTCGAACTaGGCGAGGTTGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSPPSN*ARLCRR
Trigger: CCGCCTGCACAACCTCGCCCAGTTCGAAGGCGGGGA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGTGGCCTGGCCCCGTaGATCCACGCCGAACGCTCA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWGGLAP*IHAERS
Trigger: TGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCCCGCAGGGTGGCCTaGCCCCGTGGATCCACGCCG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSRRVA*PRGSTP
Trigger: CGGCGTGGATCCACGGGGCCAGGCCACCCTGCGGGA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCGAAGTGGATGCGTGTaGCGCTCCCGCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPRSGCV*RSRRVA
Trigger: GGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCGAAGTGGATGCGTGTaGCGCTCCCGCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRSGCV*RSRRVA
Trigger: GGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GGAAACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTAGACACCAGGCTTCATaGAGCGCAAGACGACTCACA +
Preference number: 4 (lower is better)
Translates to: GNMPYRPQPHLTLAEFSSRHQAS*SARRLT
Trigger: TGTGAGTCGTCTTGCGCTCCATGAAGCCTGGTGTCT...AGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 72 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTaGCAAAGCACGGCTCCCATCATTCCAGAACCCAAG +
Preference number: 4 (lower is better)
Translates to: HQLPDEHAITPH*QSTAPIIPEPK
Trigger: CTTGGGTTCTGGAATGATGGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCCACAGAGCCTGCATaGGCTCTGCGCGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQATEPA*ALRAPA
Trigger: AGCCGGTGCGCGCAGAGCTCATGCAGGCTCTGTGGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCGGAAAACTCCACAGTaGTGCTGGGGCCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASRKTPQ*CWGPEP
Trigger: AGGTTCAGGGCCCCAGCATCACTGTGGAGTTTTCCG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCCAGGCGAAGGTCATaGGGCGGCGCAGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPARRRS*GGAACC
Trigger: ACAGCAAGCTGCGCCGCCTCATGACCTTCGCCTGGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGCCAGGCGAAGGTCATaGGGCGGCGCAGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYARRRS*GGAACC
Trigger: ACAGCAAGCTGCGCCGCCTCATGACCTTCGCCTGGC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCCAGGCGAAGGTCATaGGGCGGCGCAGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLARRRS*GGAACC
Trigger: ACAGCAAGCTGCGCCGCCTCATGACCTTCGCCTGGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGCCCCTCCTCCACAATaGTCTTCCGGGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGAPPPQ*SSGSSG
Trigger: CCCACTGGACCCGGAAGATCATTGTGGAGGAGGGGC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCCGGCTGCTGGTCCTTaGTCCTCTGCAGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGPAAGP*SSAAPT
Trigger: AGTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACGAACCACTGCAGCTTaGGTTCGGACTTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKRTTAA*VRTWAT
Trigger: TGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCTCAATGCACTGCTTaGTCCAGAAGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRAQCTA*SRSGSP
Trigger: TGGGGAACCACTTCTGGATCAAGCAGTGCATTGAGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCTGAACGAAAGCGCTaGGCAGCGCTCCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGAERKR*AALQSS
Trigger: TGAAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTCCCGCTGCACCTGGTaGCTGCCGCTGCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSSRCTW*LPLHRN
Trigger: ATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCCTGCTGCGGCGGGGTaGTGCTCTCCTGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGPAAAG*CSPAHK
Trigger: TTTATGAGCAGGAGAGCATCACCCCGCCGCAGCAGG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCTGAAGCTGATGCATaGACCCCAAGCATAGCGTTA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTAEADA*TPSIAL
Trigger: TAACGCTATGCTTGGGGTTCATGCATCAGCTTCAGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACCTGTTGGAGCTGCCTaGGAACCTCTTCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKPVGAA*EPLHAN
Trigger: ATTGGCATGAAGAGGTTCTCAGGCAGCTCCAACAGG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGGCACCATGTTACTCTaGACCTCCTTGAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKGTMLL*TSLRMS
Trigger: CGACATCCTCAAGGAGGTTCAGAGTAACATGGTGCC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTCAGAAATGTTGGGCGTaGGTCGAAATGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLQKCWA*VEMGQD
Trigger: GTCCTGTCCCATTTCGACTCACGCCCAACATTTCTG...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACTGGTTACCCACTaGACTTGGCTGCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGGLVTH*TWLLLS
Trigger: GGACAGCAGCAGCCAAGTTCAGTGGGTAACCAGTCC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAACCAAGAGGCTACGCTaGGGAGCCCACACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGTKRLR*GAHTVS
Trigger: AGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGGCTCCTGCAGTTTGTaGCTGGGTCCACGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGGSCSL*LGPRES
Trigger: GGACTCGCGTGGACCCAGTCACAAACTGCAGGAGCC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCGAGGTCGGCCAGCGTaGTGTAGGCGAGGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYRGRPA*CRRGAL
Trigger: TAAGGCCCCTCGCCTACAGCACGCTGGCCGACCTCG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTCGCTGAGGGGCAGGTaGTGGCGGACATGGTGCACG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSLRGR*WRTWCT
Trigger: CGTGCACCATGTCCGCCAGCACCTGCCCCTCAGCGA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGGACGTCTCTCCCATTaGCACTCTCCTGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASGRLSH*HSPARS
Trigger: AGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAGCCTGCATGAGCTCTaGGCGCACCGGCTGGATGTG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSLHEL*AHRLDV
Trigger: CACATCCAGCCGGTGCGCGCAGAGCTCATGCAGGCT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCTGGAGAGAAGCTTTaGAGTCGGAAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTAGEKL*SRKTPQ
Trigger: CTGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCTCCAGCGTGGTCTTTaGCATAGCGACTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLQRGL*HSDCPI
Trigger: AATGGGGCAGTCGCTATGGCAAAGACCACGCTGGAG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAACACCTGCAGCGAATaGATGGCCTGCTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKNTCSE*MACFLT
Trigger: TGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGCGCATGGTGCTGGTaGTGGGCGAACCGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGAWCW*WANRGA
Trigger: TGCGCCCCGGTTCGCCCAGCACCAGCACCATGCGCC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGCGCATGGTGCTGGTaGTGGGCGAACCGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGAWCW*WANRGA
Trigger: TGCGCCCCGGTTCGCCCAGCACCAGCACCATGCGCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGGTCCAGGCGCATGGTaGTGGTGCTGGGCGAACCGG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLGPGAW*WCWANR
Trigger: CCGGTTCGCCCAGCACCAGCACCATGCGCCTGGACC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAGAATGTGGACCAGCTaGGGGACGGTGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKRMWTS*GTVCPS
Trigger: GGAGGGGCACACCGTCCCGCAGCTGGTCCACATTCT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGATGGCGCTCACCATGTaGTGCACCAAGTGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASMALTM*CTKWCR
Trigger: ACGGCACCACTTGGTGCAGCACATGGTGAGCGCCAT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACAGTGTCTGTGTGCTaGTTGTCAATGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRTVSVC*LSMGLA
Trigger: CGCCAAGCCCATTGACAAGCAGCACACAGACACTGT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGACCTTTCCGACGGCTaGGTAGAGGCACTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGDLSDG*VEALQL
Trigger: GAGCTGGAGTGCCTCTACGCAGCCGTCGGAAAGGTC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCGCTCCCGGGGCTCCTaGTTGACATGTGTGACCATG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRSRGS*LTCVTM
Trigger: CATGGTCACACATGTCAAGCAGGAGCCCCGGGAGCG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCCCGCGAGTGCATGCTaGTGTCTGTCAGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASPASAC*CLSERI
Trigger: GATCCTCTCTGACAGACAGCAGCATGCACTCGCGGG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACCCGCGAGTGCATGCTaGTGTCTGTCAGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGPASAC*CLSERI
Trigger: GATCCTCTCTGACAGACAGCAGCATGCACTCGCGGG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCTGCACCTGGTGACTaGCGCTGCACAGAAATGGAC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGAAPGD*RCTEMD
Trigger: GTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATACTTGCACCGCTTCTaGCACAGACCAGCCCACATA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKYLHRF*HRPAHI
Trigger: TATGTGGGCTGGTCTGTGGCAGAAGCGGTGCAAGTA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATGTAGGAGAGGCGTGTaGACGTGGGACACTACGTGG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGCRRGV*TWDTTW
Trigger: CCACGTAGTGTCCCACGTGCACACGCCTCTCCTACA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTGTAGGAGAGGCGTGTaGACGTGGGACACTACGTGG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASCRRGV*TWDTTW
Trigger: CCACGTAGTGTCCCACGTGCACACGCCTCTCCTACA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AGGCTTTGCAAGGTGACTGACGTGGAGGCAGGGCTATTCGATGACGCGTCTATGGCCTGCGTTGATTTGTaGAGCTTCCTGGAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: RLCKVTDVEAGLFDDASMACVDL*SFLEFD
Trigger: ATCGAACTCCAGGAAGCTGCACAAATCAACGCAGGC...CATAGACGCGTCATCGAATAGCCCTGCCTCCACGTCAGTCACCTTGCAAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAGCACATCGTGCATCTaGACAGCTGCAGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSTSCI*TAAEKA
Trigger: AGCCTTCTCTGCAGCTGTGCAGATGCACGATGTGCT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTTCACCAGCACATCGTaGATCTGCACAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRFTSTS*ICTAAE
Trigger: CTCTGCAGCTGTGCAGATGCACGATGTGCTGGTGAA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGGGTGGAGCTCTCGCTaGATGTGCATGATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKGWSSR*MCMIRL
Trigger: CAGCCGAATCATGCACATGCAGCGAGAGCTCCACCC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCCATCTGATCGACGATaGCTTCCAGGGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTPSDRR*LPGKTE
Trigger: TTCTGTCTTCCCTGGAAGGCATCGTCGATCAGATGG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGTACAGCCGCCGGGCTaGGGTGTTGTGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGVQPPG*GVVLLH
Trigger: GTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTAC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCAGCAGACGCAGCAGCTaGAACACACGCTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSSRRSS*NTRSSR
Trigger: GCGAGAGGAGCGTGTGTTGCAGCTGCTGCGTCTGCT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTTGTCATGCTCGATaGCCTTCTTGGCGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGGCHAR*PSWRSA
Trigger: AGCGCTGCGCCAAGAAGGGCATCGAGCATGACAACC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAATTGTCCAGGCTGTTTaGCGCGGCCACCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGIVQAV*RGHQGV
Trigger: AACACCCTGGTGGCCGCGGCAAACAGCCTGGACAAT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCCAGGCGGGGTCCATaGGGCACAGATTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPARRGP*GTDCPG
Trigger: GCCTGGACAATCTGTGCCGCATGGACCCCGCCTGGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGCCAGGCGGGGTCCATaGGGCACAGATTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWARRGP*GTDCPG
Trigger: GCCTGGACAATCTGTGCCGCATGGACCCCGCCTGGC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCAGAGAACAAAGACAGCTCTCTaGAAGGAACTGGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: KESQGLEKVLWPAAEVQRTKTAL*KELGSN
Trigger: GTTACTTCCCAGTTCCTTGCAGAGAGCTGTCTTTGT...TCTCTGGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGCGATCATGGCTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGAIMAH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGCCATGATCGC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTCATCAAAGTGGTCTaGTCAACCACCGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCFIKVV*STTVAP
Trigger: GGGGGCCACGGTGGTTGACCAGACCACTTTGATGAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCTGAGGGGCAGGTGCTaGCGGACATGGTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYLRGRC*RTWCTR
Trigger: CCTCGTGCACCATGTCCGCCAGCACCTGCCCCTCAG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATTGCAGGACATGGTCTaGATGCTGCTGGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKLQDMV*MLLGRD
Trigger: GTCCCTGCCCAGCAGCATCCAGACCATGTCCTGCAA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACCCTTGCAGGAGGTTTaGAAGGAGAGGCAAGAACTC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKPLQEV*KERQEL
Trigger: GAGTTCTTGCCTCTCCTTCCAAACCTCCTGCAAGGG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTCTCCATGGGGAGCTaGAGAGAAGCTTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKFSMGS*REALQS
Trigger: CGACTGCAAAGCTTCTCTCCAGCTCCCCATGGAGAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAGTAGGGCTCAGTGTTaGCGCTTTTCAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSRAQC*RFSGSP
Trigger: TGGACTGCCTGAAAAGCGCCAACACTGAGCCCTACT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAAAGGGCCACACTGCTaGGCGACTGCCACCATCGTA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGKGPHC*ATATIV
Trigger: TACGATGGTGGCAGTCGCCCAGCAGTGTGGCCCTTT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATGGAAAGACTTTTCCTaGGCGGCCACGATCTCTTCG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKWKDFS*AATISS
Trigger: CGAAGAGATCGTGGCCGCCCAGGAAAAGTCTTTCCA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTCGTGTGTCACATGGTaGAAAGACTTTTCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSCVTW*KDFSWA
Trigger: CGCCCAGGAAAAGTCTTTCCACCATGTGACACACGA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGGCCAATCTGTGCGTTaGCAGGCTGGTGTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSGQSVR*QAGVGA
Trigger: TGCTCCGACACCAGCCTGCCAACGCACAGATTGGCC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGCCTGGGCTGCAACGTaGTACAGAACGTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKAWAAT*YRTCSP
Trigger: AGGGGAACACGTTCTGTACCACGTTGCAGCCCAGGC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCATGGTGCTGGTGCTaGGCGAACCGGGGCGCACAG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAWCWC*ANRGAQ
Trigger: CTGTGCGCCCCGGTTCGCCCAGCACCAGCACCATGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATTGATGGCCTGGAACTaGAGGTCCAGGCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKLMAWN*RSRRMV
Trigger: CACCATGCGCCTGGACCTCCAGTTCCAGGCCATCAA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCTCACCAGAGAGTGCTaGCTGGCCAGCCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLTREC*LASQES
Trigger: TGACTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACACACACGTCGCAACTaGCTCACCAGAGAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKHTRRN*LTRECW
Trigger: CCAGCACTCTCTGGTGAGCCAGTTGCGACGTGTGTG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGATCTTCCGGGTCCAGTaGGTCAGCATCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGIFRVQ*VSIWCP
Trigger: CGGGCACCAGATGCTGACCCACTGGACCCGGAAGAT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGATCAGGTGCAGAATGTaGACCAGCTGCGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASIRCRM*TSCGTV
Trigger: CACCGTCCCGCAGCTGGTCCACATTCTGCACCTGAT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACTTGGGCCACATGTCTaGCCGCAACGCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGLGPHV*PQRSLQ
Trigger: CTGAAGACTGCGTTGCGGCCAGACATGTGGCCCAAG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCGCGAGAGAAGGCTGTaGACGGCTCGCAACACCTTG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRERRL*TARNTL
Trigger: CAAGGTGTTGCGAGCCGTCCACAGCCTTCTCTCGCG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTTTGCCCTGATGAGTaGCTGGGCACAGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLCPDE*LGTAQP
Trigger: GGGCTGCGCTGTGCCCAGCCACTCATCAGGGCAAAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCAGCTGGTGCCAATaGGGGTGCTCTTCTCACACA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGGSWCQ*GCSSHT
Trigger: TGTGTGAGAAGAGCACCCCCATTGGCACCAGCTGCC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGGCTCCTTGGCAGCTaGTGCCAATGGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSWLLGS*CQWGCS
Trigger: AGAGCACCCCCATTGGCACCAGCTGCCAAGGAGCCA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTCAGCGCGCTGGGCTaGCAGTCCCGCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLFSALG*QSRCTW
Trigger: CCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGCAGTTCAGCGCGCTaGGCTGGCAGTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSSSAR*AGSPAA
Trigger: TGCAGCGGGACTGCCAGCCCAGCGCGCTGAACTGCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCACGCACTGGGACATaGCTTCCACAAAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRARTGT*LPQSSS
Trigger: TGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGGGTCGGATGGGGATTaGCGGCACGCACTGGGACAT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGGSDGD*RHALGH
Trigger: ATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGGACGCAGGGTCGGATaGGGATTGGCGGCACGCACT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSGRRVG*GLAART
Trigger: AGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCCAACATCAGCGTaGACCGGAACCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCAPTSA*TGTRGC
Trigger: ACAACCTCTGGTTCCGGTCCACGCTGATGTTGGAGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGTCAGGGCTTCCCACTaGTTCAATTCCTTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTVRASH*FNSLEH
Trigger: ATGCTCCAAGGAATTGAACCAGTGGGAAGCCCTGAC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCATGGCAGTCCAGTTaGACACCCGCCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSWQSS*TPARRT
Trigger: AGTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCCGCCACTCGCGGATaGCCAGGCTGCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLAATRG*PGCWPS
Trigger: AGATGGCCAGCAGCCTGGCCATCCGCGAGTGGCGGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAGTTCGATGATTTGCTaGGCTGCCTGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSSMIC*AACRRG
Trigger: GCCTCTCCTACAGGCAGCCCAGCAAATCATCGAACT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCGCGATTTTTCCATACTaGATGATCGCTGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSAIFPY*MIAEAD
Trigger: ATCAGCTTCAGCGATCATCCAGTATGGAAAAATCGC...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGGTAGTCGCCCCACATaGCCCAGGCTTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSGSRPT*PRLSPA
Trigger: TGCTGGTGAAAGCCTGGGCCATGTGGGGCGACTACC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTTCGCCAGGCCCTGTTaGAGCTGCCTGAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASFARPC*SCLRTS
Trigger: AGAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCACGAGGCGCATCTGTaGGGAAACTGCCACAACCCG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGHEAHL*GNCHNP
Trigger: CGGGTTGTGGCAGTTTCCCCACAGATGCGCCTCGTG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGCTCGATGCCCTTCTTaGCGCAGCGCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKARCPS*RSAACR
Trigger: TCTACAAGCAGCGCTGCGCCAAGAAGGGCATCGAGC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGGAGGACCTGGTGGCTaGCTTGGGTTCCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSGGPGG*LGFPAP
Trigger: AGGCGCGGGGAACCCAAGCCAGCCACCAGGTCCTCC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATCGCGGAGGACCTGGTaGCTGGCTTGGGTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSRRTW*LAWVPR
Trigger: GCGGGGAACCCAAGCCAGCCACCAGGTCCTCCGCGA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCATGTCGCGGAGGACCTaGTGGCTGGCTTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGMSRRT*WLAWVP
Trigger: GGGAACCCAAGCCAGCCACCAGGTCCTCCGCGACAT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGGGCGACCGCAATCATaGACGCTGTCAACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSGRPQS*TLSTGR
Trigger: CCGGCCCGTTGACAGCGTCCATGATTGCGGTCGCCC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGACCTTAAAGTTTGGCTaGGCGAAGCACCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASTLKFG*AKHRAT
Trigger: GGTCGCCCGGTGCTTCGCCCAGCCAAACTTTAAGGT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTATCCACCTTAAAGTTTaGCTGGGCGAAGCACCGGGC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCIHLKV*LGEAPG
Trigger: GCCCGGTGCTTCGCCCAGCCAAACTTTAAGGTGGAT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCTGTCCATGTTCTCTaGCTGCCCGGCGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLAVHVL*LPGGRE
Trigger: CTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTCCCCGCCTTCGAACTaGGCGAGGTTGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSPPSN*ARLCRR
Trigger: CCGCCTGCACAACCTCGCCCAGTTCGAAGGCGGGGA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTCCCCGCCTTCGAACTaGGCGAGGTTGTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSPPSN*ARLCRR
Trigger: CCGCCTGCACAACCTCGCCCAGTTCGAAGGCGGGGA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCATTCCGGGTGGCCGTaGCGGCCACAGTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYHSGWP*RPQSQP
Trigger: TGGCTGTGACTGTGGCCGCCACGGCCACCCGGAATG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCTTCACATTCCGGGTaGCCGTGGCGGCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPSHSG*PWRPQS
Trigger: TGACTGTGGCCGCCACGGCCACCCGGAATGTGAAGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGGTGGCCTGGCCCCGTaGATCCACGCCGAACGCTCA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYGGLAP*IHAERS
Trigger: TGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGATGCAGAATGGGACTaGTTACCCACTGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTDAEWD*LPTELG
Trigger: GCCAAGTTCAGTGGGTAACCAGTCCCATTCTGCATC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTGCGGGTTTGCTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTGCATGCGCGGTCCTTGGGGTTaGAGACCCGTTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PAGLLEMVFGEKGHIVCMRGPWG*RPVWRR
Trigger: CCTCCTCCAAACGGGTCTCCAACCCCAAGGACCGCG...CATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGCAAACCCGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 72 bp CCTCAGCTGATCATAGGCGGCCTGGATAAAATAGACTaGAACGACTGGAAGTCGAACACGCGGCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PQLIIGGLDKID*NDWKSNTRLKH
Trigger: GTGCTTCAGCCGCGTGTTCGACTTCCAGTCGTTCAAGTCTATTTTATCCAGGCCGCCTATGATCAGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCACTTTCAGAGAAAGTaGTCCCCTCGGAATGATGGA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTHFQRK*SPRNDG
Trigger: TCCATCATTCCGAGGGGATCACTTTCTCTGAAAGTG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTGTCCATGCAAGGAATaGACTGGTTTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTCPCKE*TGFSAL
Trigger: CAGAGCTGAGAAACCAGTTCATTCCTTGCATGGACA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAGAGGCAAGAACTCCTaGTACAAGAGATCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTRGKNS*YKRSWL
Trigger: TAGCCACGATCTCTTGTATCAGGAGTTCTTGCCTCT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCCACCAGGAAGCATTTaGTCACTTCCCACGCCTGCC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSPPGSI*SLPTPA
Trigger: GGCAGGCGTGGGAAGTGATCAAATGCTTCCTGGTGG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTGGAGTTTGGAGAGGTaGCTTCTCGAACCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRWSLER*LLEPSR
Trigger: ACGACTTGGTTCGAGAAGTCACCTCTCCAAACTCCA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATTGGGAAGAGCCTCGTaGCCGAAGTCAGGCGATTCA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGLGRAS*PKSGDS
Trigger: TGAATCGCCTGACTTCGGTCACGAGGCTCTTCCCAA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACCGGGTAGTACACCTTaGAGTGTTGCACTATCAGGT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKPGSTP*SVALSG
Trigger: ACCTGATAGTGCAACACTTCAAGGTGTACTACCCGG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAATTTGGGTCCATATCTaGATCCGGCTGCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKIWVHI*IRLLVL
Trigger: AAGGACCAGCAGCCGGATTCAGATATGGACCCAAAT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATCCCAAAGACTGCACTaGTGGCTCCGGTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLSQRLH*WLRWPS
Trigger: GGACGGCCACCGGAGCCATCAGTGCAGTCTTTGGGA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCGAACCACTGCAGCTTaGGTTCGGACTTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRTTAA*VRTWAT
Trigger: TGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGAAATGTGGCACAGCTaGACGAAAGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGEMWHS*TKALSS
Trigger: GCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCCCGCTGCACCTGGTaGCTGCCGCTGCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGSRCTW*LPLHRN
Trigger: ATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTGTAAGCCTGCGTTaGTTTGTGCAGCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCAVSLR*FVQLPG
Trigger: TCCAGGAAGCTGCACAAATCAACGCAGGCTTACAGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCCTCCTCGGACTTGTTaGTCTGAGCCAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRPPRTC*SEPRTF
Trigger: GAATGTTCTTGGCTCAGATCAACAAGTCCGAGGAGG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCGTGCAGGTAGCAGGTaGTGGCAGACACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYRAGSR*WQTRPG
Trigger: ACCTGGGCGTGTCTGCCATCACCTGCTACCTGCACG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACGTGCAGGTAGCAGGTaGTGGCAGACACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLRAGSR*WQTRPG
Trigger: ACCTGGGCGTGTCTGCCATCACCTGCTACCTGCACG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGATTTGCTCTCGTTCTaGTGCCGGCAGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKDLLSF*CRQACR
Trigger: CCTGCACGCCTGCCGGCATCAGAACGAGAGCAAATC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGATTTGCTCTCGTTCTaGTGCCGGCAGGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGDLLSF*CRQACR
Trigger: CCTGCACGCCTGCCGGCATCAGAACGAGAGCAAATC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCTGAACCAGACCATCTaGTCGACGATGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASLNQTI*STMPSR
Trigger: CCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKITATQ*NYGASV
Trigger: CACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTAT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAGCACGAAGCTGCTGTaGGGTGTTATTTCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSTKLL*GVISER
Trigger: TCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCATGTTGCCTCGCTTGTaGAGACACCTGAATGGCAAT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTMLPRL*RHLNGN
Trigger: ATTGCCATTCAGGTGTCTGCACAAGCGAGGCAACAT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCGCTCTTGGAACGGATaGAGTCCACCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASRSWNG*SPPGSA
Trigger: TGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGGACGTCTCTCCCATTaGCACTCTCCTGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSGRLSH*HSPARS
Trigger: AGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTGTCCTTTTCTCCTTaGTTCTCGAAGGGAGGCACG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLSFSP*FSKGGT
Trigger: CGTGCCTCCCTTCGAGAAGCAAGGAGAAAAGGACAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAACACACCAGCGAAATaGTCCAATACCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTNTPAK*SNTSFS
Trigger: GGAGAAGGAGGTATTGGAGCATTTCGCTGGTGTGTT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCATCTTCCTGTTACTaGCGCCAAACTTACCGAGCA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRASSCY*RQTYRA
Trigger: TGCTCGGTAAGTTTGGCGGCAGTAACAGGAAGATGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCTGGAGAGAAGCTTTaGAGTCGGAAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRAGEKL*SRKTPQ
Trigger: CTGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGCGCCTGTCAGGGCCTaGTCAAAAGTCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGAPVRA*SKVFRA
Trigger: AGCCCGGAAGACTTTTGAGCAGGCCCTGACAGGCGC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCTGTGCTGGGCTGGCTaGCCACCTGGTAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLCWAG*PPGSKA
Trigger: TGCCTTGCTACCAGGTGGGCAGCCAGCCCAGCACAG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCTGTGCTGGGCTGGCTaGCCACCTGGTAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYLCWAG*PPGSKA
Trigger: TGCCTTGCTACCAGGTGGGCAGCCAGCCCAGCACAG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGTGAAGAGCCTGGGCTaGAACGTGGTACAGAACGTG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASVKSLG*NVVQNV
Trigger: CACGTTCTGTACCACGTTGCAGCCCAGGCTCTTCAC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCCACTTCCATCCACTTaGGCAGATGTTGCATCATCT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTPLPST*ADVASS
Trigger: AGATGATGCAACATCTGCGCAAGTGGATGGAAGTGG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGTCCAGGCGCATGGTaGTGGTGCTGGGCGAACCGG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGPGAW*WCWANR
Trigger: CCGGTTCGCCCAGCACCAGCACCATGCGCCTGGACC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTGGCTCACCAGAGAGTaGTGGCTGGCCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPWLTRE*WLASQE
Trigger: CTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCATGTTCTCCTTGCGGTaGCTCTCTTGGAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTMFSLR*LSWKFS
Trigger: TGAGAACTTCCAAGAGAGGCACCGCAAGGAGAACAT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTTCCAGTTGGTGGCTaGCATGTTCTCCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKLPVGG*HVLLAV
Trigger: CACCGCAAGGAGAACATGGCAGCCACCAACTGGAAG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACTTCCAGTTGGTGGCTaGCATGTTCTCCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGLPVGG*HVLLAV
Trigger: CACCGCAAGGAGAACATGGCAGCCACCAACTGGAAG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGCAGGATTCAAGATATaGTGCAGAACTTTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPAGFKI*CRTLAF
Trigger: AAAAGCTAAAGTTCTGCAGCATATCTTGAATCCTGC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAGTGTCCGCTGTACTTaGAGGCTGGGTCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSVRCT*RLGPRR
Trigger: CCTGCGTGGACCCAGCCTGCAAGTACAGCGGACACT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGGGTCAGCATCTGGTaGCCGTCCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIWVSIW*PSSILA
Trigger: GGCCAGGATGGAGGACGGGCACCAGATGCTGACCCA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGCGCTCACCATGTGCTaGACCAAGTGGTGCCGTACC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGALTMC*TKWCRT
Trigger: GGTACGGCACCACTTGGTGCAGCACATGGTGAGCGC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTGGTCCTTGATCCTCTaGAGCTCCCACTTGATGACG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCWSLIL*SSHLMT
Trigger: CGTCATCAAGTGGGAGCTGCAGAGGATCAAGGACCA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATGTTTCCACATGTCATaGAGGCGGCAATTCCACGCT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKCFHMS*RRQFHA
Trigger: AGCGTGGAATTGCCGCCTGCATGACATGTGGAAACA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTCGCCGTCAGCTCGCTaGCAGAGAGGGTCTCATCCC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYSPSAR*QRGSHP
Trigger: GGGATGAGACCCTCTCTGGCAGCGAGCTGACGGCGA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCTCCTTGGCAGCTGGTaGCAATGGGGGTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSLLGSW*QWGCSS
Trigger: AGAAGAGCACCCCCATTGGCACCAGCTGCCAAGGAG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTCCAGAAACTTGTCGTaGCTGTTGGTTAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSRNLS*LLVSMC
Trigger: GCACATGCTAACCAACAGGCACGACAAGTTTCTGGA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTATCTCACCCGCGAGTaGATGCTGCTGTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCYLTRE*MLLSVR
Trigger: TCTGACAGACAGCAGCATGCACTCGCGGGTGAGATA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCAGCTCACTTCCACCTaGACCAGCGCCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSQLTST*TSASFM
Trigger: CATGAAGGAGGCGCTGGTGCAGGTGGAAGTGAGCTG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCGATGAAGCTGAGCTaGTGCTCCTCGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGSMKLS*CSSGWQ
Trigger: CTGCCACCCCGAGGAGCAGCAGCTCAGCTTCATCGA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCCTGCGTTGATTTGTaGAGCTTCCTGGAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRACVDL*SFLEFD
Trigger: ATCGAACTCCAGGAAGCTGCACAAATCAACGCAGGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTACCGTCTTCATGTCGTaGAGGCTGTTGTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCTVFMS*RLLFLP
Trigger: GGGAAGGAACAACAGCCTGCACGACATGAAGACGGT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTAGCACATCGTGCATCTaGACAGCTGCAGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSTSCI*TAAEKA
Trigger: AGCCTTCTCTGCAGCTGTGCAGATGCACGATGTGCT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTCACCAGCACATCGTaGATCTGCACAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCFTSTS*ICTAAE
Trigger: CTCTGCAGCTGTGCAGATGCACGATGTGCTGGTGAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAGTATTTCCTCGATTTaGTCTCGTTCTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSISSI*SRSDAG
Trigger: GCCGGCATCAGAACGAGAGCAAATCGAGGAAATACT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCCATCTGATCGACGATaGCTTCCAGGGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRPSDRR*LPGKTE
Trigger: TTCTGTCTTCCCTGGAAGGCATCGTCGATCAGATGG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAGGCCCTGTTGGAGCTaGCTGAGAACCTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKRPCWS*LRTSSC
Trigger: GCATGAAGAGGTTCTCAGGCAGCTCCAACAGGGCCT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAAAGACAGGGTCTTGTaGAGTGGCCTGCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLKDRVL*SGLRPP
Trigger: CGGCGGGCGCAGGCCACTGCACAAGACCCTGTCTTT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAAAGACAGGGTCTTGTaGAGTGGCCTGCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIKDRVL*SGLRPP
Trigger: CGGCGGGCGCAGGCCACTGCACAAGACCCTGTCTTT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAAAGACAGGGTCTTGTaGAGTGGCCTGCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSKDRVL*SGLRPP
Trigger: CGGCGGGCGCAGGCCACTGCACAAGACCCTGTCTTT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAAGAATTTGGGGAGTTaGTTGGTCTTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTKNLGS*LVLASK
Trigger: CTTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCCCGGGGCATGAACCGTaGAATCTTGATGTAATAATG +
Preference number: 4 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPPGHEP*NLDVIM
Trigger: CATTATTACATCAAGATTGCACGGTTCATGCCCCGG...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGCGGTGTTGTGCTTCTaGACAATCTCTACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSAVLCF*TISTRG
Trigger: GCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACGGGCTGCGGTGTTGTaGTTCTGCACAATCTCTACC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGRAAVL*FCTIST
Trigger: GGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGTACAGCCGCCGGGCTaGGGTGTTGTGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYVQPPG*GVVLLH
Trigger: GTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTAC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGTACAGCCGCCGGGCTaGGGTGTTGTGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIVQPPG*GVVLLH
Trigger: GTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTAC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAGCAGACGCAGCAGCTaGAACACACGCTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSRRSS*NTRSSR
Trigger: GCGAGAGGAGCGTGTGTTGCAGCTGCTGCGTCTGCT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCATCTGTGGGGAAACTaGCACAACCCGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGHLWGN*HNPGHC
Trigger: ACAGTGCCCCGGGTTGTGGCAGTTTCCCCACAGATG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGGGTTCCCCGCGCCTaGACCGTAGCCAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFWVPRA*TVASRS
Trigger: TGACCGGCTGGCTACGGTGCAGGCGCGGGGAACCCA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTCCATGTTCTCTGGCTaGCCGGCGGCCGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSMFSG*PAAERG
Trigger: TCCTCTCTCGGCCGCCGGGCAGCCAGAGAACATGGA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTACCAGGGACACCAGTTaGTGGCTGTCCATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCTRDTS*WLSMFS
Trigger: AGAGAACATGGACAGCCAGCAACTGGTGTCCCTGGT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAACTGGGCGAGGTTGTaGAGGCGGGTCATGATGGCG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGNWARL*RRVMMA
Trigger: CGCCATCATGACCCGCCTGCACAACCTCGCCCAGTT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACTGGGCGAGGTTGTaGAGGCGGGTCATGATGGCG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKNWARL*RRVMMA
Trigger: CGCCATCATGACCCGCCTGCACAACCTCGCCCAGTT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACCAGGGTGTTCACCTTaGTTTCCCCGCCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGPGCSP*FPRLRT
Trigger: AGTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTCCAGCTCCCAGCAATaGTGTGCCGGGTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSSSQQ*CAGWTE
Trigger: CTCTGTCCACCCGGCACAGCATTGCTGGGAGCTGGA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCCGACAGCAACATCGTaGGGTGGTTCTGGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGPTATS*GGSGKR
Trigger: CCGCTTGCCAGAACCACCGCACGATGTTGCTGTCGG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTCCCATCAACAGCTGTaGACCGCGGTCCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSSHQQL*TAVLGV
Trigger: AACCCCAAGGACCGCGGTGCACAGCTGTTGATGGGA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCTGAGCCAATTAGTATaGATTCATCAAACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GRSRKSCGLRARSALHIPLSQLV*IHQTAC
Trigger: ACAAGCTGTTTGATGAATCCATACTAATTGGCTCAG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTGCAGGACATGGTCTaGATGCTGCTGGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLQDMV*MLLGRD
Trigger: GTCCCTGCCCAGCAGCATCCAGACCATGTCCTGCAA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTCTCCTGCTCGCTCTTaGAACGGATGCAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASSPARS*NGCSPP
Trigger: TGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCGACAGTCTGTGACTTaGAATGTCTGCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTRQSVT*NVCLSS
Trigger: GGAAGACAAGCAGACATTCCAAGTCACAGACTGTCG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGTTGGAGCCCATTTCTaGCAGGCGATCAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKVGAHF*QAIKEI
Trigger: TATCTCCTTGATCGCCTGCCAGAAATGGGCTCCAAC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGGAGAGCTCCACGTTaGAGCCCATTTCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSWRAPR*SPFLAG
Trigger: GCCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGGAGAGCTCCACGTTaGAGCCCATTTCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGWRAPR*SPFLAG
Trigger: GCCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAGTTGTAGGGTTCCTTaGCAGTCTGCGCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASSCRVP*QSARAP
Trigger: TGGAGCTCGCGCAGACTGCCAAGGAACCCTACAACT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAGTTGTAGGGTTCCTTaGCAGTCTGCGCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSCRVP*QSARAP
Trigger: TGGAGCTCGCGCAGACTGCCAAGGAACCCTACAACT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCCCTTGCAGGAGGTTTaGAAGGAGAGGCAAGAACTC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCPLQEV*KERQEL
Trigger: GAGTTCTTGCCTCTCCTTCCAAACCTCCTGCAAGGG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTCTCCATGGGGAGCTaGAGAGAAGCTTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCFSMGS*REALQS
Trigger: CGACTGCAAAGCTTCTCTCCAGCTCCCCATGGAGAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAAAAGTCTTCCGGGCTaGAGTGTCCTGGGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRKSLPG*SVLGFV
Trigger: TACAAAGCCCAGGACACTCCAGCCCGGAAGACTTTT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGCATGGTGCTGGTGCTaGGCGAACCGGGGCGCACAG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFAWCWC*ANRGAQ
Trigger: CTGTGCGCCCCGGTTCGCCCAGCACCAGCACCATGC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCTCACCAGAGAGTGCTaGCTGGCCAGCCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLTREC*LASQES
Trigger: TGACTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCTCCTTCCAGTTGGTaGCTGCCATGTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGAPSSW*LPCSPC
Trigger: GCAAGGAGAACATGGCAGCCACCAACTGGAAGGAGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGTCCACGCAGGCCTTaGAGAGCAGGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGPRRP*RAGRAR
Trigger: CCTGGCCCTGCCTGCTCTCCAAGGCCTGCGTGGACC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGCTGTACTTGCAGGCTaGGTCCACGCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKAVLAG*VHAGLG
Trigger: TCCAAGGCCTGCGTGGACCCAGCCTGCAAGTACAGC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCATCTTCCGGGTCCAGTaGGTCAGCATCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGIFRVQ*VSIWCP
Trigger: CGGGCACCAGATGCTGACCCACTGGACCCGGAAGAT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATCAGGTGCAGAATGTaGACCAGCTGCGGGACGGTG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSIRCRM*TSCGTV
Trigger: CACCGTCCCGCAGCTGGTCCACATTCTGCACCTGAT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAGCCCAGCCTCTGCATaGCGCTCACCATGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSPASA*RSPCAA
Trigger: TGCAGCACATGGTGAGCGCCATGCAGAGGCTGGGCT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATCTGAATCCGGCTGCTaGTCCTTGATCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSESGC*SLILCS
Trigger: GCTGCAGAGGATCAAGGACCAGCAGCCGGATTCAGA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGATTTGGAGGCCACACTaGAAGTACTCGGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRIWRPH*KYSALL
Trigger: CAACAGAGCCGAGTACTTCCAGTGTGGCCTCCAAAT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAGGGTCCCGAAGAGCTaGGAGGGATTGGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRVPKS*EGLALV
Trigger: CACCAATGCCAATCCCTCCCAGCTCTTCGGGACCCT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCCCTGATGAGTGGCTaGGCACAGCGCAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLALMSG*AQRSPE
Trigger: CTCTGGGCTGCGCTGTGCCCAGCCACTCATCAGGGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATGGCTCCTTGGCAGCTaGTGCCAATGGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKWLLGS*CQWGCS
Trigger: AGAGCACCCCCATTGGCACCAGCTGCCAAGGAGCCA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTGGCTCCTTGGCAGCTaGTGCCAATGGGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGWLLGS*CQWGCS
Trigger: AGAGCACCCCCATTGGCACCAGCTGCCAAGGAGCCA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGGGAGCATGGCTCCTTaGCAGCTGGTGCCAATGGGG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPGSMAP*QLVPMG
Trigger: CCCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGGGTCGGATGGGGATTaGCGGCACGCACTGGGACAT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPGSDGD*RHALGH
Trigger: ATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGGTCGGATGGGGATTaGCGGCACGCACTGGGACAT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWGSDGD*RHALGH
Trigger: ATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGGACGCAGGGTCGGATaGGGATTGGCGGCACGCACT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSGRRVG*GLAART
Trigger: AGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCTCCAACATCAGCGTaGACCGGAACCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGAPTSA*TGTRGC
Trigger: ACAACCTCTGGTTCCGGTCCACGCTGATGTTGGAGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CACATGTCCTTGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATGGTTCCCTTTTCAAAAGCCTaGTGCTCCAACATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: HMSLSVLERPWDVPLFMVPFSKA*CSNISV
Trigger: CACGCTGATGTTGGAGCACCAGGCTTTTGAAAAGGG...AACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGCTGCTCCTCGGGGTaGCAGATGGCCAGGTATCCG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYCCSSG*QMARYP
Trigger: CGGATACCTGGCCATCTGCCACCCCGAGGAGCAGCA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTGCTGCTCCTCGGGGTaGCAGATGGCCAGGTATCCG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPCCSSG*QMARYP
Trigger: CGGATACCTGGCCATCTGCCACCCCGAGGAGCAGCA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGGATGGCCAGGCTGCTaGCCATCTCCACCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQGWPGC*PSPPGA
Trigger: AGCGCCTGGTGGAGATGGCCAGCAGCCTGGCCATCC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAGAGGCGTGTGCACGTaGGACACTACGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYRGVCT*DTTWGS
Trigger: GCTGCCCCACGTAGTGTCCCACGTGCACACGCCTCT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGCAGGTGAGCAGCTGTaGGATCCAGGCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWAGEQL*DPGQPL
Trigger: CAGTGGCTGGCCTGGATCCCACAGCTGCTCACCTGC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGCAGGTGAGCAGCTGTaGGATCCAGGCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSAGEQL*DPGQPL
Trigger: CAGTGGCTGGCCTGGATCCCACAGCTGCTCACCTGC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCACGAGGCGCATCTGTaGGGAAACTGCCACAACCCG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGHEAHL*GNCHNP
Trigger: CGGGTTGTGGCAGTTTCCCCACAGATGCGCCTCGTG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGCTCGATGCCCTTCTTaGCGCAGCGCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGARCPS*RSAACR
Trigger: TCTACAAGCAGCGCTGCGCCAAGAAGGGCATCGAGC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGAGGACCTGGTGGCTaGCTTGGGTTCCCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGGPGG*LGFPAP
Trigger: AGGCGCGGGGAACCCAAGCCAGCCACCAGGTCCTCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTATGTCGCGGAGGACCTaGTGGCTGGCTTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSMSRRT*WLAWVP
Trigger: GGGAACCCAAGCCAGCCACCAGGTCCTCCGCGACAT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAGTAGTCCGTGGCATTaGGGAAGGTGTGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSSPWH*GRCAAP
Trigger: GGGCGCTGCACACCTTCCCCAATGCCACGGACTACT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGGCCGGAGACCCCGATaGTGGTCAGAAACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASGRRPR*WSETQK
Trigger: TTTCTGAGTTTCTGACCACCATCGGGGTCTCCGGCC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGGGCGACCGCAATCATaGACGCTGTCAACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQGRPQS*TLSTGR
Trigger: CCGGCCCGTTGACAGCGTCCATGATTGCGGTCGCCC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCACCTTAAAGTTTGGCTaGGCGAAGCACCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSTLKFG*AKHRAT
Trigger: GGTCGCCCGGTGCTTCGCCCAGCCAAACTTTAAGGT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCATTCCGGGTGGCCGTaGCGGCCACAGTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYHSGWP*RPQSQP
Trigger: TGGCTGTGACTGTGGCCGCCACGGCCACCCGGAATG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCCTTCACATTCCGGGTaGCCGTGGCGGCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPPSHSG*PWRPQS
Trigger: TGACTGTGGCCGCCACGGCCACCCGGAATGTGAAGG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGTGGCCTGGCCCCGTaGATCCACGCCGAACGCTCA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGGLAP*IHAERS
Trigger: TGAGCGTTCGGCGTGGATCCACGGGGCCAGGCCACC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCACTGAATCCGAAGTaGATGCGTGTGGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPLNPK*MRVALP
Trigger: CGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTGCGGGTTTGCTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTGCATGAGCCCACACTGTCTCTaGGGCCTCTGGTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PAGLLEMVFGEKGHIVCMSPHCL*GLWFPR
Trigger: CCTTGGGAACCAGAGGCCCCAGAGACAGTGTGGGCT...CATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGCAAACCCGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAGGCGCATCCTGACGTaGGTTTATGCATTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTRRILT*VYAFWK
Trigger: CTTCCAAAATGCATAAACCCACGTCAGGATGCGCCT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGTGATCCCCTCGGAATaGTGGAATGTGTTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCVIPSE*WNVFES
Trigger: AGACTCGAACACATTCCATCATTCCGAGGGGATCAC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATGGCAATGGTGTTCATaGTCAAGGGCACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKWQWCS*SRAQTQ
Trigger: CTGAGTTTGTGCCCTTGATCATGAACACCATTGCCA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCCTTTCACCATCTGCTaGGAATACTTAGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTPFTIC*EYLVTN
Trigger: GTTGGTGACTAAGTATTCTCAGCAGATGGTGAAAGG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCACGGCTCCAAGTTCTaGCTGAGGCTTACACTTCTT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCHGSKF*LRLTLL
Trigger: AAGAAGTGTAAGCCTCAGTCAGAACTTGGAGCCGTG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAACTTCGACAGTCTGTaGCTTGGAATGTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTNFDSL*LGMSAC
Trigger: ACAAGCAGACATTCCAAGTCACAGACTGTCGAAGTT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTGTGCAGGCCACTCTaGAGCATGTTCAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLCRPL*SMFSPC
Trigger: GCAAGGGCTGAACATGCTTCAGAGTGGCCTGCACAA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTGGAGTTTGGAGAGGTaGCTTCTCGAACCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCWSLER*LLEPSR
Trigger: ACGACTTGGTTCGAGAAGTCACCTCTCCAAACTCCA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGGCTTCACCAGTGTCTaGGGAGCAGCCGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLGFTSV*GAAGIR
Trigger: TCTGATCCCGGCTGCTCCTCAGACACTGGTGAAGCC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGCCAGGCGAAGGTCATaGGGCGGCGCAGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTARRRS*GGAACC
Trigger: ACAGCAAGCTGCGCCGCCTCATGACCTTCGCCTGGC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCCATCGCCTGTCTaGCGATCGCTCGAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLWPSPV*RSLELP
Trigger: TGGAAGCTCGAGCGATCGTCAGACAGGCGATGGCCA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTGGCCATCGCCTGTCTaGCGATCGCTCGAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSWPSPV*RSLELP
Trigger: TGGAAGCTCGAGCGATCGTCAGACAGGCGATGGCCA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCCCCTCCTCCACAATaGTCTTCCGGGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQAPPPQ*SSGSSG
Trigger: CCCACTGGACCCGGAAGATCATTGTGGAGGAGGGGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCCGGGTAGTACACCTTaGAGTGTTGCACTATCAGGT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCPGSTP*SVALSG
Trigger: ACCTGATAGTGCAACACTTCAAGGTGTACTACCCGG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCCGGCTGCTGGTCCTTaGTCCTCTGCAGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYPAAGP*SSAAPT
Trigger: AGTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTCCCAAAGACTGCACTaGTGGCTCCGGTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSQRLH*WLRWPS
Trigger: GGACGGCCACCGGAGCCATCAGTGCAGTCTTTGGGA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATCCCAAAGACTGCACTaGTGGCTCCGGTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSQRLH*WLRWPS
Trigger: GGACGGCCACCGGAGCCATCAGTGCAGTCTTTGGGA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCCCAAAGACTGCACTaGTGGCTCCGGTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSQRLH*WLRWPS
Trigger: GGACGGCCACCGGAGCCATCAGTGCAGTCTTTGGGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGTGTTGTCATTAACCTaGCAGGCCACGCGGATAAGG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKVLSLT*QATRIR
Trigger: CCTTATCCGCGTGGCCTGTCAGGTTAATGACAACAC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACGAACCACTGCAGCTTaGGTTCGGACTTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKRTTAA*VRTWAT
Trigger: TGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACAGCTCGCTTGTACCTaGGGTGGCTTCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLQLACT*GGFGAS
Trigger: GGAAGCACCGAAGCCACCTCAGGTACAAGCGAGCTG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGGGCGTGCTGGTCTaGTCCCCAGGAGCTAGTTCG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTILGVLV*SPGASS
Trigger: CGAACTAGCTCCTGGGGATCAGACCAGCACGCCCAA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTTGGGCGTGCTGGTCTaGTCCCCAGGAGCTAGTTCG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSLGVLV*SPGASS
Trigger: CGAACTAGCTCCTGGGGATCAGACCAGCACGCCCAA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATTGGGCGTGCTGGTCTaGTCCCCAGGAGCTAGTTCG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLGVLV*SPGASS
Trigger: CGAACTAGCTCCTGGGGATCAGACCAGCACGCCCAA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTCCCGCTGCACCTGGTaGCTGCCGCTGCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSRCTW*LPLHRN
Trigger: ATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACCTGCTGCGGCGGGGTaGTGCTCTCCTGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLPAAAG*CSPAHK
Trigger: TTTATGAGCAGGAGAGCATCACCCCGCCGCAGCAGG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCCTGCTGCGGCGGGGTaGTGCTCTCCTGCTCATAAA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWPAAAG*CSPAHK
Trigger: TTTATGAGCAGGAGAGCATCACCCCGCCGCAGCAGG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCATGTGGCCTTTGGACTaGCCGTACTCCGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGMWPLD*PYSVRA
Trigger: AGCCCTGACGGAGTACGGTCAGTCCAAAGGCCACAT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTGAAGCTGATGCATaGACCCCAAGCATAGCGTTA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCAEADA*TPSIAL
Trigger: TAACGCTATGCTTGGGGTTCATGCATCAGCTTCAGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTCGGACTTGTTGATCTaGGCCAAGAACATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSDLLI*AKNIPF
Trigger: GAAGGGAATGTTCTTGGCTCAGATCAACAAGTCCGA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACTCGCTGCATGTGCATaGTTCGGCTGCAGCGCCACA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLAACA*FGCSAT
Trigger: TGTGGCGCTGCAGCCGAATCATGCACATGCAGCGAG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAGTCAAAATCCGTCGTaGACTGGCCTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSQNPS*TGLSAS
Trigger: AGAAGCTGAAAGGCCAGTTCACGACGGATTTTGACT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTACGCTCCTCTCGCCGTaGCTCTGTGAGGCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTTLLSP*LCEAGV
Trigger: GACGCCTGCCTCACAGAGTCACGGCGAGAGGAGCGT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGAGCCAGCTGGATGGTaGACATCTTCCGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKEPAGW*TSSGTS
Trigger: GGACGTTCCGGAAGATGTTCACCATCCAGCTGGCTC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGCGGTGACGGCTTTCTaGACCAGGGACACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSAVTAF*TRDTSC
Trigger: GCAACTGGTGTCCCTGGTTCAGAAAGCCGTCACCGC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAGCACGAAGCTGCTGTaGGGTGTTATTTCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSTKLL*GVISER
Trigger: TCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCGTGGTAGCCTGGAACCCCTTTACTGTGTGTTaGTTGGGCACAGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: WWDLGKLSCNHHSVVAWNPFTVC*LGTVAP
Trigger: GGGAGCCACTGTGCCCAATCAACACACAGTAAAGGG...GTTCCAGGCTACCACGGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCGAGGTCGGCCAGCGTaGTGTAGGCGAGGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTRGRPA*CRRGAL
Trigger: TAAGGCCCCTCGCCTACAGCACGCTGGCCGACCTCG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCAGGACATGGTCTGGATaGTGCTGGGCAGGGACTCAT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSRTWSG*CWAGTH
Trigger: ATGAGTCCCTGCCCAGCAGCATCCAGACCATGTCCT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCCATTGCCACTCTCCTaGTCGCTCTTGGAACGGATG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGPLPLS*SLLERM
Trigger: CATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGGACGTCTCTCCCATTaGCACTCTCCTGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKGRLSH*HSPARS
Trigger: AGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTGTCCTTTTCTCCTTaGTTCTCGAAGGGAGGCACG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLSFSP*FSKGGT
Trigger: CGTGCCTCCCTTCGAGAAGCAAGGAGAAAAGGACAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAAGAGGTCCTTCATGTaGTGCTTGTGCAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASKRSFM*CLCRPL
Trigger: GAGTGGCCTGCACAAGCAGCACATGAAGGACCTCTT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGCCTGCATGAGCTCTaGGCGCACCGGCTGGATGTG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSLHEL*AHRLDV
Trigger: CACATCCAGCCGGTGCGCGCAGAGCTCATGCAGGCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAGGCCACGTGGGAGATaGTGTCAGCAGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGRPRGR*CQQGCV
Trigger: TACGCAACCCTGCTGACAGCATCTCCCACGTGGCCT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTGTAAAGTTGGGGTGTaGCAGGAGCTGGTAGAGTGC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASCKVGV*QELVEC
Trigger: GCACTCTACCAGCTCCTGGCACACCCCAACTTTACA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTGTTCATAACAACATaGACACAGGCGCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLFITT*TQALHD
Trigger: ATCGTGGAGCGCCTGTGTGCATGTTGTTATGAACAG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTAGCGAATGCATGGCCTaGTTCCTCACAGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSECMA*FLTVEF
Trigger: AAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAACACCTGCAGCGAATaGATGGCCTGCTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKNTCSE*MACFLT
Trigger: TGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACATCAGGCCAATCTGTaGGTTGGCAGGCTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKHQANL*VGRLVS
Trigger: CGACACCAGCCTGCCAACGCACAGATTGGCCTGATG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGATGTTCTCCTTGCGGTaGCTCTCTTGGAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRMFSLR*LSWKFS
Trigger: TGAGAACTTCCAAGAGAGGCACCGCAAGGAGAACAT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCTCCGTAATTCCTTTTaGAGTAGTTCAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTLRNSF*SSSAGS
Trigger: ACTGCCTGCTGAACTACTGCAAAAGGAATTACGGAG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGGAGGTCCCAAGAGCTaGTCTCCTTCCCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGGGPKS*SPSPFS
Trigger: TGAGAAGGGGGAAGGAGAGCAGCTCTTGGGACCTCC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATCCAGCATGTCCGCCTaGTTCTCGGGGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSSMSA*FSGSRT
Trigger: GGTCCTGGACCCCGAGAAGCAGGCGGACATGCTGGA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTCCAGCATGTCCGCCTaGTTCTCGGGGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSSMSA*FSGSRT
Trigger: GGTCCTGGACCCCGAGAAGCAGGCGGACATGCTGGA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCGCTCGAGCTTCCATTaGGTGAGCCTTGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRSSFH*VSLEET
Trigger: AGTCTCCTCAAGGCTCACGCAATGGAAGCTCGAGCG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATGGGTCAGCATCTGGTaGCCGTCCTCCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLWVSIW*PSSILA
Trigger: GGCCAGGATGGAGGACGGGCACCAGATGCTGACCCA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGAATGTGGACCAGCTaGGGGACGGTGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSRMWTS*GTVCPS
Trigger: GGAGGGGCACACCGTCCCGCAGCTGGTCCACATTCT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAGAATGTGGACCAGCTaGGGGACGGTGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLRMWTS*GTVCPS
Trigger: GGAGGGGCACACCGTCCCGCAGCTGGTCCACATTCT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGCGCTCACCATGTGCTaGACCAAGTGGTGCCGTACC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSALTMC*TKWCRT
Trigger: GGTACGGCACCACTTGGTGCAGCACATGGTGAGCGC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGTGAAGCCCAGCCTCTaGATGGCGCTCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLVKPSL*MALTMC
Trigger: GCACATGGTGAGCGCCATGCAGAGGCTGGGCTTCAC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAACAGTGTCTGTGTGCTaGTTGTCAATGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKTVSVC*LSMGLA
Trigger: CGCCAAGCCCATTGACAAGCAGCACACAGACACTGT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCACTTCTAGGCCCGTaGAGATATTCCCATAGTTCA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRALLGP*RYSHSS
Trigger: TGAACTATGGGAATATCTGCACGGGCCTAGAAGTGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGCGGCAATTCCACGCTaGAGAGGTTTGAAGCTACTG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKAAIPR*RGLKLL
Trigger: CAGTAGCTTCAAACCTCTGCAGCGTGGAATTGCCGC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCTGTTGGGAAAATaGTCATCAGGCGCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCALLGK*SSGARE
Trigger: TTCTCTCGCGCCTGATGAGCATTTTCCCAACAGAGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGACCTTTCCGACGGCTaGGTAGAGGCACTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLDLSDG*VEALQL
Trigger: GAGCTGGAGTGCCTCTACGCAGCCGTCGGAAAGGTC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCTCCATGCTCATCACTaGCAGGCGCGTCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLHAHH*QARLHQ
Trigger: CTGGTGAAGACGCGCCTGGCAGTGATGAGCATGGAG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTGGTGCCAATGGGGGTaGTCTTCTCACACACGGCCA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGWCQWG*SSHTRP
Trigger: TGGCCGTGTGTGAGAAGAGCACCCCCATTGGCACCA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCTCCTTGGCAGCTGGTaGCAATGGGGGTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLLGSW*QWGCSS
Trigger: AGAAGAGCACCCCCATTGGCACCAGCTGCCAAGGAG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCTTTGGTTTTGGGCGTaGTGGTCTGATCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLWFWA*WSDPQE
Trigger: CTCCTGGGGATCAGACCAGCACGCCCAAAACCAAAG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGACCCACGTCTTCTCTaGCAGCGTCGTGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGDPRLL*QRRGNV
Trigger: CACATTTCCACGACGCTGGCAGAGAAGACGTGGGTC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTCACCCGCGAGTGCATaGTGCTGTCTGTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSPASA*CCLSER
Trigger: CCTCTCTGACAGACAGCAGCATGCACTCGCGGGTGA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATCACCCGCGAGTGCATaGTGCTGTCTGTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSPASA*CCLSER
Trigger: CCTCTCTGACAGACAGCAGCATGCACTCGCGGGTGA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTTTCAAAAGCCTGGTaGTCCAACATCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKFSKAW*SNISVD
Trigger: GTCCACGCTGATGTTGGAGCACCAGGCTTTTGAAAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTCCAGTATCTCCTGCTaGGGCGGGGTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSSISC*GGVMLS
Trigger: GGAGAGCATCACCCCGCCGCAGCAGGAGATACTGGA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCCAGTATCTCCTGCTaGGGCGGGGTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTISSISC*GGVMLS
Trigger: GGAGAGCATCACCCCGCCGCAGCAGGAGATACTGGA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTACTTGCACCGCTTCTaGCACAGACCAGCCCACATA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASYLHRF*HRPAHI
Trigger: TATGTGGGCTGGTCTGTGGCAGAAGCGGTGCAAGTA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTGGAGTTCGATGATTTaGTGGGCTGCCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCWSSMI*WAACRR
Trigger: TCTCCTACAGGCAGCCCAGCAAATCATCGAACTCCA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTTTGCCCATGACGCCTaGCAGCTGGAGGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASFAHDA*QLEVAF
Trigger: AAATGCTACCTCCAGCTGGCAGGCGTCATGGGCAAA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAGCACATCGTGCATCTaGACAGCTGCAGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSTSCI*TAAEKA
Trigger: AGCCTTCTCTGCAGCTGTGCAGATGCACGATGTGCT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCCACATGGGTGCTGTTaGTCTTATGGGCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGPHGCC*SYGPWI
Trigger: GATCCAGGGCCCATAAGAGCAACAGCACCCATGTGG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCAGCGCCACATGGGTaGTGTTGCTCTTATGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLAAPHG*CCSYGP
Trigger: GGGCCCATAAGAGCAACAGCACCCATGTGGCGCTGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGCAGCGCCACATGGGTaGTGTTGCTCTTATGGGCCC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYAAPHG*CCSYGP
Trigger: GGGCCCATAAGAGCAACAGCACCCATGTGGCGCTGC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGCAGCGCCACATGGGTaGTGTTGCTCTTATGGGCCC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSAAPHG*CCSYGP
Trigger: GGGCCCATAAGAGCAACAGCACCCATGTGGCGCTGC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAGCTCTCGCTGCATGTaGATGATTCGGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGSSRCM*MIRLQR
Trigger: GCGCTGCAGCCGAATCATGCACATGCAGCGAGAGCT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGGGTGGAGCTCTCGCTaGATGTGCATGATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGGWSSR*MCMIRL
Trigger: CAGCCGAATCATGCACATGCAGCGAGAGCTCCACCC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCCATCTGATCGACGATaGCTTCCAGGGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCPSDRR*LPGKTE
Trigger: TTCTGTCTTCCCTGGAAGGCATCGTCGATCAGATGG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGGCCCACCCCAAACGTaGTCACCAACTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKGPPQT*SPTSSQ
Trigger: TTGTGAAGAAGTTGGTGAGCACGTTTGGGGTGGGCC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCAGAGACTCAGAGGCTaGGCTGGAGAACATGGTCGA +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGQRLRG*AGEHGR
Trigger: TCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAAGAATTTGGGGAGTTaGTTGGTCTTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKKNLGS*LVLASK
Trigger: CTTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAGCAGACGCAGCAGCTaGAACACACGCTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTISRRSS*NTRSSR
Trigger: GCGAGAGGAGCGTGTGTTGCAGCTGCTGCGTCTGCT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAGCAGACGCAGCAGCTaGAACACACGCTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSRRSS*NTRSSR
Trigger: GCGAGAGGAGCGTGTGTTGCAGCTGCTGCGTCTGCT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGAGATGGGGTTGTCATaGTCGATGCCCTTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGEMGLS*SMPFLA
Trigger: CGCCAAGAAGGGCATCGAGCATGACAACCCCATCTC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCATACCAACCATTTCTaGGGGAGGCACTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCHTNHF*GRHCVL
Trigger: GAGAACACAGTGCCTCCCCCAGAAATGGTTGGTATG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCATGCAAGGAATGAACTaGTTTCTCAGCTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTMQGMN*FLSSVV
Trigger: CACCACAGAGCTGAGAAACCAGTTCATTCCTTGCAT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGCCTTAGAGTCTCTCTaGCAGTATATCCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRALESL*QYILSQ
Trigger: TTGGCTCAGGATATACTGCCAGAGAGACTCTAAGGC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTTCTTGGCGAAGAGCTaGACGGCGAGGGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWFLAKS*TARERS
Trigger: CGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGAA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATGGAGAGCTCCACGTTaGAGCCCATTTCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKWRAPR*SPFLAG
Trigger: GCCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACCCTTGCAGGAGGTTTaGAAGGAGAGGCAAGAACTC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGPLQEV*KERQEL
Trigger: GAGTTCTTGCCTCTCCTTCCAAACCTCCTGCAAGGG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGTGGCGGATCAAGCTaGCGACAAAGGGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSGGSS*RQRAGR
Trigger: GCGCCCTGCCCTTTGTCGCCAGCTTGATCCGCCACT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGAAACATGGCTGTGCTaGGCTGGCTGCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYETWLC*AGCPPG
Trigger: ACCAGGTGGGCAGCCAGCCCAGCACAGCCATGTTTC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGAAAACAGGGGCAGCTaGCAGGCCCTCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWENRGS*QALSLE
Trigger: CTCCAAGGAGAGGGCCTGCCAGCTGCCCCTGTTTTC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGAAAACAGGGGCAGCTaGCAGGCCCTCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYENRGS*QALSLE
Trigger: CTCCAAGGAGAGGGCCTGCCAGCTGCCCCTGTTTTC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGAAAACAGGGGCAGCTaGCAGGCCCTCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIENRGS*QALSLE
Trigger: CTCCAAGGAGAGGGCCTGCCAGCTGCCCCTGTTTTC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTCAGGAATGTCTGCTaGTTCTGGAGAACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKFRNVC*FWRTQV
Trigger: CACTTGGGTTCTCCAGAACCAGCAGACATTCCTGAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATGGAAAGACTTTTCCTaGGCGGCCACGATCTCTTCG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGWKDFS*AATISS
Trigger: CGAAGAGATCGTGGCCGCCCAGGAAAAGTCTTTCCA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGGCCAATCTGTGCGTTaGCAGGCTGGTGTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLGQSVR*QAGVGA
Trigger: TGCTCCGACACCAGCCTGCCAACGCACAGATTGGCC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCTCTGGCCCCCTTTGTaGGTGATCACCACCACTTCC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLWPPL*VITTTS
Trigger: GGAAGTGGTGGTGATCACCCACAAAGGGGGCCAGAG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACTCTGGCCCCCTTTGTaGGTGATCACCACCACTTCC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKLWPPL*VITTTS
Trigger: GGAAGTGGTGGTGATCACCCACAAAGGGGGCCAGAG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCAGGGGCTCTCGGAATaGACTCCCCGCCTCGATCAG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYQGLSE*TPRLDQ
Trigger: CTGATCGAGGCGGGGAGTCCATTCCGAGAGCCCCTG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCCAGAGAGTGCTGGCTaGCCAGCCAGGAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWPESAG*PARSHR
Trigger: ACGATGACTCCTGGCTGGCCAGCCAGCACTCTCTGG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATTGCGGTGCCTCTCTTaGAAGTTCTCACTCACCCAC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGLRCLS*KFSLTH
Trigger: GTGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGCTCCTTCCAGTTGGTaGCTGCCATGTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSAPSSW*LPCSPC
Trigger: GCAAGGAGAACATGGCAGCCACCAACTGGAAGGAGC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAAGGCTCGGAGCAGCTaGAACAGCAATTCTATATCT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTKARSS*NSNSIS
Trigger: AGATATAGAATTGCTGTTCCAGCTGCTCCGAGCCTT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTGGGTTATCTCCTTCTaGATTGGGAGGTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCWVISF*IGRSQE
Trigger: CTCTTGGGACCTCCCAATCCAGAAGGAGATAACCCA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGCTCCACCAGCAGCGTaGCGTACTGCAGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWAPPAA*RTAAGR
Trigger: TCTACCTGCTGCAGTACGCCACGCTGCTGGTGGAGC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCTCCACCAGCAGCGTaGCGTACTGCAGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLAPPAA*RTAAGR
Trigger: TCTACCTGCTGCAGTACGCCACGCTGCTGGTGGAGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTTGTCATGGATGTGGTaGGGGGCGTGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLSWMW*GACSTS
Trigger: GCTGGTGGAGCACGCCCCCCACCACATCCATGACAA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTTGTCATGGATGTGGTaGGGGGCGTGCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSLSWMW*GACSTS
Trigger: GCTGGTGGAGCACGCCCCCCACCACATCCATGACAA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTGAATCCGGCTGCTaGTCCTTGATCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSESGC*SLILCS
Trigger: GCTGCAGAGGATCAAGGACCAGCAGCCGGATTCAGA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAGGATGGCTGGGGACTaGAGGACAGTTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRMAGD*RTVSRK
Trigger: CTTCCTGCTAACTGTCCTCCAGTCCCCAGCCATCCT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGGGAGGGATTGGCATTaGTGGCCTTCTCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSGRDWH*WPSRSW
Trigger: CCAACTACGAGAAGGCCACCAATGCCAATCCCTCCC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAGAGCTGGGAGGGATTaGCATTGGTGGCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRAGRD*HWWPSR
Trigger: ACGAGAAGGCCACCAATGCCAATCCCTCCCAGCTCT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAGGGTCCCGAAGAGCTaGGAGGGATTGGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGRVPKS*EGLALV
Trigger: CACCAATGCCAATCCCTCCCAGCTCTTCGGGACCCT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGCCTGTCTATGTAGCTaGGGTTGTTGCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGACLCS*GCCCRQ
Trigger: CTGCCTGCAGCAACAACCCCAGCTACATAGACAGGC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACTTTGCCCTGATGAGTaGCTGGGCACAGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQLCPDE*LGTAQP
Trigger: GGGCTGCGCTGTGCCCAGCCACTCATCAGGGCAAAG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGGGAGCATGGCTCCTTaGCAGCTGGTGCCAATGGGG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSGSMAP*QLVPMG
Trigger: CCCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGGGAGCATGGCTCCTTaGCAGCTGGTGCCAATGGGG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQGSMAP*QLVPMG
Trigger: CCCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCACGCACTGGGACATaGCTTCCACAAAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGARTGT*LPQSSS
Trigger: TGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATTGGCGGCACGCACTaGGACATGGCTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSIGGTH*DMASTK
Trigger: CTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAAT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGACGCAGGGTCGGATaGGGATTGGCGGCACGCACT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGRRVG*GLAART
Trigger: AGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGCTCCAACATCAGCGTaGACCGGAACCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSAPTSA*TGTRGC
Trigger: ACAACCTCTGGTTCCGGTCCACGCTGATGTTGGAGC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGAGCATCGAATCCAGTaGTCTTCCCAGAGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCEHRIQ*SSQSWY
Trigger: ATACCAGCTCTGGGAAGACCACTGGATTCGATGCTC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACCAGCGCCTCCTTCATaGCAGTCCAGTTGGACACCC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIPAPPS*QSSWTP
Trigger: GGGTGTCCAACTGGACTGCCATGAAGGAGGCGCTGG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCCAGCGCCTCCTTCATaGCAGTCCAGTTGGACACCC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYPAPPS*QSSWTP
Trigger: GGGTGTCCAACTGGACTGCCATGAAGGAGGCGCTGG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACCAGCGCCTCCTTCATaGCAGTCCAGTTGGACACCC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLPAPPS*QSSWTP
Trigger: GGGTGTCCAACTGGACTGCCATGAAGGAGGCGCTGG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACCTCGGGGTGGCAGATaGCCAGGTATCCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLPRGGR*PGIRGT
Trigger: TGTACCGCGGATACCTGGCCATCTGCCACCCCGAGG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCCCTCGGGGTGGCAGATaGCCAGGTATCCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSPRGGR*PGIRGT
Trigger: TGTACCGCGGATACCTGGCCATCTGCCACCCCGAGG...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATGCTGCTCCTCGGGGTaGCAGATGGCCAGGTATCCG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLCCSSG*QMARYP
Trigger: CGGATACCTGGCCATCTGCCACCCCGAGGAGCAGCA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGAGGCGTGTGCACGTaGGACACTACGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQRGVCT*DTTWGS
Trigger: GCTGCCCCACGTAGTGTCCCACGTGCACACGCCTCT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAGAGGCGTGTGCACGTaGGACACTACGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLRGVCT*DTTWGS
Trigger: GCTGCCCCACGTAGTGTCCCACGTGCACACGCCTCT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAGTTCGATGATTTGCTaGGCTGCCTGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSSMIC*AACRRG
Trigger: GCCTCTCCTACAGGCAGCCCAGCAAATCATCGAACT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAAGATGCTGCTCCAGTaGGACAAGTCGTCAGACACG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKKMLLQ*DKSSDT
Trigger: CGTGTCTGACGACTTGTCCCACTGGAGCAGCATCTT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAAGATGCTGCTCCAGTaGGACAAGTCGTCAGACACG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGKMLLQ*DKSSDT
Trigger: CGTGTCTGACGACTTGTCCCACTGGAGCAGCATCTT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGGTAGTCGCCCCACATaGCCCAGGCTTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIGSRPT*PRLSPA
Trigger: TGCTGGTGAAAGCCTGGGCCATGTGGGGCGACTACC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAATCCAGGCCAGCCACTaGATGGGTGGCACACCAATG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKIQASH*MGGTPM
Trigger: CATTGGTGTGCCACCCATCCAGTGGCTGGCCTGGAT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGGTACAGGGTCCGGATaGGAAAGTAGACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGGTGSG*ESRPLG
Trigger: CCCAAGCGGTCTACTTTCCCATCCGGACCCTGTACC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGGCTGCAGCGCCACATaGGTGCTGTTGCTCTTATGG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGGCSAT*VLLLLW
Trigger: CCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAACATGGTCGAGACGTTaGACACATTCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKTWSRR*THSPGP
Trigger: TGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGTTCATGACGAGGTATaGGTAGATCTTGCCATTGTG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTVHDEV*VDLAIV
Trigger: CACAATGGCAAGATCTACCCATACCTCGTCATGAAC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACACGAGGCGCATCTGTaGGGAAACTGCCACAACCCG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLHEAHL*GNCHNP
Trigger: CGGGTTGTGGCAGTTTCCCCACAGATGCGCCTCGTG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGCTCGATGCCCTTCTTaGCGCAGCGCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGARCPS*RSAACR
Trigger: TCTACAAGCAGCGCTGCGCCAAGAAGGGCATCGAGC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAATGTCGCGGAGGACCTaGTGGCTGGCTTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQMSRRT*WLAWVP
Trigger: GGGAACCCAAGCCAGCCACCAGGTCCTCCGCGACAT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAGTAGTCCGTGGCATTaGGGAAGGTGTGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSSPWH*GRCAAP
Trigger: GGGCGCTGCACACCTTCCCCAATGCCACGGACTACT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGTAGTCCGTGGCATTaGGGAAGGTGTGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSSPWH*GRCAAP
Trigger: GGGCGCTGCACACCTTCCCCAATGCCACGGACTACT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCACGTCCAGTAGTCCGTaGCATTGGGGAAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSTSSSP*HWGRCA
Trigger: TGCACACCTTCCCCAATGCCACGGACTACTGGACGT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGGCGACCGCAATCATaGACGCTGTCAACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGRPQS*TLSTGR
Trigger: CCGGCCCGTTGACAGCGTCCATGATTGCGGTCGCCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTACCTTAAAGTTTGGCTaGGCGAAGCACCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGTLKFG*AKHRAT
Trigger: GGTCGCCCGGTGCTTCGCCCAGCCAAACTTTAAGGT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGCTGTCCATGTTCTCTaGCTGCCCGGCGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFAVHVL*LPGGRE
Trigger: CTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCATTCCGGGTGGCCGTaGCGGCCACAGTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFHSGWP*RPQSQP
Trigger: TGGCTGTGACTGTGGCCGCCACGGCCACCCGGAATG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACCTTCACATTCCGGGTaGCCGTGGCGGCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLPSHSG*PWRPQS
Trigger: TGACTGTGGCCGCCACGGCCACCCGGAATGTGAAGG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCTTTCATTTGACCCTGTaGTGGGATTTGGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPFHLTL*WDLGKL
Trigger: GAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCACTGCACCCAGCAGGGGTTGAACTTTTTAAGCCAATTGCGGAAACATGCCCTTGGCCATTCCAAGGTTaGTTTTCCCAACAACCAGGG +
Preference number: 4 (lower is better)
Translates to: PLHPAGVELFKPIAETCPWPFQG*FSQQPG
Trigger: CCCTGGTTGTTGGGAAAACCAACCTTGGAATGGCCA...AGGGCATGTTTCCGCAATTGGCTTAAAAAGTTCAACCCCTGCTGGGTGCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCAATGCTGTGCCGGGTaGACAGAGCTGAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSQCCAG*TELRFM
Trigger: CATGAACCTCAGCTCTGTCCACCCGGCACAGCATTG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACCTGCAGTTTGTGACTaGGTCCACGCGAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLPAVCD*VHASPA
Trigger: AGCGGGACTCGCGTGGACCCAGTCACAAACTGCAGG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTATCGTGCGGTGGTTCTaGCAAGCGGTGGAGACGTTC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGIVRWF*QAVETF
Trigger: GAACGTCTCCACCGCTTGCCAGAACCACCGCACGAT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 72 bp CAACACAACTGCGATCTCAAGCTGCCAAGGGACATCTaGTCAAGGCCCTTTCATTTGACCCTGTGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: QHNCDLKLPRDI*SRPFHLTLWWD
Trigger: ATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTCCCTTGGCAGCTTGAGATCGCAGTTGTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 72 bp GTCCTAGGGCTGGACTGCCCACACGGTGACTCTCTTTaGTCCTTTTTCAGCTTTAACCGGATCGACATTCCA +
Preference number: 4 (lower is better)
Translates to: VLGLDCPHGDSL*SFFSFNRIDIP
Trigger: TGGAATGTCGATCCGGTTAAAGCTGAAAAAGGACAAAAGAGAGTCACCGTGTGGGCAGTCCAGCCCTAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 72 bp ATTCTCCTCTCTTCAGACTTGAAACTCCACATGTCCTaGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTA +
Preference number: 4 (lower is better)
Translates to: ILLSSDLKLHMS*SVLERPWDVPL
Trigger: TAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTGGAGTTTCAAGTCTGAAGAGAGGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCTCACGCTCCGGGTTaGCTTTCACAGCAATCGTTG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPHAPG*LSQQSL
Trigger: CAACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCAGAAGCTCCTTTCTaGGGTGTGCAGTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSEAPF*GVQSLL
Trigger: CAGCAGAGACTGCACACCTCAGAAAGGAGCTTCTGA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGACCAGGTGCTTTGCATaGTGTTATGCCCCACGTGAT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASTRCFA*CYAPRD
Trigger: ATCACGTGGGGCATAACATCATGCAAAGCACCTGGT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAACCAGGTGCTTTGCATaGTGTTATGCCCCACGTGAT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKTRCFA*CYAPRD
Trigger: ATCACGTGGGGCATAACATCATGCAAAGCACCTGGT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTGTGCAGGCCACTCTaGAGCATGTTCAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLCRPL*SMFSPC
Trigger: GCAAGGGCTGAACATGCTTCAGAGTGGCCTGCACAA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAATGTCTGAGACCCATTaGGTGCAGACACCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGMSETH*VQTPRD
Trigger: ATCCCTTGGTGTCTGCACTCAATGGGTCTCAGACAT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGGCTGACCAATGTCTaGGACCCATTGAGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSWLTNV*DPLSAD
Trigger: GTCTGCACTCAATGGGTCTCAGACATTGGTCAGCCA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACCTTGGAGCCCAGGATaGTACTTGCAACATCAAATA +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKPWSPG*YLQHQI
Trigger: TATTTGATGTTGCAAGTATCATCCTGGGCTCCAAGG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTGGGAAGAGCCTCGTaGCCGAAGTCAGGCGATTCA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLGRAS*PKSGDS
Trigger: TGAATCGCCTGACTTCGGTCACGAGGCTCTTCCCAA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATTGGGAAGAGCCTCGTaGCCGAAGTCAGGCGATTCA +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKLGRAS*PKSGDS
Trigger: TGAATCGCCTGACTTCGGTCACGAGGCTCTTCCCAA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCAGCCGGGATCAGATaGAAAAGGTTTATAATTGCT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTAAGIR*KRFIIA
Trigger: AGCAATTATAAACCTTTTTCATCTGATCCCGGCTGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGTCGAGTCAGGAACTTaGTCAGGGGCTCTCGGAATG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGVESGT*SGALGM
Trigger: CATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGAC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCCTTGAGGAGACTATaGAAAACCTGCAGGACGATC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGALRRL*KTCRTI
Trigger: GATCGTCCTGCAGGTTTTTCATAGTCTCCTCAAGGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATGGCCATCGCCTGTCTaGCGATCGCTCGAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLWPSPV*RSLELP
Trigger: TGGAAGCTCGAGCGATCGTCAGACAGGCGATGGCCA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCGGCTGCTGGTCCTTaGTCCTCTGCAGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPAAGP*SSAAPT
Trigger: AGTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAATTTGGGTCCATATCTaGATCCGGCTGCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGIWVHI*IRLLVL
Trigger: AAGGACCAGCAGCCGGATTCAGATATGGACCCAAAT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTCTCTTAATGGAGGATaGGACAGAATTGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSLNGG*DRIDSF
Trigger: GAAGGAGTCAATTCTGTCTCATCCTCCATTAAGAGA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCTTCCTGACGCTGCCTaGGGGTTTAAATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLPDAA*GFKCSR
Trigger: CCGGGAGCATTTAAACCCTCAGGCAGCGTCAGGAAG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATTGGGCGTGCTGGTCTaGTCCCCAGGAGCTAGTTCG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQLGVLV*SPGASS
Trigger: CGAACTAGCTCCTGGGGATCAGACCAGCACGCCCAA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCTGAACGAAAGCGCTaGGCAGCGCTCCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPAERKR*AALQSS
Trigger: TGAAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAATGTGGCCTTTGGACTaGCCGTACTCCGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLMWPLD*PYSVRA
Trigger: AGCCCTGACGGAGTACGGTCAGTCCAAAGGCCACAT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGGACGAGGTAGGGGTTaGTGTGGCCTTTGGACTGAC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIGRGRG*CGLWTD
Trigger: GTCAGTCCAAAGGCCACATCAACCCCTACCTCGTCC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGCTGTAAGCCTGCGTTaGTTTGTGCAGCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSAVSLR*FVQLPG
Trigger: TCCAGGAAGCTGCACAAATCAACGCAGGCTTACAGC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGCTGAAGCTGATGCATaGACCCCAAGCATAGCGTTA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASAEADA*TPSIAL
Trigger: TAACGCTATGCTTGGGGTTCATGCATCAGCTTCAGC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTATCCAGAGCTACATTaGCCAGTCCTTGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASYPELH*PVLVSG
Trigger: CCCGGAAACAAGGACTGGTCAATGTAGCTCTGGATA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATATCCAGAGCTACATTaGCCAGTCCTTGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKYPELH*PVLVSG
Trigger: CCCGGAAACAAGGACTGGTCAATGTAGCTCTGGATA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGACTCGTTTTTGCCCATaGCGCCTGCCAGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPTRFCP*RLPAGG
Trigger: ACCTCCAGCTGGCAGGCGTCATGGGCAAAAACGAGT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTACTCGTTTTTGCCCATaGCGCCTGCCAGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSTRFCP*RLPAGG
Trigger: ACCTCCAGCTGGCAGGCGTCATGGGCAAAAACGAGT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTCGGACTTGTTGATCTaGGCCAAGAACATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSDLLI*AKNIPF
Trigger: GAAGGGAATGTTCTTGGCTCAGATCAACAAGTCCGA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACTCGCTGCATGTGCATaGTTCGGCTGCAGCGCCACA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLLAACA*FGCSAT
Trigger: TGTGGCGCTGCAGCCGAATCATGCACATGCAGCGAG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCTGAACCAGACCATCTaGTCGACGATGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLNQTI*STMPSR
Trigger: CCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTGAACCAGACCATCTaGTCGACGATGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLNQTI*STMPSR
Trigger: CCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCCTGTTGGAGCTGCCTaGGAACCTCTTCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGPVGAA*EPLHAN
Trigger: ATTGGCATGAAGAGGTTCTCAGGCAGCTCCAACAGG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACAACCCGGGGCACTGTaGAAAACAAGTGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKQPGAL*KTSASW
Trigger: CCAAGAGGCACTTGTTTTTCACAGTGCCCCGGGTTG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCAGAAATGTTGGGCGTaGGTCGAAATGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSQKCWA*VEMGQD
Trigger: GTCCTGTCCCATTTCGACTCACGCCCAACATTTCTG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCGGTGACGGCTTTCTaGACCAGGGACACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLAVTAF*TRDTSC
Trigger: GCAACTGGTGTCCCTGGTTCAGAAAGCCGTCACCGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAGAGAAAAACCAGCATaGTGGGTTCATCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRREKPA*WVHQLL
Trigger: CAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTCATGGCCTCCCCTGTaGTCACAGCAGCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSWPPL*SQQHCA
Trigger: GGCACAGTGCTGCTGTGATCACAGGGGAGGCCATGA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACCACCAGCTGCCAGATaGGCACGCAATCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIPPAAR*ARNHSS
Trigger: TGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTGG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGGCAGGAGGTTCACTTaGGGCCAGGAGTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSGRRFT*GQEFES
Trigger: GCTCTCAAACTCCTGGCCTCAAGTGAACCTCCTGCC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTGTTGGGAATGAACTaGGCACCAGGTGCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLLGMN*APGALH
Trigger: ATGCAAAGCACCTGGTGCTCAGTTCATTCCCAACAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGACTGCTTGTTGGGAATaGACTGAGCACCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASTACWE*TEHQVL
Trigger: AAGCACCTGGTGCTCAGTTCATTCCCAACAAGCAGT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCTTCCGCAGTTGCTGTaGTGGTTTCTCCTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLPQLL*WFLLKK
Trigger: TTTCTTCAGGAGAAACCAGCACAGCAACTGCGGAAG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCTCCTTTCTGAGGTGTaGAGTCTCTGCTGGACAATT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLLSEV*SLCWTI
Trigger: AATTGTCCAGCAGAGACTGCACACCTCAGAAAGGAG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTACATGGTCTGGATGCTaGTGGGCAGGGACTCATCGT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGTWSGC*WAGTHR
Trigger: ACGATGAGTCCCTGCCCAGCAGCATCCAGACCATGT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCGCTCTTGGAACGGATaGAGTCCACCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGRSWNG*SPPGSA
Trigger: TGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGGTTCCTTGGCAGTCTaGGCGAGCTCCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYGSLAV*ASSIEL
Trigger: CAGCTCTATGGAGCTCGCGCAGACTGCCAAGGAACC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCTGAGACCCATTGAGTaGAGACACCAAGGGATCCAT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASLRPIE*RHQGIH
Trigger: ATGGATCCCTTGGTGTCTGCACTCAATGGGTCTCAG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTGCTGTCAGCAGGGTTaGGTAAGGTGCGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWCCQQG*VRCATE
Trigger: CTCTGTGGCGCACCTTACGCAACCCTGCTGACAGCA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAGGCCACGTGGGAGATaGTGTCAGCAGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPRPRGR*CQQGCV
Trigger: TACGCAACCCTGCTGACAGCATCTCCCACGTGGCCT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAGGCCACGTGGGAGATaGTGTCAGCAGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRPRGR*CQQGCV
Trigger: TACGCAACCCTGCTGACAGCATCTCCCACGTGGCCT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCGCCTGTCAGGGCCTaGTCAAAAGTCTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAPVRA*SKVFRA
Trigger: AGCCCGGAAGACTTTTGAGCAGGCCCTGACAGGCGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGACACTGCTGGGCGACTaGCACCATCGTATAGTGGCG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPTLLGD*HHRIVA
Trigger: CGCCACTATACGATGGTGGCAGTCGCCCAGCAGTGT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAAGAAAGGGCCACACTaGTGGGCGACTGCCACCATC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLKKGPH*WATATI
Trigger: GATGGTGGCAGTCGCCCAGCAGTGTGGCCCTTTCTT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAGAAAGGGCCACACTaGTGGGCGACTGCCACCATC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPKKGPH*WATATI
Trigger: GATGGTGGCAGTCGCCCAGCAGTGTGGCCCTTTCTT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCTGTGCTGGGCTGGCTaGCCACCTGGTAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLCWAG*PPGSKA
Trigger: TGCCTTGCTACCAGGTGGGCAGCCAGCCCAGCACAG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCTGTGCTGGGCTGGCTaGCCACCTGGTAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFLCWAG*PPGSKA
Trigger: TGCCTTGCTACCAGGTGGGCAGCCAGCCCAGCACAG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTCCAGCGTGGTCTTTaGCATAGCGACTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLQRGL*HSDCPI
Trigger: AATGGGGCAGTCGCTATGGCAAAGACCACGCTGGAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAACAGCTCCACTGTCTaGGAGGGATGTCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGNSSTV*EGCRVR
Trigger: CCTGACTCGACATCCCTCGCAGACAGTGGAGCTGTT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTCCGTAATTCCTTTTaGAGTAGTTCAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLRNSF*SSSAGS
Trigger: ACTGCCTGCTGAACTACTGCAAAAGGAATTACGGAG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGTGTCCGCTGTACTTaGAGGCTGGGTCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSVRCT*RLGPRR
Trigger: CCTGCGTGGACCCAGCCTGCAAGTACAGCGGACACT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAATTTGGCGATAATGTaGGCCAGGAGCAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGNLAIM*ARSKCP
Trigger: CGGACACTTGCTCCTGGCGCACATTATCGCCAAATT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATGTTGCACTATCAGGTaGAGAATGTGGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKCCTIR*RMWTSC
Trigger: GCAGCTGGTCCACATTCTGCACCTGATAGTGCAACA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCGCTCACCATGTGCTaGACCAAGTGGTGCCGTACC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSALTMC*TKWCRT
Trigger: GGTACGGCACCACTTGGTGCAGCACATGGTGAGCGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGATGGCGCTCACCATGTaGTGCACCAAGTGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWMALTM*CTKWCR
Trigger: ACGGCACCACTTGGTGCAGCACATGGTGAGCGCCAT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGTGAAGCCCAGCCTCTaGATGGCGCTCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSVKPSL*MALTMC
Trigger: GCACATGGTGAGCGCCATGCAGAGGCTGGGCTTCAC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGACAGTGTCTGTGTGCTaGTTGTCAATGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGTVSVC*LSMGLA
Trigger: CGCCAAGCCCATTGACAAGCAGCACACAGACACTGT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAGCTTGTCGAACCACTaGAGCTTGAGTTCGGACTTG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSLSNH*SLSSDL
Trigger: CAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCACTTCTAGGCCCGTaGAGATATTCCCATAGTTCA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCALLGP*RYSHSS
Trigger: TGAACTATGGGAATATCTGCACGGGCCTAGAAGTGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATGTTTCCACATGTCATaGAGGCGGCAATTCCACGCT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKCFHMS*RRQFHA
Trigger: AGCGTGGAATTGCCGCCTGCATGACATGTGGAAACA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGCTCTGTTGGGAAAATaGTCATCAGGCGCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASALLGK*SSGARE
Trigger: TTCTCTCGCGCCTGATGAGCATTTTCCCAACAGAGC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGACCTTTCCGACGGCTaGGTAGAGGCACTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLDLSDG*VEALQL
Trigger: GAGCTGGAGTGCCTCTACGCAGCCGTCGGAAAGGTC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTCTTCCGCATCTCCATaGTCATCACTGCCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYSSASP*SSLPGA
Trigger: CGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCTTCCGCATCTCCATaGTCATCACTGCCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTISSASP*SSLPGA
Trigger: CGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAACCTCGAAAAACTTTaGCCTGATGAGTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASNLEKL*PDEWLG
Trigger: GCCCAGCCACTCATCAGGGCAAAGTTTTTCGAGGTT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGGTGCCAATGGGGGTaGTCTTCTCACACACGGCCA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYWCQWG*SSHTRP
Trigger: TGGCCGTGTGTGAGAAGAGCACCCCCATTGGCACCA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCTCCTTGGCAGCTGGTaGCAATGGGGGTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPLLGSW*QWGCSS
Trigger: AGAAGAGCACCCCCATTGGCACCAGCTGCCAAGGAG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACGCTCCCGGGGCTCCTaGTTGACATGTGTGACCATG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLRSRGS*LTCVTM
Trigger: CATGGTCACACATGTCAAGCAGGAGCCCCGGGAGCG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCCCGCGAGTGCATGCTaGTGTCTGTCAGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSPASAC*CLSERI
Trigger: GATCCTCTCTGACAGACAGCAGCATGCACTCGCGGG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTATCTCACCCGCGAGTaGATGCTGCTGTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGYLTRE*MLLSVR
Trigger: TCTGACAGACAGCAGCATGCACTCGCGGGTGAGATA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTTTCAAAAGCCTGGTaGTCCAACATCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCFSKAW*SNISVD
Trigger: GTCCACGCTGATGTTGGAGCACCAGGCTTTTGAAAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTCCAGTATCTCCTGCTaGGGCGGGGTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSSISC*GGVMLS
Trigger: GGAGAGCATCACCCCGCCGCAGCAGGAGATACTGGA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATCCAGTATCTCCTGCTaGGGCGGGGTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSSSISC*GGVMLS
Trigger: GGAGAGCATCACCCCGCCGCAGCAGGAGATACTGGA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGAATCCAGTATCTCCTaGTGCGGCGGGGTGATGCTC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSESSIS*CGGVML
Trigger: GAGCATCACCCCGCCGCAGCAGGAGATACTGGATTC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCAGCTCACTTCCACCTaGACCAGCGCCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSQLTST*TSASFM
Trigger: CATGAAGGAGGCGCTGGTGCAGGTGGAAGTGAGCTG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACAGCTCACTTCCACCTaGACCAGCGCCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLQLTST*TSASFM
Trigger: CATGAAGGAGGCGCTGGTGCAGGTGGAAGTGAGCTG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATCGATGAAGCTGAGCTaGTGCTCCTCGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSSMKLS*CSSGWQ
Trigger: CTGCCACCCCGAGGAGCAGCAGCTCAGCTTCATCGA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGTAGGAGAGGCGTGTaGACGTGGGACACTACGTGG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLCRRGV*TWDTTW
Trigger: CCACGTAGTGTCCCACGTGCACACGCCTCTCCTACA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCACCGTCTTCATGTCGTaGAGGCTGTTGTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSTVFMS*RLLFLP
Trigger: GGGAAGGAACAACAGCCTGCACGACATGAAGACGGT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGCAGACACGCCCAGGTaGAGCTGCCGCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFADTPR*SCRSFT
Trigger: TGTGAAGGAGCGGCAGCTGCACCTGGGCGTGTCTGC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCACATGGGTGCTGTTaGTCTTATGGGCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPHGCC*SYGPWI
Trigger: GATCCAGGGCCCATAAGAGCAACAGCACCCATGTGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCAGCGCCACATGGGTaGTGTTGCTCTTATGGGCCC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAAPHG*CCSYGP
Trigger: GGGCCCATAAGAGCAACAGCACCCATGTGGCGCTGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCAGCGCCACATGGGTaGTGTTGCTCTTATGGGCCC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSAAPHG*CCSYGP
Trigger: GGGCCCATAAGAGCAACAGCACCCATGTGGCGCTGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGCTCTCGCTGCATGTaGATGATTCGGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSSRCM*MIRLQR
Trigger: GCGCTGCAGCCGAATCATGCACATGCAGCGAGAGCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGGTGGAGCTCTCGCTaGATGTGCATGATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWGWSSR*MCMIRL
Trigger: CAGCCGAATCATGCACATGCAGCGAGAGCTCCACCC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCAGAGACTCAGAGGCTaGGCTGGAGAACATGGTCGA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGQRLRG*AGEHGR
Trigger: TCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATCTGTGCCGAGAAATTaGTCAAGAACCGGCACTTTT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSVPRN*SRTGTF
Trigger: AAAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCGGTGTTGTGCTTCTaGACAATCTCTACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPAVLCF*TISTRG
Trigger: GCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGCGGTGTTGTGCTTCTaGACAATCTCTACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWAVLCF*TISTRG
Trigger: GCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGTACAGCCGCCGGGCTaGGGTGTTGTGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTVQPPG*GVVLLH
Trigger: GTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTAC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGGTTGTCATGCTCGATaGCCTTCTTGGCGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIGCHAR*PSWRSA
Trigger: AGCGCTGCGCCAAGAAGGGCATCGAGCATGACAACC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGGTTGTCATGCTCGATaGCCTTCTTGGCGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLGCHAR*PSWRSA
Trigger: AGCGCTGCGCCAAGAAGGGCATCGAGCATGACAACC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCATTGGGGAAGGTGTaGAGCGCCCACTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLALGKV*SAHSLS
Trigger: GCTCAAGGAGTGGGCGCTGCACACCTTCCCCAATGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCAGGGTGTTCACCTTaGTTTCCCCGCCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPGCSP*FPRLRT
Trigger: AGTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGATTGTCCAGGCTGTTTaGCGCGGCCACCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWIVQAV*RGHQGV
Trigger: AACACCCTGGTGGCCGCGGCAAACAGCCTGGACAAT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAACAAAAGCACGAAGCTaGTGTGAGGTGTTATTTCCG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKTKARS*CEVLFP
Trigger: CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTACAAAAGCACGAAGCTaGTGTGAGGTGTTATTTCCG +
Preference number: 4 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLTKARS*CEVLFP
Trigger: CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGT...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACAAAAGCACGAAGCTaGTGTGAGGTGTTATTTCCG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRTKARS*CEVLFP
Trigger: CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCACCCAGCAACACAACTaGGATCTCAAGCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSTQQHN*DLKLPR
Trigger: CCTTGGCAGCTTGAGATCGCAGTTGTGTTGCTGGGT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAAAGGGCATATTGTCTaGATGGTCTGGACCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKKGHIV*MVWTLL
Trigger: GAGGAGGGTCCAGACCATGCAGACAATATGCCCTTT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATCCTGTCTCAACATCTaGCTAGTACACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSCLNI*LVHSCC
Trigger: GCAGCAGCTGTGTACTAGGCAGATGTTGAGACAGGA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACCAATTGCGGAAACATaGCCTATCGGCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLPIAET*PIGPSP
Trigger: GGGGCTGGGGCCGATAGGGCATGTTTCCGCAATTGG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATTCATCAAAGTGGTCTaGTCAACCACCGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKFIKVV*STTVAP
Trigger: GGGGGCCACGGTGGTTGACCAGACCACTTTGATGAA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACCGCAGTTGCTGTGCTaGTTTCTCCTGAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKPQLLC*FLLKKL
Trigger: CAGTTTCTTCAGGAGAAACCAGCACAGCAACTGCGG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGATGCAAGGAATGAACTaGTTTCTCAGCTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRMQGMN*FLSSVV
Trigger: CACCACAGAGCTGAGAAACCAGTTCATTCCTTGCAT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGGAGCTTGCAGGACATaGTCTGGATGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPGACRT*SGCCWA
Trigger: TGCCCAGCAGCATCCAGACCATGTCCTGCAAGCTCC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGAGCTTGCAGGACATaGTCTGGATGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWGACRT*SGCCWA
Trigger: TGCCCAGCAGCATCCAGACCATGTCCTGCAAGCTCC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTCTCCTGCTCGCTCTTaGAACGGATGCAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSPARS*NGCSPP
Trigger: TGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCGACAGTCTGTGACTTaGAATGTCTGCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCRQSVT*NVCLSS
Trigger: GGAAGACAAGCAGACATTCCAAGTCACAGACTGTCG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAAAGGGCCACACTGCTaGGCGACTGCCACCATCGTA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIKGPHC*ATATIV
Trigger: TACGATGGTGGCAGTCGCCCAGCAGTGTGGCCCTTT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAAAGGGCCACACTGCTaGGCGACTGCCACCATCGTA +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSKGPHC*ATATIV
Trigger: TACGATGGTGGCAGTCGCCCAGCAGTGTGGCCCTTT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGAAACATGGCTGTGCTaGGCTGGCTGCCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQETWLC*AGCPPG
Trigger: ACCAGGTGGGCAGCCAGCCCAGCACAGCCATGTTTC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGAAAACAGGGGCAGCTaGCAGGCCCTCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLENRGS*QALSLE
Trigger: CTCCAAGGAGAGGGCCTGCCAGCTGCCCCTGTTTTC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATCGTGTGTCACATGGTaGAAAGACTTTTCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSCVTW*KDFSWA
Trigger: CGCCCAGGAAAAGTCTTTCCACCATGTGACACACGA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCCTCACAGTGGAGTTTaGAGAGGTGACTTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASPHSGV*RGDFSN
Trigger: GTTCGAGAAGTCACCTCTCCAAACTCCACTGTGAGG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGCCTGGGCTGCAACGTaGTACAGAACGTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSAWAAT*YRTCSP
Trigger: AGGGGAACACGTTCTGTACCACGTTGCAGCCCAGGC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAACATTCTGCTCCACTaGGGATCGTTCAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGNILLH*GSFSVA
Trigger: AGCCACACTGAACGATCCCCAGTGGAGCAGAATGTT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTTGATGGCCTGGAACTaGAGGTCCAGGCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSLMAWN*RSRRMV
Trigger: CACCATGCGCCTGGACCTCCAGTTCCAGGCCATCAA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTTGATGGCCTGGAACTaGAGGTCCAGGCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLMAWN*RSRRMV
Trigger: CACCATGCGCCTGGACCTCCAGTTCCAGGCCATCAA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCACACACGTCGCAACTaGCTCACCAGAGAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYHTRRN*LTRECW
Trigger: CCAGCACTCTCTGGTGAGCCAGTTGCGACGTGTGTG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTGCGGTGCCTCTCTTaGAAGTTCTCACTCACCCAC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLRCLS*KFSLTH
Trigger: GTGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTTGCGGTGCCTCTCTTaGAAGTTCTCACTCACCCAC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSLRCLS*KFSLTH
Trigger: GTGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATATCTCCTTCTGGATTaGGAGGTCCCAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGYLLLD*EVPRAA
Trigger: AGCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTGGGTTATCTCCTTCTaGATTGGGAGGTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASWVISF*IGRSQE
Trigger: CTCTTGGGACCTCCCAATCCAGAAGGAGATAACCCA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCTCCACCAGCAGCGTaGCGTACTGCAGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAPPAA*RTAAGR
Trigger: TCTACCTGCTGCAGTACGCCACGCTGCTGGTGGAGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCTGTACTTGCAGGCTaGGTCCACGCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLAVLAG*VHAGLG
Trigger: TCCAAGGCCTGCGTGGACCCAGCCTGCAAGTACAGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCTGAATCCGGCTGCTaGTCCTTGATCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGSESGC*SLILCS
Trigger: GCTGCAGAGGATCAAGGACCAGCAGCCGGATTCAGA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGCTCCAGGTAGCGACTaGCTCCTCCCAAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYAPGSD*LLPKTA
Trigger: TGCAGTCTTTGGGAGGAGCCAGTCGCTACCTGGAGC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGCTCCAGGTAGCGACTaGCTCCTCCCAAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIAPGSD*LLPKTA
Trigger: TGCAGTCTTTGGGAGGAGCCAGTCGCTACCTGGAGC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGCTTGTCAATGGGCTTaGCGAGGAGAGAGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKACQWA*RGESLL
Trigger: GAGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGCTTGTCAATGGGCTTaGCGAGGAGAGAGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGACQWA*RGESLL
Trigger: GAGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCTTGGGCCACATGTCTaGCCGCAACGCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSLGPHV*PQRSLQ
Trigger: CTGAAGACTGCGTTGCGGCCAGACATGTGGCCCAAG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGATAGTTCACTTGGTTTaGCTGCTCCACAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRIVHLV*LLHSHQ
Trigger: CTGATGACTGTGGAGCAGCCAAACCAAGTGAACTAT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAGGATGGCTGGGGACTaGAGGACAGTTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGRMAGD*RTVSRK
Trigger: CTTCCTGCTAACTGTCCTCCAGTCCCCAGCCATCCT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACGCGAGAGAAGGCTGTaGACGGCTCGCAACACCTTG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLRERRL*TARNTL
Trigger: CAAGGTGTTGCGAGCCGTCCACAGCCTTCTCTCGCG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCGCGAGAGAAGGCTGTaGACGGCTCGCAACACCTTG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRERRL*TARNTL
Trigger: CAAGGTGTTGCGAGCCGTCCACAGCCTTCTCTCGCG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAGTACTCGGCTCTGTTaGGAAAATGCTCATCAGGCG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASSTRLC*ENAHQA
Trigger: CGCCTGATGAGCATTTTCCCAACAGAGCCGAGTACT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAGGGTCCCGAAGAGCTaGGAGGGATTGGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPRVPKS*EGLALV
Trigger: CACCAATGCCAATCCCTCCCAGCTCTTCGGGACCCT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACGCTTGTACCTGAGGTaGCTTCGGTGCTTCCTGACG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIRLYLR*LRCFLT
Trigger: CGTCAGGAAGCACCGAAGCCACCTCAGGTACAAGCG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAGAAGTGGTTCCCCATaGCTTCCCAGTTCTGCGAAC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRSGSP*LPSSAN
Trigger: GTTCGCAGAACTGGGAAGCCATGGGGAACCACTTCT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGGAGCATGGCTCCTTaGCAGCTGGTGCCAATGGGG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGSMAP*QLVPMG
Trigger: CCCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCTACATCCTCCTCTTTaGACTCGCTGTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLHPPL*TRCSPA
Trigger: AGCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAACTTGTCGTGCCTGTTaGTTAGCATGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGTCRAC*LACAAG
Trigger: ACCAGCTGCACATGCTAACCAACAGGCACGACAAGT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGCCGCTGCACAGAAATaGACTTATCTCACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGAAAQK*TYLTRE
Trigger: CTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACCCTTTTCAAAAGCCTaGTGCTCCAACATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKPFSKA*CSNISV
Trigger: CACGCTGATGTTGGAGCACCAGGCTTTTGAAAAGGG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGAGCATCGAATCCAGTaGTCTTCCCAGAGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKEHRIQ*SSQSWY
Trigger: ATACCAGCTCTGGGAAGACCACTGGATTCGATGCTC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACTGGTTCAATTCCTTaGAGCATCGAATCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRTGSIP*SIESSG
Trigger: ACCACTGGATTCGATGCTCCAAGGAATTGAACCAGT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAACTGGTTCAATTCCTTaGAGCATCGAATCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKTGSIP*SIESSG
Trigger: ACCACTGGATTCGATGCTCCAAGGAATTGAACCAGT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGTCAGGGCTTCCCACTaGTTCAATTCCTTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGVRASH*FNSLEH
Trigger: ATGCTCCAAGGAATTGAACCAGTGGGAAGCCCTGAC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCATGGCAGTCCAGTTaGACACCCGCCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSWQSS*TPARRT
Trigger: AGTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACCAGCGCCTCCTTCATaGCAGTCCAGTTGGACACCC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQPAPPS*QSSWTP
Trigger: GGGTGTCCAACTGGACTGCCATGAAGGAGGCGCTGG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCCCAGCGCCTCCTTCATaGCAGTCCAGTTGGACACCC +
Preference number: 4 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSPAPPS*QSSWTP
Trigger: GGGTGTCCAACTGGACTGCCATGAAGGAGGCGCTGG...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGAGGCGTGTGCACGTaGGACACTACGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFRGVCT*DTTWGS
Trigger: GCTGCCCCACGTAGTGTCCCACGTGCACACGCCTCT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAATTTGTGCAGCTTCCTaGAGTTCGATGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKICAAS*SSMICW
Trigger: CCAGCAAATCATCGAACTCCAGGAAGCTGCACAAAT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGATTTGTGCAGCTTCCTaGAGTTCGATGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRICAAS*SSMICW
Trigger: CCAGCAAATCATCGAACTCCAGGAAGCTGCACAAAT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAGTCGTCAGACACGATaGGCAGTCGGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYSRQTR*AVGSSR
Trigger: CCTGGAGGAACCGACTGCCCATCGTGTCTGACGACT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGTCGTCAGACACGATaGGCAGTCGGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSRQTR*AVGSSR
Trigger: CCTGGAGGAACCGACTGCCCATCGTGTCTGACGACT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAGTCGTCAGACACGATaGGCAGTCGGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWSRQTR*AVGSSR
Trigger: CCTGGAGGAACCGACTGCCCATCGTGTCTGACGACT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAGTCGTCAGACACGATaGGCAGTCGGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTISRQTR*AVGSSR
Trigger: CCTGGAGGAACCGACTGCCCATCGTGTCTGACGACT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCGATTTTTCCATACTaGATGATCGCTGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTAIFPY*MIAEAD
Trigger: ATCAGCTTCAGCGATCATCCAGTATGGAAAAATCGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCCACGATAGGAACAGTTaGAATAGTATGAATCCGACT +
Preference number: 4 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPHDRNS*NSMNPT
Trigger: AGTCGGATTCATACTATTCCAACTGTTCCTATCGTG...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAAAGCCACAGCACCTTaGCTAAGTATTTCCTCGATT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTKATAP*LSISSI
Trigger: AATCGAGGAAATACTTAGCCAAGGTGCTGTGGCTTT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATATCCAGGCCAGCCACTaGATGGGTGGCACACCAATG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYIQASH*MGGTPM
Trigger: CATTGGTGTGCCACCCATCCAGTGGCTGGCCTGGAT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGGTACAGGGTCCGGATaGGAAAGTAGACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIGTGSG*ESRPLG
Trigger: CCCAAGCGGTCTACTTTCCCATCCGGACCCTGTACC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGGTACAGGGTCCGGATaGGAAAGTAGACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYGTGSG*ESRPLG
Trigger: CCCAAGCGGTCTACTTTCCCATCCGGACCCTGTACC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTGCAGCGCCACATaGGTGCTGTTGCTCTTATGG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWGCSAT*VLLLLW
Trigger: CCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCACATGGTCGAGACGTTaGACACATTCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSTWSRR*THSPGP
Trigger: TGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCACTCAGAGGCTGCGCTaGAGAACATGGTCGAGACGT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGTQRLR*RTWSRR
Trigger: ACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTATAATGCGTTGGCTTTaGCATCAGAAACTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCIMRWL*HQKLPR
Trigger: CCTGGGGAGTTTCTGATGCCAAAGCCAACGCATTAT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCTCGATGCCCTTCTTaGCGCAGCGCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLARCPS*RSAACR
Trigger: TCTACAAGCAGCGCTGCGCCAAGAAGGGCATCGAGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCATAGTAACGGGAGATaGGGTTGTCATGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASHSNGR*GCHARC
Trigger: GCATCGAGCATGACAACCCCATCTCCCGTTACTATG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCATGTCGCGGAGGACCTaGTGGCTGGCTTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFMSRRT*WLAWVP
Trigger: GGGAACCCAAGCCAGCCACCAGGTCCTCCGCGACAT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAACGTCCAGTAGTCCGTaGCATTGGGGAAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKTSSSP*HWGRCA
Trigger: TGCACACCTTCCCCAATGCCACGGACTACTGGACGT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCCTATCAGAGCCAGCTaGATGGTGAACATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGPIRAS*MVNIFR
Trigger: CCGGAAGATGTTCACCATCCAGCTGGCTCTGATAGG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTATGGGACAGGACGGTTaGCATCCAGGTCTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSMGQDG*HPGLQS
Trigger: CGACTGGAGACCTGGATGCCAACCGTCCTGTCCCAT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAATGGGACAGGACGGTTaGCATCCAGGTCTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLMGQDG*HPGLQS
Trigger: CGACTGGAGACCTGGATGCCAACCGTCCTGTCCCAT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAATGGGACAGGACGGTTaGCATCCAGGTCTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIMGQDG*HPGLQS
Trigger: CGACTGGAGACCTGGATGCCAACCGTCCTGTCCCAT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGGGCGTGAGTCGAAATaGGACAGGACGGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYGRESK*DRTVGI
Trigger: GATGCCAACCGTCCTGTCCCATTTCGACTCACGCCC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCGGAGACCCCGATGGTaGTCAGAAACTCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASRRPRW*SETQKC
Trigger: ACATTTCTGAGTTTCTGACCACCATCGGGGTCTCCG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGGCCGGAGACCCCGATaGTGGTCAGAAACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGGRRPR*WSETQK
Trigger: TTTCTGAGTTTCTGACCACCATCGGGGTCTCCGGCC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAACCTTAAAGTTTGGCTaGGCGAAGCACCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTITLKFG*AKHRAT
Trigger: GGTCGCCCGGTGCTTCGCCCAGCCAAACTTTAAGGT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAATCCACCTTAAAGTTTaGCTGGGCGAAGCACCGGGC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKIHLKV*LGEAPG
Trigger: GCCCGGTGCTTCGCCCAGCCAAACTTTAAGGTGGAT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCATCCACCTTAAAGTTTaGCTGGGCGAAGCACCGGGC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGIHLKV*LGEAPG
Trigger: GCCCGGTGCTTCGCCCAGCCAAACTTTAAGGTGGAT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCCCACTGAATCCGAAGTaGATGCGTGTGGCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSPLNPK*MRVALP
Trigger: CGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCATTTGACCCTGTGGTaGGATTTGGGTAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCHLTLW*DLGKLS
Trigger: GCTGAGTTTACCCAAATCCCACCACAGGGTCAAATG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCAGCTGCTCCAGGCCTaGGACAAGCTTCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWQLLQA*DKLLTF
Trigger: GAAGGTGAGAAGCTTGTCCCAGGCCTGGAGCAGCTG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGGCATATTGTCTGCATaGTCTGGACCCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGGILSA*SGPSSL
Trigger: GAGTGAGGAGGGTCCAGACCATGCAGACAATATGCC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGCAACATCGTGCGGTaGTTCTGGCAAGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSNIVR*FWQAVE
Trigger: CTCCACCGCTTGCCAGAACCACCGCACGATGTTGCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGTCCTGGAGAGACCCTaGGACGTGCCGTTATTCATG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGVLERP*DVPLFM
Trigger: CATGAATAACGGCACGTCCCAGGGTCTCTCCAGGAC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 72 bp AAGCTGCCAAGGGACATCTTGTCAAGGCCCTTTCATTaGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KLPRDILSRPFH*TLWWDLGKLSC
Trigger: ACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAAGATGTCCCTTGGCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCCTCACGCTCCGGGTTaGCTTTCACAGCAATCGTTG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSPHAPG*LSQQSL
Trigger: CAACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACCTCACGCTCCGGGTTaGCTTTCACAGCAATCGTTG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIPHAPG*LSQQSL
Trigger: CAACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACACTTTCAGAGAAAGTaGTCCCCTCGGAATGATGGA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGHFQRK*SPRNDG
Trigger: TCCATCATTCCGAGGGGATCACTTTCTCTGAAAGTG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTTCTCAGCTCTGTGGTaGGGATGTGTTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSFSALW*GCVWQQ
Trigger: TTGCTGCCAAACACATCCTCACCACAGAGCTGAGAA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCACGGCTCCAAGTTCTaGCTGAGGCTTACACTTCTT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGHGSKF*LRLTLL
Trigger: AAGAAGTGTAAGCCTCAGTCAGAACTTGGAGCCGTG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCACCAGGTGCTTTGCATaGTGTTATGCCCCACGTGAT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSTRCFA*CYAPRD
Trigger: ATCACGTGGGGCATAACATCATGCAAAGCACCTGGT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAGAGGCAAGAACTCCTaGTACAAGAGATCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKRGKNS*YKRSWL
Trigger: TAGCCACGATCTCTTGTATCAGGAGTTCTTGCCTCT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGCCGCACAGGGACGGTaGGACACAGCTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTAAQGR*DTAPQR
Trigger: TCTTTGTGGAGCTGTGTCTCACCGTCCCTGTGCGGC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCGGAAAACTCCACAGTaGTGCTGGGGCCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRKTPQ*CWGPEP
Trigger: AGGTTCAGGGCCCCAGCATCACTGTGGAGTTTTCCG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACCACCAGGAAGCATTTaGTCACTTCCCACGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQPPGSI*SLPTPA
Trigger: GGCAGGCGTGGGAAGTGATCAAATGCTTCCTGGTGG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACCACCAGGAAGCATTTaGTCACTTCCCACGCCTGCC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLPPGSI*SLPTPA
Trigger: GGCAGGCGTGGGAAGTGATCAAATGCTTCCTGGTGG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCAGTTAAGTCCATCATaGCAAAGAGAAGTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTQLSPS*QREVLS
Trigger: TGAAAGCACTTCTCTTTGTCATGATGGACTTAACTG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGTGTGGCTTCCATCATaGACAGCTCCACTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWVWLPS*TAPLSA
Trigger: CGCAGACAGTGGAGCTGTTCATGATGGAAGCCACAC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACGAAGTTGGGGTCGTTaGAGTCTACAAAGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGRSWGR*SLQSER
Trigger: TCTTTCGCTTTGTAGACTTCAACGACCCCAACTTCG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGCCTTGAGGAGACTATaGAAAACCTGCAGGACGATC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSALRRL*KTCRTI
Trigger: GATCGTCCTGCAGGTTTTTCATAGTCTCCTCAAGGC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGCCTTGAGGAGACTATaGAAAACCTGCAGGACGATC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGALRRL*KTCRTI
Trigger: GATCGTCCTGCAGGTTTTTCATAGTCTCCTCAAGGC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACCATTGCGTGAGCCTTaGGGAGACTATGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGPLREP*GDYEKP
Trigger: AGGTTTTTCATAGTCTCCTCAAGGCTCACGCAATGG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTAGGATGAGACAGAATTaGCTCCTTCTCCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCRMRQN*LLLHWN
Trigger: ATTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAATTCTTCCACGATTTTaGCCACAGCCCGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGILPRF*PQPGGF
Trigger: AAATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAAT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAATTCTTCCACGATTTTaGCCACAGCCCGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKILPRF*PQPGGF
Trigger: AAATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAAT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTTGGGGAGTTATTCTTaGCCCATTCTTCCACGATTT +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRLGSYS*PILPRF
Trigger: AAATCGTGGAAGAATGGGTCAAGAATAACTCCCCAA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTTGGGCGTGCTGGTCTaGTCCCCAGGAGCTAGTTCG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLGVLV*SPGASS
Trigger: CGAACTAGCTCCTGGGGATCAGACCAGCACGCCCAA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCTGAACGAAAGCGCTaGGCAGCGCTCCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLAERKR*AALQSS
Trigger: TGAAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGAAATGTGGCACAGCTaGACGAAAGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYEMWHS*TKALSS
Trigger: GCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGAAATGTGGCACAGCTaGACGAAAGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWEMWHS*TKALSS
Trigger: GCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCCCGCTGCACCTGGTaGCTGCCGCTGCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSRCTW*LPLHRN
Trigger: ATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGGACGAGGTAGGGGTTaGTGTGGCCTTTGGACTGAC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSGRGRG*CGLWTD
Trigger: GTCAGTCCAAAGGCCACATCAACCCCTACCTCGTCC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATACTCGTTTTTGCCCATaGCGCCTGCCAGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYTRFCP*RLPAGG
Trigger: ACCTCCAGCTGGCAGGCGTCATGGGCAAAAACGAGT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATCGGACTTGTTGATCTaGGCCAAGAACATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSDLLI*AKNIPF
Trigger: GAAGGGAATGTTCTTGGCTCAGATCAACAAGTCCGA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCCTCCTCGGACTTGTTaGTCTGAGCCAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSPPRTC*SEPRTF
Trigger: GAATGTTCTTGGCTCAGATCAACAAGTCCGAGGAGG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAGTCAAAATCCGTCGTaGACTGGCCTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSQNPS*TGLSAS
Trigger: AGAAGCTGAAAGGCCAGTTCACGACGGATTTTGACT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAGGCGTCGTTCATaGCGAGGTATGGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWGRRRS*RGMGRS
Trigger: AGATCTACCCATACCTCGTCATGAACGACGCCTGCC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGGCAGGCGTCGTTCATaGCGAGGTATGGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLGRRRS*RGMGRS
Trigger: AGATCTACCCATACCTCGTCATGAACGACGCCTGCC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCAACCCGGGGCACTGTaGAAAACAAGTGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWQPGAL*KTSASW
Trigger: CCAAGAGGCACTTGTTTTTCACAGTGCCCCGGGTTG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCAACCCGGGGCACTGTaGAAAACAAGTGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPQPGAL*KTSASW
Trigger: CCAAGAGGCACTTGTTTTTCACAGTGCCCCGGGTTG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCAACCCGGGGCACTGTaGAAAACAAGTGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSQPGAL*KTSASW
Trigger: CCAAGAGGCACTTGTTTTTCACAGTGCCCCGGGTTG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATACTCTGAACCTCCTTaGGGATGTCGCGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIYSEPP*GCRGGP
Trigger: AGGTCCTCCGCGACATCCTCAAGGAGGTTCAGAGTA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGAGCCAGCTGGATGGTaGACATCTTCCGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYEPAGW*TSSGTS
Trigger: GGACGTTCCGGAAGATGTTCACCATCCAGCTGGCTC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGAGCCAGCTGGATGGTaGACATCTTCCGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLEPAGW*TSSGTS
Trigger: GGACGTTCCGGAAGATGTTCACCATCCAGCTGGCTC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACTGGATGAAGGACAATaGGGAGGTAGAGCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKLDEGQ*GGRAGY
Trigger: GTACCCAGCTCTACCTCCTCATTGTCCTTCATCCAG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATCCCATTCTCCAGTGTaGAAGACAAATGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSHSPV*KTNVPQ
Trigger: TTGGGGGACATTTGTCTTTCACACTGGAGAATGGGA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACAGACTCCAGATCCTTaGTCTTTCCACGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKQTPDP*SFHVEL
Trigger: GAGCTCCACGTGGAAAGATCAAGGATCTGGAGTCTG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CCTGCGGGTTTGCTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTGCATGCACCGGTTGGTTCTTTaGTACTCCTCACCGATGCAG +
Preference number: 4 (lower is better)
Translates to: PAGLLEMVFGEKGHIVCMHRLVL*YSSPMQ
Trigger: CTGCATCGGTGAGGAGTATCAAAGAACCAACCGGTG...CATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGCAAACCCGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGACTGCTTGTTGGGAATaGACTGAGCACCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGTACWE*TEHQVL
Trigger: AAGCACCTGGTGCTCAGTTCATTCCCAACAAGCAGT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCGCTCTTGGAACGGATaGAGTCCACCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRSWNG*SPPGSA
Trigger: TGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCGCTCTTGGAACGGATaGAGTCCACCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYRSWNG*SPPGSA
Trigger: TGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCGCTCTTGGAACGGATaGAGTCCACCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPRSWNG*SPPGSA
Trigger: TGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCCATTGCCACTCTCCTaGTCGCTCTTGGAACGGATG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSPLPLS*SLLERM
Trigger: CATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCTTCACCAGGTGCTTTaGATGATGTTATGCCCCACG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSLHQVL*MMLCPT
Trigger: CGTGGGGCATAACATCATGCAAAGCACCTGGTGAAG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCTGAGACCCATTGAGTaGAGACACCAAGGGATCCAT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLRPIE*RHQGIH
Trigger: ATGGATCCCTTGGTGTCTGCACTCAATGGGTCTCAG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATGCTGTCAGCAGGGTTaGGTAAGGTGCGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQCCQQG*VRCATE
Trigger: CTCTGTGGCGCACCTTACGCAACCCTGCTGACAGCA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGCTGGAGAGAAGCTTTaGAGTCGGAAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSAGEKL*SRKTPQ
Trigger: CTGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATGTAAAGTTGGGGTGTaGCAGGAGCTGGTAGAGTGC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKCKVGV*QELVEC
Trigger: GCACTCTACCAGCTCCTGGCACACCCCAACTTTACA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAACACTGCTGGGCGACTaGCACCATCGTATAGTGGCG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLTLLGD*HHRIVA
Trigger: CGCCACTATACGATGGTGGCAGTCGCCCAGCAGTGT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCTTTCAGGAATGTCTaGTGGTTCTGGAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGAFRNV*WFWRTQ
Trigger: TTGGGTTCTCCAGAACCAGCAGACATTCCTGAAAGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACACCGCATCAGAAGCTaGTCCAGCGTGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSHRIRS*SSVVFA
Trigger: GGCAAAGACCACGCTGGAGCAGCTTCTGATGCGGTG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAGCGAATGCATGGCCTaGTTCCTCACAGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSECMA*FLTVEF
Trigger: AAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGTGAAGAGCCTGGGCTaGAACGTGGTACAGAACGTG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSVKSLG*NVVQNV
Trigger: CACGTTCTGTACCACGTTGCAGCCCAGGCTCTTCAC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACAGGGCTTTGAAGAGTaGAGCGATGATTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKQGFEE*SDDFLP
Trigger: AGGGAGAAAATCATCGCTGCACTCTTCAAAGCCCTG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCCACTTCCATCCACTTaGGCAGATGTTGCATCATCT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASPLPST*ADVASS
Trigger: AGATGATGCAACATCTGCGCAAGTGGATGGAAGTGG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACTTCCAGTTGGTGGCTaGCATGTTCTCCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLPVGG*HVLLAV
Trigger: CACCGCAAGGAGAACATGGCAGCCACCAACTGGAAG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCAATTTGGCGATAATGTaGGCCAGGAGCAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSNLAIM*ARSKCP
Trigger: CGGACACTTGCTCCTGGCGCACATTATCGCCAAATT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCGCTCGAGCTTCCATTaGGTGAGCCTTGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRSSFH*VSLEET
Trigger: AGTCTCCTCAAGGCTCACGCAATGGAAGCTCGAGCG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCGCTCGAGCTTCCATTaGGTGAGCCTTGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSRSSFH*VSLEET
Trigger: AGTCTCCTCAAGGCTCACGCAATGGAAGCTCGAGCG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGTTGCACTATCAGGTaGAGAATGTGGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGCCTIR*RMWTSC
Trigger: GCAGCTGGTCCACATTCTGCACCTGATAGTGCAACA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGTTGCACTATCAGGTaGAGAATGTGGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSCCTIR*RMWTSC
Trigger: GCAGCTGGTCCACATTCTGCACCTGATAGTGCAACA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGCACTTCTAGGCCCGTaGAGATATTCCCATAGTTCA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASALLGP*RYSHSS
Trigger: TGAACTATGGGAATATCTGCACGGGCCTAGAAGTGC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATCCCGGACCATCTTCTaGAGGGAGCGCATAAAGACG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLSRTIF*RERIKT
Trigger: CGTCTTTATGCGCTCCCTGCAGAAGATGGTCCGGGA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTCCCGGACCATCTTCTaGAGGGAGCGCATAAAGACG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSRTIF*RERIKT
Trigger: CGTCTTTATGCGCTCCCTGCAGAAGATGGTCCGGGA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCTCCATGCTCATCACTaGCAGGCGCGTCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYLHAHH*QARLHQ
Trigger: CTGGTGAAGACGCGCCTGGCAGTGATGAGCATGGAG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCTTCCGCATCTCCATaGTCATCACTGCCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSSASP*SSLPGA
Trigger: CGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACTTTGGTTTTGGGCGTaGTGGTCTGATCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTILWFWA*WSDPQE
Trigger: CTCCTGGGGATCAGACCAGCACGCCCAAAACCAAAG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCTTTGGTTTTGGGCGTaGTGGTCTGATCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLWFWA*WSDPQE
Trigger: CTCCTGGGGATCAGACCAGCACGCCCAAAACCAAAG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACTTTGGTTTTGGGCGTaGTGGTCTGATCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLWFWA*WSDPQE
Trigger: CTCCTGGGGATCAGACCAGCACGCCCAAAACCAAAG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACTGTTGGTTAGCATGTaGAGCTGGTTTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGLLVSM*SWFPMS
Trigger: GGACATTGGAAACCAGCTGCACATGCTAACCAACAG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACCCGCGAGTGCATGCTaGTGTCTGTCAGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSPASAC*CLSERI
Trigger: GATCCTCTCTGACAGACAGCAGCATGCACTCGCGGG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATCACCCGCGAGTGCATaGTGCTGTCTGTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSSPASA*CCLSER
Trigger: CCTCTCTGACAGACAGCAGCATGCACTCGCGGGTGA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCTGCACCTGGTGACTaGCGCTGCACAGAAATGGAC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAAPGD*RCTEMD
Trigger: GTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCCAGTATCTCCTGCTaGGGCGGGGTGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSSISC*GGVMLS
Trigger: GGAGAGCATCACCCCGCCGCAGCAGGAGATACTGGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCGTGGTAGCCTGGAACTGGAGTTCGATGATTTaGTGGGCTGCCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: WWDLGKLSCNHHSVVAWNWSSMI*WAACRR
Trigger: TCTCCTACAGGCAGCCCAGCAAATCATCGAACTCCA...GTTCCAGGCTACCACGGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCACCGTCTTCATGTCGTaGAGGCTGTTGTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGTVFMS*RLLFLP
Trigger: GGGAAGGAACAACAGCCTGCACGACATGAAGACGGT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTTGCCCATGACGCCTaGCAGCTGGAGGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGFAHDA*QLEVAF
Trigger: AAATGCTACCTCCAGCTGGCAGGCGTCATGGGCAAA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGAACATTCCCTTCAGTaGATAAAATTCGGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTEHSLQ*IKFGCH
Trigger: ATGACAGCCGAATTTTATGCACTGAAGGGAATGTTC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAGTATTTCCTCGATTTaGTCTCGTTCTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASSISSI*SRSDAG
Trigger: GCCGGCATCAGAACGAGAGCAAATCGAGGAAATACT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGCTCTCGCTGCATGTaGATGATTCGGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSSRCM*MIRLQR
Trigger: GCGCTGCAGCCGAATCATGCACATGCAGCGAGAGCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGCTCTCGCTGCATGTaGATGATTCGGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSSRCM*MIRLQR
Trigger: GCGCTGCAGCCGAATCATGCACATGCAGCGAGAGCT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAGGCCCTGTTGGAGCTaGCTGAGAACCTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYRPCWS*LRTSSC
Trigger: GCATGAAGAGGTTCTCAGGCAGCTCCAACAGGGCCT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGGCCCACCCCAAACGTaGTCACCAACTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGGPPQT*SPTSSQ
Trigger: TTGTGAAGAAGTTGGTGAGCACGTTTGGGGTGGGCC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGGCCCACCCCAAACGTaGTCACCAACTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKGPPQT*SPTSSQ
Trigger: TTGTGAAGAAGTTGGTGAGCACGTTTGGGGTGGGCC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCAGAGACTCAGAGGCTaGGCTGGAGAACATGGTCGA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPQRLRG*AGEHGR
Trigger: TCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAAGAATTTGGGGAGTTaGTTGGTCTTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASKNLGS*LVLASK
Trigger: CTTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCGGTGTTGTGCTTCTaGACAATCTCTACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQAVLCF*TISTRG
Trigger: GCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACGGGCTGCGGTGTTGTaGTTCTGCACAATCTCTACC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLRAAVL*FCTIST
Trigger: GGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCATCTGTGGGGAAACTaGCACAACCCGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYHLWGN*HNPGHC
Trigger: ACAGTGCCCCGGGTTGTGGCAGTTTCCCCACAGATG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACATCTGTGGGGAAACTaGCACAACCCGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQHLWGN*HNPGHC
Trigger: ACAGTGCCCCGGGTTGTGGCAGTTTCCCCACAGATG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAACTGGGCGAGGTTGTaGAGGCGGGTCATGATGGCG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFNWARL*RRVMMA
Trigger: CGCCATCATGACCCGCCTGCACAACCTCGCCCAGTT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAATTGTCCAGGCTGTTTaGCGCGGCCACCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLIVQAV*RGHQGV
Trigger: AACACCCTGGTGGCCGCGGCAAACAGCCTGGACAAT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGAAGTCGTAAAAGCTaGGGGCTCAGAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRSRKS*GLRARS
Trigger: GCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGCACAGGAGCCGCCTaGAGACTCTCAGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSTGAA*RLSEFC
Trigger: ACAGAACTCTGAGAGTCTGCAGGCGGCTCCTGTGCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCCCACTGAACTTGGCTaGTGCTGTCCAGAATCGCTC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPPTELG*CCPESL
Trigger: GAGCGATTCTGGACAGCAGCAGCCAAGTTCAGTGGG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCGCCACCCACACATCTaGACAGACACCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPRHPHI*TDTRLH
Trigger: ATGAAGCCTGGTGTCTGTGCAGATGTGTGGGTGGCG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTAGTACACAGCTGCTaGTTTGCTTGGGAATCGACT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKLVHSC*FAWEST
Trigger: AGTCGATTCCCAAGCAAAGCAGCAGCTGTGTACTAG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTTCATCAAAGTGGTCTaGTCAACCACCGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWFIKVV*STTVAP
Trigger: GGGGGCCACGGTGGTTGACCAGACCACTTTGATGAA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCCGCAGTTGCTGTGCTaGTTTCTCCTGAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSPQLLC*FLLKKL
Trigger: CAGTTTCTTCAGGAGAAACCAGCACAGCAACTGCGG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCATCGTCGATGTTCTTaGCGAAGAGCTGGACGGCGA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWHRRCS*RRAGRR
Trigger: TCGCCGTCCAGCTCTTCGCCAAGAACATCGACGATG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACATCGTCGATGTTCTTaGCGAAGAGCTGGACGGCGA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLHRRCS*RRAGRR
Trigger: TCGCCGTCCAGCTCTTCGCCAAGAACATCGACGATG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCATCGTCGATGTTCTTaGCGAAGAGCTGGACGGCGA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPHRRCS*RRAGRR
Trigger: TCGCCGTCCAGCTCTTCGCCAAGAACATCGACGATG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTTGCAGGACATGGTCTaGATGCTGCTGGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYLQDMV*MLLGRD
Trigger: GTCCCTGCCCAGCAGCATCCAGACCATGTCCTGCAA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTCTCCTGCTCGCTCTTaGAACGGATGCAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWSPARS*NGCSPP
Trigger: TGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCGACAGTCTGTGACTTaGAATGTCTGCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASRQSVT*NVCLSS
Trigger: GGAAGACAAGCAGACATTCCAAGTCACAGACTGTCG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTGGAGAGCTCCACGTTaGAGCCCATTTCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYWRAPR*SPFLAG
Trigger: GCCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCCTTGCAGGAGGTTTaGAAGGAGAGGCAAGAACTC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPLQEV*KERQEL
Trigger: GAGTTCTTGCCTCTCCTTCCAAACCTCCTGCAAGGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACCAGAGCAGTTTCAATaGCCTTCTCCATGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKPEQFQ*PSPWGA
Trigger: AGCTCCCCATGGAGAAGGCCATTGAAACTGCTCTGG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAGTAGGGCTCAGTGTTaGCGCTTTTCAGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGSRAQC*RFSGSP
Trigger: TGGACTGCCTGAAAAGCGCCAACACTGAGCCCTACT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGAAAACAGGGGCAGCTaGCAGGCCCTCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFENRGS*QALSLE
Trigger: CTCCAAGGAGAGGGCCTGCCAGCTGCCCCTGTTTTC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCGTGTGTCACATGGTaGAAAGACTTTTCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSCVTW*KDFSWA
Trigger: CGCCCAGGAAAAGTCTTTCCACCATGTGACACACGA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTGCAGGACCTCTTTGTaGGGTTCCATGATCACCGTG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGCRTSL*GSMITV
Trigger: CACGGTGATCATGGAACCCCACAAAGAGGTCCTGCA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGCCAATCTGTGCGTTaGCAGGCTGGTGTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGQSVR*QAGVGA
Trigger: TGCTCCGACACCAGCCTGCCAACGCACAGATTGGCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCTCCTTCCAGTTGGTaGCTGCCATGTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPAPSSW*LPCSPC
Trigger: GCAAGGAGAACATGGCAGCCACCAACTGGAAGGAGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGGGCTCCTTCCAGTTaGTGGCTGCCATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIWAPSS*WLPCSP
Trigger: AGGAGAACATGGCAGCCACCAACTGGAAGGAGCCCA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGCTCCACCAGCAGCGTaGCGTACTGCAGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTAPPAA*RTAAGR
Trigger: TCTACCTGCTGCAGTACGCCACGCTGCTGGTGGAGC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGCTGTACTTGCAGGCTaGGTCCACGCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFAVLAG*VHAGLG
Trigger: TCCAAGGCCTGCGTGGACCCAGCCTGCAAGTACAGC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCATCTTCCGGGTCCAGTaGGTCAGCATCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFIFRVQ*VSIWCP
Trigger: CGGGCACCAGATGCTGACCCACTGGACCCGGAAGAT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGCCCAGCCTCTGCATaGCGCTCACCATGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSPASA*RSPCAA
Trigger: TGCAGCACATGGTGAGCGCCATGCAGAGGCTGGGCT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAAGCGTTTCACTTCCTaGGCAGAATCCACGGACAGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGKRFTS*AESTDR
Trigger: CCTGTCCGTGGATTCTGCCCAGGAAGTGAAACGCTT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCTTGGGCCACATGTCTaGCCGCAACGCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYLGPHV*PQRSLQ
Trigger: CTGAAGACTGCGTTGCGGCCAGACATGTGGCCCAAG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTATAGTTCACTTGGTTTaGCTGCTCCACAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCIVHLV*LLHSHQ
Trigger: CTGATGACTGTGGAGCAGCCAAACCAAGTGAACTAT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAGGATGGCTGGGGACTaGAGGACAGTTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLRMAGD*RTVSRK
Trigger: CTTCCTGCTAACTGTCCTCCAGTCCCCAGCCATCCT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAGTACTCGGCTCTGTTaGGAAAATGCTCATCAGGCG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSTRLC*ENAHQA
Trigger: CGCCTGATGAGCATTTTCCCAACAGAGCCGAGTACT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGAGCTGGGAGGGATTaGCATTGGTGGCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSRAGRD*HWWPSR
Trigger: ACGAGAAGGCCACCAATGCCAATCCCTCCCAGCTCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAGGGTCCCGAAGAGCTaGGAGGGATTGGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLRVPKS*EGLALV
Trigger: CACCAATGCCAATCCCTCCCAGCTCTTCGGGACCCT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCCTGTCTATGTAGCTaGGGTTGTTGCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLACLCS*GCCCRQ
Trigger: CTGCCTGCAGCAACAACCCCAGCTACATAGACAGGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCCTGTCTATGTAGCTaGGGTTGTTGCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPACLCS*GCCCRQ
Trigger: CTGCCTGCAGCAACAACCCCAGCTACATAGACAGGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAGACACGACGTTTCATaGAGTTGTCAAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRRHDVS*SCQKPR
Trigger: TCGAGGTTTTTGACAACTCCATGAAACGTCGTGTCT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATGCTTGATCCAGAAGTaGTTCCCCATGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKCLIQK*FPMASQ
Trigger: CTGGGAAGCCATGGGGAACCACTTCTGGATCAAGCA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTGCTTGATCCAGAAGTaGTTCCCCATGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGCLIQK*FPMASQ
Trigger: CTGGGAAGCCATGGGGAACCACTTCTGGATCAAGCA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGGCAGCTGGTGCCAATaGGGGTGCTCTTCTCACACA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQGSWCQ*GCSSHT
Trigger: TGTGTGAGAAGAGCACCCCCATTGGCACCAGCTGCC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAAAGTTCTTTGGTTTTaGGCGTGCTGGTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKKVLWF*ACWSDP
Trigger: GGGATCAGACCAGCACGCCCAAAACCAAAGAACTTT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAAAGTTCTTTGGTTTTaGGCGTGCTGGTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGKVLWF*ACWSDP
Trigger: GGGATCAGACCAGCACGCCCAAAACCAAAGAACTTT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTCTCTGCCAGCGTCGTaGAAATGTGGCACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSLPAS*KCGTAE
Trigger: TTCAGCTGTGCCACATTTCCACGACGCTGGCAGAGA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCTCCAACATCAGCGTaGACCGGAACCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLAPTSA*TGTRGC
Trigger: ACAACCTCTGGTTCCGGTCCACGCTGATGTTGGAGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATGGCAGTCCAGTTaGACACCCGCCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSWQSS*TPARRT
Trigger: AGTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCATGGCAGTCCAGTTaGACACCCGCCAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSWQSS*TPARRT
Trigger: AGTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAGTTCGATGATTTGCTaGGCTGCCTGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSSMIC*AACRRG
Trigger: GCCTCTCCTACAGGCAGCCCAGCAAATCATCGAACT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAGTTCGATGATTTGCTaGGCTGCCTGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSSMIC*AACRRG
Trigger: GCCTCTCCTACAGGCAGCCCAGCAAATCATCGAACT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTATTTGTGCAGCTTCCTaGAGTTCGATGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCICAAS*SSMICW
Trigger: CCAGCAAATCATCGAACTCCAGGAAGCTGCACAAAT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGCGATTTTTCCATACTaGATGATCGCTGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKAIFPY*MIAEAD
Trigger: ATCAGCTTCAGCGATCATCCAGTATGGAAAAATCGC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCAGCCACTGGATGGGTaGCACACCAATGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGQPLDG*HTNAVL
Trigger: AAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAATCCAGGCCAGCCACTaGATGGGTGGCACACCAATG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLIQASH*MGGTPM
Trigger: CATTGGTGTGCCACCCATCCAGTGGCTGGCCTGGAT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCTGCGCTGGAGAACATaGTCGAGACGTTGGACACAT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLRWRT*SRRWTH
Trigger: ATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTGCGCTGGAGAACATaGTCGAGACGTTGGACACAT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLRWRT*SRRWTH
Trigger: ATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGTTCATGACGAGGTATaGGTAGATCTTGCCATTGTG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCVHDEV*VDLAIV
Trigger: CACAATGGCAAGATCTACCCATACCTCGTCATGAAC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATACGTCCAGTAGTCCGTaGCATTGGGGAAGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYTSSSP*HWGRCA
Trigger: TGCACACCTTCCCCAATGCCACGGACTACTGGACGT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACCTATCAGAGCCAGCTaGATGGTGAACATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKPIRAS*MVNIFR
Trigger: CCGGAAGATGTTCACCATCCAGCTGGCTCTGATAGG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCTATCAGAGCCAGCTaGATGGTGAACATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPIRAS*MVNIFR
Trigger: CCGGAAGATGTTCACCATCCAGCTGGCTCTGATAGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGGCCGGAGACCCCGATaGTGGTCAGAAACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIGRRPR*WSETQK
Trigger: TTTCTGAGTTTCTGACCACCATCGGGGTCTCCGGCC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATACCTTAAAGTTTGGCTaGGCGAAGCACCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYTLKFG*AKHRAT
Trigger: GGTCGCCCGGTGCTTCGCCCAGCCAAACTTTAAGGT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCCAGACCGGAGAATCCTaGCTTCTTAAAAGATTATTT +
Preference number: 4 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPQTGES*LLKRLF
Trigger: AAATAATCTTTTAAGAAGCCAGGATTCTCCGGTCTG...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGGATCTGATGCAGAATaGGACTGGTTACCCACTGAA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKGSDAE*DWLPTE
Trigger: TTCAGTGGGTAACCAGTCCCATTCTGCATCAGATCC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCACTGCACCCAGCAGGGGTTGAACTTTTTAAGCCAATTGCGGAAACATGCCCTACGTGCCGTTATTCATaGTTAGCTCTGTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: PLHPAGVELFKPIAETCPTCRYS*LALFSV
Trigger: GACACTGAACAGAGCTAACCATGAATAACGGCACGT...AGGGCATGTTTCCGCAATTGGCTTAAAAAGTTCAACCCCTGCTGGGTGCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 72 bp GTTTGCTTGAAATGGTGTTTGGAGAAAAAGGGCATATaGTCTGCATGGTCTGGACCCTCCTCACTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VCLKWCLEKKGI*SAWSGPSSLWS
Trigger: GCTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
3UTR CAA 72 bp TCTCAACATCTGCCTAGTACACAGCTGCTGCTTTGCTaGGGAATCGACTTTTCACTGTTGTGTGTCGGGTAC +
Preference number: 4 (lower is better)
Translates to: SQHLPSTQLLLC*GIDFSLLCVGY
Trigger: GTACCCGACACACAACAGTGAAAAGTCGATTCCCAAGCAAAGCAGCAGCTGTGTACTAGGCAGATGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACTGAGGAGATGACGTaGCATTCTCAAAATTTTCAC +
Preference number: 4 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRTEEMT*HSQNFH
Trigger: GTGAAAATTTTGAGAATGTCACGTCATCTCCTCAGT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACCTCACGCTCCGGGTTaGCTTTCACAGCAATCGTTG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQPHAPG*LSQQSL
Trigger: CAACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGTGATCCCCTCGGAATaGTGGAATGTGTTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGVIPSE*WNVFES
Trigger: AGACTCGAACACATTCCATCATTCCGAGGGGATCAC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGTGATCCCCTCGGAATaGTGGAATGTGTTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKVIPSE*WNVFES
Trigger: AGACTCGAACACATTCCATCATTCCGAGGGGATCAC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGGCAATGGTGTTCATaGTCAAGGGCACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGWQWCS*SRAQTQ
Trigger: CTGAGTTTGTGCCCTTGATCATGAACACCATTGCCA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCCAAGTTCTGACTaGGGCTTACACTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCAPSSD*GLHFLK
Trigger: TTTTAAGAAGTGTAAGCCTCAGTCAGAACTTGGAGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCAGGGGTTCATCATTGTaGACACACCAGCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSRGSSL*THQRNA
Trigger: AGCATTTCGCTGGTGTGTTCACAATGATGAACCCCT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTTTGGAAGATTTCTTTaGACGTTAAGGGGTTCATCA +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTFGRFL*TLRGSS
Trigger: TGATGAACCCCTTAACGTTCAAAGAAATCTTCCAAA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGGCTGACCAATGTCTaGGACCCATTGAGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYWLTNV*DPLSAD
Trigger: GTCTGCACTCAATGGGTCTCAGACATTGGTCAGCCA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACCTTGGAGCCCAGGATaGTACTTGCAACATCAAATA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKPWSPG*YLQHQI
Trigger: TATTTGATGTTGCAAGTATCATCCTGGGCTCCAAGG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTGGGAAGAGCCTCGTaGCCGAAGTCAGGCGATTCA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLLGRAS*PKSGDS
Trigger: TGAATCGCCTGACTTCGGTCACGAGGCTCTTCCCAA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCCCGCTCCGTTTTCATaGCAACCTCTAGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWPAPFS*QPLAKA
Trigger: AGCCTTTGCTAGAGGTTGTCATGAAAACGGAGCGGG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGTCGAGTCAGGAACTTaGTCAGGGGCTCTCGGAATG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQVESGT*SGALGM
Trigger: CATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGAC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGCCTTGAGGAGACTATaGAAAACCTGCAGGACGATC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGALRRL*KTCRTI
Trigger: GATCGTCCTGCAGGTTTTTCATAGTCTCCTCAAGGC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCCATTGCGTGAGCCTTaGGGAGACTATGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSPLREP*GDYEKP
Trigger: AGGTTTTTCATAGTCTCCTCAAGGCTCACGCAATGG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCGGGTAGTACACCTTaGAGTGTTGCACTATCAGGT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPGSTP*SVALSG
Trigger: ACCTGATAGTGCAACACTTCAAGGTGTACTACCCGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCATTTGGGTCCATATCTaGATCCGGCTGCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGIWVHI*IRLLVL
Trigger: AAGGACCAGCAGCCGGATTCAGATATGGACCCAAAT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAGGATGAGACAGAATTaGCTCCTTCTCCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASRMRQN*LLLHWN
Trigger: ATTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGTGTTGTCATTAACCTaGCAGGCCACGCGGATAAGG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIVLSLT*QATRIR
Trigger: CCTTATCCGCGTGGCCTGTCAGGTTAATGACAACAC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTCAGGATGGCCTGGATaGAGTTCTTCCGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSGWPG*SSSASP
Trigger: TGGAGATGCGGAAGAACTTCATCCAGGCCATCCTGA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTGGTGATTTTTCGATaGGGGATGTCAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLVIFR*GMSGWP
Trigger: AGGCCATCCTGACATCCCTCATCGAAAAATCACCAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACTGGTGATTTTTCGATaGGGGATGTCAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKLVIFR*GMSGWP
Trigger: AGGCCATCCTGACATCCCTCATCGAAAAATCACCAG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCTCAATGCACTGCTTaGTCCAGAAGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPAQCTA*SRSGSP
Trigger: TGGGGAACCACTTCTGGATCAAGCAGTGCATTGAGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGCTGAACGAAAGCGCTaGGCAGCGCTCCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFAERKR*AALQSS
Trigger: TGAAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATGCTTCGGCTTAATCTaGAGACTCAGACCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGCFGLI*RLRPFS
Trigger: TGAAAAGGGTCTGAGTCTTCAGATTAAGCCGAAGCA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATGCTTCGGCTTAATCTaGAGACTCAGACCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKCFGLI*RLRPFS
Trigger: TGAAAAGGGTCTGAGTCTTCAGATTAAGCCGAAGCA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGACGAGGTAGGGGTTaGTGTGGCCTTTGGACTGAC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGRGRG*CGLWTD
Trigger: GTCAGTCCAAAGGCCACATCAACCCCTACCTCGTCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCTTCCTGGAGTTCGATaGTTTGCTGGGCTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLPGVR*FAGLPV
Trigger: TACAGGCAGCCCAGCAAATCATCGAACTCCAGGAAG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCTTCCTGGAGTTCGATaGTTTGCTGGGCTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPLPGVR*FAGLPV
Trigger: TACAGGCAGCCCAGCAAATCATCGAACTCCAGGAAG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTAAGCATAGCGTTATTTaGACTGGGATCATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCKHSVI*TGIMLR
Trigger: TCTCAGCATGATCCCAGTTCAAATAACGCTATGCTT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTATCCAGAGCTACATTaGCCAGTCCTTGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGYPELH*PVLVSG
Trigger: CCCGGAAACAAGGACTGGTCAATGTAGCTCTGGATA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACTGAACCAGACCATCTaGTCGACGATGCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLLNQTI*STMPSR
Trigger: CCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACCTGTTGGAGCTGCCTaGGAACCTCTTCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLPVGAA*EPLHAN
Trigger: ATTGGCATGAAGAGGTTCTCAGGCAGCTCCAACAGG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGGCAGGCGTCGTTCATaGCGAGGTATGGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQGRRRS*RGMGRS
Trigger: AGATCTACCCATACCTCGTCATGAACGACGCCTGCC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGGCAGGCGTCGTTCATaGCGAGGTATGGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSGRRRS*RGMGRS
Trigger: AGATCTACCCATACCTCGTCATGAACGACGCCTGCC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCTCCACAAGGGAAAGTaGAGAGGGGTTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYLHKGK*RGVVLH
Trigger: GTGGAGGACAACCCCTCTTCACTTTCCCTTGTGGAG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCAGAAATGTTGGGCGTaGGTCGAAATGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPQKCWA*VEMGQD
Trigger: GTCCTGTCCCATTTCGACTCACGCCCAACATTTCTG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTTTGTGCCAAGCAATaGTCTCGTCCCGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIFCAKQ*SRPGEP
Trigger: CGGTTCTCCGGGACGAGATCATTGCTTGGCACAAAA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAGAGAAAAACCAGCATaGTGGGTTCATCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASREKPA*WVHQLL
Trigger: CAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTCTGTCTTCACCCACTaGATCCGAAGTGGATGCGTG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSVFTH*IRSGCV
Trigger: CACGCATCCACTTCGGATTCAGTGGGTGAAGACAGA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTCTGTCTTCACCCACTaGATCCGAAGTGGATGCGTG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWSVFTH*IRSGCV
Trigger: CACGCATCCACTTCGGATTCAGTGGGTGAAGACAGA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGACTGGTTACCCACTaGACTTGGCTGCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGLVTH*TWLLLS
Trigger: GGACAGCAGCAGCCAAGTTCAGTGGGTAACCAGTCC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAACCTGCGGGTTTGCTTaGAATGGTGTTTGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKTCGFA*NGVWRK
Trigger: TTTTCTCCAAACACCATTTCAAGCAAACCCGCAGGT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGCAGGGCTATTCGATaGCGCGTCTATGTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGRAIR*RVYVRC
Trigger: ACAGCGCACATAGACGCGTCATCGAATAGCCCTGCC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAACTCCACATGTCCTTaGGTGTCCTGGAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWNSTCP*VSWRDP
Trigger: AGGGTCTCTCCAGGACACTCAAGGACATGTGGAGTT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAATAATGGGCAATTCTaGCAACACTTTCAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTNNGQF*QHFQRK
Trigger: CTTTCTCTGAAAGTGTTGGCAGAATTGCCCATTATT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGATGTTGCCTCGCTTGTaGAGACACCTGAATGGCAAT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGMLPRL*RHLNGN
Trigger: ATTGCCATTCAGGTGTCTGCACAAGCGAGGCAACAT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAACATGGTCTGGATGCTaGTGGGCAGGGACTCATCGT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLTWSGC*WAGTHR
Trigger: ACGATGAGTCCCTGCCCAGCAGCATCCAGACCATGT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACATGGTCTGGATGCTaGTGGGCAGGGACTCATCGT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSTWSGC*WAGTHR
Trigger: ACGATGAGTCCCTGCCCAGCAGCATCCAGACCATGT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGGACATGGTCTGGATaGTGCTGGGCAGGGACTCAT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRTWSG*CWAGTH
Trigger: ATGAGTCCCTGCCCAGCAGCATCCAGACCATGTCCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAGGACATGGTCTGGATaGTGCTGGGCAGGGACTCAT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLRTWSG*CWAGTH
Trigger: ATGAGTCCCTGCCCAGCAGCATCCAGACCATGTCCT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACCATTGCCACTCTCCTaGTCGCTCTTGGAACGGATG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLPLPLS*SLLERM
Trigger: CATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAAGAGGTCCTTCATGTaGTGCTTGTGCAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYKRSFM*CLCRPL
Trigger: GAGTGGCCTGCACAAGCAGCACATGAAGGACCTCTT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAAGAGGTCCTTCATGTaGTGCTTGTGCAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIKRSFM*CLCRPL
Trigger: GAGTGGCCTGCACAAGCAGCACATGAAGGACCTCTT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGGCCACGTGGGAGATaGTGTCAGCAGGGTTGCGTA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFRPRGR*CQQGCV
Trigger: TACGCAACCCTGCTGACAGCATCTCCCACGTGGCCT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGCATCTTCCTGTTACTaGCGCCAAACTTACCGAGCA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGASSCY*RQTYRA
Trigger: TGCTCGGTAAGTTTGGCGGCAGTAACAGGAAGATGC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGCTGGAGAGAAGCTTTaGAGTCGGAAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGAGEKL*SRKTPQ
Trigger: CTGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTACACTGCTGGGCGACTaGCACCATCGTATAGTGGCG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTTLLGD*HHRIVA
Trigger: CGCCACTATACGATGGTGGCAGTCGCCCAGCAGTGT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACTCCAGCGTGGTCTTTaGCATAGCGACTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSLQRGL*HSDCPI
Trigger: AATGGGGCAGTCGCTATGGCAAAGACCACGCTGGAG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAGCGAATGCATGGCCTaGTTCCTCACAGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSECMA*FLTVEF
Trigger: AAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAACACCTGCAGCGAATaGATGGCCTGCTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYNTCSE*MACFLT
Trigger: TGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCAGGGCTTTGAAGAGTaGAGCGATGATTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSQGFEE*SDDFLP
Trigger: AGGGAGAAAATCATCGCTGCACTCTTCAAAGCCCTG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAACAGCTCCACTGTCTaGGAGGGATGTCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYNSSTV*EGCRVR
Trigger: CCTGACTCGACATCCCTCGCAGACAGTGGAGCTGTT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGATGTTCTCCTTGCGGTaGCTCTCTTGGAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGMFSLR*LSWKFS
Trigger: TGAGAACTTCCAAGAGAGGCACCGCAAGGAGAACAT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTCCGTAATTCCTTTTaGAGTAGTTCAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKLRNSF*SSSAGS
Trigger: ACTGCCTGCTGAACTACTGCAAAAGGAATTACGGAG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGAGGTCCCAAGAGCTaGTCTCCTTCCCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGGPKS*SPSPFS
Trigger: TGAGAAGGGGGAAGGAGAGCAGCTCTTGGGACCTCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAATTTGGCGATAATGTaGGCCAGGAGCAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGNLAIM*ARSKCP
Trigger: CGGACACTTGCTCCTGGCGCACATTATCGCCAAATT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTACCACAGTGTCTGTGTaGTGCTTGTCAATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGTTVSV*CLSMGL
Trigger: CAAGCCCATTGACAAGCAGCACACAGACACTGTGGT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGCACTTCTAGGCCCGTaGAGATATTCCCATAGTTCA +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGALLGP*RYSHSS
Trigger: TGAACTATGGGAATATCTGCACGGGCCTAGAAGTGC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCGGCAATTCCACGCTaGAGAGGTTTGAAGCTACTG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLAAIPR*RGLKLL
Trigger: CAGTAGCTTCAAACCTCTGCAGCGTGGAATTGCCGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTGTTTCCACATGTCATaGAGGCGGCAATTCCACGCT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGCFHMS*RRQFHA
Trigger: AGCGTGGAATTGCCGCCTGCATGACATGTGGAAACA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATGTTTCCACATGTCATaGAGGCGGCAATTCCACGCT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKCFHMS*RRQFHA
Trigger: AGCGTGGAATTGCCGCCTGCATGACATGTGGAAACA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATCCCGGACCATCTTCTaGAGGGAGCGCATAAAGACG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSRTIF*RERIKT
Trigger: CGTCTTTATGCGCTCCCTGCAGAAGATGGTCCGGGA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAACCTCGAAAAACTTTaGCCTGATGAGTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGNLEKL*PDEWLG
Trigger: GCCCAGCCACTCATCAGGGCAAAGTTTTTCGAGGTT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCAGCAGCTCAATGCACTaGTTGATCCAGAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSSSSMH*LIQKWF
Trigger: GAACCACTTCTGGATCAAGCAGTGCATTGAGCTGCT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCTCCTTGGCAGCTGGTaGCAATGGGGGTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFLLGSW*QWGCSS
Trigger: AGAAGAGCACCCCCATTGGCACCAGCTGCCAAGGAG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCTGTTGGTTAGCATGTaGAGCTGGTTTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSLLVSM*SWFPMS
Trigger: GGACATTGGAAACCAGCTGCACATGCTAACCAACAG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGACCCACGTCTTCTCTaGCAGCGTCGTGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSDPRLL*QRRGNV
Trigger: CACATTTCCACGACGCTGGCAGAGAAGACGTGGGTC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGACCCACGTCTTCTCTaGCAGCGTCGTGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLDPRLL*QRRGNV
Trigger: CACATTTCCACGACGCTGGCAGAGAAGACGTGGGTC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGACCCACGTCTTCTCTaGCAGCGTCGTGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYDPRLL*QRRGNV
Trigger: CACATTTCCACGACGCTGGCAGAGAAGACGTGGGTC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCACCCGCGAGTGCATaGTGCTGTCTGTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSPASA*CCLSER
Trigger: CCTCTCTGACAGACAGCAGCATGCACTCGCGGGTGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTTTCAAAAGCCTGGTaGTCCAACATCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGFSKAW*SNISVD
Trigger: GTCCACGCTGATGTTGGAGCACCAGGCTTTTGAAAA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATACTTGCACCGCTTCTaGCACAGACCAGCCCACATA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIYLHRF*HRPAHI
Trigger: TATGTGGGCTGGTCTGTGGCAGAAGCGGTGCAAGTA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACTGTCTCCGAGTACTTaGACCGCTTCTGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSLSPST*TASATD
Trigger: GTCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGCCTGCGTTGATTTGTaGAGCTTCCTGGAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKACVDL*SFLEFD
Trigger: ATCGAACTCCAGGAAGCTGCACAAATCAACGCAGGC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAACCGTCTTCATGTCGTaGAGGCTGTTGTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTITVFMS*RLLFLP
Trigger: GGGAAGGAACAACAGCCTGCACGACATGAAGACGGT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAGCACATCGTGCATCTaGACAGCTGCAGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLSTSCI*TAAEKA
Trigger: AGCCTTCTCTGCAGCTGTGCAGATGCACGATGTGCT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTTCACCAGCACATCGTaGATCTGCACAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYFTSTS*ICTAAE
Trigger: CTCTGCAGCTGTGCAGATGCACGATGTGCTGGTGAA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTCACCAGCACATCGTaGATCTGCACAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIFTSTS*ICTAAE
Trigger: CTCTGCAGCTGTGCAGATGCACGATGTGCTGGTGAA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGTGGCACACCAATaGAGTACTTGTCGACGGCAT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLWVAHQ*STCRRH
Trigger: ATGCCGTCGACAAGTACTGCATTGGTGTGCCACCCA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGGCCCTGTTGGAGCTaGCTGAGAACCTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRPCWS*LRTSSC
Trigger: GCATGAAGAGGTTCTCAGGCAGCTCCAACAGGGCCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGGCCCACCCCAAACGTaGTCACCAACTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIGPPQT*SPTSSQ
Trigger: TTGTGAAGAAGTTGGTGAGCACGTTTGGGGTGGGCC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGGCCCACCCCAAACGTaGTCACCAACTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPGPPQT*SPTSSQ
Trigger: TTGTGAAGAAGTTGGTGAGCACGTTTGGGGTGGGCC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCACTTCAGCTGTCTGTaGCGAGAAATTGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASHFSCL*REIAQE
Trigger: TTCTTGAGCAATTTCTCGGCACAGACAGCTGAAGTG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACACTTCAGCTGTCTGTaGCGAGAAATTGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKHFSCL*REIAQE
Trigger: TTCTTGAGCAATTTCTCGGCACAGACAGCTGAAGTG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGGTATGGGTAGATCTTaGCATTGTGTCCCCGGATGT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGGMGRS*HCVPGC
Trigger: ACATCCGGGGACACAATGGCAAGATCTACCCATACC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTACCAGGGACACCAGTTaGTGGCTGTCCATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSTRDTS*WLSMFS
Trigger: AGAGAACATGGACAGCCAGCAACTGGTGTCCCTGGT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCCCAGGGTGTTCACCTTaGTTTCCCCGCCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSPGCSP*FPRLRT
Trigger: AGTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGG...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACCAGGGTGTTCACCTTaGTTTCCCCGCCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQPGCSP*FPRLRT
Trigger: AGTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTATTGTCCAGGCTGTTTaGCGCGGCCACCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTIVQAV*RGHQGV
Trigger: AACACCCTGGTGGCCGCGGCAAACAGCCTGGACAAT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCACAGGAGCCGCCTaGAGACTCTCAGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSSTGAA*RLSEFC
Trigger: ACAGAACTCTGAGAGTCTGCAGGCGGCTCCTGTGCT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCACTGAACTTGGCTGCTaGTGTCCAGAATCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGTELGC*CPESLL
Trigger: CAAGAGCGATTCTGGACAGCAGCAGCCAAGTTCAGT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACCCACTGAACTTGGCTaGTGCTGTCCAGAATCGCTC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQPTELG*CCPESL
Trigger: GAGCGATTCTGGACAGCAGCAGCCAAGTTCAGTGGG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGCGGACGGAAGCATGTaGCACAGGCCTCCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTADGSM*HRPPVC
Trigger: ACAAACAGGAGGCCTGTGGCACATGCTTCCGTCCGC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCACAATCGATGATGAATaGATGCCGGACCAGGTCGGT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGTIDDE*MPDQVG
Trigger: ACCGACCTGGTCCGGCATGCATTCATCATCGATTGT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359863.8
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGAGCACCAGGTGCTTTaGATGATGTTATGCCCCACG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWEHQVL*MMLCPT
Trigger: CGTGGGGCATAACATCATGCAAAGCACCTGGTGCTC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAATGCAAGGAATGAACTaGTTTCTCAGCTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGMQGMN*FLSSVV
Trigger: CACCACAGAGCTGAGAAACCAGTTCATTCCTTGCAT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACATCGTCGATGTTCTTaGCGAAGAGCTGGACGGCGA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSHRRCS*RRAGRR
Trigger: TCGCCGTCCAGCTCTTCGCCAAGAACATCGACGATG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACATCGTCGATGTTCTTaGCGAAGAGCTGGACGGCGA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQHRRCS*RRAGRR
Trigger: TCGCCGTCCAGCTCTTCGCCAAGAACATCGACGATG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGAGCTTGCAGGACATaGTCTGGATGCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGACRT*SGCCWA
Trigger: TGCCCAGCAGCATCCAGACCATGTCCTGCAAGCTCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCTCCTGCTCGCTCTTaGAACGGATGCAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSPARS*NGCSPP
Trigger: TGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCGACAGTCTGTGACTTaGAATGTCTGCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRQSVT*NVCLSS
Trigger: GGAAGACAAGCAGACATTCCAAGTCACAGACTGTCG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGGAGAGCTCCACGTTaGAGCCCATTTCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFWRAPR*SPFLAG
Trigger: GCCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGTTGTAGGGTTCCTTaGCAGTCTGCGCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSCRVP*QSARAP
Trigger: TGGAGCTCGCGCAGACTGCCAAGGAACCCTACAACT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTTCTCCATGGGGAGCTaGAGAGAAGCTTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPFSMGS*REALQS
Trigger: CGACTGCAAAGCTTCTCTCCAGCTCCCCATGGAGAA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTCTCCATGGGGAGCTaGAGAGAAGCTTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIFSMGS*REALQS
Trigger: CGACTGCAAAGCTTCTCTCCAGCTCCCCATGGAGAA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCTCACAGTGGAGTTTaGAGAGGTGACTTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPHSGV*RGDFSN
Trigger: GTTCGAGAAGTCACCTCTCCAAACTCCACTGTGAGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGCAGCGAATGCATaGCCTGCTTCCTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTPAANA*PASSQW
Trigger: CCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGCAGGACCTCTTTGTaGGGTTCCATGATCACCGTG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYCRTSL*GSMITV
Trigger: CACGGTGATCATGGAACCCCACAAAGAGGTCCTGCA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAATCATTGAAGGAATTTaGGAAGAGCCTCGTGACCGA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGIIEGI*EEPRDR
Trigger: TCGGTCACGAGGCTCTTCCCAAATTCCTTCAATGAT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAACATTCTGCTCCACTaGGGATCGTTCAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGNILLH*GSFSVA
Trigger: AGCCACACTGAACGATCCCCAGTGGAGCAGAATGTT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCATCCCGCAGAGGTCTaGCGTCTTTGTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASHPAEV*RLCVLK
Trigger: TTTTAAAACACAAAGACGCCAGACCTCTGCGGGATG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACATCCCGCAGAGGTCTaGCGTCTTTGTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGHPAEV*RLCVLK
Trigger: TTTTAAAACACAAAGACGCCAGACCTCTGCGGGATG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCACACACGTCGCAACTaGCTCACCAGAGAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTHTRRN*LTRECW
Trigger: CCAGCACTCTCTGGTGAGCCAGTTGCGACGTGTGTG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTTGCGGTGCCTCTCTTaGAAGTTCTCACTCACCCAC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSLRCLS*KFSLTH
Trigger: GTGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTTGCGGTGCCTCTCTTaGAAGTTCTCACTCACCCAC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPLRCLS*KFSLTH
Trigger: GTGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTGGGCTCCTTCCAGTTaGTGGCTGCCATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYWAPSS*WLPCSP
Trigger: AGGAGAACATGGCAGCCACCAACTGGAAGGAGCCCA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAAGGCTCGGAGCAGCTaGAACAGCAATTCTATATCT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKKARSS*NSNSIS
Trigger: AGATATAGAATTGCTGTTCCAGCTGCTCCGAGCCTT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAAGCGTTTCACTTCCTaGGCAGAATCCACGGACAGG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIKRFTS*AESTDR
Trigger: CCTGTCCGTGGATTCTGCCCAGGAAGTGAAACGCTT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAAGCGTTTCACTTCCTaGGCAGAATCCACGGACAGG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYKRFTS*AESTDR
Trigger: CCTGTCCGTGGATTCTGCCCAGGAAGTGAAACGCTT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTGTGCTGCTTGTCAATaGGCTTGGCGAGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWCAACQ*AWRGES
Trigger: ACTCTCTCCTCGCCAAGCCCATTGACAAGCAGCACA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAGTACTCGGCTCTGTTaGGAAAATGCTCATCAGGCG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSTRLC*ENAHQA
Trigger: CGCCTGATGAGCATTTTCCCAACAGAGCCGAGTACT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAATTTGGAGGCCACACTaGAAGTACTCGGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKIWRPH*KYSALL
Trigger: CAACAGAGCCGAGTACTTCCAGTGTGGCCTCCAAAT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGGGAGGGATTGGCATTaGTGGCCTTCTCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQGRDWH*WPSRSW
Trigger: CCAACTACGAGAAGGCCACCAATGCCAATCCCTCCC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGGGAGGGATTGGCATTaGTGGCCTTCTCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLGRDWH*WPSRSW
Trigger: CCAACTACGAGAAGGCCACCAATGCCAATCCCTCCC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGATGTCAGGATGGCCTaGATGAAGTTCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGDVRMA*MKFFRI
Trigger: GATGCGGAAGAACTTCATCCAGGCCATCCTGACATC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCTGATTGGCTGCCATTaGGGAGTTATTCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLIGCH*GVILDP
Trigger: TGGGTCAAGAATAACTCCCCAATGGCAGCCAATCAG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAGAAGTGGTTCCCCATaGCTTCCCAGTTCTGCGAAC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPRSGSP*LPSSAN
Trigger: GTTCGCAGAACTGGGAAGCCATGGGGAACCACTTCT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGCTTGATCCAGAAGTaGTTCCCCATGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTICLIQK*FPMASQ
Trigger: CTGGGAAGCCATGGGGAACCACTTCTGGATCAAGCA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGCTTGATCCAGAAGTaGTTCCCCATGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYCLIQK*FPMASQ
Trigger: CTGGGAAGCCATGGGGAACCACTTCTGGATCAAGCA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCTACATCCTCCTCTTTaGACTCGCTGTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLHPPL*TRCSPA
Trigger: AGCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCTACATCCTCCTCTTTaGACTCGCTGTTCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSLHPPL*TRCSPA
Trigger: AGCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATGGTTTTGGGCGTGCTaGTCTGATCCCCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSWFWAC*SDPQEL
Trigger: TAGCTCCTGGGGATCAGACCAGCACGCCCAAAACCA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATGGTTTTGGGCGTGCTaGTCTGATCCCCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLWFWAC*SDPQEL
Trigger: TAGCTCCTGGGGATCAGACCAGCACGCCCAAAACCA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAAAGTTCTTTGGTTTTaGGCGTGCTGGTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGKVLWF*ACWSDP
Trigger: GGGATCAGACCAGCACGCCCAAAACCAAAGAACTTT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAACTTGTCGTGCCTGTTaGTTAGCATGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKTCRAC*LACAAG
Trigger: ACCAGCTGCACATGCTAACCAACAGGCACGACAAGT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTCTCTGCCAGCGTCGTaGAAATGTGGCACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWSLPAS*KCGTAE
Trigger: TTCAGCTGTGCCACATTTCCACGACGCTGGCAGAGA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAATCTGGGGAAAAGCTaGACCCACGTCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTINLGKS*THVFSA
Trigger: GGCAGAGAAGACGTGGGTCCAGCTTTTCCCCAGATT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAATCTGGGGAAAAGCTaGACCCACGTCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPNLGKS*THVFSA
Trigger: GGCAGAGAAGACGTGGGTCCAGCTTTTCCCCAGATT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAATCTGGGGAAAAGCTaGACCCACGTCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWNLGKS*THVFSA
Trigger: GGCAGAGAAGACGTGGGTCCAGCTTTTCCCCAGATT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCCGCTGCACAGAAATaGACTTATCTCACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSAAAQK*TYLTRE
Trigger: CTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCCGCTGCACAGAAATaGACTTATCTCACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAAAQK*TYLTRE
Trigger: CTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATTGGCGGCACGCACTaGGACATGGCTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSIGGTH*DMASTK
Trigger: CTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAAT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCTCCAACATCAGCGTaGACCGGAACCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAPTSA*TGTRGC
Trigger: ACAACCTCTGGTTCCGGTCCACGCTGATGTTGGAGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTGTTCCTTCCCAGGTTaGTTGGCTGTAAGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPCSFPG*LAVSLR
Trigger: ACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGTCGTCAGACACGATaGGCAGTCGGTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSRQTR*AVGSSR
Trigger: CCTGGAGGAACCGACTGCCCATCGTGTCTGACGACT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCATCCAGGCCAGCCACTaGATGGGTGGCACACCAATG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFIQASH*MGGTPM
Trigger: CATTGGTGTGCCACCCATCCAGTGGCTGGCCTGGAT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGTACAGGGTCCGGATaGGAAAGTAGACCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGTGSG*ESRPLG
Trigger: CCCAAGCGGTCTACTTTCCCATCCGGACCCTGTACC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGACATGGTCGAGACGTTaGACACATTCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPTWSRR*THSPGP
Trigger: TGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTACATGGTCGAGACGTTaGACACATTCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSTWSRR*THSPGP
Trigger: TGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACTGCGCTGGAGAACATaGTCGAGACGTTGGACACAT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLRWRT*SRRWTH
Trigger: ATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCTGCGCTGGAGAACATaGTCGAGACGTTGGACACAT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPLRWRT*SRRWTH
Trigger: ATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAACTCAGAGGCTGCGCTaGAGAACATGGTCGAGACGT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQTQRLR*RTWSRR
Trigger: ACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGATGTAATAATGCGTTaGCTTTGGCATCAGAAACTC +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKDVIMR*LWHQKL
Trigger: GAGTTTCTGATGCCAAAGCCAACGCATTATTACATC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGCTCGATGCCCTTCTTaGCGCAGCGCTGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFARCPS*RSAACR
Trigger: TCTACAAGCAGCGCTGCGCCAAGAAGGGCATCGAGC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCCTATCAGAGCCAGCTaGATGGTGAACATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPPIRAS*MVNIFR
Trigger: CCGGAAGATGTTCACCATCCAGCTGGCTCTGATAGG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACCTATCAGAGCCAGCTaGATGGTGAACATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLPIRAS*MVNIFR
Trigger: CCGGAAGATGTTCACCATCCAGCTGGCTCTGATAGG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCATGGGACAGGACGGTTaGCATCCAGGTCTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFMGQDG*HPGLQS
Trigger: CGACTGGAGACCTGGATGCCAACCGTCCTGTCCCAT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGGCGTGAGTCGAAATaGGACAGGACGGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGRESK*DRTVGI
Trigger: GATGCCAACCGTCCTGTCCCATTTCGACTCACGCCC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACGGAGACCCCGATGGTaGTCAGAAACTCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKRRPRW*SETQKC
Trigger: ACATTTCTGAGTTTCTGACCACCATCGGGGTCTCCG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGGCCGGAGACCCCGATaGTGGTCAGAAACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSGRRPR*WSETQK
Trigger: TTTCTGAGTTTCTGACCACCATCGGGGTCTCCGGCC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAGGGACACCAGTTGCTaGCTGTCCATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLRDTSC*LSMFSG
Trigger: GCCAGAGAACATGGACAGCCAGCAACTGGTGTCCCT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGGGACACCAGTTGCTaGCTGTCCATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRDTSC*LSMFSG
Trigger: GCCAGAGAACATGGACAGCCAGCAACTGGTGTCCCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAGGAATGTAGAATACTaGGGAGATGACGTGACATTC +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGRNVEY*GDDVTF
Trigger: GAATGTCACGTCATCTCCTCAGTATTCTACATTCCT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGTGATCCCCTCGGAATaGTGGAATGTGTTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSVIPSE*WNVFES
Trigger: AGACTCGAACACATTCCATCATTCCGAGGGGATCAC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGTGATCCCCTCGGAATaGTGGAATGTGTTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPVIPSE*WNVFES
Trigger: AGACTCGAACACATTCCATCATTCCGAGGGGATCAC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTCAGAAGCTCCTTTCTaGGGTGTGCAGTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSEAPF*GVQSLL
Trigger: CAGCAGAGACTGCACACCTCAGAAAGGAGCTTCTGA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATCAGAAGCTCCTTTCTaGGGTGTGCAGTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSEAPF*GVQSLL
Trigger: CAGCAGAGACTGCACACCTCAGAAAGGAGCTTCTGA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTTCTCAGCTCTGTGGTaGGGATGTGTTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPFSALW*GCVWQQ
Trigger: TTGCTGCCAAACACATCCTCACCACAGAGCTGAGAA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATGTCCATGCAAGGAATaGACTGGTTTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKCPCKE*TGFSAL
Trigger: CAGAGCTGAGAAACCAGTTCATTCCTTGCATGGACA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCACGGCTCCAAGTTCTaGCTGAGGCTTACACTTCTT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYHGSKF*LRLTLL
Trigger: AAGAAGTGTAAGCCTCAGTCAGAACTTGGAGCCGTG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATACTGCTTGTTGGGAATaGACTGAGCTTCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYTACWE*TELHQV
Trigger: CACCTGGTGAAGCTCAGTTCATTCCCAACAAGCAGT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGACTGCTTGTTGGGAATaGACTGAGCTTCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPTACWE*TELHQV
Trigger: CACCTGGTGAAGCTCAGTTCATTCCCAACAAGCAGT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGATGTCTGAGACCCATTaGGTGCAGACACCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPMSETH*VQTPRD
Trigger: ATCCCTTGGTGTCTGCACTCAATGGGTCTCAGACAT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGGAGTTTGGAGAGGTaGCTTCTCGAACCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYWSLER*LLEPSR
Trigger: ACGACTTGGTTCGAGAAGTCACCTCTCCAAACTCCA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCAGCCGGGATCAGATaGAAAAGGTTTATAATTGCT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGAAGIR*KRFIIA
Trigger: AGCAATTATAAACCTTTTTCATCTGATCCCGGCTGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACCCGCTCCGTTTTCATaGCAACCTCTAGCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLPAPFS*QPLAKA
Trigger: AGCCTTTGCTAGAGGTTGTCATGAAAACGGAGCGGG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGTGTGGCTTCCATCATaGACAGCTCCACTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFVWLPS*TAPLSA
Trigger: CGCAGACAGTGGAGCTGTTCATGATGGAAGCCACAC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACCATTGCGTGAGCCTTaGGGAGACTATGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKPLREP*GDYEKP
Trigger: AGGTTTTTCATAGTCTCCTCAAGGCTCACGCAATGG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACCGGGTAGTACACCTTaGAGTGTTGCACTATCAGGT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIPGSTP*SVALSG
Trigger: ACCTGATAGTGCAACACTTCAAGGTGTACTACCCGG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGATTTGGGTCCATATCTaGATCCGGCTGCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPIWVHI*IRLLVL
Trigger: AAGGACCAGCAGCCGGATTCAGATATGGACCCAAAT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGTGTTGTCATTAACCTaGCAGGCCACGCGGATAAGG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLVLSLT*QATRIR
Trigger: CCTTATCCGCGTGGCCTGTCAGGTTAATGACAACAC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATCAGGATGGCCTGGATaGAGTTCTTCCGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSSGWPG*SSSASP
Trigger: TGGAGATGCGGAAGAACTTCATCCAGGCCATCCTGA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATCAGGATGGCCTGGATaGAGTTCTTCCGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSGWPG*SSSASP
Trigger: TGGAGATGCGGAAGAACTTCATCCAGGCCATCCTGA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACTGGTGATTTTTCGATaGGGGATGTCAGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTILVIFR*GMSGWP
Trigger: AGGCCATCCTGACATCCCTCATCGAAAAATCACCAG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTTGGGGAGTTATTCTTaGCCCATTCTTCCACGATTT +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASLGSYS*PILPRF
Trigger: AAATCGTGGAAGAATGGGTCAAGAATAACTCCCCAA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCTCAATGCACTGCTTaGTCCAGAAGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAQCTA*SRSGSP
Trigger: TGGGGAACCACTTCTGGATCAAGCAGTGCATTGAGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGAAATGTGGCACAGCTaGACGAAAGCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFEMWHS*TKALSS
Trigger: GCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGCTTCGGCTTAATCTaGAGACTCAGACCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSCFGLI*RLRPFS
Trigger: TGAAAAGGGTCTGAGTCTTCAGATTAAGCCGAAGCA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAAGCATAGCGTTATTTaGACTGGGATCATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKKHSVI*TGIMLR
Trigger: TCTCAGCATGATCCCAGTTCAAATAACGCTATGCTT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATATCCAGAGCTACATTaGCCAGTCCTTGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIYPELH*PVLVSG
Trigger: CCCGGAAACAAGGACTGGTCAATGTAGCTCTGGATA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCCTCCTCGGACTTGTTaGTCTGAGCCAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYPPRTC*SEPRTF
Trigger: GAATGTTCTTGGCTCAGATCAACAAGTCCGAGGAGG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACCTGTTGGAGCTGCCTaGGAACCTCTTCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSPVGAA*EPLHAN
Trigger: ATTGGCATGAAGAGGTTCTCAGGCAGCTCCAACAGG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTACTCTGAACCTCCTTaGGGATGTCGCGGAGGACCT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFYSEPP*GCRGGP
Trigger: AGGTCCTCCGCGACATCCTCAAGGAGGTTCAGAGTA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGGCACCATGTTACTCTaGACCTCCTTGAGGATGTCG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLGTMLL*TSLRMS
Trigger: CGACATCCTCAAGGAGGTTCAGAGTAACATGGTGCC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACAGAAATGTTGGGCGTaGGTCGAAATGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSQKCWA*VEMGQD
Trigger: GTCCTGTCCCATTTCGACTCACGCCCAACATTTCTG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACAGAAATGTTGGGCGTaGGTCGAAATGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLQKCWA*VEMGQD
Trigger: GTCCTGTCCCATTTCGACTCACGCCCAACATTTCTG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCAGAAATGTTGGGCGTaGGTCGAAATGGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYQKCWA*VEMGQD
Trigger: GTCCTGTCCCATTTCGACTCACGCCCAACATTTCTG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIITATQ*NYGASV
Trigger: CACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTAT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAGCACGAAGCTGCTGTaGGGTGTTATTTCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGSTKLL*GVISER
Trigger: TCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCGAAGAAGATGTTTCTaGCATCATGGCGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRRRCF*HHGVCS
Trigger: GGAGCACACGCCATGATGTCAGAAACATCTTCTTCG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCTAGGAGGCGCATCCTaGCGTGGGTTTATGCATTTT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLGGAS*RGFMHF
Trigger: AAAATGCATAAACCCACGTCAGGATGCGCCTCCTAG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGTTCATTTCCTCAAACTaGCAGAATGGAGACAAGGGA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASFISSN*QNGDKG
Trigger: TCCCTTGTCTCCATTCTGTCAGTTTGAGGAAATGAA...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359863.8
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGATGGCAGGCTCAAACTaGCAGAATGGAGACAAGGGA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWMAGSN*QNGDKG
Trigger: TCCCTTGTCTCCATTCTGTCAGTTTGAGCCTGCCAT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456197.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACTCCTTTCTGAGGTGTaGAGTCTCTGCTGGACAATT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKLLSEV*SLCWTI
Trigger: AATTGTCCAGCAGAGACTGCACACCTCAGAAAGGAG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATTGTCCTTTTCTCCTTaGTTCTCGAAGGGAGGCACG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLSFSP*FSKGGT
Trigger: CGTGCCTCCCTTCGAGAAGCAAGGAGAAAAGGACAA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCTTCACCAGGTGCTTTaGATGATGTTATGCCCCACG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPLHQVL*MMLCPT
Trigger: CGTGGGGCATAACATCATGCAAAGCACCTGGTGAAG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCATCTTCCTGTTACTaGCGCCAAACTTACCGAGCA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLASSCY*RQTYRA
Trigger: TGCTCGGTAAGTTTGGCGGCAGTAACAGGAAGATGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATGTAAAGTTGGGGTGTaGCAGGAGCTGGTAGAGTGC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSCKVGV*QELVEC
Trigger: GCACTCTACCAGCTCCTGGCACACCCCAACTTTACA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCATGACAAAGAGAAGTaGTTTCAGGAATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASHDKEK*FQECLL
Trigger: CAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGCGAATGCATGGCCTaGTTCCTCACAGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSECMA*FLTVEF
Trigger: AAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAACACCTGCAGCGAATaGATGGCCTGCTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLNTCSE*MACFLT
Trigger: TGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACAGGGCTTTGAAGAGTaGAGCGATGATTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKQGFEE*SDDFLP
Trigger: AGGGAGAAAATCATCGCTGCACTCTTCAAAGCCCTG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACCACTTCCATCCACTTaGGCAGATGTTGCATCATCT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKPLPST*ADVASS
Trigger: AGATGATGCAACATCTGCGCAAGTGGATGGAAGTGG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGCAGGATTCAAGATATaGTGCAGAACTTTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKAGFKI*CRTLAF
Trigger: AAAAGCTAAAGTTCTGCAGCATATCTTGAATCCTGC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTGTTGCACTATCAGGTaGAGAATGTGGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPCCTIR*RMWTSC
Trigger: GCAGCTGGTCCACATTCTGCACCTGATAGTGCAACA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGTTGCACTATCAGGTaGAGAATGTGGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYCCTIR*RMWTSC
Trigger: GCAGCTGGTCCACATTCTGCACCTGATAGTGCAACA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATACAGTGTCTGTGTGCTaGTTGTCAATGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYTVSVC*LSMGLA
Trigger: CGCCAAGCCCATTGACAAGCAGCACACAGACACTGT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAACCACAGTGTCTGTGTaGTGCTTGTCAATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTITTVSV*CLSMGL
Trigger: CAAGCCCATTGACAAGCAGCACACAGACACTGTGGT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAGCTTGTCGAACCACTaGAGCTTGAGTTCGGACTTG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLSLSNH*SLSSDL
Trigger: CAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCGGCAATTCCACGCTaGAGAGGTTTGAAGCTACTG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQAAIPR*RGLKLL
Trigger: CAGTAGCTTCAAACCTCTGCAGCGTGGAATTGCCGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGTTTCCACATGTCATaGAGGCGGCAATTCCACGCT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTICFHMS*RRQFHA
Trigger: AGCGTGGAATTGCCGCCTGCATGACATGTGGAAACA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCCCGGACCATCTTCTaGAGGGAGCGCATAAAGACG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSRTIF*RERIKT
Trigger: CGTCTTTATGCGCTCCCTGCAGAAGATGGTCCGGGA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCAGGTGTCTGATTGGCTaGCATTGGGGAGTTATTCTT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSRCLIG*HWGVIL
Trigger: AAGAATAACTCCCCAATGGCAGCCAATCAGACACCT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAACCTCGAAAAACTTTaGCCTGATGAGTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWNLEKL*PDEWLG
Trigger: GCCCAGCCACTCATCAGGGCAAAGTTTTTCGAGGTT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAGCAGCTCAATGCACTaGTTGATCCAGAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSSSMH*LIQKWF
Trigger: GAACCACTTCTGGATCAAGCAGTGCATTGAGCTGCT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCTTTGGTTTTGGGCGTaGTGGTCTGATCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLWFWA*WSDPQE
Trigger: CTCCTGGGGATCAGACCAGCACGCCCAAAACCAAAG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTGTTGGTTAGCATGTaGAGCTGGTTTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLLVSM*SWFPMS
Trigger: GGACATTGGAAACCAGCTGCACATGCTAACCAACAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTCCAGAAACTTGTCGTaGCTGTTGGTTAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSRNLS*LLVSMC
Trigger: GCACATGCTAACCAACAGGCACGACAAGTTTCTGGA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATATCTCACCCGCGAGTaGATGCTGCTGTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLYLTRE*MLLSVR
Trigger: TCTGACAGACAGCAGCATGCACTCGCGGGTGAGATA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTATCTCACCCGCGAGTaGATGCTGCTGTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYYLTRE*MLLSVR
Trigger: TCTGACAGACAGCAGCATGCACTCGCGGGTGAGATA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTGCGGGTTTGCTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTGCATGTTTTCAAAAGCCTGGTaGTCCAACATCAGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: PAGLLEMVFGEKGHIVCMFSKAW*SNISVD
Trigger: GTCCACGCTGATGTTGGAGCACCAGGCTTTTGAAAA...CATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGCAAACCCGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTTTGGCTTTATCCATTaGCTTTTCATAGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTFGFIH*LFIGFL
Trigger: CAAGAATCCTATGAAAAGGCAATGGATAAAGCCAAA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGGAGTTCGATGATTTaGTGGGCTGCCTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIWSSMI*WAACRR
Trigger: TCTCCTACAGGCAGCCCAGCAAATCATCGAACTCCA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCCTGCGTTGATTTGTaGAGCTTCCTGGAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLACVDL*SFLEFD
Trigger: ATCGAACTCCAGGAAGCTGCACAAATCAACGCAGGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGCCTGCGTTGATTTGTaGAGCTTCCTGGAGTTCGAT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYACVDL*SFLEFD
Trigger: ATCGAACTCCAGGAAGCTGCACAAATCAACGCAGGC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACCGTCTTCATGTCGTaGAGGCTGTTGTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSTVFMS*RLLFLP
Trigger: GGGAAGGAACAACAGCCTGCACGACATGAAGACGGT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTGCCCATGACGCCTaGCAGCTGGAGGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLFAHDA*QLEVAF
Trigger: AAATGCTACCTCCAGCTGGCAGGCGTCATGGGCAAA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCGTGGTAGCCTGGAACAGAGAAGGCTTTGTTTaGCTCCTCGGACTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: WWDLGKLSCNHHSVVAWNREGFV*LLGLVD
Trigger: ATCAACAAGTCCGAGGAGGCAAACAAAGCCTTCTCT...GTTCCAGGCTACCACGGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTTCACCAGCACATCGTaGATCTGCACAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYFTSTS*ICTAAE
Trigger: CTCTGCAGCTGTGCAGATGCACGATGTGCTGGTGAA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAGTATTTCCTCGATTTaGTCTCGTTCTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSISSI*SRSDAG
Trigger: GCCGGCATCAGAACGAGAGCAAATCGAGGAAATACT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCTTGTCGACGGCATCTaGCAAAGTGTTTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLVDGI*QSVFVI
Trigger: GATGACAAAAACACTTTGGCAGATGCCGTCGACAAG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCACATGGGTGCTGTTaGTCTTATGGGCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPHGCC*SYGPWI
Trigger: GATCCAGGGCCCATAAGAGCAACAGCACCCATGTGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCACATGGGTGCTGTTaGTCTTATGGGCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTPHGCC*SYGPWI
Trigger: GATCCAGGGCCCATAAGAGCAACAGCACCCATGTGG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCCATCTGATCGACGATaGCTTCCAGGGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYPSDRR*LPGKTE
Trigger: TTCTGTCTTCCCTGGAAGGCATCGTCGATCAGATGG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCAGAGACTCAGAGGCTaGGCTGGAGAACATGGTCGA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFQRLRG*AGEHGR
Trigger: TCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAAGAATTTGGGGAGTTaGTTGGTCTTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGKNLGS*LVLASK
Trigger: CTTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAAGAATTTGGGGAGTTaGTTGGTCTTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGKNLGS*LVLASK
Trigger: CTTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCCGGGGCATGAACCGTaGAATCTTGATGTAATAATG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSPGHEP*NLDVIM
Trigger: CATTATTACATCAAGATTGCACGGTTCATGCCCCGG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGGTATGGGTAGATCTTaGCATTGTGTCCCCGGATGT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIGMGRS*HCVPGC
Trigger: ACATCCGGGGACACAATGGCAAGATCTACCCATACC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTGAGTCTATTTAAATaGAGGACGAATTCCGCGAAG +
Preference number: 4 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLSLFK*RTNSAK
Trigger: CTTCGCGGAATTCGTCCTGCATTTAAATAGACTCAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAACCAGGGACACCAGTTaGTGGCTGTCCATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQTRDTS*WLSMFS
Trigger: AGAGAACATGGACAGCCAGCAACTGGTGTCCCTGGT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTACTGAACTTGGCTGCTaGTGTCCAGAATCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSTELGC*CPESLL
Trigger: CAAGAGCGATTCTGGACAGCAGCAGCCAAGTTCAGT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCCACTGAACTTGGCTaGTGCTGTCCAGAATCGCTC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPTELG*CCPESL
Trigger: GAGCGATTCTGGACAGCAGCAGCCAAGTTCAGTGGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GGAAACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTTTGAGATGGAGTCTCTaGCAAAATATTTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: GNMPYRPQPHLTLAEFSSLRWSL*QNIFVI
Trigger: GATGACAAAAATATTTTGGCAGAGACTCCATCTCAA...AGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAAGGCTTCAAGGCTTTaGAAGGTGACTGACGTGGAG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIKASRL*KVTDVE
Trigger: CTCCACGTCAGTCACCTTGCAAAGCCTTGAAGCCTT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGCCTAGTACACAGCTaGTGCTTTGCTTGGGAATCG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYCLVHS*CFAWES
Trigger: CGATTCCCAAGCAAAGCAGCAGCTGTGTACTAGGCA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCATACCAACCATTTCTaGGGGAGGCACTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPHTNHF*GRHCVL
Trigger: GAGAACACAGTGCCTCCCCCAGAAATGGTTGGTATG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTTCATTCTCACAGTCTaGCAGTTGGCCACACGGATG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPFILTV*QLATRM
Trigger: CATCCGTGTGGCCAACTGCCAGACTGTGAGAATGAA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGTTGGAGCCCATTTCTaGCAGGCGATCAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPVGAHF*QAIKEI
Trigger: TATCTCCTTGATCGCCTGCCAGAAATGGGCTCCAAC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGTTGTAGGGTTCCTTaGCAGTCTGCGCGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSCRVP*QSARAP
Trigger: TGGAGCTCGCGCAGACTGCCAAGGAACCCTACAACT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACCAGAGCAGTTTCAATaGCCTTCTCCATGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLPEQFQ*PSPWGA
Trigger: AGCTCCCCATGGAGAAGGCCATTGAAACTGCTCTGG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAAAAGTCTTCCGGGCTaGAGTGTCCTGGGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLKSLPG*SVLGFV
Trigger: TACAAAGCCCAGGACACTCCAGCCCGGAAGACTTTT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTTCAGGAATGTCTGCTaGTTCTGGAGAACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGFRNVC*FWRTQV
Trigger: CACTTGGGTTCTCCAGAACCAGCAGACATTCCTGAA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCCTCACAGTGGAGTTTaGAGAGGTGACTTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSPHSGV*RGDFSN
Trigger: GTTCGAGAAGTCACCTCTCCAAACTCCACTGTGAGG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACCTCACAGTGGAGTTTaGAGAGGTGACTTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLPHSGV*RGDFSN
Trigger: GTTCGAGAAGTCACCTCTCCAAACTCCACTGTGAGG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAACATTCTGCTCCACTaGGGATCGTTCAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLNILLH*GSFSVA
Trigger: AGCCACACTGAACGATCCCCAGTGGAGCAGAATGTT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAACATTCTGCTCCACTaGGGATCGTTCAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTINILLH*GSFSVA
Trigger: AGCCACACTGAACGATCCCCAGTGGAGCAGAATGTT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGTTATCTCCTTCTaGATTGGGAGGTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLWVISF*IGRSQE
Trigger: CTCTTGGGACCTCCCAATCCAGAAGGAGATAACCCA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAAGCGTTTCACTTCCTaGGCAGAATCCACGGACAGG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYKRFTS*AESTDR
Trigger: CCTGTCCGTGGATTCTGCCCAGGAAGTGAAACGCTT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGCTTGTCAATGGGCTTaGCGAGGAGAGAGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFACQWA*RGESLL
Trigger: GAGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATGTGCTGCTTGTCAATaGGCTTGGCGAGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQCAACQ*AWRGES
Trigger: ACTCTCTCCTCGCCAAGCCCATTGACAAGCAGCACA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTAGGATGGCTGGGGACTaGAGGACAGTTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTRMAGD*RTVSRK
Trigger: CTTCCTGCTAACTGTCCTCCAGTCCCCAGCCATCCT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGATTTGGAGGCCACACTaGAAGTACTCGGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPIWRPH*KYSALL
Trigger: CAACAGAGCCGAGTACTTCCAGTGTGGCCTCCAAAT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGGAGGGATTGGCATTaGTGGCCTTCTCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGRDWH*WPSRSW
Trigger: CCAACTACGAGAAGGCCACCAATGCCAATCCCTCCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGGAGGGATTGGCATTaGTGGCCTTCTCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGRDWH*WPSRSW
Trigger: CCAACTACGAGAAGGCCACCAATGCCAATCCCTCCC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTAGAGCTGGGAGGGATTaGCATTGGTGGCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTRAGRD*HWWPSR
Trigger: ACGAGAAGGCCACCAATGCCAATCCCTCCCAGCTCT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCAGCCCGGAGGATTTTaGCATCTGGTGATTTTTCGA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGQPGGF*HLVIFR
Trigger: TCGAAAAATCACCAGATGCCAAAATCCTCCGGGCTG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGAAGTGGTTCCCCATaGCTTCCCAGTTCTGCGAAC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSRSGSP*LPSSAN
Trigger: GTTCGCAGAACTGGGAAGCCATGGGGAACCACTTCT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGGTTTTGGGCGTGCTaGTCTGATCCCCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFWFWAC*SDPQEL
Trigger: TAGCTCCTGGGGATCAGACCAGCACGCCCAAAACCA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGTTAGCATGTGCAGCTaGTTTCCAATGTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKVSMCS*FPMSFS
Trigger: AGAAAAGGACATTGGAAACCAGCTGCACATGCTAAC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAACTTGTCGTGCCTGTTaGTTAGCATGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLTCRAC*LACAAG
Trigger: ACCAGCTGCACATGCTAACCAACAGGCACGACAAGT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGACTTGTCGTGCCTGTTaGTTAGCATGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWTCRAC*LACAAG
Trigger: ACCAGCTGCACATGCTAACCAACAGGCACGACAAGT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTCTCTGCCAGCGTCGTaGAAATGTGGCACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSLPAS*KCGTAE
Trigger: TTCAGCTGTGCCACATTTCCACGACGCTGGCAGAGA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAATCTGGGGAAAAGCTaGACCCACGTCTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSNLGKS*THVFSA
Trigger: GGCAGAGAAGACGTGGGTCCAGCTTTTCCCCAGATT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCACGCACTGGGACATaGCTTCCACAAAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQARTGT*LPQSSS
Trigger: TGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCACGCACTGGGACATaGCTTCCACAAAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYARTGT*LPQSSS
Trigger: TGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCATTGGCGGCACGCACTaGGACATGGCTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFIGGTH*DMASTK
Trigger: CTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAAT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGTTCGATGATTTGCTaGGCTGCCTGTAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSSMIC*AACRRG
Trigger: GCCTCTCCTACAGGCAGCCCAGCAAATCATCGAACT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGATTTGTGCAGCTTCCTaGAGTTCGATGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGICAAS*SSMICW
Trigger: CCAGCAAATCATCGAACTCCAGGAAGCTGCACAAAT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATGTTCCTTCCCAGGTTaGTTGGCTGTAAGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQCSFPG*LAVSLR
Trigger: ACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATGTTCCTTCCCAGGTTaGTTGGCTGTAAGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSCSFPG*LAVSLR
Trigger: ACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAAGATGCTGCTCCAGTaGGACAAGTCGTCAGACACG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLKMLLQ*DKSSDT
Trigger: CGTGTCTGACGACTTGTCCCACTGGAGCAGCATCTT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAAGATGCTGCTCCAGTaGGACAAGTCGTCAGACACG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQKMLLQ*DKSSDT
Trigger: CGTGTCTGACGACTTGTCCCACTGGAGCAGCATCTT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAAAGCCACAGCACCTTaGCTAAGTATTTCCTCGATT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGKATAP*LSISSI
Trigger: AATCGAGGAAATACTTAGCCAAGGTGCTGTGGCTTT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACAGCCACTGGATGGGTaGCACACCAATGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLQPLDG*HTNAVL
Trigger: AAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAACATGGTCGAGACGTTaGACACATTCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQTWSRR*THSPGP
Trigger: TGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACTGCGCTGGAGAACATaGTCGAGACGTTGGACACAT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLLRWRT*SRRWTH
Trigger: ATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCACTCAGAGGCTGCGCTaGAGAACATGGTCGAGACGT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFTQRLR*RTWSRR
Trigger: ACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATTTGGGGAGTTGCTTaGTCTTGGCCTCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSIWGVA*SWPPRF
Trigger: AAATCTTGGAGGCCAAGACCAAGCAACTCCCCAAAT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACATAGTAACGGGAGATaGGGTTGTCATGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIHSNGR*GCHARC
Trigger: GCATCGAGCATGACAACCCCATCTCCCGTTACTATG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACGGAGACCCCGATGGTaGTCAGAAACTCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIRRPRW*SETQKC
Trigger: ACATTTCTGAGTTTCTGACCACCATCGGGGTCTCCG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACAGACCGGAGAATCCTaGCTTCTTAAAAGATTATTT +
Preference number: 4 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKQTGES*LLKRLF
Trigger: AAATAATCTTTTAAGAAGCCAGGATTCTCCGGTCTG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACACTTTCAGAGAAAGTaGTCCCCTCGGAATGATGGA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLHFQRK*SPRNDG
Trigger: TCCATCATTCCGAGGGGATCACTTTCTCTGAAAGTG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCAATGGTGTTCATaGTCAAGGGCACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLWQWCS*SRAQTQ
Trigger: CTGAGTTTGTGCCCTTGATCATGAACACCATTGCCA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCTTGTGCAGACACCTaGATGGCAATGGTGTTCATG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQACADT*MAMVFM
Trigger: CATGAACACCATTGCCATTCAGGTGTCTGCACAAGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCTTGTGCAGACACCTaGATGGCAATGGTGTTCATG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLACADT*MAMVFM
Trigger: CATGAACACCATTGCCATTCAGGTGTCTGCACAAGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCAGAAGCTCCTTTCTaGGGTGTGCAGTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSEAPF*GVQSLL
Trigger: CAGCAGAGACTGCACACCTCAGAAAGGAGCTTCTGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGTCCATGCAAGGAATaGACTGGTTTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYCPCKE*TGFSAL
Trigger: CAGAGCTGAGAAACCAGTTCATTCCTTGCATGGACA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTGTCCATGCAAGGAATaGACTGGTTTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPCPCKE*TGFSAL
Trigger: CAGAGCTGAGAAACCAGTTCATTCCTTGCATGGACA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCAATTGTGTGGAATTTaGGAACGAAAACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSQLCGI*ERKPPA
Trigger: TGCTGGAGGTTTTCGTTCTCAAATTCCACACAATTG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACACGGCTCCAAGTTCTaGCTGAGGCTTACACTTCTT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQHGSKF*LRLTLL
Trigger: AAGAAGTGTAAGCCTCAGTCAGAACTTGGAGCCGTG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAACTTCGACAGTCTGTaGCTTGGAATGTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGNFDSL*LGMSAC
Trigger: ACAAGCAGACATTCCAAGTCACAGACTGTCGAAGTT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCACACACCAAGGTTTTaGCCAAACTTCGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYHTPRF*PNFDSL
Trigger: CAGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATACCAGGTGCTTTGCATaGTGTTATGCCCCACGTGAT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYTRCFA*CYAPRD
Trigger: ATCACGTGGGGCATAACATCATGCAAAGCACCTGGT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAACTGCTTGTTGGGAATaGACTGAGCTTCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLTACWE*TELHQV
Trigger: CACCTGGTGAAGCTCAGTTCATTCCCAACAAGCAGT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAGGGGTTCATCATTGTaGACACACCAGCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYRGSSL*THQRNA
Trigger: AGCATTTCGCTGGTGTGTTCACAATGATGAACCCCT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAGGGGTTCATCATTGTaGACACACCAGCGAAATGCT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRGSSL*THQRNA
Trigger: AGCATTTCGCTGGTGTGTTCACAATGATGAACCCCT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAATGTCTGAGACCCATTaGGTGCAGACACCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQMSETH*VQTPRD
Trigger: ATCCCTTGGTGTCTGCACTCAATGGGTCTCAGACAT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCAGTTAAGTCCATCATaGCAAAGAGAAGTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASQLSPS*QREVLS
Trigger: TGAAAGCACTTCTCTTTGTCATGATGGACTTAACTG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATGGAGTTTGGAGAGGTaGCTTCTCGAACCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSWSLER*LLEPSR
Trigger: ACGACTTGGTTCGAGAAGTCACCTCTCCAAACTCCA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGCAGCCGGGATCAGATaGAAAAGGTTTATAATTGCT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGAAGIR*KRFIIA
Trigger: AGCAATTATAAACCTTTTTCATCTGATCCCGGCTGC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCGAAGTTGGGGTCGTTaGAGTCTACAAAGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYRSWGR*SLQSER
Trigger: TCTTTCGCTTTGTAGACTTCAACGACCCCAACTTCG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCGAAGTTGGGGTCGTTaGAGTCTACAAAGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSRSWGR*SLQSER
Trigger: TCTTTCGCTTTGTAGACTTCAACGACCCCAACTTCG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGATTTTGGCATCTGGTaGTTTTTCGATGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGDFGIW*FFDEGC
Trigger: ACATCCCTCATCGAAAAATCACCAGATGCCAAAATC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAATTCTTCCACGATTTTaGCCACAGCCCGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLILPRF*PQPGGF
Trigger: AAATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAAT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTTGGGGAGTTATTCTTaGCCCATTCTTCCACGATTT +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSLGSYS*PILPRF
Trigger: AAATCGTGGAAGAATGGGTCAAGAATAACTCCCCAA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTGGGGAGTTATTCTTaGCCCATTCTTCCACGATTT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGLGSYS*PILPRF
Trigger: AAATCGTGGAAGAATGGGTCAAGAATAACTCCCCAA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCTTCCTGGAGTTCGATaGTTTGCTGGGCTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLPGVR*FAGLPV
Trigger: TACAGGCAGCCCAGCAAATCATCGAACTCCAGGAAG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCTGAAGCTGATGCATaGACCCCAAGCATAGCGTTA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSAEADA*TPSIAL
Trigger: TAACGCTATGCTTGGGGTTCATGCATCAGCTTCAGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTCGGACTTGTTGATCTaGGCCAAGAACATTCCCTTC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSDLLI*AKNIPF
Trigger: GAAGGGAATGTTCTTGGCTCAGATCAACAAGTCCGA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACCTCCTCGGACTTGTTaGTCTGAGCCAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSPPRTC*SEPRTF
Trigger: GAATGTTCTTGGCTCAGATCAACAAGTCCGAGGAGG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCTGTTGGAGCTGCCTaGGAACCTCTTCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPVGAA*EPLHAN
Trigger: ATTGGCATGAAGAGGTTCTCAGGCAGCTCCAACAGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATGGCCTTTCAGCTTCTaGAAGACAGGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLWPFSF*KTGSCA
Trigger: TGCACAAGACCCTGTCTTTCAGAAGCTGAAAGGCCA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATGGCCTTTCAGCTTCTaGAAGACAGGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSWPFSF*KTGSCA
Trigger: TGCACAAGACCCTGTCTTTCAGAAGCTGAAAGGCCA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAGTCAAAATCCGTCGTaGACTGGCCTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYSQNPS*TGLSAS
Trigger: AGAAGCTGAAAGGCCAGTTCACGACGGATTTTGACT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTTTTGTGCCAAGCAATaGTCTCGTCCCGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFFCAKQ*SRPGEP
Trigger: CGGTTCTCCGGGACGAGATCATTGCTTGGCACAAAA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAGCACGAAGCTGCTGTaGGGTGTTATTTCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSTKLL*GVISER
Trigger: TCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGCACGAAGCTGCTGTaGGGTGTTATTTCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSTKLL*GVISER
Trigger: TCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAGAGAAAAACCAGCATaGTGGGTTCATCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGREKPA*WVHQLL
Trigger: CAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCTGTCTTCACCCACTaGATCCGAAGTGGATGCGTG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSVFTH*IRSGCV
Trigger: CACGCATCCACTTCGGATTCAGTGGGTGAAGACAGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCAACTGGGAAGTAACTTaGGTCCAGTCAGACCGGCAA +
Preference number: 4 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSNWEVT*VQSDRQ
Trigger: TTGCCGGTCTGACTGGACTCAAGTTACTTCCCAGTT...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTTGTCCTTTTCTCCTTaGTTCTCGAAGGGAGGCACG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYLSFSP*FSKGGT
Trigger: CGTGCCTCCCTTCGAGAAGCAAGGAGAAAAGGACAA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAACACACCAGCGAAATaGTCCAATACCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLNTPAK*SNTSFS
Trigger: GGAGAAGGAGGTATTGGAGCATTTCGCTGGTGTGTT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAACACACCAGCGAAATaGTCCAATACCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSNTPAK*SNTSFS
Trigger: GGAGAAGGAGGTATTGGAGCATTTCGCTGGTGTGTT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACTGAGACCCATTGAGTaGAGACACCAAGGGATCCAT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLLRPIE*RHQGIH
Trigger: ATGGATCCCTTGGTGTCTGCACTCAATGGGTCTCAG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCATCTTCCTGTTACTaGCGCCAAACTTACCGAGCA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYASSCY*RQTYRA
Trigger: TGCTCGGTAAGTTTGGCGGCAGTAACAGGAAGATGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCTTTCAGGAATGTCTaGTGGTTCTGGAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPAFRNV*WFWRTQ
Trigger: TTGGGTTCTCCAGAACCAGCAGACATTCCTGAAAGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCATGACAAAGAGAAGTaGTTTCAGGAATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSHDKEK*FQECLL
Trigger: CAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCAGGGCTTTGAAGAGTaGAGCGATGATTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWQGFEE*SDDFLP
Trigger: AGGGAGAAAATCATCGCTGCACTCTTCAAAGCCCTG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCCACTTCCATCCACTTaGGCAGATGTTGCATCATCT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPPLPST*ADVASS
Trigger: AGATGATGCAACATCTGCGCAAGTGGATGGAAGTGG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAATTTGGCGATAATGTaGGCCAGGAGCAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQNLAIM*ARSKCP
Trigger: CGGACACTTGCTCCTGGCGCACATTATCGCCAAATT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAATTTGGCGATAATGTaGGCCAGGAGCAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSNLAIM*ARSKCP
Trigger: CGGACACTTGCTCCTGGCGCACATTATCGCCAAATT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTACACCTTGAAGTGTTaGACTATCAGGTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSYTLKC*TIRCRM
Trigger: CATTCTGCACCTGATAGTGCAACACTTCAAGGTGTA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCTTGTCGAACCACTaGAGCTTGAGTTCGGACTTG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSSLSNH*SLSSDL
Trigger: CAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAGGTGTCTGATTGGCTaGCATTGGGGAGTTATTCTT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGRCLIG*HWGVIL
Trigger: AAGAATAACTCCCCAATGGCAGCCAATCAGACACCT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTATCTCACCCGCGAGTaGATGCTGCTGTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFYLTRE*MLLSVR
Trigger: TCTGACAGACAGCAGCATGCACTCGCGGGTGAGATA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTACTTGCACCGCTTCTaGCACAGACCAGCCCACATA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFYLHRF*HRPAHI
Trigger: TATGTGGGCTGGTCTGTGGCAGAAGCGGTGCAAGTA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAGTATTTCCTCGATTTaGTCTCGTTCTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTISISSI*SRSDAG
Trigger: GCCGGCATCAGAACGAGAGCAAATCGAGGAAATACT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACTTGTCGACGGCATCTaGCAAAGTGTTTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKLVDGI*QSVFVI
Trigger: GATGACAAAAACACTTTGGCAGATGCCGTCGACAAG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTGCGGGTTTGCTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTGCATGCTTGTCGACGGCATCTaGCAAAGTGTTTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: PAGLLEMVFGEKGHIVCMLVDGI*QSVFVI
Trigger: GATGACAAAAACACTTTGGCAGATGCCGTCGACAAG...CATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGCAAACCCGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACCATCTGATCGACGATaGCTTCCAGGGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLPSDRR*LPGKTE
Trigger: TTCTGTCTTCCCTGGAAGGCATCGTCGATCAGATGG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAAGAATTTGGGGAGTTaGTTGGTCTTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSKNLGS*LVLASK
Trigger: CTTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGGTATGGGTAGATCTTaGCATTGTGTCCCCGGATGT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQGMGRS*HCVPGC
Trigger: ACATCCGGGGACACAATGGCAAGATCTACCCATACC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGACTGTGAAAAACAAGTaGCTCTTGGTGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGTVKNK*LLVVSF
Trigger: AAAGGAGACCACCAAGAGGCACTTGTTTTTCACAGT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCACCAGGGACACCAGTTaGTGGCTGTCCATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFTRDTS*WLSMFS
Trigger: AGAGAACATGGACAGCCAGCAACTGGTGTCCCTGGT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACCGCAGTTGCTGTGCTaGTTTCTCCTGAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQPQLLC*FLLKKL
Trigger: CAGTTTCTTCAGGAGAAACCAGCACAGCAACTGCGG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGCGGTTCACTACTTTTaGAAGCTCCTTGTAAATCTG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSAVHYF*KLLVNL
Trigger: CAGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCATACCAACCATTTCTaGGGGAGGCACTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYHTNHF*GRHCVL
Trigger: GAGAACACAGTGCCTCCCCCAGAAATGGTTGGTATG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAAAATGGCAGAGAGCTaGTACCGAGCAATTGTGTGG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYKMAES*YRAIVW
Trigger: CCACACAATTGCTCGGTACCAGCTCTCTGCCATTTT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCGACAGTCTGTGACTTaGAATGTCTGCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSRQSVT*NVCLSS
Trigger: GGAAGACAAGCAGACATTCCAAGTCACAGACTGTCG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATCACAGTCTGGCAGTTaGCCACACGGATGTATGTCT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSQSGS*PHGCMS
Trigger: AGACATACATCCGTGTGGCCAACTGCCAGACTGTGA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCACAGTCTGGCAGTTaGCCACACGGATGTATGTCT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSQSGS*PHGCMS
Trigger: AGACATACATCCGTGTGGCCAACTGCCAGACTGTGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATTCATTCTCACAGTCTaGCAGTTGGCCACACGGATG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQFILTV*QLATRM
Trigger: CATCCGTGTGGCCAACTGCCAGACTGTGAGAATGAA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGTTGGAGCCCATTTCTaGCAGGCGATCAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLVGAHF*QAIKEI
Trigger: TATCTCCTTGATCGCCTGCCAGAAATGGGCTCCAAC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTTCTCCATGGGGAGCTaGAGAGAAGCTTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTFSMGS*REALQS
Trigger: CGACTGCAAAGCTTCTCTCCAGCTCCCCATGGAGAA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCAGAGCAGTTTCAATaGCCTTCTCCATGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPEQFQ*PSPWGA
Trigger: AGCTCCCCATGGAGAAGGCCATTGAAACTGCTCTGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAAAAGTCTTCCGGGCTaGAGTGTCCTGGGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYKSLPG*SVLGFV
Trigger: TACAAAGCCCAGGACACTCCAGCCCGGAAGACTTTT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTGGAAAGACTTTTCCTaGGCGGCCACGATCTCTTCG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTWKDFS*AATISS
Trigger: CGAAGAGATCGTGGCCGCCCAGGAAAAGTCTTTCCA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCGTGTGTCACATGGTaGAAAGACTTTTCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSCVTW*KDFSWA
Trigger: CGCCCAGGAAAAGTCTTTCCACCATGTGACACACGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGCAGGACCTCTTTGTaGGGTTCCATGATCACCGTG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFCRTSL*GSMITV
Trigger: CACGGTGATCATGGAACCCCACAAAGAGGTCCTGCA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCATCATTGAAGGAATTTaGGAAGAGCCTCGTGACCGA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGIIEGI*EEPRDR
Trigger: TCGGTCACGAGGCTCTTCCCAAATTCCTTCAATGAT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTATCTCCTTCTGGATTaGGAGGTCCCAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYYLLLD*EVPRAA
Trigger: AGCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATGGGTTATCTCCTTCTaGATTGGGAGGTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQWVISF*IGRSQE
Trigger: CTCTTGGGACCTCCCAATCCAGAAGGAGATAACCCA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAAGCGTTTCACTTCCTaGGCAGAATCCACGGACAGG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFKRFTS*AESTDR
Trigger: CCTGTCCGTGGATTCTGCCCAGGAAGTGAAACGCTT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTGTGCTGCTTGTCAATaGGCTTGGCGAGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTCAACQ*AWRGES
Trigger: ACTCTCTCCTCGCCAAGCCCATTGACAAGCAGCACA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGATGTCAGGATGGCCTaGATGAAGTTCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYDVRMA*MKFFRI
Trigger: GATGCGGAAGAACTTCATCCAGGCCATCCTGACATC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACAGCCCGGAGGATTTTaGCATCTGGTGATTTTTCGA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLQPGGF*HLVIFR
Trigger: TCGAAAAATCACCAGATGCCAAAATCCTCCGGGCTG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCAGCCCGGAGGATTTTaGCATCTGGTGATTTTTCGA +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSQPGGF*HLVIFR
Trigger: TCGAAAAATCACCAGATGCCAAAATCCTCCGGGCTG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCTGATTGGCTGCCATTaGGGAGTTATTCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSLIGCH*GVILDP
Trigger: TGGGTCAAGAATAACTCCCCAATGGCAGCCAATCAG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCTGATTGGCTGCCATTaGGGAGTTATTCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLIGCH*GVILDP
Trigger: TGGGTCAAGAATAACTCCCCAATGGCAGCCAATCAG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAAAGTTCTTTGGTTTTaGGCGTGCTGGTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYKVLWF*ACWSDP
Trigger: GGGATCAGACCAGCACGCCCAAAACCAAAGAACTTT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCACTTGTCGTGCCTGTTaGTTAGCATGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSTCRAC*LACAAG
Trigger: ACCAGCTGCACATGCTAACCAACAGGCACGACAAGT...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGCACGCACTGGGACATaGCTTCCACAAAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTARTGT*LPQSSS
Trigger: TGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGAGCATCGAATCCAGTaGTCTTCCCAGAGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQEHRIQ*SSQSWY
Trigger: ATACCAGCTCTGGGAAGACCACTGGATTCGATGCTC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGTCAGGGCTTCCCACTaGTTCAATTCCTTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYVRASH*FNSLEH
Trigger: ATGCTCCAAGGAATTGAACCAGTGGGAAGCCCTGAC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTGTTCCTTCCCAGGTTaGTTGGCTGTAAGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTCSFPG*LAVSLR
Trigger: ACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCAGCCACTGGATGGGTaGCACACCAATGCAGTACTT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTQPLDG*HTNAVL
Trigger: AAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTACATGGTCGAGACGTTaGACACATTCTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTTWSRR*THSPGP
Trigger: TGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAATTTGGGGAGTTGCTTaGTCTTGGCCTCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKIWGVA*SWPPRF
Trigger: AAATCTTGGAGGCCAAGACCAAGCAACTCCCCAAAT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTATAATGCGTTGGCTTTaGCATCAGAAACTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSIMRWL*HQKLPR
Trigger: CCTGGGGAGTTTCTGATGCCAAAGCCAACGCATTAT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGATGTAATAATGCGTTaGCTTTGGCATCAGAAACTC +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKDVIMR*LWHQKL
Trigger: GAGTTTCTGATGCCAAAGCCAACGCATTATTACATC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCATAGTAACGGGAGATaGGGTTGTCATGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYHSNGR*GCHARC
Trigger: GCATCGAGCATGACAACCCCATCTCCCGTTACTATG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTATCAGAGCCAGCTaGATGGTGAACATCTTCCGG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTPIRAS*MVNIFR
Trigger: CCGGAAGATGTTCACCATCCAGCTGGCTCTGATAGG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCGGAGACCCCGATGGTaGTCAGAAACTCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRRPRW*SETQKC
Trigger: ACATTTCTGAGTTTCTGACCACCATCGGGGTCTCCG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAGAGTTAAAAATGGATaGAAGGGAGCTGTTCGTACA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKRVKNG*KGAVRT
Trigger: TGTACGAACAGCTCCCTTCCATCCATTTTTAACTCT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGATGCAGAATGGGACTaGTTACCCACTGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLDAEWD*LPTELG
Trigger: GCCAAGTTCAGTGGGTAACCAGTCCCATTCTGCATC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGATGCAGAATGGGACTaGTTACCCACTGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYDAEWD*LPTELG
Trigger: GCCAAGTTCAGTGGGTAACCAGTCCCATTCTGCATC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGGATCTGATGCAGAATaGGACTGGTTACCCACTGAA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPGSDAE*DWLPTE
Trigger: TTCAGTGGGTAACCAGTCCCATTCTGCATCAGATCC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGCTGAAGGTACACACTaGATGAAGGACAATGAGGAG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIAEGTH*MKDNEE
Trigger: CTCCTCATTGTCCTTCATCCAGTGTGTACCTTCAGC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATGTTTCTGACATCATaGCGTGTGCTCCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSMFLTS*RVLLGD
Trigger: GTCCCCAAGGAGCACACGCCATGATGTCAGAAACAT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TGCTACGATAGCTTCTTAAAGGATGTCTTTTTCTTTGCACAAATACTGGAAATGCTGGAGAAGGTTCTGTaGCCTGCGGCAGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: CYDSFLKDVFFFAQILEMLEKVL*PAAEVQ
Trigger: CTGGACCTCTGCCGCAGGCCACAGAACCTTCTCCAG...CATTTCCAGTATTTGTGCAAAGAAAAAGACATCCTTTAAGAAGCTATCGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTATTGTCTGCATGGTCTaGACCCTCCTCACTCTGGAG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTIVCMV*TLLTLE
Trigger: CTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAAT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCTCAAACTGACAGAATaGAGACAAGGGACATCTCCC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLKLTE*RQGTSP
Trigger: GGGAGATGTCCCTTGTCTCCATTCTGTCAGTTTGAG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359863.8
ENST00000456197.2
3UTR CAA 72 bp TTGTCAAGGCCCTTTCATTTGACCCTGTGGTGGGATTaGGGTAAACTCAGCTGTAATCATCATTCCGTGGTA +
Preference number: 4 (lower is better)
Translates to: LSRPFHLTLWWD*GKLSCNHHSVV
Trigger: TACCACGGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACACTTTCAGAGAAAGTaGTCCCCTCGGAATGATGGA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQHFQRK*SPRNDG
Trigger: TCCATCATTCCGAGGGGATCACTTTCTCTGAAAGTG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGCTTGTGCAGACACCTaGATGGCAATGGTGTTCATG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFACADT*MAMVFM
Trigger: CATGAACACCATTGCCATTCAGGTGTCTGCACAAGC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCCTTTCACCATCTGCTaGGAATACTTAGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPPFTIC*EYLVTN
Trigger: GTTGGTGACTAAGTATTCTCAGCAGATGGTGAAAGG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTTCTCAGCTCTGTGGTaGGGATGTGTTTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFFSALW*GCVWQQ
Trigger: TTGCTGCCAAACACATCCTCACCACAGAGCTGAGAA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCAATTGTGTGGAATTTaGGAACGAAAACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGQLCGI*ERKPPA
Trigger: TGCTGGAGGTTTTCGTTCTCAAATTCCACACAATTG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAACTTCGACAGTCTGTaGCTTGGAATGTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYNFDSL*LGMSAC
Trigger: ACAAGCAGACATTCCAAGTCACAGACTGTCGAAGTT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAACTTCGACAGTCTGTaGCTTGGAATGTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWNFDSL*LGMSAC
Trigger: ACAAGCAGACATTCCAAGTCACAGACTGTCGAAGTT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCACACACCAAGGTTTTaGCCAAACTTCGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYHTPRF*PNFDSL
Trigger: CAGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACACACACCAAGGTTTTaGCCAAACTTCGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSHTPRF*PNFDSL
Trigger: CAGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACACACACCAAGGTTTTaGCCAAACTTCGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQHTPRF*PNFDSL
Trigger: CAGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGAGGCAAGAACTCCTaGTACAAGAGATCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRGKNS*YKRSWL
Trigger: TAGCCACGATCTCTTGTATCAGGAGTTCTTGCCTCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCACAAAATTTATCATTaGAGGAATTTGGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASHKIYH*RNLGRA
Trigger: GGCTCTTCCCAAATTCCTTCAATGATAAATTTTGTG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACGAAGTTGGGGTCGTTaGAGTCTACAAAGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQRSWGR*SLQSER
Trigger: TCTTTCGCTTTGTAGACTTCAACGACCCCAACTTCG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGCCTTGAGGAGACTATaGAAAACCTGCAGGACGATC +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTALRRL*KTCRTI
Trigger: GATCGTCCTGCAGGTTTTTCATAGTCTCCTCAAGGC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGATTTTGGCATCTGGTaGTTTTTCGATGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGDFGIW*FFDEGC
Trigger: ACATCCCTCATCGAAAAATCACCAGATGCCAAAATC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGCTTCGGCTTAATCTaGAGACTCAGACCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTICFGLI*RLRPFS
Trigger: TGAAAAGGGTCTGAGTCTTCAGATTAAGCCGAAGCA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCTCCTCGGACTTGTTaGTCTGAGCCAAGAACATTC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPPRTC*SEPRTF
Trigger: GAATGTTCTTGGCTCAGATCAACAAGTCCGAGGAGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAGTCAAAATCCGTCGTaGACTGGCCTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSQNPS*TGLSAS
Trigger: AGAAGCTGAAAGGCCAGTTCACGACGGATTTTGACT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCATAACCGCAACCCAGTaGAACTATGGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFITATQ*NYGASV
Trigger: CACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTAT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATCTTTTGGGCTGGTTTaGTTCTCAAGAGAAAAGTAT +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSFGLV*FSREKY
Trigger: ATACTTTTCTCTTGAGAAGCAAACCAGCCCAAAAGA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTTGTCCTTTTCTCCTTaGTTCTCGAAGGGAGGCACG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLSFSP*FSKGGT
Trigger: CGTGCCTCCCTTCGAGAAGCAAGGAGAAAAGGACAA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCTTCACCAGGTGCTTTaGATGATGTTATGCCCCACG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFLHQVL*MMLCPT
Trigger: CGTGGGGCATAACATCATGCAAAGCACCTGGTGAAG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAACACACCAGCGAAATaGTCCAATACCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLNTPAK*SNTSFS
Trigger: GGAGAAGGAGGTATTGGAGCATTTCGCTGGTGTGTT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAGAGGTAGTAGGATTTaGCAAGAAGGAATTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGRGSRI*QEGIGN
Trigger: GTTGCCAATTCCTTCTTGGCAAATCCTACTACCTCT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCTGAGACCCATTGAGTaGAGACACCAAGGGATCCAT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFLRPIE*RHQGIH
Trigger: ATGGATCCCTTGGTGTCTGCACTCAATGGGTCTCAG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGCTGGAGAGAAGCTTTaGAGTCGGAAAACTCCACAG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTAGEKL*SRKTPQ
Trigger: CTGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGCCCAGGATGATACTTaGAACATCAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGAQDDT*NIKYHS
Trigger: GCTGTGATATTTGATGTTGCAAGTATCATCCTGGGC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACTGTTCATAACAACATaGACACAGGCGCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLLFITT*TQALHD
Trigger: ATCGTGGAGCGCCTGTGTGCATGTTGTTATGAACAG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACTGTTCATAACAACATaGACACAGGCGCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSLFITT*TQALHD
Trigger: ATCGTGGAGCGCCTGTGTGCATGTTGTTATGAACAG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACTGTTCATAACAACATaGACACAGGCGCTCCACGAT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQLFITT*TQALHD
Trigger: ATCGTGGAGCGCCTGTGTGCATGTTGTTATGAACAG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCTTTCAGGAATGTCTaGTGGTTCTGGAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLAFRNV*WFWRTQ
Trigger: TTGGGTTCTCCAGAACCAGCAGACATTCCTGAAAGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCTTTCAGGAATGTCTaGTGGTTCTGGAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQAFRNV*WFWRTQ
Trigger: TTGGGTTCTCCAGAACCAGCAGACATTCCTGAAAGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCTTTCAGGAATGTCTaGTGGTTCTGGAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSAFRNV*WFWRTQ
Trigger: TTGGGTTCTCCAGAACCAGCAGACATTCCTGAAAGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAATGTTCTCCTTGCGGTaGCTCTCTTGGAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLMFSLR*LSWKFS
Trigger: TGAGAACTTCCAAGAGAGGCACCGCAAGGAGAACAT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAATGTTCTCCTTGCGGTaGCTCTCTTGGAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQMFSLR*LSWKFS
Trigger: TGAGAACTTCCAAGAGAGGCACCGCAAGGAGAACAT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCTCCGTAATTCCTTTTaGAGTAGTTCAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPLRNSF*SSSAGS
Trigger: ACTGCCTGCTGAACTACTGCAAAAGGAATTACGGAG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCAGGATTCAAGATATaGTGCAGAACTTTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGAGFKI*CRTLAF
Trigger: AAAAGCTAAAGTTCTGCAGCATATCTTGAATCCTGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATACACCTTGAAGTGTTaGACTATCAGGTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKYTLKC*TIRCRM
Trigger: CATTCTGCACCTGATAGTGCAACACTTCAAGGTGTA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTACACCTTGAAGTGTTaGACTATCAGGTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGYTLKC*TIRCRM
Trigger: CATTCTGCACCTGATAGTGCAACACTTCAAGGTGTA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCACCACAGTGTCTGTGTaGTGCTTGTCAATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFTTVSV*CLSMGL
Trigger: CAAGCCCATTGACAAGCAGCACACAGACACTGTGGT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTAGCTTGTCGAACCACTaGAGCTTGAGTTCGGACTTG +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSLSNH*SLSSDL
Trigger: CAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAGGTGTCTGATTGGCTaGCATTGGGGAGTTATTCTT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLRCLIG*HWGVIL
Trigger: AAGAATAACTCCCCAATGGCAGCCAATCAGACACCT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAACCTCGAAAAACTTTaGCCTGATGAGTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFNLEKL*PDEWLG
Trigger: GCCCAGCCACTCATCAGGGCAAAGTTTTTCGAGGTT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCCAGAAACTTGTCGTaGCTGTTGGTTAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSRNLS*LLVSMC
Trigger: GCACATGCTAACCAACAGGCACGACAAGTTTCTGGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTCCAGAAACTTGTCGTaGCTGTTGGTTAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSRNLS*LLVSMC
Trigger: GCACATGCTAACCAACAGGCACGACAAGTTTCTGGA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTTCATAGGATTCTTGTaGCTGCTCAAAGAACCCGTG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYFIGFL*LLKEPV
Trigger: CACGGGTTCTTTGAGCAGGCACAAGAATCCTATGAA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTTCATAGGATTCTTGTaGCTGCTCAAAGAACCCGTG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWFIGFL*LLKEPV
Trigger: CACGGGTTCTTTGAGCAGGCACAAGAATCCTATGAA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTTCATAGGATTCTTGTaGCTGCTCAAAGAACCCGTG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSFIGFL*LLKEPV
Trigger: CACGGGTTCTTTGAGCAGGCACAAGAATCCTATGAA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCTTGTCGACGGCATCTaGCAAAGTGTTTTTGTCATC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPLVDGI*QSVFVI
Trigger: GATGACAAAAACACTTTGGCAGATGCCGTCGACAAG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCACTTCAGCTGTCTGTaGCGAGAAATTGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWHFSCL*REIAQE
Trigger: TTCTTGAGCAATTTCTCGGCACAGACAGCTGAAGTG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACACTTCAGCTGTCTGTaGCGAGAAATTGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLHFSCL*REIAQE
Trigger: TTCTTGAGCAATTTCTCGGCACAGACAGCTGAAGTG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGTATGGGTAGATCTTaGCATTGTGTCCCCGGATGT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGMGRS*HCVPGC
Trigger: ACATCCGGGGACACAATGGCAAGATCTACCCATACC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGCTACGATAGCTTCTTAAAGGATGTCTTTTTCTTTGCACAAATACTGGAAATGGGTTGTCATGCTCGATaGCCTTCTTGGCGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: CYDSFLKDVFFFAQILEMGCHAR*PSWRSA
Trigger: AGCGCTGCGCCAAGAAGGGCATCGAGCATGACAACC...CATTTCCAGTATTTGTGCAAAGAAAAAGACATCCTTTAAGAAGCTATCGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTTGAGTCTATTTAAATaGAGGACGAATTCCGCGAAG +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSLSLFK*RTNSAK
Trigger: CTTCGCGGAATTCGTCCTGCATTTAAATAGACTCAA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCACTGAACTTGGCTGCTaGTGTCCAGAATCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFTELGC*CPESLL
Trigger: CAAGAGCGATTCTGGACAGCAGCAGCCAAGTTCAGT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCCTTAGAGTCTCTCTaGCAGTATATCCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQALESL*QYILSQ
Trigger: TTGGCTCAGGATATACTGCCAGAGAGACTCTAAGGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAAATGGCAGAGAGCTaGTACCGAGCAATTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSKMAES*YRAIVW
Trigger: CCACACAATTGCTCGGTACCAGCTCTCTGCCATTTT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAAAATGGCAGAGAGCTaGTACCGAGCAATTGTGTGG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYKMAES*YRAIVW
Trigger: CCACACAATTGCTCGGTACCAGCTCTCTGCCATTTT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACAGTCTGGCAGTTaGCCACACGGATGTATGTCT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSQSGS*PHGCMS
Trigger: AGACATACATCCGTGTGGCCAACTGCCAGACTGTGA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATTCAGGAATGTCTGCTaGTTCTGGAGAACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSFRNVC*FWRTQV
Trigger: CACTTGGGTTCTCCAGAACCAGCAGACATTCCTGAA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTTCAGGAATGTCTGCTaGTTCTGGAGAACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYFRNVC*FWRTQV
Trigger: CACTTGGGTTCTCCAGAACCAGCAGACATTCCTGAA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAAGTCGTGTGTCACATaGTGGAAAGACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLKSCVT*WKDFSW
Trigger: CCAGGAAAAGTCTTTCCACCATGTGACACACGACTT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAAGTCGTGTGTCACATaGTGGAAAGACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSKSCVT*WKDFSW
Trigger: CCAGGAAAAGTCTTTCCACCATGTGACACACGACTT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAATCATTGAAGGAATTTaGGAAGAGCCTCGTGACCGA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLIIEGI*EEPRDR
Trigger: TCGGTCACGAGGCTCTTCCCAAATTCCTTCAATGAT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAAGGCTCGGAGCAGCTaGAACAGCAATTCTATATCT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYKARSS*NSNSIS
Trigger: AGATATAGAATTGCTGTTCCAGCTGCTCCGAGCCTT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTATCTCCTTCTGGATTaGGAGGTCCCAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTYLLLD*EVPRAA
Trigger: AGCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTATAGTTCACTTGGTTTaGCTGCTCCACAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSIVHLV*LLHSHQ
Trigger: CTGATGACTGTGGAGCAGCCAAACCAAGTGAACTAT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGATAGTTCACTTGGTTTaGCTGCTCCACAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPIVHLV*LLHSHQ
Trigger: CTGATGACTGTGGAGCAGCCAAACCAAGTGAACTAT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCATTTGGAGGCCACACTaGAAGTACTCGGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFIWRPH*KYSALL
Trigger: CAACAGAGCCGAGTACTTCCAGTGTGGCCTCCAAAT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGATGTCAGGATGGCCTaGATGAAGTTCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFDVRMA*MKFFRI
Trigger: GATGCGGAAGAACTTCATCCAGGCCATCCTGACATC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACAGCCCGGAGGATTTTaGCATCTGGTGATTTTTCGA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSQPGGF*HLVIFR
Trigger: TCGAAAAATCACCAGATGCCAAAATCCTCCGGGCTG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACTGATTGGCTGCCATTaGGGAGTTATTCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSLIGCH*GVILDP
Trigger: TGGGTCAAGAATAACTCCCCAATGGCAGCCAATCAG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAAGTTCTTTGGTTTTaGGCGTGCTGGTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSKVLWF*ACWSDP
Trigger: GGGATCAGACCAGCACGCCCAAAACCAAAGAACTTT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAACTGGTTCAATTCCTTaGAGCATCGAATCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTITGSIP*SIESSG
Trigger: ACCACTGGATTCGATGCTCCAAGGAATTGAACCAGT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTGCTGTCGAATCTTCTaGAAGCAATCCACGATAGGA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPCCRIF*KQSTIG
Trigger: TCCTATCGTGGATTGCTTCCAGAAGATTCGACAGCA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGCTGTCGAATCTTCTaGAAGCAATCCACGATAGGA +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLCCRIF*KQSTIG
Trigger: TCCTATCGTGGATTGCTTCCAGAAGATTCGACAGCA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGCTGTCGAATCTTCTaGAAGCAATCCACGATAGGA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTICCRIF*KQSTIG
Trigger: TCCTATCGTGGATTGCTTCCAGAAGATTCGACAGCA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGTTCATGACGAGGTATaGGTAGATCTTGCCATTGTG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIVHDEV*VDLAIV
Trigger: CACAATGGCAAGATCTACCCATACCTCGTCATGAAC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCGGGTTTGCTTGAAATaGTGTTTGGAGAAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRVCLK*CLEKKG
Trigger: GCCCTTTTTCTCCAAACACCATTTCAAGCAAACCCG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGTTCTGGCAAGCGGTaGAGACGTTCGATGAAGAAA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGSGKR*RRSMKK
Trigger: TTTCTTCATCGAACGTCTCCACCGCTTGCCAGAACC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTTCAGTGTCACCGGTTaGTTCTTTGATACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPFSVTG*FFDTPH
Trigger: GTGAGGAGTATCAAAGAACCAACCGGTGACACTGAA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGCACGTCATCATGCCTaGCTAATTTTTGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGARHHA*LIFVFV
Trigger: AACAAATACAAAAATTAGCCAGGCATGATGACGTGC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACTCAAACTGACAGAATaGAGACAAGGGACATCTCCC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSLKLTE*RQGTSP
Trigger: GGGAGATGTCCCTTGTCTCCATTCTGTCAGTTTGAG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359863.8
ENST00000456197.2
CDS-3UTR TCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAGGAATGTAGAATACTaGGGAGATGACGTGACATTC +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLRNVEY*GDDVTF
Trigger: GAATGTCACGTCATCTCCTCAGTATTCTACATTCCT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGGCAATGGTGTTCATaGTCAAGGGCACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFWQWCS*SRAQTQ
Trigger: CTGAGTTTGTGCCCTTGATCATGAACACCATTGCCA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACCTTTCACCATCTGCTaGGAATACTTAGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSPFTIC*EYLVTN
Trigger: GTTGGTGACTAAGTATTCTCAGCAGATGGTGAAAGG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGTCCATGCAAGGAATaGACTGGTTTCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFCPCKE*TGFSAL
Trigger: CAGAGCTGAGAAACCAGTTCATTCCTTGCATGGACA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGCTCCAAGTTCTGACTaGGGCTTACACTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYAPSSD*GLHFLK
Trigger: TTTTAAGAAGTGTAAGCCTCAGTCAGAACTTGGAGC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTTTGGAAGATTTCTTTaGACGTTAAGGGGTTCATCA +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSFGRFL*TLRGSS
Trigger: TGATGAACCCCTTAACGTTCAAAGAAATCTTCCAAA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGAGGCAAGAACTCCTaGTACAAGAGATCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFRGKNS*YKRSWL
Trigger: TAGCCACGATCTCTTGTATCAGGAGTTCTTGCCTCT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCACAAAATTTATCATTaGAGGAATTTGGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSHKIYH*RNLGRA
Trigger: GGCTCTTCCCAAATTCCTTCAATGATAAATTTTGTG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCGAAGTTGGGGTCGTTaGAGTCTACAAAGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFRSWGR*SLQSER
Trigger: TCTTTCGCTTTGTAGACTTCAACGACCCCAACTTCG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCATTGCGTGAGCCTTaGGGAGACTATGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPLREP*GDYEKP
Trigger: AGGTTTTTCATAGTCTCCTCAAGGCTCACGCAATGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGGATGAGACAGAATTaGCTCCTTCTCCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQRMRQN*LLLHWN
Trigger: ATTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTCTCTTAATGGAGGATaGGACAGAATTGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYSLNGG*DRIDSF
Trigger: GAAGGAGTCAATTCTGTCTCATCCTCCATTAAGAGA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGATTTTGGCATCTGGTaGTTTTTCGATGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYDFGIW*FFDEGC
Trigger: ACATCCCTCATCGAAAAATCACCAGATGCCAAAATC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTATTCTTCCACGATTTTaGCCACAGCCCGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTILPRF*PQPGGF
Trigger: AAATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAAT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATGCTTCGGCTTAATCTaGAGACTCAGACCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSCFGLI*RLRPFS
Trigger: TGAAAAGGGTCTGAGTCTTCAGATTAAGCCGAAGCA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAAGCATAGCGTTATTTaGACTGGGATCATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYKHSVI*TGIMLR
Trigger: TCTCAGCATGATCCCAGTTCAAATAACGCTATGCTT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAAGCATAGCGTTATTTaGACTGGGATCATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIKHSVI*TGIMLR
Trigger: TCTCAGCATGATCCCAGTTCAAATAACGCTATGCTT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTTTTTCCATACTGGATaGTCGCTGAAGCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSFFHTG*SLKLMH
Trigger: ATGCATCAGCTTCAGCGATCATCCAGTATGGAAAAA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGCTACGATAGCTTCTTAAAGGATGTCTTTTTCTTTGCACAAATACTGGAAATGCTCCACAAGGGAAAGTaGAGAGGGGTTGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CYDSFLKDVFFFAQILEMLHKGK*RGVVLH
Trigger: GTGGAGGACAACCCCTCTTCACTTTCCCTTGTGGAG...CATTTCCAGTATTTGTGCAAAGAAAAAGACATCCTTTAAGAAGCTATCGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGAGAAAAACCAGCATaGTGGGTTCATCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQREKPA*WVHQLL
Trigger: CAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGAGAAAAACCAGCATaGTGGGTTCATCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYREKPA*WVHQLL
Trigger: CAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAACAATGGAGGGTAAATaGAAGGCAAGGAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQTMEGK*KARRVK
Trigger: CTTGACTCTCCTTGCCTTTCATTTACCCTCCATTGT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCACAAATACTGGAAATaGGCTTCCCCTTTACTGTGT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYHKYWK*ASPLLC
Trigger: ACACAGTAAAGGGGAAGCTCATTTCCAGTATTTGTG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTATGTTGCCTCGCTTGTaGAGACACCTGAATGGCAAT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTMLPRL*RHLNGN
Trigger: ATTGCCATTCAGGTGTCTGCACAAGCGAGGCAACAT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCTCCTTTCTGAGGTGTaGAGTCTCTGCTGGACAATT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLLSEV*SLCWTI
Trigger: AATTGTCCAGCAGAGACTGCACACCTCAGAAAGGAG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGAGGTAGTAGGATTTaGCAAGAAGGAATTGGCAAC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSRGSRI*QEGIGN
Trigger: GTTGCCAATTCCTTCTTGGCAAATCCTACTACCTCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTTGTTCATTTTCAGCTaGAAAGAGGGAGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYLFIFS*KEGDRA
Trigger: GGCTCTGTCTCCCTCTTTGCAGCTGAAAATGAACAA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATTGTTCATTTTCAGCTaGAAAGAGGGAGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQLFIFS*KEGDRA
Trigger: GGCTCTGTCTCCCTCTTTGCAGCTGAAAATGAACAA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCCCAGGATGATACTTaGAACATCAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPAQDDT*NIKYHS
Trigger: GCTGTGATATTTGATGTTGCAAGTATCATCCTGGGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTACACCTTGAAGTGTTaGACTATCAGGTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSYTLKC*TIRCRM
Trigger: CATTCTGCACCTGATAGTGCAACACTTCAAGGTGTA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGCACTTCTAGGCCCGTaGAGATATTCCCATAGTTCA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTALLGP*RYSHSS
Trigger: TGAACTATGGGAATATCTGCACGGGCCTAGAAGTGC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGGTGTCTGATTGGCTaGCATTGGGGAGTTATTCTT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQRCLIG*HWGVIL
Trigger: AAGAATAACTCCCCAATGGCAGCCAATCAGACACCT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATTTGGCTTTATCCATTaGCTTTTCATAGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKFGFIH*LFIGFL
Trigger: CAAGAATCCTATGAAAAGGCAATGGATAAAGCCAAA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGAACATTCCCTTCAGTaGATAAAATTCGGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGEHSLQ*IKFGCH
Trigger: ATGACAGCCGAATTTTATGCACTGAAGGGAATGTTC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGAGAAGGCTTTGTTTaGCTCCTCGGACTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSREGFV*LLGLVD
Trigger: ATCAACAAGTCCGAGGAGGCAAACAAAGCCTTCTCT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATCTGTGCCGAGAAATTaGTCAAGAACCGGCACTTTT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSVPRN*SRTGTF
Trigger: AAAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTCTGTGCCGAGAAATTaGTCAAGAACCGGCACTTTT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSVPRN*SRTGTF
Trigger: AAAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGACTGTGAAAAACAAGTaGCTCTTGGTGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWTVKNK*LLVVSF
Trigger: AAAGGAGACCACCAAGAGGCACTTGTTTTTCACAGT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATACTGTGAAAAACAAGTaGCTCTTGGTGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYTVKNK*LLVVSF
Trigger: AAAGGAGACCACCAAGAGGCACTTGTTTTTCACAGT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAATAAGTTTCAGCTCTaGCATTTCCAACCGCTTCGC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSNKFQL*HFQPLR
Trigger: GCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAACAAAAGCACGAAGCTaGTGTGAGGTGTTATTTCCG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQTKARS*CEVLFP
Trigger: CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAGTAATTCACCTTTCTaGACCTCCTCAGCTGATCAT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTISNSPF*TSSADH
Trigger: ATGATCAGCTGAGGAGGTGCAGAAAGGTGAATTACT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGACGAAGATGTTCGTTaGTTGGTATTCTATGAATTA +
Preference number: 4 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKDEDVR*LVFYEL
Trigger: TAATTCATAGAATACCAACCAACGAACATCTTCGTC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGCGGTTCACTACTTTTaGAAGCTCCTTGTAAATCTG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYAVHYF*KLLVNL
Trigger: CAGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGCGGTTCACTACTTTTaGAAGCTCCTTGTAAATCTG +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLAVHYF*KLLVNL
Trigger: CAGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCAATTTGAAAGTAACTaGAGCATTCCTTTCACCATC +
Preference number: 4 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSQFESN*SIPFTI
Trigger: GATGGTGAAAGGAATGCTCCAGTTACTTTCAAATTG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTACCGAGCAATTGTGTaGAATTTGAGAACGAAAACC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGYRAIV*NLRTKT
Trigger: GGTTTTCGTTCTCAAATTCCACACAATTGCTCGGTA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTGCCAAGAAGGAATTaGCAACAATCTGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLPRRN*QQSEEH
Trigger: ATGCTCTTCAGATTGTTGCCAATTCCTTCTTGGCAA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAAGTCGTGTGTCACATaGTGGAAAGACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQKSCVT*WKDFSW
Trigger: CCAGGAAAAGTCTTTCCACCATGTGACACACGACTT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCATCCCGCAGAGGTCTaGCGTCTTTGTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYHPAEV*RLCVLK
Trigger: TTTTAAAACACAAAGACGCCAGACCTCTGCGGGATG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCTGATTGGCTGCCATTaGGGAGTTATTCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLIGCH*GVILDP
Trigger: TGGGTCAAGAATAACTCCCCAATGGCAGCCAATCAG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAGACACGACGTTTCATaGAGTTGTCAAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPRHDVS*SCQKPR
Trigger: TCGAGGTTTTTGACAACTCCATGAAACGTCGTGTCT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGTTAGCATGTGCAGCTaGTTTCCAATGTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYVSMCS*FPMSFS
Trigger: AGAAAAGGACATTGGAAACCAGCTGCACATGCTAAC...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGTTAGCATGTGCAGCTaGTTTCCAATGTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIVSMCS*FPMSFS
Trigger: AGAAAAGGACATTGGAAACCAGCTGCACATGCTAAC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGCGATTTTTCCATACTaGATGATCGCTGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIAIFPY*MIAEAD
Trigger: ATCAGCTTCAGCGATCATCCAGTATGGAAAAATCGC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACACGATAGGAACAGTTaGAATAGTATGAATCCGACT +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKHDRNS*NSMNPT
Trigger: AGTCGGATTCATACTATTCCAACTGTTCCTATCGTG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAAAGCCACAGCACCTTaGCTAAGTATTTCCTCGATT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLKATAP*LSISSI
Trigger: AATCGAGGAAATACTTAGCCAAGGTGCTGTGGCTTT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAAGCTTCATGGATCCTaGAACGCTGAAGTCAAAATC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSKLHGS*NAEVKI
Trigger: GATTTTGACTTCAGCGTTCCAGGATCCATGAAGCTT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAAGCTTCATGGATCCTaGAACGCTGAAGTCAAAATC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIKLHGS*NAEVKI
Trigger: GATTTTGACTTCAGCGTTCCAGGATCCATGAAGCTT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAATTTGGGGAGTTGCTTaGTCTTGGCCTCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLIWGVA*SWPPRF
Trigger: AAATCTTGGAGGCCAAGACCAAGCAACTCCCCAAAT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCAGACCGGAGAATCCTaGCTTCTTAAAAGATTATTT +
Preference number: 4 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGQTGES*LLKRLF
Trigger: AAATAATCTTTTAAGAAGCCAGGATTCTCCGGTCTG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAGAGTTAAAAATGGATaGAAGGGAGCTGTTCGTACA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGRVKNG*KGAVRT
Trigger: TGTACGAACAGCTCCCTTCCATCCATTTTTAACTCT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGGTAGCCTGGAACAATaGAGGGTAAATGAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQGSLEQ*RVNERQ
Trigger: TTGCCTTTCATTTACCCTCCATTGTTCCAGGCTACC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR TCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGACTGAGGAGATGACGTaGCATTCTCAAAATTTTCAC +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPTEEMT*HSQNFH
Trigger: GTGAAAATTTTGAGAATGTCACGTCATCTCCTCAGT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGGAATGTAGAATACTaGGGAGATGACGTGACATTC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRNVEY*GDDVTF
Trigger: GAATGTCACGTCATCTCCTCAGTATTCTACATTCCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGGAATGTAGAATACTaGGGAGATGACGTGACATTC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQRNVEY*GDDVTF
Trigger: GAATGTCACGTCATCTCCTCAGTATTCTACATTCCT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCTTTCACCATCTGCTaGGAATACTTAGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPFTIC*EYLVTN
Trigger: GTTGGTGACTAAGTATTCTCAGCAGATGGTGAAAGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTTTCACCATCTGCTaGGAATACTTAGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTPFTIC*EYLVTN
Trigger: GTTGGTGACTAAGTATTCTCAGCAGATGGTGAAAGG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCTTGGAGCCCAGGATaGTACTTGCAACATCAAATA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPWSPG*YLQHQI
Trigger: TATTTGATGTTGCAAGTATCATCCTGGGCTCCAAGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCAGCCGGGATCAGATaGAAAAGGTTTATAATTGCT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSAAGIR*KRFIIA
Trigger: AGCAATTATAAACCTTTTTCATCTGATCCCGGCTGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATCTCTTAATGGAGGATaGGACAGAATTGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSSLNGG*DRIDSF
Trigger: GAAGGAGTCAATTCTGTCTCATCCTCCATTAAGAGA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCTCTTAATGGAGGATaGGACAGAATTGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSLNGG*DRIDSF
Trigger: GAAGGAGTCAATTCTGTCTCATCCTCCATTAAGAGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTTGGGGAGTTATTCTTaGCCCATTCTTCCACGATTT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYLGSYS*PILPRF
Trigger: AAATCGTGGAAGAATGGGTCAAGAATAACTCCCCAA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCTTTTGGGCTGGTTTaGTTCTCAAGAGAAAAGTAT +
Preference number: 4 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGSFGLV*FSREKY
Trigger: ATACTTTTCTCTTGAGAAGCAAACCAGCCCAAAAGA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTCTTTTGGGCTGGTTTaGTTCTCAAGAGAAAAGTAT +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSFGLV*FSREKY
Trigger: ATACTTTTCTCTTGAGAAGCAAACCAGCCCAAAAGA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAATAATGGGCAATTCTaGCAACACTTTCAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGNNGQF*QHFQRK
Trigger: CTTTCTCTGAAAGTGTTGGCAGAATTGCCCATTATT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAGAGGTAGTAGGATTTaGCAAGAAGGAATTGGCAAC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLRGSRI*QEGIGN
Trigger: GTTGCCAATTCCTTCTTGGCAAATCCTACTACCTCT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGAGGTAGTAGGATTTaGCAAGAAGGAATTGGCAAC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRGSRI*QEGIGN
Trigger: GTTGCCAATTCCTTCTTGGCAAATCCTACTACCTCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTTGTTCATTTTCAGCTaGAAAGAGGGAGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLFIFS*KEGDRA
Trigger: GGCTCTGTCTCCCTCTTTGCAGCTGAAAATGAACAA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCCCAGGATGATACTTaGAACATCAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSAQDDT*NIKYHS
Trigger: GCTGTGATATTTGATGTTGCAAGTATCATCCTGGGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACATGACAAAGAGAAGTaGTTTCAGGAATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLHDKEK*FQECLL
Trigger: CAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCATGACAAAGAGAAGTaGTTTCAGGAATGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYHDKEK*FQECLL
Trigger: CAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGAACATTCCCTTCAGTaGATAAAATTCGGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWEHSLQ*IKFGCH
Trigger: ATGACAGCCGAATTTTATGCACTGAAGGGAATGTTC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGAGAAGGCTTTGTTTaGCTCCTCGGACTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFREGFV*LLGLVD
Trigger: ATCAACAAGTCCGAGGAGGCAAACAAAGCCTTCTCT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCTGTGCCGAGAAATTaGTCAAGAACCGGCACTTTT +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSVPRN*SRTGTF
Trigger: AAAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAACTGTGAAAAACAAGTaGCTCTTGGTGGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQTVKNK*LLVVSF
Trigger: AAAGGAGACCACCAAGAGGCACTTGTTTTTCACAGT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTTGAGTCTATTTAAATaGAGGACGAATTCCGCGAAG +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLSLFK*RTNSAK
Trigger: CTTCGCGGAATTCGTCCTGCATTTAAATAGACTCAA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAGGTGCACGTCATCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRCTSS*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGATGACGTGCACCT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCGGTTCACTACTTTTaGAAGCTCCTTGTAAATCTG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAVHYF*KLLVNL
Trigger: CAGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCGGTTCACTACTTTTaGAAGCTCCTTGTAAATCTG +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLAVHYF*KLLVNL
Trigger: CAGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCAATTTGAAAGTAACTaGAGCATTCCTTTCACCATC +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGQFESN*SIPFTI
Trigger: GATGGTGAAAGGAATGCTCCAGTTACTTTCAAATTG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTACCGAGCAATTGTGTaGAATTTGAGAACGAAAACC +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSYRAIV*NLRTKT
Trigger: GGTTTTCGTTCTCAAATTCCACACAATTGCTCGGTA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATTGCCAAGAAGGAATTaGCAACAATCTGAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLPRRN*QQSEEH
Trigger: ATGCTCTTCAGATTGTTGCCAATTCCTTCTTGGCAA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAAGTCGTGTGTCACATaGTGGAAAGACTTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFKSCVT*WKDFSW
Trigger: CCAGGAAAAGTCTTTCCACCATGTGACACACGACTT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCATCCCGCAGAGGTCTaGCGTCTTTGTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTHPAEV*RLCVLK
Trigger: TTTTAAAACACAAAGACGCCAGACCTCTGCGGGATG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGACACGACGTTTCATaGAGTTGTCAAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRHDVS*SCQKPR
Trigger: TCGAGGTTTTTGACAACTCCATGAAACGTCGTGTCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGACACGACGTTTCATaGAGTTGTCAAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQRHDVS*SCQKPR
Trigger: TCGAGGTTTTTGACAACTCCATGAAACGTCGTGTCT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGTTAGCATGTGCAGCTaGTTTCCAATGTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYVSMCS*FPMSFS
Trigger: AGAAAAGGACATTGGAAACCAGCTGCACATGCTAAC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACACGATAGGAACAGTTaGAATAGTATGAATCCGACT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIHDRNS*NSMNPT
Trigger: AGTCGGATTCATACTATTCCAACTGTTCCTATCGTG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACACGATAGGAACAGTTaGAATAGTATGAATCCGACT +
Preference number: 4 (lower is better)
Translates to: LPFLHANYQENNRNPVKLHDRNS*NSMNPT
Trigger: AGTCGGATTCATACTATTCCAACTGTTCCTATCGTG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAAGCCACAGCACCTTaGCTAAGTATTTCCTCGATT +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSKATAP*LSISSI
Trigger: AATCGAGGAAATACTTAGCCAAGGTGCTGTGGCTTT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAAGCTTCATGGATCCTaGAACGCTGAAGTCAAAATC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYKLHGS*NAEVKI
Trigger: GATTTTGACTTCAGCGTTCCAGGATCCATGAAGCTT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCATTTGGGGAGTTGCTTaGTCTTGGCCTCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFIWGVA*SWPPRF
Trigger: AAATCTTGGAGGCCAAGACCAAGCAACTCCCCAAAT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGTTCATGACGAGGTATaGGTAGATCTTGCCATTGTG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFVHDEV*VDLAIV
Trigger: CACAATGGCAAGATCTACCCATACCTCGTCATGAAC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGAGTTAAAAATGGATaGAAGGGAGCTGTTCGTACA +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSRVKNG*KGAVRT
Trigger: TGTACGAACAGCTCCCTTCCATCCATTTTTAACTCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAACTGAGGAGATGACGTaGCATTCTCAAAATTTTCAC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLTEEMT*HSQNFH
Trigger: GTGAAAATTTTGAGAATGTCACGTCATCTCCTCAGT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATACTGAGGAGATGACGTaGCATTCTCAAAATTTTCAC +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYTEEMT*HSQNFH
Trigger: GTGAAAATTTTGAGAATGTCACGTCATCTCCTCAGT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCAATTGTGTGGAATTTaGGAACGAAAACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFQLCGI*ERKPPA
Trigger: TGCTGGAGGTTTTCGTTCTCAAATTCCACACAATTG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACAGTTAAGTCCATCATaGCAAAGAGAAGTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQQLSPS*QREVLS
Trigger: TGAAAGCACTTCTCTTTGTCATGATGGACTTAACTG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCACAAAATTTATCATTaGAGGAATTTGGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYHKIYH*RNLGRA
Trigger: GGCTCTTCCCAAATTCCTTCAATGATAAATTTTGTG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACACAAAATTTATCATTaGAGGAATTTGGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIHKIYH*RNLGRA
Trigger: GGCTCTTCCCAAATTCCTTCAATGATAAATTTTGTG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGATTTTGGCATCTGGTaGTTTTTCGATGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFDFGIW*FFDEGC
Trigger: ACATCCCTCATCGAAAAATCACCAGATGCCAAAATC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAAGCATAGCGTTATTTaGACTGGGATCATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFKHSVI*TGIMLR
Trigger: TCTCAGCATGATCCCAGTTCAAATAACGCTATGCTT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAATAATGGGCAATTCTaGCAACACTTTCAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTINNGQF*QHFQRK
Trigger: CTTTCTCTGAAAGTGTTGGCAGAATTGCCCATTATT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAATAATGGGCAATTCTaGCAACACTTTCAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYNNGQF*QHFQRK
Trigger: CTTTCTCTGAAAGTGTTGGCAGAATTGCCCATTATT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGCAGGATTCAAGATATaGTGCAGAACTTTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPAGFKI*CRTLAF
Trigger: AAAAGCTAAAGTTCTGCAGCATATCTTGAATCCTGC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTACACCTTGAAGTGTTaGACTATCAGGTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFYTLKC*TIRCRM
Trigger: CATTCTGCACCTGATAGTGCAACACTTCAAGGTGTA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATTTGGCTTTATCCATTaGCTTTTCATAGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKFGFIH*LFIGFL
Trigger: CAAGAATCCTATGAAAAGGCAATGGATAAAGCCAAA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGACGAAGATGTTCGTTaGTTGGTATTCTATGAATTA +
Preference number: 4 (lower is better)
Translates to: FLHANYQENNRNPVKLWGDEDVR*LVFYEL
Trigger: TAATTCATAGAATACCAACCAACGAACATCTTCGTC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACTGAGCCAATTAGTATaGATTCATCAAACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: ISNRFAQHRHSSASSKTILSQLV*IHQTAC
Trigger: ACAAGCTGTTTGATGAATCCATACTAATTGGCTCAG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGATGTAATAATGCGTTaGCTTTGGCATCAGAAACTC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLDVIMR*LWHQKL
Trigger: GAGTTTCTGATGCCAAAGCCAACGCATTATTACATC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCAGACCGGAGAATCCTaGCTTCTTAAAAGATTATTT +
Preference number: 4 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSQTGES*LLKRLF
Trigger: AAATAATCTTTTAAGAAGCCAGGATTCTCCGGTCTG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCAGGATTCAAGATATaGTGCAGAACTTTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAGFKI*CRTLAF
Trigger: AAAAGCTAAAGTTCTGCAGCATATCTTGAATCCTGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGAACATTCCCTTCAGTaGATAAAATTCGGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFEHSLQ*IKFGCH
Trigger: ATGACAGCCGAATTTTATGCACTGAAGGGAATGTTC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACAATTTGAAAGTAACTaGAGCATTCCTTTCACCATC +
Preference number: 4 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSQFESN*SIPFTI
Trigger: GATGGTGAAAGGAATGCTCCAGTTACTTTCAAATTG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACAATTTGAAAGTAACTaGAGCATTCCTTTCACCATC +
Preference number: 4 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLQFESN*SIPFTI
Trigger: GATGGTGAAAGGAATGCTCCAGTTACTTTCAAATTG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGATGTAATAATGCGTTaGCTTTGGCATCAGAAACTC +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTDVIMR*LWHQKL
Trigger: GAGTTTCTGATGCCAAAGCCAACGCATTATTACATC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTAGAGTTAAAAATGGATaGAAGGGAGCTGTTCGTACA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTRVKNG*KGAVRT
Trigger: TGTACGAACAGCTCCCTTCCATCCATTTTTAACTCT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR GCA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTTTGGCTTTATCCATTaGCTTTTCATAGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYFGFIH*LFIGFL
Trigger: CAAGAATCCTATGAAAAGGCAATGGATAAAGCCAAA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CCA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGACGAAGATGTTCGTTaGTTGGTATTCTATGAATTA +
Preference number: 4 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQDEDVR*LVFYEL
Trigger: TAATTCATAGAATACCAACCAACGAACATCTTCGTC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR TCA 90 bp TGCTACGATAGCTTCTTAAAGGATGTCTTTTTCTTTGCACAAATACTGGAAATGTTTTTCCATACTGGATaGTCGCTGAAGCTGATGCAT +
Preference number: 4 (lower is better)
Translates to: CYDSFLKDVFFFAQILEMFFHTG*SLKLMH
Trigger: ATGCATCAGCTTCAGCGATCATCCAGTATGGAAAAA...CATTTCCAGTATTTGTGCAAAGAAAAAGACATCCTTTAAGAAGCTATCGTAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CCA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGACGAAGATGTTCGTTaGTTGGTATTCTATGAATTA +
Preference number: 4 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTDEDVR*LVFYEL
Trigger: TAATTCATAGAATACCAACCAACGAACATCTTCGTC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
3UTR CAA 72 bp TCACTGTACATCCTCTGGGTCACAATTTTGTATTTTTaGGTTTGCTACGATAGCTTCTTAAAGGATGTCTTT +
Preference number: 4 (lower is better)
Translates to: SLYILWVTILYF*VCYDSFLKDVF
Trigger: AAAGACATCCTTTAAGAAGCTATCGTAGCAAACCAAAAAATACAAAATTGTGACCCAGAGGATGTACAGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS CCA 90 bp CTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTaGCGGCCACAGTCACAGCCAGGGGTGCCAGGCGGGGTCCATGCG +
Preference number: 5 (lower is better)
Translates to: LRAQSPERPSHSGWP*RPQSQPGVPGGVHA
Trigger: CGCATGGACCCCGCCTGGCACCCCTGGCTGTGACTGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGACCTGGTGGCTGGCTaGGGTTCCCCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTDLVAG*GSPRLH
Trigger: GTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGTC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGACCTGGTGGCTGGCTaGGGTTCCCCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWDLVAG*GSPRLH
Trigger: GTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGTC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GCCGTGGCGGCCACAGTCACAGCCAGGGGTGCCAGGCGGGGTCCATaGGGCACAGATTGTCCAGGCTGTTTGCCGCGGCCACCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: AVAATVTARGARRGP*GTDCPGCLPRPPGC
Trigger: ACACCCTGGTGGCCGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGACCCCGCCTGGCACCCCTGGCTGTGACTGTGGCCGCCACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TGCTGGGCTGCCTGTAGGAGAGGCGTGTGCACGTGGGACACTACGTaGGGCAGCCGCCGCCACTCGCGGATGGCCAGGCTGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: CWAACRRGVCTWDTT*GSRRHSRMARLLAI
Trigger: GATGGCCAGCAGCCTGGCCATCCGCGAGTGGCGGCGGCTGCCCCACGTAGTGTCCCACGTGCACACGCCTCTCCTACAGGCAGCCCAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATCCCGGGGCTCCTGCTaGACATGTGTGACCATGGCG +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSRGSC*TCVTMA
Trigger: CGCCATGGTCACACATGTCAAGCAGGAGCCCCGGGA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTGCAGCGCCCACTCCTaGAGCATGCTGCGCGGCACC +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPCSAHS*SMLRGT
Trigger: GGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGCA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTGCAGCGCCCACTCCTaGAGCATGCTGCGCGGCACC +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWCSAHS*SMLRGT
Trigger: GGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGCA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACTCTCCTGCTCGCTCTaGGAACGGATGCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLSCSL*ERMQST
Trigger: GGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAAGTCGGGCTGCAGGTaGTCCACACACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATKSGCR*STHSSS
Trigger: GCTGGAGCTGTGTGTGGACAACCTGCAGCCCGACTT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAGGCCAATCTGTGCGTaGGCAGGCTGGTGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTRPICA*AGWCRS
Trigger: GCTCCGACACCAGCCTGCCAACGCACAGATTGGCCT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCGGGAGCATGGCTCCTaGGCAGCTGGTGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWREHGS*AAGANG
Trigger: CCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCCG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAGGGTCGGATGGGGATaGGCGGCACGCACTGGGACA +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPRVGWG*AARTGT
Trigger: TGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGGGTTGGAGACCCGTTaGGAGGAGGCGGACGGAAGC +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWGLETR*EEADGS
Trigger: GCTTCCGTCCGCCTCCTCCAAACGGGTCTCCAACCC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS TCA 90 bp CGTCGATGTTCTTGGCGAAGAGCTGGACGGCGAGGGAGAGGTCGCTaGGGGGCAGGTGCTGGCGGACATGGTGCACGAGGTCGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: RRCSWRRAGRRGRGR*GAGAGGHGARGRPA
Trigger: CGCTGGCCGACCTCGTGCACCATGTCCGCCAGCACCTGCCCCTCAGCGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGAACATCGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATTGGAGAGCTCCACGTaGGAGCCCATTTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLESST*EPISGR
Trigger: CCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCAA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAAGTCGGGCTGCAGGTaGTCCACACACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTKSGCR*STHSSS
Trigger: GCTGGAGCTGTGTGTGGACAACCTGCAGCCCGACTT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGATGAACCTGTTGGGGTaGGCAGCCAGCACATCCCGC +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTMNLLG*AASTSR
Trigger: GCGGGATGTGCTGGCTGCCAACCCCAACAGGTTCAT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATTGGGCTCCTTCCAGTaGGTGGCTGCCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLGSFQ*VAAMFS
Trigger: GGAGAACATGGCAGCCACCAACTGGAAGGAGCCCAA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAATGAGGCGGCGCAGCTaGCTGTTGCGGTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATMRRRS*LLRFLL
Trigger: CAACAAGAACCGCAACAGCAAGCTGCGCCGCCTCAT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTCCGGCTGCTGGTCCTaGATCCTCTGCAGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSGCWS*ILCSSH
Trigger: GTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGGA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAGCTTGAGTTCGGACTaGGGCCACATGTCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTSLSSD*GHMSGR
Trigger: GCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTCCCGGGGCTCCTGCTaGACATGTGTGACCATGGCG +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSRGSC*TCVTMA
Trigger: CGCCATGGTCACACATGTCAAGCAGGAGCCCCGGGA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTTCATGGCAGTCCAGTaGGACACCCGCCAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPFMAVQ*DTRQAH
Trigger: GTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGAA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTTTCGCCAGGCCCTGTaGGAGCTGCCTGAGAACCTC +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTFRQAL*ELPENL
Trigger: GAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAAA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGATTGTCCAGGCTGTTaGCCGCGGCCACCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWDCPGC*PRPPGC
Trigger: ACACCCTGGTGGCCGCGGCAAACAGCCTGGACAATC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGATTGTCCAGGCTGTTaGCCGCGGCCACCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPDCPGC*PRPPGC
Trigger: ACACCCTGGTGGCCGCGGCAAACAGCCTGGACAATC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp CCCTCCTCCACAATGATCTTCCGGGTCCAGTGGGTCAGCATCTGGTaGCCGTCCTCCATCCTGGCCGGCACCGCCGGGGTCAGAATGGCC +
Preference number: 5 (lower is better)
Translates to: PSSTMIFRVQWVSIW*PSSILAGTAGVRMA
Trigger: GGCCATTCTGACCCCGGCGGTGCCGGCCAGGATGGAGGACGGGCACCAGATGCTGACCCACTGGACCCGGAAGATCATTGTGGAGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GGTATTGTCCACCACTGGACTGAAGGTGGCAGGCAGGGTAGGGTTTaGCACCCCCACTCCTCGCTCCCGGTCCCCGCTGCTCTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GIVHHWTEGGRQGRV*HPHSSLPVPAALLG
Trigger: CCCCAGGAGAGCAGCGGGGACCGGGAGCGAGGAGTGGGGGTGGCAAACCCTACCCTGCCTGCCACCTTCAGTCCAGTGGTGGACAATACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417523.5
CDS CCA 90 bp GTGCAGTGGCCTGCGCCCGCCGGGCCAGAGACTCAGAGGCTGCGCTaGAGAACATGGTCGAGACGTTGGACACATTCTCCAGGCCCACCC +
Preference number: 5 (lower is better)
Translates to: VQWPAPAGPETQRLR*RTWSRRWTHSPGPP
Trigger: GGGTGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTGGCCCGGCGGGCGCAGGCCACTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACTCACAGTCTGGCAGTaGGCCACACGGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLTVWQ*ATRMYV
Trigger: GACATACATCCGTGTGGCCAACTGCCAGACTGTGAG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGGCTTCTCCGGCCTCTaGGAGCTCACTATTGGTGGA +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTGFSGL*ELTIGG
Trigger: TCCACCAATAGTGAGCTCCAAGAGGCCGGAGAAGCC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCTCCTCTGGCCCCCTTaGTGGGTGATCACCACCACT +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPLLWPP*WVITTT
Trigger: AGTGGTGGTGATCACCCACAAAGGGGGCCAGAGGAG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAGGGTGATGAACCTGTaGGGGTTGGCAGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTRVMNL*GLAAST
Trigger: TGTGCTGGCTGCCAACCCCAACAGGTTCATCACCCT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACTTGCGGTGCCTCTCTaGGAAGTTCTCACTCACCCA +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLAVPL*EVLTHP
Trigger: TGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAAG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAAGTGTCCGCTGTACTaGCAGGCTGGGTCCACGCAG +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPKCPLY*QAGSTQ
Trigger: CTGCGTGGACCCAGCCTGCAAGTACAGCGGACACTT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACCACGCTGCAGAGGTTaGAAGCTACTGAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATPRCRG*KLLRMA
Trigger: AGCCATCCTCAGTAGCTTCAAACCTCTGCAGCGTGG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCATCACCAGCTCGCTaGTACCTGAGGTGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPASPAR*YLRWLR
Trigger: CCGAAGCCACCTCAGGTACAAGCGAGCTGGTGATGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTCCCGGGGCTCCTGCTaGACATGTGTGACCATGGCG +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSRGSC*TCVTMA
Trigger: CGCCATGGTCACACATGTCAAGCAGGAGCCCCGGGA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTTTCGCCAGGCCCTGTaGGAGCTGCCTGAGAACCTC +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPFRQAL*ELPENL
Trigger: GAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAAA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCAGGGGGAAGGTGTGGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCACCAGTTTCGCCAGGCCCTGTaGGAGCTGCCTGAGAACCTC +
Preference number: 5 (lower is better)
Translates to: PGGRCGRTWQQAGPLPHQFRQAL*ELPENL
Trigger: GAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAAA...CTGGTGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCGCCGGGCTGCGGTGTaGTGCTTCTGCACAATCTCT +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPRRAAV*CFCTIS
Trigger: AGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCG...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAACCAGGGACACCAGTaGCTGGCTGTCCATGTTCTC +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATNQGHQ*LAVHVL
Trigger: GAGAACATGGACAGCCAGCAACTGGTGTCCCTGGTT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTCGAACTGGGCGAGGTaGTGCAGGCGGGTCATGATG +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWSNWAR*CRRVMM
Trigger: CATCATGACCCGCCTGCACAACCTCGCCCAGTTCGA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTCGAACTGGGCGAGGTaGTGCAGGCGGGTCATGATG +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSNWAR*CRRVMM
Trigger: CATCATGACCCGCCTGCACAACCTCGCCCAGTTCGA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGACCAGGGTGTTCACCTaGCTTTCCCCGCCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTTRVFT*LSPPSN
Trigger: GTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGGT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAGCAGCATGTGGGCTaGGAATCAGGCTGGACGGGC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVEQHVG*ESGWTG
Trigger: GCCCGTCCAGCCTGATTCCAAGCCCACATGCTGCTC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTGTGCACCGCGGTCCTaGGGGTTGGAGACCCGTTTG +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDCAPRS*GLETRL
Trigger: CAAACGGGTCTCCAACCCCAAGGACCGCGGTGCACA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS GCA 90 bp GCCAGGCTGCTGGCCATCTCCACCAGGCGCTCGATGAAGCTGAGCTaGTGCTCCTCGGGGTGGCAGATGGCCAGGTATCCGCGGTACATG +
Preference number: 5 (lower is better)
Translates to: ARLLAISTRRSMKLS*CSSGWQMARYPRYM
Trigger: CATGTACCGCGGATACCTGGCCATCTGCCACCCCGAGGAGCAGCAGCTCAGCTTCATCGAGCGCCTGGTGGAGATGGCCAGCAGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TGCCCCTCCTCCACAATGATCTTCCGGGTCCAGTGGGTCAGCATCTaGTGCCCGTCCTCCATCCTGGCCGGCACCGCCGGGGTCAGAATG +
Preference number: 5 (lower is better)
Translates to: CPSSTMIFRVQWVSI*CPSSILAGTAGVRM
Trigger: CATTCTGACCCCGGCGGTGCCGGCCAGGATGGAGGACGGGCACCAGATGCTGACCCACTGGACCCGGAAGATCATTGTGGAGGAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GCGGCACGCACTGGGACATGGCTTCCACAAAGCAGTTCAGCGCGCTaGGCTGGCAGTCCCGCTGCACCTGGTGACTGCCGCTGCACAGAA +
Preference number: 5 (lower is better)
Translates to: AARTGTWLPQSSSAR*AGSPAAPGDCRCTE
Trigger: TTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 90 bp TCAGGACGCAGGGTCGGATGGGGATTGGCGGCACGCACTGGGACATaGCTTCCACAAAGCAGTTCAGCGCGCTGGGCTGGCAGTCCCGCT +
Preference number: 5 (lower is better)
Translates to: SGRRVGWGLAARTGT*LPQSSSARWAGSPA
Trigger: AGCGGGACTGCCAGCCCAGCGCGCTGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 90 bp CCTGCGCCCGCCGGGCCAGAGACTCAGAGGCTGCGCTGGAGAACATaGTCGAGACGTTGGACACATTCTCCAGGCCCACCCCAAACGTGC +
Preference number: 5 (lower is better)
Translates to: PAPAGPETQRLRWRT*SRRWTHSPGPPQTC
Trigger: GCACGTTTGGGGTGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTGGCCCGGCGGGCGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GCCGCGGCCACCAGGGTGTTCACCTTGCTTTCCCCGCCTTCGAACTaGGCGAGGTTGTGCAGGCGGGTCATGATGGCGGTGACGGCTTTC +
Preference number: 5 (lower is better)
Translates to: AAATRVFTLLSPPSN*ARLCRRVMMAVTAF
Trigger: GAAAGCCGTCACCGCCATCATGACCCGCCTGCACAACCTCGCCCAGTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGGTGGCCGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGTTCTCGGGGATCACTaGAGGGTTCTCAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATVLGDH*RVLKVA
Trigger: CGCTACTTTGAGAACCCTCAAGTGATCCCCGAGAAC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCTCTCCTGCTCGCTCTaGGAACGGATGCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDLSCSL*ERMQST
Trigger: GGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGCCACCAGGAAGCATTaGATCACTTCCCACGCCTGC +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPATRKH*ITSHAC
Trigger: GCAGGCGTGGGAAGTGATCAAATGCTTCCTGGTGGC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACGTCTTTTAAAGGCGTaGCGCACCGCATCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATRLLKA*RTASEA
Trigger: AGCTTCTGATGCGGTGCGCAACGCCTTTAAAAGACG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGATGAGGCGGCGCAGCTaGCTGTTGCGGTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPMRRRS*LLRFLL
Trigger: CAACAAGAACCGCAACAGCAAGCTGCGCCGCCTCAT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCTCTGCAGCTCCCACTaGATGACGACTTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTLCSSH*MTTSDR
Trigger: CCTGTCTGAAGTCGTCATCAAGTGGGAGCTGCAGAG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTCCGGCTGCTGGTCCTaGATCCTCTGCAGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVASGCWS*ILCSSH
Trigger: GTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGGA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGCCAGGTTGATGACGTaGGTGATGGACGGGAGCATG +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWARLMT*VMDGSM
Trigger: CATGCTCCCGTCCATCACCAACGTCATCAACCTGGC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGACCGGAACCAGAGGTaGTGTGTCTTCCCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWDRNQR*CVFPRY
Trigger: GTACCTGGGGAAGACACACAACCTCTGGTTCCGGTC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGACCGGAACCAGAGGTaGTGTGTCTTCCCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPDRNQR*CVFPRY
Trigger: GTACCTGGGGAAGACACACAACCTCTGGTTCCGGTC...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCTGTCTCCGAGTACTaGCACCGCTTCTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPAVSEY*HRFCHR
Trigger: TCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAGC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTGCATGCACTCGTTTTaGCCCATGACGCCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWCMHSF*PMTPAS
Trigger: GCTGGCAGGCGTCATGGGCAAAAACGAGTGCATGCA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTCGAACTGGGCGAGGTaGTGCAGGCGGGTCATGATG +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVSNWAR*CRRVMM
Trigger: CATCATGACCCGCCTGCACAACCTCGCCCAGTTCGA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGACCAGGGTGTTCACCTaGCTTTCCCCGCCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWTRVFT*LSPPSN
Trigger: GTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGGT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCCCAGCACAGAGACCTaGATGGTAGCTGCCAGTACC +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPPSTET*MVAAST
Trigger: GGTACTGGCAGCTACCATCAAGGTCTCTGTGCTGGG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTTCATGGTCACTGAGTaGCTGCCTGAAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTFMVTE*LPEGLQ
Trigger: CTGGAGCCCTTCAGGCAGCAACTCAGTGACCATGAA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS TCA 90 bp CCAGTGCCAACTCAAGGAGCCCAGCCAGCCGCTGCCACTGCCCAGTaGGGGCTCTCTGGAGGACGAGGAGCTTCCTGCCCAGAGATACGA +
Preference number: 5 (lower is better)
Translates to: PVPTQGAQPAAATAQ*GLSGGRGASCPEIR
Trigger: TCGTATCTCTGGGCAGGAAGCTCCTCGTCCTCCAGAGAGCCCTCACTGGGCAGTGGCAGCGGCTGGCTGGGCTCCTTGAGTTGGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS GCA 90 bp GTCTTGTGCAGTGGCCTGCGCCCGCCGGGCCAGAGACTCAGAGGCTaGGCTGGAGAACATGGTCGAGACGTTGGACACATTCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VLCSGLRPPGQRLRG*AGEHGRDVGHILQA
Trigger: GGCCTGGAGAATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTGGCCCGGCGGGCGCAGGCCACTGCACAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp ATGCTGCTGGGCAGGGACTCATCGTCGATGTTCTTGGCGAAGAGCTaGACGGCGAGGGAGAGGTCGCTGAGGGGCAGGTGCTGGCGGACA +
Preference number: 5 (lower is better)
Translates to: MLLGRDSSSMFLAKS*TARERSLRGRCWRT
Trigger: TGTCCGCCAGCACCTGCCCCTCAGCGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGAACATCGACGATGAGTCCCTGCCCAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTCATCGTCGATGTTCTaGGCGAAGAGCTGGACGGCG +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSSSMF*AKSWTA
Trigger: CGCCGTCCAGCTCTTCGCCAAGAACATCGACGATGA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGAGCCAAAGACCAGCTaGAACAGCTTGAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTEPKTS*NSLRYR
Trigger: CCTGTACCTCAAGCTGTTCAAGCTGGTCTTTGGCTC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATATGCTGTCAGCAGGGTaGCGTAAGGTGCGCCACAGA +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDMLSAG*RKVRHR
Trigger: TCTGTGGCGCACCTTACGCAACCCTGCTGACAGCAT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAGCCACCTCCCCGATTTaGCAAAGCTCCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATATSPI*QSSFSS
Trigger: TGAAGAAAAGGAGCTTTGCAAAATCGGGGAGGTGGC...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCTCCTCTGGCCCCCTTaGTGGGTGATCACCACCACT +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVALLWPP*WVITTT
Trigger: AGTGGTGGTGATCACCCACAAAGGGGGCCAGAGGAG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTGGGCTCCTTCCAGTaGGTGGCTGCCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLGSFQ*VAAMFS
Trigger: GGAGAACATGGCAGCCACCAACTGGAAGGAGCCCAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATATGAGGCGGCGCAGCTaGCTGTTGCGGTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDMRRRS*LLRFLL
Trigger: CAACAAGAACCGCAACAGCAAGCTGCGCCGCCTCAT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATGCAGGACGATCTTCTaGTGTATGGCGAATTTGGCG +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATCRTIF*CMANLA
Trigger: CGCCAAATTCGCCATACACAAGAAGATCGTCCTGCA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTGCTTGTCAATGGGCTaGGCGAGGAGAGAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPCLSMG*ARRESA
Trigger: AGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGCA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAAGTACTCGGCTCTGTaGGGAAAATGCTCATCAGGC +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATKYSAL*GKCSSG
Trigger: GCCTGATGAGCATTTTCCCAACAGAGCCGAGTACTT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTTGCTGCAGGCAGACTaGAGGATCATAAGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWLLQAD*RIIRVP
Trigger: CGGGACCCTTATGATCCTCAAGTCTGCCTGCAGCAA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCAGGGGGAAGGTGTGGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCACCAGTCTACATCCTCCTCTTaGGACTCGCTGTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PGGRCGRTWQQAGPLPHQSTSSS*DSLFSR
Trigger: GCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAGA...CTGGTGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGACCGGAACCAGAGGTaGTGTGTCTTCCCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVDRNQR*CVFPRY
Trigger: GTACCTGGGGAAGACACACAACCTCTGGTTCCGGTC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGGCTGTAAGCCTGCGTaGATTTGTGCAGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWGCKPA*ICAASW
Trigger: CCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTGCATGCACTCGTTTTaGCCCATGACGCCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDCMHSF*PMTPAS
Trigger: GCTGGCAGGCGTCATGGGCAAAAACGAGTGCATGCA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCTGCAGAGAAGGCTTaGTTTGCCTCCTCGGACTTG +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPAAEKA*FASSDL
Trigger: CAAGTCCGAGGAGGCAAACAAAGCCTTCTCTGCAGC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGGAAAGTAGACCGCTaGGGGATACACGCGTCCAAC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVGKVDR*GIHASN
Trigger: GTTGGACGCGTGTATCCCCAAGCGGTCTACTTTCCC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAACCAGGGACACCAGTaGCTGGCTGTCCATGTTCTC +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPNQGHQ*LAVHVL
Trigger: GAGAACATGGACAGCCAGCAACTGGTGTCCCTGGTT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAACCAGGGACACCAGTaGCTGGCTGTCCATGTTCTC +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWNQGHQ*LAVHVL
Trigger: GAGAACATGGACAGCCAGCAACTGGTGTCCCTGGTT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAAGGGGCTAGGGACATaGAGAGGGAAGAAACCCCTC +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWKGLGT*RGKKPL
Trigger: GAGGGGTTTCTTCCCTCTCAATGTCCCTAGCCCCTT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS TCA 90 bp GCAGAATGTGGACCAGCTGCGGGACGGTGTGCCCCTCCTCCACAATaGTCTTCCGGGTCCAGTGGGTCAGCATCTGGTGCCCGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: AECGPAAGRCAPPPQ*SSGSSGSASGARPP
Trigger: TGGAGGACGGGCACCAGATGCTGACCCACTGGACCCGGAAGATCATTGTGGAGGAGGGGCACACCGTCCCGCAGCTGGTCCACATTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp TCCCACTTGATGACGACTTCAGACAGGTCCACGGCCAGCCGCCTCTaGTCGATGGTGACACTGGGCGTGAAGCCCAGCCTCTGCATGGCG +
Preference number: 5 (lower is better)
Translates to: SHLMTTSDRSTASRL*SMVTLGVKPSLCMA
Trigger: CGCCATGCAGAGGCTGGGCTTCACGCCCAGTGTCACCATCGAGCAGAGGCGGCTGGCCGTGGACCTGTCTGAAGTCGTCATCAAGTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp TCAGCGCGCTGGGCTGGCAGTCCCGCTGCACCTGGTGACTGCCGCTaGACAGAAATGGACTTATCTCACCCGCGAGTGCATGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SARWAGSPAAPGDCR*TEMDLSHPRVHAAV
Trigger: GACAGCAGCATGCACTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS GCA 90 bp AGGCTGCTGGCCATCTCCACCAGGCGCTCGATGAAGCTGAGCTGCTaGTCCTCGGGGTGGCAGATGGCCAGGTATCCGCGGTACATGTTC +
Preference number: 5 (lower is better)
Translates to: RLLAISTRRSMKLSC*SSGWQMARYPRYMF
Trigger: GAACATGTACCGCGGATACCTGGCCATCTGCCACCCCGAGGAGCAGCAGCTCAGCTTCATCGAGCGCCTGGTGGAGATGGCCAGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp AGGTACTTCAGGACGCAGGGTCGGATGGGGATTGGCGGCACGCACTaGGACATGGCTTCCACAAAGCAGTTCAGCGCGCTGGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RYFRTQGRMGIGGTH*DMASTKQFSALGWQ
Trigger: CTGCCAGCCCAGCGCGCTGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCCTGAAGTACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTCCTCACGCTCCGGGTaGACTTTCACAGCAATCGTT +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSSRSG*TFTAIV
Trigger: AACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGGA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGGCTTCACCAGGTGCTTaGCATGATGTTATGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPASPGA*HDVMPH
Trigger: GTGGGGCATAACATCATGCAAAGCACCTGGTGAAGC...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAAGCATGTTCAGCCCTaGCAGGAGGTTTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWKHVQP*QEVWKE
Trigger: CTCCTTCCAAACCTCCTGCAAGGGCTGAACATGCTT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGATAGCGACTGCCCCATaGGAAACCTCTCCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTIATAP*ETSPVK
Trigger: CTTAACTGGAGAGGTTTCCAATGGGGCAGTCGCTAT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCGTCTTTTAAAGGCGTaGCGCACCGCATCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWRLLKA*RTASEA
Trigger: AGCTTCTGATGCGGTGCGCAACGCCTTTAAAAGACG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTCCTGCAGGACCTCTTaGTGGGGTTCCATGATCACC +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSCRTS*WGSMIT
Trigger: GGTGATCATGGAACCCCACAAAGAGGTCCTGCAGGA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGGCTTCTCCGGCCTCTaGGAGCTCACTATTGGTGGA +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAGFSGL*ELTIGG
Trigger: TCCACCAATAGTGAGCTCCAAGAGGCCGGAGAAGCC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTCGAGTCAGGAACTaGATCAGGGGCTCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPCRVRN*IRGSRN
Trigger: ATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGACA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTCGGGGTCCAGGACCTaGGTAATAAACACACTGGTG +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSGSRT*VINTLV
Trigger: CACCAGTGTGTTTATTACCAAGGTCCTGGACCCCGA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTTGCGGTTCTTGTTGTaGTCATGGATGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWLRFLL*SWMWWG
Trigger: CCCCCACCACATCCATGACAACAACAAGAACCGCAA...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCACAGTCATCAGCAGCTaGTCGAACCACTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPTVISS*SNHCSL
Trigger: CAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCATTCTTCCACGATTTaGACCACAGCCCGGAGGATT +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTHSSTI*TTARRI
Trigger: AATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAATG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCACTGGTTCAATTCCTaGGAGCATCGAATCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTHWFNS*EHRIQW
Trigger: CCACTGGATTCGATGCTCCAAGGAATTGAACCAGTG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGTCTGTGCCGAGAAATaGCTCAAGAACCGGCACTTT +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTVCAEK*LKNRHF
Trigger: AAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGAC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCGTGGCTCCCAGCACGTaGAGAGGGCAAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSVAPST*RGQGRR
Trigger: CCTCCTGCCTTGCCCTCTCAACGTGCTGGGAGCCAC...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS TCA 90 bp TCCAGTTGGACACCCGCCAGGCGCACTCCAGGACGAGGTAGGGGTTaGTGTGGCCTTTGGACTGACCGTACTCCGTCAGGGCTTCCCACT +
Preference number: 5 (lower is better)
Translates to: SSWTPARRTPGRGRG*CGLWTDRTPSGLPT
Trigger: AGTGGGAAGCCCTGACGGAGTACGGTCAGTCCAAAGGCCACATCAACCCCTACCTCGTCCTGGAGTGCGCCTGGCGGGTGTCCAACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp TGCAGCGCCCACTCCTTGAGCATGCTGCGCGGCACCATGTTACTCTaGACCTCCTTGAGGATGTCGCGGAGGACCTGGTGGCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: CSAHSLSMLRGTMLL*TSLRMSRRTWWLAW
Trigger: CCAAGCCAGCCACCAGGTCCTCCGCGACATCCTCAAGGAGGTTCAGAGTAACATGGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp AGCAGTTCAGCGCGCTGGGCTGGCAGTCCCGCTGCACCTGGTGACTaGCGCTGCACAGAAATGGACTTATCTCACCCGCGAGTGCATGCT +
Preference number: 5 (lower is better)
Translates to: SSSARWAGSPAAPGD*RCTEMDLSHPRVHA
Trigger: AGCATGCACTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS GCA 90 bp ATCCGTCGTGAACTGGCCTTTCAGCTTCTGAAAGACAGGGTCTTGTaGAGTGGCCTGCGCCCGCCGGGCCAGAGACTCAGAGGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: IRRELAFQLLKDRVL*SGLRPPGQRLRGCA
Trigger: AGCGCAGCCTCTGAGTCTCTGGCCCGGCGGGCGCAGGCCACTGCACAAGACCCTGTCTTTCAGAAGCTGAAAGGCCAGTTCACGACGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GTGCAGCTAGCTCTCTCCTCTGACCCTGTCGCGTACGTGGGTGCTTaGAGCTCCCCTGGCCGGGGCTTCGGAGTGACTTTCTGCATCTCT +
Preference number: 5 (lower is better)
Translates to: VQLALSSDPVAYVGA*SSPGRGFGVTFCIS
Trigger: AGAGATGCAGAAAGTCACTCCGAAGCCCCGGCCAGGGGAGCTGCAAGCACCCACGTACGCGACAGGGTCAGAGGAGAGAGCTAGCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS CCA 90 bp ATCTCCACCAGGCGCTCGATGAAGCTGAGCTGCTGCTCCTCGGGGTaGCAGATGGCCAGGTATCCGCGGTACATGTTCACCTTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: ISTRRSMKLSCCSSG*QMARYPRYMFTFQA
Trigger: GGCCTGGAAGGTGAACATGTACCGCGGATACCTGGCCATCTGCCACCCCGAGGAGCAGCAGCTCAGCTTCATCGAGCGCCTGGTGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GGCTTCCCGAGTTGGCAGCTATGGGGTCCAGGTATTGTCCACCACTaGACTGAAGGTGGCAGGCAGGGTAGGGTTTGCCACCCCCACTCC +
Preference number: 5 (lower is better)
Translates to: GFPSWQLWGPGIVHH*TEGGRQGRVCHPHS
Trigger: GGAGTGGGGGTGGCAAACCCTACCCTGCCTGCCACCTTCAGTCCAGTGGTGGACAATACCTGGACCCCATAGCTGCCAACTCGGGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417523.5
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTACGAGCTTCCGCAGTaGCTGTGCTGGTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAYELPQ*LCWFLL
Trigger: CAGGAGAAACCAGCACAGCAACTGCGGAAGCTCGTA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTGGTGAGGATGTGTTaGGCAGCAATCAGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVVVRMC*AAIRSS
Trigger: GGAGCTTCTGATTGCTGCCAAACACATCCTCACCAC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGTGGTGAGGATGTGTTaGGCAGCAATCAGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDVVRMC*AAIRSS
Trigger: GGAGCTTCTGATTGCTGCCAAACACATCCTCACCAC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCTTGTCCTTTTCTCCTaGCTTCTCGAAGGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLVLFS*LLEGRH
Trigger: GTGCCTCCCTTCGAGAAGCAAGGAGAAAAGGACAAG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCTTCACCAGGTGCTTaGCATGATGTTATGCCCCAC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVASPGA*HDVMPH
Trigger: GTGGGGCATAACATCATGCAAAGCACCTGGTGAAGC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTCTTTTCTGTAAAGTaGGGGTGTGCCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVVFSVK*GCARSW
Trigger: CCAGCTCCTGGCACACCCCAACTTTACAGAAAAGAC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTTGCTGTTGCGGTTCTaGTTGTTGTCATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTLLLRF*LLSWMW
Trigger: CCACATCCATGACAACAACAAGAACCGCAACAGCAA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCGGCGCAGCTTGCTGTaGCGGTTCTTGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVARRSLL*RFLLLS
Trigger: TGACAACAACAAGAACCGCAACAGCAAGCTGCGCCG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTTGTGTATGGCGAATTaGGCGATAATGTGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPLCMAN*AIMCAR
Trigger: CCTGGCGCACATTATCGCCAAATTCGCCATACACAA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCAGGACGATCTTCTaGTGTATGGCGAATTTGGCG +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPCRTIF*CMANLA
Trigger: CGCCAAATTCGCCATACACAAGAAGATCGTCCTGCA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGCTTCTCCACTGGAATTaGGGTCCATATCTGAATCCG +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTLLHWN*GPYLNP
Trigger: CGGATTCAGATATGGACCCAAATTCCAGTGGAGAAG...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTGCTTGTCAATGGGCTaGGCGAGGAGAGAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVACLSMG*ARRESA
Trigger: AGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGCA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCCCACGCTGCAGAGGTTaGAAGCTACTGAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAPRCRG*KLLRMA
Trigger: AGCCATCCTCAGTAGCTTCAAACCTCTGCAGCGTGG...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATACGGCTCGCAACACCTaGGTGTTTCCACATGTCATG +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDTARNT*VFPHVM
Trigger: CATGACATGTGGAAACACCAAGGTGTTGCGAGCCGT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAAGTACTCGGCTCTGTaGGGAAAATGCTCATCAGGC +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWKYSAL*GKCSSG
Trigger: GCCTGATGAGCATTTTCCCAACAGAGCCGAGTACTT...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTCCAGCTCTTCATATTaGGAGGCCACACTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTSSSSY*EATLEV
Trigger: TACTTCCAGTGTGGCCTCCAAATATGAAGAGCTGGA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGACAGCCCGGAGGATTTaGGCATCTGGTGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPTARRI*ASGDFS
Trigger: CGAAAAATCACCAGATGCCAAAATCCTCCGGGCTGT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTGGCTATCGGCCAGGTaGATGACGTTGGTGATGGAC +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAWLSAR*MTLVMD
Trigger: GTCCATCACCAACGTCATCAACCTGGCCGATAGCCA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACACTTTTCATAGGATTCTaGTGCCTGCTCAAAGAACCC +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLFIGF*CLLKEP
Trigger: GGGTTCTTTGAGCAGGCACAAGAATCCTATGAAAAG...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCACACCAATGCAGTACTaGTCGACGGCATCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPTPMQY*STASAK
Trigger: TTTGGCAGATGCCGTCGACAAGTACTGCATTGGTGT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGACACCAATGCAGTACTaGTCGACGGCATCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPTPMQY*STASAK
Trigger: TTTGGCAGATGCCGTCGACAAGTACTGCATTGGTGT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGAATTTGGGGAGTTGCTaGGTCTTGGCCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTNLGSC*VLASKI
Trigger: AATCTTGGAGGCCAAGACCAAGCAACTCCCCAAATT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGAAGAATTTGGGGAGTaGCTTGGTCTTGGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWEEFGE*LGLGLQ
Trigger: TTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp ACAAAGCAGTTCAGCGCGCTGGGCTGGCAGTCCCGCTGCACCTGGTaGCTGCCGCTGCACAGAAATGGACTTATCTCACCCGCGAGTGCA +
Preference number: 5 (lower is better)
Translates to: TKQFSALGWQSRCTW*LPLHRNGLISPASA
Trigger: TGCACTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAACTGCTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS TCA 90 bp CCAGGGAAGACAGAAGGGTGGGGTGGAGCTCTCGCTGCATGTGCATaGTTCGGCTGCAGCGCCACATGGGTGCTGTTGCTCTTATGGGCC +
Preference number: 5 (lower is better)
Translates to: PGKTEGWGGALAACA*FGCSATWVLLLLWA
Trigger: GGCCCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCCGAATCATGCACATGCAGCGAGAGCTCCACCCCACCCTTCTGTCTTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp TGGGCGAGGTTGTGCAGGCGGGTCATGATGGCGGTGACGGCTTTCTaGACCAGGGACACCAGTTGCTGGCTGTCCATGTTCTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: WARLCRRVMMAVTAF*TRDTSCWLSMFSGC
Trigger: GCAGCCAGAGAACATGGACAGCCAGCAACTGGTGTCCCTGGTTCAGAAAGCCGTCACCGCCATCATGACCCGCCTGCACAACCTCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TCGGCCAGGTTGATGACGTTGGTGATGGACGGGAGCATGGCTCCTTaGCAGCTGGTGCCAATGGGGGTGCTCTTCTCACACACGGCCAGA +
Preference number: 5 (lower is better)
Translates to: SARLMTLVMDGSMAP*QLVPMGVLFSHTAR
Trigger: TCTGGCCGTGTGTGAGAAGAGCACCCCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCCGTCCATCACCAACGTCATCAACCTGGCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GGCTCCTGCTTGACATGTGTGACCATGGCGAAGGCGGCACGGTCGTaGCTATCGGCCAGGTTGATGACGTTGGTGATGGACGGGAGCATG +
Preference number: 5 (lower is better)
Translates to: GSCLTCVTMAKAARS*LSARLMTLVMDGSM
Trigger: CATGCTCCCGTCCATCACCAACGTCATCAACCTGGCCGATAGCCACGACCGTGCCGCCTTCGCCATGGTCACACATGTCAAGCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GGGCTGGCAGTCCCGCTGCACCTGGTGACTGCCGCTGCACAGAAATaGACTTATCTCACCCGCGAGTGCATGCTGCTGTCTGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GLAVPLHLVTAAAQK*TYLTRECMLLSVRE
Trigger: CTCTCTGACAGACAGCAGCATGCACTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGACTGCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 90 bp GTGTGTCTTCCCCAGGTACTTCAGGACGCAGGGTCGGATGGGGATTaGCGGCACGCACTGGGACATGGCTTCCACAAAGCAGTTCAGCGC +
Preference number: 5 (lower is better)
Translates to: VCLPQVLQDAGSDGD*RHALGHGFHKAVQR
Trigger: GCGCTGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCCTGAAGTACCTGGGGAAGACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 90 bp GGCTTTCTGAACCAGGGACACCAGTTGCTGGCTGTCCATGTTCTCTaGCTGCCCGGCGGCCGAGAGAGGAGAGGACGTGTCCTCTTGTGT +
Preference number: 5 (lower is better)
Translates to: GFLNQGHQLLAVHVL*LPGGRERRGRVLLC
Trigger: ACACAAGAGGACACGTCCTCTCCTCTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGCCAGCAACTGGTGTCCCTGGTTCAGAAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACAAGCGGTTCACTACTTTaGGAAGCTCCTTGTAAATCT +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSGSLL*EAPCKS
Trigger: AGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGCT...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATCTCTGCTGGACAATTaGAAAGTAACTGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATSLLDN*KVTGAF
Trigger: GAATGCTCCAGTTACTTTCAAATTGTCCAGCAGAGA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTCATCGTCGATGTTCTaGGCGAAGAGCTGGACGGCG +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSSSMF*AKSWTA
Trigger: CGCCGTCCAGCTCTTCGCCAAGAACATCGACGATGA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGCCACCAGGAAGCATTaGATCACTTCCCACGCCTGC +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPATRKH*ITSHAC
Trigger: GCAGGCGTGGGAAGTGATCAAATGCTTCCTGGTGGC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATATAGCGACTGCCCCATaGGAAACCTCTCCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDIATAP*ETSPVK
Trigger: CTTAACTGGAGAGGTTTCCAATGGGGCAGTCGCTAT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGTGGAATTCAGGGCTTaGAAGAGTGCAGCGATGATT +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWVEFRA*KSAAMI
Trigger: AATCATCGCTGCACTCTTCAAAGCCCTGAATTCCAC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGCTTCTCCGGCCTCTaGGAGCTCACTATTGGTGGA +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPGFSGL*ELTIGG
Trigger: TCCACCAATAGTGAGCTCCAAGAGGCCGGAGAAGCC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCTGTTGCGGTTCTTGTaGTTGTCATGGATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLLRFL*LSWMWW
Trigger: CCACCACATCCATGACAACAACAAGAACCGCAACAG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTTGCTGTTGCGGTTCTaGTTGTTGTCATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPLLLRF*LLSWMW
Trigger: CCACATCCATGACAACAACAAGAACCGCAACAGCAA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGTGTCTGTGTGCTGCTaGTCAATGGGCTTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPVSVCC*SMGLAR
Trigger: CCTCGCCAAGCCCATTGACAAGCAGCACACAGACAC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTCGAACCACTGCAGCTaGAGTTCGGACTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPSNHCS*SSDLGH
Trigger: GTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCACGGCTCGCAACACCTaGGTGTTTCCACATGTCATG +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVATARNT*VFPHVM
Trigger: CATGACATGTGGAAACACCAAGGTGTTGCGAGCCGT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTTTTCTGAAAGTTCTTaGGTTTTGGGCGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTFSESS*VLGVLV
Trigger: GACCAGCACGCCCAAAACCAAAGAACTTTCAGAAAA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAGAGTGTCCAGAAACTaGTCGTGCCTGTTGGTTAGC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVRVSRN*SCLLVS
Trigger: GCTAACCAACAGGCACGACAAGTTTCTGGACACTCT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGCTATTCGATGACGCGTCTATGTGCGCTGTGGGCAGGAAGAGCTGGAAGGTGGTTCATGGCAGTCCAGTaGGACACCCGCCAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: GYSMTRLCALWAGRAGRWFMAVQ*DTRQAH
Trigger: GTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGAA...CCACCTTCCAGCTCTTCCTGCCCACAGCGCACATAGACGCGTCATCGAATAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCATGTCGTGCAGGCTGTaGTTCCTTCCCAGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAMSCRL*FLPRLV
Trigger: AACCAACCTGGGAAGGAACAACAGCCTGCACGACAT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGACACCAATGCAGTACTaGTCGACGGCATCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVTPMQY*STASAK
Trigger: TTTGGCAGATGCCGTCGACAAGTACTGCATTGGTGT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGGGAGTTGCTTGGTCTaGGCCTCCAAGATTTTGATC +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDGSCLV*ASKILI
Trigger: GATCAAAATCTTGGAGGCCAAGACCAAGCAACTCCC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAATTTGGGGAGTTGCTaGGTCTTGGCCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPNLGSC*VLASKI
Trigger: AATCTTGGAGGCCAAGACCAAGCAACTCCCCAAATT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCACAGTGGCCCAGGCCTaGTCACACGCAGTGAGGACA +
Preference number: 5 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSTVAQA*SHAVRT
Trigger: TGTCCTCACTGCGTGTGACAAGGCCTGGGCCACTGT...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGCATCACCAGCTCGCTaGTACCTGCTGAGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPASPAR*YLLRWL
Trigger: AAGCCACCTCAGCAGGTACAAGCGAGCTGGTGATGC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS TCA 90 bp TCGATTTGCTCTCGTTCTGATGCCGGCAGGCGTGCAGGTAGCAGGTaGTGGCAGACACGCCCAGGTGCAGCTGCCGCTCCTTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: SICSRSDAGRRAGSR*WQTRPGAAAAPSQR
Trigger: TCTTTGTGAAGGAGCGGCAGCTGCACCTGGGCGTGTCTGCCATCACCTGCTACCTGCACGCCTGCCGGCATCAGAACGAGAGCAAATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp GGGGTTCAGCAGACGCAGCAGCTGCAACACACGCTCCTCTCGCCGTaGCTCTGTGAGGCAGGCGTCGTTCATGACGAGGTATGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: GVQQTQQLQHTLLSP*LCEAGVVHDEVWVD
Trigger: ATCTACCCATACCTCGTCATGAACGACGCCTGCCTCACAGAGTCACGGCGAGAGGAGCGTGTGTTGCAGCTGCTGCGTCTGCTGAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp ACCTCCAGCATCCGCATCAGGACGTCTCTCCCATTGCCACTCTCCTaGTCGCTCTTGGAACGGATGCAGTCCACCAGGTTCAGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: TSSIRIRTSLPLPLS*SLLERMQSTRFSRS
Trigger: GCTCCTGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCCTGATGCGGATGCTGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GAGCTCTCGCTGCATGTGCATGATTCGGCTGCAGCGCCACATGGGTaGTGTTGCTCTTATGGGCCCTGGATCGCTCTTGTAGCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: ELSLHVHDSAAAPHG*CCSYGPWIALVAFP
Trigger: CGGGAACGCTACAAGAGCGATCCAGGGCCCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCCGAATCATGCACATGCAGCGAGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355540.7
ENST00000359863.8
CDS GCA 90 bp TGGGTAGATCTTGCCATTGTGTCCCCGGATGTACAGCCGCCGGGCTaGGGTGTTGTGCTTCTGCACAATCTCTACCCGGGGCATGAACCG +
Preference number: 5 (lower is better)
Translates to: WVDLAIVSPDVQPPG*GVVLLHNLYPGHEP
Trigger: CGGTTCATGCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTACATCCGGGGACACAATGGCAAGATCTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GTCTCCTTTCTCTTCTCCAAACAGGGGTTCAGCAGACGCAGCAGCTaGAACACACGCTCCTCTCGCCGTGACTCTGTGAGGCAGGCGTCG +
Preference number: 5 (lower is better)
Translates to: VSFLFSKQGFSRRSS*NTRSSRRDSVRQAS
Trigger: CGACGCCTGCCTCACAGAGTCACGGCGAGAGGAGCGTGTGTTGCAGCTGCTGCGTCTGCTGAACCCCTGTTTGGAGAAGAGAAAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGTCTCTGCTGGACAATTaGAAAGTAACTGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTSLLDN*KVTGAF
Trigger: GAATGCTCCAGTTACTTTCAAATTGTCCAGCAGAGA...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTCGACAGTCTGTGACTaGGAATGTCTGCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSTVCD*ECLLVF
Trigger: GAAGACAAGCAGACATTCCAAGTCACAGACTGTCGA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCCACACACCAAGGTTTaGACCAAACTTCGACAGTCT +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVPHTKV*TKLRQS
Trigger: AGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTGG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCATAGCGACTGCCCCATaGGAAACCTCTCCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAIATAP*ETSPVK
Trigger: CTTAACTGGAGAGGTTTCCAATGGGGCAGTCGCTAT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTCTTGGAGCTCACTATaGGTGGAATTCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDSWSSL*VEFRAL
Trigger: CAAAGCCCTGAATTCCACCAATAGTGAGCTCCAAGA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCACCACTTCCATCCACTaGCGCAGATGTTGCATCATC +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVATTSIH*RRCCII
Trigger: GATGATGCAACATCTGCGCAAGTGGATGGAAGTGGT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTGCTGTTGCGGTTCTaGTTGTTGTCATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLLLRF*LLSWMW
Trigger: CCACATCCATGACAACAACAAGAACCGCAACAGCAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAGGATGAGACAGAATaGACTCCTTCTCCACTGGAA +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVEDETE*TPSPLE
Trigger: TTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCTC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCATAGTTCACTTGGTTaGGCTGCTCCACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDHSSLG*AAPQSS
Trigger: TGATGACTGTGGAGCAGCCAAACCAAGTGAACTATG...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAAGTACTCGGCTCTGTaGGGAAAATGCTCATCAGGC +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAKYSAL*GKCSSG
Trigger: GCCTGATGAGCATTTTCCCAACAGAGCCGAGTACTT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGATTGGGGAGTTATTCTaGACCCATTCTTCCACGATT +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTIGELF*THSSTI
Trigger: AATCGTGGAAGAATGGGTCAAGAATAACTCCCCAAT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTACATTGACCAGTCCTaGTTTCCGGGCGATTTTTCC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVYIDQS*FPGDFS
Trigger: GGAAAAATCGCCCGGAAACAAGGACTGGTCAATGTA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGAAGAATTTGGGGAGTaGCTTGGTCTTGGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAEEFGE*LGLGLQ
Trigger: TTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATAATAATGCGTTGGCTTaGGCATCAGAAACTCCCCAG +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDNNALA*ASETPQ
Trigger: CTGGGGAGTTTCTGATGCCAAAGCCAACGCATTATT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAGAAACTCAGAAATGTaGGGCGTGAGTCGAAATGGG +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVRNSEM*GVSRNG
Trigger: CCCATTTCGACTCACGCCCAACATTTCTGAGTTTCT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGCAGCGCACGCTGTCACCAAGAGGCTACGCTGAGGAGCCCACACTGTCTCTGGCCAGACTCCAGATCCTaGATCTTTCCACGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: GSARCHQEATLRSPHCLWPDSRS*IFPRGA
Trigger: AGCTCCACGTGGAAAGATCAAGGATCTGGAGTCTGG...CCAGAGACAGTGTGGGCTCCTCAGCGTAGCCTCTTGGTGACAGCGTGCGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTCACCGGTTGGTTCTTaGATACTCCTCACCGATGCA +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVASPVGS*ILLTDA
Trigger: TGCATCGGTGAGGAGTATCAAAGAACCAACCGGTGA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS TCA 90 bp GCATGGGCAGGTACGGCAAAAGCGAGCTCAGCCGCACAGGGACGGTaGGACACAGCTCCACAAAGAGGTCCTTCATGTGCTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: AWAGTAKASSAAQGR*DTAPQRGPSCAACA
Trigger: TGCACAAGCAGCACATGAAGGACCTCTTTGTGGAGCTGTGTCTCACCGTCCCTGTGCGGCTGAGCTCGCTTTTGCCGTACCTGCCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp GGAATGGACTCCCCGCCTCGATCAGCATCGCCCGCTCCGTTTTCATaGCAACCTCTAGCAAAGGCTTCACCAGTGTCTGAGGAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: GMDSPPRSASPAPFS*QPLAKASPVSEEQP
Trigger: CGGCTGCTCCTCAGACACTGGTGAAGCCTTTGCTAGAGGTTGTCATGAAAACGGAGCGGGCGATGCTGATCGAGGCGGGGAGTCCATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp TGGACCCACGTCTTCTCTGCCAGCGTCGTGGAAATGTGGCACAGCTaGACGAAAGCGCTGAGCAGCGCTCCAGTCTTCACCTCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: WTHVFSASVVEMWHS*TKALSSAPVFTSRR
Trigger: TCTCCGAGAGGTGAAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTCCACGACGCTGGCAGAGAAGACGTGGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp GGAACGCTGAAGTCAAAATCCGTCGTGAACTGGCCTTTCAGCTTCTaGAAGACAGGGTCTTGTGCAGTGGCCTGCGCCCGCCGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GTLKSKSVVNWPFSF*KTGSCAVACARRAR
Trigger: TCTGGCCCGGCGGGCGCAGGCCACTGCACAAGACCCTGTCTTTCAGAAGCTGAAAGGCCAGTTCACGACGGATTTTGACTTCAGCGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp GCCCTTCTTGGCGCAGCGCTGCTTGTAGATCTCCACAAGGGAAAGTaGAGAGGGGTTGTCCTCCACGAGGCGCATCTGTGGGGAAACTGC +
Preference number: 5 (lower is better)
Translates to: ALLGAALLVDLHKGK*RGVVLHEAHLWGNC
Trigger: GCAGTTTCCCCACAGATGCGCCTCGTGGAGGACAACCCCTCTTCACTTTCCCTTGTGGAGATCTACAAGCAGCGCTGCGCCAAGAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp GGCCGGAGACCCCGATGGTGGTCAGAAACTCAGAAATGTTGGGCGTaGGTCGAAATGGGACAGGACGGTTGGCATCCAGGTCTCCAGTCG +
Preference number: 5 (lower is better)
Translates to: GRRPRWWSETQKCWA*VEMGQDGWHPGLQS
Trigger: CGACTGGAGACCTGGATGCCAACCGTCCTGTCCCATTTCGACTCACGCCCAACATTTCTGAGTTTCTGACCACCATCGGGGTCTCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp TTTGCCCTTCTCCAGTGCTCATCACCAAGCACTCCTGGGCAGGGCTaGTGTCTCCTTGGAGCAGTCGGGCCATCATGCACTGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: FALLQCSSPSTPGQG*CLLGAVGPSCTGFS
Trigger: GCTGAAGCCAGTGCATGATGGCCCGACTGCTCCAAGGAGACATCAGCCCTGCCCAGGAGTGCTTGGTGATGAGCACTGGAGAAGGGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482799.3
CDS GCA 90 bp GGACGTCTCTCCCATTGCCACTCTCCTGCTCGCTCTTGGAACGGATaGAGTCCACCAGGTTCAGCAGGAGCTTGCAGGACATGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: GRLSHCHSPARSWNG*SPPGSAGACRTWSG
Trigger: TCCAGACCATGTCCTGCAAGCTCCTGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp TTGCCATTGTGTCCCCGGATGTACAGCCGCCGGGCTGCGGTGTTGTaGTTCTGCACAATCTCTACCCGGGGCATGAACCGTGCAATCTTG +
Preference number: 5 (lower is better)
Translates to: LPLCPRMYSRRAAVL*FCTISTRGMNRAIL
Trigger: CAAGATTGCACGGTTCATGCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTACATCCGGGGACACAATGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GGGCTTCGGAGTGACTTTCTGCATCTCTTCTTCTCAAGTCACCAGTaGCAACTCAAGGAGCCCAGCCAGCCGCTGCCACTGCCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: GLRSDFLHLFFSSHQ*QLKEPSQPLPLPSE
Trigger: CTCACTGGGCAGTGGCAGCGGCTGGCTGGGCTCCTTGAGTTGGCACTGGTGACTTGAGAAGAAGAGATGCAGAAAGTCACTCCGAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS CCA 90 bp CGGATGCAGTCCACCAGGTTCAGCAGGAGCTTGCAGGACATGGTCTaGATGCTGCTGGGCAGGGACTCATCGTCGATGTTCTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: RMQSTRFSRSLQDMV*MLLGRDSSSMFLAK
Trigger: CTTCGCCAAGAACATCGACGATGAGTCCCTGCCCAGCAGCATCCAGACCATGTCCTGCAAGCTCCTGCTGAACCTGGTGGACTGCATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TCCGCATCAGGACGTCTCTCCCATTGCCACTCTCCTGCTCGCTCTTaGAACGGATGCAGTCCACCAGGTTCAGCAGGAGCTTGCAGGACA +
Preference number: 5 (lower is better)
Translates to: SASGRLSHCHSPARS*NGCSPPGSAGACRT
Trigger: TGTCCTGCAAGCTCCTGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCCTGATGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CGGTGCCTCTCTTGGAAGTTCTCACTCACCCACACACGTCGCAACTaGCTCACCAGAGAGTGCTGGCTGGCCAGCCAGGAGTCATCGTTT +
Preference number: 5 (lower is better)
Translates to: RCLSWKFSLTHTRRN*LTRECWLASQESSF
Trigger: AAACGATGACTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCAGTTGCGACGTGTGTGGGTGAGTGAGAACTTCCAAGAGAGGCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TGCTCATCAGGCGCGAGAGAAGGCTGTGGACGGCTCGCAACACCTTaGTGTTTCCACATGTCATGCAGGCGGCAATTCCACGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: CSSGAREGCGRLATP*CFHMSCRRQFHAAE
Trigger: CTCTGCAGCGTGGAATTGCCGCCTGCATGACATGTGGAAACACCAAGGTGTTGCGAGCCGTCCACAGCCTTCTCTCGCGCCTGATGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp AGAGGTTGTGTGTCTTCCCCAGGTACTTCAGGACGCAGGGTCGGATaGGGATTGGCGGCACGCACTGGGACATGGCTTCCACAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: RGCVSSPGTSGRRVG*GLAARTGTWLPQSS
Trigger: ACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCCTGAAGTACCTGGGGAAGACACACAACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 90 bp GCTGCCGCTCCTTCACAAAGATGTTCTCCAGGTAGTCGCCCCACATaGCCCAGGCTTTCACCAGCACATCGTGCATCTGCACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: AAAPSQRCSPGSRPT*PRLSPAHRASAQLQ
Trigger: CTGCAGCTGTGCAGATGCACGATGTGCTGGTGAAAGCCTGGGCCATGTGGGGCGACTACCTGGAGAACATCTTTGTGAAGGAGCGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CAGGCAGGTGAGCAGCTGTGGGATCCAGGCCAGCCACTGGATGGGTaGCACACCAATGCAGTACTTGTCGACGGCATCTGCCAAAGTGTT +
Preference number: 5 (lower is better)
Translates to: QAGEQLWDPGQPLDG*HTNAVLVDGICQSV
Trigger: AACACTTTGGCAGATGCCGTCGACAAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTGGCCTGGATCCCACAGCTGCTCACCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GGGCCAGAGACTCAGAGGCTGCGCTGGAGAACATGGTCGAGACGTTaGACACATTCTCCAGGCCCACCCCAAACGTGCTCACCAACTTCT +
Preference number: 5 (lower is better)
Translates to: GPETQRLRWRTWSRR*THSPGPPQTCSPTS
Trigger: AGAAGTTGGTGAGCACGTTTGGGGTGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CTGAGCAGCGCTCCAGTCTATGAACAGAAAGACAACAGGCTGAGATaGCCACGGGCTGGGGGTGCCTCGCACAACCACGCTCAGAAGACA +
Preference number: 5 (lower is better)
Translates to: LSSAPVYEQKDNRLR*PRAGGASHNHAQKT
Trigger: TGTCTTCTGAGCGTGGTTGTGCGAGGCACCCCCAGCCCGTGGCCATCTCAGCCTGTTGTCTTTCTGTTCATAGACTGGAGCGCTGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480695.1
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGAGCGGTTCACTACTTTaGGAAGCTCCTTGTAAATCT +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPSGSLL*EAPCKS
Trigger: AGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGCT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCTCTCTGCTGGACAATTaGAAAGTAACTGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPSLLDN*KVTGAF
Trigger: GAATGCTCCAGTTACTTTCAAATTGTCCAGCAGAGA...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGGTTTGGAAGATTTCTTaGAACGTTAAGGGGTTCATC +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTVWKIS*NVKGFI
Trigger: GATGAACCCCTTAACGTTCAAAGAAATCTTCCAAAC...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATCCACGATAAGGGACCGTAGTTaGGAAGATTTCTTTGAACGT +
Preference number: 5 (lower is better)
Translates to: RSGCVWRSRRVAWPRGSTIRDRS*EDFFER
Trigger: ACGTTCAAAGAAATCTTCCAAACTACGGTCCCTTAT...CGTGGATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGAGCCAAAGACCAGCTaGAACAGCTTGAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPEPKTS*NSLRYR
Trigger: CCTGTACCTCAAGCTGTTCAAGCTGGTCTTTGGCTC...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCCATATGTGTGTGGATTaGATCGACTTCTATGGTAGC +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPHMCVD*IDFYGS
Trigger: GCTACCATAGAAGTCGATCAAATCCACACACATATG...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCATTCCCATAGTTCACTaGGTTTGGCTGCTCCACAGT +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAIPIVH*VWLLHS
Trigger: ACTGTGGAGCAGCCAAACCAAGTGAACTATGGGAAT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTAGGGTCGGATGGGGATaGGCGGCACGCACTGGGACA +
Preference number: 5 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLRVGWG*AARTGT
Trigger: TGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCT...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAGGGTCGGATGGGGATaGGCGGCACGCACTGGGACA +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRRVGWG*AARTGT
Trigger: TGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGATGTCGTGCAGGCTGTaGTTCCTTCCCAGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPMSCRL*FLPRLV
Trigger: AACCAACCTGGGAAGGAACAACAGCCTGCACGACAT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCATATCCAGAGCTACATaGACCAGTCCTTGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAISRAT*TSPCFR
Trigger: CCGGAAACAAGGACTGGTCAATGTAGCTCTGGATAT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCAGAGATGCATGCACTCGTTTTaGCCCATGACGCCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: KESQGLEKVLWPAAEVQRCMHSF*PMTPAS
Trigger: GCTGGCAGGCGTCATGGGCAAAAACGAGTGCATGCA...TCTCTGGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp GCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGGCGGCCACATTGGCCTCCAAGATTTaGATCCACTTTTTCAACTTA +
Preference number: 5 (lower is better)
Translates to: AGSEPGAPFTFRVAVAATLASKI*IHFFNL
Trigger: TAAGTTGAAAAAGTGGATCAAAATCTTGGAGGCCAA...TGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCAATAATGCGTTGGCTTaGGCATCAGAAACTCCCCAG +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVANNALA*ASETPQ
Trigger: CTGGGGAGTTTCTGATGCCAAAGCCAACGCATTATT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCCGCCGGGCTGCGGTGTaGTGCTTCTGCACAATCTCT +
Preference number: 5 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPRRAAV*CFCTIS
Trigger: AGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCG...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGAAAAACAAGTGCCTCTaGGTGGTCTCCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVKNKCL*VVSFLF
Trigger: GAAGAGAAAGGAGACCACCAAGAGGCACTTGTTTTT...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGTACAGCCTAAAACTTaGTGCTCAGAGAAAAACCAG +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWVQPKT*CSEKNQ
Trigger: CTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTAC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGTACAGAGTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACATCAGTCCCTCGGCCTaGACCTGTGAGCAGCATGTG +
Preference number: 5 (lower is better)
Translates to: GTECFMLSLRACFVYTPHISPSA*TCEQHV
Trigger: CACATGCTGCTCACAGGTCAAGGCCGAGGGACTGAT...GTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCACTCTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGCACGGTGACTCTCTTTaGTCCTTTTTCAGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWHGDSL*SFFSFN
Trigger: GTTAAAGCTGAAAAAGGACAAAAGAGAGTCACCGTG...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAAACTCCACATGTCCTaGAGTGTCCTGGAGAGACCC +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPKLHMS*SVLERP
Trigger: GGGTCTCTCCAGGACACTCAAGGACATGTGGAGTTT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS TCA 90 bp CGTGCTTGTTGTCCTCCAGGCTCATCATGGCCACCAGGAAGCATTTaGTCACTTCCCACGCCTGCCTCCGGTAGTAGGGCTCAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: RACCPPGSSWPPGSI*SLPTPASGSRAQCW
Trigger: CCAACACTGAGCCCTACTACCGGAGGCAGGCGTGGGAAGTGATCAAATGCTTCCTGGTGGCCATGATGAGCCTGGAGGACAACAAGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp AGCTCGCTTGTACCTGAGGTGGCTTCGGTGCTTCCTGACGCTGCCTaGGGGTTTAAATGCTCCCGGACCATCTTCTGCAGGGAGCGCATA +
Preference number: 5 (lower is better)
Translates to: SSLVPEVASVLPDAA*GFKCSRTIFCRERI
Trigger: TATGCGCTCCCTGCAGAAGATGGTCCGGGAGCATTTAAACCCTCAGGCAGCGTCAGGAAGCACCGAAGCCACCTCAGGTACAAGCGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS TCA 90 bp TCGCTTGTACCTGCTGAGGTGGCTTCGGTGCTTCCTGACGCTGCCTaGGGGTTTAAATGCTCCCGGACCATCTTCTGCAGGGAGCGCATA +
Preference number: 5 (lower is better)
Translates to: SLVPAEVASVLPDAA*GFKCSRTIFCRERI
Trigger: TATGCGCTCCCTGCAGAAGATGGTCCGGGAGCATTTAAACCCTCAGGCAGCGTCAGGAAGCACCGAAGCCACCTCAGCAGGTACAAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS TCA 90 bp TCGCGTACGTGGGTGCTTGCAGCTCCCCTGGCCGGGGCTTCGGAGTaGCTTTCTGCATCTCTTCTTCTCAAGTCACCAGTGCCAACTCAA +
Preference number: 5 (lower is better)
Translates to: SRTWVLAAPLAGASE*LSASLLLKSPVPTQ
Trigger: TTGAGTTGGCACTGGTGACTTGAGAAGAAGAGATGCAGAAAGTCACTCCGAAGCCCCGGCCAGGGGAGCTGCAAGCACCCACGTACGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS TCA 90 bp AATGTGGCACAGCTGAACGAAAGCGCTGAGCAGCGCTCCAGTCTATaGACAGAAAGACAACAGGCTGAGATGGCCACGGGCTGGGGGTGC +
Preference number: 5 (lower is better)
Translates to: NVAQLNESAEQRSSL*TERQQAEMATGWGC
Trigger: GCACCCCCAGCCCGTGGCCATCTCAGCCTGTTGTCTTTCTGTTCATAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480695.1
CDS GCA 90 bp TCGAGCCATTTTCTTCACTGTGAAACATGGCTGTGCTGGGCTGGCTaGCCACCTGGTAGCAAGGCAGCAAGAAAGGGCCACACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SSHFLHCETWLCWAG*PPGSKAARKGHTAG
Trigger: CCCAGCAGTGTGGCCCTTTCTTGCTGCCTTGCTACCAGGTGGGCAGCCAGCCCAGCACAGCCATGTTTCACAGTGAAGAAAATGGCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp AGCTTGGGCTCCTTCCAGTTGGTGGCTGCCATGTTCTCCTTGCGGTaGCTCTCTTGGAAGTTCTCACTCACCCACACACGTCGCAACTGG +
Preference number: 5 (lower is better)
Translates to: SLGSFQLVAAMFSLR*LSWKFSLTHTRRNW
Trigger: CCAGTTGCGACGTGTGTGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAAGGAGAACATGGCAGCCACCAACTGGAAGGAGCCCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp ATGGGCAGTCGGTTCCTCCAGGTCTTCACCACCGTCTTCATGTCGTaGAGGCTGTTGTTCCTTCCCAGGTTGGTTGGCTGTAAGCCTGCG +
Preference number: 5 (lower is better)
Translates to: MGSRFLQVFTTVFMS*RLLFLPRLVGCKPA
Trigger: CGCAGGCTTACAGCCAACCAACCTGGGAAGGAACAACAGCCTGCACGACATGAAGACGGTGGTGAAGACCTGGAGGAACCGACTGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TGGAACGGATGCAGTCCACCAGGTTCAGCAGGAGCTTGCAGGACATaGTCTGGATGCTGCTGGGCAGGGACTCATCGTCGATGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: WNGCSPPGSAGACRT*SGCCWAGTHRRCSW
Trigger: CCAAGAACATCGACGATGAGTCCCTGCCCAGCAGCATCCAGACCATGTCCTGCAAGCTCCTGCTGAACCTGGTGGACTGCATCCGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CTCGGCTCTGTTGGGAAAATGCTCATCAGGCGCGAGAGAAGGCTGTaGACGGCTCGCAACACCTTGGTGTTTCCACATGTCATGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LGSVGKMLIRRERRL*TARNTLVFPHVMQA
Trigger: CGCCTGCATGACATGTGGAAACACCAAGGTGTTGCGAGCCGTCCACAGCCTTCTCTCGCGCCTGATGAGCATTTTCCCAACAGAGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTTCTTTTGGGCTGGTTaGCTTCTCAAGAGAAAAGTA +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPFFWAG*LLKRKV
Trigger: TACTTTTCTCTTGAGAAGCAAACCAGCCCAAAAGAA...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGGGTGGCCTGAACTGTTaGTGTAGCTCAATAATTATT +
Preference number: 5 (lower is better)
Translates to: LNPKWMRVALPQGGLAPWGGLNC*CSSIII
Trigger: AATAATTATTGAGCTACACAAACAGTTCAGGCCACC...CCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCAAAATGATGAATTTCTaGTGTGATCGGTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: PTESEVDACGAPAGWPGPKMMNF*CDRWPE
Trigger: TTCAGGCCACCGATCACACAAGAAATTCATCATTTT...GGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGATAAGGGACCGTAGTTaGGAAGATTTCTTTGAACGT +
Preference number: 5 (lower is better)
Translates to: PLNPKWMRVALPQGGLAPIRDRS*EDFFER
Trigger: ACGTTCAAAGAAATCTTCCAAACTACGGTCCCTTAT...CGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAGGCCAATCTGTGCGTaGGCAGGCTGGTGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRRPICA*AGWCRS
Trigger: GCTCCGACACCAGCCTGCCAACGCACAGATTGGCCT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTACACCTTGAAGTGTaGCACTATCAGGTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAVHLEV*HYQVQN
Trigger: ATTCTGCACCTGATAGTGCAACACTTCAAGGTGTAC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGACAGCCCGGAGGATTTaGGCATCTGGTGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPTARRI*ASGDFS
Trigger: CGAAAAATCACCAGATGCCAAAATCCTCCGGGCTGT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTCCCGGGGCTCCTGCTaGACATGTGTGACCATGGCG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSRGSC*TCVTMA
Trigger: CGCCATGGTCACACATGTCAAGCAGGAGCCCCGGGA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCTTTTCTGAAAGTTCTTaGGTTTTGGGCGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAFSESS*VLGVLV
Trigger: GACCAGCACGCCCAAAACCAAAGAACTTTCAGAAAA...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAGAGTGTCCAGAAACTaGTCGTGCCTGTTGGTTAGC +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPRVSRN*SCLLVS
Trigger: GCTAACCAACAGGCACGACAAGTTTCTGGACACTCT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGAGGTAGCATTTAACTaGCTGTCGAATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVEVAFN*LSNLLE
Trigger: TTCCAGAAGATTCGACAGCAAGTTAAATGCTACCTC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCTGAAAGACAGGGTCTaGTGCAGTGGCCTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRLKDRV*CSGLRP
Trigger: CGGGCGCAGGCCACTGCACAAGACCCTGTCTTTCAG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGATTGTCCAGGCTGTTaGCCGCGGCCACCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKDCPGC*PRPPGC
Trigger: ACACCCTGGTGGCCGCGGCAAACAGCCTGGACAATC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp GGCAGTGGGCACCCCAGGCAGAGCTGCTTCCACGGCTCCAAGTTCTaGCTGAGGCTTACACTTCTTAAAAATGGCAGAGAGCTGGTACCG +
Preference number: 5 (lower is better)
Translates to: GSGHPRQSCFHGSKF*LRLTLLKNGRELVP
Trigger: CGGTACCAGCTCTCTGCCATTTTTAAGAAGTGTAAGCCTCAGTCAGAACTTGGAGCCGTGGAAGCAGCTCTGCCTGGGGTGCCCACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp TCCACACACAGCTCCAGCGTCCTGAGGCCTTGGCTGACCAATGTCTaGGACCCATTGAGTGCAGACACCAAGGGATCCATAAGCATGGGC +
Preference number: 5 (lower is better)
Translates to: STHSSSVLRPWLTNV*DPLSADTKGSISMG
Trigger: GCCCATGCTTATGGATCCCTTGGTGTCTGCACTCAATGGGTCTCAGACATTGGTCAGCCAAGGCCTCAGGACGCTGGAGCTGTGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp TTGGCTGCTCCACAGTCATCAGCAGCTTGTCGAACCACTGCAGCTTaGGTTCGGACTTGGGCCACATGTCTGGCCGCAACGCAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LAAPQSSAACRTTAA*VRTWATCLAATQSS
Trigger: TGAAGACTGCGTTGCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGTGGAGCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GCTCTCTCCTCGTCTTTTAAAGGCGTTGCGCACCGCATCAGAAGCTaGTCCAGCGTGGTCTTTGCCATAGCGACTGCCCCATTGGAAACC +
Preference number: 5 (lower is better)
Translates to: ALSSSFKGVAHRIRS*SSVVFAIATAPLET
Trigger: GGTTTCCAATGGGGCAGTCGCTATGGCAAAGACCACGCTGGAGCAGCTTCTGATGCGGTGCGCAACGCCTTTAAAAGACGAGGAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp CTCTTCCCAGTGACCTGGGCCAACACCTGCAGCGAATGCATGGCCTaGTTCCTCACAGTGGAGTTTGGAGAGGTGACTTCTCGAACCAAG +
Preference number: 5 (lower is better)
Translates to: LFPVTWANTCSECMA*FLTVEFGEVTSRTK
Trigger: CTTGGTTCGAGAAGTCACCTCTCCAAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGTCACTGGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp ACCGTGACACTCTTCCCAGTGACCTGGGCCAACACCTGCAGCGAATaGATGGCCTGCTTCCTCACAGTGGAGTTTGGAGAGGTGACTTCT +
Preference number: 5 (lower is better)
Translates to: TVTLFPVTWANTCSE*MACFLTVEFGEVTS
Trigger: AGAAGTCACCTCTCCAAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGTCACTGGGAAGAGTGTCACGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp TCCATGATCACCGTGACACTCTTCCCAGTGACCTGGGCCAACACCTaGAGCGAATGCATGGCCTGCTTCCTCACAGTGGAGTTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: SMITVTLFPVTWANT*SECMACFLTVEFGE
Trigger: CTCTCCAAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGTCACTGGGAAGAGTGTCACGGTGATCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp TACACCTTGAAGTGTTGCACTATCAGGTGCAGAATGTGGACCAGCTaGGGGACGGTGTGCCCCTCCTCCACAATGATCTTCCGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: YTLKCCTIRCRMWTS*GTVCPSSTMIFRVQ
Trigger: CTGGACCCGGAAGATCATTGTGGAGGAGGGGCACACCGTCCCGCAGCTGGTCCACATTCTGCACCTGATAGTGCAACACTTCAAGGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp ACTTGGTTTGGCTGCTCCACAGTCATCAGCAGCTTGTCGAACCACTaGAGCTTGAGTTCGGACTTGGGCCACATGTCTGGCCGCAACGCA +
Preference number: 5 (lower is better)
Translates to: TWFGCSTVISSLSNH*SLSSDLGHMSGRNA
Trigger: TGCGTTGCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGTGGAGCAGCCAAACCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TCTTTGTGGGGTTCCATGATCACCGTGACACTCTTCCCAGTGACCTaGGCCAACACCTGCAGCGAATGCATGGCCTGCTTCCTCACAGTG +
Preference number: 5 (lower is better)
Translates to: SLWGSMITVTLFPVT*ANTCSECMACFLTV
Trigger: CACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGTCACTGGGAAGAGTGTCACGGTGATCATGGAACCCCACAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TCCTTCCAGTTGGTGGCTGCCATGTTCTCCTTGCGGTGCCTCTCTTaGAAGTTCTCACTCACCCACACACGTCGCAACTGGCTCACCAGA +
Preference number: 5 (lower is better)
Translates to: SFQLVAAMFSLRCLS*KFSLTHTRRNWLTR
Trigger: TCTGGTGAGCCAGTTGCGACGTGTGTGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAAGGAGAACATGGCAGCCACCAACTGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp ATTCCACGCTGCAGAGGTTTGAAGCTACTGAGGATGGCTGGGGACTaGAGGACAGTTAGCAGGAAGCTCAGCACTTCTAGGCCCGTGCAG +
Preference number: 5 (lower is better)
Translates to: IPRCRGLKLLRMAGD*RTVSRKLSTSRPVQ
Trigger: CTGCACGGGCCTAGAAGTGCTGAGCTTCCTGCTAACTGTCCTCCAGTCCCCAGCCATCCTCAGTAGCTTCAAACCTCTGCAGCGTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CCCAGGTTGGTTGGCTGTAAGCCTGCGTTGATTTGTGCAGCTTCCTaGAGTTCGATGATTTGCTGGGCTGCCTGTAGGAGAGGCGTGTGC +
Preference number: 5 (lower is better)
Translates to: PRLVGCKPALICAAS*SSMICWAACRRGVC
Trigger: GCACACGCCTCTCCTACAGGCAGCCCAGCAAATCATCGAACTCCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCCAACCAACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATGGTGGCCTGAACTGTTaGTGTAGCTCAATAATTATT +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDGGLNC*CSSIII
Trigger: AATAATTATTGAGCTACACAAACAGTTCAGGCCACC...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTCATCGTCGATGTTCTaGGCGAAGAGCTGGACGGCG +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSSSMF*AKSWTA
Trigger: CGCCGTCCAGCTCTTCGCCAAGAACATCGACGATGA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGTTTGGAAGATTTCTTaGAACGTTAAGGGGTTCATC +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVVWKIS*NVKGFI
Trigger: GATGAACCCCTTAACGTTCAAAGAAATCTTCCAAAC...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTGAGGCTTCAGCATTaGTTCATTTTCAGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAVRLQH*FIFSCK
Trigger: TTTGCAGCTGAAAATGAACAAATGCTGAAGCCTCAC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCATGCTGTCAGCAGGGTaGCGTAAGGTGCGCCACAGA +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTMLSAG*RKVRHR
Trigger: TCTGTGGCGCACCTTACGCAACCCTGCTGACAGCAT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTCCTCTGGCCCCCTTaGTGGGTGATCACCACCACT +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLLWPP*WVITTT
Trigger: AGTGGTGGTGATCACCCACAAAGGGGGCCAGAGGAG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAATGAACCTGTTGGGGTaGGCAGCCAGCACATCCCGC +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKMNLLG*AASTSR
Trigger: GCGGGATGTGCTGGCTGCCAACCCCAACAGGTTCAT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAAGTGTCCGCTGTACTaGCAGGCTGGGTCCACGCAG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRKCPLY*QAGSTQ
Trigger: CTGCGTGGACCCAGCCTGCAAGTACAGCGGACACTT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCTTCTCCACTGGAATTaGGGTCCATATCTGAATCCG +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPLLHWN*GPYLNP
Trigger: CGGATTCAGATATGGACCCAAATTCCAGTGGAGAAG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGTGTCTGTGTGCTGCTaGTCAATGGGCTTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTVSVCC*SMGLAR
Trigger: CCTCGCCAAGCCCATTGACAAGCAGCACACAGACAC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAGGCAAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCAGAGTGTCCAGAAACTaGTCGTGCCTGTTGGTTAGC +
Preference number: 5 (lower is better)
Translates to: KARRVKGWRRFCGLRQRSRVSRN*SCLLVS
Trigger: GCTAACCAACAGGCACGACAAGTTTCTGGACACTCT...GGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAGGGTCGGATGGGGATaGGCGGCACGCACTGGGACA +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGRVGWG*AARTGT
Trigger: TGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAGGGTCGGATGGGGATaGGCGGCACGCACTGGGACA +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASRVGWG*AARTGT
Trigger: TGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATATAAAACTCCGTTGTTaGCTTCGGCTTAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDIKLRC*LRLNLK
Trigger: CTTCAGATTAAGCCGAAGCAAACAACGGAGTTTTAT...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGCTATTCGATGACGCGTCTATGTGCGCTGTGGGCAGGAAGAGCTGGAAGGTGGATGTCGTGCAGGCTGTaGTTCCTTCCCAGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: GYSMTRLCALWAGRAGRWMSCRL*FLPRLV
Trigger: AACCAACCTGGGAAGGAACAACAGCCTGCACGACAT...CCACCTTCCAGCTCTTCCTGCCCACAGCGCACATAGACGCGTCATCGAATAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCATACATTGACCAGTCCTaGTTTCCGGGCGATTTTTCC +
Preference number: 5 (lower is better)
Translates to: HAAEALCGRQQHRAVVLAYIDQS*FPGDFS
Trigger: GGAAAAATCGCCCGGAAACAAGGACTGGTCAATGTA...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCCACATGGGTGCTGTaGCTCTTATGGGCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTATWVL*LLWALD
Trigger: ATCCAGGGCCCATAAGAGCAACAGCACCCATGTGGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGAAAGTGAAGAGGGGTaGTCCTCCACGAGGCGCATC +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTESEEG*SSTRRI
Trigger: GATGCGCCTCGTGGAGGACAACCCCTCTTCACTTTC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGCAGCGCCCACTCCTaGAGCATGCTGCGCGGCACC +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGCSAHS*SMLRGT
Trigger: GGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGCA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGCAGCGCCCACTCCTaGAGCATGCTGCGCGGCACC +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSCSAHS*SMLRGT
Trigger: GGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGCA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAGAAACTCAGAAATGTaGGGCGTGAGTCGAAATGGG +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPRNSEM*GVSRNG
Trigger: CCCATTTCGACTCACGCCCAACATTTCTGAGTTTCT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGATTGTCCAGGCTGTTaGCCGCGGCCACCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCDCPGC*PRPPGC
Trigger: ACACCCTGGTGGCCGCGGCAAACAGCCTGGACAATC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTCCATGCGGCACAGATaGTCCAGGCTGTTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSMRHR*SRLFAA
Trigger: CGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACACTCTCCAGTGCTATCTCCTGCCTaGGCCATTCCAAGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: VLHAEPPGMLRVHSAHSPVLSPA*AIPRLV
Trigger: AACCAACCTTGGAATGGCCAAGGCAGGAGATAGCAC...TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp CCAGGGGGAAGGTGTGGGCGAACCTGGCAGCAGGCCGGGCCTCTTCCTCACCAGGTGGGTTTATGCATTTaGGAAGTAATTCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: PGGRCGRTWQQAGPLPHQVGLCI*EVIHLS
Trigger: AGAAAGGTGAATTACTTCCAAAATGCATAAACCCAC...CTGGTGAGGAAGAGGCCCGGCCTGCTGCCAGGTTCGCCCACACCTTCCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACCGCGGTCCTTGGGGTaGGAGACCCGTTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGPRSLG*ETRLEE
Trigger: CTCCTCCAAACGGGTCTCCAACCCCAAGGACCGCGG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS TCA 90 bp GTGGGCACCCCAGGCAGAGCTGCTTCCACGGCTCCAAGTTCTGACTaGGGCTTACACTTCTTAAAAATGGCAGAGAGCTGGTACCGAGCA +
Preference number: 5 (lower is better)
Translates to: VGTPGRAASTAPSSD*GLHFLKMAESWYRA
Trigger: TGCTCGGTACCAGCTCTCTGCCATTTTTAAGAAGTGTAAGCCTCAGTCAGAACTTGGAGCCGTGGAAGCAGCTCTGCCTGGGGTGCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp AATGCAGGACGAATTCCGCGAAGCCTATCAGAGCCAGCTGGATGGTaGACATCTTCCGGAACGTCCAGTAGTCCGTGGCATTGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: NAGRIPRSLSEPAGW*TSSGTSSSPWHWGR
Trigger: CCTTCCCCAATGCCACGGACTACTGGACGTTCCGGAAGATGTTCACCATCCAGCTGGCTCTGATAGGCTTCGCGGAATTCGTCCTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp TGGACCCACGTCTTCTCTGCCAGCGTCGTGGAAATGTGGCACAGCTaGACGAAAGCGCTGAGCAGCGCTCCAGTCTATGAACAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: WTHVFSASVVEMWHS*TKALSSAPVYEQKD
Trigger: GTCTTTCTGTTCATAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTCCACGACGCTGGCAGAGAAGACGTGGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480695.1
CDS GCA 90 bp CAGCGTCCTGAGGCCTTGGCTGACCAATGTCTGAGACCCATTGAGTaGAGACACCAAGGGATCCATAAGCATGGGCAGGTACGGCAAAAG +
Preference number: 5 (lower is better)
Translates to: QRPEALADQCLRPIE*RHQGIHKHGQVRQK
Trigger: CTTTTGCCGTACCTGCCCATGCTTATGGATCCCTTGGTGTCTGCACTCAATGGGTCTCAGACATTGGTCAGCCAAGGCCTCAGGACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp ACCTGCAGGACGATCTTCTTGTGTATGGCGAATTTGGCGATAATGTaGGCCAGGAGCAAGTGTCCGCTGTACTTGCAGGCTGGGTCCACG +
Preference number: 5 (lower is better)
Translates to: TCRTIFLCMANLAIM*ARSKCPLYLQAGST
Trigger: CGTGGACCCAGCCTGCAAGTACAGCGGACACTTGCTCCTGGCGCACATTATCGCCAAATTCGCCATACACAAGAAGATCGTCCTGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp ACCCGTGCTGCTCGTAAGCAATCGCAGTCGCTGTCTCCGAGTACTTaGACCGCTTCTGCCACAGACCAGCCCACATATCTTCCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: TRAARKQSQSLSPST*TASATDQPTYLPLV
Trigger: TACAAGAGGAAGATATGTGGGCTGGTCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAGCGACTGCGATTGCTTACGAGCAGCACGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS GCA 90 bp CCACATGGCCCAGGCTTTCACCAGCACATCGTGCATCTGCACAGCTaGAGAGAAGGCTTTGTTTGCCTCCTCGGACTTGTTGATCTGAGC +
Preference number: 5 (lower is better)
Translates to: PHGPGFHQHIVHLHS*REGFVCLLGLVDLS
Trigger: GCTCAGATCAACAAGTCCGAGGAGGCAAACAAAGCCTTCTCTGCAGCTGTGCAGATGCACGATGTGCTGGTGAAAGCCTGGGCCATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp ACCCTGTCTCTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTaGATGGTCTGGACCCTCCTCACTCTGGAGCCGGCAGCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: TLSLEMVFGEKGHIV*MVWTLLTLEPAASR
Trigger: CCGGGAGGCTGCCGGCTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGAGACAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS GCA 90 bp GCTCTCATGAGACACGTGGCCCTTAGGTTGAGAAGTAGAGATACGTaGTATCCCCCTAGTGCCTGCACGGTGGGGAACTGGATACCTTGG +
Preference number: 5 (lower is better)
Translates to: ALMRHVALRLRSRDT*YPPSACTVGNWIPW
Trigger: CCAAGGTATCCAGTTCCCCACCGTGCAGGCACTAGGGGGATAGCACGTATCTCTACTTCTCAACCTAAGGGCCACGTGTCTCATGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CCA 90 bp CCATTCCTTTCGAGCCATTTTCTTCACTGTGAAACATGGCTGTGCTaGGCTGGCTGCCCACCTGGTAGCAAGGCAGCAAGAAAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: PFLSSHFLHCETWLC*AGCPPGSKAARKGH
Trigger: GTGGCCCTTTCTTGCTGCCTTGCTACCAGGTGGGCAGCCAGCCCAGCACAGCCATGTTTCACAGTGAAGAAAATGGCTCGAAAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp ACTGCACTGATGGCTCCGGTGGCCGTCCTAAAGCGTTTCACTTCCTaGGCAGAATCCACGGACAGGCCTCTCTTAATGGAGGATGAGACA +
Preference number: 5 (lower is better)
Translates to: TALMAPVAVLKRFTS*AESTDRPLLMEDET
Trigger: TGTCTCATCCTCCATTAAGAGAGGCCTGTCCGTGGATTCTGCCCAGGAAGTGAAACGCTTTAGGACGGCCACCGGAGCCATCAGTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CACTCGGAAATGCTTTCGTTTCCGTCGCTCCTCTGGCCCCCTTTGTaGGTGATCACCACCACTTCCATCCACTTGCGCAGATGTTGCATC +
Preference number: 5 (lower is better)
Translates to: HSEMLSFPSLLWPPL*VITTTSIHLRRCCI
Trigger: GATGCAACATCTGCGCAAGTGGATGGAAGTGGTGGTGATCACCCACAAAGGGGGCCAGAGGAGCGACGGAAACGAAAGCATTTCCGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359863.8
ENST00000456197.2
CDS CCA 90 bp TGTCTCTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTGCATaGTCTGGACCCTCCTCACTCTGGAGCCGGCAGCCTCCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: CLLKWCLEKKGILSA*SGPSSLWSRQPPGS
Trigger: GGACCCGGGAGGCTGCCGGCTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGCAGACAAAACATTTTTaGTGTGAGGACGAAGATGTT +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVQTKHF*CEDEDV
Trigger: AACATCTTCGTCCTCACACAAAAAATGTTTTGTCTG...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCTCTCCTGCTCGCTCTaGGAACGGATGCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLSCSL*ERMQST
Trigger: GGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTTTGGAAGATTTCTTaGAACGTTAAGGGGTTCATC +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAVWKIS*NVKGFI
Trigger: GATGAACCCCTTAACGTTCAAAGAAATCTTCCAAAC...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCATAAGGGACCGTAGTTaGGAAGATTTCTTTGAACGT +
Preference number: 5 (lower is better)
Translates to: VVKAAGSEPGAPFTFRVAIRDRS*EDFFER
Trigger: ACGTTCAAAGAAATCTTCCAAACTACGGTCCCTTAT...GGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTGGAGAGCTCCACGTaGGAGCCCATTTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLESST*EPISGR
Trigger: CCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCAGCGTCCTGAGGCCTaGGCTGACCAATGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRQRPEA*ADQCLR
Trigger: TCTCAGACATTGGTCAGCCAAGGCCTCAGGACGCTG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTATGAACCTGTTGGGGTaGGCAGCCAGCACATCCCGC +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCMNLLG*AASTSR
Trigger: GCGGGATGTGCTGGCTGCCAACCCCAACAGGTTCAT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAGGGTGATGAACCTGTaGGGGTTGGCAGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRRVMNL*GLAAST
Trigger: TGTGCTGGCTGCCAACCCCAACAGGTTCATCACCCT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAAAGAGCTGGGAGGGATaGGCATTGGTGGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKKSWEG*ALVAFS
Trigger: CGAGAAGGCCACCAATGCCAATCCCTCCCAGCTCTT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCGGGAGCATGGCTCCTaGGCAGCTGGTGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGREHGS*AAGANG
Trigger: CCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCCG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTCTACATCCTCCTCTTaGGACTCGCTGTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSTSSS*DSLFSR
Trigger: GCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAGA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCTTTTCATAGGATTCTaGTGCCTGCTCAAAGAACCC +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPLFIGF*CLLKEP
Trigger: GGGTTCTTTGAGCAGGCACAAGAATCCTATGAAAAG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTTCGCCAGGCCCTGTaGGAGCTGCCTGAGAACCTC +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCFRQAL*ELPENL
Trigger: GAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAACATGGTCGAGACGTaGGACACATTCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTNMVET*DTFSRP
Trigger: GGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACTGAAAGACAGGGTCTaGTGCAGTGGCCTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGLKDRV*CSGLRP
Trigger: CGGGCGCAGGCCACTGCACAAGACCCTGTCTTTCAG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGGATTTGGCCTCCAAGATTTaGATCCACTTTTTCAACTTA +
Preference number: 5 (lower is better)
Translates to: ESEVDACGAPAGWPGPVDLASKI*IHFFNL
Trigger: TAAGTTGAAAAAGTGGATCAAAATCTTGGAGGCCAA...ATCCACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTGAATCCGAAGTGGATGCGTGTGGCGCTCCCGCAGGGTGGCCTGGCCCCGTGTTGGCCTCCAAGATTTaGATCCACTTTTTCAACTTA +
Preference number: 5 (lower is better)
Translates to: TESEVDACGAPAGWPGPVLASKI*IHFFNL
Trigger: TAAGTTGAAAAAGTGGATCAAAATCTTGGAGGCCAA...CACGGGGCCAGGCCACCCTGCGGGAGCGCCACACGCATCCACTTCGGATTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGAAAAACAAGTGCCTCTaGGTGGTCTCCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPKNKCL*VVSFLF
Trigger: GAAGAGAAAGGAGACCACCAAGAGGCACTTGTTTTT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGACCTGGTGGCTGGCTaGGGTTCCCCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSDLVAG*GSPRLH
Trigger: GTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGTC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGACCTGGTGGCTGGCTaGGGTTCCCCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWDLVAG*GSPRLH
Trigger: GTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGTC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATGCAGCGCCCACTCCTaGAGCATGCTGCGCGGCACC +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKCSAHS*SMLRGT
Trigger: GGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGCA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTCCATGCGGCACAGATaGTCCAGGCTGTTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSMRHR*SRLFAA
Trigger: CGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAACACATGAAGATAGCTGAGGGCTCCGAGAGTCTGGCATGCCGACCCGCTGCTGCAATCACTCCTCATTaGCAAAGCACGGCTCCCATC +
Preference number: 5 (lower is better)
Translates to: KHMKIAEGSESLACRPAAAITPH*QSTAPI
Trigger: GATGGGAGCCGTGCTTTGCAAATGAGGAGTGATTGC...AGCAGCGGGTCGGCATGCCAGACTCTCGGAGCCCTCAGCTATCTTCATGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp CGTGGAGCTCATGAGAGCTCCTGGATCTTCACCGGGGAGGTGCTATCTCCTGCCTGCACCCAGCAGGGGTaGAACTTTTTAAGCCAATTG +
Preference number: 5 (lower is better)
Translates to: RGAHESSWIFTGEVLSPACTQQG*NFLSQL
Trigger: CAATTGGCTTAAAAAGTTCAACCCCTGCTGGGTGCA...GGCAGGAGATAGCACCTCCCCGGTGAAGATCCAGGAGCTCTCATGAGCTCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS GCA 90 bp GATGGTCTTTTCTGTAAAGTTGGGGTGTGCCAGGAGCTGGTAGAGTaGGTGCTTGTTGTCCTCCAGGCTCATCATGGCCACCAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: DGLFCKVGVCQELVE*VLVVLQAHHGHQEA
Trigger: TGCTTCCTGGTGGCCATGATGAGCCTGGAGGACAACAAGCACGCACTCTACCAGCTCCTGGCACACCCCAACTTTACAGAAAAGACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GATCCATTCCTTTCGAGCCATTTTCTTCACTGTGAAACATGGCTGTaGTGGGCTGGCTGCCCACCTGGTAGCAAGGCAGCAAGAAAGGGC +
Preference number: 5 (lower is better)
Translates to: DPFLSSHFLHCETWL*WAGCPPGSKAARKG
Trigger: GCCCTTTCTTGCTGCCTTGCTACCAGGTGGGCAGCCAGCCCAGCACAGCCATGTTTCACAGTGAAGAAAATGGCTCGAAAGGAATGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp TGGGGATCGTTCAGTGTGGCTTCCATCATGAACAGCTCCACTGTCTaGGAGGGATGTCGAGTCAGGAACTTGATCAGGGGCTCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: WGSFSVASIMNSSTV*EGCRVRNLIRGSRN
Trigger: ATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGACATCCCTCGCAGACAGTGGAGCTGTTCATGATGGAAGCCACACTGAACGATCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp AACACCTTGGTGTTTCCACATGTCATGCAGGCGGCAATTCCACGCTaGAGAGGTTTGAAGCTACTGAGGATGGCTGGGGACTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: NTLVFPHVMQAAIPR*RGLKLLRMAGDWRT
Trigger: TGTCCTCCAGTCCCCAGCCATCCTCAGTAGCTTCAAACCTCTGCAGCGTGGAATTGCCGCCTGCATGACATGTGGAAACACCAAGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GCAGCTGTGGGATCCAGGCCAGCCACTGGATGGGTGGCACACCAATaGAGTACTTGTCGACGGCATCTGCCAAAGTGTTTTTGTCATCAT +
Preference number: 5 (lower is better)
Translates to: AAVGSRPATGWVAHQ*STCRRHLPKCFCHH
Trigger: ATGATGACAAAAACACTTTGGCAGATGCCGTCGACAAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTGGCCTGGATCCCACAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GAGTTTGGAGAGGTGACTTCTCGAACCAAGTCGTGTGTCACATGGTaGAAAGACTTTTCCTGGGCGGCCACGATCTCTTCGGCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: EFGEVTSRTKSCVTW*KDFSWAATISSALS
Trigger: GGAGAGAGCCGAAGAGATCGTGGCCGCCCAGGAAAAGTCTTTCCACCATGTGACACACGACTTGGTTCGAGAAGTCACCTCTCCAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GTGGAGTTTGGAGAGGTGACTTCTCGAACCAAGTCGTGTGTCACATaGTGGAAAGACTTTTCCTGGGCGGCCACGATCTCTTCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: VEFGEVTSRTKSCVT*WKDFSWAATISSAL
Trigger: GAGAGCCGAAGAGATCGTGGCCGCCCAGGAAAAGTCTTTCCACCATGTGACACACGACTTGGTTCGAGAAGTCACCTCTCCAAACTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GGTCATAGTAACGGGAGATGGGGTTGTCATGCTCGATGCCCTTCTTaGCGCAGCGCTGCTTGTAGATCTCCACAAGGGAAAGTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GHSNGRWGCHARCPS*RSAACRSPQGKVKR
Trigger: CCTCTTCACTTTCCCTTGTGGAGATCTACAAGCAGCGCTGCGCCAAGAAGGGCATCGAGCATGACAACCCCATCTCCCGTTACTATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CCCGATGGTGGTCAGAAACTCAGAAATGTTGGGCGTGAGTCGAAATaGGACAGGACGGTTGGCATCCAGGTCTCCAGTCGCGTCGTTTAT +
Preference number: 5 (lower is better)
Translates to: PDGGQKLRNVGRESK*DRTVGIQVSSRVVY
Trigger: ATAAACGACGCGACTGGAGACCTGGATGCCAACCGTCCTGTCCCATTTCGACTCACGCCCAACATTTCTGAGTTTCTGACCACCATCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GGTGCTGTTGCTCTTATGGGCCCTGGATCTGATGCAGAATGGGACTaGTTACCCACTGAACTTGGCTGCTGCTGTCCAGAATCGCTCTTG +
Preference number: 5 (lower is better)
Translates to: GAVALMGPGSDAEWD*LPTELGCCCPESLL
Trigger: CAAGAGCGATTCTGGACAGCAGCAGCCAAGTTCAGTGGGTAACCAGTCCCATTCTGCATCAGATCCAGGGCCCATAAGAGCAACAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGTGGTGAGGATGTGTTaGGCAGCAATCAGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTVVRMC*AAIRSS
Trigger: GGAGCTTCTGATTGCTGCCAAACACATCCTCACCAC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCTCTCCTGCTCGCTCTaGGAACGGATGCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASLSCSL*ERMQST
Trigger: GGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTCACAGTCTGGCAGTaGGCCACACGGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLTVWQ*ATRMYV
Trigger: GACATACATCCGTGTGGCCAACTGCCAGACTGTGAG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTCCTGCAGGACCTCTTaGTGGGGTTCCATGATCACC +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSCRTS*WGSMIT
Trigger: GGTGATCATGGAACCCCACAAAGAGGTCCTGCAGGA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAGGCCAATCTGTGCGTaGGCAGGCTGGTGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRPICA*AGWCRS
Trigger: GCTCCGACACCAGCCTGCCAACGCACAGATTGGCCT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGCATATGTGTGTGGATTaGATCGACTTCTATGGTAGC +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPHMCVD*IDFYGS
Trigger: GCTACCATAGAAGTCGATCAAATCCACACACATATG...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAATGAACCTGTTGGGGTaGGCAGCCAGCACATCCCGC +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKMNLLG*AASTSR
Trigger: GCGGGATGTGCTGGCTGCCAACCCCAACAGGTTCAT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTCGGGGTCCAGGACCTaGGTAATAAACACACTGGTG +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSGSRT*VINTLV
Trigger: CACCAGTGTGTTTATTACCAAGGTCCTGGACCCCGA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACGGCGCAGCTTGCTGTaGCGGTTCTTGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKRRSLL*RFLLLS
Trigger: TGACAACAACAAGAACCGCAACAGCAAGCTGCGCCG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAAGTGTCCGCTGTACTaGCAGGCTGGGTCCACGCAG +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGKCPLY*QAGSTQ
Trigger: CTGCGTGGACCCAGCCTGCAAGTACAGCGGACACTT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTCTGCAGCTCCCACTaGATGACGACTTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLCSSH*MTTSDR
Trigger: CCTGTCTGAAGTCGTCATCAAGTGGGAGCTGCAGAG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTTGCTGCAGGCAGACTaGAGGATCATAAGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRLLQAD*RIIRVP
Trigger: CGGGACCCTTATGATCCTCAAGTCTGCCTGCAGCAA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGATTGGGGAGTTATTCTaGACCCATTCTTCCACGATT +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPIGELF*THSSTI
Trigger: AATCGTGGAAGAATGGGTCAAGAATAACTCCCCAAT...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCGGGAGCATGGCTCCTaGGCAGCTGGTGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGREHGS*AAGANG
Trigger: CCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCCG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCGGGAGCATGGCTCCTaGGCAGCTGGTGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGREHGS*AAGANG
Trigger: CCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCCG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCCAGGTTGATGACGTaGGTGATGGACGGGAGCATG +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCARLMT*VMDGSM
Trigger: CATGCTCCCGTCCATCACCAACGTCATCAACCTGGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTCCCGGGGCTCCTGCTaGACATGTGTGACCATGGCG +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSSRGSC*TCVTMA
Trigger: CGCCATGGTCACACATGTCAAGCAGGAGCCCCGGGA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATCTACATCCTCCTCTTaGGACTCGCTGTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSTSSS*DSLFSR
Trigger: GCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAGA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAGGAGAGTCAAGGGCTGGAGAAGGTTCTGTGGCCTGCGGCAGAGGTCCAGAGAATATCCAGAGCTACATaGACCAGTCCTTGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: KESQGLEKVLWPAAEVQRISRAT*TSPCFR
Trigger: CCGGAAACAAGGACTGGTCAATGTAGCTCTGGATAT...TCTCTGGACCTCTGCCGCAGGCCACAGAACCTTCTCCAGCCCTTGACTCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACGCCGGGCTGCGGTGTaGTGCTTCTGCACAATCTCT +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKRRAAV*CFCTIS
Trigger: AGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTGCAGCGCCCACTCCTaGAGCATGCTGCGCGGCACC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWCSAHS*SMLRGT
Trigger: GGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGCA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTAATGGGACAGGACGGTaGGCATCCAGGTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCNGTGR*ASRSPV
Trigger: GACTGGAGACCTGGATGCCAACCGTCCTGTCCCATT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTACCAGGGTGTTCACCTaGCTTTCCCCGCCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCTRVFT*LSPPSN
Trigger: GTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGGT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCACTGGATAAAATAGACTaGAACGACTGGAAGTCGAAC +
Preference number: 5 (lower is better)
Translates to: HAAEALCGRQQHRAVVLALDKID*NDWKSN
Trigger: GTTCGACTTCCAGTCGTTCAAGTCTATTTTATCCAG...TGCCAGAACCACCGCACGATGTTGCTGTCGGCCACACAGTGCTTCAGCCGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS TCA 90 bp CACGGGCTGGGGGTGCCTCGCACAACCACGCTCAGAAGACACCCATaGTCTGTCTCATACATTACCGATGCTCCTCCACTTTCAAAGTTT +
Preference number: 5 (lower is better)
Translates to: HGLGVPRTTTLRRHP*SVSYITDAPPLSKF
Trigger: AAACTTTGAAAGTGGAGGAGCATCGGTAATGTATGAGACAGATCATGGGTGTCTTCTGAGCGTGGTTGTGCGAGGCACCCCCAGCCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480695.1
CDS GCA 90 bp ACCTTATGCTCCACCACGTTAAGGTCCATTGTGAAGAGCCTGGGCTaGAACGTGGTACAGAACGTGTTCCCCTCCATCAGGCCAATCTGT +
Preference number: 5 (lower is better)
Translates to: TLCSTTLRSIVKSLG*NVVQNVFPSIRPIC
Trigger: ACAGATTGGCCTGATGGAGGGGAACACGTTCTGTACCACGTTGCAGCCCAGGCTCTTCACAATGGACCTTAACGTGGTGGAGCATAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GGTCAGAATGGCCATCGCCTGTCTGACGATCGCTCGAGCTTCCATTaGGTGAGCCTTGAGGAGACTATGAAAAACCTGCAGGACGATCTT +
Preference number: 5 (lower is better)
Translates to: GQNGHRLSDDRSSFH*VSLEETMKNLQDDL
Trigger: AAGATCGTCCTGCAGGTTTTTCATAGTCTCCTCAAGGCTCACGCAATGGAAGCTCGAGCGATCGTCAGACAGGCGATGGCCATTCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GGGACTGGAGGACAGTTAGCAGGAAGCTCAGCACTTCTAGGCCCGTaGAGATATTCCCATAGTTCACTTGGTTTGGCTGCTCCACAGTCA +
Preference number: 5 (lower is better)
Translates to: GTGGQLAGSSALLGP*RYSHSSLGLAAPQS
Trigger: TGACTGTGGAGCAGCCAAACCAAGTGAACTATGGGAATATCTGCACGGGCCTAGAAGTGCTGAGCTTCCTGCTAACTGTCCTCCAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp CTTCTCGTAGTTGGTGAGCCCTTCATAGATGACCTTTCCGACGGCTaGGTAGAGGCACTCCAGCTCTTCATATTTGGAGGCCACACTGGA +
Preference number: 5 (lower is better)
Translates to: LLVVGEPFIDDLSDG*VEALQLFIFGGHTG
Trigger: TCCAGTGTGGCCTCCAAATATGAAGAGCTGGAGTGCCTCTACGCAGCCGTCGGAAAGGTCATCTATGAAGGGCTCACCAACTACGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CAACACCTGCAGCGAATGCATGGCCTGCTTCCTCACAGTGGAGTTTaGAGAGGTGACTTCTCGAACCAAGTCGTGTGTCACATGGTGGAA +
Preference number: 5 (lower is better)
Translates to: QHLQRMHGLLPHSGV*RGDFSNQVVCHMVE
Trigger: TTCCACCATGTGACACACGACTTGGTTCGAGAAGTCACCTCTCCAAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GAGCAAATCTTCATTTCGTTTCCGTCGCTCCTCTGGCCCCCTTTGTaGGTGATCACCACCACTTCCATCCACTTGCGCAGATGTTGCATC +
Preference number: 5 (lower is better)
Translates to: EQIFISFPSLLWPPL*VITTTSIHLRRCCI
Trigger: GATGCAACATCTGCGCAAGTGGATGGAAGTGGTGGTGATCACCCACAAAGGGGGCCAGAGGAGCGACGGAAACGAAATGAAGATTTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000446306.7
ENST00000628380.2
CDS CCA 90 bp ATGGAGTTGTCAAAAACCTCGAAAAACTTTGCCCTGATGAGTGGCTaGGCACAGCGCAGCCCAGAGAGAAAGGCAGGCTCAAGTTTCGCC +
Preference number: 5 (lower is better)
Translates to: MELSKTSKNFALMSG*AQRSPERKAGSSFA
Trigger: GGCGAAACTTGAGCCTGCCTTTCTCTCTGGGCTGCGCTGTGCCCAGCCACTCATCAGGGCAAAGTTTTTCGAGGTTTTTGACAACTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GGGAGAAGTCGTAAAAGCTGCGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGTTCTTTTGGGCTGGTTaGCTTCTCAAGAGAAAAGTA +
Preference number: 5 (lower is better)
Translates to: GRSRKSCGLRARSALHIPFFWAG*LLKRKV
Trigger: TACTTTTCTCTTGAGAAGCAAACCAGCCCAAAAGAA...CGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCGCAGCTTTTACGACTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGCTTCACCAGGTGCTTaGCATGATGTTATGCCCCAC +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKASPGA*HDVMPH
Trigger: GTGGGGCATAACATCATGCAAAGCACCTGGTGAAGC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCTCACAGTCTGGCAGTaGGCCACACGGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLTVWQ*ATRMYV
Trigger: GACATACATCCGTGTGGCCAACTGCCAGACTGTGAG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGAGCCAAAGACCAGCTaGAACAGCTTGAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGREPKTS*NSLRYR
Trigger: CCTGTACCTCAAGCTGTTCAAGCTGGTCTTTGGCTC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCAGCGTCCTGAGGCCTaGGCTGACCAATGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASQRPEA*ADQCLR
Trigger: TCTCAGACATTGGTCAGCCAAGGCCTCAGGACGCTG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAAGTCGGGCTGCAGGTaGTCCACACACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGKSGCR*STHSSS
Trigger: GCTGGAGCTGTGTGTGGACAACCTGCAGCCCGACTT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAATGCTGTCAGCAGGGTaGCGTAAGGTGCGCCACAGA +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGMLSAG*RKVRHR
Trigger: TCTGTGGCGCACCTTACGCAACCCTGCTGACAGCAT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGTCTTTTCTGTAAAGTaGGGGTGTGCCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRVFSVK*GCARSW
Trigger: CCAGCTCCTGGCACACCCCAACTTTACAGAAAAGAC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGCCACCTCCCCGATTTaGCAAAGCTCCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTATSPI*QSSFSS
Trigger: TGAAGAAAAGGAGCTTTGCAAAATCGGGGAGGTGGC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCACCACTTCCATCCACTaGCGCAGATGTTGCATCATC +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTTTSIH*RRCCII
Trigger: GATGATGCAACATCTGCGCAAGTGGATGGAAGTGGT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAGGGTGATGAACCTGTaGGGGTTGGCAGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGRVMNL*GLAAST
Trigger: TGTGCTGGCTGCCAACCCCAACAGGTTCATCACCCT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTATCTCCTTCTGGATaGGGAGGTCCCAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLSPSG*GGPKSC
Trigger: GCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTCGGGGTCCAGGACCTaGGTAATAAACACACTGGTG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSGSRT*VINTLV
Trigger: CACCAGTGTGTTTATTACCAAGGTCCTGGACCCCGA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTCCGGCTGCTGGTCCTaGATCCTCTGCAGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSGCWS*ILCSSH
Trigger: GTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGGA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGTGTCTGTGTGCTGCTaGTCAATGGGCTTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASVSVCC*SMGLAR
Trigger: CCTCGCCAAGCCCATTGACAAGCAGCACACAGACAC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGTGTCTGTGTGCTGCTaGTCAATGGGCTTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGVSVCC*SMGLAR
Trigger: CCTCGCCAAGCCCATTGACAAGCAGCACACAGACAC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATCGAACCACTGCAGCTaGAGTTCGGACTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSNHCS*SSDLGH
Trigger: GTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAAAGAGCTGGGAGGGATaGGCATTGGTGGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKKSWEG*ALVAFS
Trigger: CGAGAAGGCCACCAATGCCAATCCCTCCCAGCTCTT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTTGCTGCAGGCAGACTaGAGGATCATAAGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLLQAD*RIIRVP
Trigger: CGGGACCCTTATGATCCTCAAGTCTGCCTGCAGCAA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGACCGGAACCAGAGGTaGTGTGTCTTCCCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGDRNQR*CVFPRY
Trigger: GTACCTGGGGAAGACACACAACCTCTGGTTCCGGTC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATTCATGGCAGTCCAGTaGGACACCCGCCAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKFMAVQ*DTRQAH
Trigger: GTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGAA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGGCTGTAAGCCTGCGTaGATTTGTGCAGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCGCKPA*ICAASW
Trigger: CCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAATGTCGTGCAGGCTGTaGTTCCTTCCCAGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKMSCRL*FLPRLV
Trigger: AACCAACCTGGGAAGGAACAACAGCCTGCACGACAT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGCCACATGGGTGCTGTaGCTCTTATGGGCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKATWVL*LLWALD
Trigger: ATCCAGGGCCCATAAGAGCAACAGCACCCATGTGGC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGCCACATGGGTGCTGTaGCTCTTATGGGCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASATWVL*LLWALD
Trigger: ATCCAGGGCCCATAAGAGCAACAGCACCCATGTGGC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTGAAAGACAGGGTCTaGTGCAGTGGCCTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLKDRV*CSGLRP
Trigger: CGGGCGCAGGCCACTGCACAAGACCCTGTCTTTCAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCGCCGGGCTGCGGTGTaGTGCTTCTGCACAATCTCT +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSRRAAV*CFCTIS
Trigger: AGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGAAAGTGAAGAGGGGTaGTCCTCCACGAGGCGCATC +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASESEEG*SSTRRI
Trigger: GATGCGCCTCGTGGAGGACAACCCCTCTTCACTTTC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGACCTGGTGGCTGGCTaGGGTTCCCCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFDLVAG*GSPRLH
Trigger: GTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGTC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGACCTGGTGGCTGGCTaGGGTTCCCCGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTDLVAG*GSPRLH
Trigger: GTGCAGGCGCGGGGAACCCAAGCCAGCCACCAGGTC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAATGGGACAGGACGGTaGGCATCCAGGTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASNGTGR*ASRSPV
Trigger: GACTGGAGACCTGGATGCCAACCGTCCTGTCCCATT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAACCAGGGTGTTCACCTaGCTTTCCCCGCCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKTRVFT*LSPPSN
Trigger: GTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGGT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCCATGCGGCACAGATaGTCCAGGCTGTTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSMRHR*SRLFAA
Trigger: CGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACATGGCGTGTGCTCCTaGGGGACTGCCCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIHGVCS*GTAPPT
Trigger: TGTGGGAGGGGCAGTCCCCAAGGAGCACACGCCATG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp CACCAGCTGCCAGATGAGCACGCAATCACTCCTCATTTGCAAAGCACGGCTCCCACCCTGTGGTGGGATTaGGGTAAACTCAGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: HQLPDEHAITPHLQSTAPTLWWD*GKLSCN
Trigger: ATTACAGCTGAGTTTACCCAAATCCCACCACAGGGT...GGGAGCCGTGCTTTGCAAATGAGGAGTGATTGCGTGCTCATCTGGCAGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS GCA 90 bp AAGTTCTCACTCACCCACACACGTCGCAACTGGCTCACCAGAGAGTaGTGGCTGGCCAGCCAGGAGTCATCGTTTTTCACTATAATGCTT +
Preference number: 5 (lower is better)
Translates to: KFSLTHTRRNWLTRE*WLASQESSFFTIML
Trigger: AAGCATTATAGTGAAAAACGATGACTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCAGTTGCGACGTGTGTGGGTGAGTGAGAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GTAGACACGACGTTTCATGGAGTTGTCAAAAACCTCGAAAAACTTTaGCCTGATGAGTGGCTGGGCACAGCGCAGCCCAGAGAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: VDTTFHGVVKNLEKL*PDEWLGTAQPREKG
Trigger: GCCTTTCTCTCTGGGCTGCGCTGTGCCCAGCCACTCATCAGGGCAAAGTTTTTCGAGGTTTTTGACAACTCCATGAAACGTCGTGTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GTCCTCAGACACGAACTGTCGCTTCAGCAGCCCCAAGCTGGTCATTaGCGCATCGAAGTGTCCAGAGAAGAAATCTTTGAGGTAGAGAGT +
Preference number: 5 (lower is better)
Translates to: VLRHELSLQQPQAGH*RIEVSREEIFEVES
Trigger: ACTCTCTACCTCAAAGATTTCTTCTCTGGACACTTCGATGCGGCAATGACCAGCTTGGGGCTGCTGAAGCGACAGTTCGTGTCTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS GCA 90 bp GCCCTTAGGTTGAGAAGTAGAGATACGTGCTATCCCCCTAGTGCCTaGACGGTGGGGAACTGGATACCTTGGAACTGGGAATTATCTTGG +
Preference number: 5 (lower is better)
Translates to: ALRLRSRDTCYPPSA*TVGNWIPWNWELSW
Trigger: CCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGCACTAGGGGGATAGCACGTATCTCTACTTCTCAACCTAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS GCA 90 bp CTTGCAGCCTACATAAAATTTACCGAGATGGCAGTATTAGGCGGCTaGACGAAGGAAGTTTCCGCACGCAGCGCTCTCATGAGACACGTG +
Preference number: 5 (lower is better)
Translates to: LAAYIKFTEMAVLGG*TKEVSARSALMRHV
Trigger: CACGTGTCTCATGAGAGCGCTGCGTGCGGAAACTTCCTTCGTGCAGCCGCCTAATACTGCCATCTCGGTAAATTTTATGTAGGCTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS GCA 90 bp ACCTTCTCTGCTGTGTGGATCTCAGTCTTTTCAAGAGAAGTCATTTaGCCTTCTCCAGTGCTCATCACCAAGCACTCCTGGGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: TFSAVWISVFSREVI*PSPVLITKHSWAGL
Trigger: CAGCCCTGCCCAGGAGTGCTTGGTGATGAGCACTGGAGAAGGGCAAATGACTTCTCTTGAAAAGACTGAGATCCACACAGCAGAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482799.3
CDS CCA 90 bp CAGCTTGAGGTACAGGTTGGAGAGCTCCACGTTGGAGCCCATTTCTaGCAGGCGATCAAGGAGATATTCCACCAGAATCGTAGCAAACAG +
Preference number: 5 (lower is better)
Translates to: QLEVQVGELHVGAHF*QAIKEIFHQNRSKQ
Trigger: CTGTTTGCTACGATTCTGGTGGAATATCTCCTTGATCGCCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCAACCTGTACCTCAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp ACTTCTCGAACCAAGTCGTGTGTCACATGGTGGAAAGACTTTTCCTaGGCGGCCACGATCTCTTCGGCTCTCTCCTCGTCTTTTAAAGGC +
Preference number: 5 (lower is better)
Translates to: TSRTKSCVTWWKDFS*AATISSALSSSFKG
Trigger: GCCTTTAAAAGACGAGGAGAGAGCCGAAGAGATCGTGGCCGCCCAGGAAAAGTCTTTCCACCATGTGACACACGACTTGGTTCGAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TTCTCACTCACCCACACACGTCGCAACTGGCTCACCAGAGAGTGCTaGCTGGCCAGCCAGGAGTCATCGTTTTTCACTATAATGCTTATG +
Preference number: 5 (lower is better)
Translates to: FSLTHTRRNWLTREC*LASQESSFFTIMLM
Trigger: CATAAGCATTATAGTGAAAAACGATGACTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCAGTTGCGACGTGTGTGGGTGAGTGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GCCTGCACGGTGGGGAACTGGATACCTTGGAACTGGGAATTATCTTaGATCCCATATTTAGTGTTCCAGGCCTGTCGTGTTCTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: ACTVGNWIPWNWELS*IPYLVFQACRVLRA
Trigger: GGCTCTGAGAACACGACAGGCCTGGAACACTAAATATGGGATCCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CCA 90 bp ACGTGCTATCCCCCTAGTGCCTGCACGGTGGGGAACTGGATACCTTaGAACTGGGAATTATCTTGGATCCCATATTTAGTGTTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: TCYPPSACTVGNWIP*NWELSWIPYLVFQA
Trigger: GGCCTGGAACACTAAATATGGGATCCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGCACTAGGGGGATAGCACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CCA 90 bp ACGGCTGATGGTGAAATTCCGTGGGGAAGAAGGTTTGGATTACGGTaGTGTGGCCAGGTGAGCTGCTTGTTCATTCACCTTCTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: TADGEIPWGRRFGLR*CGQVSCLFIHLLCC
Trigger: ACAGCAGAGAAGGTGAATGAACAAGCAGCTCACCTGGCCACACCACCGTAATCCAAACCTTCTTCCCCACGGAATTTCACCATCAGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482799.3
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATACGAGCTTCCGCAGTaGCTGTGCTGGTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKYELPQ*LCWFLL
Trigger: CAGGAGAAACCAGCACAGCAACTGCGGAAGCTCGTA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTCGACAGTCTGTGACTaGGAATGTCTGCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSTVCD*ECLLVF
Trigger: GAAGACAAGCAGACATTCCAAGTCACAGACTGTCGA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCAGCGTCCTGAGGCCTaGGCTGACCAATGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGQRPEA*ADQCLR
Trigger: TCTCAGACATTGGTCAGCCAAGGCCTCAGGACGCTG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCAGCGTCCTGAGGCCTaGGCTGACCAATGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSQRPEA*ADQCLR
Trigger: TCTCAGACATTGGTCAGCCAAGGCCTCAGGACGCTG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAAGTCGGGCTGCAGGTaGTCCACACACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKKSGCR*STHSSS
Trigger: GCTGGAGCTGTGTGTGGACAACCTGCAGCCCGACTT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAGCTGGAGAGAAGCTTaGCAGTCGGAAAACTCCACA +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSWREA*QSENST
Trigger: TGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGCT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAGGCCAATCTGTGCGTaGGCAGGCTGGTGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRPICA*AGWCRS
Trigger: GCTCCGACACCAGCCTGCCAACGCACAGATTGGCCT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAGGCCAATCTGTGCGTaGGCAGGCTGGTGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIRPICA*AGWCRS
Trigger: GCTCCGACACCAGCCTGCCAACGCACAGATTGGCCT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGTGGAATTCAGGGCTTaGAAGAGTGCAGCGATGATT +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTVEFRA*KSAAMI
Trigger: AATCATCGCTGCACTCTTCAAAGCCCTGAATTCCAC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTATGAACCTGTTGGGGTaGGCAGCCAGCACATCCCGC +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGMNLLG*AASTSR
Trigger: GCGGGATGTGCTGGCTGCCAACCCCAACAGGTTCAT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTCTGCAGCTCCCACTaGATGACGACTTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKLCSSH*MTTSDR
Trigger: CCTGTCTGAAGTCGTCATCAAGTGGGAGCTGCAGAG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATCCGGCTGCTGGTCCTaGATCCTCTGCAGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLSGCWS*ILCSSH
Trigger: GTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGGA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAGCTTGAGTTCGGACTaGGGCCACATGTCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGSLSSD*GHMSGR
Trigger: GCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCATAGTTCACTTGGTTaGGCTGCTCCACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTHSSLG*AAPQSS
Trigger: TGATGACTGTGGAGCAGCCAAACCAAGTGAACTATG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCAAGAGCTGGGAGGGATaGGCATTGGTGGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSKSWEG*ALVAFS
Trigger: CGAGAAGGCCACCAATGCCAATCCCTCCCAGCTCTT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGCATCACCAGCTCGCTaGTACCTGAGGTGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGASPAR*YLRWLR
Trigger: CCGAAGCCACCTCAGGTACAAGCGAGCTGGTGATGC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACGGGAGCATGGCTCCTaGGCAGCTGGTGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLREHGS*AAGANG
Trigger: CCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCCG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGCCAGGTTGATGACGTaGGTGATGGACGGGAGCATG +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSARLMT*VMDGSM
Trigger: CATGCTCCCGTCCATCACCAACGTCATCAACCTGGC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGACCGGAACCAGAGGTaGTGTGTCTTCCCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGDRNQR*CVFPRY
Trigger: GTACCTGGGGAAGACACACAACCTCTGGTTCCGGTC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGCTGTCTCCGAGTACTaGCACCGCTTCTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGAVSEY*HRFCHR
Trigger: TCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAGC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACACTGGTTCAATTCCTaGGAGCATCGAATCCAGTGG +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKHWFNS*EHRIQW
Trigger: CCACTGGATTCGATGCTCCAAGGAATTGAACCAGTG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCACTGGTTCAATTCCTaGGAGCATCGAATCCAGTGG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRHWFNS*EHRIQW
Trigger: CCACTGGATTCGATGCTCCAAGGAATTGAACCAGTG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATTCATGGCAGTCCAGTaGGACACCCGCCAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLFMAVQ*DTRQAH
Trigger: GTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGAA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTTCATGGCAGTCCAGTaGGACACCCGCCAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYFMAVQ*DTRQAH
Trigger: GTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGAA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTACATTGACCAGTCCTaGTTTCCGGGCGATTTTTCC +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTYIDQS*FPGDFS
Trigger: GGAAAAATCGCCCGGAAACAAGGACTGGTCAATGTA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGCATGCACTCGTTTTaGCCCATGACGCCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGCMHSF*PMTPAS
Trigger: GCTGGCAGGCGTCATGGGCAAAAACGAGTGCATGCA...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAACATGGTCGAGACGTaGGACACATTCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGNMVET*DTFSRP
Trigger: GGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCTGAAAGACAGGGTCTaGTGCAGTGGCCTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSLKDRV*CSGLRP
Trigger: CGGGCGCAGGCCACTGCACAAGACCCTGTCTTTCAG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CACATGTCCTTGAGTGTCCTGGAGAGACCCTGGGACGTGCCGTTATTCATGGTTGAAGAATTTGGGGAGTaGCTTGGTCTTGGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: HMSLSVLERPWDVPLFMVEEFGE*LGLGLQ
Trigger: TTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTC...AACCATGAATAACGGCACGTCCCAGGGTCTCTCCAGGACACTCAAGGACATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGTCTGTGCCGAGAAATaGCTCAAGAACCGGCACTTT +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRVCAEK*LKNRHF
Trigger: AAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGAC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATCGAACTGGGCGAGGTaGTGCAGGCGGGTCATGATG +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSNWAR*CRRVMM
Trigger: CATCATGACCCGCCTGCACAACCTCGCCCAGTTCGA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTCAAGGCCCTTTCATTaGACCCTGTGGTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSRPFH*TLWWDL
Trigger: CAAATCCCACCACAGGGTCAAATGAAAGGGCCTTGA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTGCCTGTCCTTGGCCTaGAGGTTGGTCCTAGGGCTG +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGCLSLA*RLVLGL
Trigger: CAGCCCTAGGACCAACCTCAAGGCCAAGGACAGGCA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTACACAGCTGCTGCTTaGCTTGGGAATCGACTTTTC +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTYTAAA*LGNRLF
Trigger: GAAAAGTCGATTCCCAAGCAAAGCAGCAGCTGTGTA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp GTGCTTCATGCTGAGCCTCCGGGCATGCTTCGTGTACACTCCGCACACTCTCCAAACTTTTTAAGCCAATaGCGGAAACATGCCCTATCG +
Preference number: 5 (lower is better)
Translates to: VLHAEPPGMLRVHSAHSPNFLSQ*RKHALS
Trigger: CGATAGGGCATGTTTCCGCAATTGGCTTAAAAAGTT...TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCTCAGCATGAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS GCA 90 bp AGCGCTCCAGTCTTCACCTCTCGGAGAGTGTCCAGAAACTTGTCGTaGCTGTTGGTTAGCATGTGCAGCTGGTTTCCAATGTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SAPVFTSRRVSRNLS*LLVSMCSWFPMSFS
Trigger: AGAAAAGGACATTGGAAACCAGCTGCACATGCTAACCAACAGGCACGACAAGTTTCTGGACACTCTCCGAGAGGTGAAGACTGGAGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp ATTTTGGCATCTGGTGATTTTTCGATGAGGGATGTCAGGATGGCCTaGATGAAGTTCTTCCGCATCTCCATGCTCATCACTGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: ILASGDFSMRDVRMA*MKFFRISMLITARR
Trigger: GCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGAACTTCATCCAGGCCATCCTGACATCCCTCATCGAAAAATCACCAGATGCCAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TATCCCCCTAGTGCCTGCACGGTGGGGAACTGGATACCTTGGAACTaGGAATTATCTTGGATCCCATATTTAGTGTTCCAGGCCTGTCGT +
Preference number: 5 (lower is better)
Translates to: YPPSACTVGNWIPWN*ELSWIPYLVFQACR
Trigger: ACGACAGGCCTGGAACACTAAATATGGGATCCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGCACTAGGGGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGTTCTCGGGGATCACTaGAGGGTTCTCAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKVLGDH*RVLKVA
Trigger: CGCTACTTTGAGAACCCTCAAGTGATCCCCGAGAAC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGGTTCTCGGGGATCACTaGAGGGTTCTCAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASVLGDH*RVLKVA
Trigger: CGCTACTTTGAGAACCCTCAAGTGATCCCCGAGAAC...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATCCTCACGCTCCGGGTaGACTTTCACAGCAATCGTT +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSSRSG*TFTAIV
Trigger: AACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGGA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACTCTCCTGCTCGCTCTaGGAACGGATGCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLSCSL*ERMQST
Trigger: GGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGCTTGTCCTTTTCTCCTaGCTTCTCGAAGGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASLVLFS*LLEGRH
Trigger: GTGCCTCCCTTCGAGAAGCAAGGAGAAAAGGACAAG...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCCACCTCCCCGATTTaGCAAAGCTCCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCATSPI*QSSFSS
Trigger: TGAAGAAAAGGAGCTTTGCAAAATCGGGGAGGTGGC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGTGGAATTCAGGGCTTaGAAGAGTGCAGCGATGATT +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRVEFRA*KSAAMI
Trigger: AATCATCGCTGCACTCTTCAAAGCCCTGAATTCCAC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTCTTGGAGCTCACTATaGGTGGAATTCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRSWSSL*VEFRAL
Trigger: CAAAGCCCTGAATTCCACCAATAGTGAGCTCCAAGA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATCTTGGAGCTCACTATaGGTGGAATTCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKSWSSL*VEFRAL
Trigger: CAAAGCCCTGAATTCCACCAATAGTGAGCTCCAAGA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGGCTTCTCCGGCCTCTaGGAGCTCACTATTGGTGGA +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKGFSGL*ELTIGG
Trigger: TCCACCAATAGTGAGCTCCAAGAGGCCGGAGAAGCC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCTCCTCTGGCCCCCTTaGTGGGTGATCACCACCACT +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYLLWPP*WVITTT
Trigger: AGTGGTGGTGATCACCCACAAAGGGGGCCAGAGGAG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCTCCTCTGGCCCCCTTaGTGGGTGATCACCACCACT +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPLLWPP*WVITTT
Trigger: AGTGGTGGTGATCACCCACAAAGGGGGCCAGAGGAG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATTATCTCCTTCTGGATaGGGAGGTCCCAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKLSPSG*GGPKSC
Trigger: GCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTATGAGGCGGCGCAGCTaGCTGTTGCGGTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGMRRRS*LLRFLL
Trigger: CAACAAGAACCGCAACAGCAAGCTGCGCCGCCTCAT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATCCGGCTGCTGGTCCTaGATCCTCTGCAGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSGCWS*ILCSSH
Trigger: GTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGGA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTCTCCACTGGAATTaGGGTCCATATCTGAATCCG +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLLHWN*GPYLNP
Trigger: CGGATTCAGATATGGACCCAAATTCCAGTGGAGAAG...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGCTTGTCAATGGGCTaGGCGAGGAGAGAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSCLSMG*ARRESA
Trigger: AGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGCA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAGCTTGAGTTCGGACTaGGGCCACATGTCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWSLSSD*GHMSGR
Trigger: GCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAAGCTCAATGCACTGCTaGATCCAGAAGTGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSSMHC*IQKWFP
Trigger: GGGGAACCACTTCTGGATCAAGCAGTGCATTGAGCT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAGCTCAATGCACTGCTaGATCCAGAAGTGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASSSMHC*IQKWFP
Trigger: GGGGAACCACTTCTGGATCAAGCAGTGCATTGAGCT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATCCCGGGGCTCCTGCTaGACATGTGTGACCATGGCG +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSSRGSC*TCVTMA
Trigger: CGCCATGGTCACACATGTCAAGCAGGAGCCCCGGGA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATTCATGGCAGTCCAGTaGGACACCCGCCAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQFMAVQ*DTRQAH
Trigger: GTGCGCCTGGCGGGTGTCCAACTGGACTGCCATGAA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGATATCCAGAGCTACATaGACCAGTCCTTGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRISRAT*TSPCFR
Trigger: CCGGAAACAAGGACTGGTCAATGTAGCTCTGGATAT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAATATCCAGAGCTACATaGACCAGTCCTTGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKISRAT*TSPCFR
Trigger: CCGGAAACAAGGACTGGTCAATGTAGCTCTGGATAT...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGGGAAAGTAGACCGCTaGGGGATACACGCGTCCAAC +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGGKVDR*GIHASN
Trigger: GTTGGACGCGTGTATCCCCAAGCGGTCTACTTTCCC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTTCGCCAGGCCCTGTaGGAGCTGCCTGAGAACCTC +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIFRQAL*ELPENL
Trigger: GAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAAA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACATGCCCTATCGGCCCCAGCCCCACCTAACTCTTGCTGAATTCTCCTCTCTTAATAATGCGTTGGCTTaGGCATCAGAAACTCCCCAG +
Preference number: 5 (lower is better)
Translates to: NMPYRPQPHLTLAEFSSLNNALA*ASETPQ
Trigger: CTGGGGAGTTTCTGATGCCAAAGCCAACGCATTATT...AAGAGAGGAGAATTCAGCAAGAGTTAGGTGGGGCTGGGGCCGATAGGGCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCGCCGGGCTGCGGTGTaGTGCTTCTGCACAATCTCT +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRRAAV*CFCTIS
Trigger: AGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGAAAGTGAAGAGGGGTaGTCCTCCACGAGGCGCATC +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKESEEG*SSTRRI
Trigger: GATGCGCCTCGTGGAGGACAACCCCTCTTCACTTTC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTCGAACTGGGCGAGGTaGTGCAGGCGGGTCATGATG +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSSNWAR*CRRVMM
Trigger: CATCATGACCCGCCTGCACAACCTCGCCCAGTTCGA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGATTGTCCAGGCTGTTaGCCGCGGCCACCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQDCPGC*PRPPGC
Trigger: ACACCCTGGTGGCCGCGGCAAACAGCCTGGACAATC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGATTGTCCAGGCTGTTaGCCGCGGCCACCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYDCPGC*PRPPGC
Trigger: ACACCCTGGTGGCCGCGGCAAACAGCCTGGACAATC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTCCATGCGGCACAGATaGTCCAGGCTGTTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYSMRHR*SRLFAA
Trigger: CGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTCCATGCGGCACAGATaGTCCAGGCTGTTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSMRHR*SRLFAA
Trigger: CGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATCCATGCGGCACAGATaGTCCAGGCTGTTTGCCGCG +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLSMRHR*SRLFAA
Trigger: CGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCCCCTTTACTGTGTGTaGATTGGGCACAGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSPLYCV*IGHSGS
Trigger: GGAGCCACTGTGCCCAATCAACACACAGTAAAGGGG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS GCA 90 bp CCAGTTAAGTCCATCATGACAAAGAGAAGTGCTTTCAGGAATGTCTaGTGGTTCTGGAGAACCCAAGTGAGAGGCAGCCGCTCCATGAGA +
Preference number: 5 (lower is better)
Translates to: PVKSIMTKRSAFRNV*WFWRTQVRGSRSMR
Trigger: TCTCATGGAGCGGCTGCCTCTCACTTGGGTTCTCCAGAACCAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATGATGGACTTAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp ATGCTTTCTGGGTTATCTCCTTCTGGATTGGGAGGTCCCAAGAGCTaGTCTCCTTCCCCCTTCTCAAAGCTGTACAAGAAAGCAGGATTC +
Preference number: 5 (lower is better)
Translates to: MLSGLSPSGLGGPKS*SPSPFSKLYKKAGF
Trigger: GAATCCTGCTTTCTTGTACAGCTTTGAGAAGGGGGAAGGAGAGCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAACCCAGAAAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CCGGGGCATGAACCGTGCAATCTTGATGTAATAATGCGTTGGCTTTaGCATCAGAAACTCCCCAGGAATTTCCACTTCAGCTGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: PGHEPCNLDVIMRWL*HQKLPRNFHFSCLC
Trigger: GCACAGACAGCTGAAGTGGAAATTCCTGGGGAGTTTCTGATGCCAAAGCCAACGCATTATTACATCAAGATTGCACGGTTCATGCCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCAGCGGTTCACTACTTTaGGAAGCTCCTTGTAAATCT +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTSGSLL*EAPCKS
Trigger: AGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGCT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTCATCGTCGATGTTCTaGGCGAAGAGCTGGACGGCG +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYSSSMF*AKSWTA
Trigger: CGCCGTCCAGCTCTTCGCCAAGAACATCGACGATGA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTCACAGTCTGGCAGTaGGCCACACGGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLTVWQ*ATRMYV
Trigger: GACATACATCCGTGTGGCCAACTGCCAGACTGTGAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTTGGAGAGCTCCACGTaGGAGCCCATTTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSLESST*EPISGR
Trigger: CCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCAA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGAGCCAAAGACCAGCTaGAACAGCTTGAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGEPKTS*NSLRYR
Trigger: CCTGTACCTCAAGCTGTTCAAGCTGGTCTTTGGCTC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAAGCATGTTCAGCCCTaGCAGGAGGTTTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGKHVQP*QEVWKE
Trigger: CTCCTTCCAAACCTCCTGCAAGGGCTGAACATGCTT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAAGTCGGGCTGCAGGTaGTCCACACACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQKSGCR*STHSSS
Trigger: GCTGGAGCTGTGTGTGGACAACCTGCAGCCCGACTT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGATGCTGTCAGCAGGGTaGCGTAAGGTGCGCCACAGA +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWMLSAG*RKVRHR
Trigger: TCTGTGGCGCACCTTACGCAACCCTGCTGACAGCAT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTATGCTGTCAGCAGGGTaGCGTAAGGTGCGCCACAGA +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSMLSAG*RKVRHR
Trigger: TCTGTGGCGCACCTTACGCAACCCTGCTGACAGCAT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCCATATGTGTGTGGATTaGATCGACTTCTATGGTAGC +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTHMCVD*IDFYGS
Trigger: GCTACCATAGAAGTCGATCAAATCCACACACATATG...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAACCACTTCCATCCACTaGCGCAGATGTTGCATCATC +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGTTSIH*RRCCII
Trigger: GATGATGCAACATCTGCGCAAGTGGATGGAAGTGGT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGTCGAGTCAGGAACTaGATCAGGGGCTCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSCRVRN*IRGSRN
Trigger: ATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGACA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAGGGTGATGAACCTGTaGGGGTTGGCAGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRVMNL*GLAAST
Trigger: TGTGCTGGCTGCCAACCCCAACAGGTTCATCACCCT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCTTGCGGTGCCTCTCTaGGAAGTTCTCACTCACCCA +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLAVPL*EVLTHP
Trigger: TGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAAG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTTGCGGTGCCTCTCTaGGAAGTTCTCACTCACCCA +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLAVPL*EVLTHP
Trigger: TGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTTGGGCTCCTTCCAGTaGGTGGCTGCCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLGSFQ*VAAMFS
Trigger: GGAGAACATGGCAGCCACCAACTGGAAGGAGCCCAA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACCGAAGTTGGGGTCGTaGAAGTCTACAAAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKPKLGS*KSTKRK
Trigger: CTTTCGCTTTGTAGACTTCAACGACCCCAACTTCGG...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAATTCATCTCCGAAGTaGGGGTCGTTGAAGTCTACA +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRNSSPK*GSLKST
Trigger: TGTAGACTTCAACGACCCCAACTTCGGAGATGAATT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTATGAGGCGGCGCAGCTaGCTGTTGCGGTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSMRRRS*LLRFLL
Trigger: CAACAAGAACCGCAACAGCAAGCTGCGCCGCCTCAT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAAGTGTCCGCTGTACTaGCAGGCTGGGTCCACGCAG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQKCPLY*QAGSTQ
Trigger: CTGCGTGGACCCAGCCTGCAAGTACAGCGGACACTT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATTGTGTATGGCGAATTaGGCGATAATGTGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKLCMAN*AIMCAR
Trigger: CCTGGCGCACATTATCGCCAAATTCGCCATACACAA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTCTTCTCCACTGGAATTaGGGTCCATATCTGAATCCG +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCLLHWN*GPYLNP
Trigger: CGGATTCAGATATGGACCCAAATTCCAGTGGAGAAG...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGCTTGAGTTCGGACTaGGGCCACATGTCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSLSSD*GHMSGR
Trigger: GCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTCGAACCACTGCAGCTaGAGTTCGGACTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSNHCS*SSDLGH
Trigger: GTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCCACGCTGCAGAGGTTaGAAGCTACTGAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGPRCRG*KLLRMA
Trigger: AGCCATCCTCAGTAGCTTCAAACCTCTGCAGCGTGG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACCACGCTGCAGAGGTTaGAAGCTACTGAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKPRCRG*KLLRMA
Trigger: AGCCATCCTCAGTAGCTTCAAACCTCTGCAGCGTGG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCACGCTGCAGAGGTTaGAAGCTACTGAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPRCRG*KLLRMA
Trigger: AGCCATCCTCAGTAGCTTCAAACCTCTGCAGCGTGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAAGAGCTGGGAGGGATaGGCATTGGTGGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIKSWEG*ALVAFS
Trigger: CGAGAAGGCCACCAATGCCAATCCCTCCCAGCTCTT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAAGAGCTGGGAGGGATaGGCATTGGTGGCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWKSWEG*ALVAFS
Trigger: CGAGAAGGCCACCAATGCCAATCCCTCCCAGCTCTT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTTGCTGCAGGCAGACTaGAGGATCATAAGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLLQAD*RIIRVP
Trigger: CGGGACCCTTATGATCCTCAAGTCTGCCTGCAGCAA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGACAGCCCGGAGGATTTaGGCATCTGGTGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASTARRI*ASGDFS
Trigger: CGAAAAATCACCAGATGCCAAAATCCTCCGGGCTGT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTTTCTGAAAGTTCTTaGGTTTTGGGCGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKFSESS*VLGVLV
Trigger: GACCAGCACGCCCAAAACCAAAGAACTTTCAGAAAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGTTTTCTGAAAGTTCTTaGGTTTTGGGCGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRFSESS*VLGVLV
Trigger: GACCAGCACGCCCAAAACCAAAGAACTTTCAGAAAA...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAGAGTGTCCAGAAACTaGTCGTGCCTGTTGGTTAGC +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASRVSRN*SCLLVS
Trigger: GCTAACCAACAGGCACGACAAGTTTCTGGACACTCT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGCTGTCTCCGAGTACTaGCACCGCTTCTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIAVSEY*HRFCHR
Trigger: TCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAGC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGCTGTCTCCGAGTACTaGCACCGCTTCTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSAVSEY*HRFCHR
Trigger: TCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAGC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACACTGGTTCAATTCCTaGGAGCATCGAATCCAGTGG +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGHWFNS*EHRIQW
Trigger: CCACTGGATTCGATGCTCCAAGGAATTGAACCAGTG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGGCTGTAAGCCTGCGTaGATTTGTGCAGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGGCKPA*ICAASW
Trigger: CCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTGCATGCACTCGTTTTaGCCCATGACGCCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYCMHSF*PMTPAS
Trigger: GCTGGCAGGCGTCATGGGCAAAAACGAGTGCATGCA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGAAAAGCCACAGCACCTaGGCTAAGTATTTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRKSHST*AKYFLD
Trigger: ATCGAGGAAATACTTAGCCAAGGTGCTGTGGCTTTT...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAACACCAATGCAGTACTaGTCGACGGCATCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKTPMQY*STASAK
Trigger: TTTGGCAGATGCCGTCGACAAGTACTGCATTGGTGT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGGGAAAGTAGACCGCTaGGGGATACACGCGTCCAAC +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSGKVDR*GIHASN
Trigger: GTTGGACGCGTGTATCCCCAAGCGGTCTACTTTCCC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGGGAAAGTAGACCGCTaGGGGATACACGCGTCCAAC +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIGKVDR*GIHASN
Trigger: GTTGGACGCGTGTATCCCCAAGCGGTCTACTTTCCC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCTGAAAGACAGGGTCTaGTGCAGTGGCCTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFLKDRV*CSGLRP
Trigger: CGGGCGCAGGCCACTGCACAAGACCCTGTCTTTCAG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGAGTTGCTTGGTCTaGGCCTCCAAGATTTTGATC +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGGSCLV*ASKILI
Trigger: GATCAAAATCTTGGAGGCCAAGACCAAGCAACTCCC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGTCTGTGCCGAGAAATaGCTCAAGAACCGGCACTTT +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGVCAEK*LKNRHF
Trigger: AAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGAC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTAATAATGCGTTGGCTTaGGCATCAGAAACTCCCCAG +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCNNALA*ASETPQ
Trigger: CTGGGGAGTTTCTGATGCCAAAGCCAACGCATTATT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGAAAGTGAAGAGGGGTaGTCCTCCACGAGGCGCATC +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIESEEG*SSTRRI
Trigger: GATGCGCCTCGTGGAGGACAACCCCTCTTCACTTTC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAATGGGACAGGACGGTaGGCATCCAGGTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYNGTGR*ASRSPV
Trigger: GACTGGAGACCTGGATGCCAACCGTCCTGTCCCATT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAATGGGACAGGACGGTaGGCATCCAGGTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPNGTGR*ASRSPV
Trigger: GACTGGAGACCTGGATGCCAACCGTCCTGTCCCATT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAATGGGACAGGACGGTaGGCATCCAGGTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWNGTGR*ASRSPV
Trigger: GACTGGAGACCTGGATGCCAACCGTCCTGTCCCATT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTCGAACTGGGCGAGGTaGTGCAGGCGGGTCATGATG +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSNWAR*CRRVMM
Trigger: CATCATGACCCGCCTGCACAACCTCGCCCAGTTCGA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATACCAGGGTGTTCACCTaGCTTTCCCCGCCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYTRVFT*LSPPSN
Trigger: GTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGGT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCGTACAGCCTAAAACTTaGTGCTCAGAGAAAAACCAG +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTVQPKT*CSEKNQ
Trigger: CTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTAC...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCACTGCACCCAGCAGGGGTTGAACTTTTTAAGCCAATTGCGGAAACATGCCCTGACCTGCGGGTTTGCTaGAAATGGTGTTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: PLHPAGVELFKPIAETCPDLRVC*KWCLEK
Trigger: TTTCTCCAAACACCATTTCAAGCAAACCCGCAGGTC...AGGGCATGTTTCCGCAATTGGCTTAAAAAGTTCAACCCCTGCTGGGTGCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGAGGAGACCTGCGGGTTaGCTTGAAATGGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASRRPAG*LEMVFG
Trigger: TCCAAACACCATTTCAAGCAAACCCGCAGGTCTCCT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACTGTCTTGCCTGTCCTaGGCCTTGAGGTTGGTCCTA +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKLSCLS*ALRLVL
Trigger: TAGGACCAACCTCAAGGCCAAGGACAGGCAAGACAG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS GCA 90 bp AATAACTTCAAGGCCCTGCATGCACTCGTTTTTGCCCATGACGCCTaGCAGCTGGAGGTAGCATTTAACTTGCTGTCGAATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: NNFKALHALVFAHDA*QLEVAFNLLSNLLE
Trigger: TTCCAGAAGATTCGACAGCAAGTTAAATGCTACCTCCAGCTGGCAGGCGTCATGGGCAAAAACGAGTGCATGCAGGGCCTTGAAGTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CGGGTTGACTTTCACAGCAATCGTTGTTATCATACCAACCATTTCTaGGGGAGGCACTGTGTTCTCGGGGATCACTTGAGGGTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: RVDFHSNRCYHTNHF*GRHCVLGDHLRVLK
Trigger: TTTGAGAACCCTCAAGTGATCCCCGAGAACACAGTGCCTCCCCCAGAAATGGTTGGTATGATAACAACGATTGCTGTGAAAGTCAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GTTAAGTCCATCATGACAAAGAGAAGTGCTTTCAGGAATGTCTGCTaGTTCTGGAGAACCCAAGTGAGAGGCAGCCGCTCCATGAGAAAC +
Preference number: 5 (lower is better)
Translates to: VKSIMTKRSAFRNVC*FWRTQVRGSRSMRN
Trigger: GTTTCTCATGGAGCGGCTGCCTCTCACTTGGGTTCTCCAGAACCAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATGATGGACTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CTTGGTAATAAACACACTGGTGATGCTTTCTGGGTTATCTCCTTCTaGATTGGGAGGTCCCAAGAGCTGCTCTCCTTCCCCCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: LGNKHTGDAFWVISF*IGRSQELLSFPLLK
Trigger: TTTGAGAAGGGGGAAGGAGAGCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAACCCAGAAAGCATCACCAGTGTGTTTATTACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CTCTACCCGGGGCATGAACCGTGCAATCTTGATGTAATAATGCGTTaGCTTTGGCATCAGAAACTCCCCAGGAATTTCCACTTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: LYPGHEPCNLDVIMR*LWHQKLPRNFHFSC
Trigger: ACAGCTGAAGTGGAAATTCCTGGGGAGTTTCTGATGCCAAAGCCAACGCATTATTACATCAAGATTGCACGGTTCATGCCCCGGGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp AGTAGAGATACGTGCTATCCCCCTAGTGCCTGCACGGTGGGGAACTaGATACCTTGGAACTGGGAATTATCTTGGATCCCATATTTAGTG +
Preference number: 5 (lower is better)
Translates to: SRDTCYPPSACTVGN*IPWNWELSWIPYLV
Trigger: CACTAAATATGGGATCCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGCACTAGGGGGATAGCACGTATCTCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCTTCTTTTGGGCTGGTTaGCTTCTCAAGAGAAAAGTA +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTFFWAG*LLKRKV
Trigger: TACTTTTCTCTTGAGAAGCAAACCAGCCCAAAAGAA...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCCGTGGCCCCCTGTGTaGCAACAAACGCCATTTTTC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYPWPPV*QQTPFF
Trigger: GAAAAATGGCGTTTGTTGCAACACAGGGGGCCACGG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAATCCTCACGCTCCGGGTaGACTTTCACAGCAATCGTT +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSSRSG*TFTAIV
Trigger: AACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGGA...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGTGGTGAGGATGTGTTaGGCAGCAATCAGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGVVRMC*AAIRSS
Trigger: GGAGCTTCTGATTGCTGCCAAACACATCCTCACCAC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACTTGTCCTTTTCTCCTaGCTTCTCGAAGGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKLVLFS*LLEGRH
Trigger: GTGCCTCCCTTCGAGAAGCAAGGAGAAAAGGACAAG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTTGTCCTTTTCTCCTaGCTTCTCGAAGGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLVLFS*LLEGRH
Trigger: GTGCCTCCCTTCGAGAAGCAAGGAGAAAAGGACAAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATCGACAGTCTGTGACTaGGAATGTCTGCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSTVCD*ECLLVF
Trigger: GAAGACAAGCAGACATTCCAAGTCACAGACTGTCGA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCTCACAGTCTGGCAGTaGGCCACACGGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLTVWQ*ATRMYV
Trigger: GACATACATCCGTGTGGCCAACTGCCAGACTGTGAG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGACACCATAAGGGACCGTAGTTaGGAAGATTTCTTTGAACGT +
Preference number: 5 (lower is better)
Translates to: WKGAVRTVPPVHSQREDTIRDRS*EDFFER
Trigger: ACGTTCAAAGAAATCTTCCAAACTACGGTCCCTTAT...GGTGTCCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATTGGAGAGCTCCACGTaGGAGCCCATTTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQLESST*EPISGR
Trigger: CCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCAA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTGGAGAGCTCCACGTaGGAGCCCATTTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLLESST*EPISGR
Trigger: CCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCAA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGAGCCAAAGACCAGCTaGAACAGCTTGAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGEPKTS*NSLRYR
Trigger: CCTGTACCTCAAGCTGTTCAAGCTGGTCTTTGGCTC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAAGTGAGGCTTCAGCATTaGTTCATTTTCAGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKVRLQH*FIFSCK
Trigger: TTTGCAGCTGAAAATGAACAAATGCTGAAGCCTCAC...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGAGCTGGAGAGAAGCTTaGCAGTCGGAAAACTCCACA +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGSWREA*QSENST
Trigger: TGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGCT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCCACCAGGAAGCATTaGATCACTTCCCACGCCTGC +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQATRKH*ITSHAC
Trigger: GCAGGCGTGGGAAGTGATCAAATGCTTCCTGGTGGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCCACCAGGAAGCATTaGATCACTTCCCACGCCTGC +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYATRKH*ITSHAC
Trigger: GCAGGCGTGGGAAGTGATCAAATGCTTCCTGGTGGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGTCTTTTCTGTAAAGTaGGGGTGTGCCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGVFSVK*GCARSW
Trigger: CCAGCTCCTGGCACACCCCAACTTTACAGAAAAGAC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTCCTGCAGGACCTCTTaGTGGGGTTCCATGATCACC +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSCRTS*WGSMIT
Trigger: GGTGATCATGGAACCCCACAAAGAGGTCCTGCAGGA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTCCTGCAGGACCTCTTaGTGGGGTTCCATGATCACC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYSCRTS*WGSMIT
Trigger: GGTGATCATGGAACCCCACAAAGAGGTCCTGCAGGA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAGTGGAATTCAGGGCTTaGAAGAGTGCAGCGATGATT +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKVEFRA*KSAAMI
Trigger: AATCATCGCTGCACTCTTCAAAGCCCTGAATTCCAC...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTATAATGCTTATGATCTaGATGGCCTGGAACTGGAGG +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCIMLMI*MAWNWR
Trigger: CCTCCAGTTCCAGGCCATCAAGATCATAAGCATTAT...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACTTGCGGTGCCTCTCTaGGAAGTTCTCACTCACCCA +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLAVPL*EVLTHP
Trigger: TGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAAG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTGCGGTTCTTGTTGTaGTCATGGATGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLRFLL*SWMWWG
Trigger: CCCCCACCACATCCATGACAACAACAAGAACCGCAA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCCTGTTGCGGTTCTTGTaGTTGTCATGGATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSLLRFL*LSWMWW
Trigger: CCACCACATCCATGACAACAACAAGAACCGCAACAG...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTTGTGTATGGCGAATTaGGCGATAATGTGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSLCMAN*AIMCAR
Trigger: CCTGGCGCACATTATCGCCAAATTCGCCATACACAA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCTGCAGGACGATCTTCTaGTGTATGGCGAATTTGGCG +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSCRTIF*CMANLA
Trigger: CGCCAAATTCGCCATACACAAGAAGATCGTCCTGCA...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGTACACCTTGAAGTGTaGCACTATCAGGTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCVHLEV*HYQVQN
Trigger: ATTCTGCACCTGATAGTGCAACACTTCAAGGTGTAC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCTCTGCAGCTCCCACTaGATGACGACTTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLCSSH*MTTSDR
Trigger: CCTGTCTGAAGTCGTCATCAAGTGGGAGCTGCAGAG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACTCTGCAGCTCCCACTaGATGACGACTTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLCSSH*MTTSDR
Trigger: CCTGTCTGAAGTCGTCATCAAGTGGGAGCTGCAGAG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGACTTCTCCACTGGAATTaGGGTCCATATCTGAATCCG +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGLLHWN*GPYLNP
Trigger: CGGATTCAGATATGGACCCAAATTCCAGTGGAGAAG...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGAGGATGAGACAGAATaGACTCCTTCTCCACTGGAA +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGEDETE*TPSPLE
Trigger: TTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCTC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGTGTCTGTGTGCTGCTaGTCAATGGGCTTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQVSVCC*SMGLAR
Trigger: CCTCGCCAAGCCCATTGACAAGCAGCACACAGACAC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATCGAACCACTGCAGCTaGAGTTCGGACTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLSNHCS*SSDLGH
Trigger: GTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAATTCCCATAGTTCACTaGGTTTGGCTGCTCCACAGT +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGIPIVH*VWLLHS
Trigger: ACTGTGGAGCAGCCAAACCAAGTGAACTATGGGAAT...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAGCTTGGAATAAGTTTCAGCTCTGCCATTTCCAACCGCTTCGCCCAGCATCGATTCCCATAGTTCACTaGGTTTGGCTGCTCCACAGT +
Preference number: 5 (lower is better)
Translates to: KAWNKFQLCHFQPLRPASIPIVH*VWLLHS
Trigger: ACTGTGGAGCAGCCAAACCAAGTGAACTATGGGAAT...CGATGCTGGGCGAAGCGGTTGGAAATGGCAGAGCTGAAACTTATTCCAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCACGGCTCGCAACACCTaGGTGTTTCCACATGTCATG +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGTARNT*VFPHVM
Trigger: CATGACATGTGGAAACACCAAGGTGTTGCGAGCCGT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATCCAGCTCTTCATATTaGGAGGCCACACTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGSSSSY*EATLEV
Trigger: TACTTCCAGTGTGGCCTCCAAATATGAAGAGCTGGA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAATCCAGCTCTTCATATTaGGAGGCCACACTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKSSSSY*EATLEV
Trigger: TACTTCCAGTGTGGCCTCCAAATATGAAGAGCTGGA...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGCGACGTTTCATGGAGTaGTCAAAAACCTCGAAAAAC +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGRRRFME*SKTSKN
Trigger: GTTTTTCGAGGTTTTTGACAACTCCATGAAACGTCG...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAGCTCAATGCACTGCTaGATCCAGAAGTGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSSMHC*IQKWFP
Trigger: GGGGAACCACTTCTGGATCAAGCAGTGCATTGAGCT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCCAGGTTGATGACGTaGGTGATGGACGGGAGCATG +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSARLMT*VMDGSM
Trigger: CATGCTCCCGTCCATCACCAACGTCATCAACCTGGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTGGCTATCGGCCAGGTaGATGACGTTGGTGATGGAC +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPWLSAR*MTLVMD
Trigger: GTCCATCACCAACGTCATCAACCTGGCCGATAGCCA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTGGCTATCGGCCAGGTaGATGACGTTGGTGATGGAC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWWLSAR*MTLVMD
Trigger: GTCCATCACCAACGTCATCAACCTGGCCGATAGCCA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTCTACATCCTCCTCTTaGGACTCGCTGTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWSTSSS*DSLFSR
Trigger: GCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAGA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGACCGGAACCAGAGGTaGTGTGTCTTCCCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSDRNQR*CVFPRY
Trigger: GTACCTGGGGAAGACACACAACCTCTGGTTCCGGTC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCTGTCTCCGAGTACTaGCACCGCTTCTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQAVSEY*HRFCHR
Trigger: TCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGGCTGTAAGCCTGCGTaGATTTGTGCAGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIGCKPA*ICAASW
Trigger: CCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGGCTGTAAGCCTGCGTaGATTTGTGCAGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPGCKPA*ICAASW
Trigger: CCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGATACATTGACCAGTCCTaGTTTCCGGGCGATTTTTCC +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGYIDQS*FPGDFS
Trigger: GGAAAAATCGCCCGGAAACAAGGACTGGTCAATGTA...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGGGAGGTAGCATTTAACTaGCTGTCGAATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: MDGRELFVQFRLYIHRGREVAFN*LSNLLE
Trigger: TTCCAGAAGATTCGACAGCAAGTTAAATGCTACCTC...CCTCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTGCATGCACTCGTTTTaGCCCATGACGCCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYCMHSF*PMTPAS
Trigger: GCTGGCAGGCGTCATGGGCAAAAACGAGTGCATGCA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCCACATGGGTGCTGTaGCTCTTATGGGCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYATWVL*LLWALD
Trigger: ATCCAGGGCCCATAAGAGCAACAGCACCCATGTGGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTTTCGCCAGGCCCTGTaGGAGCTGCCTGAGAACCTC +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFFRQAL*ELPENL
Trigger: GAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAAA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAACATGGTCGAGACGTaGGACACATTCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWNMVET*DTFSRP
Trigger: GGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTCTATGAGGAAGAATTaGGGGAGTTGCTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCSMRKN*GSCLVL
Trigger: CAAGACCAAGCAACTCCCCAAATTCTTCCTCATAGA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCGCCGGGCTGCGGTGTaGTGCTTCTGCACAATCTCT +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFRRAAV*CFCTIS
Trigger: AGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGAAAGTGAAGAGGGGTaGTCCTCCACGAGGCGCATC +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSESEEG*SSTRRI
Trigger: GATGCGCCTCGTGGAGGACAACCCCTCTTCACTTTC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATGTAACATCTCGGGGTaGAGTCTATTTAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKCNISG*SLFKCR
Trigger: CCTGCATTTAAATAGACTCAACCCCGAGATGTTACA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCAATGGGACAGGACGGTaGGCATCCAGGTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSNGTGR*ASRSPV
Trigger: GACTGGAGACCTGGATGCCAACCGTCCTGTCCCATT...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAACCAGGGACACCAGTaGCTGGCTGTCCATGTTCTC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYNQGHQ*LAVHVL
Trigger: GAGAACATGGACAGCCAGCAACTGGTGTCCCTGGTT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTGAACTGGGAAGTAACTaGAGTCCAGTCAGACCGGCA +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGELGSN*SPVRPA
Trigger: TGCCGGTCTGACTGGACTCAAGTTACTTCCCAGTTC...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCGGGGTTTTGCCATGTaGCCCAGGCTGGCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFRGFAM*PRLALN
Trigger: GTTCAAGGCCAGCCTGGGCAACATGGCAAAACCCCG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCATCACCAGCTCGCTaGTACCTGCTGAGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSASPAR*YLLRWL
Trigger: AAGCCACCTCAGCAGGTACAAGCGAGCTGGTGATGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS GCA 90 bp CTTTGGCATCAGAAACTCCCCAGGAATTTCCACTTCAGCTGTCTGTaGCGAGAAATTGCTCAAGAACCGGCACTTTTCCTCTATGAGGAA +
Preference number: 5 (lower is better)
Translates to: LWHQKLPRNFHFSCL*REIAQEPALFLYEE
Trigger: TTCCTCATAGAGGAAAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGACAGCTGAAGTGGAAATTCCTGGGGAGTTTCTGATGCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CAGTCTTCACCTCTCGGAGAGTGTCCAGAAACTTGTCGTGCCTGTTaGTTAGCATGTGCAGCTGGTTTCCAATGTCCTTTTCTGAAAGTT +
Preference number: 5 (lower is better)
Translates to: QSSPLGECPETCRAC*LACAAGFQCPFLKV
Trigger: AACTTTCAGAAAAGGACATTGGAAACCAGCTGCACATGCTAACCAACAGGCACGACAAGTTTCTGGACACTCTCCGAGAGGTGAAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATACGAGCTTCCGCAGTaGCTGTGCTGGTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSYELPQ*LCWFLL
Trigger: CAGGAGAAACCAGCACAGCAACTGCGGAAGCTCGTA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGTGGTGAGGATGTGTTaGGCAGCAATCAGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWVVRMC*AAIRSS
Trigger: GGAGCTTCTGATTGCTGCCAAACACATCCTCACCAC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCATCGTCGATGTTCTaGGCGAAGAGCTGGACGGCG +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSSSMF*AKSWTA
Trigger: CGCCGTCCAGCTCTTCGCCAAGAACATCGACGATGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACCCCACGTGATTGTCTaGACACCACACACCAAGGTT +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIPHVIV*TPHTKV
Trigger: AACCTTGGTGTGTGGTGTCAAGACAATCACGTGGGG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCCCCACGTGATTGTCTaGACACCACACACCAAGGTT +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPPHVIV*TPHTKV
Trigger: AACCTTGGTGTGTGGTGTCAAGACAATCACGTGGGG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAGCTGGAGAGAAGCTTaGCAGTCGGAAAACTCCACA +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKSWREA*QSENST
Trigger: TGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGCT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGTCTTTTCTGTAAAGTaGGGGTGTGCCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSVFSVK*GCARSW
Trigger: CCAGCTCCTGGCACACCCCAACTTTACAGAAAAGAC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCGTCTTTTAAAGGCGTaGCGCACCGCATCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPRLLKA*RTASEA
Trigger: AGCTTCTGATGCGGTGCGCAACGCCTTTAAAAGACG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGCTTCTCCGGCCTCTaGGAGCTCACTATTGGTGGA +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGFSGL*ELTIGG
Trigger: TCCACCAATAGTGAGCTCCAAGAGGCCGGAGAAGCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAACCACTTCCATCCACTaGCGCAGATGTTGCATCATC +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKTTSIH*RRCCII
Trigger: GATGATGCAACATCTGCGCAAGTGGATGGAAGTGGT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTAGGGTGATGAACCTGTaGGGGTTGGCAGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTRVMNL*GLAAST
Trigger: TGTGCTGGCTGCCAACCCCAACAGGTTCATCACCCT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGCCATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAAATAATGCTTATGATCTaGATGGCCTGGAACTGGAGG +
Preference number: 5 (lower is better)
Translates to: LPFPTASPSIVIVQLPLKIMLMI*MAWNWR
Trigger: CCTCCAGTTCCAGGCCATCAAGATCATAAGCATTAT...TTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAATGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACTTGCGGTGCCTCTCTaGGAAGTTCTCACTCACCCA +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQLAVPL*EVLTHP
Trigger: TGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAAG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTTGGGCTCCTTCCAGTaGGTGGCTGCCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLGSFQ*VAAMFS
Trigger: GGAGAACATGGCAGCCACCAACTGGAAGGAGCCCAA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTTGGGCTCCTTCCAGTaGGTGGCTGCCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFLGSFQ*VAAMFS
Trigger: GGAGAACATGGCAGCCACCAACTGGAAGGAGCCCAA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTTATCTCCTTCTGGATaGGGAGGTCCCAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYLSPSG*GGPKSC
Trigger: GCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTCGGGGTCCAGGACCTaGGTAATAAACACACTGGTG +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWSGSRT*VINTLV
Trigger: CACCAGTGTGTTTATTACCAAGGTCCTGGACCCCGA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGTACACCTTGAAGTGTaGCACTATCAGGTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGVHLEV*HYQVQN
Trigger: ATTCTGCACCTGATAGTGCAACACTTCAAGGTGTAC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCGAGGATGAGACAGAATaGACTCCTTCTCCACTGGAA +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSEDETE*TPSPLE
Trigger: TTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCTC...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTGCTTGTCAATGGGCTaGGCGAGGAGAGAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYCLSMG*ARRESA
Trigger: AGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGCA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCGAACCACTGCAGCTaGAGTTCGGACTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSNHCS*SSDLGH
Trigger: GTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGACAGTCATCAGCAGCTaGTCGAACCACTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWTVISS*SNHCSL
Trigger: CAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCATTCTTCCACGATTTaGACCACAGCCCGGAGGATT +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGHSSTI*TTARRI
Trigger: AATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAATG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAGCTCAATGCACTGCTaGATCCAGAAGTGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSSMHC*IQKWFP
Trigger: GGGGAACCACTTCTGGATCAAGCAGTGCATTGAGCT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGCCAGGTTGATGACGTaGGTGATGGACGGGAGCATG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFARLMT*VMDGSM
Trigger: CATGCTCCCGTCCATCACCAACGTCATCAACCTGGC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCTACATCCTCCTCTTaGGACTCGCTGTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSTSSS*DSLFSR
Trigger: GCGGGAGAACAGCGAGTCCAAAGAGGAGGATGTAGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTGCGGGTTTGCTTGAAATGGTGTTTGGAGAAAAAGGGCATATTGTCTGCATGCACTGGTTCAATTCCTaGGAGCATCGAATCCAGTGG +
Preference number: 5 (lower is better)
Translates to: PAGLLEMVFGEKGHIVCMHWFNS*EHRIQW
Trigger: CCACTGGATTCGATGCTCCAAGGAATTGAACCAGTG...CATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGCAAACCCGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGGCTGTAAGCCTGCGTaGATTTGTGCAGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSGCKPA*ICAASW
Trigger: CCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAATGTCGTGCAGGCTGTaGTTCCTTCCCAGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLMSCRL*FLPRLV
Trigger: AACCAACCTGGGAAGGAACAACAGCCTGCACGACAT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGAGGTAGCATTTAACTaGCTGTCGAATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCEVAFN*LSNLLE
Trigger: TTCCAGAAGATTCGACAGCAAGTTAAATGCTACCTC...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGCTGCAGAGAAGGCTTaGTTTGCCTCCTCGGACTTG +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLAAEKA*FASSDL
Trigger: CAAGTCCGAGGAGGCAAACAAAGCCTTCTCTGCAGC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGCTGCAGAGAAGGCTTaGTTTGCCTCCTCGGACTTG +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYAAEKA*FASSDL
Trigger: CAAGTCCGAGGAGGCAAACAAAGCCTTCTCTGCAGC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCTGCAGAGAAGGCTTaGTTTGCCTCCTCGGACTTG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQAAEKA*FASSDL
Trigger: CAAGTCCGAGGAGGCAAACAAAGCCTTCTCTGCAGC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGGAAAGTAGACCGCTaGGGGATACACGCGTCCAAC +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGKVDR*GIHASN
Trigger: GTTGGACGCGTGTATCCCCAAGCGGTCTACTTTCCC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGGGAAAGTAGACCGCTaGGGGATACACGCGTCCAAC +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFGKVDR*GIHASN
Trigger: GTTGGACGCGTGTATCCCCAAGCGGTCTACTTTCCC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGCCACATGGGTGCTGTaGCTCTTATGGGCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTATWVL*LLWALD
Trigger: ATCCAGGGCCCATAAGAGCAACAGCACCCATGTGGC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCAACATGGTCGAGACGTaGGACACATTCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSNMVET*DTFSRP
Trigger: GGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTT...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAACATGGTCGAGACGTaGGACACATTCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYNMVET*DTFSRP
Trigger: GGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGTCTGTGCCGAGAAATaGCTCAAGAACCGGCACTTT +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKVCAEK*LKNRHF
Trigger: AAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGAC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCAATAATGCGTTGGCTTaGGCATCAGAAACTCCCCAG +
Preference number: 5 (lower is better)
Translates to: FPRLAVYSLKLCAQRKTSNNALA*ASETPQ
Trigger: CTGGGGAGTTTCTGATGCCAAAGCCAACGCATTATT...GCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTTGTAACATCTCGGGGTaGAGTCTATTTAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: AERSTRFPRLAVYSLKLCCNISG*SLFKCR
Trigger: CCTGCATTTAAATAGACTCAACCCCGAGATGTTACA...ACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAACCAGGGACACCAGTaGCTGGCTGTCCATGTTCTC +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLNQGHQ*LAVHVL
Trigger: GAGAACATGGACAGCCAGCAACTGGTGTCCCTGGTT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp TCCATCATGACAAAGAGAAGTGCTTTCAGGAATGTCTGCTGGTTCTaGAGAACCCAAGTGAGAGGCAGCCGCTCCATGAGAAACTTAATA +
Preference number: 5 (lower is better)
Translates to: SIMTKRSAFRNVCWF*RTQVRGSRSMRNLI
Trigger: TATTAAGTTTCTCATGGAGCGGCTGCCTCTCACTTGGGTTCTCCAGAACCAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp AGAGTGTCCAGAAACTTGTCGTGCCTGTTGGTTAGCATGTGCAGCTaGTTTCCAATGTCCTTTTCTGAAAGTTCTTTGGTTTTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: RVSRNLSCLLVSMCS*FPMSFSESSLVLGV
Trigger: CACGCCCAAAACCAAAGAACTTTCAGAAAAGGACATTGGAAACCAGCTGCACATGCTAACCAACAGGCACGACAAGTTTCTGGACACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp GGGGTACCTCCTTTATGGTACTGTAGACATACATTTAGGCTAATGTaGCCATCAGCAAGTTTGACACAGCTAGCTAGGTACCTGGTTACG +
Preference number: 5 (lower is better)
Translates to: GVPPLWYCRHTFRLM*PSASLTQLARYLVT
Trigger: CGTAACCAGGTACCTAGCTAGCTGTGTCAAACTTGCTGATGGCCACATTAGCCTAAATGTATGTCTACAGTACCATAAAGGAGGTACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTACGAGCTTCCGCAGTaGCTGTGCTGGTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFYELPQ*LCWFLL
Trigger: CAGGAGAAACCAGCACAGCAACTGCGGAAGCTCGTA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATCCTCACGCTCCGGGTaGACTTTCACAGCAATCGTT +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSSSRSG*TFTAIV
Trigger: AACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGGA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTACTTGTCCTTTTCTCCTaGCTTCTCGAAGGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLLVLFS*LLEGRH
Trigger: GTGCCTCCCTTCGAGAAGCAAGGAGAAAAGGACAAG...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACCACACACCAAGGTTTaGACCAAACTTCGACAGTCT +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKPHTKV*TKLRQS
Trigger: AGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTGG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCCACACACCAAGGTTTaGACCAAACTTCGACAGTCT +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGPHTKV*TKLRQS
Trigger: AGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTGG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGCATGTTCAGCCCTaGCAGGAGGTTTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSKHVQP*QEVWKE
Trigger: CTCCTTCCAAACCTCCTGCAAGGGCTGAACATGCTT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAAGCATGTTCAGCCCTaGCAGGAGGTTTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLKHVQP*QEVWKE
Trigger: CTCCTTCCAAACCTCCTGCAAGGGCTGAACATGCTT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAAGCATGTTCAGCCCTaGCAGGAGGTTTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQKHVQP*QEVWKE
Trigger: CTCCTTCCAAACCTCCTGCAAGGGCTGAACATGCTT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAGCTGGAGAGAAGCTTaGCAGTCGGAAAACTCCACA +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWSWREA*QSENST
Trigger: TGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGCT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGTCTTTTCTGTAAAGTaGGGGTGTGCCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSVFSVK*GCARSW
Trigger: CCAGCTCCTGGCACACCCCAACTTTACAGAAAAGAC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGCCACCTCCCCGATTTaGCAAAGCTCCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSATSPI*QSSFSS
Trigger: TGAAGAAAAGGAGCTTTGCAAAATCGGGGAGGTGGC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGATAGCGACTGCCCCATaGGAAACCTCTCCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPIATAP*ETSPVK
Trigger: CTTAACTGGAGAGGTTTCCAATGGGGCAGTCGCTAT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTATAGCGACTGCCCCATaGGAAACCTCTCCAGTTAAG +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSIATAP*ETSPVK
Trigger: CTTAACTGGAGAGGTTTCCAATGGGGCAGTCGCTAT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCCTGCAGGACCTCTTaGTGGGGTTCCATGATCACC +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSCRTS*WGSMIT
Trigger: GGTGATCATGGAACCCCACAAAGAGGTCCTGCAGGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTCTTGGAGCTCACTATaGGTGGAATTCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGSWSSL*VEFRAL
Trigger: CAAAGCCCTGAATTCCACCAATAGTGAGCTCCAAGA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAACCACTTCCATCCACTaGCGCAGATGTTGCATCATC +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTITTSIH*RRCCII
Trigger: GATGATGCAACATCTGCGCAAGTGGATGGAAGTGGT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATGTCGAGTCAGGAACTaGATCAGGGGCTCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQCRVRN*IRGSRN
Trigger: ATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGACA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCCGAAGTTGGGGTCGTaGAAGTCTACAAAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPPKLGS*KSTKRK
Trigger: CTTTCGCTTTGTAGACTTCAACGACCCCAACTTCGG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATTATCTCCTTCTGGATaGGGAGGTCCCAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQLSPSG*GGPKSC
Trigger: GCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATTGCGGTTCTTGTTGTaGTCATGGATGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSLRFLL*SWMWWG
Trigger: CCCCCACCACATCCATGACAACAACAAGAACCGCAA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTGCGGTTCTTGTTGTaGTCATGGATGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLLRFLL*SWMWWG
Trigger: CCCCCACCACATCCATGACAACAACAAGAACCGCAA...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACTGTTGCGGTTCTTGTaGTTGTCATGGATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLLLRFL*LSWMWW
Trigger: CCACCACATCCATGACAACAACAAGAACCGCAACAG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACTGTTGCGGTTCTTGTaGTTGTCATGGATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTILLRFL*LSWMWW
Trigger: CCACCACATCCATGACAACAACAAGAACCGCAACAG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCGGCGCAGCTTGCTGTaGCGGTTCTTGTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFRRSLL*RFLLLS
Trigger: TGACAACAACAAGAACCGCAACAGCAAGCTGCGCCG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGAGGATGAGACAGAATaGACTCCTTCTCCACTGGAA +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKEDETE*TPSPLE
Trigger: TTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCTC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGCTTGTCAATGGGCTaGGCGAGGAGAGAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFCLSMG*ARRESA
Trigger: AGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGCA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAACAGTCATCAGCAGCTaGTCGAACCACTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQTVISS*SNHCSL
Trigger: CAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATACAGTCATCAGCAGCTaGTCGAACCACTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYTVISS*SNHCSL
Trigger: CAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAACATAGTTCACTTGGTTaGGCTGCTCCACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKHSSLG*AAPQSS
Trigger: TGATGACTGTGGAGCAGCCAAACCAAGTGAACTATG...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAACGGCTCGCAACACCTaGGTGTTTCCACATGTCATG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQTARNT*VFPHVM
Trigger: CATGACATGTGGAAACACCAAGGTGTTGCGAGCCGT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAAGTACTCGGCTCTGTaGGGAAAATGCTCATCAGGC +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLKYSAL*GKCSSG
Trigger: GCCTGATGAGCATTTTCCCAACAGAGCCGAGTACTT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCATTCTTCCACGATTTaGACCACAGCCCGGAGGATT +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSHSSTI*TTARRI
Trigger: AATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAATG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACATTCTTCCACGATTTaGACCACAGCCCGGAGGATT +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLHSSTI*TTARRI
Trigger: AATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAATG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATACATTCTTCCACGATTTaGACCACAGCCCGGAGGATT +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIHSSTI*TTARRI
Trigger: AATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAATG...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGGCTATCGGCCAGGTaGATGACGTTGGTGATGGAC +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFWLSAR*MTLVMD
Trigger: GTCCATCACCAACGTCATCAACCTGGCCGATAGCCA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTAGAGTGTCCAGAAACTaGTCGTGCCTGTTGGTTAGC +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSRVSRN*SCLLVS
Trigger: GCTAACCAACAGGCACGACAAGTTTCTGGACACTCT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATATGTCGTGCAGGCTGTaGTTCCTTCCCAGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYMSCRL*FLPRLV
Trigger: AACCAACCTGGGAAGGAACAACAGCCTGCACGACAT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCATATCCAGAGCTACATaGACCAGTCCTTGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGISRAT*TSPCFR
Trigger: CCGGAAACAAGGACTGGTCAATGTAGCTCTGGATAT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGCTGCAGAGAAGGCTTaGTTTGCCTCCTCGGACTTG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFAAEKA*FASSDL
Trigger: CAAGTCCGAGGAGGCAAACAAAGCCTTCTCTGCAGC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGACACCAATGCAGTACTaGTCGACGGCATCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWTPMQY*STASAK
Trigger: TTTGGCAGATGCCGTCGACAAGTACTGCATTGGTGT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATACACCAATGCAGTACTaGTCGACGGCATCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYTPMQY*STASAK
Trigger: TTTGGCAGATGCCGTCGACAAGTACTGCATTGGTGT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTAACATGGTCGAGACGTaGGACACATTCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTNMVET*DTFSRP
Trigger: GGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATCCACGCCGAACGCTCAACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAATTGGCCTCCAAGATTTaGATCCACTTTTTCAACTTA +
Preference number: 5 (lower is better)
Translates to: IHAERSTRFPRLAVYSLKLASKI*IHFFNL
Trigger: TAAGTTGAAAAAGTGGATCAAAATCTTGGAGGCCAA...TTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTTGAGCGTTCGGCGTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGGAGTTGCTTGGTCTaGGCCTCCAAGATTTTGATC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWGSCLV*ASKILI
Trigger: GATCAAAATCTTGGAGGCCAAGACCAAGCAACTCCC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAATTTGGGGAGTTGCTaGGTCTTGGCCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKNLGSC*VLASKI
Trigger: AATCTTGGAGGCCAAGACCAAGCAACTCCCCAAATT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGAAGAATTTGGGGAGTaGCTTGGTCTTGGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWEEFGE*LGLGLQ
Trigger: TTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTC...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGAAGAATTTGGGGAGTaGCTTGGTCTTGGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIEEFGE*LGLGLQ
Trigger: TTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGTCTGTGCCGAGAAATaGCTCAAGAACCGGCACTTT +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIVCAEK*LKNRHF
Trigger: AAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGAC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTGTCTGTGCCGAGAAATaGCTCAAGAACCGGCACTTT +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSVCAEK*LKNRHF
Trigger: AAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGAC...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAATGGATGGAAGGGAGCTGTTCGTACAGTTCCGCCTGTACATTCACAGAGGGAGTACAGCCTAAAACTTaGTGCTCAGAGAAAAACCAG +
Preference number: 5 (lower is better)
Translates to: KWMEGSCSYSSACTFTEGVQPKT*CSEKNQ
Trigger: CTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTAC...TCCCTCTGTGAATGTACAGGCGGAACTGTACGAACAGCTCCCTTCCATCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCTGCCAAGGGACATCTaGTCAAGGCCCTTTCATTTG +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPLPRDI*SRPFHL
Trigger: CAAATGAAAGGGCCTTGACAAGATGTCCCTTGGCAG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTTGGCCATTCCAAGGTaGGTTTTCCCAACAACCAGG +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYLAIPR*VFPTTR
Trigger: CCTGGTTGTTGGGAAAACCAACCTTGGAATGGCCAA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS TCA 90 bp TATGTTGCCTCGCTTGTGCAGACACCTGAATGGCAATGGTGTTCATaGTCAAGGGCACAAACTCAGCAACAACATTGTGGATGTTCAGTT +
Preference number: 5 (lower is better)
Translates to: YVASLVQTPEWQWCS*SRAQTQQQHCGCSV
Trigger: AACTGAACATCCACAATGTTGTTGCTGAGTTTGTGCCCTTGATCATGAACACCATTGCCATTCAGGTGTCTGCACAAGCGAGGCAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp TCTCGGAGAGTGTCCAGAAACTTGTCGTGCCTGTTGGTTAGCATGTaGAGCTGGTTTCCAATGTCCTTTTCTGAAAGTTCTTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: SRRVSRNLSCLLVSM*SWFPMSFSESSLVL
Trigger: CAAAACCAAAGAACTTTCAGAAAAGGACATTGGAAACCAGCTGCACATGCTAACCAACAGGCACGACAAGTTTCTGGACACTCTCCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp GTGAAGAGCACTGAAGCCCTATGTTGTTGCTACCCTTTTCTTACTTaGAGCCTACATAAAATTTACCGAGATGGCAGTATTAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: VKSTEALCCCYPFLT*SLHKIYRDGSIRRL
Trigger: CAGCCGCCTAATACTGCCATCTCGGTAAATTTTATGTAGGCTGCAAGTAAGAAAAGGGTAGCAACAACATAGGGCTTCAGTGCTCTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGTTCTCGGGGATCACTaGAGGGTTCTCAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTVLGDH*RVLKVA
Trigger: CGCTACTTTGAGAACCCTCAAGTGATCCCCGAGAAC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCCTCACGCTCCGGGTaGACTTTCACAGCAATCGTT +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSSRSG*TFTAIV
Trigger: AACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCCACACACCAAGGTTTaGACCAAACTTCGACAGTCT +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWPHTKV*TKLRQS
Trigger: AGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTGG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCCCACGTGATTGTCTaGACACCACACACCAAGGTT +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTPHVIV*TPHTKV
Trigger: AACCTTGGTGTGTGGTGTCAAGACAATCACGTGGGG...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCCCACGTGATTGTCTaGACACCACACACCAAGGTT +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPHVIV*TPHTKV
Trigger: AACCTTGGTGTGTGGTGTCAAGACAATCACGTGGGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGCTGGAGAGAAGCTTaGCAGTCGGAAAACTCCACA +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSSWREA*QSENST
Trigger: TGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGCT...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGCCACCTCCCCGATTTaGCAAAGCTCCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSATSPI*QSSFSS
Trigger: TGAAGAAAAGGAGCTTTGCAAAATCGGGGAGGTGGC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGTGGAATTCAGGGCTTaGAAGAGTGCAGCGATGATT +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIVEFRA*KSAAMI
Trigger: AATCATCGCTGCACTCTTCAAAGCCCTGAATTCCAC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTGTCGAGTCAGGAACTaGATCAGGGGCTCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTCRVRN*IRGSRN
Trigger: ATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGACA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGTCGAGTCAGGAACTaGATCAGGGGCTCTCGGAAT +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFCRVRN*IRGSRN
Trigger: ATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGACA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTTATCTCCTTCTGGATaGGGAGGTCCCAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLSPSG*GGPKSC
Trigger: GCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCGGGGTCCAGGACCTaGGTAATAAACACACTGGTG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSGSRT*VINTLV
Trigger: CACCAGTGTGTTTATTACCAAGGTCCTGGACCCCGA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTTGCGGTTCTTGTTGTaGTCATGGATGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFLRFLL*SWMWWG
Trigger: CCCCCACCACATCCATGACAACAACAAGAACCGCAA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACTGTTGCGGTTCTTGTaGTTGTCATGGATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQLLRFL*LSWMWW
Trigger: CCACCACATCCATGACAACAACAAGAACCGCAACAG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTTGCTGTTGCGGTTCTaGTTGTTGTCATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWLLLRF*LLSWMW
Trigger: CCACATCCATGACAACAACAAGAACCGCAACAGCAA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTTGCTGTTGCGGTTCTaGTTGTTGTCATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSLLLRF*LLSWMW
Trigger: CCACATCCATGACAACAACAAGAACCGCAACAGCAA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTTGTGTATGGCGAATTaGGCGATAATGTGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYLCMAN*AIMCAR
Trigger: CCTGGCGCACATTATCGCCAAATTCGCCATACACAA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATTGTGTATGGCGAATTaGGCGATAATGTGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSLCMAN*AIMCAR
Trigger: CCTGGCGCACATTATCGCCAAATTCGCCATACACAA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCACAGTCATCAGCAGCTaGTCGAACCACTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFTVISS*SNHCSL
Trigger: CAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTACGGCTCGCAACACCTaGGTGTTTCCACATGTCATG +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTTARNT*VFPHVM
Trigger: CATGACATGTGGAAACACCAAGGTGTTGCGAGCCGT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAAGTACTCGGCTCTGTaGGGAAAATGCTCATCAGGC +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLKYSAL*GKCSSG
Trigger: GCCTGATGAGCATTTTCCCAACAGAGCCGAGTACTT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGTCCAGCTCTTCATATTaGGAGGCCACACTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSSSSY*EATLEV
Trigger: TACTTCCAGTGTGGCCTCCAAATATGAAGAGCTGGA...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAACAGCCCGGAGGATTTaGGCATCTGGTGATTTTTCG +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLTARRI*ASGDFS
Trigger: CGAAAAATCACCAGATGCCAAAATCCTCCGGGCTGT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGCGACGTTTCATGGAGTaGTCAAAAACCTCGAAAAAC +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGRRFME*SKTSKN
Trigger: GTTTTTCGAGGTTTTTGACAACTCCATGAAACGTCG...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTAGCTCAATGCACTGCTaGATCCAGAAGTGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSSMHC*IQKWFP
Trigger: GGGGAACCACTTCTGGATCAAGCAGTGCATTGAGCT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCTTTTCATAGGATTCTaGTGCCTGCTCAAAGAACCC +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGLFIGF*CLLKEP
Trigger: GGGTTCTTTGAGCAGGCACAAGAATCCTATGAAAAG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCCTTTTCATAGGATTCTaGTGCCTGCTCAAAGAACCC +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGLFIGF*CLLKEP
Trigger: GGGTTCTTTGAGCAGGCACAAGAATCCTATGAAAAG...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACACTGGTTCAATTCCTaGGAGCATCGAATCCAGTGG +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSHWFNS*EHRIQW
Trigger: CCACTGGATTCGATGCTCCAAGGAATTGAACCAGTG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTACATTGACCAGTCCTaGTTTCCGGGCGATTTTTCC +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSYIDQS*FPGDFS
Trigger: GGAAAAATCGCCCGGAAACAAGGACTGGTCAATGTA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGGAGGTAGCATTTAACTaGCTGTCGAATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGEVAFN*LSNLLE
Trigger: TTCCAGAAGATTCGACAGCAAGTTAAATGCTACCTC...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTAAAAGCCACAGCACCTaGGCTAAGTATTTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGKSHST*AKYFLD
Trigger: ATCGAGGAAATACTTAGCCAAGGTGCTGTGGCTTTT...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAAAAGCCACAGCACCTaGGCTAAGTATTTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKKSHST*AKYFLD
Trigger: ATCGAGGAAATACTTAGCCAAGGTGCTGTGGCTTTT...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAGGGAGTTGCTTGGTCTaGGCCTCCAAGATTTTGATC +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQGSCLV*ASKILI
Trigger: GATCAAAATCTTGGAGGCCAAGACCAAGCAACTCCC...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAAATTTGGGGAGTTGCTaGGTCTTGGCCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLNLGSC*VLASKI
Trigger: AATCTTGGAGGCCAAGACCAAGCAACTCCCCAAATT...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAATTTGGGGAGTTGCTaGGTCTTGGCCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPNLGSC*VLASKI
Trigger: AATCTTGGAGGCCAAGACCAAGCAACTCCCCAAATT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAAATAATGCGTTGGCTTaGGCATCAGAAACTCCCCAG +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTINNALA*ASETPQ
Trigger: CTGGGGAGTTTCTGATGCCAAAGCCAACGCATTATT...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTCGACAGTCTGTGACTaGGAATGTCTGCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYSTVCD*ECLLVF
Trigger: GAAGACAAGCAGACATTCCAAGTCACAGACTGTCGA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCCACACACCAAGGTTTaGACCAAACTTCGACAGTCT +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYPHTKV*TKLRQS
Trigger: AGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTGG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTCATATGTGTGTGGATTaGATCGACTTCTATGGTAGC +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGHMCVD*IDFYGS
Trigger: GCTACCATAGAAGTCGATCAAATCCACACACATATG...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCCCGAAGTTGGGGTCGTaGAAGTCTACAAAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFPKLGS*KSTKRK
Trigger: CTTTCGCTTTGTAGACTTCAACGACCCCAACTTCGG...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGAATTCATCTCCGAAGTaGGGGTCGTTGAAGTCTACA +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWNSSPK*GSLKST
Trigger: TGTAGACTTCAACGACCCCAACTTCGGAGATGAATT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGCAGGACGATCTTCTaGTGTATGGCGAATTTGGCG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFCRTIF*CMANLA
Trigger: CGCCAAATTCGCCATACACAAGAAGATCGTCCTGCA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACATAGTTCACTTGGTTaGGCTGCTCCACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQHSSLG*AAPQSS
Trigger: TGATGACTGTGGAGCAGCCAAACCAAGTGAACTATG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACATAGTTCACTTGGTTaGGCTGCTCCACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSHSSLG*AAPQSS
Trigger: TGATGACTGTGGAGCAGCCAAACCAAGTGAACTATG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAATTCCCATAGTTCACTaGGTTTGGCTGCTCCACAGT +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLIPIVH*VWLLHS
Trigger: ACTGTGGAGCAGCCAAACCAAGTGAACTATGGGAAT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTTTCTGAAAGTTCTTaGGTTTTGGGCGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIFSESS*VLGVLV
Trigger: GACCAGCACGCCCAAAACCAAAGAACTTTCAGAAAA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGAGTGTCCAGAAACTaGTCGTGCCTGTTGGTTAGC +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFRVSRN*SCLLVS
Trigger: GCTAACCAACAGGCACGACAAGTTTCTGGACACTCT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp GCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGATAAAACTCCGTTGTTaGCTTCGGCTTAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: AGCVQPKTLCSEKNQHDGIKLRC*LRLNLK
Trigger: CTTCAGATTAAGCCGAAGCAAACAACGGAGTTTTAT...CCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGCTTTTCATAGGATTCTaGTGCCTGCTCAAAGAACCC +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPLFIGF*CLLKEP
Trigger: GGGTTCTTTGAGCAGGCACAAGAATCCTATGAAAAG...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTGGGAGTTGCTTGGTCTaGGCCTCCAAGATTTTGATC +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTGSCLV*ASKILI
Trigger: GATCAAAATCTTGGAGGCCAAGACCAAGCAACTCCC...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAATTTGGGGAGTTGCTaGGTCTTGGCCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLNLGSC*VLASKI
Trigger: AATCTTGGAGGCCAAGACCAAGCAACTCCCCAAATT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGAAGAATTTGGGGAGTaGCTTGGTCTTGGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFEEFGE*LGLGLQ
Trigger: TTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATCTATGAGGAAGAATTaGGGGAGTTGCTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLSMRKN*GSCLVL
Trigger: CAAGACCAAGCAACTCCCCAAATTCTTCCTCATAGA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATAAAAACAAGTGCCTCTaGGTGGTCTCCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYKNKCL*VVSFLF
Trigger: GAAGAGAAAGGAGACCACCAAGAGGCACTTGTTTTT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAGAAACTCAGAAATGTaGGGCGTGAGTCGAAATGGG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQRNSEM*GVSRNG
Trigger: CCCATTTCGACTCACGCCCAACATTTCTGAGTTTCT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAGAAACTCAGAAATGTaGGGCGTGAGTCGAAATGGG +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLRNSEM*GVSRNG
Trigger: CCCATTTCGACTCACGCCCAACATTTCTGAGTTTCT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAGAAACTCAGAAATGTaGGGCGTGAGTCGAAATGGG +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYRNSEM*GVSRNG
Trigger: CCCATTTCGACTCACGCCCAACATTTCTGAGTTTCT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACGAGATTCCCAAGGCTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAGTACAGCCTAAAACTTaGTGCTCAGAGAAAAACCAG +
Preference number: 5 (lower is better)
Translates to: NEIPKAGCVQPKTLCSEKVQPKT*CSEKNQ
Trigger: CTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTAC...TTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAGCCTTGGGAATCTCGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATATCGACTTTTCACTGTaGTGTGTCGGGTACCTAGGA +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYIDFSL*CVGYLG
Trigger: TCCTAGGTACCCGACACACAACAGTGAAAAGTCGAT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS CCA 90 bp GTGGCTTCTGTTGCTGACTTTTGGTCTCATTCCTCCATACTCAGTTaGACAAACCTCTCTGTATCTTCCATTTTGGTAGAGACCTTAACA +
Preference number: 5 (lower is better)
Translates to: VASVADFWSHSSILS*TNLSVSSILVETLT
Trigger: TGTTAAGGTCTCTACCAAAATGGAAGATACAGAGAGGTTTGTCCAACTGAGTATGGAGGAATGAGACCAAAAGTCAGCAACAGAAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCGGTGGCCTGAACTGTTaGTGTAGCTCAATAATTATT +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGGGLNC*CSSIII
Trigger: AATAATTATTGAGCTACACAAACAGTTCAGGCCACC...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCAAAATGATGAATTTCTaGTGTGATCGGTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGKMMNF*CDRWPE
Trigger: TTCAGGCCACCGATCACACAAGAAATTCATCATTTT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAGCGGTTCACTACTTTaGGAAGCTCCTTGTAAATCT +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPSGSLL*EAPCKS
Trigger: AGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGCT...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTCTCTGCTGGACAATTaGAAAGTAACTGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYSLLDN*KVTGAF
Trigger: GAATGCTCCAGTTACTTTCAAATTGTCCAGCAGAGA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATCTCTGCTGGACAATTaGAAAGTAACTGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLSLLDN*KVTGAF
Trigger: GAATGCTCCAGTTACTTTCAAATTGTCCAGCAGAGA...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTGGCTGTGTACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTGTGAGATGATAACATaGGGGATGGTCTTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: LAVYSLKLCAQRKTSMMGCEMIT*GMVFSV
Trigger: TACAGAAAAGACCATCCCCAATGTTATCATCTCACA...ACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTACACAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTGTGAGATGATAACATaGGGGATGGTCTTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGCEMIT*GMVFSV
Trigger: TACAGAAAAGACCATCCCCAATGTTATCATCTCACA...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCTTGGAGCTCACTATaGGTGGAATTCAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSWSSL*VEFRAL
Trigger: CAAAGCCCTGAATTCCACCAATAGTGAGCTCCAAGA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCATATGTGTGTGGATTaGATCGACTTCTATGGTAGC +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYHMCVD*IDFYGS
Trigger: GCTACCATAGAAGTCGATCAAATCCACACACATATG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAATAATGCTTATGATCTaGATGGCCTGGAACTGGAGG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQIMLMI*MAWNWR
Trigger: CCTCCAGTTCCAGGCCATCAAGATCATAAGCATTAT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATATAATGCTTATGATCTaGATGGCCTGGAACTGGAGG +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYIMLMI*MAWNWR
Trigger: CCTCCAGTTCCAGGCCATCAAGATCATAAGCATTAT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAATTCATCTCCGAAGTaGGGGTCGTTGAAGTCTACA +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQNSSPK*GSLKST
Trigger: TGTAGACTTCAACGACCCCAACTTCGGAGATGAATT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAAATTCATCTCCGAAGTaGGGGTCGTTGAAGTCTACA +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLNSSPK*GSLKST
Trigger: TGTAGACTTCAACGACCCCAACTTCGGAGATGAATT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAGTACACCTTGAAGTGTaGCACTATCAGGTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLVHLEV*HYQVQN
Trigger: ATTCTGCACCTGATAGTGCAACACTTCAAGGTGTAC...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGTACACCTTGAAGTGTaGCACTATCAGGTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSVHLEV*HYQVQN
Trigger: ATTCTGCACCTGATAGTGCAACACTTCAAGGTGTAC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTATTCCCATAGTTCACTaGGTTTGGCTGCTCCACAGT +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTIPIVH*VWLLHS
Trigger: ACTGTGGAGCAGCCAAACCAAGTGAACTATGGGAAT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCCAGCTCTTCATATTaGGAGGCCACACTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSSSSY*EATLEV
Trigger: TACTTCCAGTGTGGCCTCCAAATATGAAGAGCTGGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTATTGGGGAGTTATTCTaGACCCATTCTTCCACGATT +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSIGELF*THSSTI
Trigger: AATCGTGGAAGAATGGGTCAAGAATAACTCCCCAAT...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGATTGGGGAGTTATTCTaGACCCATTCTTCCACGATT +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWIGELF*THSSTI
Trigger: AATCGTGGAAGAATGGGTCAAGAATAACTCCCCAAT...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATATTGGGGAGTTATTCTaGACCCATTCTTCCACGATT +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYIGELF*THSSTI
Trigger: AATCGTGGAAGAATGGGTCAAGAATAACTCCCCAAT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTCGACGTTTCATGGAGTaGTCAAAAACCTCGAAAAAC +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSRRFME*SKTSKN
Trigger: GTTTTTCGAGGTTTTTGACAACTCCATGAAACGTCG...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGCGACGTTTCATGGAGTaGTCAAAAACCTCGAAAAAC +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWRRFME*SKTSKN
Trigger: GTTTTTCGAGGTTTTTGACAACTCCATGAAACGTCG...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTTTTCTGAAAGTTCTTaGGTTTTGGGCGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYFSESS*VLGVLV
Trigger: GACCAGCACGCCCAAAACCAAAGAACTTTCAGAAAA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCATAAAACTCCGTTGTTaGCTTCGGCTTAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: FLHANYQENNRNPVKLWGIKLRC*LRLNLK
Trigger: CTTCAGATTAAGCCGAAGCAAACAACGGAGTTTTAT...GCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCATTTGACCCTGTGGTGGGATTTGGGTAAACTCAGCTGTAATCATCATTCCCTTTTCATAGGATTCTaGTGCCTGCTCAAAGAACCC +
Preference number: 5 (lower is better)
Translates to: FHLTLWWDLGKLSCNHHSLFIGF*CLLKEP
Trigger: GGGTTCTTTGAGCAGGCACAAGAATCCTATGAAAAG...GGAATGATGATTACAGCTGAGTTTACCCAAATCCCACCACAGGGTCAAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTACATTGACCAGTCCTaGTTTCCGGGCGATTTTTCC +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFYIDQS*FPGDFS
Trigger: GGAAAAATCGCCCGGAAACAAGGACTGGTCAATGTA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATAGAGGTAGCATTTAACTaGCTGTCGAATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTIEVAFN*LSNLLE
Trigger: TTCCAGAAGATTCGACAGCAAGTTAAATGCTACCTC...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAAAAGCCACAGCACCTaGGCTAAGTATTTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQKSHST*AKYFLD
Trigger: ATCGAGGAAATACTTAGCCAAGGTGCTGTGGCTTTT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAATCTATGAGGAAGAATTaGGGGAGTTGCTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQSMRKN*GSCLVL
Trigger: CAAGACCAAGCAACTCCCCAAATTCTTCCTCATAGA...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ATTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATGTAACATCTCGGGGTaGAGTCTATTTAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: ISNRFAQHRHSSASSKTICNISG*SLFKCR
Trigger: CCTGCATTTAAATAGACTCAACCCCGAGATGTTACA...TATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCAGAAACTCAGAAATGTaGGGCGTGAGTCGAAATGGG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFRNSEM*GVSRNG
Trigger: CCCATTTCGACTCACGCCCAACATTTCTGAGTTTCT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGTACAGCCTAAAACTTaGTGCTCAGAGAAAAACCAG +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPVQPKT*CSEKNQ
Trigger: CTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTAC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CAGATGTTGCATCATCTGATCACAAAATTTATCATTGAAGGAATTTaGGAAGAGCCTCGTGACCGAAGTCAGGCGATTCACAACATTCAG +
Preference number: 5 (lower is better)
Translates to: QMLHHLITKFIIEGI*EEPRDRSQAIHNIQ
Trigger: CTGAATGTTGTGAATCGCCTGACTTCGGTCACGAGGCTCTTCCCAAATTCCTTCAATGATAAATTTTGTGATCAGATGATGCAACATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGGGTGGCCTGAACTGTTaGTGTAGCTCAATAATTATT +
Preference number: 5 (lower is better)
Translates to: LVTKVCTKARSCCEVLFPGGLNC*CSSIII
Trigger: AATAATTATTGAGCTACACAAACAGTTCAGGCCACC...CGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTAGGTGGCCTGAACTGTTaGTGTAGCTCAATAATTATT +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLGGLNC*CSSIII
Trigger: AATAATTATTGAGCTACACAAACAGTTCAGGCCACC...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGTGAGGCTTCAGCATTaGTTCATTTTCAGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSVRLQH*FIFSCK
Trigger: TTTGCAGCTGAAAATGAACAAATGCTGAAGCCTCAC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGTGTGAGATGATAACATaGGGGATGGTCTTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: PFLHANYQENNRNPVKLWCEMIT*GMVFSV
Trigger: TACAGAAAAGACCATCCCCAATGTTATCATCTCACA...CCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCATAATGCTTATGATCTaGATGGCCTGGAACTGGAGG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFIMLMI*MAWNWR
Trigger: CCTCCAGTTCCAGGCCATCAAGATCATAAGCATTAT...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAACGACGTTTCATGGAGTaGTCAAAAACCTCGAAAAAC +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQRRFME*SKTSKN
Trigger: GTTTTTCGAGGTTTTTGACAACTCCATGAAACGTCG...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATATAAAACTCCGTTGTTaGCTTCGGCTTAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYIKLRC*LRLNLK
Trigger: CTTCAGATTAAGCCGAAGCAAACAACGGAGTTTTAT...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGAGGTAGCATTTAACTaGCTGTCGAATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYEVAFN*LSNLLE
Trigger: TTCCAGAAGATTCGACAGCAAGTTAAATGCTACCTC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTCTATGAGGAAGAATTaGGGGAGTTGCTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSMRKN*GSCLVL
Trigger: CAAGACCAAGCAACTCCCCAAATTCTTCCTCATAGA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCTATGAGGAAGAATTaGGGGAGTTGCTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFSMRKN*GSCLVL
Trigger: CAAGACCAAGCAACTCCCCAAATTCTTCCTCATAGA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATGTACAGCCTAAAACTTaGTGCTCAGAGAAAAACCAG +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYVQPKT*CSEKNQ
Trigger: CTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTAC...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 90 bp CGAATCTTCTGGAAGCAATCCACGATAGGAACAGTTGGAATAGTATaGATCCGACTTAATATATCCAGAGCTACATTGACCAGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: RIFWKQSTIGTVGIV*IRLNISRATLTSPC
Trigger: ACAAGGACTGGTCAATGTAGCTCTGGATATATTAAGTCGGATTCATACTATTCCAACTGTTCCTATCGTGGATTGCTTCCAGAAGATTCG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CAAAGCGAAAGAACAGGGCACGTTTCTGAGCGATGCTGTAATTTTTaGGAATCTCTTCCTCCATATACTCTTTTAAGAATGTCATGTTGC +
Preference number: 5 (lower is better)
Translates to: QSERTGHVSERCCNF*ESLPPYTLLRMSCC
Trigger: GCAACATGACATTCTTAAAAGAGTATATGGAGGAAGAGATTCCCAAAAATTACAGCATCGCTCAGAAACGTGCCCTGTTCTTTCGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 90 bp CATCTCCATTTCATTCTAACTGCCAAGGTGCATCTGATGATGCTTTaGTTCATCTCATGGGTGCGTAATAGATGCATAATAAATGACAGC +
Preference number: 5 (lower is better)
Translates to: HLHFILTAKVHLMML*FISWVRNRCIINDS
Trigger: GCTGTCATTTATTATGCATCTATTACGCACCCATGAGATGAACCAAAGCATCATCAGATGCACCTTGGCAGTTAGAATGAAATGGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATTCTTTTGGGCTGGTTaGCTTCTCAAGAGAAAAGTA +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSFFWAG*LLKRKV
Trigger: TACTTTTCTCTTGAGAAGCAAACCAGCCCAAAAGAA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTCCCTTTCTTACACGCAAACTACCAGGAAAATAACCGCAACCCAGTGAAACTACAGACAAAACATTTTTaGTGTGAGGACGAAGATGTT +
Preference number: 5 (lower is better)
Translates to: LPFLHANYQENNRNPVKLQTKHF*CEDEDV
Trigger: AACATCTTCGTCCTCACACAAAAAATGTTTTGTCTG...TAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTTTGCGTGTAAGAAAGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATCAGACAAAACATTTTTaGTGTGAGGACGAAGATGTT +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYQTKHF*CEDEDV
Trigger: AACATCTTCGTCCTCACACAAAAAATGTTTTGTCTG...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATAAAATGATGAATTTCTaGTGTGATCGGTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYKMMNF*CDRWPE
Trigger: TTCAGGCCACCGATCACACAAGAAATTCATCATTTT...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAAAAAATGATGAATTTCTaGTGTGATCGGTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: LCAQRKTSMMGSSTPVSQKMMNF*CDRWPE
Trigger: TTCAGGCCACCGATCACACAAGAAATTCATCATTTT...TTGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTAGCGGTTCACTACTTTaGGAAGCTCCTTGTAAATCT +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTSGSLL*EAPCKS
Trigger: AGATTTACAAGGAGCTTCCAAAAGTAGTGAACCGCT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCAGTTTGGAAGATTTCTTaGAACGTTAAGGGGTTCATC +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSVWKIS*NVKGFI
Trigger: GATGAACCCCTTAACGTTCAAAGAAATCTTCCAAAC...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TGTACACTTGTTACAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTAATAAGGGACCGTAGTTaGGAAGATTTCTTTGAACGT +
Preference number: 5 (lower is better)
Translates to: CTLVTKVCTKARSCCEVLIRDRS*EDFFER
Trigger: ACGTTCAAAGAAATCTTCCAAACTACGGTCCCTTAT...TAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTGTAACAAGTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCGTGAGGCTTCAGCATTaGTTCATTTTCAGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFVRLQH*FIFSCK
Trigger: TTTGCAGCTGAAAATGAACAAATGCTGAAGCCTCAC...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTGTGAGATGATAACATaGGGGATGGTCTTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYCEMIT*GMVFSV
Trigger: TACAGAAAAGACCATCCCCAATGTTATCATCTCACA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TTTCCAACCGCTTCGCCCAGCATCGTCATAGTTCAGCTTCCTCTAAAACTATATTTTAAGAATGTCATGTaGCAGAGAAAACGACCAGTA +
Preference number: 5 (lower is better)
Translates to: FPTASPSIVIVQLPLKLYFKNVM*QRKRPV
Trigger: TACTGGTCGTTTTCTCTGCAACATGACATTCTTAAA...ATATAGTTTTAGAGGAAGCTGAACTATGACGATGCTGGGCGAAGCGGTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp CAAAGGTCTGTACAAAAGCACGAAGCTGCTGTGAGGTGTTATTTCCGAAAGAGTTTTAAGAATGTCATGTaGCAGAGAAAACGACCAGTA +
Preference number: 5 (lower is better)
Translates to: QRSVQKHEAAVRCYFRKSFKNVM*QRKRPV
Trigger: TACTGGTCGTTTTCTCTGCAACATGACATTCTTAAA...ACTCTTTCGGAAATAACACCTCACAGCAGCTTCGTGCTTTTGTACAGACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTGTAACATCTCGGGGTaGAGTCTATTTAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTCNISG*SLFKCR
Trigger: CCTGCATTTAAATAGACTCAACCCCGAGATGTTACA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTGTAACATCTCGGGGTaGAGTCTATTTAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFCNISG*SLFKCR
Trigger: CCTGCATTTAAATAGACTCAACCCCGAGATGTTACA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCATGCTTGAAATGGTGTTaGGAGAAAAAGGGCATATTG +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSCLKWC*EKKGIL
Trigger: CAATATGCCCTTTTTCTCCAAACACCATTTCAAGCA...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp TGCTACGATAGCTTCTTAAAGGATGTCTTTTTCTTTGCACAAATACTGGAAATGCAGCTGCTGCTTTGCTaGGGAATCGACTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: CYDSFLKDVFFFAQILEMQLLLC*GIDFSL
Trigger: CAGTGAAAAGTCGATTCCCAAGCAAAGCAGCAGCTG...CATTTCCAGTATTTGTGCAAAGAAAAAGACATCCTTTAAGAAGCTATCGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360902.2
CDS-3UTR CAA 90 bp ACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTCACAGACAAAACATTTTTaGTGTGAGGACGAAGATGTT +
Preference number: 5 (lower is better)
Translates to: TLCSEKNQHDGFINSCFSQTKHF*CEDEDV
Trigger: AACATCTTCGTCCTCACACAAAAAATGTTTTGTCTG...TGAGAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATCAGACAAAACATTTTTaGTGTGAGGACGAAGATGTT +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYQTKHF*CEDEDV
Trigger: AACATCTTCGTCCTCACACAAAAAATGTTTTGTCTG...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTGTGAGATGATAACATaGGGGATGGTCTTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTCEMIT*GMVFSV
Trigger: TACAGAAAAGACCATCCCCAATGTTATCATCTCACA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AACTACCAGGAAAATAACCGCAACCCAGTGAAACTATGGGGCTTCTGTGAATATTTTAAGAATGTCATGTaGCAGAGAAAACGACCAGTA +
Preference number: 5 (lower is better)
Translates to: NYQENNRNPVKLWGFCEYFKNVM*QRKRPV
Trigger: TACTGGTCGTTTTCTCTGCAACATGACATTCTTAAA...ATATTCACAGAAGCCCCATAGTTTCACTGGGTTGCGGTTATTTTCCTGGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTATAAAACTCCGTTGTTaGCTTCGGCTTAATCTGAAG +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTIKLRC*LRLNLK
Trigger: CTTCAGATTAAGCCGAAGCAAACAACGGAGTTTTAT...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTTTAAGAATGTCATGTaGCAGAGAAAACGACCAGTA +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTFKNVM*QRKRPV
Trigger: TACTGGTCGTTTTCTCTGCAACATGACATTCTTAAA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp TACAGCCTAAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTTTGGCCTCCAAGATTTaGATCCACTTTTTCAACTTA +
Preference number: 5 (lower is better)
Translates to: YSLKLCAQRKTSMMGSSTLASKI*IHFFNL
Trigger: TAAGTTGAAAAAGTGGATCAAAATCTTGGAGGCCAA...AGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTTAGGCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS-3UTR CAA 90 bp AAAACTTTGTGCTCAGAGAAAAACCAGCATGATGGGTTCATCAACTCCTGTTTCTTGGCCTCCAAGATTTaGATCCACTTTTTCAACTTA +
Preference number: 5 (lower is better)
Translates to: KTLCSEKNQHDGFINSCFLASKI*IHFFNL
Trigger: TAAGTTGAAAAAGTGGATCAAAATCTTGGAGGCCAA...GAAACAGGAGTTGATGAACCCATCATGCTGGTTTTTCTCTGAGCACAAAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 90 bp CAGGCTTTTGTGTTAATTAGAAACACATCTTGGTCAGTAAAGCTGTaGTCCCTTCTGACTGTAGATTGTGTTGAAATTATTAATCAGGAG +
Preference number: 5 (lower is better)
Translates to: QAFVLIRNTSWSVKL*SLLTVDCVEIINQE
Trigger: CTCCTGATTAATAATTTCAACACAATCTACAGTCAGAAGGGAGCACAGCTTTACTGACCAAGATGTGTTTCTAATTAACACAAAAGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS TCA 90 bp GGACCTGATAAATATCTAAAGCTTGCATTGCATATTTCACAAGTTTaGTGTAAATCTGTGTCTCTTTGGGTTGTAACTGCTTGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: GPDKYLKLALHISQV*CKSVSLWVVTACWE
Trigger: TTCCCAACAAGCAGTTACAACCCAAAGAGACACAGATTTACATCAAACTTGTGAAATATGCAATGCAAGCTTTAGATATTTATCAGGTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CAGAGCCCGGAGCGCCCTTCACATTCCGGGTGGCCGTaGCGGCCACAGTCACAGCCAGGGGTGCCAGGCGGG +
Preference number: 6 (lower is better)
Translates to: QSPERPSHSGWP*RPQSQPGVPGG
Trigger: CCCGCCTGGCACCCCTGGCTGTGACTGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CGGGCTCAGAGCCCGGAGCGCCCTTCACATTCCGGGTaGCCGTGGCGGCCACAGTCACAGCCAGGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: RAQSPERPSHSG*PWRPQSQPGVP
Trigger: TGGCACCCCTGGCTGTGACTGTGGCCGCCACGGCCACCCGGAATGTGAAGGGCGCTCCGGGCTCTGAGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp AGCTGGACGGCGAGGGAGAGGTCGCTGAGGGGCAGGTaGTGGCGGACATGGTGCACGAGGTCGGCCAGCGTG +
Preference number: 6 (lower is better)
Translates to: SWTARERSLRGR*WRTWCTRSASV
Trigger: CACGCTGGCCGACCTCGTGCACCATGTCCGCCAGCACCTGCCCCTCAGCGACCTCTCCCTCGCCGTCCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TGGCCTGGAACTGGAGGTCCAGGCGCATGGTGCTGGTaGTGGGCGAACCGGGGCGCACAGCCGTCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: WPGTGGPGAWCW*WANRGAQPSGH
Trigger: GTGCCCAGACGGCTGTGCGCCCCGGTTCGCCCAGCACCAGCACCATGCGCCTGGACCTCCAGTTCCAGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp TGGACGGCGAGGGAGAGGTCGCTGAGGGGCAGGTGCTaGCGGACATGGTGCACGAGGTCGGCCAGCGTGCTG +
Preference number: 6 (lower is better)
Translates to: WTARERSLRGRC*RTWCTRSASVL
Trigger: CAGCACGCTGGCCGACCTCGTGCACCATGTCCGCCAGCACCTGCCCCTCAGCGACCTCTCCCTCGCCGTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GCCTGTAGGAGAGGCGTGTGCACGTGGGACACTACGTaGGGCAGCCGCCGCCACTCGCGGATGGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ACRRGVCTWDTT*GSRRHSRMARL
Trigger: CAGCCTGGCCATCCGCGAGTGGCGGCGGCTGCCCCACGTAGTGTCCCACGTGCACACGCCTCTCCTACAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GCCACAGTCACAGCCAGGGGTGCCAGGCGGGGTCCATaGGGCACAGATTGTCCAGGCTGTTTGCCGCGGCCA +
Preference number: 6 (lower is better)
Translates to: ATVTARGARRGP*GTDCPGCLPRP
Trigger: TGGCCGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGACCCCGCCTGGCACCCCTGGCTGTGACTGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CACCACTGGACTGAAGGTGGCAGGCAGGGTAGGGTTTaGCACCCCCACTCCTCGCTCCCGGTCCCCGCTGCT +
Preference number: 6 (lower is better)
Translates to: HHWTEGGRQGRV*HPHSSLPVPAA
Trigger: AGCAGCGGGGACCGGGAGCGAGGAGTGGGGGTGGCAAACCCTACCCTGCCTGCCACCTTCAGTCCAGTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417523.5
CDS CCA 72 bp TCCAGTGGGTCAGCATCTGGTGCCCGTCCTCCATCCTaGCCGGCACCGCCGGGGTCAGAATGGCCATCGCCT +
Preference number: 6 (lower is better)
Translates to: SSGSASGARPPS*PAPPGSEWPSP
Trigger: AGGCGATGGCCATTCTGACCCCGGCGGTGCCGGCCAGGATGGAGGACGGGCACCAGATGCTGACCCACTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp ATTTGCTGGGCTGCCTGTAGGAGAGGCGTGTGCACGTaGGACACTACGTGGGGCAGCCGCCGCCACTCGCGG +
Preference number: 6 (lower is better)
Translates to: ICWAACRRGVCT*DTTWGSRRHSR
Trigger: CCGCGAGTGGCGGCGGCTGCCCCACGTAGTGTCCCACGTGCACACGCCTCTCCTACAGGCAGCCCAGCAAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp AGCCAGGGGTGCCAGGCGGGGTCCATGCGGCACAGATaGTCCAGGCTGTTTGCCGCGGCCACCAGGGTGTTC +
Preference number: 6 (lower is better)
Translates to: SQGCQAGSMRHR*SRLFAAATRVF
Trigger: GAACACCCTGGTGGCCGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGACCCCGCCTGGCACCCCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp TCTTGGCGAAGAGCTGGACGGCGAGGGAGAGGTCGCTaGGGGGCAGGTGCTGGCGGACATGGTGCACGAGGT +
Preference number: 6 (lower is better)
Translates to: SWRRAGRRGRGR*GAGAGGHGARG
Trigger: ACCTCGTGCACCATGTCCGCCAGCACCTGCCCCTCAGCGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GGTGCTGGCGGACATGGTGCACGAGGTCGGCCAGCGTaGTGTAGGCGAGGGGCCTTAGAGTCTCTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GAGGHGARGRPA*CRRGALESLWQ
Trigger: CTGCCAGAGAGACTCTAAGGCCCCTCGCCTACAGCACGCTGGCCGACCTCGTGCACCATGTCCGCCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp ACAATGATCTTCCGGGTCCAGTGGGTCAGCATCTGGTaGCCGTCCTCCATCCTGGCCGGCACCGCCGGGGTC +
Preference number: 6 (lower is better)
Translates to: TMIFRVQWVSIW*PSSILAGTAGV
Trigger: GACCCCGGCGGTGCCGGCCAGGATGGAGGACGGGCACCAGATGCTGACCCACTGGACCCGGAAGATCATTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GGGCGACTGCCACCATCGTATAGTGGCGGATCAAGCTaGCGACAAAGGGCAGGGCGCTGGGCCGCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: GRLPPSYSGGSS*RQRAGRWAAGP
Trigger: AGGACCTGCGGCCCAGCGCCCTGCCCTTTGTCGCCAGCTTGATCCGCCACTATACGATGGTGGCAGTCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp AGTTTGGCTGGGCGAAGCACCGGGCGACCGCAATCATaGACGCTGTCAACGGGCCGGAGACCCCGATGGTGG +
Preference number: 6 (lower is better)
Translates to: SLAGRSTGRPQS*TLSTGRRPRWW
Trigger: CCACCATCGGGGTCTCCGGCCCGTTGACAGCGTCCATGATTGCGGTCGCCCGGTGCTTCGCCCAGCCAAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GGACCAGCTGCGGGACGGTGTGCCCCTCCTCCACAATaGTCTTCCGGGTCCAGTGGGTCAGCATCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: GPAAGRCAPPPQ*SSGSSGSASGA
Trigger: GGCACCAGATGCTGACCCACTGGACCCGGAAGATCATTGTGGAGGAGGGGCACACCGTCCCGCAGCTGGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GCGCGCTGGGCTGGCAGTCCCGCTGCACCTGGTGACTaGCGCTGCACAGAAATGGACTTATCTCACCCGCGA +
Preference number: 6 (lower is better)
Translates to: ARWAGSPAAPGD*RCTEMDLSHPR
Trigger: TCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGACTGCCAGCCCAGCGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS GCA 72 bp CTGGCCATCTCCACCAGGCGCTCGATGAAGCTGAGCTaGTGCTCCTCGGGGTGGCAGATGGCCAGGTATCCG +
Preference number: 6 (lower is better)
Translates to: LAISTRRSMKLS*CSSGWQMARYP
Trigger: CGGATACCTGGCCATCTGCCACCCCGAGGAGCAGCAGCTCAGCTTCATCGAGCGCCTGGTGGAGATGGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TCGATGATTTGCTGGGCTGCCTGTAGGAGAGGCGTGTaGACGTGGGACACTACGTGGGGCAGCCGCCGCCAC +
Preference number: 6 (lower is better)
Translates to: SMICWAACRRGV*TWDTTWGSRRH
Trigger: GTGGCGGCGGCTGCCCCACGTAGTGTCCCACGTGCACACGCCTCTCCTACAGGCAGCCCAGCAAATCATCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GGCGGGGTCCATGCGGCACAGATTGTCCAGGCTGTTTaGCGCGGCCACCAGGGTGTTCACCTTGCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: GGVHAAQIVQAV*RGHQGVHLAFP
Trigger: GGGGAAAGCAAGGTGAACACCCTGGTGGCCGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGACCCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GCTCTCTCCTCTGACCCTGTCGCGTACGTGGGTGCTTaGAGCTCCCCTGGCCGGGGCTTCGGAGTGACTTTC +
Preference number: 6 (lower is better)
Translates to: ALSSDPVAYVGA*SSPGRGFGVTF
Trigger: GAAAGTCACTCCGAAGCCCCGGCCAGGGGAGCTGCAAGCACCCACGTACGCGACAGGGTCAGAGGAGAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS CCA 72 bp GGCAGGGACTCATCGTCGATGTTCTTGGCGAAGAGCTaGACGGCGAGGGAGAGGTCGCTGAGGGGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: GRDSSSMFLAKS*TARERSLRGRC
Trigger: GCACCTGCCCCTCAGCGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGAACATCGACGATGAGTCCCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp ACTGGGACATGGCTTCCACAAAGCAGTTCAGCGCGCTaGGCTGGCAGTCCCGCTGCACCTGGTGACTGCCGC +
Preference number: 6 (lower is better)
Translates to: TGTWLPQSSSAR*AGSPAAPGDCR
Trigger: GCGGCAGTCACCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAACTGCTTTGTGGAAGCCATGTCCCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 72 bp AGGGTCGGATGGGGATTGGCGGCACGCACTGGGACATaGCTTCCACAAAGCAGTTCAGCGCGCTGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: RVGWGLAARTGT*LPQSSSARWAG
Trigger: GCCAGCCCAGCGCGCTGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CAA 72 bp TTGGACTCGCTGTTCTCCCGCTCCCGGGGCTCCTGCTaGACATGTGTGACCATGGCGAAGGCGGCACGGTCG +
Preference number: 6 (lower is better)
Translates to: LDSLFSRSRGSC*TCVTMAKAARS
Trigger: CGACCGTGCCGCCTTCGCCATGGTCACACATGTCAAGCAGGAGCCCCGGGAGCGGGAGAACAGCGAGTCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GCGGGTCATGATGGCGGTGACGGCTTTCTGAACCAGGGACACCAGTaGCTGGCTGTCCATGTTCTCTGGCTGCCCGGCGGCCGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: AGHDGGDGFLNQGHQ*LAVHVLWLPGGRER
Trigger: CCTCTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGCCAGCAACTGGTGTCCCTGGTTCAGAAAGCCGTCACCGCCATCATGACCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp CACAGTCACAGCCAGGGGTGCCAGGCGGGGTCCATGCGGCACAGATaGTCCAGGCTGTTTGCCGCGGCCACCAGGGTGTTCACCTTGCTT +
Preference number: 6 (lower is better)
Translates to: HSHSQGCQAGSMRHR*SRLFAAATRVFTLL
Trigger: AAGCAAGGTGAACACCCTGGTGGCCGCGGCAAACAGCCTGGACAATCTGTGCCGCATGGACCCCGCCTGGCACCCCTGGCTGTGACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp ACACCCGCCAGGCGCACTCCAGGACGAGGTAGGGGTTaGTGTGGCCTTTGGACTGACCGTACTCCGTCAGGG +
Preference number: 6 (lower is better)
Translates to: TPARRTPGRGRG*CGLWTDRTPSG
Trigger: CCCTGACGGAGTACGGTCAGTCCAAAGGCCACATCAACCCCTACCTCGTCCTGGAGTGCGCCTGGCGGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp ATGACGACTTCAGACAGGTCCACGGCCAGCCGCCTCTaGTCGATGGTGACACTGGGCGTGAAGCCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: MTTSDRSTASRL*SMVTLGVKPSL
Trigger: GAGGCTGGGCTTCACGCCCAGTGTCACCATCGAGCAGAGGCGGCTGGCCGTGGACCTGTCTGAAGTCGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TCTTTGGACTCGCTGTTCTCCCGCTCCCGGGGCTCCTaGTTGACATGTGTGACCATGGCGAAGGCGGCACGG +
Preference number: 6 (lower is better)
Translates to: SLDSLFSRSRGS*LTCVTMAKAAR
Trigger: CCGTGCCGCCTTCGCCATGGTCACACATGTCAAGCAGGAGCCCCGGGAGCGGGAGAACAGCGAGTCCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp AGGGACACCAGTTGCTGGCTGTCCATGTTCTCTGGCTaGCCGGCGGCCGAGAGAGGAGAGGACGTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: RDTSCWLSMFSG*PAAERGEDVSS
Trigger: AGAGGACACGTCCTCTCCTCTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGCCAGCAACTGGTGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CCAGGCTGTTTGCCGCGGCCACCAGGGTGTTCACCTTaGTTTCCCCGCCTTCGAACTGGGCGAGGTTGTGCA +
Preference number: 6 (lower is better)
Translates to: PGCLPRPPGCSP*FPRLRTGRGCA
Trigger: TGCACAACCTCGCCCAGTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGGTGGCCGCGGCAAACAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GTGTGCCCCTCCTCCACAATGATCTTCCGGGTCCAGTaGGTCAGCATCTGGTGCCCGTCCTCCATCCTGGCC +
Preference number: 6 (lower is better)
Translates to: VCPSSTMIFRVQ*VSIWCPSSILA
Trigger: GGCCAGGATGGAGGACGGGCACCAGATGCTGACCCACTGGACCCGGAAGATCATTGTGGAGGAGGGGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp AGGACGCAGGGTCGGATGGGGATTGGCGGCACGCACTaGGACATGGCTTCCACAAAGCAGTTCAGCGCGCTG +
Preference number: 6 (lower is better)
Translates to: RTQGRMGIGGTH*DMASTKQFSAL
Trigger: CAGCGCGCTGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 72 bp GCCGGGCCAGAGACTCAGAGGCTGCGCTGGAGAACATaGTCGAGACGTTGGACACATTCTCCAGGCCCACCC +
Preference number: 6 (lower is better)
Translates to: AGPETQRLRWRT*SRRWTHSPGPP
Trigger: GGGTGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTGGCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CCTGCGCCCGCCGGGCCAGAGACTCAGAGGCTGCGCTaGAGAACATGGTCGAGACGTTGGACACATTCTCCA +
Preference number: 6 (lower is better)
Translates to: PAPAGPETQRLR*RTWSRRWTHSP
Trigger: TGGAGAATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTGGCCCGGCGGGCGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp AACCAGGGACACCAGTTGCTGGCTGTCCATGTTCTCTaGCTGCCCGGCGGCCGAGAGAGGAGAGGACGTGTC +
Preference number: 6 (lower is better)
Translates to: NQGHQLLAVHVL*LPGGRERRGRV
Trigger: GACACGTCCTCTCCTCTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGCCAGCAACTGGTGTCCCTGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CCAGCCAGCCGCTGCCACTGCCCAGTGAGGGCTCTCTaGAGGACGAGGAGCTTCCTGCCCAGAGATACGAAA +
Preference number: 6 (lower is better)
Translates to: PASRCHCPVRAL*RTRSFLPRDTK
Trigger: TTTCGTATCTCTGGGCAGGAAGCTCCTCGTCCTCCAGAGAGCCCTCACTGGGCAGTGGCAGCGGCTGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS CAA 72 bp GCGGCACGGTCGTGGCTATCGGCCAGGTTGATGACGTaGGTGATGGACGGGAGCATGGCTCCTTGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: AARSWLSARLMT*VMDGSMAPWQL
Trigger: CAGCTGCCAAGGAGCCATGCTCCCGTCCATCACCAACGTCATCAACCTGGCCGATAGCCACGACCGTGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TCCAGGCTGTTTGCCGCGGCCACCAGGGTGTTCACCTaGCTTTCCCCGCCTTCGAACTGGGCGAGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: SRLFAAATRVFT*LSPPSNWARLC
Trigger: GCACAACCTCGCCCAGTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGGTGGCCGCGGCAAACAGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GACATGGTCTGGATGCTGCTGGGCAGGGACTCATCGTCGATGTTCTaGGCGAAGAGCTGGACGGCGAGGGAGAGGTCGCTGAGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: DMVWMLLGRDSSSMF*AKSWTARERSLRGR
Trigger: CCTGCCCCTCAGCGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGAACATCGACGATGAGTCCCTGCCCAGCAGCATCCAGACCATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp TGTGTGACCATGGCGAAGGCGGCACGGTCGTGGCTATCGGCCAGGTaGATGACGTTGGTGATGGACGGGAGCATGGCTCCTTGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: CVTMAKAARSWLSAR*MTLVMDGSMAPWQL
Trigger: CAGCTGCCAAGGAGCCATGCTCCCGTCCATCACCAACGTCATCAACCTGGCCGATAGCCACGACCGTGCCGCCTTCGCCATGGTCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp TTCAGCGCGCTGGGCTGGCAGTCCCGCTGCACCTGGTaGCTGCCGCTGCACAGAAATGGACTTATCTCACCC +
Preference number: 6 (lower is better)
Translates to: FSALGWQSRCTW*LPLHRNGLISP
Trigger: GGGTGAGATAAGTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGACTGCCAGCCCAGCGCGCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS TCA 72 bp GCATGCTGCGCGGCACCATGTTACTCTGAACCTCCTTaGGGATGTCGCGGAGGACCTGGTGGCTGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: ACCAAPCYSEPP*GCRGGPGGWLG
Trigger: CCCAAGCCAGCCACCAGGTCCTCCGCGACATCCTCAAGGAGGTTCAGAGTAACATGGTGCCGCGCAGCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TGTCCCCGGATGTACAGCCGCCGGGCTGCGGTGTTGTaGTTCTGCACAATCTCTACCCGGGGCATGAACCGT +
Preference number: 6 (lower is better)
Translates to: CPRMYSRRAAVL*FCTISTRGMNR
Trigger: ACGGTTCATGCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTACATCCGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CTTGCCATTGTGTCCCCGGATGTACAGCCGCCGGGCTaGGGTGTTGTGCTTCTGCACAATCTCTACCCGGGG +
Preference number: 6 (lower is better)
Translates to: LAIVSPDVQPPG*GVVLLHNLYPG
Trigger: CCCCGGGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTACATCCGGGGACACAATGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CCCCAGGTACTTCAGGACGCAGGGTCGGATGGGGATTaGCGGCACGCACTGGGACATGGCTTCCACAAAGCA +
Preference number: 6 (lower is better)
Translates to: PQVLQDAGSDGD*RHALGHGFHKA
Trigger: TGCTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCCTGAAGTACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 72 bp GTGTCTTCCCCAGGTACTTCAGGACGCAGGGTCGGATaGGGATTGGCGGCACGCACTGGGACATGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: VSSPGTSGRRVG*GLAARTGTWLP
Trigger: TGGAAGCCATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCCTGAAGTACCTGGGGAAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 72 bp ACCAGGGTGTTCACCTTGCTTTCCCCGCCTTCGAACTaGGCGAGGTTGTGCAGGCGGGTCATGATGGCGGTG +
Preference number: 6 (lower is better)
Translates to: TRVFTLLSPPSN*ARLCRRVMMAV
Trigger: CACCGCCATCATGACCCGCCTGCACAACCTCGCCCAGTTCGAAGGCGGGGAAAGCAAGGTGAACACCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TGGATGCTGCTGGGCAGGGACTCATCGTCGATGTTCTaGGCGAAGAGCTGGACGGCGAGGGAGAGGTCGCTG +
Preference number: 6 (lower is better)
Translates to: WMLLGRDSSSMF*AKSWTARERSL
Trigger: CAGCGACCTCTCCCTCGCCGTCCAGCTCTTCGCCAAGAACATCGACGATGAGTCCCTGCCCAGCAGCATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp GCGATAATGTGCGCCAGGAGCAAGTGTCCGCTGTACTaGCAGGCTGGGTCCACGCAGGCCTTGGAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: AIMCARSKCPLY*QAGSTQALESR
Trigger: CCTGCTCTCCAAGGCCTGCGTGGACCCAGCCTGCAAGTACAGCGGACACTTGCTCCTGGCGCACATTATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp ATGGCGAAGGCGGCACGGTCGTGGCTATCGGCCAGGTaGATGACGTTGGTGATGGACGGGAGCATGGCTCCT +
Preference number: 6 (lower is better)
Translates to: MAKAARSWLSAR*MTLVMDGSMAP
Trigger: AGGAGCCATGCTCCCGTCCATCACCAACGTCATCAACCTGGCCGATAGCCACGACCGTGCCGCCTTCGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TCCCCAGGTACTTCAGGACGCAGGGTCGGATGGGGATaGGCGGCACGCACTGGGACATGGCTTCCACAAAGC +
Preference number: 6 (lower is better)
Translates to: SPGTSGRRVGWG*AARTGTWLPQS
Trigger: GCTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCCTGAAGTACCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CAA 90 bp ATCGGCCAGGTTGATGACGTTGGTGATGGACGGGAGCATGGCTCCTaGGCAGCTGGTGCCAATGGGGGTGCTCTTCTCACACACGGCCAG +
Preference number: 6 (lower is better)
Translates to: IGQVDDVGDGREHGS*AAGANGGALLTHGQ
Trigger: CTGGCCGTGTGTGAGAAGAGCACCCCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCCGTCCATCACCAACGTCATCAACCTGGCCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GCTCCACTGTCTGCGAGGGATGTCGAGTCAGGAACTTaGTCAGGGGCTCTCGGAATGGACTCCCCGCCTCGA +
Preference number: 6 (lower is better)
Translates to: APLSARDVESGT*SGALGMDSPPR
Trigger: TCGAGGCGGGGAGTCCATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGACATCCCTCGCAGACAGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp ACAGAAGGGTGGGGTGGAGCTCTCGCTGCATGTGCATaGTTCGGCTGCAGCGCCACATGGGTGCTGTTGCTC +
Preference number: 6 (lower is better)
Translates to: TEGWGGALAACA*FGCSATWVLLL
Trigger: GAGCAACAGCACCCATGTGGCGCTGCAGCCGAATCATGCACATGCAGCGAGAGCTCCACCCCACCCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp CAGACGCAGCAGCTGCAACACACGCTCCTCTCGCCGTaGCTCTGTGAGGCAGGCGTCGTTCATGACGAGGTA +
Preference number: 6 (lower is better)
Translates to: QTQQLQHTLLSP*LCEAGVVHDEV
Trigger: TACCTCGTCATGAACGACGCCTGCCTCACAGAGTCACGGCGAGAGGAGCGTGTGTTGCAGCTGCTGCGTCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp CCGTGGCATTGGGGAAGGTGTGCAGCGCCCACTCCTTaGGCATGCTGCGCGGCACCATGTTACTCTGAACCT +
Preference number: 6 (lower is better)
Translates to: PWHWGRCAAPTP*ACCAAPCYSEP
Trigger: AGGTTCAGAGTAACATGGTGCCGCGCAGCATGCTCAAGGAGTGGGCGCTGCACACCTTCCCCAATGCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GCAGCGCTCCAGTCTATGAACAGAAAGACAACAGGCTaGGATGGCCACGGGCTGGGGGTGCCTCGCACAACC +
Preference number: 6 (lower is better)
Translates to: AALQSMNRKTTG*DGHGLGVPRTT
Trigger: GGTTGTGCGAGGCACCCCCAGCCCGTGGCCATCTCAGCCTGTTGTCTTTCTGTTCATAGACTGGAGCGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480695.1
CDS GCA 72 bp GCAAGGCAGCAAGAAAGGGCCACACTGCTGGGCGACTaGCACCATCGTATAGTGGCGGATCAAGCTGGCGAC +
Preference number: 6 (lower is better)
Translates to: ARQQERATLLGD*HHRIVADQAGD
Trigger: GTCGCCAGCTTGATCCGCCACTATACGATGGTGGCAGTCGCCCAGCAGTGTGGCCCTTTCTTGCTGCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GGAGCATGGCTCCTTGGCAGCTGGTGCCAATGGGGGTaGTCTTCTCACACACGGCCAGAAGCAGCTCAATGC +
Preference number: 6 (lower is better)
Translates to: GAWLLGSWCQWG*SSHTRPEAAQC
Trigger: GCATTGAGCTGCTTCTGGCCGTGTGTGAGAAGAGCACCCCCATTGGCACCAGCTGCCAAGGAGCCATGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CGGATGTACAGCCGCCGGGCTGCGGTGTTGTGCTTCTaGACAATCTCTACCCGGGGCATGAACCGTGCAATC +
Preference number: 6 (lower is better)
Translates to: RMYSRRAAVLCF*TISTRGMNRAI
Trigger: GATTGCACGGTTCATGCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTACATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GAGCAGCTGTGGGATCCAGGCCAGCCACTGGATGGGTaGCACACCAATGCAGTACTTGTCGACGGCATCTGC +
Preference number: 6 (lower is better)
Translates to: EQLWDPGQPLDG*HTNAVLVDGIC
Trigger: GCAGATGCCGTCGACAAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTGGCCTGGATCCCACAGCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp AGGCAGGTGAGCAGCTGTGGGATCCAGGCCAGCCACTaGATGGGTGGCACACCAATGCAGTACTTGTCGACG +
Preference number: 6 (lower is better)
Translates to: RQVSSCGIQASH*MGGTPMQYLST
Trigger: CGTCGACAAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTGGCCTGGATCCCACAGCTGCTCACCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp AGCTCCACTGTCTGCGAGGGATGTCGAGTCAGGAACTaGATCAGGGGCTCTCGGAATGGACTCCCCGCCTCG +
Preference number: 6 (lower is better)
Translates to: SSTVCEGCRVRN*IRGSRNGLPAS
Trigger: CGAGGCGGGGAGTCCATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGACATCCCTCGCAGACAGTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp GGCCAGGCGAAGGTCATGAGGCGGCGCAGCTTGCTGTaGCGGTTCTTGTTGTTGTCATGGATGTGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: GQAKVMRRRSLL*RFLLLSWMWWG
Trigger: CCCCCACCACATCCATGACAACAACAAGAACCGCAACAGCAAGCTGCGCCGCCTCATGACCTTCGCCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TTGTGTCCCCGGATGTACAGCCGCCGGGCTGCGGTGTaGTGCTTCTGCACAATCTCTACCCGGGGCATGAAC +
Preference number: 6 (lower is better)
Translates to: LCPRMYSRRAAV*CFCTISTRGMN
Trigger: GTTCATGCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTACATCCGGGGACACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp CATCACCAAGCACTCCTGGGCAGGGCTGATGTCTCCTaGGAGCAGTCGGGCCATCATGCACTGGCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: HHQALLGRADVS*EQSGHHALASA
Trigger: GGCTGAAGCCAGTGCATGATGGCCCGACTGCTCCAAGGAGACATCAGCCCTGCCCAGGAGTGCTTGGTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482799.3
CDS CAA 90 bp TGCTCGCTCTTGGAACGGATGCAGTCCACCAGGTTCAGCAGGAGCTaGCAGGACATGGTCTGGATGCTGCTGGGCAGGGACTCATCGTCG +
Preference number: 6 (lower is better)
Translates to: CSLLERMQSTRFSRS*QDMVWMLLGRDSSS
Trigger: CGACGATGAGTCCCTGCCCAGCAGCATCCAGACCATGTCCTGCAAGCTCCTGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GTCGGGCTGCAGGTTGTCCACACACAGCTCCAGCGTCCTGAGGCCTaGGCTGACCAATGTCTGAGACCCATTGAGTGCAGACACCAAGGG +
Preference number: 6 (lower is better)
Translates to: VGLQVVHTQLQRPEA*ADQCLRPIECRHQG
Trigger: CCCTTGGTGTCTGCACTCAATGGGTCTCAGACATTGGTCAGCCAAGGCCTCAGGACGCTGGAGCTGTGTGTGGACAACCTGCAGCCCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp TGTGTGTCTTCCCCAGGTACTTCAGGACGCAGGGTCGGATGGGGATaGGCGGCACGCACTGGGACATGGCTTCCACAAAGCAGTTCAGCG +
Preference number: 6 (lower is better)
Translates to: CVSSPGTSGRRVGWG*AARTGTWLPQSSSA
Trigger: CGCTGAACTGCTTTGTGGAAGCCATGTCCCAGTGCGTGCCGCCAATCCCCATCCGACCCTGCGTCCTGAAGTACCTGGGGAAGACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CAA 90 bp CGGGCCAGAGACTCAGAGGCTGCGCTGGAGAACATGGTCGAGACGTaGGACACATTCTCCAGGCCCACCCCAAACGTGCTCACCAACTTC +
Preference number: 6 (lower is better)
Translates to: RARDSEAALENMVET*DTFSRPTPNVLTNF
Trigger: GAAGTTGGTGAGCACGTTTGGGGTGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGTCTCTGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp AAAATCCGTCGTGAACTGGCCTTTCAGCTTCTGAAAGACAGGGTCTaGTGCAGTGGCCTGCGCCCGCCGGGCCAGAGACTCAGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: KIRRELAFQLLKDRV*CSGLRPPGQRLRGC
Trigger: GCAGCCTCTGAGTCTCTGGCCCGGCGGGCGCAGGCCACTGCACAAGACCCTGTCTTTCAGAAGCTGAAAGGCCAGTTCACGACGGATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GGCGCAGCGCTGCTTGTAGATCTCCACAAGGGAAAGTaGAGAGGGGTTGTCCTCCACGAGGCGCATCTGTGG +
Preference number: 6 (lower is better)
Translates to: GAALLVDLHKGK*RGVVLHEAHLW
Trigger: CCACAGATGCGCCTCGTGGAGGACAACCCCTCTTCACTTTCCCTTGTGGAGATCTACAAGCAGCGCTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp CACTCCTTGAGCATGCTGCGCGGCACCATGTTACTCTaGACCTCCTTGAGGATGTCGCGGAGGACCTGGTGG +
Preference number: 6 (lower is better)
Translates to: HSLSMLRGTMLL*TSLRMSRRTWW
Trigger: CCACCAGGTCCTCCGCGACATCCTCAAGGAGGTTCAGAGTAACATGGTGCCGCGCAGCATGCTCAAGGAGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp CTCCAGTGCTCATCACCAAGCACTCCTGGGCAGGGCTaGTGTCTCCTTGGAGCAGTCGGGCCATCATGCACT +
Preference number: 6 (lower is better)
Translates to: LQCSSPSTPGQG*CLLGAVGPSCT
Trigger: AGTGCATGATGGCCCGACTGCTCCAAGGAGACATCAGCCCTGCCCAGGAGTGCTTGGTGATGAGCACTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482799.3
CDS GCA 72 bp CAAACTTACCGAGCACACGGTAGGCCACGTGGGAGATaGTGTCAGCAGGGTTGCGTAAGGTGCGCCACAGAG +
Preference number: 6 (lower is better)
Translates to: QTYRAHGRPRGR*CQQGCVRCATE
Trigger: CTCTGTGGCGCACCTTACGCAACCCTGCTGACAGCATCTCCCACGTGGCCTACCGTGTGCTCGGTAAGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp ACCGTGACACTCTTCCCAGTGACCTGGGCCAACACCTaGAGCGAATGCATGGCCTGCTTCCTCACAGTGGAG +
Preference number: 6 (lower is better)
Translates to: TVTLFPVTWANT*SECMACFLTVE
Trigger: CTCCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGTCACTGGGAAGAGTGTCACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GAAGACAGAAGGGTGGGGTGGAGCTCTCGCTGCATGTaGATGATTCGGCTGCAGCGCCACATGGGTGCTGTT +
Preference number: 6 (lower is better)
Translates to: EDRRVGWSSRCM*MIRLQRHMGAV
Trigger: AACAGCACCCATGTGGCGCTGCAGCCGAATCATGCACATGCAGCGAGAGCTCCACCCCACCCTTCTGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CTCTTCTCCAAACAGGGGTTCAGCAGACGCAGCAGCTaGAACACACGCTCCTCTCGCCGTGACTCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: LFSKQGFSRRSS*NTRSSRRDSVR
Trigger: CCTCACAGAGTCACGGCGAGAGGAGCGTGTGTTGCAGCTGCTGCGTCTGCTGAACCCCTGTTTGGAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GGACGTCTCTCCCATTGCCACTCTCCTGCTCGCTCTTaGAACGGATGCAGTCCACCAGGTTCAGCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: GRLSHCHSPARS*NGCSPPGSAGA
Trigger: AGCTCCTGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp TCTTGGAAGTTCTCACTCACCCACACACGTCGCAACTaGCTCACCAGAGAGTGCTGGCTGGCCAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: SWKFSLTHTRRN*LTRECWLASQE
Trigger: CTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCAGTTGCGACGTGTGTGGGTGAGTGAGAACTTCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp TTGCTGTTGCGGTTCTTGTTGTTGTCATGGATGTGGTaGGGGGCGTGCTCCACCAGCAGCGTGGCGTACTGC +
Preference number: 6 (lower is better)
Translates to: LLLRFLLLSWMW*GACSTSSVAYC
Trigger: GCAGTACGCCACGCTGCTGGTGGAGCACGCCCCCCACCACATCCATGACAACAACAAGAACCGCAACAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GTCCCGCTGCACCTGGTGACTGCCGCTGCACAGAAATaGACTTATCTCACCCGCGAGTGCATGCTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: VPLHLVTAAAQK*TYLTRECMLLS
Trigger: AGACAGCAGCATGCACTCGCGGGTGAGATAAGTCCATTTCTGTGCAGCGGCAGTCACCAGGTGCAGCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 72 bp TTCGGCTGCAGCGCCACATGGGTGCTGTTGCTCTTATaGGCCCTGGATCGCTCTTGTAGCGTTCCCGCTGTT +
Preference number: 6 (lower is better)
Translates to: FGCSATWVLLLL*ALDRSCSVPAV
Trigger: AACAGCGGGAACGCTACAAGAGCGATCCAGGGCCCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355540.7
ENST00000359863.8
CDS CCA 72 bp ATCACCAAGCACTCCTGGGCAGGGCTGATGTCTCCTTaGAGCAGTCGGGCCATCATGCACTGGCTTCAGCCA +
Preference number: 6 (lower is better)
Translates to: ITKHSWAGLMSP*SSRAIMHWLQP
Trigger: TGGCTGAAGCCAGTGCATGATGGCCCGACTGCTCCAAGGAGACATCAGCCCTGCCCAGGAGTGCTTGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482799.3
CDS CCA 72 bp GCTCCAGTCTATGAACAGAAAGACAACAGGCTGAGATaGCCACGGGCTGGGGGTGCCTCGCACAACCACGCT +
Preference number: 6 (lower is better)
Translates to: APVYEQKDNRLR*PRAGGASHNHA
Trigger: AGCGTGGTTGTGCGAGGCACCCCCAGCCCGTGGCCATCTCAGCCTGTTGTCTTTCTGTTCATAGACTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480695.1
CDS CAA 72 bp AGGACGTCTCTCCCATTGCCACTCTCCTGCTCGCTCTaGGAACGGATGCAGTCCACCAGGTTCAGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: RTSLPLPLSCSL*ERMQSTRFSRS
Trigger: GCTCCTGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp AGGCAGGGCCAGGCGAAGGTCATGAGGCGGCGCAGCTaGCTGTTGCGGTTCTTGTTGTTGTCATGGATGTGG +
Preference number: 6 (lower is better)
Translates to: RQGQAKVMRRRS*LLRFLLLSWMW
Trigger: CCACATCCATGACAACAACAAGAACCGCAACAGCAAGCTGCGCCGCCTCATGACCTTCGCCTGGCCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp ATCCGCATCAGGACGTCTCTCCCATTGCCACTCTCCTGCTCGCTCTaGGAACGGATGCAGTCCACCAGGTTCAGCAGGAGCTTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: IRIRTSLPLPLSCSL*ERMQSTRFSRSLQD
Trigger: GTCCTGCAAGCTCCTGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCCTGATGCGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp TCAAAAGCCTGGTGCTCCAACATCAGCGTGGACCGGAACCAGAGGTaGTGTGTCTTCCCCAGGTACTTCAGGACGCAGGGTCGGATGGGG +
Preference number: 6 (lower is better)
Translates to: SKAWCSNISVDRNQR*CVFPRYFRTQGRMG
Trigger: CCCCATCCGACCCTGCGTCCTGAAGTACCTGGGGAAGACACACAACCTCTGGTTCCGGTCCACGCTGATGTTGGAGCACCAGGCTTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CAA 90 bp ATCTTGCCATTGTGTCCCCGGATGTACAGCCGCCGGGCTGCGGTGTaGTGCTTCTGCACAATCTCTACCCGGGGCATGAACCGTGCAATC +
Preference number: 6 (lower is better)
Translates to: ILPLCPRMYSRRAAV*CFCTISTRGMNRAI
Trigger: GATTGCACGGTTCATGCCCCGGGTAGAGATTGTGCAGAAGCACAACACCGCAGCCCGGCGGCTGTACATCCGGGGACACAATGGCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp CTCCTTCCAGTTGGTGGCTGCCATGTTCTCCTTGCGGTGCCTCTCTaGGAAGTTCTCACTCACCCACACACGTCGCAACTGGCTCACCAG +
Preference number: 6 (lower is better)
Translates to: LLPVGGCHVLLAVPL*EVLTHPHTSQLAHQ
Trigger: CTGGTGAGCCAGTTGCGACGTGTGTGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAAGGAGAACATGGCAGCCACCAACTGGAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp CAGGCCACGCGGATAAGGAAGTTCACCACAGTGTCTGTGTGCTGCTaGTCAATGGGCTTGGCGAGGAGAGAGTCTGCTCCAGGTAGCGAC +
Preference number: 6 (lower is better)
Translates to: QATRIRKFTTVSVCC*SMGLARRESAPGSD
Trigger: GTCGCTACCTGGAGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGCAGCACACAGACACTGTGGTGAACTTCCTTATCCGCGTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp ATGCTCATCAGGCGCGAGAGAAGGCTGTGGACGGCTCGCAACACCTaGGTGTTTCCACATGTCATGCAGGCGGCAATTCCACGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: MLIRRERRLWTARNT*VFPHVMQAAIPRCR
Trigger: TCTGCAGCGTGGAATTGCCGCCTGCATGACATGTGGAAACACCAAGGTGTTGCGAGCCGTCCACAGCCTTCTCTCGCGCCTGATGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GTCAACGGGCCGGAGACCCCGATGGTGGTCAGAAACTCAGAAATGTaGGGCGTGAGTCGAAATGGGACAGGACGGTTGGCATCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: VNGPETPMVVRNSEM*GVSRNGTGRLASRS
Trigger: AGACCTGGATGCCAACCGTCCTGTCCCATTTCGACTCACGCCCAACATTTCTGAGTTTCTGACCACCATCGGGGTCTCCGGCCCGTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp CCGCACTCGGAAATGCTTTCGTTTCCGTCGCTCCTCTGGCCCCCTTaGTGGGTGATCACCACCACTTCCATCCACTTGCGCAGATGTTGC +
Preference number: 6 (lower is better)
Translates to: PHSEMLSFPSLLWPP*WVITTTSIHLRRCC
Trigger: GCAACATCTGCGCAAGTGGATGGAAGTGGTGGTGATCACCCACAAAGGGGGCCAGAGGAGCGACGGAAACGAAAGCATTTCCGAGTGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359863.8
ENST00000456197.2
CDS TCA 72 bp GGTACGGCAAAAGCGAGCTCAGCCGCACAGGGACGGTaGGACACAGCTCCACAAAGAGGTCCTTCATGTGCT +
Preference number: 6 (lower is better)
Translates to: GTAKASSAAQGR*DTAPQRGPSCA
Trigger: AGCACATGAAGGACCTCTTTGTGGAGCTGTGTCTCACCGTCCCTGTGCGGCTGAGCTCGCTTTTGCCGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp CCACAGTCATCAGCAGCTTGTCGAACCACTGCAGCTTaGGTTCGGACTTGGGCCACATGTCTGGCCGCAACG +
Preference number: 6 (lower is better)
Translates to: PQSSAACRTTAA*VRTWATCLAAT
Trigger: CGTTGCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GTACCTGAGGTGGCTTCGGTGCTTCCTGACGCTGCCTaGGGGTTTAAATGCTCCCGGACCATCTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VPEVASVLPDAA*GFKCSRTIFCR
Trigger: CCTGCAGAAGATGGTCCGGGAGCATTTAAACCCTCAGGCAGCGTCAGGAAGCACCGAAGCCACCTCAGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS TCA 72 bp GCGTCGTGGAAATGTGGCACAGCTGAACGAAAGCGCTaGGCAGCGCTCCAGTCTTCACCTCTCGGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: ASWKCGTAERKR*AALQSSPLGEC
Trigger: ACACTCTCCGAGAGGTGAAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTCCACGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GTCTTCTCTGCCAGCGTCGTGGAAATGTGGCACAGCTaGACGAAAGCGCTGAGCAGCGCTCCAGTCTTCACC +
Preference number: 6 (lower is better)
Translates to: VFSASVVEMWHS*TKALSSAPVFT
Trigger: GGTGAAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTCCACGACGCTGGCAGAGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp TTGTGCAGGCGGGTCATGATGGCGGTGACGGCTTTCTaGACCAGGGACACCAGTTGCTGGCTGTCCATGTTC +
Preference number: 6 (lower is better)
Translates to: LCRRVMMAVTAF*TRDTSCWLSMF
Trigger: GAACATGGACAGCCAGCAACTGGTGTCCCTGGTTCAGAAAGCCGTCACCGCCATCATGACCCGCCTGCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp TGGGTGCTTGCAGCTCCCCTGGCCGGGGCTTCGGAGTaGCTTTCTGCATCTCTTCTTCTCAAGTCACCAGTG +
Preference number: 6 (lower is better)
Translates to: WVLAAPLAGASE*LSASLLLKSPV
Trigger: CACTGGTGACTTGAGAAGAAGAGATGCAGAAAGTCACTCCGAAGCCCCGGCCAGGGGAGCTGCAAGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS GCA 72 bp TCCCATTGCCACTCTCCTGCTCGCTCTTGGAACGGATaGAGTCCACCAGGTTCAGCAGGAGCTTGCAGGACA +
Preference number: 6 (lower is better)
Translates to: SHCHSPARSWNG*SPPGSAGACRT
Trigger: TGTCCTGCAAGCTCCTGCTGAACCTGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp ATCCGCATCAGGACGTCTCTCCCATTGCCACTCTCCTaGTCGCTCTTGGAACGGATGCAGTCCACCAGGTTC +
Preference number: 6 (lower is better)
Translates to: IRIRTSLPLPLS*SLLERMQSTRF
Trigger: GAACCTGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCCTGATGCGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TGCGCACCGCATCAGAAGCTGCTCCAGCGTGGTCTTTaGCATAGCGACTGCCCCATTGGAAACCTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: CAPHQKLLQRGL*HSDCPIGNLSS
Trigger: ACTGGAGAGGTTTCCAATGGGGCAGTCGCTATGGCAAAGACCACGCTGGAGCAGCTTCTGATGCGGTGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CTCACCCACACACGTCGCAACTGGCTCACCAGAGAGTaGTGGCTGGCCAGCCAGGAGTCATCGTTTTTCACT +
Preference number: 6 (lower is better)
Translates to: LTHTRRNWLTRE*WLASQESSFFT
Trigger: AGTGAAAAACGATGACTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCAGTTGCGACGTGTGTGGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GGCTGCTCCACAGTCATCAGCAGCTTGTCGAACCACTaGAGCTTGAGTTCGGACTTGGGCCACATGTCTGGC +
Preference number: 6 (lower is better)
Translates to: GCSTVISSLSNH*SLSSDLGHMSG
Trigger: GCCAGACATGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGTGGAGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp AGGCCACACTGGAAGTACTCGGCTCTGTTGGGAAAATaGTCATCAGGCGCGAGAGAAGGCTGTGGACGGCTC +
Preference number: 6 (lower is better)
Translates to: RPHWKYSALLGK*SSGAREGCGRL
Trigger: GAGCCGTCCACAGCCTTCTCTCGCGCCTGATGAGCATTTTCCCAACAGAGCCGAGTACTTCCAGTGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GCATCACCAGCTCGCTTGTACCTGAGGTGGCTTCGGTaGTTCCTGACGCTGCCTGAGGGTTTAAATGCTCCC +
Preference number: 6 (lower is better)
Translates to: ASPARLYLRWLR*FLTLPEGLNAP
Trigger: GGGAGCATTTAAACCCTCAGGCAGCGTCAGGAAGCACCGAAGCCACCTCAGGTACAAGCGAGCTGGTGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS GCA 72 bp GTGCATGATTCGGCTGCAGCGCCACATGGGTGCTGTTaGTCTTATGGGCCCTGGATCGCTCTTGTAGCGTTC +
Preference number: 6 (lower is better)
Translates to: VHDSAAAPHGCC*SYGPWIALVAF
Trigger: GAACGCTACAAGAGCGATCCAGGGCCCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCCGAATCATGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355540.7
ENST00000359863.8
CDS GCA 72 bp TCACCAGCTCGCTTGTACCTGCTGAGGTGGCTTCGGTaGTTCCTGACGCTGCCTGAGGGTTTAAATGCTCCC +
Preference number: 6 (lower is better)
Translates to: SPARLYLLRWLR*FLTLPEGLNAP
Trigger: GGGAGCATTTAAACCCTCAGGCAGCGTCAGGAAGCACCGAAGCCACCTCAGCAGGTACAAGCGAGCTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446306.7
ENST00000628380.2
CDS CCA 72 bp TCCACCAGGTTCAGCAGGAGCTTGCAGGACATGGTCTaGATGCTGCTGGGCAGGGACTCATCGTCGATGTTC +
Preference number: 6 (lower is better)
Translates to: STRFSRSLQDMV*MLLGRDSSSMF
Trigger: GAACATCGACGATGAGTCCCTGCCCAGCAGCATCCAGACCATGTCCTGCAAGCTCCTGCTGAACCTGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CTTCCCACGCCTGCCTCCGGTAGTAGGGCTCAGTGTTaGCGCTTTTCAGGCAGTCCAGAGCAGTTTCAATGG +
Preference number: 6 (lower is better)
Translates to: LPTPASGSRAQC*RFSGSPEQFQW
Trigger: CCATTGAAACTGCTCTGGACTGCCTGAAAAGCGCCAACACTGAGCCCTACTACCGGAGGCAGGCGTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp TCACCACAGTGTCTGTGTGCTGCTTGTCAATGGGCTTaGCGAGGAGAGAGTCTGCTCCAGGTAGCGACTGGC +
Preference number: 6 (lower is better)
Translates to: SPQCLCAACQWA*RGESLLQVATG
Trigger: GCCAGTCGCTACCTGGAGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGCAGCACACAGACACTGTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp TTGATGACGTTGGTGATGGACGGGAGCATGGCTCCTTaGCAGCTGGTGCCAATGGGGGTGCTCTTCTCACAC +
Preference number: 6 (lower is better)
Translates to: LMTLVMDGSMAP*QLVPMGVLFSH
Trigger: GTGTGAGAAGAGCACCCCCATTGGCACCAGCTGCCAAGGAGCCATGCTCCCGTCCATCACCAACGTCATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp TTGACATGTGTGACCATGGCGAAGGCGGCACGGTCGTaGCTATCGGCCAGGTTGATGACGTTGGTGATGGAC +
Preference number: 6 (lower is better)
Translates to: LTCVTMAKAARS*LSARLMTLVMD
Trigger: GTCCATCACCAACGTCATCAACCTGGCCGATAGCCACGACCGTGCCGCCTTCGCCATGGTCACACATGTCAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp AGATGCTGCTCCAGTGGGACAAGTCGTCAGACACGATaGGCAGTCGGTTCCTCCAGGTCTTCACCACCGTCT +
Preference number: 6 (lower is better)
Translates to: RCCSSGTSRQTR*AVGSSRSSPPS
Trigger: AGACGGTGGTGAAGACCTGGAGGAACCGACTGCCCATCGTGTCTGACGACTTGTCCCACTGGAGCAGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp ACTCAGAGGCTGCGCTGGAGAACATGGTCGAGACGTTaGACACATTCTCCAGGCCCACCCCAAACGTGCTCA +
Preference number: 6 (lower is better)
Translates to: TQRLRWRTWSRR*THSPGPPQTCS
Trigger: TGAGCACGTTTGGGGTGGGCCTGGAGAATGTGTCCAACGTCTCGACCATGTTCTCCAGCGCAGCCTCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GGAGATGGACCGAGACCCTCCGAGGCTGGATCCACATaGCAGGCAGAGCTACCTCCATCAAAACTGGATGGA +
Preference number: 6 (lower is better)
Translates to: GDGPRPSEAGST*QAELPPSKLDG
Trigger: TCCATCCAGTTTTGATGGAGGTAGCTCTGCCTGCCATGTGGATCCAGCCTCGGAGGGTCTCGGTCCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417523.5
CDS CCA 72 bp AGTTGGCAGCTATGGGGTCCAGGTATTGTCCACCACTaGACTGAAGGTGGCAGGCAGGGTAGGGTTTGCCAC +
Preference number: 6 (lower is better)
Translates to: SWQLWGPGIVHH*TEGGRQGRVCH
Trigger: GTGGCAAACCCTACCCTGCCTGCCACCTTCAGTCCAGTGGTGGACAATACCTGGACCCCATAGCTGCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417523.5
CDS CAA 72 bp AGGCGCGAGAGAAGGCTGTGGACGGCTCGCAACACCTaGGTGTTTCCACATGTCATGCAGGCGGCAATTCCA +
Preference number: 6 (lower is better)
Translates to: RRERRLWTARNT*VFPHVMQAAIP
Trigger: TGGAATTGCCGCCTGCATGACATGTGGAAACACCAAGGTGTTGCGAGCCGTCCACAGCCTTCTCTCGCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TGGTGCTCCAACATCAGCGTGGACCGGAACCAGAGGTaGTGTGTCTTCCCCAGGTACTTCAGGACGCAGGGT +
Preference number: 6 (lower is better)
Translates to: WCSNISVDRNQR*CVFPRYFRTQG
Trigger: ACCCTGCGTCCTGAAGTACCTGGGGAAGACACACAACCTCTGGTTCCGGTCCACGCTGATGTTGGAGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CAA 90 bp TTGAGAACGAAAACCTCCAGCATCCGCATCAGGACGTCTCTCCCATaGCCACTCTCCTGCTCGCTCTTGGAACGGATGCAGTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: LRTKTSSIRIRTSLP*PLSCSLLERMQSTR
Trigger: CCTGGTGGACTGCATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCCTGATGCGGATGCTGGAGGTTTTCGTTCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp ATCATGAACAGCTCCACTGTCTGCGAGGGATGTCGAGTCAGGAACTaGATCAGGGGCTCTCGGAATGGACTCCCCGCCTCGATCAGCATC +
Preference number: 6 (lower is better)
Translates to: IMNSSTVCEGCRVRN*IRGSRNGLPASISI
Trigger: GATGCTGATCGAGGCGGGGAGTCCATTCCGAGAGCCCCTGATCAAGTTCCTGACTCGACATCCCTCGCAGACAGTGGAGCTGTTCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp TTTGGCTGCTCCACAGTCATCAGCAGCTTGTCGAACCACTGCAGCTaGAGTTCGGACTTGGGCCACATGTCTGGCCGCAACGCAGTCTTC +
Preference number: 6 (lower is better)
Translates to: FGCSTVISSLSNHCS*SSDLGHMSGRNAVF
Trigger: GAAGACTGCGTTGCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGTGGAGCAGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GAAGTTTCCGCACGCAGCGCTCTCATGAGACACGTGGCCCTTAGGTaGAGAAGTAGAGATACGTGCTATCCCCCTAGTGCCTGCACGGTG +
Preference number: 6 (lower is better)
Translates to: EVSARSALMRHVALR*RSRDTCYPPSACTV
Trigger: CACCGTGCAGGCACTAGGGGGATAGCACGTATCTCTACTTCTCAACCTAAGGGCCACGTGTCTCATGAGAGCGCTGCGTGCGGAAACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS TCA 72 bp TCCCCGCCTCGATCAGCATCGCCCGCTCCGTTTTCATaGCAACCTCTAGCAAAGGCTTCACCAGTGTCTGAG +
Preference number: 6 (lower is better)
Translates to: SPPRSASPAPFS*QPLAKASPVSE
Trigger: CTCAGACACTGGTGAAGCCTTTGCTAGAGGTTGTCATGAAAACGGAGCGGGCGATGCTGATCGAGGCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TTAATGACAGCAGACATGAAGGCGCCTGTCAGGGCCTaGTCAAAAGTCTTCCGGGCTGGAGTGTCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: LMTADMKAPVRA*SKVFRAGVSWA
Trigger: AGCCCAGGACACTCCAGCCCGGAAGACTTTTGAGCAGGCCCTGACAGGCGCCTTCATGTCTGCTGTCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TCGTCTTTTAAAGGCGTTGCGCACCGCATCAGAAGCTaGTCCAGCGTGGTCTTTGCCATAGCGACTGCCCCA +
Preference number: 6 (lower is better)
Translates to: SSFKGVAHRIRS*SSVVFAIATAP
Trigger: TGGGGCAGTCGCTATGGCAAAGACCACGCTGGAGCAGCTTCTGATGCGGTGCGCAACGCCTTTAAAAGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GTGACCTGGGCCAACACCTGCAGCGAATGCATGGCCTaGTTCCTCACAGTGGAGTTTGGAGAGGTGACTTCT +
Preference number: 6 (lower is better)
Translates to: VTWANTCSECMA*FLTVEFGEVTS
Trigger: AGAAGTCACCTCTCCAAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCTGCAGGTGTTGGCCCAGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CGGTTCCTCCAGGTCTTCACCACCGTCTTCATGTCGTaGAGGCTGTTGTTCCTTCCCAGGTTGGTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: RFLQVFTTVFMS*RLLFLPRLVGC
Trigger: ACAGCCAACCAACCTGGGAAGGAACAACAGCCTGCACGACATGAAGACGGTGGTGAAGACCTGGAGGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CACATGGCCCAGGCTTTCACCAGCACATCGTGCATCTaGACAGCTGCAGAGAAGGCTTTGTTTGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: HMAQAFTSTSCI*TAAEKALFASS
Trigger: CGAGGAGGCAAACAAAGCCTTCTCTGCAGCTGTGCAGATGCACGATGTGCTGGTGAAAGCCTGGGCCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CTGCATGTGCATGATTCGGCTGCAGCGCCACATGGGTaGTGTTGCTCTTATGGGCCCTGGATCGCTCTTGTA +
Preference number: 6 (lower is better)
Translates to: LHVHDSAAAPHG*CCSYGPWIALV
Trigger: TACAAGAGCGATCCAGGGCCCATAAGAGCAACAGCACCCATGTGGCGCTGCAGCCGAATCATGCACATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355540.7
ENST00000359863.8
CDS GCA 72 bp AGACACGTGGCCCTTAGGTTGAGAAGTAGAGATACGTaGTATCCCCCTAGTGCCTGCACGGTGGGGAACTGG +
Preference number: 6 (lower is better)
Translates to: RHVALRLRSRDT*YPPSACTVGNW
Trigger: CCAGTTCCCCACCGTGCAGGCACTAGGGGGATAGCACGTATCTCTACTTCTCAACCTAAGGGCCACGTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CCA 72 bp TTGGTGGCTGCCATGTTCTCCTTGCGGTGCCTCTCTTaGAAGTTCTCACTCACCCACACACGTCGCAACTGG +
Preference number: 6 (lower is better)
Translates to: LVAAMFSLRCLS*KFSLTHTRRNW
Trigger: CCAGTTGCGACGTGTGTGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAAGGAGAACATGGCAGCCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp TACACCTTGAAGTGTTGCACTATCAGGTGCAGAATGTaGACCAGCTGCGGGACGGTGTGCCCCTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: YTLKCCTIRCRM*TSCGTVCPSST
Trigger: TGTGGAGGAGGGGCACACCGTCCCGCAGCTGGTCCACATTCTGCACCTGATAGTGCAACACTTCAAGGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp ATGGCTCCGGTGGCCGTCCTAAAGCGTTTCACTTCCTaGGCAGAATCCACGGACAGGCCTCTCTTAATGGAG +
Preference number: 6 (lower is better)
Translates to: MAPVAVLKRFTS*AESTDRPLLME
Trigger: CTCCATTAAGAGAGGCCTGTCCGTGGATTCTGCCCAGGAAGTGAAACGCTTTAGGACGGCCACCGGAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp AAAACCTCCAGCATCCGCATCAGGACGTCTCTCCCATaGCCACTCTCCTGCTCGCTCTTGGAACGGATGCAG +
Preference number: 6 (lower is better)
Translates to: KTSSIRIRTSLP*PLSCSLLERMQ
Trigger: CTGCATCCGTTCCAAGAGCGAGCAGGAGAGTGGCAATGGGAGAGACGTCCTGATGCGGATGCTGGAGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp CGATCTCTTCGGCTCTCTCCTCGTCTTTTAAAGGCGTaGCGCACCGCATCAGAAGCTGCTCCAGCGTGGTCT +
Preference number: 6 (lower is better)
Translates to: RSLRLSPRLLKA*RTASEAAPAWS
Trigger: AGACCACGCTGGAGCAGCTTCTGATGCGGTGCGCAACGCCTTTAAAAGACGAGGAGAGAGCCGAAGAGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp GTTGGTGGCTGCCATGTTCTCCTTGCGGTGCCTCTCTaGGAAGTTCTCACTCACCCACACACGTCGCAACTG +
Preference number: 6 (lower is better)
Translates to: VGGCHVLLAVPL*EVLTHPHTSQL
Trigger: CAGTTGCGACGTGTGTGGGTGAGTGAGAACTTCCAAGAGAGGCACCGCAAGGAGAACATGGCAGCCACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TTCACCACAGTGTCTGTGTGCTGCTTGTCAATGGGCTaGGCGAGGAGAGAGTCTGCTCCAGGTAGCGACTGG +
Preference number: 6 (lower is better)
Translates to: FTTVSVCCLSMG*ARRESAPGSDW
Trigger: CCAGTCGCTACCTGGAGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGCAGCACACAGACACTGTGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp AGCAGCTTGTCGAACCACTGCAGCTTGAGTTCGGACTaGGGCCACATGTCTGGCCGCAACGCAGTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: SSLSNHCSLSSD*GHMSGRNAVFR
Trigger: TCTGAAGACTGCGTTGCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TCCACAGTCATCAGCAGCTTGTCGAACCACTGCAGCTaGAGTTCGGACTTGGGCCACATGTCTGGCCGCAAC +
Preference number: 6 (lower is better)
Translates to: STVISSLSNHCS*SSDLGHMSGRN
Trigger: GTTGCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp CATGTCATGCAGGCGGCAATTCCACGCTGCAGAGGTTaGAAGCTACTGAGGATGGCTGGGGACTGGAGGACA +
Preference number: 6 (lower is better)
Translates to: HVMQAAIPRCRG*KLLRMAGDWRT
Trigger: TGTCCTCCAGTCCCCAGCCATCCTCAGTAGCTTCAAACCTCTGCAGCGTGGAATTGCCGCCTGCATGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp CAGGTCTTCACCACCGTCTTCATGTCGTGCAGGCTGTaGTTCCTTCCCAGGTTGGTTGGCTGTAAGCCTGCG +
Preference number: 6 (lower is better)
Translates to: QVFTTVFMSCRL*FLPRLVGCKPA
Trigger: CGCAGGCTTACAGCCAACCAACCTGGGAAGGAACAACAGCCTGCACGACATGAAGACGGTGGTGAAGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp GGTCAGGTACAGGGTCCGGATGGGAAAGTAGACCGCTaGGGGATACACGCGTCCAACCTGGCTAATGAGGTT +
Preference number: 6 (lower is better)
Translates to: GQVQGPDGKVDR*GIHASNLANEV
Trigger: AACCTCATTAGCCAGGTTGGACGCGTGTATCCCCAAGCGGTCTACTTTCCCATCCGGACCCTGTACCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp CCGGAGACCCCGATGGTGGTCAGAAACTCAGAAATGTaGGGCGTGAGTCGAAATGGGACAGGACGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: PETPMVVRNSEM*GVSRNGTGRLA
Trigger: TGCCAACCGTCCTGTCCCATTTCGACTCACGCCCAACATTTCTGAGTTTCTGACCACCATCGGGGTCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GTGTTTCCACATGTCATGCAGGCGGCAATTCCACGCTGCAGAGGTTaGAAGCTACTGAGGATGGCTGGGGACTGGAGGACAGTTAGCAGG +
Preference number: 6 (lower is better)
Translates to: VFPHVMQAAIPRCRG*KLLRMAGDWRTVSR
Trigger: CCTGCTAACTGTCCTCCAGTCCCCAGCCATCCTCAGTAGCTTCAAACCTCTGCAGCGTGGAATTGCCGCCTGCATGACATGTGGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp AGCTCCAGCGTCCTGAGGCCTTGGCTGACCAATGTCTaGGACCCATTGAGTGCAGACACCAAGGGATCCATA +
Preference number: 6 (lower is better)
Translates to: SSSVLRPWLTNV*DPLSADTKGSI
Trigger: TATGGATCCCTTGGTGTCTGCACTCAATGGGTCTCAGACATTGGTCAGCCAAGGCCTCAGGACGCTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GCTGGAGAGAAGCTTTGCAGTCGGAAAACTCCACAGTaGTGCTGGGGCCCTGAACCTCGGTCACAACGTAGT +
Preference number: 6 (lower is better)
Translates to: AGEKLCSRKTPQ*CWGPEPRSQRS
Trigger: ACTACGTTGTGACCGAGGTTCAGGGCCCCAGCATCACTGTGGAGTTTTCCGACTGCAAAGCTTCTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp TGCTCCACTGGGGATCGTTCAGTGTGGCTTCCATCATaGACAGCTCCACTGTCTGCGAGGGATGTCGAGTCA +
Preference number: 6 (lower is better)
Translates to: CSTGDRSVWLPS*TAPLSARDVES
Trigger: TGACTCGACATCCCTCGCAGACAGTGGAGCTGTTCATGATGGAAGCCACACTGAACGATCCCCAGTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp AAGTCAAAATCCGTCGTGAACTGGCCTTTCAGCTTCTaGAAGACAGGGTCTTGTGCAGTGGCCTGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: KSKSVVNWPFSF*KTGSCAVACAR
Trigger: GCGGGCGCAGGCCACTGCACAAGACCCTGTCTTTCAGAAGCTGAAAGGCCAGTTCACGACGGATTTTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp CGAATTCCGCGAAGCCTATCAGAGCCAGCTGGATGGTaGACATCTTCCGGAACGTCCAGTAGTCCGTGGCAT +
Preference number: 6 (lower is better)
Translates to: RIPRSLSEPAGW*TSSGTSSSPWH
Trigger: ATGCCACGGACTACTGGACGTTCCGGAAGATGTTCACCATCCAGCTGGCTCTGATAGGCTTCGCGGAATTCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp CCCCGATGGTGGTCAGAAACTCAGAAATGTTGGGCGTaGGTCGAAATGGGACAGGACGGTTGGCATCCAGGT +
Preference number: 6 (lower is better)
Translates to: PRWWSETQKCWA*VEMGQDGWHPG
Trigger: ACCTGGATGCCAACCGTCCTGTCCCATTTCGACTCACGCCCAACATTTCTGAGTTTCTGACCACCATCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GTCTTCTCTGCCAGCGTCGTGGAAATGTGGCACAGCTaGACGAAAGCGCTGAGCAGCGCTCCAGTCTATGAA +
Preference number: 6 (lower is better)
Translates to: VFSASVVEMWHS*TKALSSAPVYE
Trigger: TTCATAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTCCACGACGCTGGCAGAGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480695.1
CDS GCA 72 bp TCCACCACGTTAAGGTCCATTGTGAAGAGCCTGGGCTaGAACGTGGTACAGAACGTGTTCCCCTCCATCAGG +
Preference number: 6 (lower is better)
Translates to: STTLRSIVKSLG*NVVQNVFPSIR
Trigger: CCTGATGGAGGGGAACACGTTCTGTACCACGTTGCAGCCCAGGCTCTTCACAATGGACCTTAACGTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GGCCATCGCCTGTCTGACGATCGCTCGAGCTTCCATTaGGTGAGCCTTGAGGAGACTATGAAAAACCTGCAG +
Preference number: 6 (lower is better)
Translates to: GHRLSDDRSSFH*VSLEETMKNLQ
Trigger: CTGCAGGTTTTTCATAGTCTCCTCAAGGCTCACGCAATGGAAGCTCGAGCGATCGTCAGACAGGCGATGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp AAGTGTTGCACTATCAGGTGCAGAATGTGGACCAGCTaGGGGACGGTGTGCCCCTCCTCCACAATGATCTTC +
Preference number: 6 (lower is better)
Translates to: KCCTIRCRMWTS*GTVCPSSTMIF
Trigger: GAAGATCATTGTGGAGGAGGGGCACACCGTCCCGCAGCTGGTCCACATTCTGCACCTGATAGTGCAACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GCCACGCGGATAAGGAAGTTCACCACAGTGTCTGTGTaGTGCTTGTCAATGGGCTTGGCGAGGAGAGAGTCT +
Preference number: 6 (lower is better)
Translates to: ATRIRKFTTVSV*CLSMGLARRES
Trigger: AGACTCTCTCCTCGCCAAGCCCATTGACAAGCAGCACACAGACACTGTGGTGAACTTCCTTATCCGCGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GTGTTTCCACATGTCATGCAGGCGGCAATTCCACGCTaGAGAGGTTTGAAGCTACTGAGGATGGCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: VFPHVMQAAIPR*RGLKLLRMAGD
Trigger: GTCCCCAGCCATCCTCAGTAGCTTCAAACCTCTGCAGCGTGGAATTGCCGCCTGCATGACATGTGGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GCTCGTAAGCAATCGCAGTCGCTGTCTCCGAGTACTTaGACCGCTTCTGCCACAGACCAGCCCACATATCTT +
Preference number: 6 (lower is better)
Translates to: ARKQSQSLSPST*TASATDQPTYL
Trigger: AAGATATGTGGGCTGGTCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAGCGACTGCGATTGCTTACGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS GCA 72 bp GGATCCAGGCCAGCCACTGGATGGGTGGCACACCAATaGAGTACTTGTCGACGGCATCTGCCAAAGTGTTTT +
Preference number: 6 (lower is better)
Translates to: GSRPATGWVAHQ*STCRRHLPKCF
Trigger: AAAACACTTTGGCAGATGCCGTCGACAAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTGGCCTGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GGTCATAGTAACGGGAGATGGGGTTGTCATGCTCGATaGCCTTCTTGGCGCAGCGCTGCTTGTAGATCTCCA +
Preference number: 6 (lower is better)
Translates to: GHSNGRWGCHAR*PSWRSAACRSP
Trigger: TGGAGATCTACAAGCAGCGCTGCGCCAAGAAGGGCATCGAGCATGACAACCCCATCTCCCGTTACTATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp ACCAAGTCGTGTGTCACATGGTGGAAAGACTTTTCCTaGGCGGCCACGATCTCTTCGGCTCTCTCCTCGTCT +
Preference number: 6 (lower is better)
Translates to: TKSCVTWWKDFS*AATISSALSSS
Trigger: AGACGAGGAGAGAGCCGAAGAGATCGTGGCCGCCCAGGAAAAGTCTTTCCACCATGTGACACACGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp ACCCACACACGTCGCAACTGGCTCACCAGAGAGTGCTaGCTGGCCAGCCAGGAGTCATCGTTTTTCACTATA +
Preference number: 6 (lower is better)
Translates to: THTRRNWLTREC*LASQESSFFTI
Trigger: TATAGTGAAAAACGATGACTCCTGGCTGGCCAGCCAGCACTCTCTGGTGAGCCAGTTGCGACGTGTGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GTTGGGAAAATGCTCATCAGGCGCGAGAGAAGGCTGTaGACGGCTCGCAACACCTTGGTGTTTCCACATGTC +
Preference number: 6 (lower is better)
Translates to: VGKMLIRRERRL*TARNTLVFPHV
Trigger: GACATGTGGAAACACCAAGGTGTTGCGAGCCGTCCACAGCCTTCTCTCGCGCCTGATGAGCATTTTCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GCCAGAAGCAGCTCAATGCACTGCTTGATCCAGAAGTaGTTCCCCATGGCTTCCCAGTTCTGCGAACAGGTC +
Preference number: 6 (lower is better)
Translates to: ARSSSMHCLIQK*FPMASQFCEQV
Trigger: GACCTGTTCGCAGAACTGGGAAGCCATGGGGAACCACTTCTGGATCAAGCAGTGCATTGAGCTGCTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp AACGGGAGATGGGGTTGTCATGCTCGATGCCCTTCTTaGCGCAGCGCTGCTTGTAGATCTCCACAAGGGAAA +
Preference number: 6 (lower is better)
Translates to: NGRWGCHARCPS*RSAACRSPQGK
Trigger: TTTCCCTTGTGGAGATCTACAAGCAGCGCTGCGCCAAGAAGGGCATCGAGCATGACAACCCCATCTCCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GGTCAGAAACTCAGAAATGTTGGGCGTGAGTCGAAATaGGACAGGACGGTTGGCATCCAGGTCTCCAGTCGC +
Preference number: 6 (lower is better)
Translates to: GQKLRNVGRESK*DRTVGIQVSSR
Trigger: GCGACTGGAGACCTGGATGCCAACCGTCCTGTCCCATTTCGACTCACGCCCAACATTTCTGAGTTTCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GCTGAGCAAATCTTCATTTCGTTTCCGTCGCTCCTCTGGCCCCCTTaGTGGGTGATCACCACCACTTCCATCCACTTGCGCAGATGTTGC +
Preference number: 6 (lower is better)
Translates to: AEQIFISFPSLLWPP*WVITTTSIHLRRCC
Trigger: GCAACATCTGCGCAAGTGGATGGAAGTGGTGGTGATCACCCACAAAGGGGGCCAGAGGAGCGACGGAAACGAAATGAAGATTTGCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000446306.7
ENST00000628380.2
CDS CAA 90 bp ACAGTCATCAGCAGCTTGTCGAACCACTGCAGCTTGAGTTCGGACTaGGGCCACATGTCTGGCCGCAACGCAGTCTTCAGAAGGTTCACA +
Preference number: 6 (lower is better)
Translates to: TVISSLSNHCSLSSD*GHMSGRNAVFRRFT
Trigger: TGTGAACCTTCTGAAGACTGCGTTGCGGCCAGACATGTGGCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp CTGAGCAGCGCTCCAGTCTTCACCTCTCGGAGAGTGTCCAGAAACTaGTCGTGCCTGTTGGTTAGCATGTGCAGCTGGTTTCCAATGTCC +
Preference number: 6 (lower is better)
Translates to: LSSAPVFTSRRVSRN*SCLLVSMCSWFPMS
Trigger: GGACATTGGAAACCAGCTGCACATGCTAACCAACAGGCACGACAAGTTTCTGGACACTCTCCGAGAGGTGAAGACTGGAGCGCTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp TGCAGGCTGTTGTTCCTTCCCAGGTTGGTTGGCTGTAAGCCTGCGTaGATTTGTGCAGCTTCCTGGAGTTCGATGATTTGCTGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: CRLLFLPRLVGCKPA*ICAASWSSMICWAA
Trigger: GGCAGCCCAGCAAATCATCGAACTCCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACAACAGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp CGGTTCCTCCAGGTCTTCACCACCGTCTTCATGTCGTGCAGGCTGTaGTTCCTTCCCAGGTTGGTTGGCTGTAAGCCTGCGTTGATTTGT +
Preference number: 6 (lower is better)
Translates to: RFLQVFTTVFMSCRL*FLPRLVGCKPALIC
Trigger: ACAAATCAACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACAACAGCCTGCACGACATGAAGACGGTGGTGAAGACCTGGAGGAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GCGAGACCCTGTCTCTTGAAATGGTGTTTGGAGAAAAAGGGCATATaGTCTGCATGGTCTGGACCCTCCTCACTCTGGAGCCGGCAGCCT +
Preference number: 6 (lower is better)
Translates to: ARPCLLKWCLEKKGI*SAWSGPSSLWSRQP
Trigger: AGGCTGCCGGCTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGAGACAGGGTCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS TCA 72 bp TCTCACACACGGCCAGAAGCAGCTCAATGCACTGCTTaGTCCAGAAGTGGTTCCCCATGGCTTCCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: SHTRPEAAQCTA*SRSGSPWLPSS
Trigger: AGAACTGGGAAGCCATGGGGAACCACTTCTGGATCAAGCAGTGCATTGAGCTGCTTCTGGCCGTGTGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GGGGTGCCTCGCACAACCACGCTCAGAAGACACCCATaGTCTGTCTCATACATTACCGATGCTCCTCCACTT +
Preference number: 6 (lower is better)
Translates to: GVPRTTTLRRHP*SVSYITDAPPL
Trigger: AAGTGGAGGAGCATCGGTAATGTATGAGACAGATCATGGGTGTCTTCTGAGCGTGGTTGTGCGAGGCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480695.1
CDS GCA 72 bp GAGGCCTTGGCTGACCAATGTCTGAGACCCATTGAGTaGAGACACCAAGGGATCCATAAGCATGGGCAGGTA +
Preference number: 6 (lower is better)
Translates to: EALADQCLRPIE*RHQGIHKHGQV
Trigger: TACCTGCCCATGCTTATGGATCCCTTGGTGTCTGCACTCAATGGGTCTCAGACATTGGTCAGCCAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TTCAGTGTGGCTTCCATCATGAACAGCTCCACTGTCTaGGAGGGATGTCGAGTCAGGAACTTGATCAGGGGC +
Preference number: 6 (lower is better)
Translates to: FSVASIMNSSTV*EGCRVRNLIRG
Trigger: GCCCCTGATCAAGTTCCTGACTCGACATCCCTCGCAGACAGTGGAGCTGTTCATGATGGAAGCCACACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TCCATATCTGAATCCGGCTGCTGGTCCTTGATCCTCTaGAGCTCCCACTTGATGACGACTTCAGACAGGTCC +
Preference number: 6 (lower is better)
Translates to: SISESGCWSLIL*SSHLMTTSDRS
Trigger: GGACCTGTCTGAAGTCGTCATCAAGTGGGAGCTGCAGAGGATCAAGGACCAGCAGCCGGATTCAGATATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GTTGGTGAGCCCTTCATAGATGACCTTTCCGACGGCTaGGTAGAGGCACTCCAGCTCTTCATATTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: VGEPFIDDLSDG*VEALQLFIFGG
Trigger: GCCTCCAAATATGAAGAGCTGGAGTGCCTCTACGCAGCCGTCGGAAAGGTCATCTATGAAGGGCTCACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp ATCGCAGTCGCTGTCTCCGAGTACTTGCACCGCTTCTaGCACAGACCAGCCCACATATCTTCCTCTTGTAAC +
Preference number: 6 (lower is better)
Translates to: IAVAVSEYLHRF*HRPAHISSSCN
Trigger: GTTACAAGAGGAAGATATGTGGGCTGGTCTGTGGCAGAAGCGGTGCAAGTACTCGGAGACAGCGACTGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS GCA 72 bp CCAGGCTTTCACCAGCACATCGTGCATCTGCACAGCTaGAGAGAAGGCTTTGTTTGCCTCCTCGGACTTGTT +
Preference number: 6 (lower is better)
Translates to: PGFHQHIVHLHS*REGFVCLLGLV
Trigger: AACAAGTCCGAGGAGGCAAACAAAGCCTTCTCTGCAGCTGTGCAGATGCACGATGTGCTGGTGAAAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp AAAGCCACAGCACCTTGGCTAAGTATTTCCTCGATTTaGTCTCGTTCTGATGCCGGCAGGCGTGCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: KATAPWLSISSI*SRSDAGRRAGS
Trigger: GCTACCTGCACGCCTGCCGGCATCAGAACGAGAGCAAATCGAGGAAATACTTAGCCAAGGTGCTGTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GGAGAGGTGACTTCTCGAACCAAGTCGTGTGTCACATaGTGGAAAGACTTTTCCTGGGCGGCCACGATCTCT +
Preference number: 6 (lower is better)
Translates to: GEVTSRTKSCVT*WKDFSWAATIS
Trigger: AGAGATCGTGGCCGCCCAGGAAAAGTCTTTCCACCATGTGACACACGACTTGGTTCGAGAAGTCACCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CAGCGAATGCATGGCCTGCTTCCTCACAGTGGAGTTTaGAGAGGTGACTTCTCGAACCAAGTCGTGTGTCAC +
Preference number: 6 (lower is better)
Translates to: QRMHGLLPHSGV*RGDFSNQVVCH
Trigger: GTGACACACGACTTGGTTCGAGAAGTCACCTCTCCAAACTCCACTGTGAGGAAGCAGGCCATGCATTCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CTGTCAGAGAGGATCTTCCACAATCTGGGGAAAAGCTaGACCCACGTCTTCTCTGCCAGCGTCGTGGAAATG +
Preference number: 6 (lower is better)
Translates to: LSERIFHNLGKS*THVFSASVVEM
Trigger: CATTTCCACGACGCTGGCAGAGAAGACGTGGGTCCAGCTTTTCCCCAGATTGTGGAAGATCCTCTCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000480695.1
ENST00000628380.2
CDS CCA 72 bp GCTGTTCTATTTTCAGGGTCAGGTACAGGGTCCGGATaGGAAAGTAGACCGCTTGGGGATACACGCGTCCAA +
Preference number: 6 (lower is better)
Translates to: AVLFSGSGTGSG*ESRPLGDTRVQ
Trigger: TTGGACGCGTGTATCCCCAAGCGGTCTACTTTCCCATCCGGACCCTGTACCTGACCCTGAAAATAGAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GCTCTTATGGGCCCTGGATCTGATGCAGAATGGGACTaGTTACCCACTGAACTTGGCTGCTGCTGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: ALMGPGSDAEWD*LPTELGCCCPE
Trigger: TTCTGGACAGCAGCAGCCAAGTTCAGTGGGTAACCAGTCCCATTCTGCATCAGATCCAGGGCCCATAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp ACGTGCTATCCCCCTAGTGCCTGCACGGTGGGGAACTaGATACCTTGGAACTGGGAATTATCTTGGATCCCA +
Preference number: 6 (lower is better)
Translates to: TCYPPSACTVGN*IPWNWELSWIP
Trigger: TGGGATCCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGCACTAGGGGGATAGCACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 72 bp ACACTGGTGATGCTTTCTGGGTTATCTCCTTCTGGATaGGGAGGTCCCAAGAGCTGCTCTCCTTCCCCCTTC +
Preference number: 6 (lower is better)
Translates to: TLVMLSGLSPSG*GGPKSCSPSPF
Trigger: GAAGGGGGAAGGAGAGCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAACCCAGAAAGCATCACCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp CGGATAAGGAAGTTCACCACAGTGTCTGTGTGCTGCTaGTCAATGGGCTTGGCGAGGAGAGAGTCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: RIRKFTTVSVCC*SMGLARRESAP
Trigger: TGGAGCAGACTCTCTCCTCGCCAAGCCCATTGACAAGCAGCACACAGACACTGTGGTGAACTTCCTTATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TTCACTTGGTTTGGCTGCTCCACAGTCATCAGCAGCTaGTCGAACCACTGCAGCTTGAGTTCGGACTTGGGC +
Preference number: 6 (lower is better)
Translates to: FTWFGCSTVISS*SNHCSLSSDLG
Trigger: GCCCAAGTCCGAACTCAAGCTGCAGTGGTTCGACAAGCTGCTGATGACTGTGGAGCAGCCAAACCAAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp TTCACCACCGTCTTCATGTCGTGCAGGCTGTTGTTCCTTCCCAGGTaGGTTGGCTGTAAGCCTGCGTTGATTTGTGCAGCTTCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: FTTVFMSCRLLFLPR*VGCKPALICAASWS
Trigger: ACTCCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACAACAGCCTGCACGACATGAAGACGGTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp CCAGGCAGAGCTGCTTCCACGGCTCCAAGTTCTGACTaGGGCTTACACTTCTTAAAAATGGCAGAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PGRAASTAPSSD*GLHFLKMAESW
Trigger: CCAGCTCTCTGCCATTTTTAAGAAGTGTAAGCCTCAGTCAGAACTTGGAGCCGTGGAAGCAGCTCTGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp CACCCCAGGCAGAGCTGCTTCCACGGCTCCAAGTTCTaGCTGAGGCTTACACTTCTTAAAAATGGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: HPRQSCFHGSKF*LRLTLLKNGRE
Trigger: CTCTCTGCCATTTTTAAGAAGTGTAAGCCTCAGTCAGAACTTGGAGCCGTGGAAGCAGCTCTGCCTGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GCGTCGTGGAAATGTGGCACAGCTGAACGAAAGCGCTaGGCAGCGCTCCAGTCTATGAACAGAAAGACAACA +
Preference number: 6 (lower is better)
Translates to: ASWKCGTAERKR*AALQSMNRKTT
Trigger: TGTTGTCTTTCTGTTCATAGACTGGAGCGCTGCTCAGCGCTTTCGTTCAGCTGTGCCACATTTCCACGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480695.1
CDS GCA 72 bp CCCCAGCTTTGCATACCACGCCTGTTCATAACAACATaGACACAGGCGCTCCACGATGTAAGAAAACAGGGG +
Preference number: 6 (lower is better)
Translates to: PQLCIPRLFITT*TQALHDVRKQG
Trigger: CCCCTGTTTTCTTACATCGTGGAGCGCCTGTGTGCATGTTGTTATGAACAGGCGTGGTATGCAAAGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp AAGGCCCTGCATGCACTCGTTTTTGCCCATGACGCCTaGCAGCTGGAGGTAGCATTTAACTTGCTGTCGAAT +
Preference number: 6 (lower is better)
Translates to: KALHALVFAHDA*QLEVAFNLLSN
Trigger: ATTCGACAGCAAGTTAAATGCTACCTCCAGCTGGCAGGCGTCATGGGCAAAAACGAGTGCATGCAGGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CACGAACTGTCGCTTCAGCAGCCCCAAGCTGGTCATTaGCGCATCGAAGTGTCCAGAGAAGAAATCTTTGAG +
Preference number: 6 (lower is better)
Translates to: HELSLQQPQAGH*RIEVSREEIFE
Trigger: CTCAAAGATTTCTTCTCTGGACACTTCGATGCGGCAATGACCAGCTTGGGGCTGCTGAAGCGACAGTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS GCA 72 bp TTGAGAAGTAGAGATACGTGCTATCCCCCTAGTGCCTaGACGGTGGGGAACTGGATACCTTGGAACTGGGAA +
Preference number: 6 (lower is better)
Translates to: LRSRDTCYPPSA*TVGNWIPWNWE
Trigger: TTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGCACTAGGGGGATAGCACGTATCTCTACTTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CCA 72 bp AAACACACTGGTGATGCTTTCTGGGTTATCTCCTTCTaGATTGGGAGGTCCCAAGAGCTGCTCTCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: KHTGDAFWVISF*IGRSQELLSFP
Trigger: GGGGAAGGAGAGCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAACCCAGAAAGCATCACCAGTGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GTTGGCTGTAAGCCTGCGTTGATTTGTGCAGCTTCCTaGAGTTCGATGATTTGCTGGGCTGCCTGTAGGAGA +
Preference number: 6 (lower is better)
Translates to: VGCKPALICAAS*SSMICWAACRR
Trigger: TCTCCTACAGGCAGCCCAGCAAATCATCGAACTCCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp TGTACCTCCCTTAGCCCTGAAAAGCTTGGTGCTGTCTaGGAACTTTCCAATGAAGAAACCCTTCTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: CTSLSPEKLGAV*ELSNEETLLAG
Trigger: CCCGGCCAGAAGGGTTTCTTCATTGGAAAGTTCCCAGACAGCACCAAGCTTTTCAGGGCTAAGGGAGGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 72 bp CTCATACAGGCTTCTCCGGCCTCTTGGAGCTCACTATaGGTGGAATTCAGGGCTTTGAAGAGTGCAGCGATG +
Preference number: 6 (lower is better)
Translates to: LIQASPASWSSL*VEFRALKSAAM
Trigger: CATCGCTGCACTCTTCAAAGCCCTGAATTCCACCAATAGTGAGCTCCAAGAGGCCGGAGAAGCCTGTATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp GCTCCAGTCTTCACCTCTCGGAGAGTGTCCAGAAACTaGTCGTGCCTGTTGGTTAGCATGTGCAGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: APVFTSRRVSRN*SCLLVSMCSWF
Trigger: AAACCAGCTGCACATGCTAACCAACAGGCACGACAAGTTTCTGGACACTCTCCGAGAGGTGAAGACTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp GTCTTCATGTCGTGCAGGCTGTTGTTCCTTCCCAGGTaGGTTGGCTGTAAGCCTGCGTTGATTTGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: VFMSCRLLFLPR*VGCKPALICAA
Trigger: AGCTGCACAAATCAACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACAACAGCCTGCACGACATGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp GCCAGCCACTGGATGGGTGGCACACCAATGCAGTACTaGTCGACGGCATCTGCCAAAGTGTTTTTGTCATCA +
Preference number: 6 (lower is better)
Translates to: ASHWMGGTPMQY*STASAKVFLSS
Trigger: TGATGACAAAAACACTTTGGCAGATGCCGTCGACAAGTACTGCATTGGTGTGCCACCCATCCAGTGGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp CTCAAACGCCACGGAGTAACATTTCGCCAGGCCCTGTaGGAGCTGCCTGAGAACCTCTTCATGCCAATTTTC +
Preference number: 6 (lower is better)
Translates to: LKRHGVTFRQAL*ELPENLFMPIF
Trigger: GAAAATTGGCATGAAGAGGTTCTCAGGCAGCTCCAACAGGGCCTGGCGAAATGTTACTCCGTGGCGTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp AAGACCAGCTTGAACAGCTTGAGGTACAGGTTGGAGAGCTCCACGTaGGAGCCCATTTCTGGCAGGCGATCAAGGAGATATTCCACCAGA +
Preference number: 6 (lower is better)
Translates to: KTSLNSLRYRLESST*EPISGRRSRRYSTR
Trigger: TCTGGTGGAATATCTCCTTGATCGCCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCAACCTGTACCTCAAGCTGTTCAAGCTGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp CACCTTCTCTGCTGTGTGGATCTCAGTCTTTTCAAGAGAAGTCATTaGCCCTTCTCCAGTGCTCATCACCAAGCACTCCTGGGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: HLLCCVDLSLFKRSH*PFSSAHHQALLGRA
Trigger: AGCCCTGCCCAGGAGTGCTTGGTGATGAGCACTGGAGAAGGGCAAATGACTTCTCTTGAAAAGACTGAGATCCACACAGCAGAGAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482799.3
CDS CAA 90 bp TGCCTGCACGGTGGGGAACTGGATACCTTGGAACTGGGAATTATCTaGGATCCCATATTTAGTGTTCCAGGCCTGTCGTGTTCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: CLHGGELDTLELGII*DPIFSVPGLSCSQS
Trigger: GCTCTGAGAACACGACAGGCCTGGAACACTAAATATGGGATCCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS GCA 72 bp TCCATCATGACAAAGAGAAGTGCTTTCAGGAATGTCTaGTGGTTCTGGAGAACCCAAGTGAGAGGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: SIMTKRSAFRNV*WFWRTQVRGSR
Trigger: GCGGCTGCCTCTCACTTGGGTTCTCCAGAACCAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GGGTTATCTCCTTCTGGATTGGGAGGTCCCAAGAGCTaGTCTCCTTCCCCCTTCTCAAAGCTGTACAAGAAA +
Preference number: 6 (lower is better)
Translates to: GLSPSGLGGPKS*SPSPFSKLYKK
Trigger: TTTCTTGTACAGCTTTGAGAAGGGGGAAGGAGAGCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp ACGATCTTCTTGTGTATGGCGAATTTGGCGATAATGTaGGCCAGGAGCAAGTGTCCGCTGTACTTGCAGGCT +
Preference number: 6 (lower is better)
Translates to: TIFLCMANLAIM*ARSKCPLYLQA
Trigger: AGCCTGCAAGTACAGCGGACACTTGCTCCTGGCGCACATTATCGCCAAATTCGCCATACACAAGAAGATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp ACGTTTCATGGAGTTGTCAAAAACCTCGAAAAACTTTaGCCTGATGAGTGGCTGGGCACAGCGCAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: TFHGVVKNLEKL*PDEWLGTAQPR
Trigger: TCTGGGCTGCGCTGTGCCCAGCCACTCATCAGGGCAAAGTTTTTCGAGGTTTTTGACAACTCCATGAAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GTCTTCACCTCTCGGAGAGTGTCCAGAAACTTGTCGTaGCTGTTGGTTAGCATGTGCAGCTGGTTTCCAATG +
Preference number: 6 (lower is better)
Translates to: VFTSRRVSRNLS*LLVSMCSWFPM
Trigger: CATTGGAAACCAGCTGCACATGCTAACCAACAGGCACGACAAGTTTCTGGACACTCTCCGAGAGGTGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp AGAAGGTTTGGATTACGGTGGTGTGGCCAGGTGAGCTaGTTGTTCATTCACCTTCTCTGCTGTGTGGATCTC +
Preference number: 6 (lower is better)
Translates to: RRFGLRWCGQVS*LFIHLLCCVDL
Trigger: GAGATCCACACAGCAGAGAAGGTGAATGAACAAGCAGCTCACCTGGCCACACCACCGTAATCCAAACCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482799.3
CDS CCA 72 bp ATCATGACAAAGAGAAGTGCTTTCAGGAATGTCTGCTaGTTCTGGAGAACCCAAGTGAGAGGCAGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: IMTKRSAFRNVC*FWRTQVRGSRS
Trigger: GGAGCGGCTGCCTCTCACTTGGGTTCTCCAGAACCAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CCCCCTAGTGCCTGCACGGTGGGGAACTGGATACCTTaGAACTGGGAATTATCTTGGATCCCATATTTAGTG +
Preference number: 6 (lower is better)
Translates to: PPSACTVGNWIP*NWELSWIPYLV
Trigger: CACTAAATATGGGATCCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGCACTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CCA 72 bp GTAGAGATACGTGCTATCCCCCTAGTGCCTGCACGGTaGGGAACTGGATACCTTGGAACTGGGAATTATCTT +
Preference number: 6 (lower is better)
Translates to: VEIRAIPLVPAR*GTGYLGTGNYL
Trigger: AAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGCACTAGGGGGATAGCACGTATCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 72 bp ATGGCAGAGAGCTGGTACCGAGCAATTGTGTGGAATTaGAGAACGAAAACCTCCAGCATCCGCATCAGGACG +
Preference number: 6 (lower is better)
Translates to: MAESWYRAIVWN*RTKTSSIRIRT
Trigger: CGTCCTGATGCGGATGCTGGAGGTTTTCGTTCTCAAATTCCACACAATTGCTCGGTACCAGCTCTCTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TTGAACAGCTTGAGGTACAGGTTGGAGAGCTCCACGTaGGAGCCCATTTCTGGCAGGCGATCAAGGAGATAT +
Preference number: 6 (lower is better)
Translates to: LNSLRYRLESST*EPISGRRSRRY
Trigger: ATATCTCCTTGATCGCCTGCCAGAAATGGGCTCCAACGTGGAGCTCTCCAACCTGTACCTCAAGCTGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp AAAACCTGCAGGACGATCTTCTTGTGTATGGCGAATTaGGCGATAATGTGCGCCAGGAGCAAGTGTCCGCTG +
Preference number: 6 (lower is better)
Translates to: KTCRTIFLCMAN*AIMCARSKCPL
Trigger: CAGCGGACACTTGCTCCTGGCGCACATTATCGCCAAATTCGCCATACACAAGAAGATCGTCCTGCAGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GTAATAAACACACTGGTGATGCTTTCTGGGTTATCTCCTTCTGGATaGGGAGGTCCCAAGAGCTGCTCTCCTTCCCCCTTCTCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: VINTLVMLSGLSPSG*GGPKSCSPSPFSKL
Trigger: CAGCTTTGAGAAGGGGGAAGGAGAGCAGCTCTTGGGACCTCCCAATCCAGAAGGAGATAACCCAGAAAGCATCACCAGTGTGTTTATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GCAGAATCCACGGACAGGCCTCTCTTAATGGAGGATGAGACAGAATaGACTCCTTCTCCACTGGAATTTGGGTCCATATCTGAATCCGGC +
Preference number: 6 (lower is better)
Translates to: AESTDRPLLMEDETE*TPSPLEFGSISESG
Trigger: GCCGGATTCAGATATGGACCCAAATTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCTCCATTAAGAGAGGCCTGTCCGTGGATTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp TTCTTGACCCATTCTTCCACGATTTTGACCACAGCCCGGAGGATTTaGGCATCTGGTGATTTTTCGATGAGGGATGTCAGGATGGCCTGG +
Preference number: 6 (lower is better)
Translates to: FLTHSSTILTTARRI*ASGDFSMRDVRMAW
Trigger: CCAGGCCATCCTGACATCCCTCATCGAAAAATCACCAGATGCCAAAATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAATGGGTCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp AGAAACTCAGAAATGTTGGGCGTGAGTCGAAATGGGACAGGACGGTaGGCATCCAGGTCTCCAGTCGCGTCGTTTATGTCAAATCGAAAG +
Preference number: 6 (lower is better)
Translates to: RNSEMLGVSRNGTGR*ASRSPVASFMSNRK
Trigger: CTTTCGATTTGACATAAACGACGCGACTGGAGACCTGGATGCCAACCGTCCTGTCCCATTTCGACTCACGCCCAACATTTCTGAGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp GGCAGAATCCACGGACAGGCCTCTCTTAATGGAGGATaGGACAGAATTGACTCCTTCTCCACTGGAATTTGG +
Preference number: 6 (lower is better)
Translates to: GRIHGQASLNGG*DRIDSFSTGIW
Trigger: CCAAATTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCTCCATTAAGAGAGGCCTGTCCGTGGATTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp CAGAAACTCCCCAGGAATTTCCACTTCAGCTGTCTGTaGCGAGAAATTGCTCAAGAACCGGCACTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: QKLPRNFHFSCL*REIAQEPALFL
Trigger: GAGGAAAAGTGCCGGTTCTTGAGCAATTTCTCGGCACAGACAGCTGAAGTGGAAATTCCTGGGGAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GCGATCTGTAACATCTCGGGGTTGAGTCTATTTAAATaGAGGACGAATTCCGCGAAGCCTATCAGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: AICNISGLSLFK*RTNSAKPIRAS
Trigger: GCTGGCTCTGATAGGCTTCGCGGAATTCGTCCTGCATTTAAATAGACTCAACCCCGAGATGTTACAGATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TACATAAAATTTACCGAGATGGCAGTATTAGGCGGCTaGACGAAGGAAGTTTCCGCACGCAGCGCTCTCATG +
Preference number: 6 (lower is better)
Translates to: YIKFTEMAVLGG*TKEVSARSALM
Trigger: CATGAGAGCGCTGCGTGCGGAAACTTCCTTCGTGCAGCCGCCTAATACTGCCATCTCGGTAAATTTTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CCA 72 bp CCTCTCGGAGAGTGTCCAGAAACTTGTCGTGCCTGTTaGTTAGCATGTGCAGCTGGTTTCCAATGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: PLGECPETCRAC*LACAAGFQCPF
Trigger: AAAAGGACATTGGAAACCAGCTGCACATGCTAACCAACAGGCACGACAAGTTTCTGGACACTCTCCGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GTGAACTGTGATGAACTTGGACCACTGCCGCCAGGCTaGGAAGTCAGAAGTACAGTTTCTGGGAGGATATAT +
Preference number: 6 (lower is better)
Translates to: VNCDELGPLPPG*EVRSTVSGRIY
Trigger: ATATATCCTCCCAGAAACTGTACTTCTGACTTCCCAGCCTGGCGGCAGTGGTCCAAGTTCATCACAGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 72 bp ACCTCTCGGAGAGTGTCCAGAAACTTGTCGTGCCTGTaGGTTAGCATGTGCAGCTGGTTTCCAATGTCCTTT +
Preference number: 6 (lower is better)
Translates to: TSRRVSRNLSCL*VSMCSWFPMSF
Trigger: AAAGGACATTGGAAACCAGCTGCACATGCTAACCAACAGGCACGACAAGTTTCTGGACACTCTCCGAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TTGTTCCTTCCCAGGTTGGTTGGCTGTAAGCCTGCGTaGATTTGTGCAGCTTCCTGGAGTTCGATGATTTGC +
Preference number: 6 (lower is better)
Translates to: LFLPRLVGCKPA*ICAASWSSMIC
Trigger: GCAAATCATCGAACTCCAGGAAGCTGCACAAATCAACGCAGGCTTACAGCCAACCAACCTGGGAAGGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp ATGCAAGGAATGAACTGGTTTCTCAGCTCTGTGGTGAGGATGTGTTaGGCAGCAATCAGAAGCTCCTTTCTGAGGTGTGCAGTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: MQGMNWFLSSVVRMC*AAIRSSFLRCAVSA
Trigger: AGCAGAGACTGCACACCTCAGAAAGGAGCTTCTGATTGCTGCCAAACACATCCTCACCACAGAGCTGAGAAACCAGTTCATTCCTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GCTTCACCAGGTGCTTTGCATGATGTTATGCCCCACGTGATTGTCTaGACACCACACACCAAGGTTTTGACCAAACTTCGACAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: ASPGALHDVMPHVIV*TPHTKVLTKLRQSV
Trigger: CACAGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTGGTGTCAAGACAATCACGTGGGGCATAACATCATGCAAAGCACCTGGTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000456197.2
CDS CAA 90 bp CCAGTCTTCACCTCTCGGAGAGTGTCCAGAAACTTGTCGTGCCTGTaGGTTAGCATGTGCAGCTGGTTTCCAATGTCCTTTTCTGAAAGT +
Preference number: 6 (lower is better)
Translates to: PVFTSRRVSRNLSCL*VSMCSWFPMSFSES
Trigger: ACTTTCAGAAAAGGACATTGGAAACCAGCTGCACATGCTAACCAACAGGCACGACAAGTTTCTGGACACTCTCCGAGAGGTGAAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GAGCTGGGACACAGACACCTTGATAAGGAACCTCTGTGGCTTCTGTaGCTGACTTTTGGTCTCATTCCTCCATACTCAGTTGGACAAACC +
Preference number: 6 (lower is better)
Translates to: ELGHRHLDKEPLWLL*LTFGLIPPYSVGQT
Trigger: GGTTTGTCCAACTGAGTATGGAGGAATGAGACCAAAAGTCAGCAACAGAAGCCACAGAGGTTCCTTATCAAGGTGTCTGTGTCCCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CCA 72 bp TTTCACAGCAATCGTTGTTATCATACCAACCATTTCTaGGGGAGGCACTGTGTTCTCGGGGATCACTTGAGG +
Preference number: 6 (lower is better)
Translates to: FHSNRCYHTNHF*GRHCVLGDHLR
Trigger: CCTCAAGTGATCCCCGAGAACACAGTGCCTCCCCCAGAAATGGTTGGTATGATAACAACGATTGCTGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CAGGACCTTGGTAATAAACACACTGGTGATGCTTTCTaGGTTATCTCCTTCTGGATTGGGAGGTCCCAAGAG +
Preference number: 6 (lower is better)
Translates to: QDLGNKHTGDAF*VISFWIGRSQE
Trigger: CTCTTGGGACCTCCCAATCCAGAAGGAGATAACCCAGAAAGCATCACCAGTGTGTTTATTACCAAGGTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp TCTGGTGATTTTTCGATGAGGGATGTCAGGATGGCCTaGATGAAGTTCTTCCGCATCTCCATGCTCATCACT +
Preference number: 6 (lower is better)
Translates to: SGDFSMRDVRMA*MKFFRISMLIT
Trigger: AGTGATGAGCATGGAGATGCGGAAGAACTTCATCCAGGCCATCCTGACATCCCTCATCGAAAAATCACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CTTCTCCCGGAGTGTAGGTGTCTGATTGGCTGCCATTaGGGAGTTATTCTTGACCCATTCTTCCACGATTTT +
Preference number: 6 (lower is better)
Translates to: LLPECRCLIGCH*GVILDPFFHDF
Trigger: AAAATCGTGGAAGAATGGGTCAAGAATAACTCCCCAATGGCAGCCAATCAGACACCTACACTCCGGGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp AGTGCCTGCACGGTGGGGAACTGGATACCTTGGAACTaGGAATTATCTTGGATCCCATATTTAGTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: SACTVGNWIPWN*ELSWIPYLVFQ
Trigger: CTGGAACACTAAATATGGGATCCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACCGTGCAGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 72 bp GAATGTGTTCGAGTCTCACTGTCCTCACGCTCCGGGTaGACTTTCACAGCAATCGTTGTTATCATACCAACC +
Preference number: 6 (lower is better)
Translates to: ECVRVSLSSRSG*TFTAIVVIIPT
Trigger: GGTTGGTATGATAACAACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGGACAGTGAGACTCGAACACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp ATGAACTGGTTTCTCAGCTCTGTGGTGAGGATGTGTTaGGCAGCAATCAGAAGCTCCTTTCTGAGGTGTGCA +
Preference number: 6 (lower is better)
Translates to: MNWFLSSVVRMC*AAIRSSFLRCA
Trigger: TGCACACCTCAGAAAGGAGCTTCTGATTGCTGCCAAACACATCCTCACCACAGAGCTGAGAAACCAGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp CCCCACGTGATTGTCTTGACACCACACACCAAGGTTTaGACCAAACTTCGACAGTCTGTGACTTGGAATGTC +
Preference number: 6 (lower is better)
Translates to: PHVIVLTPHTKV*TKLRQSVTWNV
Trigger: GACATTCCAAGTCACAGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTGGTGTCAAGACAATCACGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp CATTCTTCCACGATTTTGACCACAGCCCGGAGGATTTaGGCATCTGGTGATTTTTCGATGAGGGATGTCAGG +
Preference number: 6 (lower is better)
Translates to: HSSTILTTARRI*ASGDFSMRDVR
Trigger: CCTGACATCCCTCATCGAAAAATCACCAGATGCCAAAATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TGTCTCTTGAAATGGTGTTTGGAGAAAAAGGGCATATaGTCTGCATGGTCTGGACCCTCCTCACTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: CLLKWCLEKKGI*SAWSGPSSLWS
Trigger: GCTCCAGAGTGAGGAGGGTCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 72 bp GGCAACCTAGCGAGACCCTGTCTCTTGAAATGGTGTTaGGAGAAAAAGGGCATATTGTCTGCATGGTCTGGA +
Preference number: 6 (lower is better)
Translates to: GNLARPCLLKWC*EKKGILSAWSG
Trigger: TCCAGACCATGCAGACAATATGCCCTTTTTCTCCAAACACCATTTCAAGAGACAGGGTCTCGCTAGGTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 72 bp GGTGGGGAACTGGATACCTTGGAACTGGGAATTATCTaGGATCCCATATTTAGTGTTCCAGGCCTGTCGTGT +
Preference number: 6 (lower is better)
Translates to: GGELDTLELGII*DPIFSVPGLSC
Trigger: ACACGACAGGCCTGGAACACTAAATATGGGATCCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 90 bp GGAATGATGGAATGTGTTCGAGTCTCACTGTCCTCACGCTCCGGGTaGACTTTCACAGCAATCGTTGTTATCATACCAACCATTTCTGGG +
Preference number: 6 (lower is better)
Translates to: GMMECVRVSLSSRSG*TFTAIVVIIPTISG
Trigger: CCCAGAAATGGTTGGTATGATAACAACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGGACAGTGAGACTCGAACACATTCCATCATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp GATGTTATGCCCCACGTGATTGTCTTGACACCACACACCAAGGTTTaGACCAAACTTCGACAGTCTGTGACTTGGAATGTCTGCTTGTCT +
Preference number: 6 (lower is better)
Translates to: DVMPHVIVLTPHTKV*TKLRQSVTWNVCLS
Trigger: AGACAAGCAGACATTCCAAGTCACAGACTGTCGAAGTTTGGTCAAAACCTTGGTGTGTGGTGTCAAGACAATCACGTGGGGCATAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp AAAAACTTTCTCATACAGGCTTCTCCGGCCTCTTGGAGCTCACTATaGGTGGAATTCAGGGCTTTGAAGAGTGCAGCGATGATTTTCTCC +
Preference number: 6 (lower is better)
Translates to: KNFLIQASPASWSSL*VEFRALKSAAMIFS
Trigger: GGAGAAAATCATCGCTGCACTCTTCAAAGCCCTGAATTCCACCAATAGTGAGCTCCAAGAGGCCGGAGAAGCCTGTATGAGAAAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp AATGTGTTCGAGTCTCACTGTCCTCACGCTCCGGGTTaGCTTTCACAGCAATCGTTGTTATCATACCAACCA +
Preference number: 6 (lower is better)
Translates to: NVFESHCPHAPG*LSQQSLLSYQP
Trigger: TGGTTGGTATGATAACAACGATTGCTGTGAAAGTCAACCCGGAGCGTGAGGACAGTGAGACTCGAACACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp TCGCTTGTGCAGACACCTGAATGGCAATGGTGTTCATaGTCAAGGGCACAAACTCAGCAACAACATTGTGGA +
Preference number: 6 (lower is better)
Translates to: SLVQTPEWQWCS*SRAQTQQQHCG
Trigger: TCCACAATGTTGTTGCTGAGTTTGTGCCCTTGATCATGAACACCATTGCCATTCAGGTGTCTGCACAAGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp CTGCCCCATTGGAAACCTCTCCAGTTAAGTCCATCATaGCAAAGAGAAGTGCTTTCAGGAATGTCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: LPHWKPLQLSPS*QREVLSGMSAG
Trigger: ACCAGCAGACATTCCTGAAAGCACTTCTCTTTGTCATGATGGACTTAACTGGAGAGGTTTCCAATGGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GGGCATGAACCGTGCAATCTTGATGTAATAATGCGTTaGCTTTGGCATCAGAAACTCCCCAGGAATTTCCAC +
Preference number: 6 (lower is better)
Translates to: GHEPCNLDVIMR*LWHQKLPRNFH
Trigger: GTGGAAATTCCTGGGGAGTTTCTGATGCCAAAGCCAACGCATTATTACATCAAGATTGCACGGTTCATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GTGGGGAACTGGATACCTTGGAACTGGGAATTATCTTaGATCCCATATTTAGTGTTCCAGGCCTGTCGTGTT +
Preference number: 6 (lower is better)
Translates to: VGNWIPWNWELS*IPYLVFQACRV
Trigger: AACACGACAGGCCTGGAACACTAAATATGGGATCCAAGATAATTCCCAGTTCCAAGGTATCCAGTTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 72 bp GGTGCTTTGCATGATGTTATGCCCCACGTGATTGTCTaGACACCACACACCAAGGTTTTGACCAAACTTCGA +
Preference number: 6 (lower is better)
Translates to: GALHDVMPHVIV*TPHTKVLTKLR
Trigger: TCGAAGTTTGGTCAAAACCTTGGTGTGTGGTGTCAAGACAATCACGTGGGGCATAACATCATGCAAAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp ACGGACAGGCCTCTCTTAATGGAGGATGAGACAGAATaGACTCCTTCTCCACTGGAATTTGGGTCCATATCT +
Preference number: 6 (lower is better)
Translates to: TDRPLLMEDETE*TPSPLEFGSIS
Trigger: AGATATGGACCCAAATTCCAGTGGAGAAGGAGTCAATTCTGTCTCATCCTCCATTAAGAGAGGCCTGTCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp ATTGGGGAGTTATTCTTGACCCATTCTTCCACGATTTaGACCACAGCCCGGAGGATTTTGGCATCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: IGELFLTHSSTI*TTARRILASGD
Trigger: ATCACCAGATGCCAAAATCCTCCGGGCTGTGGTCAAAATCGTGGAAGAATGGGTCAAGAATAACTCCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp CTGGCAGTATATCCTGAGCCAATTAGTATGGATTCATCAAACAGCTaGTCCATGCAAGGAATGAACTGGTTTCTCAGCTCTGTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: LAVYPEPISMDSSNS*SMQGMNWFLSSVVR
Trigger: CCTCACCACAGAGCTGAGAAACCAGTTCATTCCTTGCATGGACAAGCTGTTTGATGAATCCATACTAATTGGCTCAGGATATACTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp TATTCTCATAGGCAGTTACAATCGATGATGAATGCATaGCGGACCAGGTCGGTTTACCCTGGTAATGATGCT +
Preference number: 6 (lower is better)
Translates to: YSHRQLQSMMNA*RTRSVYPGNDA
Trigger: AGCATCATTACCAGGGTAAACCGACCTGGTCCGGCATGCATTCATCATCGATTGTAACTGCCTATGAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359863.8
CDS CCA 72 bp TTAAAAATGGCAGAGAGCTGGTACCGAGCAATTGTGTaGAATTTGAGAACGAAAACCTCCAGCATCCGCATC +
Preference number: 6 (lower is better)
Translates to: LKMAESWYRAIV*NLRTKTSSIRI
Trigger: GATGCGGATGCTGGAGGTTTTCGTTCTCAAATTCCACACAATTGCTCGGTACCAGCTCTCTGCCATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp TGGTACTGTAGACATACATTTAGGCTAATGTGGCCATCAGCAAGTTaGACACAGCTAGCTAGGTACCTGGTTACGTCATCAGGGAAACAA +
Preference number: 6 (lower is better)
Translates to: WYCRHTFRLMWPSAS*TQLARYLVTSSGKQ
Trigger: TTGTTTCCCTGATGACGTAACCAGGTACCTAGCTAGCTGTGTCAAACTTGCTGATGGCCACATTAGCCTAAATGTATGTCTACAGTACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS TCA 72 bp AATAATGGGCAATTCTGCCAACACTTTCAGAGAAAGTaGTCCCCTCGGAATGATGGAATGTGTTCGAGTCTC +
Preference number: 6 (lower is better)
Translates to: NNGQFCQHFQRK*SPRNDGMCSSL
Trigger: GAGACTCGAACACATTCCATCATTCCGAGGGGATCACTTTCTCTGAAAGTGTTGGCAGAATTGCCCATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GTGCTGTCTGGGAACTTTCCAATGAAGAAACCCTTCTaGCCGGGAACATTTAATGACACTTGTGAATTCAGA +
Preference number: 6 (lower is better)
Translates to: VLSGNFPMKKPF*PGTFNDTCEFR
Trigger: TCTGAATTCACAAGTGTCATTAAATGTTCCCGGCCAGAAGGGTTTCTTCATTGGAAAGTTCCCAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 72 bp AGACATACATTTAGGCTAATGTGGCCATCAGCAAGTTaGACACAGCTAGCTAGGTACCTGGTTACGTCATCA +
Preference number: 6 (lower is better)
Translates to: RHTFRLMWPSAS*TQLARYLVTSS
Trigger: TGATGACGTAACCAGGTACCTAGCTAGCTGTGTCAAACTTGCTGATGGCCACATTAGCCTAAATGTATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468960.3
ENST00000482799.3
CDS CAA 90 bp TTCGTAAAGGTACGAGTGACGGAAGGCTTTTATAACAGGGCAGCTTaGTTAAAGCTGAATCTTCAGCCTCACACAAATTCAACAGCTCTG +
Preference number: 6 (lower is better)
Translates to: FVKVRVTEGFYNRAA*LKLNLQPHTNSTAL
Trigger: CAGAGCTGTTGAATTTGTGTGAGGCTGAAGATTCAGCTTTAACAAAGCTGCCCTGTTATAAAAGCCTTCCGTCACTCGTACCTTTACGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS TCA 72 bp ATTTTTCCATACTGGATGATCGCTGAAGCTGATGCATaGACCCCAAGCATAGCGTTATTTGAACTGGGATCA +
Preference number: 6 (lower is better)
Translates to: IFPYWMIAEADA*TPSIALFELGS
Trigger: TGATCCCAGTTCAAATAACGCTATGCTTGGGGTTCATGCATCAGCTTCAGCGATCATCCAGTATGGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp CAACTTAGAAATAAGATTATGAAGCTTCATGGATCCTaGAACGCTGAAGTCAAAATCCGTCGTGAACTGGCC +
Preference number: 6 (lower is better)
Translates to: QLRNKIMKLHGS*NAEVKIRRELA
Trigger: GGCCAGTTCACGACGGATTTTGACTTCAGCGTTCCAGGATCCATGAAGCTTCATAATCTTATTTCTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CCA 72 bp GTTGCTGACTTTTGGTCTCATTCCTCCATACTCAGTTaGACAAACCTCTCTGTATCTTCCATTTTGGTAGAG +
Preference number: 6 (lower is better)
Translates to: VADFWSHSSILS*TNLSVSSILVE
Trigger: CTCTACCAAAATGGAAGATACAGAGAGGTTTGTCCAACTGAGTATGGAGGAATGAGACCAAAAGTCAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 72 bp GTACGAGTGACGGAAGGCTTTTATAACAGGGCAGCTTaGTTAAAGCTGAATCTTCAGCCTCACACAAATTCA +
Preference number: 6 (lower is better)
Translates to: VRVTEGFYNRAA*LKLNLQPHTNS
Trigger: TGAATTTGTGTGAGGCTGAAGATTCAGCTTTAACAAAGCTGCCCTGTTATAAAAGCCTTCCGTCACTCGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp ATCTCTTCCTCCATATACTCTTTTAAGAATGTCATGTaGCAGAGAAAACGACCAGTAAAGGCTCGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ISSSIYSFKNVM*QRKRPVKARSS
Trigger: GCTGCTCCGAGCCTTTACTGGTCGTTTTCTCTGCAACATGACATTCTTAAAAGAGTATATGGAGGAAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp ACTTTAGCTTTTAATTCATCTCCGAAGTTGGGGTCGTaGAAGTCTACAAAGCGAAAGAACAGGGCACGTTTC +
Preference number: 6 (lower is better)
Translates to: TLAFNSSPKLGS*KSTKRKNRARF
Trigger: GAAACGTGCCCTGTTCTTTCGCTTTGTAGACTTCAACGACCCCAACTTCGGAGATGAATTAAAAGCTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TGCTGCAGAACTTTAGCTTTTAATTCATCTCCGAAGTaGGGGTCGTTGAAGTCTACAAAGCGAAAGAACAGG +
Preference number: 6 (lower is better)
Translates to: CCRTLAFNSSPK*GSLKSTKRKNR
Trigger: CCTGTTCTTTCGCTTTGTAGACTTCAACGACCCCAACTTCGGAGATGAATTAAAAGCTAAAGTTCTGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp TTCAAGATATGCTGCAGAACTTTAGCTTTTAATTCATCTCCGAAGTaGGGGTCGTTGAAGTCTACAAAGCGAAAGAACAGGGCACGTTTC +
Preference number: 6 (lower is better)
Translates to: FKICCRTLAFNSSPK*GSLKSTKRKNRARF
Trigger: GAAACGTGCCCTGTTCTTTCGCTTTGTAGACTTCAACGACCCCAACTTCGGAGATGAATTAAAAGCTAAAGTTCTGCAGCATATCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GGACTTGTTGATCTGAGCCAAGAACATTCCCTTCAGTaGATAAAATTCGGCTGTCATCTCTTTTGTGAAGTA +
Preference number: 6 (lower is better)
Translates to: GLVDLSQEHSLQ*IKFGCHLFCEV
Trigger: TACTTCACAAAAGAGATGACAGCCGAATTTTATGCACTGAAGGGAATGTTCTTGGCTCAGATCAACAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TGCTGGTTTCTCCTGAAGAAACTGAACTTCTCCATCTaGGAGAAATGTAAGGAATCGAGGGATGATATGTTC +
Preference number: 6 (lower is better)
Translates to: CWFLLKKLNFSI*EKCKESRDDMF
Trigger: GAACATATCATCCCTCGATTCCTTACATTTCTCCAAGATGGAGAAGTTCAGTTTCTTCAGGAGAAACCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TATCCTGAGCCAATTAGTATGGATTCATCAAACAGCTaGTCCATGCAAGGAATGAACTGGTTTCTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: YPEPISMDSSNS*SMQGMNWFLSS
Trigger: AGAGCTGAGAAACCAGTTCATTCCTTGCATGGACAAGCTGTTTGATGAATCCATACTAATTGGCTCAGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp ACATCAAATATCACAGCTAGGGCCACCTCCCCGATTTaGCAAAGCTCCTTTTCTTCATATGCCATACAAATA +
Preference number: 6 (lower is better)
Translates to: TSNITARATSPI*QSSFSSYAIQI
Trigger: TATTTGTATGGCATATGAAGAAAAGGAGCTTTGCAAAATCGGGGAGGTGGCCCTAGCTGTGATATTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 72 bp TGTCACCGTACTAATCCTACTCCTTTTACTGAAATTTaGCTCTCAATGAGCAGGTGTAGAAATCTCTTGGCG +
Preference number: 6 (lower is better)
Translates to: CHRTNPTPFTEI*LSMSRCRNLLA
Trigger: CGCCAAGAGATTTCTACACCTGCTCATTGAGAGCAAAATTTCAGTAAAAGGAGTAGGATTAGTACGGTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CAA 90 bp ATACTTGCAACATCAAATATCACAGCTAGGGCCACCTCCCCGATTTaGCAAAGCTCCTTTTCTTCATATGCCATACAAATAGCAATTGCA +
Preference number: 6 (lower is better)
Translates to: ILATSNITARATSPI*QSSFSSYAIQIAIA
Trigger: TGCAATTGCTATTTGTATGGCATATGAAGAAAAGGAGCTTTGCAAAATCGGGGAGGTGGCCCTAGCTGTGATATTTGATGTTGCAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS CAA 90 bp ATGCCACTTTGTCACCGTACTAATCCTACTCCTTTTACTGAAATTTaGCTCTCAATGAGCAGGTGTAGAAATCTCTTGGCGGTAAAAATG +
Preference number: 6 (lower is better)
Translates to: MPLCHRTNPTPFTEI*LSMSRCRNLLAVKM
Trigger: CATTTTTACCGCCAAGAGATTTCTACACCTGCTCATTGAGAGCAAAATTTCAGTAAAAGGAGTAGGATTAGTACGGTGACAAAGTGGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS TCA 72 bp TGGAAGCAATCCACGATAGGAACAGTTGGAATAGTATaGATCCGACTTAATATATCCAGAGCTACATTGACC +
Preference number: 6 (lower is better)
Translates to: WKQSTIGTVGIV*IRLNISRATLT
Trigger: GGTCAATGTAGCTCTGGATATATTAAGTCGGATTCATACTATTCCAACTGTTCCTATCGTGGATTGCTTCCA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000360902.2
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp ACTGAAGCCCTATGTTGTTGCTACCCTTTTCTTACTTaGAGCCTACATAAAATTTACCGAGATGGCAGTATT +
Preference number: 6 (lower is better)
Translates to: TEALCCCYPFLT*SLHKIYRDGSI
Trigger: AATACTGCCATCTCGGTAAATTTTATGTAGGCTGCAAGTAAGAAAAGGGTAGCAACAACATAGGGCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS CCA 72 bp TTCATTCTAACTGCCAAGGTGCATCTGATGATGCTTTaGTTCATCTCATGGGTGCGTAATAGATGCATAATA +
Preference number: 6 (lower is better)
Translates to: FILTAKVHLMML*FISWVRNRCII
Trigger: TATTATGCATCTATTACGCACCCATGAGATGAACCAAAGCATCATCAGATGCACCTTGGCAGTTAGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS GCA 72 bp AAATTAGCTGTGAAGAGCACTGAAGCCCTATGTTGTTaGTACCCTTTTCTTACTTGCAGCCTACATAAAATT +
Preference number: 6 (lower is better)
Translates to: KLAVKSTEALCC*YPFLTCSLHKI
Trigger: AATTTTATGTAGGCTGCAAGTAAGAAAAGGGTAGCAACAACATAGGGCTTCAGTGCTCTTCACAGCTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468960.3
CDS TCA 72 bp AATCGAGGGATGATATGTTCTAGGAATGTAGAATACTaGGGAGATGACGTGACATTCTCAAAATTTTCACTA +
Preference number: 6 (lower is better)
Translates to: NRGMICSRNVEY*GDDVTFSKFSL
Trigger: TAGTGAAAATTTTGAGAATGTCACGTCATCTCCTCAGTATTCTACATTCCTAGAACATATCATCCCTCGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355540.7
ENST00000359863.8
ENST00000417523.5
ENST00000446306.7
ENST00000456197.2
ENST00000628380.2
CDS GCA 72 bp GTGTTAATTAGAAACACATCTTGGTCAGTAAAGCTGTaGTCCCTTCTGACTGTAGATTGTGTTGAAATTATT +
Preference number: 6 (lower is better)
Translates to: VLIRNTSWSVKL*SLLTVDCVEII
Trigger: AATAATTTCAACACAATCTACAGTCAGAAGGGAGCACAGCTTTACTGACCAAGATGTGTTTCTAATTAACAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468960.3