RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPV6 (Homo sapiens)

Ensembl gene IDs: ENSG00000165125, ENSG00000276971

Ensembl transcript IDs: ENST00000359396.9, ENST00000436401.1, ENST00000474388.1, ENST00000485138.5, ENST00000611485.2, ENST00000615386.4, ENST00000619250.1, ENST00000631384.1, ENST00000632149.1, ENST00000632330.1, ENST00000632381.1, ENST00000632455.1, ENST00000633318.1, ENST00000633826.1

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTaGCCCAGAGCTGAAGGAGTAATGCAGGCCTGGAGCAGTGATTCT +
Preference number: 1 (lower is better)
Translates to: SSSRPASPVLGLGFL*PRAEGVMQAWSSDS
Trigger: AGAATCACTGCTCCAGGCCTGCATTACTCCTTCAGCTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR GCA 90 bp TCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTaGCCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAG +
Preference number: 1 (lower is better)
Translates to: SHAFHKLCTSLHLPG*PGKGSLPTYDPGVE
Trigger: CTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR GCA 90 bp CAGAGCCGTTCCTGTCTCCCTCACTCACACGCTTTCCACAAGCTCTaGACTTCCCTGCACCTGCCTGGGTGCCCTGGGAAGGGCTCTCTC +
Preference number: 1 (lower is better)
Translates to: QSRSCLPHSHAFHKL*TSLHLPGCPGKGSL
Trigger: GAGAGAGCCCTTCCCAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGAGACAGGAACGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR GCA 90 bp GCGCCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTaGTCCTGTCGGAAGGGTGATGAGCAGGCCACAGGAGAGTTCCTC +
Preference number: 1 (lower is better)
Translates to: APKQAGLFLKCSDMQ*SCRKGDEQATGEFL
Trigger: GAGGAACTCTCCTGTGGCCTGCTCATCACCCTTCCGACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR CCA 90 bp GGGCTGGGCTTCCTCTGCCCCAGAGCTGAAGGAGTAATGCAGGCCTaGAGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACT +
Preference number: 1 (lower is better)
Translates to: GLGFLCPRAEGVMQA*SSDSQRTFLGVHAT
Trigger: AGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCCTTCAGCTCTGGGGCAGAGGAAGCCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR GCA 90 bp ACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGGCCCTGCCAGCCCCGTaGTTGGGCTGGGCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: THTLSTSSALPCTCLGALALPAP*LGWASS
Trigger: AGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGC...CAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR CCA 90 bp CTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCGCCCCGTGCTTGGGCTaGGCTTCCTCTGCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: LTHTLSTSSALPCTCLGAAPCLG*ASSAPE
Trigger: CTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGC...GGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR GCA 90 bp CCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCGAGTTCCTCACGCCCTaGCAGCCCCGTGCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: PHSHAFHKLCTSLHLPGCEFLTP*QPRAWA
Trigger: AGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTC...GCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR CCA 90 bp TCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCCGTGCTTGGGCTaGGCTTCCTCTGCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: SLTHTLSTSSALPCTCLGAPCLG*ASSAPE
Trigger: CTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGC...ACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR TCA 90 bp GCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTATGCACCCAGGAAAATaGGAGCAAGTTCCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: ATGEFLTPCQPRAWAGLPMHPGK*EQVPGS
Trigger: GCTTCCTGGAACTTGCTCTCATTTTCCTGGGTGCAT...AGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR TCA 90 bp GGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCGCAGGCCTGGAGCAGTaGTTCTCAACGTACATTCCT +
Preference number: 2 (lower is better)
Translates to: GKGSLPTYDPGVETERPSAGLEQ*FSTYIP
Trigger: AGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGC...GCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR GCA 90 bp CTCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGGGGCTGGGCTTCCTCTaGCCCAGAGCTGAAGGAGTA +
Preference number: 2 (lower is better)
Translates to: LPHSHAFHKLCTSLHLPGGLGFL*PRAEGV
Trigger: TACTCCTTCAGCTCTGGGGCAGAGGAAGCCCAGCCC...CCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR TCA 90 bp AGATGGAGTTGGCAAGACCTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCGCAGGCCTGGAGCAGTaGTTCTCAACGTACATTCCT +
Preference number: 2 (lower is better)
Translates to: RWSWQDLAPLPTPRAVPVAGLEQ*FSTYIP
Trigger: AGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGC...GACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAGGTCTTGCCAACTCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR GCA 90 bp CCTGTCGGAAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCATTCCTTGGCGTTCATaGTACTCCTCTTTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: PVGRVMSRPQESSSRPASIPWRS*YSSFSP
Trigger: AGGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAAT...GCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTTCCGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR GCA 90 bp GGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCAGGCCTGTTTTTAAAGTaGTCTGACATGCAGTGCTCC +
Preference number: 2 (lower is better)
Translates to: GRALSPLMTLGWRPSAQAGLFLK*SDMQCS
Trigger: GGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCC...TGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR CCA 90 bp GGTGCCCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCTCAACGTACATTCCTTaGCGTTCATGCTACTCCTCT +
Preference number: 2 (lower is better)
Translates to: GALGRALSPLMTLGWRPSSTYIP*RSCYSS
Trigger: AGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGA...GCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR CCA 90 bp AGATGGAGTTGGCAAGACCTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCAGCGCCCAAGCAGGCTaGCCTGTTTTTAAAGTGCTC +
Preference number: 2 (lower is better)
Translates to: RWSWQDLAPLPTPRAVPVSAQAG*PVFKVL
Trigger: GAGCACTTTAAAAACAGGCCAGCCTGCTTGGGCGCT...GACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAGGTCTTGCCAACTCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR CCA 90 bp CCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCGGAGTAATGCAGGCCTaGAGCAGTGATTCTCAACGT +
Preference number: 2 (lower is better)
Translates to: PHSHAFHKLCTSLHLPGCGVMQA*SSDSQR
Trigger: ACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCC...GCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR TCA 90 bp CCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTCGGATGCACCCAGGAAAATaGGAGCAAGTTCCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: PKQAGLFLKCSDMQCSCRMHPGK*EQVPGS
Trigger: GCTTCCTGGAACTTGCTCTCATTTTCCTGGGTGCAT...CCGACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR GCA 90 bp CCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTCGGATTCCTTGGCGTTCATaGTACTCCTCTTTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: PKQAGLFLKCSDMQCSCRIPWRS*YSSFSP
Trigger: AGGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAAT...CCGACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR GCA 72 bp CGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTaGCCCAGAGCTGAAGGAGTAATGCAGGCCTGGAGC +
Preference number: 3 (lower is better)
Translates to: RPASPVLGLGFL*PRAEGVMQAWS
Trigger: GCTCCAGGCCTGCATTACTCCTTCAGCTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR GCA 72 bp GGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTaGCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: GDEQATGEFLTP*QPRAWAGLPLP
Trigger: GGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR CAA 90 bp GCGCCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTCTGCCAGCCCCGTGCTaGGGCTGGGCTTCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: APKQAGLFLKCSDMQCSCLPAPC*GWASSA
Trigger: GGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAG...ACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR CCA 72 bp CTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTaGAGACCGAGCGCCCAAGCAGGCTGGCCTGTTTTT +
Preference number: 3 (lower is better)
Translates to: LGRALSPLMTLG*RPSAQAGWPVF
Trigger: AAAAACAGGCCAGCCTGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR CAA 90 bp ACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCTCAACGTACATTCCTaGGCGTTCATGCTACTCCTC +
Preference number: 3 (lower is better)
Translates to: TGEFLTPCQPRAWAGLPLLNVHS*AFMLLL
Trigger: GAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAG...CAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR CAA 90 bp CTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAACTCAACGTACATTCCTaGGCGTTCATGCTACTCCTC +
Preference number: 3 (lower is better)
Translates to: LGRALSPLMTLGWRPSAQLNVHS*AFMLLL
Trigger: GAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAG...TTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR CAA 90 bp CACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCCCAGAGCTGAAGTGTTTGGTTTTTGTTTaGTTTGATGCACCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: HALPAPCLGWASSAPELKCLVFV*FDAPRK
Trigger: TTTCCTGGGTGCATCAAACAAAACAAAAACCAAACA...CTTCAGCTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR-3UTR CAA 90 bp CAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCTGTTTGGTTTTTGTTTaGTTTGATGCACCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: QESSSRPASPVLGLGFLCCLVFV*FDAPRK
Trigger: TTTCCTGGGTGCATCAAACAAAACAAAAACCAAACA...GCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR GCA 72 bp CAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTaGTCCTGTCGGAAGGGTGATGAGCAGGCCACAGGA +
Preference number: 3 (lower is better)
Translates to: QAGLFLKCSDMQ*SCRKGDEQATG
Trigger: TCCTGTGGCCTGCTCATCACCCTTCCGACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
3UTR CCA 72 bp TTCCTCTGCCCCAGAGCTGAAGGAGTAATGCAGGCCTaGAGCAGTGATTCTCAACGTACATTCCTTGGCGTT +
Preference number: 3 (lower is better)
Translates to: FLCPRAEGVMQA*SSDSQRTFLGV
Trigger: AACGCCAAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCCTTCAGCTCTGGGGCAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTGTAGGGCCGGCTCCTTaGGGGCCTGAGGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: ATGEFLTPCQPRAWAGLPVGPAP*GPEAEA
Trigger: GGCCTCGGCCTCAGGCCCCCAAGGAGCCGGCCCTAC...AGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp CAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCGCCGAGGCCAGACCCTaGCGGGACTCAGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QESSSRPASPVLGLGFLCAEARP*RDSALG
Trigger: CCCCAAGGCTGAGTCCCGTCAGGGTCTGGCCTCGGC...GCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTGCCAGCCCCGTGCTTaGGCTGGGCTTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GHRRVPHALPAPCLGWASCQPRA*AGLPLP
Trigger: GGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCA...GGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp TCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCCCAGAGCTGAACTGCACCTGCCTGGGTaGCCTGGGAAGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRPASPVLGLGFLCPRAELHLPG*PGKGSL
Trigger: GAGAGAGCCCTTCCCAGGGCACCCAGGCAGGTGCAG...TTCAGCTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCCTGCACCTGCCTGGGTaGCCTGGGAAGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PQESSSRPASPVLGLGFLLHLPG*PGKGSL
Trigger: GAGAGAGCCCTTCCCAGGGCACCCAGGCAGGTGCAG...GAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCCTTCACCGGCGTCTaGTCCAGGATCTGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: GHRRVPHALPAPCLGWASSFTGV*SRIWRA
Trigger: GGCTCGCCAGATCCTGGACCAGACGCCGGTGAAGGA...GGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCCCGTGCTTGGGCTaGGCTTCCTCTGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: HRRVPHALPAPCLGWASSAPCLG*ASSAPE
Trigger: CTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGC...AGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGGCCCCGTGCTTGGGCTaGGCTTCCTCTGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VMSRPQESSSRPASPVLGAPCLG*ASSAPE
Trigger: CTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGC...CCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCATGCCAGCCCCGTGCTTaGGCTGGGCTTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGKGSLPTYDPGVETERPCQPRA*AGLPLP
Trigger: GGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCA...TGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp TCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCCCAGAGCTGAACCAGCATCACCGTGGTaGCCACAACCTGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SRPASPVLGLGFLCPRAEPASPW*PQPGPS
Trigger: GGAGGGCCCAGGTTGTGGCCACCACGGTGATGCTGG...TTCAGCTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611485.2
CDS-3UTR GCA 90 bp GTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGGAGTTCCTCACGCCCTaGCAGCCCCGTGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VMSRPQESSSRPASPVLGEFLTP*QPRAWA
Trigger: AGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTC...CCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCGTGGTGGCCACAACCTaGGCCCTCCACAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: QESSSRPASPVLGLGFLCVVATT*ALHSSS
Trigger: GGATGAGCTGTGGAGGGCCCAGGTTGTGGCCACCAC...GCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611485.2
CDS-3UTR TCA 90 bp GGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCGGACTGCTCATCCCCTaGGGAGTCGATCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GHRRVPHALPAPCLGWASGLLIP*GVDLCE
Trigger: CTCACAGAGATCGACTCCTCAGGGGATGAGCAGTCC...GGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp GGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCGGATCCGCTGCCGGTTaGGATCTTGCCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GHRRVPHALPAPCLGWASGSAAG*DLACLP
Trigger: TGGAAGACAGGCAAGATCTCAACCGGCAGCGGATCC...GGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp AGTTGGCAAGACCTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTCCCTCGCCCTGCCAGCCCCGTaGTTGGGCTGGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SWQDLAPLPTPRAVPVSLALPAP*LGWASS
Trigger: AGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGC...GAGGGAGACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAGGTCTTGCCAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp TCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCCCAGAGCTGAAGCGCTGTTTCCCCCATaGCTCCTCTCTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: SRPASPVLGLGFLCPRAEALFPP*LLSGAP
Trigger: AGGTGCACCAGAGAGGAGCCATGGGGGAAACAGCGC...TTCAGCTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCGTCTGGTCCAGGATCTaGCGAGCCTCCCGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PQESSSRPASPVLGLGFLVWSRI*RASRFL
Trigger: CAAGAAGCGGGAGGCTCGCCAGATCCTGGACCAGAC...GAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp GGGTGCCCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCTCGGGCGAAGTACATaGCGTTGCACCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GCPGKGSLPTYDPGVETELGRST*RCTSPA
Trigger: TGCTGGGCTGGTGCAACGTCATGTACTTCGCCCGAG...CTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp GTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGTGCTGCAGCAGGTTCTaGTCATCTCGGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VMSRPQESSSRPASPVLGCCSRF*SSRLWA
Trigger: GGCCCAGAGCCGAGATGAGCAGAACCTGCTGCAGCA...CCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCAGTTCCAGCAGGGACTaGTCATCCCCTGAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: QESSSRPASPVLGLGFLCSSSRD*SSPEES
Trigger: CGACTCCTCAGGGGATGAGCAGTCCCTGCTGGAACT...GCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAGGTGTGGAAGGCCTGTaGGTAGCGTTGGATCCGCTG +
Preference number: 4 (lower is better)
Translates to: PGKGSLPTYDPGVETERPGVEGL*VALDPL
Trigger: CAGCGGATCCAACGCTACGCACAGGCCTTCCACACC...TGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp GGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCGGTGTGGAAGGCCTGTaGGTAGCGTTGGATCCGCTG +
Preference number: 4 (lower is better)
Translates to: GKGSLPTYDPGVETERPSGVEGL*VALDPL
Trigger: CAGCGGATCCAACGCTACGCACAGGCCTTCCACACC...GCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGGCCCTGCCAGCCCCGTaGTTGGGCTGGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPHSHAFHKLCTSLHLPGALPAP*LGWASS
Trigger: AGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGC...CCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAAGCTCTGCACTTCCCTaGACCTGCCTGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGRALSPLMTLGWRPSAQSSALP*TCLGAL
Trigger: CAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCT...TTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp AAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTAGCTCTGCACTTCCCTaGACCTGCCTGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KGDEQATGEFLTPCQPRASSALP*TCLGAL
Trigger: CAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCT...AGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GGTGCCCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCGCTGTTTCCCCCATaGCTCCTCTCTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: GALGRALSPLMTLGWRPSALFPP*LLSGAP
Trigger: AGGTGCACCAGAGAGGAGCCATGGGGGAAACAGCGC...GCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGGGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCACCTCCAGACCCCTGTTaGTTATCCCACGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGKGSLPTYDPGVETERPPPDPC*LSHAGL
Trigger: GAGACCTGCGTGGGATAATCAACAGGGGTCTGGAGG...TGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp TCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCAGGCTGGCCTGTTTGCTGCAGCAGGTTCTaGTCATCTCGGCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SPLMTLGWRPSAQAGWPVCCSRF*SSRLWA
Trigger: GGCCCAGAGCCGAGATGAGCAGAACCTGCTGCAGCA...AACAGGCCAGCCTGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp AGTTGGCAAGACCTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTCCCTCTGCTCATCTCGGCTCTaGGCCCAGGACTCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SWQDLAPLPTPRAVPVSLCSSRL*AQDSRL
Trigger: GAGACGGGAGTCCTGGGCCCAGAGCCGAGATGAGCA...GAGGGAGACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAGGTCTTGCCAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCAAGGGGCCTAGCATCTaGAATCCTCGGGCGAAGTAC +
Preference number: 4 (lower is better)
Translates to: PQESSSRPASPVLGLGFLKGPSI*NPRAKY
Trigger: GTACTTCGCCCGAGGATTCCAGATGCTAGGCCCCTT...GAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp AGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGACTGCTCATCCCCTaGGGAGTCGATCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: RVMSRPQESSSRPASPVLGLLIP*GVDLCE
Trigger: CTCACAGAGATCGACTCCTCAGGGGATGAGCAGTCC...AAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp TCCTGTCGGAAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCTCGGGCGAAGTACATaGCGTTGCACCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SCRKGDEQATGEFLTPCQLGRST*RCTSPA
Trigger: TGCTGGGCTGGTGCAACGTCATGTACTTCGCCCGAG...CTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTTCCGACAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp TCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCAGGCTGGCCTGTTGGATCCGCTGCCGGTTaGGATCTTGCCTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPLMTLGWRPSAQAGWPVGSAAG*DLACLP
Trigger: TGGAAGACAGGCAAGATCTCAACCGGCAGCGGATCC...AACAGGCCAGCCTGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp CCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCGCAGGCCTGGAGCAGTaGTTCTCAACGTACATTCCT +
Preference number: 4 (lower is better)
Translates to: PQESSSRPASPVLGLGFLAGLEQ*FSTYIP
Trigger: AGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGC...GAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp GGGTGCCCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCCGTCTCCTGTCTCCTaGCTTCCTGACGAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: GCPGKGSLPTYDPGVETEPSPVS*LPDEFL
Trigger: AAGGAACTCGTCAGGAAGGCAGGAGACAGGAGACGG...CTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp GGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCAATATGGCACCCAGCATaGAGAAGTACGGCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: GRALSPLMTLGWRPSAQAIWHPA*RSTAAR
Trigger: ACGGGCGGCCGTACTTCTGCATGCTGGGTGCCATAT...TGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp GGTGCCCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCCTCCTCAGGGTCCCTTaGCGAAGCCTTTCCCAATTG +
Preference number: 4 (lower is better)
Translates to: GALGRALSPLMTLGWRPSLLRVP*RSLSQL
Trigger: CAATTGGGAAAGGCTTCGGCAAGGGACCCTGAGGAG...GCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp AGTTGGCAAGACCTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTCCCTCGGGCTGGGCTTCCTCTaGCCCAGAGCTGAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SWQDLAPLPTPRAVPVSLGLGFL*PRAEGV
Trigger: TACTCCTTCAGCTCTGGGGCAGAGGAAGCCCAGCCC...GAGGGAGACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAGGTCTTGCCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGGGCAGTGACAAACCCATaGGGTGTAGGGCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LTRFPQALHFPAPAWVPWAVTNP*GVGPAP
Trigger: AGGAGCCGGCCCTACACCCCATGGGTTTGTCACTGC...CCAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTCCCTCACTCACACGCTTGCAGTGACAAACCCATaGGGTGTAGGGCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LAPLPTPRAVPVSLTHTLAVTNP*GVGPAP
Trigger: AGGAGCCGGCCCTACACCCCATGGGTTTGTCACTGC...AAGCGTGTGAGTGAGGGAGACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp AGATGGAGTTGGCAAGACCTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTGCTCATCTCGGCTCTaGGCCCAGGACTCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: RWSWQDLAPLPTPRAVPVCSSRL*AQDSRL
Trigger: GAGACGGGAGTCCTGGGCCCAGAGCCGAGATGAGCA...GACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAGGTCTTGCCAACTCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTCCCTCACTCACACGCTTGTGGTGGCCACAATCTaGGCCCTCCACAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LAPLPTPRAVPVSLTHTLVVATI*ALHSSS
Trigger: GGATGAGCTGTGGAGGGCCCAGATTGTGGCCACCAC...AAGCGTGTGAGTGAGGGAGACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359396.9
CDS-3UTR TCA 90 bp TCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCCCAGAGCTGAAGTTTGGAGAGGGCTGTaGGTTTGTTACACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SRPASPVLGLGFLCPRAEVWRGL*VCYTWQ
Trigger: CTGCCAAGTGTAACAAACTCACAGCCCTCTCCAAAC...TTCAGCTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CCTGTCGGAAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCGTCTCCTGTCTCCTaGCTTCCTGACGAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PVGRVMSRPQESSSRPASPSPVS*LPDEFL
Trigger: AAGGAACTCGTCAGGAAGGCAGGAGACAGGAGACGG...GCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTTCCGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCAGATCCTCTTCTGCTaGAGCAGGTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: QESSSRPASPVLGLGFLCQILFC*SRFCSS
Trigger: AGATGAGCAGAACCTGCTGCAGCAGAAGAGGATCTG...GCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGGATATGGCACCCAGCATaGAGAAGTACGGCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: LTRFPQALHFPAPAWVPWIWHPA*RSTAAR
Trigger: ACGGGCGGCCGTACTTCTGCATGCTGGGTGCCATAT...CCAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTCCCTCACTCACACGCTTTGCCGGTTGAGATCTTaGCTGTCTTCCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LAPLPTPRAVPVSLTHTLCRLRS*LSSTRR
Trigger: CCTGCGGGTGGAAGACAGGCAAGATCTCAACCGGCA...AAGCGTGTGAGTGAGGGAGACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAACTCCTCAGGGTCCCTTaGCGAAGCCTTTCCCAATTG +
Preference number: 4 (lower is better)
Translates to: LGRALSPLMTLGWRPSAQLLRVP*RSLSQL
Trigger: CAATTGGGAAAGGCTTCGGCAAGGGACCCTGAGGAG...TTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCGGGCTGGGCTTCCTCTaGCCCAGAGCTGAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LTHTLSTSSALPCTCLGAGLGFL*PRAEGV
Trigger: TACTCCTTCAGCTCTGGGGCAGAGGAAGCCCAGCCC...GGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCGTCTGGTCCAGGATCTaGCGAGCCTCCCGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LTHTLSTSSALPCTCLGAVWSRI*RASRFL
Trigger: CAAGAAGCGGGAGGCTCGCCAGATCCTGGACCAGAC...GGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp TCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTTCCTTCACCGGCGTCTaGTCCAGGATCTGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: SLTHTLSTSSALPCTCLGSFTGV*SRIWRA
Trigger: GGCTCGCCAGATCCTGGACCAGACGCCGGTGAAGGA...ACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp ACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGCTTATGACCCTGGGGTaGAGACCGAGCGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: THTLSTSSALPCTCLGALLMTLG*RPSAQA
Trigger: TGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAG...CAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCTTATGACCCTGGGGTaGAGACCGAGCGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: PHSHAFHKLCTSLHLPGCLMTLG*RPSAQA
Trigger: TGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAG...GCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp GGTGCCCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGTCTCTGGAACCATCTaGAGAACTTGCTCCATAGGC +
Preference number: 4 (lower is better)
Translates to: GALGRALSPLMTLGWRPSVSGTI*RTCSIG
Trigger: GCCTATGGAGCAAGTTCTGCAGATGGTTCCAGAGAC...GCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp TCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCAGGCTGGCCTGTTTCCCAGATCCTCTTCTaGTGCAGCAGGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SPLMTLGWRPSAQAGWPVSQILF*CSRFCS
Trigger: TGAGCAGAACCTGCTGCAGCAGAAGAGGATCTGGGA...AACAGGCCAGCCTGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAATGGCTCCTCTCTGGTaGACCTTGCAATCCTCATAC +
Preference number: 4 (lower is better)
Translates to: PGKGSLPTYDPGVETERPMAPLW*TLQSSY
Trigger: GTATGAGGATTGCAAGGTGCACCAGAGAGGAGCCAT...TGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGAGTTCCAGCAGGGACTaGTCATCCCCTGAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LPHSHAFHKLCTSLHLPGSSSRD*SSPEES
Trigger: CGACTCCTCAGGGGATGAGCAGTCCCTGCTGGAACT...CCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGGCCCAATTGGCACTGCTaGGGGAGGTACTTCGAGACA +
Preference number: 4 (lower is better)
Translates to: LTRFPQALHFPAPAWVPWPNWHC*GRYFET
Trigger: TGTCTCGAAGTACCTCCCGCAGCAGTGCCAATTGGG...CCAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp TCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCCCAGAGCTGAAATTCCTTGGCGTTCATaGTACTCCTCTTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SRPASPVLGLGFLCPRAEIPWRS*YSSFSP
Trigger: AGGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAAT...TTCAGCTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCCGTAGGGCCGGCTCCTTaGGGGCCTGAGGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: AVILNVHSLAFMLLLFLPVGPAP*GPEAEA
Trigger: GGCCTCGGCCTCAGGCCCCCAAGGAGCCGGCCCTAC...GGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGGCCCATGGCTCCTCTCTaGTGCACCTTGCAATCCTCA +
Preference number: 4 (lower is better)
Translates to: LTRFPQALHFPAPAWVPWPMAPL*CTLQSS
Trigger: TGAGGATTGCAAGGTGCACCAGAGAGGAGCCATGGG...CCAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp TCCTGTCGGAAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCATGGCTCCTCTCTaGTGCACCTTGCAATCCTCA +
Preference number: 4 (lower is better)
Translates to: SCRKGDEQATGEFLTPCQPMAPL*CTLQSS
Trigger: TGAGGATTGCAAGGTGCACCAGAGAGGAGCCATGGG...CTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTTCCGACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCAGTGATGATGAGGACATaGAATGGGCCCCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: GRALSPLMTLGWRPSAQAVMMRT*NGPPRM
Trigger: CATCCTTGGGGGCCCATTCCATGTCCTCATCATCAC...TGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp ACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCACGTTGTAGTTGGCTaGGCCATCGATGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: TGEFLTPCQPRAWAGLPLHVVVG*AIDDGK
Trigger: CTTACCATCATCGATGGCCCAGCCAACTACAACGTG...CAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGGGAGTAATGCAGGCCTaGAGCAGTGATTCTCAACGT +
Preference number: 4 (lower is better)
Translates to: VMSRPQESSSRPASPVLGGVMQA*SSDSQR
Trigger: ACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCC...CCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGGAGTAATGCAGGCCTaGAGCAGTGATTCTCAACGT +
Preference number: 4 (lower is better)
Translates to: HRRVPHALPAPCLGWASSGVMQA*SSDSQR
Trigger: ACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCC...AGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCCCAATTGGCACTGCTaGGGGAGGTACTTCGAGACA +
Preference number: 4 (lower is better)
Translates to: LTHTLSTSSALPCTCLGAPNWHC*GRYFET
Trigger: TGTCTCGAAGTACCTCCCGCAGCAGTGCCAATTGGG...GGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp TGCCCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCATTCCTTGGCGTTCATaGTACTCCTCTTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: CPGKGSLPTYDPGVETERIPWRS*YSSFSP
Trigger: AGGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAAT...GCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp AAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTTAGCCCTTTCTCCTTaGGCAGTGACAAACCCATGG +
Preference number: 4 (lower is better)
Translates to: KGDEQATGEFLTPCQPRALALSP*AVTNPW
Trigger: CCATGGGTTTGTCACTGCCCAAGGAGAAAGGGCTAA...AGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCCATTCTGAAGATGTCTaGAACCTCTACCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PQESSSRPASPVLGLGFLHSEDV*NLYQQD
Trigger: ATCCTGCTGGTAGAGGTTCCAGACATCTTCAGAATG...GAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp AGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTCACGTTGTAGTTGGCTaGGCCATCGATGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: RVMSRPQESSSRPASPVLHVVVG*AIDDGK
Trigger: CTTACCATCATCGATGGCCCAGCCAACTACAACGTG...AAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTCAACGTACATTCCTTaGCGTTCATGCTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: PQESSSRPASPVLGLGFLSTYIP*RSCYSS
Trigger: AGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGA...GAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp GGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCATTCTGCATCAGGTGCTaGAACATCACAGTGTTACCC +
Preference number: 4 (lower is better)
Translates to: GRALSPLMTLGWRPSAQAFCIRC*NITVLP
Trigger: GGGTAACACTGTGATGTTTCAGCACCTGATGCAGAA...TGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp AGTTGGCAAGACCTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTCCCTCTTCCAGGAAGCGAAGTaGGAACACGCAGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: SWQDLAPLPTPRAVPVSLFQEAK*EHAVRS
Trigger: AGATCTGACTGCGTGTTCTCACTTCGCTTCCTGGAA...GAGGGAGACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAGGTCTTGCCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp CTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTCCCTCACTCACACGCTTATGCACCCAGGAAAATaGGAGCAAGTTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LAPLPTPRAVPVSLTHTLMHPGK*EQVPGS
Trigger: GCTTCCTGGAACTTGCTCTCATTTTCCTGGGTGCAT...AAGCGTGTGAGTGAGGGAGACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp AGTTGGCAAGACCTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTCCCTCATGCACCCAGGAAAATaGGAGCAAGTTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SWQDLAPLPTPRAVPVSLMHPGK*EQVPGS
Trigger: GCTTCCTGGAACTTGCTCTCATTTTCCTGGGTGCAT...GAGGGAGACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAGGTCTTGCCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp CAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCGAAAACGACTTTATTaGAGATGGAGTTGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: QESSSRPASPVLGLGFLCRKRLY*RWSWQD
Trigger: GTCTTGCCAACTCCATCTTCAATAAAGTCGTTTTCG...GCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCTCTGACATGCAGTaGTCCTGTCGGAAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LPHSHAFHKLCTSLHLPGCSDMQ*SCRKGD
Trigger: ATCACCCTTCCGACAGGAGCACTGCATGTCAGAGCA...CCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp AAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTGGCCTGTTTTTAAAGTaGTCTGACATGCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KGDEQATGEFLTPCQPRAGLFLK*SDMQCS
Trigger: GGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCC...AGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGGGACATCATTATCTTTaGCAGCTAGAAGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VMSRPQESSSRPASPVLGGHHYL*QLEGEE
Trigger: CTCCTCTCCTTCTAGCTGCCAAAGATAATGATGTCC...CCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CTCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGGTGATGATGAGGACATaGAATGGGCCCCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: LPHSHAFHKLCTSLHLPGVMMRT*NGPPRM
Trigger: CATCCTTGGGGGCCCATTCCATGTCCTCATCATCAC...CCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp CTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGGGATGATATAGAAGGCTaGAGCAAAGCCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: LTRFPQALHFPAPAWVPWDDIEG*SKAQDD
Trigger: GTCATCCTGGGCTTTGCTTCAGCCTTCTATATCATC...CCAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp ACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGACCATCTGCAGAACTTaGTCCATAGGCAGAGAATTA +
Preference number: 4 (lower is better)
Translates to: TGEFLTPCQPRAWAGLPLTICRT*SIGREL
Trigger: TAATTCTCTGCCTATGGAGCAAGTTCTGCAGATGGT...CAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGCAGATCCTCTTCTGCTaGAGCAGGTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LPHSHAFHKLCTSLHLPGQILFC*SRFCSS
Trigger: AGATGAGCAGAACCTGCTGCAGCAGAAGAGGATCTG...CCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp GTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCCTGGGAGTTCCTCACGCCCTaGCAGCCCCGTGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VILNVHSLAFMLLLFLPWEFLTP*QPRAWA
Trigger: AGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTC...CCAGGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp TCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCAGGCTGGCCTGTTTGTACAGCAGATATATaGCACCCAGCATGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SPLMTLGWRPSAQAGWPVCTADI*HPACRS
Trigger: ACTTCTGCATGCTGGGTGCCATATATCTGCTGTACA...AACAGGCCAGCCTGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp TCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTAGCGCCCAAGCAGGCTaGCCTGTTTTTAAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLTHTLSTSSALPCTCLGSAQAG*PVFKVL
Trigger: GAGCACTTTAAAAACAGGCCAGCCTGCTTGGGCGCT...ACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp TCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGTTTGGAGAGGGCTGTaGGTTTGTTACACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLTHTLSTSSALPCTCLGVWRGL*VCYTWQ
Trigger: CTGCCAAGTGTAACAAACTCACAGCCCTCTCCAAAC...ACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp CCTGTCGGAAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCAAAAATCATCTTCTaGATCATGATGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PVGRVMSRPQESSSRPASPKIIF*IMMVKG
Trigger: CCCCTTCACCATCATGATTCAGAAGATGATTTTTGG...GCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTTCCGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp CTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCGTTTTTAAAGTGCTCTaGCATGCAGTGCTCCTGTCG +
Preference number: 4 (lower is better)
Translates to: LTHTLSTSSALPCTCLGAVFKVL*HAVLLS
Trigger: CGACAGGAGCACTGCATGTCAGAGCACTTTAAAAAC...GGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGGGCCTGTTTTTAAAGTaGTCTGACATGCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPHSHAFHKLCTSLHLPGGLFLK*SDMQCS
Trigger: GGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCC...CCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGGTGTACAGCAGATATATaGCACCCAGCATGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LTRFPQALHFPAPAWVPWCTADI*HPACRS
Trigger: ACTTCTGCATGCTGGGTGCCATATATCTGCTGTACA...CCAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GCGCCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTGATGAGGACATGGAATaGGCCCCCAAGGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: APKQAGLFLKCSDMQCSCDEDME*APKDGL
Trigger: CAGACCATCCTTGGGGGCCCATTCCATGTCCTCATC...ACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CTGCTATGTGTAGCGCTGTTTCCCCCATGGCTCCTGGCATTTACAGAGAGGTGGTTCCCCCATGGCTCCTaGCATTTACAGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLCVALFPPWLLAFTERWFPHGS*HLQRGG
Trigger: CCCACCTCTCTGTAAATGCCAGGAGCCATGGGGGAA...CCACCTCTCTGTAAATGCCAGGAGCCATGGGGGAAACAGCGCTACACATAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633826.1
CDS-3UTR CCA 90 bp CTGCTATGTGTAGCGCTGTTTCCCCCATGGCTCCTGGCATTTACAGAGAGGTGGGCGCTGTTTCCCCCATaGCTCCTGGCATTTACAGAG +
Preference number: 4 (lower is better)
Translates to: LLCVALFPPWLLAFTERWALFPP*LLAFTE
Trigger: CTCTGTAAATGCCAGGAGCCATGGGGGAAACAGCGC...CCACCTCTCTGTAAATGCCAGGAGCCATGGGGGAAACAGCGCTACACATAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000633826.1
3UTR CAA 72 bp TGCAGGCCTGGAGCAGTGATTCTCAACGTACATTCCTaGGCGTTCATGCTACTCCTCTTTCTCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CRPGAVILNVHS*AFMLLLFLPWG
Trigger: GCCCCAGGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp CTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGGCCAAAAATCATCTTCTaGATCATGATGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LTRFPQALHFPAPAWVPWPKIIF*IMMVKG
Trigger: CCCCTTCACCATCATGATTCAGAAGATGATTTTTGG...CCAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp CCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTCGGGCAGGCCTGGAGCAGTaGTTCTCAACGTACATTCCT +
Preference number: 4 (lower is better)
Translates to: PKQAGLFLKCSDMQCSCRAGLEQ*FSTYIP
Trigger: AGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGC...CCGACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp AGATGGAGTTGGCAAGACCTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCGGACATCATTATCTTTaGCAGCTAGAAGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RWSWQDLAPLPTPRAVPVGHHYL*QLEGEE
Trigger: CTCCTCTCCTTCTAGCTGCCAAAGATAATGATGTCC...GACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAGGTCTTGCCAACTCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp GCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCCCCTCCAGACCCCTGTTaGTTATCCCACGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AVILNVHSLAFMLLLFLPPPDPC*LSHAGL
Trigger: GAGACCTGCGTGGGATAATCAACAGGGGTCTGGAGG...GGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTCGGATGGCTCCTCTCTGGTaGACCTTGCAATCCTCATAC +
Preference number: 4 (lower is better)
Translates to: PKQAGLFLKCSDMQCSCRMAPLW*TLQSSY
Trigger: GTATGAGGATTGCAAGGTGCACCAGAGAGGAGCCAT...CCGACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CTGCTATGTGTAGCGCTGTTTCCCCCATGGCTCCTGGCATTTACAGAGAGGTGGGAGAGGTGGGTTATATaGCTTCTCTCTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: LLCVALFPPWLLAFTERWERWVI*LLSGAP
Trigger: AGGTGCACCAGAGAGAAGCCATATAACCCACCTCTC...CCACCTCTCTGTAAATGCCAGGAGCCATGGGGGAAACAGCGCTACACATAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633826.1
CDS-3UTR TCA 90 bp GGAGTAATGCAGGCCTGGAGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATTGTCTCCTGCCTTCCTaGCGAGTTCCTTGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GVMQAWSSDSQRTFLGVHCLLPS*RVPWES
Trigger: AGACTCCCAAGGAACTCGTCAGGAAGGCAGGAGACA...ATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp CTGCTATGTGTAGCGCTGTTTCCCCCATGGCTCCTGGCATTTACAGAGAGGTGGATGGCTTCTCTCTGGTaGACCTTGCAATCCTCATAC +
Preference number: 4 (lower is better)
Translates to: LLCVALFPPWLLAFTERWMASLW*TLQSSY
Trigger: GTATGAGGATTGCAAGGTGCACCAGAGAGAAGCCAT...CCACCTCTCTGTAAATGCCAGGAGCCATGGGGGAAACAGCGCTACACATAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633826.1
CDS-3UTR GCA 90 bp TGGAGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTTGCCGGTTGAGATCTTaGCTGTCTTCCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: WSSDSQRTFLGVHATPLSCRLRS*LSSTRR
Trigger: CCTGCGGGTGGAAGACAGGCAAGATCTCAACCGGCA...AGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp AGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCGATGAGGACATGGAATaGGCCCCCAAGGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSDSQRTFLGVHATPLSPDEDME*APKDGL
Trigger: CAGACCATCCTTGGGGGCCCATTCCATGTCCTCATC...GGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp AGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCAAGGGGCCTAGCATCTaGAATCCTCGGGCGAAGTAC +
Preference number: 4 (lower is better)
Translates to: SSDSQRTFLGVHATPLSPKGPSI*NPRAKY
Trigger: GTACTTCGCCCGAGGATTCCAGATGCTAGGCCCCTT...GGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp CTGCTATGTGTAGCGCTGTTTCCCCCATGGCTCCTGGCATTTACAGAGAGGTGGTATATGGCTTCTCTCTaGTGCACCTTGCAATCCTCA +
Preference number: 4 (lower is better)
Translates to: LLCVALFPPWLLAFTERWYMASL*CTLQSS
Trigger: TGAGGATTGCAAGGTGCACCAGAGAGAAGCCATATA...CCACCTCTCTGTAAATGCCAGGAGCCATGGGGGAAACAGCGCTACACATAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633826.1
CDS-3UTR TCA 90 bp TGGAGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTTGTCTCCTGCCTTCCTaGCGAGTTCCTTGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: WSSDSQRTFLGVHATPLSCLLPS*RVPWES
Trigger: AGACTCCCAAGGAACTCGTCAGGAAGGCAGGAGACA...AGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp GGAGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCTCCCAGATCCTCTTCTaGTGCAGCAGGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GAVILNVHSLAFMLLLFLSQILF*CSRFCS
Trigger: TGAGCAGAACCTGCTGCAGCAGAAGAGGATCTGGGA...GAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp GGAGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCTTTCCCAATTGGCACTaGTGCGGGAGGTACTTCGAG +
Preference number: 4 (lower is better)
Translates to: GAVILNVHSLAFMLLLFLFPNWH*CGRYFE
Trigger: CTCGAAGTACCTCCCGCAGCAGTGCCAATTGGGAAA...GAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp AGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCTGCTCTGACATGCAGTaGTCCTGTCGGAAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: SSDSQRTFLGVHATPLSPCSDMQ*SCRKGD
Trigger: ATCACCCTTCCGACAGGAGCACTGCATGTCAGAGCA...GGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp GTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCCTGGTTCTGCATCAGGTGCTaGAACATCACAGTGTTACCC +
Preference number: 4 (lower is better)
Translates to: VILNVHSLAFMLLLFLPWFCIRC*NITVLP
Trigger: GGGTAACACTGTGATGTTTCAGCACCTGATGCAGAA...CCAGGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp GTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCCTGGGTTTTTAAAGTGCTCTaGCATGCAGTGCTCCTGTCG +
Preference number: 4 (lower is better)
Translates to: VILNVHSLAFMLLLFLPWVFKVL*HAVLLS
Trigger: CGACAGGAGCACTGCATGTCAGAGCACTTTAAAAAC...CCAGGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp AGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCGATGATATAGAAGGCTaGAGCAAAGCCCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SSDSQRTFLGVHATPLSPDDIEG*SKAQDD
Trigger: GTCATCCTGGGCTTTGCTTCAGCCTTCTATATCATC...GGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp TGGAGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTTTCCAGGAAGCGAAGTaGGAACACGCAGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: WSSDSQRTFLGVHATPLSFQEAK*EHAVRS
Trigger: AGATCTGACTGCGTGTTCTCACTTCGCTTCCTGGAA...AGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR TCA 90 bp AAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTCGGAAGCGAAAACGACTTTATTaGAGATGGAGTTGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: KQAGLFLKCSDMQCSCRKRKRLY*RWSWQD
Trigger: GTCTTGCCAACTCCATCTTCAATAAAGTCGTTTTCG...CTTCCGACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp GCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCCTCAACGTACATTCCTTaGCGTTCATGCTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: AVILNVHSLAFMLLLFLPSTYIP*RSCYSS
Trigger: AGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGA...GGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CCA 90 bp AGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCCATTCTGAAGATGTCTaGAACCTCTACCAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSDSQRTFLGVHATPLSPHSEDV*NLYQQD
Trigger: ATCCTGCTGGTAGAGGTTCCAGACATCTTCAGAATG...GGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR GCA 90 bp AGAGCTGAAGGAGTAATGCAGGCCTGGAGCAGTGATTCTCAACGTACATTCCTTACCATCTGCAGAACTTaGTCCATAGGCAGAGAATTA +
Preference number: 4 (lower is better)
Translates to: RAEGVMQAWSSDSQRTFLTICRT*SIGREL
Trigger: TAATTCTCTGCCTATGGAGCAAGTTCTGCAGATGGT...AAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCCTTCAGCTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS GCA 90 bp GGGCCGGCCCACCGTCTCCCTGTAGAGGTCCCGTCTCCTGTCTCCTaGCTTCCTGACGAGTTCCTTGGGAGTCTCCCAGCAGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: GPAHRLPVEVPSPVS*LPDEFLGSLPAAPA
Trigger: GGCTGGGGCTGCTGGGAGACTCCCAAGGAACTCGTCAGGAAGGCAGGAGACAGGAGACGGGACCTCTACAGGGAGACGGTGGGCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp GCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTGGCCTGTGCGTAGCGTaGGATCCGCTGCCGGTTGAG +
Preference number: 5 (lower is better)
Translates to: ATGEFLTPCQPRAWAGLPGLCVA*DPLPVE
Trigger: CTCAACCGGCAGCGGATCCAACGCTACGCACAGGCC...AGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp AAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTCTGCCAGCCCCGTGCTaGGGCTGGGCTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: KGDEQATGEFLTPCQPRALPAPC*GWASSA
Trigger: GGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAG...AGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGGCCTGTGCGTAGCGTaGGATCCGCTGCCGGTTGAG +
Preference number: 5 (lower is better)
Translates to: HRRVPHALPAPCLGWASSGLCVA*DPLPVE
Trigger: CTCAACCGGCAGCGGATCCAACGCTACGCACAGGCC...AGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS TCA 90 bp CCCGGGTGTGGAAGGCCTGTGCGTAGCGTTGGATCCGCTGCCGGTTaGGATCTTGCCTGTCTTCCACCCGCAGGAACCAGCGGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: PGCGRPVRSVGSAAG*DLACLPPAGTSGPP
Trigger: TGGGGGACCGCTGGTTCCTGCGGGTGGAAGACAGGCAAGATCTCAACCGGCAGCGGATCCAACGCTACGCACAGGCCTTCCACACCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611485.2
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS-3UTR CAA 90 bp GCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCGGTTGAGATCTaGCCTGTCTTCCACCCGCAG +
Preference number: 5 (lower is better)
Translates to: ATGEFLTPCQPRAWAGLPLPVEI*PVFHPQ
Trigger: CTGCGGGTGGAAGACAGGCAAGATCTCAACCGGCAG...AGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS TCA 90 bp CCCGGGTGTGGAAGGCCTGTGCGTAGCGTTGGATCCGCTGCCGGTTaGGATCTTGCCTGTCTTCCACCCGCAGGAACCAGCGGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: PGCGRPVRSVGSAAG*DLACLPPAGTSGLP
Trigger: TGGGAGACCGCTGGTTCCTGCGGGTGGAAGACAGGCAAGATCTCAACCGGCAGCGGATCCAACGCTACGCACAGGCCTTCCACACCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000615386.4
CDS-3UTR CAA 90 bp GCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTTGGATCCGCTGCCGGTaGAGATCTTGCCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: ATGEFLTPCQPRAWAGLPWIRCR*RSCLSS
Trigger: GGAAGACAGGCAAGATCTCAACCGGCAGCGGATCCA...AGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp TCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTCTGCCAGCCCCGTGCTaGGGCTGGGCTTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SLTHTLSTSSALPCTCLGLPAPC*GWASSA
Trigger: GGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAG...ACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CCTGTCGGAAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCGCAGCCCCAGCCAGTTaGGAGAGGGCTGTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: PVGRVMSRPQESSSRPASAAPAS*ERAVSL
Trigger: CAAACTCACAGCCCTCTCCAAACTGGCTGGGGCTGC...GCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTTCCGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp AAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTGCAGCCCCAGCCAGTTaGGAGAGGGCTGTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: KGDEQATGEFLTPCQPRAAAPAS*ERAVSL
Trigger: CAAACTCACAGCCCTCTCCAAACTGGCTGGGGCTGC...AGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp GGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAGCATTCCTGACGAGTTCCTaGGGAGTCTCCCAGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GRALSPLMTLGWRPSAQAFLTSS*GVSQQP
Trigger: GGGCTGCTGGGAGACTCCCAAGGAACTCGTCAGGAA...TGCTTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCACGAAGCCTTTCCCAATaGGCACTGCTGCGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: PGKGSLPTYDPGVETERPRSLSQ*ALLREV
Trigger: TACCTCCCGCAGCAGTGCCAATTGGGAAAGGCTTCG...TGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp AGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTTGTTGTCCCGGGGGCTaGTGCGGTTATTGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RVMSRPQESSSRPASPVLCCPGG*CGYWSW
Trigger: CCAGGACCAATAACCGCACAAGCCCCCGGGACAACA...AAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611485.2
CDS TCA 90 bp CCACCGTCTCCCTGTAGAGGTCCCGTCTCCTGTCTCCTGCCTTCCTaGCGAGTTCCTTGGGAGTCTCCCAGCAGCCCCAGCCAGTTTGGA +
Preference number: 5 (lower is better)
Translates to: PPSPCRGPVSCLLPS*RVPWESPSSPSQFG
Trigger: TCCAAACTGGCTGGGGCTGCTGGGAGACTCCCAAGGAACTCGTCAGGAAGGCAGGAGACAGGAGACGGGACCTCTACAGGGAGACGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp GGGTGCCCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGAGCCTCCCGCTTCTaGGTGGTGATGATAAGTTCC +
Preference number: 5 (lower is better)
Translates to: GCPGKGSLPTYDPGVETERASRF*VVMISS
Trigger: GGAACTTATCATCACCACCAAGAAGCGGGAGGCTCG...CTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp ACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGGTGAGTTTGTTACACTaGGCAGAGCCAGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: TGEFLTPCQPRAWAGLPLVSLLH*AEPART
Trigger: AGTCCTGGCTGGCTCTGCCAAGTGTAACAAACTCAC...CAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS CCA 90 bp GGCCAACAGCACGAGGTCCTGGGCACTCCTGGGAGGCCCCATGTGTaGGGCTCACCTAGGAGATCATGCTGCATTTGTGCTTCTTACCTC +
Preference number: 5 (lower is better)
Translates to: GQQHEVLGTPGRPHV*GSPRRSCCICASYL
Trigger: GAGGTAAGAAGCACAAATGCAGCATGATCTCCTAGGTGAGCCCCACACATGGGGCCTCCCAGGAGTGCCCAGGACCTCGTGCTGTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615386.4
ENST00000632455.1
CDS-3UTR CAA 90 bp AAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTCCTCTCTGGTGCACCTaGCAATCCTCATACTTGAGC +
Preference number: 5 (lower is better)
Translates to: KGDEQATGEFLTPCQPRAPLWCT*QSSYLS
Trigger: GCTCAAGTATGAGGATTGCAAGGTGCACCAGAGAGG...AGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCGAAGCCTTTCCCAATaGGCACTGCTGCGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: LTHTLSTSSALPCTCLGARSLSQ*ALLREV
Trigger: TACCTCCCGCAGCAGTGCCAATTGGGAAAGGCTTCG...GGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS TCA 90 bp GTCAGATCTGATATTCCCAGCTCTCCCCGTCCTCCAGACCCCTGTTaGTTATCCCACGCAGGTCTCTCCTCAGGGTCCCTTGCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: VRSDIPSSPRPPDPC*LSHAGLSSGSLAEA
Trigger: GGCTTCGGCAAGGGACCCTGAGGAGAGACCTGCGTGGGATAATCAACAGGGGTCTGGAGGACGGGGAGAGCTGGGAATATCAGATCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS GCA 90 bp TACCATGGCAACCATGCAGACGACCAGCCCACCCCGGGCTCTGCGTaGATGTCCATCCTGGTCCCTTCATCTCAATATCACCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: YHGNHADDQPTPGSA*MSILVPSSQYHQLC
Trigger: GCAGAGCTGGTGATATTGAGATGAAGGGACCAGGATGGACATGCACGCAGAGCCCGGGGTGGGCTGGTCGTCTGCATGGTTGCCATGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485138.5
ENST00000632381.1
CDS GCA 90 bp CATCCTCTTTCACCAGCCCTACAGGCTGAGGCTCTTAAGACAGAATaGTCCCAAGGAGCCAGTCCGGGCCTGGGAGCACCATCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: HPLSPALQAEALKTE*SQGASPGLGAPSVQ
Trigger: CTGGACAGATGGTGCTCCCAGGCCCGGACTGGCTCCTTGGGAGCATTCTGTCTTAAGAGCCTCAGCCTGTAGGGCTGGTGAAAGAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp TCCCAGATCCTCTTCTGCTGCAGCAGGTTCTGCTCATCTCGGCTCTaGGCCCAGGACTCCCGTCTCTGGAACCATCTGCAGAACTTGCTC +
Preference number: 5 (lower is better)
Translates to: SQILFCCSRFCSSRL*AQDSRLWNHLQNLL
Trigger: GAGCAAGTTCTGCAGATGGTTCCAGAGACGGGAGTCCTGGGCCCAGAGCCGAGATGAGCAGAACCTGCTGCAGCAGAAGAGGATCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp ACAGGAGAGTTCCTCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGTTTTCCACTGAGTCTTaGTCCAAATCCTCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: TGEFLTPCQPRAWAGLPLFSTES*SKSSEP
Trigger: GGGCTCTGAGGATTTGGACAAAGACTCAGTGGAAAA...CAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGAGGAACTCTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CTCCCTCACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTCTCCTCAGGGTCCCTaGCCGAAGCCTTTCCCAATT +
Preference number: 5 (lower is better)
Translates to: LPHSHAFHKLCTSLHLPGSPQGP*PKPFPI
Trigger: AATTGGGAAAGGCTTCGGCAAGGGACCCTGAGGAGA...CCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS GCA 90 bp AGACCCCTGTTGATTATCCCACGCAGGTCTCTCCTCAGGGTCCCTTaGCGAAGCCTTTCCCAATTGGCACTGCTGCGGGAGGTACTTCGA +
Preference number: 5 (lower is better)
Translates to: RPLLIIPRRSLLRVP*RSLSQLALLREVLR
Trigger: TCGAAGTACCTCCCGCAGCAGTGCCAATTGGGAAAGGCTTCGGCAAGGGACCCTGAGGAGAGACCTGCGTGGGATAATCAACAGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS CCA 90 bp ATGCAGACGACCAGCCCACCCCGGGCTCTGCGTGCATGTCCATCCTaGTCCCTTCATCTCAATATCACCAGCTCTGCAGTGCTCCAAACT +
Preference number: 5 (lower is better)
Translates to: MQTTSPPRALRACPS*SLHLNITSSAVLQT
Trigger: AGTTTGGAGCACTGCAGAGCTGGTGATATTGAGATGAAGGGACCAGGATGGACATGCACGCAGAGCCCGGGGTGGGCTGGTCGTCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485138.5
ENST00000632381.1
CDS-3UTR CAA 90 bp CCTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAAACCATCTGCAGAACTaGCTCCATAGGCAGAGAATT +
Preference number: 5 (lower is better)
Translates to: PGKGSLPTYDPGVETERPNHLQN*LHRQRI
Trigger: AATTCTCTGCCTATGGAGCAAGTTCTGCAGATGGTT...TGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp ACTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGCCTCTCTGGTGCACCTaGCAATCCTCATACTTGAGC +
Preference number: 5 (lower is better)
Translates to: THTLSTSSALPCTCLGALPLWCT*QSSYLS
Trigger: GCTCAAGTATGAGGATTGCAAGGTGCACCAGAGAGG...CAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CCTGTCGGAAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCTTATTGAAGATGGAGTaGGCAAGACCTAGCCCCACT +
Preference number: 5 (lower is better)
Translates to: PVGRVMSRPQESSSRPASLLKME*ARPSPT
Trigger: AGTGGGGCTAGGTCTTGCCAACTCCATCTTCAATAA...GCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTTCCGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp TCACGCCCTGCCAGCCCCGTGCTTGGGCTGGGCTTCCTCTGCCCCAGAGCTGAACCGAAAACGACTTTATaGAAGATGGAGTTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: SRPASPVLGLGFLCPRAEPKTTL*KMELAR
Trigger: TCTTGCCAACTCCATCTTCAATAAAGTCGTTTTCGG...TTCAGCTCTGGGGCAGAGGAAGCCCAGCCCAAGCACGGGGCTGGCAGGGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS GCA 90 bp CCACATGCAGGGATAGCCCTGAGTTCCGATTCCCTGCTCCTCTCCTaGTCTGTACTCCAAGCTGTCATGGTGAAGAAAGCAGGACACGGG +
Preference number: 5 (lower is better)
Translates to: PHAGIALSSDSLLLS*SVLQAVMVKKAGHG
Trigger: CCCGTGTCCTGCTTTCTTCACCATGACAGCTTGGAGTACAGAGCAGGAGAGGAGCAGGGAATCGGAACTCAGGGCTATCCCTGCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp ATCTGCAGAACTTGCTCCATAGGCAGAGAATTAGCCCTTTCTCCTTaGGCAGTGACAAACCCATGGGGTGTAGGGCCGGCTCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: ICRTCSIGRELALSP*AVTNPWGVGPAPWG
Trigger: CCCCCAAGGAGCCGGCCCTACACCCCATGGGTTTGTCACTGCCCAAGGAGAAAGGGCTAATTCTCTGCCTATGGAGCAAGTTCTGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359396.9
ENST00000611485.2
ENST00000632330.1
CDS-3UTR CAA 90 bp CCTGTCGGAAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCAACCATCTGCAGAACTaGCTCCATAGGCAGAGAATT +
Preference number: 5 (lower is better)
Translates to: PVGRVMSRPQESSSRPASNHLQN*LHRQRI
Trigger: AATTCTCTGCCTATGGAGCAAGTTCTGCAGATGGTT...GCTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTTCCGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAATGGACATCATTATCTTaGGCAGCTAGAAGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: LGRALSPLMTLGWRPSAQWTSLS*AARRRG
Trigger: TCCTCTCCTTCTAGCTGCCAAAGATAATGATGTCCA...TTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CTAGCCCCACTTCCCACCCCCAGAGCCGTTCCTGTCTCCCTCACTCACACGCTTTCATACTTGAGCAACTaGTTCAGGGCCTGGACATCA +
Preference number: 5 (lower is better)
Translates to: LAPLPTPRAVPVSLTHTLSYLSN*FRAWTS
Trigger: TGATGTCCAGGCCCTGAACAAGTTGCTCAAGTATGA...AAGCGTGTGAGTGAGGGAGACAGGAACGGCTCTGGGGGTGGGAAGTGGGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CTCACACGCTTTCCACAAGCTCTGCACTTCCCTGCACCTGCCTGGGTGCCCTGGTTGCAATCCTCATACTaGAGCAACTTGTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LTRFPQALHFPAPAWVPWLQSSY*SNLFRA
Trigger: GGCCCTGAACAAGTTGCTCAAGTATGAGGATTGCAA...CCAGGGCACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS GCA 90 bp GTTCTAGAGGCAAGCAGTGGAGATACAGAAGGCATTGTCCTCACCTaGCGTCCCCTCTTGGGTGGAGGGGCTGTGATGCTCTATCCTTAC +
Preference number: 5 (lower is better)
Translates to: VLEASSGDTEGIVLT*RPLLGGGAVMLYPY
Trigger: GTAAGGATAGAGCATCACAGCCCCTCCACCCAAGAGGGGACGGCAGGTGAGGACAATGCCTTCTGTATCTCCACTGCTTGCCTCTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp ACAGATGAAGGAAAGAGCGGTAATGTGTGGGGCGGAGGCATACATTaGGCACTTGTGGGCCACCTCCCTCCAGCTCATGTTCCTGGCAAT +
Preference number: 5 (lower is better)
Translates to: TDEGKSGNVWGGGIH*ALVGHLPPAHVPGN
Trigger: ATTGCCAGGAACATGAGCTGGAGGGAGGTGGCCCACAAGTGCCCAATGTATGCCTCCGCCCCACACATTACCGCTCTTTCCTTCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS-3UTR CAA 90 bp GCGCCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTTCTCCTCAGGGTCCCTaGCCGAAGCCTTTCCCAATT +
Preference number: 5 (lower is better)
Translates to: APKQAGLFLKCSDMQCSCSPQGP*PKPFPI
Trigger: AATTGGGAAAGGCTTCGGCAAGGGACCCTGAGGAGA...ACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp GCGCCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTTCCTCCAGACCCCTGTaGATTATCCCACGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: APKQAGLFLKCSDMQCSCSSRPL*IIPRRS
Trigger: AGACCTGCGTGGGATAATCAACAGGGGTCTGGAGGA...ACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTCGGTCCTCCAGACCCCTGTaGATTATCCCACGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PKQAGLFLKCSDMQCSCRSSRPL*IIPRRS
Trigger: AGACCTGCGTGGGATAATCAACAGGGGTCTGGAGGA...CCGACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS TCA 90 bp ACCCAAGCCCAAGGGGGAGATGACCTGGAGGACACGGGAGAAAGTTaGGAGCTCGACTTGGATCCCAGCAATGTAGATTTAAGCAGAGCG +
Preference number: 5 (lower is better)
Translates to: TQAQGGDDLEDTGES*ELDLDPSNVDLSRA
Trigger: CGCTCTGCTTAAATCTACATTGCTGGGATCCAAGTCGAGCTCTCAACTTTCTCCCGTGTCCTCCAGGTCATCTCCCCCTTGGGCTTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 90 bp CCAGCCTGTGGACGGGTTTTGAAGGTATCCGGCCCAGCCATTACTTaGAATAACCTCATATGCCCACAAGGGGACAGCACAGAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: PACGRVLKVSGPAIT*NNLICPQGDSTESP
Trigger: AGGGCTTTCTGTGCTGTCCCCTTGTGGGCATATGAGGTTATTGCAAGTAATGGCTGGGCCGGATACCTTCAAAACCCGTCCACAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 90 bp CTAACCAGTTTACCCCTGGAGTGGTCCTGTTTGACCCTCACCAGGTaGCCTGAGATTGCCCTCCAGGATAAGCCTTGTTTTGCATGGACC +
Preference number: 5 (lower is better)
Translates to: LTSLPLEWSCLTLTR*PEIALQDKPCFAWT
Trigger: GGTCCATGCAAAACAAGGCTTATCCTGGAGGGCAATCTCAGGGCACCTGGTGAGGGTCAAACAGGACCACTCCAGGGGTAAACTGGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 90 bp ACTCCTGGGAGGCCCCATGTGTGGGGCTCACCTAGGAGATCATGCTaGATTTGTGCTTCTTACCTCTCTGGTGCACCTTGCAATCCTCAT +
Preference number: 5 (lower is better)
Translates to: TPGRPHVWGSPRRSC*ICASYLSGAPCNPH
Trigger: ATGAGGATTGCAAGGTGCACCAGAGAGGTAAGAAGCACAAATGCAGCATGATCTCCTAGGTGAGCCCCACACATGGGGCCTCCCAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615386.4
ENST00000632455.1
CDS CCA 90 bp AGAGACTCAAAGCCTTCCTTTCTCACTAGACCATCCTGTACCGCATaGAATCCCACGCAATCCCACCCCACAGTTCTCCCTGTGAGTCCC +
Preference number: 5 (lower is better)
Translates to: RDSKPSFLTRPSCTA*NPTQSHPTVLPVSP
Trigger: GGGACTCACAGGGAGAACTGTGGGGTGGGATTGCGTGGGATTCCATGCGGTACAGGATGGTCTAGTGAGAAAGGAAGGCTTTGAGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS-3UTR CAA 90 bp GTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCCTGGCTGCCGGTTGAGATCTaGCCTGTCTTCCACCCGCAG +
Preference number: 5 (lower is better)
Translates to: VILNVHSLAFMLLLFLPWLPVEI*PVFHPQ
Trigger: CTGCGGGTGGAAGACAGGCAAGATCTCAACCGGCAG...CCAGGGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp TCCTGTCGGAAGGGTGATGAGCAGGCCACAGGAGAGTTCCTCACGCCCTGCCAGCCGAAAACGACTTTATaGAAGATGGAGTTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: SCRKGDEQATGEFLTPCQPKTTL*KMELAR
Trigger: TCTTGCCAACTCCATCTTCAATAAAGTCGTTTTCGG...CTGGCAGGGCGTGAGGAACTCTCCTGTGGCCTGCTCATCACCCTTCCGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS TCA 90 bp TCACCTCTGGAGGACGTCCCATCCTCTGATACCATAGGTCTCCTCTaGTCTCTGCATTACTCCTCCTCCCCAAGTTTAGCCAGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: SPLEDVPSSDTIGLL*SLHYSSSPSLARAS
Trigger: ACTGGCTCTGGCTAAACTTGGGGAGGAGGAGTAATGCAGAGATCAGAGGAGACCTATGGTATCAGAGGATGGGACGTCCTCCAGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485138.5
ENST00000619250.1
ENST00000632149.1
ENST00000632381.1
CDS TCA 90 bp CCGATTCCCTGCTCCTCTCCTGCTCTGTACTCCAAGCTGTCATGGTaGAGAAAGCAGGACACGGGTTTAGGAAGTTTTCAGGGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: PIPCSSPALYSKLSW*RKQDTGLGSFQGLE
Trigger: TTCCAGCCCCTGAAAACTTCCTAAACCCGTGTCCTGCTTTCTTCACCATGACAGCTTGGAGTACAGAGCAGGAGAGGAGCAGGGAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 90 bp AAAGACTTCAGGCTTTCCTCTATGACCAGACATCTGCCTCCTTCGTaGCCCAGGGAAAGCCCCAACAGGCAGGACTTCCTTCTAGCATGC +
Preference number: 5 (lower is better)
Translates to: KDFRLSSMTRHLPPS*PRESPNRQDFLLAC
Trigger: GCATGCTAGAAGGAAGTCCTGCCTGTTGGGGCTTTCCCTGGGTCACGAAGGAGGCAGATGTCTGGTCATAGAGGAAAGCCTGAAGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 90 bp CAAGCCTTTCTAGCCAAAGTCTGCAGAGGCAGCCCCCATATGATCTaGGGAAAAGTGAGGGCAGACAGGACATGCGGAAGCAGCCTATTC +
Preference number: 5 (lower is better)
Translates to: QAFLAKVCRGSPHMI*GKVRADRTCGSSLF
Trigger: GAATAGGCTGCTTCCGCATGTCCTGTCTGCCCTCACTTTTCCTCAGATCATATGGGGGCTGCCTCTGCAGACTTTGGCTAGAAAGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 90 bp GTCTCAGCACTGCAGAGCACACCATTCTCCCTATGTCTGTGCCCATaGAGCTCTTTCCTTCTAGAATCCAACTCCCCCAGCCCGCCAATT +
Preference number: 5 (lower is better)
Translates to: VSALQSTPFSLCLCP*SSFLLESNSPSPPI
Trigger: AATTGGCGGGCTGGGGGAGTTGGATTCTAGAAGGAAAGAGCTTCATGGGCACAGACATAGGGAGAATGGTGTGCTCTGCAGTGCTGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp ACCAGGTGCCCTGAGATTGCCCTCCAGGATAAGCCTTGTTTTGCATaGACCGAGGGGTGCAAGGAATTCCTGTCTCATATTTGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: TRCPEIALQDKPCFA*TEGCKEFLSHICGG
Trigger: CCCTCCACAAATATGAGACAGGAATTCCTTGCACCCCTCGGTCCATGCAAAACAAGGCTTATCCTGGAGGGCAATCTCAGGGCACCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp CTGTTTCCCCCATGGCTCCTGGCATTTACAGAGAGGTGGGTTATATaGCTTCTGTGGGACAGCGGATTGGAGACGATAGATTCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LFPPWLLAFTERWVI*LLWDSGLETIDSEA
Trigger: GGCCTCTGAATCTATCGTCTCCAATCCGCTGTCCCACAGAAGCCATATAACCCACCTCTCTGTAAATGCCAGGAGCCATGGGGGAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615386.4
ENST00000632455.1
CDS-3UTR CAA 90 bp CCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTCGGATTAGCCCTTTCTCCTaGGGCAGTGACAAACCCATG +
Preference number: 5 (lower is better)
Translates to: PKQAGLFLKCSDMQCSCRISPFS*GSDKPM
Trigger: CATGGGTTTGTCACTGCCCAAGGAGAAAGGGCTAAT...CCGACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CTGGGAAGGGCTCTCTCCCCACTTATGACCCTGGGGTGGAGACCGAGCGCCCAATGTTTGGTTTTTGTTTaGTTTGATGCACCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LGRALSPLMTLGWRPSAQCLVFV*FDAPRK
Trigger: TTTCCTGGGTGCATCAAACAAAACAAAAACCAAACA...TTGGGCGCTCGGTCTCCACCCCAGGGTCATAAGTGGGGAGAGAGCCCTTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp GCGCCCAAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTCTCAACGTACATTCCTaGGCGTTCATGCTACTCCTC +
Preference number: 5 (lower is better)
Translates to: APKQAGLFLKCSDMQCSCLNVHS*AFMLLL
Trigger: GAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAG...ACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTTGGGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp CTGCTATGTGTAGCGCTGTTTCCCCCATGGCTCCTGGCATTTACAGAGAGGTGGTCTCTCTGGTGCACCTaGCAATCCTCATACTTGAGC +
Preference number: 5 (lower is better)
Translates to: LLCVALFPPWLLAFTERWSLWCT*QSSYLS
Trigger: GCTCAAGTATGAGGATTGCAAGGTGCACCAGAGAGA...CCACCTCTCTGTAAATGCCAGGAGCCATGGGGGAAACAGCGCTACACATAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633826.1
CDS TCA 90 bp CTAACACTCCCGATTTTTCTCACCTCTGGAGGACGTCCCATCCTCTaGTACCATAGGTCTCCTCTGATCTCTGCATTACTCCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LTLPIFLTSGGRPIL*YHRSPLISALLLLP
Trigger: GGGGAGGAGGAGTAATGCAGAGATCAGAGGAGACCTATGGTATCAGAGGATGGGACGTCCTCCAGAGGTGAGAAAAATCGGGAGTGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000485138.5
ENST00000619250.1
ENST00000632149.1
ENST00000632381.1
CDS TCA 90 bp ACTTGTGGGCCACCTCCCTCCAGCTCATGTTCCTGGCAATGGGGATaGGAAAGCCAAAGTGGTTGTTTAGAGATTTGGAATCGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: TCGPPPSSSCSWQWG*ESQSGCLEIWNRLP
Trigger: TGGCAGCCGATTCCAAATCTCTAAACAACCACTTTGGCTTTCTCATCCCCATTGCCAGGAACATGAGCTGGAGGGAGGTGGCCCACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp TATACTATGTGTTCCTGCCAGAGAGACTGTTCTAGAGGCAAGCAGTaGAGATACAGAAGGCATTGTCCTCACCTGCCGTCCCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: YTMCSCQRDCSRGKQ*RYRRHCPHLPSPLG
Trigger: CCCAAGAGGGGACGGCAGGTGAGGACAATGCCTTCTGTATCTCCACTGCTTGCCTCTAGAACAGTCTCTCTGGCAGGAACACATAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp CAGCATCCTTCTGGGAAGTGCCCACCCAAAGAAGAGTCATTGCTCTaGACACCTGATATCCAGCAAGAAGAAGGCCAAGAAAGTGCGGAG +
Preference number: 5 (lower is better)
Translates to: QHPSGKCPPKEESLL*TPDIQQEEGQESAE
Trigger: CTCCGCACTTTCTTGGCCTTCTTCTTGCTGGATATCAGGTGTCCAGAGCAATGACTCTTCTTTGGGTGGGCACTTCCCAGAAGGATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp AAATATCAGGAAGTGAGAAAACCCAAGCCCAAGGGGGAGATGACCTaGAGGACACGGGAGAAAGTTGAGAGCTCGACTTGGATCCCAGCA +
Preference number: 5 (lower is better)
Translates to: KYQEVRKPKPKGEMT*RTREKVESSTWIPA
Trigger: TGCTGGGATCCAAGTCGAGCTCTCAACTTTCTCCCGTGTCCTCCAGGTCATCTCCCCCTTGGGCTTGGGTTTTCTCACTTCCTGATATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS-3UTR CAA 90 bp CTGCTATGTGTAGCGCTGTTTCCCCCATGGCTCCTGGCATTTACAGAGAGGTGGTTGCAATCCTCATACTaGAGCAACTTGTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LLCVALFPPWLLAFTERWLQSSY*SNLFRA
Trigger: GGCCCTGAACAAGTTGCTCAAGTATGAGGATTGCAA...CCACCTCTCTGTAAATGCCAGGAGCCATGGGGGAAACAGCGCTACACATAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633826.1
CDS-3UTR CAA 90 bp AGAGCTGAAGGAGTAATGCAGGCCTGGAGCAGTGATTCTCAACGTACATTCCTTTGGATCCGCTGCCGGTaGAGATCTTGCCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: RAEGVMQAWSSDSQRTFLWIRCR*RSCLSS
Trigger: GGAAGACAGGCAAGATCTCAACCGGCAGCGGATCCA...AAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCCTTCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS GCA 90 bp AAGCCAGTGAGGACGACCTACTCTCTAACAACAATGCCATTCTGTTaGCCCAAGATGTCATCAGCCAAACATGTGCTCCAGTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: KPVRTTYSLTTMPFC*PKMSSAKHVLQSPL
Trigger: GAGTGGGGACTGGAGCACATGTTTGGCTGATGACATCTTGGGGCAACAGAATGGCATTGTTGTTAGAGAGTAGGTCGTCCTCACTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 90 bp GTAACACTGTGTTTCCCAGGGAGTCCTGGAACCATCTGCAGAACTTaGTCCATAGGCAGAGAATTAGCCCTTTCTCCTTGGGCAGTGACA +
Preference number: 5 (lower is better)
Translates to: VTLCFPGSPGTICRT*SIGRELALSPWAVT
Trigger: TGTCACTGCCCAAGGAGAAAGGGCTAATTCTCTGCCTATGGAGCAAGTTCTGCAGATGGTTCCAGGACTCCCTGGGAAACACAGTGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632330.1
CDS-3UTR CAA 90 bp GGAGTAATGCAGGCCTGGAGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGTGAGTTTGTTACACTaGGCAGAGCCAGCCAGGACT +
Preference number: 5 (lower is better)
Translates to: GVMQAWSSDSQRTFLGVHVSLLH*AEPART
Trigger: AGTCCTGGCTGGCTCTGCCAAGTGTAACAAACTCAC...ATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp AGAGCTGAAGGAGTAATGCAGGCCTGGAGCAGTGATTCTCAACGTACATTCCTTCGAGCCTCCCGCTTCTaGGTGGTGATGATAAGTTCC +
Preference number: 5 (lower is better)
Translates to: RAEGVMQAWSSDSQRTFLRASRF*VVMISS
Trigger: GGAACTTATCATCACCACCAAGAAGCGGGAGGCTCG...AAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCCTTCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS GCA 90 bp TTAGGAAACTCCCCTTGCAGGCAATTTCAGCATCCTTCTGGGAAGTaGCCACCCAAAGAAGAGTCATTGCTCTGGACACCTGATATCCAG +
Preference number: 5 (lower is better)
Translates to: LGNSPCRQFQHPSGK*PPKEESLLWTPDIQ
Trigger: CTGGATATCAGGTGTCCAGAGCAATGACTCTTCTTTGGGTGGGCACTTCCCAGAAGGATGCTGAAATTGCCTGCAAGGGGAGTTTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 90 bp ATCCAACTCCCCCAGCCCGCCAATTGTTCATTGTGTCTTCTGCACTaGCTATGCCTAGAAATACACCTAGGATGGTGTAGATGCTCACTG +
Preference number: 5 (lower is better)
Translates to: IQLPQPANCSLCLLH*LCLEIHLGWCRCSL
Trigger: CAGTGAGCATCTACACCATCCTAGGTGTATTTCTAGGCATAGGCAGTGCAGAAGACACAATGAACAATTGGCGGGCTGGGGGAGTTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 90 bp GAGATTGCCCTCCAGGATAAGCCTTGTTTTGCATGGACCGAGGGGTaGAAGGAATTCCTGTCTCATATTTGTGGAGGGAGTCATATGCAC +
Preference number: 5 (lower is better)
Translates to: EIALQDKPCFAWTEG*KEFLSHICGGSHMH
Trigger: GTGCATATGACTCCCTCCACAAATATGAGACAGGAATTCCTTGCACCCCTCGGTCCATGCAAAACAAGGCTTATCCTGGAGGGCAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 90 bp TCAGTGCATTTCAGGTACGGAGGGGAGGAGTTCTATGTAGACATGTaGTTACCTGCTAACCAGTTTACCCCTGGAGTGGTCCTGTTTGAC +
Preference number: 5 (lower is better)
Translates to: SVHFRYGGEEFYVDM*LPANQFTPGVVLFD
Trigger: GTCAAACAGGACCACTCCAGGGGTAAACTGGTTAGCAGGTAAGCACATGTCTACATAGAACTCCTCCCCTCCGTACCTGAAATGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp TGGTGCACCTTGCAATCCTCATACTTGAGCAACTTGTTCAGGGCCTaGACATCATTATCTTTGGCAGCTAGAAGGAGAGGAGACTCCCAG +
Preference number: 5 (lower is better)
Translates to: WCTLQSSYLSNLFRA*TSLSLAARRRGDSQ
Trigger: CTGGGAGTCTCCTCTCCTTCTAGCTGCCAAAGATAATGATGTCCAGGCCCTGAACAAGTTGCTCAAGTATGAGGATTGCAAGGTGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359396.9
ENST00000611485.2
ENST00000615386.4
ENST00000632455.1
CDS-3UTR CAA 90 bp AAGCAGGCTGGCCTGTTTTTAAAGTGCTCTGACATGCAGTGCTCCTGTCGGAAGTTTTCCACTGAGTCTTaGTCCAAATCCTCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: KQAGLFLKCSDMQCSCRKFSTES*SKSSEP
Trigger: GGGCTCTGAGGATTTGGACAAAGACTCAGTGGAAAA...CTTCCGACAGGAGCACTGCATGTCAGAGCACTTTAAAAACAGGCCAGCCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS TCA 90 bp GGAGTTAAAGGCAGGATGCTTGGCCAAGAATCCAGCCCCAGGCTCTaGCCACTAAATTATGTGGTTCTTCTAGTTTTATGGCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GVKGRMLGQESSPRL*PLNYVVLLVLWLLL
Trigger: CAGGAGGAGCCATAAAACTAGAAGAACCACATAATTTAGTGGTCAGAGCCTGGGGCTGGATTCTTGGCCAAGCATCCTGCCTTTAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 90 bp CCCCAGCAAGACGCCTGGCCCTTAGAGAAGTACTCACAAGAGGCTTaGAGAATCGAATTAGATCTTAAGATAGTGAACACCTGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: PQQDAWPLEKYSQEA*RIELDLKIVNTCAH
Trigger: ATGGGCACAGGTGTTCACTATCTTAAGATCTAATTCGATTCTGCAAGCCTCTTGTGAGTACTTCTCTAAGGGCCAGGCGTCTTGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp CTGCGTGCTAAGCACCAAGAAACGTCCACTGTAAAAAGAGGAGTTTaGGTTCCCGATCATCCTGGAGAGACTCAAAGCCTTCCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: LRAKHQETSTVKRGV*VPDHPGETQSLPFS
Trigger: TGAGAAAGGAAGGCTTTGAGTCTCTCCAGGATGATCGGGAACCCAAACTCCTCTTTTTACAGTGGACGTTTCTTGGTGCTTAGCACGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp TTTTGCATGGACCGAGGGGTGCAAGGAATTCCTGTCTCATATTTGTaGAGGGAGTCATATGCACAGGCTAGCAGGATTTCTCCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: FCMDRGVQGIPVSYL*RESYAQASRISPVA
Trigger: TGCAACAGGAGAAATCCTGCTAGCCTGTGCATATGACTCCCTCCACAAATATGAGACAGGAATTCCTTGCACCCCTCGGTCCATGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS-3UTR CAA 90 bp AGAGCTGAAGGAGTAATGCAGGCCTGGAGCAGTGATTCTCAACGTACATTCCTTATTAGCCCTTTCTCCTaGGGCAGTGACAAACCCATG +
Preference number: 5 (lower is better)
Translates to: RAEGVMQAWSSDSQRTFLISPFS*GSDKPM
Trigger: CATGGGTTTGTCACTGCCCAAGGAGAAAGGGCTAAT...AAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCCTTCAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp GGAGTAATGCAGGCCTGGAGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATTTGCAATCCTCATACTaGAGCAACTTGTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GVMQAWSSDSQRTFLGVHLQSSY*SNLFRA
Trigger: GGCCCTGAACAAGTTGCTCAAGTATGAGGATTGCAA...ATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS TCA 90 bp AGGGAACAGGTAACCACAGTGGGAGGGGTTGAAAAATTTCTGAGTTaGGAATGGGATCTAAGCATCAGGGATCGCGTTCACCTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: REQVTTVGGVEKFLS*EWDLSIRDRVHLCF
Trigger: GAAACAGAGGTGAACGCGATCCCTGATGCTTAGATCCCATTCTCAACTCAGAAATTTTTCAACCCCTCCCACTGTGGTTACCTGTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474388.1
ENST00000619250.1
ENST00000631384.1
ENST00000632149.1
CDS TCA 90 bp AGTCATCCCATGTTTATCTCAATGCCCCCATGCCTTCTCTTTGGTTaGCGGCACAGATTAGGAAACTCCCCTTGCAGGCAATTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: SHPMFISMPPCLLFG*RHRLGNSPCRQFQH
Trigger: ATGCTGAAATTGCCTGCAAGGGGAGTTTCCTAATCTGTGCCGTCAACCAAAGAGAAGGCATGGGGGCATTGAGATAAACATGGGATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 90 bp AATTTCAGCATCCTTCTGGGAAGTGCCCACCCAAAGAAGAGTCATTaGTCTGGACACCTGATATCCAGCAAGAAGAAGGCCAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: NFSILLGSAHPKKSH*SGHLISSKKKAKKV
Trigger: CACTTTCTTGGCCTTCTTCTTGCTGGATATCAGGTGTCCAGAGCAATGACTCTTCTTTGGGTGGGCACTTCCCAGAAGGATGCTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 90 bp AGAAACGTCCACTGTAAAAAGAGGAGTTTGGGTTCCCGATCATCCTaGAGAGACTCAAAGCCTTCCTTTCTCACTAGACCATCCTGTACC +
Preference number: 5 (lower is better)
Translates to: RNVHCKKRSLGSRSS*RDSKPSFLTRPSCT
Trigger: GGTACAGGATGGTCTAGTGAGAAAGGAAGGCTTTGAGTCTCTCCAGGATGATCGGGAACCCAAACTCCTCTTTTTACAGTGGACGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS-3UTR CAA 90 bp AGAGCTGAAGGAGTAATGCAGGCCTGGAGCAGTGATTCTCAACGTACATTCCTTTCATACTTGAGCAACTaGTTCAGGGCCTGGACATCA +
Preference number: 5 (lower is better)
Translates to: RAEGVMQAWSSDSQRTFLSYLSN*FRAWTS
Trigger: TGATGTCCAGGCCCTGAACAAGTTGCTCAAGTATGA...AAGGAATGTACGTTGAGAATCACTGCTCCAGGCCTGCATTACTCCTTCAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS-3UTR CAA 90 bp AGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCTTATTGAAGATGGAGTaGGCAAGACCTAGCCCCACT +
Preference number: 5 (lower is better)
Translates to: SSDSQRTFLGVHATPLSPLLKME*ARPSPT
Trigger: AGTGGGGCTAGGTCTTGCCAACTCCATCTTCAATAA...GGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS TCA 90 bp TCATTATCTTTGGCAGCTAGAAGGAGAGGAGACTCCCAGATCCTATaGAGGGATGGAATAGGAAAGCTGGAAACAGTGAGCATACCTAGT +
Preference number: 5 (lower is better)
Translates to: SLSLAARRRGDSQIL*RDGIGKLETVSIPS
Trigger: ACTAGGTATGCTCACTGTTTCCAGCTTTCCTATTCCATCCCTTCATAGGATCTGGGAGTCTCCTCTCCTTCTAGCTGCCAAAGATAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS-3UTR CAA 90 bp AGCAGTGATTCTCAACGTACATTCCTTGGCGTTCATGCTACTCCTCTTTCTCCCTGTTTGGTTTTTGTTTaGTTTGATGCACCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: SSDSQRTFLGVHATPLSPCLVFV*FDAPRK
Trigger: TTTCCTGGGTGCATCAAACAAAACAAAAACCAAACA...GGGAGAAAGAGGAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS GCA 90 bp TTCATTCATTCATTCATTCATTCATTATCTCTGTCTCTTCCTTTCTaGCTCTCGTCTTTCTTCTCACATCATCTCAACAGCCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: FIHSFIHSLSLSLPF*LSSFFSHHLNSLPS
Trigger: AGAAGGAAGGCTGTTGAGATGATGTGAGAAGAAAGACGAGAGGCAGAAAGGAAGAGACAGAGATAATGAATGAATGAATGAATGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 72 bp CCCTGTAGAGGTCCCGTCTCCTGTCTCCTGCCTTCCTaGCGAGTTCCTTGGGAGTCTCCCAGCAGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: PCRGPVSCLLPS*RVPWESPSSPS
Trigger: GCTGGGGCTGCTGGGAGACTCCCAAGGAACTCGTCAGGAAGGCAGGAGACAGGAGACGGGACCTCTACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS CAA 90 bp GTCCAAATCCTCAGAGCCCCGGGTGTGGAAGGCCTGTGCGTAGCGTaGGATCCGCTGCCGGTTGAGATCTTGCCTGTCTTCCACCCGCAG +
Preference number: 6 (lower is better)
Translates to: VQILRAPGVEGLCVA*DPLPVEILPVFHPQ
Trigger: CTGCGGGTGGAAGACAGGCAAGATCTCAACCGGCAGCGGATCCAACGCTACGCACAGGCCTTCCACACCCGGGGCTCTGAGGATTTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS TCA 72 bp GGAAGGCCTGTGCGTAGCGTTGGATCCGCTGCCGGTTaGGATCTTGCCTGTCTTCCACCCGCAGGAACCAGC +
Preference number: 6 (lower is better)
Translates to: GRPVRSVGSAAG*DLACLPPAGTS
Trigger: GCTGGTTCCTGCGGGTGGAAGACAGGCAAGATCTCAACCGGCAGCGGATCCAACGCTACGCACAGGCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS GCA 72 bp GGAGACTCCCAGATCCTCTTCTGCTGCAGCAGGTTCTaGTCATCTCGGCTCTGGGCCCAGGACTCCCGTCTC +
Preference number: 6 (lower is better)
Translates to: GDSQILFCCSRF*SSRLWAQDSRL
Trigger: GAGACGGGAGTCCTGGGCCCAGAGCCGAGATGAGCAGAACCTGCTGCAGCAGAAGAGGATCTGGGAGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS CCA 72 bp GAATTAGCCCTTTCTCCTTGGGCAGTGACAAACCCATaGGGTGTAGGGCCGGCTCCTTGGGGGCCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: ELALSPWAVTNP*GVGPAPWGPEA
Trigger: GGCCTCAGGCCCCCAAGGAGCCGGCCCTACACCCCATGGGTTTGTCACTGCCCAAGGAGAAAGGGCTAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359396.9
ENST00000611485.2
ENST00000632330.1
CDS CAA 72 bp CTCAGAGCCCCGGGTGTGGAAGGCCTGTGCGTAGCGTaGGATCCGCTGCCGGTTGAGATCTTGCCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: LRAPGVEGLCVA*DPLPVEILPVF
Trigger: GAAGACAGGCAAGATCTCAACCGGCAGCGGATCCAACGCTACGCACAGGCCTTCCACACCCGGGGCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS GCA 72 bp CACCGTCTCCCTGTAGAGGTCCCGTCTCCTGTCTCCTaGCTTCCTGACGAGTTCCTTGGGAGTCTCCCAGCA +
Preference number: 6 (lower is better)
Translates to: HRLPVEVPSPVS*LPDEFLGSLPA
Trigger: TGCTGGGAGACTCCCAAGGAACTCGTCAGGAAGGCAGGAGACAGGAGACGGGACCTCTACAGGGAGACGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS GCA 72 bp GTCCAAATCCTCAGAGCCCCGGGTGTGGAAGGCCTGTaGGTAGCGTTGGATCCGCTGCCGGTTGAGATCTTG +
Preference number: 6 (lower is better)
Translates to: VQILRAPGVEGL*VALDPLPVEIL
Trigger: CAAGATCTCAACCGGCAGCGGATCCAACGCTACGCACAGGCCTTCCACACCCGGGGCTCTGAGGATTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS GCA 72 bp TCACCAGCCCTACAGGCTGAGGCTCTTAAGACAGAATaGTCCCAAGGAGCCAGTCCGGGCCTGGGAGCACCA +
Preference number: 6 (lower is better)
Translates to: SPALQAEALKTE*SQGASPGLGAP
Trigger: TGGTGCTCCCAGGCCCGGACTGGCTCCTTGGGAGCATTCTGTCTTAAGAGCCTCAGCCTGTAGGGCTGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp GCGGTAATGTGTGGGGCGGAGGCATACATTGGGCACTaGTGGGCCACCTCCCTCCAGCTCATGTTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: AVMCGAEAYIGH*WATSLQLMFLA
Trigger: TGCCAGGAACATGAGCTGGAGGGAGGTGGCCCACAAGTGCCCAATGTATGCCTCCGCCCCACACATTACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp GCAAGCAGTGGAGATACAGAAGGCATTGTCCTCACCTaGCGTCCCCTCTTGGGTGGAGGGGCTGTGATGCTC +
Preference number: 6 (lower is better)
Translates to: ASSGDTEGIVLT*RPLLGGGAVML
Trigger: GAGCATCACAGCCCCTCCACCCAAGAGGGGACGGCAGGTGAGGACAATGCCTTCTGTATCTCCACTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp CTCTCCTCAGGGTCCCTTGCCGAAGCCTTTCCCAATTaGCACTGCTGCGGGAGGTACTTCGAGACACTGAGG +
Preference number: 6 (lower is better)
Translates to: LSSGSLAEAFPN*HCCGRYFETLR
Trigger: CCTCAGTGTCTCGAAGTACCTCCCGCAGCAGTGCCAATTGGGAAAGGCTTCGGCAAGGGACCCTGAGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS CCA 72 bp ACCAGCCCACCCCGGGCTCTGCGTGCATGTCCATCCTaGTCCCTTCATCTCAATATCACCAGCTCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: TSPPRALRACPS*SLHLNITSSAV
Trigger: CACTGCAGAGCTGGTGATATTGAGATGAAGGGACCAGGATGGACATGCACGCAGAGCCCGGGGTGGGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485138.5
ENST00000632381.1
CDS CAA 72 bp CGTGCGGTTATTGGTCCTGCCTTCCTGACGAGTTCCTaGGGAGTCTCCCAGCAGCCCCAGCCAGTTTGGAGA +
Preference number: 6 (lower is better)
Translates to: RAVIGPAFLTSS*GVSQQPQPVWR
Trigger: TCTCCAAACTGGCTGGGGCTGCTGGGAGACTCCCAAGGAACTCGTCAGGAAGGCAGGACCAATAACCGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436401.1
CDS CAA 72 bp CCAGCAGCCCCAGCCAGTTTGGAGAGGGCTGTGAGTTaGTTACACTTGGCAGAGCCAGCCAGGACTCTGCAG +
Preference number: 6 (lower is better)
Translates to: PAAPASLERAVS*LHLAEPARTLQ
Trigger: CTGCAGAGTCCTGGCTGGCTCTGCCAAGTGTAACAAACTCACAGCCCTCTCCAAACTGGCTGGGGCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611485.2
CDS CAA 90 bp CAGACCCCTGTTGATTATCCCACGCAGGTCTCTCCTCAGGGTCCCTaGCCGAAGCCTTTCCCAATTGGCACTGCTGCGGGAGGTACTTCG +
Preference number: 6 (lower is better)
Translates to: QTPVDYPTQVSPQGP*PKPFPIGTAAGGTS
Trigger: CGAAGTACCTCCCGCAGCAGTGCCAATTGGGAAAGGCTTCGGCAAGGGACCCTGAGGAGAGACCTGCGTGGGATAATCAACAGGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS CAA 90 bp AAGGAAAGAGCGGTAATGTGTGGGGCGGAGGCATACATTGGGCACTaGTGGGCCACCTCCCTCCAGCTCATGTTCCTGGCAATGGGGATG +
Preference number: 6 (lower is better)
Translates to: KERAVMCGAEAYIGH*WATSLQLMFLAMGM
Trigger: CATCCCCATTGCCAGGAACATGAGCTGGAGGGAGGTGGCCCACAAGTGCCCAATGTATGCCTCCGCCCCACACATTACCGCTCTTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp TTGATTATCCCACGCAGGTCTCTCCTCAGGGTCCCTTaGCGAAGCCTTTCCCAATTGGCACTGCTGCGGGAG +
Preference number: 6 (lower is better)
Translates to: LIIPRRSLLRVP*RSLSQLALLRE
Trigger: CTCCCGCAGCAGTGCCAATTGGGAAAGGCTTCGGCAAGGGACCCTGAGGAGAGACCTGCGTGGGATAATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS GCA 72 bp AACCATGCAGACGACCAGCCCACCCCGGGCTCTGCGTaGATGTCCATCCTGGTCCCTTCATCTCAATATCAC +
Preference number: 6 (lower is better)
Translates to: NHADDQPTPGSA*MSILVPSSQYH
Trigger: GTGATATTGAGATGAAGGGACCAGGATGGACATGCACGCAGAGCCCGGGGTGGGCTGGTCGTCTGCATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485138.5
ENST00000632381.1
CDS CCA 72 bp GGAAAGAGCGGTAATGTGTGGGGCGGAGGCATACATTaGGCACTTGTGGGCCACCTCCCTCCAGCTCATGTT +
Preference number: 6 (lower is better)
Translates to: GKSGNVWGGGIH*ALVGHLPPAHV
Trigger: AACATGAGCTGGAGGGAGGTGGCCCACAAGTGCCCAATGTATGCCTCCGCCCCACACATTACCGCTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp TCTCTCCTCAGGGTCCCTTGCCGAAGCCTTTCCCAATaGGCACTGCTGCGGGAGGTACTTCGAGACACTGAG +
Preference number: 6 (lower is better)
Translates to: SLLRVPCRSLSQ*ALLREVLRDTE
Trigger: CTCAGTGTCTCGAAGTACCTCCCGCAGCAGTGCCAATTGGGAAAGGCTTCGGCAAGGGACCCTGAGGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS CAA 72 bp GTTGATTATCCCACGCAGGTCTCTCCTCAGGGTCCCTaGCCGAAGCCTTTCCCAATTGGCACTGCTGCGGGA +
Preference number: 6 (lower is better)
Translates to: VDYPTQVSPQGP*PKPFPIGTAAG
Trigger: TCCCGCAGCAGTGCCAATTGGGAAAGGCTTCGGCAAGGGACCCTGAGGAGAGACCTGCGTGGGATAATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS CAA 72 bp TGTGCGGTTATTGGTCCTGCCTTCCTGACGAGTTCCTaGGGAGTCTCCCAGCAGCCCCAGCCAGTTTGGAGA +
Preference number: 6 (lower is better)
Translates to: CAVIGPAFLTSS*GVSQQPQPVWR
Trigger: TCTCCAAACTGGCTGGGGCTGCTGGGAGACTCCCAAGGAACTCGTCAGGAAGGCAGGACCAATAACCGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633318.1
CDS CCA 72 bp GCAGTGACCACAGATGAAGGAAAGAGCGGTAATGTGTaGGGCGGAGGCATACATTGGGCACTTGTGGGCCAC +
Preference number: 6 (lower is better)
Translates to: AVTTDEGKSGNV*GGGIHWALVGH
Trigger: GTGGCCCACAAGTGCCCAATGTATGCCTCCGCCCCACACATTACCGCTCTTTCCTTCATCTGTGGTCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp TACCTGCTAACCAGTTTACCCCTGGAGTGGTCCTGTTaGACCCTCACCAGGTGCCCTGAGATTGCCCTCCAG +
Preference number: 6 (lower is better)
Translates to: YLLTSLPLEWSC*TLTRCPEIALQ
Trigger: CTGGAGGGCAATCTCAGGGCACCTGGTGAGGGTCAAACAGGACCACTCCAGGGGTAAACTGGTTAGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp GTAGCTTCTGCTGTAAGAGGGTGTTGTCCCGGGGGCTaGTGCGGTTATTGGTCCTGCCTTCCTGACGAGTTC +
Preference number: 6 (lower is better)
Translates to: VASAVRGCCPGG*CGYWSCLPDEF
Trigger: GAACTCGTCAGGAAGGCAGGACCAATAACCGCACAAGCCCCCGGGACAACACCCTCTTACAGCAGAAGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633318.1
CDS TCA 72 bp AGGCTTTCCTCTATGACCAGACATCTGCCTCCTTCGTaGCCCAGGGAAAGCCCCAACAGGCAGGACTTCCTT +
Preference number: 6 (lower is better)
Translates to: RLSSMTRHLPPS*PRESPNRQDFL
Trigger: AAGGAAGTCCTGCCTGTTGGGGCTTTCCCTGGGTCACGAAGGAGGCAGATGTCTGGTCATAGAGGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp AGGCCCCATGTGTGGGGCTCACCTAGGAGATCATGCTaGATTTGTGCTTCTTACCTCTCTGGTGCACCTTGC +
Preference number: 6 (lower is better)
Translates to: RPHVWGSPRRSC*ICASYLSGAPC
Trigger: GCAAGGTGCACCAGAGAGGTAAGAAGCACAAATGCAGCATGATCTCCTAGGTGAGCCCCACACATGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615386.4
ENST00000632455.1
CDS CCA 72 bp ACTTGCTCCATAGGCAGAGAATTAGCCCTTTCTCCTTaGGCAGTGACAAACCCATGGGGTGTAGGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: TCSIGRELALSP*AVTNPWGVGPA
Trigger: AGCCGGCCCTACACCCCATGGGTTTGTCACTGCCCAAGGAGAAAGGGCTAATTCTCTGCCTATGGAGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359396.9
ENST00000611485.2
ENST00000632330.1
CDS CCA 72 bp GAAGTGAGAAAACCCAAGCCCAAGGGGGAGATGACCTaGAGGACACGGGAGAAAGTTGAGAGCTCGACTTGG +
Preference number: 6 (lower is better)
Translates to: EVRKPKPKGEMT*RTREKVESSTW
Trigger: CCAAGTCGAGCTCTCAACTTTCTCCCGTGTCCTCCAGGTCATCTCCCCCTTGGGCTTGGGTTTTCTCACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp AGCGCTGTTTCCCCCATGGCTCCTCTCTGGTGCACCTaGCAATCCTCATACTTGAGCAACTTGTTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SAVSPMAPLWCT*QSSYLSNLFRA
Trigger: GGCCCTGAACAAGTTGCTCAAGTATGAGGATTGCAAGGTGCACCAGAGAGGAGCCATGGGGGAAACAGCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS CAA 72 bp GATACAGAAGGCATTGTCCTCACCTGCCGTCCCCTCTaGGGTGGAGGGGCTGTGATGCTCTATCCTTACAAG +
Preference number: 6 (lower is better)
Translates to: DTEGIVLTCRPL*GGGAVMLYPYK
Trigger: CTTGTAAGGATAGAGCATCACAGCCCCTCCACCCAAGAGGGGACGGCAGGTGAGGACAATGCCTTCTGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp GGTGCCCTGAGATTGCCCTCCAGGATAAGCCTTGTTTaGCATGGACCGAGGGGTGCAAGGAATTCCTGTCTC +
Preference number: 6 (lower is better)
Translates to: GALRLPSRISLV*HGPRGARNSCL
Trigger: GAGACAGGAATTCCTTGCACCCCTCGGTCCATGCAAAACAAGGCTTATCCTGGAGGGCAATCTCAGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp ACATGTGCTTACCTGCTAACCAGTTTACCCCTGGAGTGGTCCTGTTaGACCCTCACCAGGTGCCCTGAGATTGCCCTCCAGGATAAGCCT +
Preference number: 6 (lower is better)
Translates to: TCAYLLTSLPLEWSC*TLTRCPEIALQDKP
Trigger: AGGCTTATCCTGGAGGGCAATCTCAGGGCACCTGGTGAGGGTCAAACAGGACCACTCCAGGGGTAAACTGGTTAGCAGGTAAGCACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp TCATTGCCAGAAGATCACACGGAGTTAAAGGCAGGATaGTTGGCCAAGAATCCAGCCCCAGGCTCTGACCAC +
Preference number: 6 (lower is better)
Translates to: SLPEDHTELKAG*LAKNPAPGSDH
Trigger: GTGGTCAGAGCCTGGGGCTGGATTCTTGGCCAAGCATCCTGCCTTTAACTCCGTGTGATCTTCTGGCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp GTACTCGAGGGAAGAGACCAGCCACTAACTCTTCCCTaGCCTCCTCCAATATGCTTCCACGTTTGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: VLEGRDQPLTLP*PPPICFHVCVP
Trigger: TGGGACACAAACGTGGAAGCATATTGGAGGAGGGCAGGGAAGAGTTAGTGGCTGGTCTCTTCCCTCGAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp TGTTCCTGCCAGAGAGACTGTTCTAGAGGCAAGCAGTaGAGATACAGAAGGCATTGTCCTCACCTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: CSCQRDCSRGKQ*RYRRHCPHLPS
Trigger: GGACGGCAGGTGAGGACAATGCCTTCTGTATCTCCACTGCTTGCCTCTAGAACAGTCTCTCTGGCAGGAACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp AAGCCTTCCTTTCTCACTAGACCATCCTGTACCGCATaGAATCCCACGCAATCCCACCCCACAGTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: KPSFLTRPSCTA*NPTQSHPTVLP
Trigger: AGGGAGAACTGTGGGGTGGGATTGCGTGGGATTCCATGCGGTACAGGATGGTCTAGTGAGAAAGGAAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp CTGTTTCCCCCATGGCTCCTGGCATTTACAGAGAGGTaGGTTATATGGCTTCTGTGGGACAGCGGATTGGAG +
Preference number: 6 (lower is better)
Translates to: LFPPWLLAFTER*VIWLLWDSGLE
Trigger: CTCCAATCCGCTGTCCCACAGAAGCCATATAACCCACCTCTCTGTAAATGCCAGGAGCCATGGGGGAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615386.4
ENST00000632455.1
CDS CAA 72 bp GCCCAGGACTCCCGTCTCTGGAACCATCTGCAGAACTaGCTCCATAGGCAGAGAATTAGCCCTTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: AQDSRLWNHLQN*LHRQRISPFSL
Trigger: CAAGGAGAAAGGGCTAATTCTCTGCCTATGGAGCAAGTTCTGCAGATGGTTCCAGAGACGGGAGTCCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS CAA 72 bp GAGAGGTGGGTTATATGGCTTCTGTGGGACAGCGGATaGGAGACGATAGATTCAGAGGCCAACAGCACGAGG +
Preference number: 6 (lower is better)
Translates to: ERWVIWLLWDSG*ETIDSEANSTR
Trigger: CCTCGTGCTGTTGGCCTCTGAATCTATCGTCTCCAATCCGCTGTCCCACAGAAGCCATATAACCCACCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615386.4
ENST00000632455.1
CDS CAA 90 bp CCCTCACCAGGTGCCCTGAGATTGCCCTCCAGGATAAGCCTTGTTTaGCATGGACCGAGGGGTGCAAGGAATTCCTGTCTCATATTTGTG +
Preference number: 6 (lower is better)
Translates to: PSPGALRLPSRISLV*HGPRGARNSCLIFV
Trigger: CACAAATATGAGACAGGAATTCCTTGCACCCCTCGGTCCATGCAAAACAAGGCTTATCCTGGAGGGCAATCTCAGGGCACCTGGTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 72 bp GAGGACGTCCCATCCTCTGATACCATAGGTCTCCTCTaGTCTCTGCATTACTCCTCCTCCCCAAGTTTAGCC +
Preference number: 6 (lower is better)
Translates to: EDVPSSDTIGLL*SLHYSSSPSLA
Trigger: GGCTAAACTTGGGGAGGAGGAGTAATGCAGAGATCAGAGGAGACCTATGGTATCAGAGGATGGGACGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000485138.5
ENST00000619250.1
ENST00000632149.1
ENST00000632381.1
CDS TCA 72 bp CTGCAGAGCACACCATTCTCCCTATGTCTGTGCCCATaGAGCTCTTTCCTTCTAGAATCCAACTCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: LQSTPFSLCLCP*SSFLLESNSPS
Trigger: GCTGGGGGAGTTGGATTCTAGAAGGAAAGAGCTTCATGGGCACAGACATAGGGAGAATGGTGTGCTCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp TCCCCTTGCAGGCAATTTCAGCATCCTTCTGGGAAGTaGCCACCCAAAGAAGAGTCATTGCTCTGGACACCT +
Preference number: 6 (lower is better)
Translates to: SPCRQFQHPSGK*PPKEESLLWTP
Trigger: AGGTGTCCAGAGCAATGACTCTTCTTTGGGTGGGCACTTCCCAGAAGGATGCTGAAATTGCCTGCAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp GGACGGGTTTTGAAGGTATCCGGCCCAGCCATTACTTaGAATAACCTCATATGCCCACAAGGGGACAGCACA +
Preference number: 6 (lower is better)
Translates to: GRVLKVSGPAIT*NNLICPQGDST
Trigger: TGTGCTGTCCCCTTGTGGGCATATGAGGTTATTGCAAGTAATGGCTGGGCCGGATACCTTCAAAACCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp ACATGTGCTTACCTGCTAACCAGTTTACCCCTGGAGTaGTCCTGTTTGACCCTCACCAGGTGCCCTGAGATT +
Preference number: 6 (lower is better)
Translates to: TCAYLLTSLPLE*SCLTLTRCPEI
Trigger: AATCTCAGGGCACCTGGTGAGGGTCAAACAGGACCACTCCAGGGGTAAACTGGTTAGCAGGTAAGCACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp CCCATGCCTTCTCTTTGGTTGACGGCACAGATTAGGAAACTCCCCTaGCAGGCAATTTCAGCATCCTTCTGGGAAGTGCCCACCCAAAGA +
Preference number: 6 (lower is better)
Translates to: PMPSLWLTAQIRKLP*QAISASFWEVPTQR
Trigger: TCTTTGGGTGGGCACTTCCCAGAAGGATGCTGAAATTGCCTGCAAGGGGAGTTTCCTAATCTGTGCCGTCAACCAAAGAGAAGGCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp GAAGCCAGTGAGGACGACCTACTCTCTAACAACAATGCCATTCTGTaGCCCCAAGATGTCATCAGCCAAACATGTGCTCCAGTCCCCACT +
Preference number: 6 (lower is better)
Translates to: EASEDDLLSNNNAIL*PQDVISQTCAPVPT
Trigger: AGTGGGGACTGGAGCACATGTTTGGCTGATGACATCTTGGGGCAACAGAATGGCATTGTTGTTAGAGAGTAGGTCGTCCTCACTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp CTGGAAACAGTGAGCATACCTAGTTGTGGAGGGAGAGGCCCTGGCTaGACTCCATTATTATACACAGATGTGTGTGCCTCAGCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: LETVSIPSCGGRGPG*TPLLYTDVCASAAG
Trigger: TCCTGCTGCTGAGGCACACACATCTGTGTATAATAATGGAGTCAAGCCAGGGCCTCTCCCTCCACAACTAGGTATGCTCACTGTTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp TGTAACACTGTGTTTCCCAGGGAGTCCTGGAACCATCTGCAGAACTaGCTCCATAGGCAGAGAATTAGCCCTTTCTCCTTGGGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: CNTVFPRESWNHLQN*LHRQRISPFSLGSD
Trigger: GTCACTGCCCAAGGAGAAAGGGCTAATTCTCTGCCTATGGAGCAAGTTCTGCAGATGGTTCCAGGACTCCCTGGGAAACACAGTGTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632330.1
CDS TCA 72 bp CAAGGGGGAGATGACCTGGAGGACACGGGAGAAAGTTaGGAGCTCGACTTGGATCCCAGCAATGTAGATTTA +
Preference number: 6 (lower is better)
Translates to: QGGDDLEDTGES*ELDLDPSNVDL
Trigger: TAAATCTACATTGCTGGGATCCAAGTCGAGCTCTCAACTTTCTCCCGTGTCCTCCAGGTCATCTCCCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 72 bp AACAAGCATCACCTTCCCTCCAAATTGCTCCTTAGATaGCAAAGTGCCAGCACATGGGCTGGAGTGGGGTTC +
Preference number: 6 (lower is better)
Translates to: NKHHLPSKLLLR*QSASTWAGVGF
Trigger: GAACCCCACTCCAGCCCATGTGCTGGCACTTTGTCATCTAAGGAGCAATTTGGAGGGAAGGTGATGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp ATCCTTCTGGGAAGTGCCCACCCAAAGAAGAGTCATTaGTCTGGACACCTGATATCCAGCAAGAAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: ILLGSAHPKKSH*SGHLISSKKKA
Trigger: GGCCTTCTTCTTGCTGGATATCAGGTGTCCAGAGCAATGACTCTTCTTTGGGTGGGCACTTCCCAGAAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp TTCAGGTACGGAGGGGAGGAGTTCTATGTAGACATGTaGTTACCTGCTAACCAGTTTACCCCTGGAGTGGTC +
Preference number: 6 (lower is better)
Translates to: FRYGGEEFYVDM*LPANQFTPGVV
Trigger: GACCACTCCAGGGGTAAACTGGTTAGCAGGTAAGCACATGTCTACATAGAACTCCTCCCCTCCGTACCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp TGTTTCCCAGGGAGTCCTGGAACCATCTGCAGAACTTaGTCCATAGGCAGAGAATTAGCCCTTTCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: CFPGSPGTICRT*SIGRELALSPW
Trigger: CCAAGGAGAAAGGGCTAATTCTCTGCCTATGGAGCAAGTTCTGCAGATGGTTCCAGGACTCCCTGGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632330.1
CDS CCA 72 bp AGGAAACTCCCCTTGCAGGCAATTTCAGCATCCTTCTaGGAAGTGCCCACCCAAAGAAGAGTCATTGCTCTG +
Preference number: 6 (lower is better)
Translates to: RKLPLQAISASF*EVPTQRRVIAL
Trigger: CAGAGCAATGACTCTTCTTTGGGTGGGCACTTCCCAGAAGGATGCTGAAATTGCCTGCAAGGGGAGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp CATCCTTCTGGGAAGTGCCCACCCAAAGAAGAGTCATaGCTCTGGACACCTGATATCCAGCAAGAAGAAGGC +
Preference number: 6 (lower is better)
Translates to: HPSGKCPPKEES*LWTPDIQQEEG
Trigger: GCCTTCTTCTTGCTGGATATCAGGTGTCCAGAGCAATGACTCTTCTTTGGGTGGGCACTTCCCAGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp TCTCTTTGGTTGACGGCACAGATTAGGAAACTCCCCTaGCAGGCAATTTCAGCATCCTTCTGGGAAGTGCCC +
Preference number: 6 (lower is better)
Translates to: SLWLTAQIRKLP*QAISASFWEVP
Trigger: GGGCACTTCCCAGAAGGATGCTGAAATTGCCTGCAAGGGGAGTTTCCTAATCTGTGCCGTCAACCAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp GTGTTTCCCAGGGAGTCCTGGAACCATCTGCAGAACTaGCTCCATAGGCAGAGAATTAGCCCTTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: VFPRESWNHLQN*LHRQRISPFSL
Trigger: CAAGGAGAAAGGGCTAATTCTCTGCCTATGGAGCAAGTTCTGCAGATGGTTCCAGGACTCCCTGGGAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632330.1
CDS CAA 90 bp TCCTCATACTTGAGCAACTTGTTCAGGGCCTGGACATCATTATCTTaGGCAGCTAGAAGGAGAGGAGACTCCCAGATCCTCTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SSYLSNLFRAWTSLS*AARRRGDSQILFCC
Trigger: GCAGCAGAAGAGGATCTGGGAGTCTCCTCTCCTTCTAGCTGCCAAAGATAATGATGTCCAGGCCCTGAACAAGTTGCTCAAGTATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS CAA 90 bp GAATCCCACGCAATCCCACCCCACAGTTCTCCCTGTGAGTCCCCTTaGGAACAAATTCAACTTCACCATTTACTTGCTCTAGGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: ESHAIPPHSSPCESP*EQIQLHHLLALGFW
Trigger: CCAGAACCCTAGAGCAAGTAAATGGTGAAGTTGAATTTGTTCCAAAGGGGACTCACAGGGAGAACTGTGGGGTGGGATTGCGTGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp CTCCAGCTCATGTTCCTGGCAATGGGGATGAGAAAGCCAAAGTGGTaGTTTAGAGATTTGGAATCGGCTGCCATCCTAAGTGCCACAGCT +
Preference number: 6 (lower is better)
Translates to: LQLMFLAMGMRKPKW*FRDLESAAILSATA
Trigger: AGCTGTGGCACTTAGGATGGCAGCCGATTCCAAATCTCTAAACAACCACTTTGGCTTTCTCATCCCCATTGCCAGGAACATGAGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 72 bp CCGATTTTTCTCACCTCTGGAGGACGTCCCATCCTCTaGTACCATAGGTCTCCTCTGATCTCTGCATTACTC +
Preference number: 6 (lower is better)
Translates to: PIFLTSGGRPIL*YHRSPLISALL
Trigger: GAGTAATGCAGAGATCAGAGGAGACCTATGGTATCAGAGGATGGGACGTCCTCCAGAGGTGAGAAAAATCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000485138.5
ENST00000619250.1
ENST00000632149.1
ENST00000632381.1
CDS TCA 72 bp TTGGCAGCTAGAAGGAGAGGAGACTCCCAGATCCTATaGAGGGATGGAATAGGAAAGCTGGAAACAGTGAGC +
Preference number: 6 (lower is better)
Translates to: LAARRRGDSQIL*RDGIGKLETVS
Trigger: GCTCACTGTTTCCAGCTTTCCTATTCCATCCCTTCATAGGATCTGGGAGTCTCCTCTCCTTCTAGCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp CTCCAGGATAAGCCTTGTTTTGCATGGACCGAGGGGTaGAAGGAATTCCTGTCTCATATTTGTGGAGGGAGT +
Preference number: 6 (lower is better)
Translates to: LQDKPCFAWTEG*KEFLSHICGGS
Trigger: ACTCCCTCCACAAATATGAGACAGGAATTCCTTGCACCCCTCGGTCCATGCAAAACAAGGCTTATCCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp TCTGGGAAGTGCCCACCCAAAGAAGAGTCATTGCTCTaGACACCTGATATCCAGCAAGAAGAAGGCCAAGAA +
Preference number: 6 (lower is better)
Translates to: SGKCPPKEESLL*TPDIQQEEGQE
Trigger: TTCTTGGCCTTCTTCTTGCTGGATATCAGGTGTCCAGAGCAATGACTCTTCTTTGGGTGGGCACTTCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp CAAATTCAACTTCACCATTTACTTGCTCTAGGGTTCTaGGCCTGCCCCATTCATAGGGGGATAACAGGACCC +
Preference number: 6 (lower is better)
Translates to: QIQLHHLLALGF*ACPIHRGITGP
Trigger: GGGTCCTGTTATCCCCCTATGAATGGGGCAGGCCCAGAACCCTAGAGCAAGTAAATGGTGAAGTTGAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp CTGGATCAGCAGCAGCACATGAGCCCTTATAAGAAATaGAAATGCTCTGGCGGACCCTTCCACCTAGTGAAT +
Preference number: 6 (lower is better)
Translates to: LDQQQHMSPYKK*KCSGGPFHLVN
Trigger: ATTCACTAGGTGGAAGGGTCCGCCAGAGCATTTCCATTTCTTATAAGGGCTCATGTGCTGCTGCTGATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp CTTCTCACATCATCTCAACAGCCTTCCTTCTTAAAGTaGACCCCTGGATCAGCAGCAGCACATGAGCCCTTA +
Preference number: 6 (lower is better)
Translates to: LLTSSQQPSFLK*TPGSAAAHEPL
Trigger: TAAGGGCTCATGTGCTGCTGCTGATCCAGGGGTCCACTTTAAGAAGGAAGGCTGTTGAGATGATGTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp TTGAGCAACTTGTTCAGGGCCTGGACATCATTATCTTaGGCAGCTAGAAGGAGAGGAGACTCCCAGATCCTC +
Preference number: 6 (lower is better)
Translates to: LSNLFRAWTSLS*AARRRGDSQIL
Trigger: GAGGATCTGGGAGTCTCCTCTCCTTCTAGCTGCCAAAGATAATGATGTCCAGGCCCTGAACAAGTTGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS CAA 72 bp GTGAGCATACCTAGTTGTGGAGGGAGAGGCCCTGGCTaGACTCCATTATTATACACAGATGTGTGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: VSIPSCGGRGPG*TPLLYTDVCAS
Trigger: TGAGGCACACACATCTGTGTATAATAATGGAGTCAAGCCAGGGCCTCTCCCTCCACAACTAGGTATGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp TTCCTGGCAATGGGGATGAGAAAGCCAAAGTGGTTGTTTAGAGATTaGGAATCGGCTGCCATCCTAAGTGCCACAGCTCCTTTTGTGCAC +
Preference number: 6 (lower is better)
Translates to: FLAMGMRKPKWLFRD*ESAAILSATAPFVH
Trigger: GTGCACAAAAGGAGCTGTGGCACTTAGGATGGCAGCCGATTCCAAATCTCTAAACAACCACTTTGGCTTTCTCATCCCCATTGCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 72 bp TGGCTCCTCTCTGGTGCACCTTGCAATCCTCATACTTaGGCAACTTGTTCAGGGCCTGGACATCATTATCTT +
Preference number: 6 (lower is better)
Translates to: WLLSGAPCNPHT*ATCSGPGHHYL
Trigger: AAGATAATGATGTCCAGGCCCTGAACAAGTTGCTCAAGTATGAGGATTGCAAGGTGCACCAGAGAGGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS TCA 72 bp ACCCAGGAAAATGAGAGCAAGTTCCAGGAAGCGAAGTaGGAACACGCAGTCAGATCTGATATTCCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: TQENESKFQEAK*EHAVRSDIPSS
Trigger: AGAGCTGGGAATATCAGATCTGACTGCGTGTTCTCACTTCGCTTCCTGGAACTTGCTCTCATTTTCCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359396.9
ENST00000485138.5
ENST00000611485.2
ENST00000615386.4
ENST00000632330.1
ENST00000632381.1
ENST00000632455.1
CDS GCA 72 bp TCCATCCTGGTCCCTTCATCTCAATATCACCAGCTCTaGAGTGCTCCAAACTTTGGGTTTTTACGGTCCCTA +
Preference number: 6 (lower is better)
Translates to: SILVPSSQYHQL*SAPNFGFLRSL
Trigger: TAGGGACCGTAAAAACCCAAAGTTTGGAGCACTGCAGAGCTGGTGATATTGAGATGAAGGGACCAGGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485138.5
ENST00000632381.1
CDS GCA 72 bp AGGACGACCTACTCTCTAACAACAATGCCATTCTGTTaGCCCAAGATGTCATCAGCCAAACATGTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: RTTYSLTTMPFC*PKMSSAKHVLQ
Trigger: CTGGAGCACATGTTTGGCTGATGACATCTTGGGGCAACAGAATGGCATTGTTGTTAGAGAGTAGGTCGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp ATGGCTCCTCTCTGGTGCACCTTGCAATCCTCATACTaGAGCAACTTGTTCAGGGCCTGGACATCATTATCT +
Preference number: 6 (lower is better)
Translates to: MAPLWCTLQSSY*SNLFRAWTSLS
Trigger: AGATAATGATGTCCAGGCCCTGAACAAGTTGCTCAAGTATGAGGATTGCAAGGTGCACCAGAGAGGAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359396.9
ENST00000611485.2
CDS CAA 72 bp CAGCTGATTCCTGGGCATATGAAAGTTGGAGAAGCATaGCTTAAGTGGTCCTTGCATGCAAAAACCGGTGGC +
Preference number: 6 (lower is better)
Translates to: QLIPGHMKVGEA*LKWSLHAKTGG
Trigger: GCCACCGGTTTTTGCATGCAAGGACCACTTAAGCAATGCTTCTCCAACTTTCATATGCCCAGGAATCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp TTGAGCAACTTGTTCAGGGCCTGGACATCATTATCTTaGGCAGCTAGAAGGAGAGGAGACTCCCAGATCCTA +
Preference number: 6 (lower is better)
Translates to: LSNLFRAWTSLS*AARRRGDSQIL
Trigger: TAGGATCTGGGAGTCTCCTCTCCTTCTAGCTGCCAAAGATAATGATGTCCAGGCCCTGAACAAGTTGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp CAATTTCAGCATCCTTCTGGGAAGTGCCCACCCAAAGAAGAGTCATaGCTCTGGACACCTGATATCCAGCAAGAAGAAGGCCAAGAAAGT +
Preference number: 6 (lower is better)
Translates to: QFQHPSGKCPPKEES*LWTPDIQQEEGQES
Trigger: ACTTTCTTGGCCTTCTTCTTGCTGGATATCAGGTGTCCAGAGCAATGACTCTTCTTTGGGTGGGCACTTCCCAGAAGGATGCTGAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp AACCCAACTAAGGGGTTCCTGGCACAAAATCTAGCACATTATTTCTaGAGCAAACAGATCAATGACCTCCTTCTCAGGGCTGCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: NPTKGFLAQNLAHYF*SKQINDLLLRAASG
Trigger: CCCAGAGGCAGCCCTGAGAAGGAGGTCATTGATCTGTTTGCTCAAGAAATAATGTGCTAGATTTTGTGCCAGGAACCCCTTAGTTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp TTGTTTTGCATGGACCGAGGGGTGCAAGGAATTCCTGTCTCATATTaGTGGAGGGAGTCATATGCACAGGCTAGCAGGATTTCTCCTGTT +
Preference number: 6 (lower is better)
Translates to: LFCMDRGVQGIPVSY*WRESYAQASRISPV
Trigger: AACAGGAGAAATCCTGCTAGCCTGTGCATATGACTCCCTCCACAAATATGAGACAGGAATTCCTTGCACCCCTCGGTCCATGCAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp ATTCCTGGGCATATGAAAGTTGGAGAAGCATTGCTTAAGTGGTCCTaGCATGCAAAAACCGGTGGCGATAAATCAGAGACAAGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: IPGHMKVGEALLKWS*HAKTGGDKSETSSG
Trigger: CCCTGAGCTTGTCTCTGATTTATCGCCACCGGTTTTTGCATGCAAGGACCACTTAAGCAATGCTTCTCCAACTTTCATATGCCCAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 72 bp GTAACCACAGTGGGAGGGGTTGAAAAATTTCTGAGTTaGGAATGGGATCTAAGCATCAGGGATCGCGTTCAC +
Preference number: 6 (lower is better)
Translates to: VTTVGGVEKFLS*EWDLSIRDRVH
Trigger: GTGAACGCGATCCCTGATGCTTAGATCCCATTCTCAACTCAGAAATTTTTCAACCCCTCCCACTGTGGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474388.1
ENST00000619250.1
ENST00000631384.1
ENST00000632149.1
CDS GCA 72 bp CCTGGTCCCTTCATCTCAATATCACCAGCTCTGCAGTaGTCCAAACTTTGGGTTTTTACGGTCCCTAGTTTT +
Preference number: 6 (lower is better)
Translates to: PGPFISISPALQ*SKLWVFTVPSF
Trigger: AAAACTAGGGACCGTAAAAACCCAAAGTTTGGAGCACTGCAGAGCTGGTGATATTGAGATGAAGGGACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485138.5
ENST00000632381.1
CDS GCA 72 bp CCCGCCAATTGTTCATTGTGTCTTCTGCACTGCCTATaGCTAGAAATACACCTAGGATGGTGTAGATGCTCA +
Preference number: 6 (lower is better)
Translates to: PANCSLCLLHCL*LEIHLGWCRCS
Trigger: TGAGCATCTACACCATCCTAGGTGTATTTCTAGGCATAGGCAGTGCAGAAGACACAATGAACAATTGGCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp AAGCACCAAGAAACGTCCACTGTAAAAAGAGGAGTTTaGGTTCCCGATCATCCTGGAGAGACTCAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: KHQETSTVKRGV*VPDHPGETQSL
Trigger: AAGGCTTTGAGTCTCTCCAGGATGATCGGGAACCCAAACTCCTCTTTTTACAGTGGACGTTTCTTGGTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CCA 72 bp CCTCCATTCCCTATGAATTCTGACACTCTAGTGGCCTaGGGAAAACAAAAAGCTACTGTCAGACCCAGAGTT +
Preference number: 6 (lower is better)
Translates to: PPFPMNSDTLVA*GKQKATVRPRV
Trigger: AACTCTGGGTCTGACAGTAGCTTTTTGTTTTCCCCAGGCCACTAGAGTGTCAGAATTCATAGGGAATGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp GCAATCCCACCCCACAGTTCTCCCTGTGAGTCCCCTTaGGAACAAATTCAACTTCACCATTTACTTGCTCTA +
Preference number: 6 (lower is better)
Translates to: AIPPHSSPCESP*EQIQLHHLLAL
Trigger: TAGAGCAAGTAAATGGTGAAGTTGAATTTGTTCCAAAGGGGACTCACAGGGAGAACTGTGGGGTGGGATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp GCTAAGGATAAGGAACACAGAAGCTCTTTAAGGTCTTaGTGCAACTACTTTTCCACCCTCTGCACGTCCCAC +
Preference number: 6 (lower is better)
Translates to: AKDKEHRSSLRS*CNYFSTLCTSH
Trigger: GTGGGACGTGCAGAGGGTGGAAAAGTAGTTGCACAAAGACCTTAAAGAGCTTCTGTGTTCCTTATCCTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp TCAGTTCAGCATGGAAAGCTCTCTCTTCATTCAGTCCCTACCTCCTaGCTCCTGCTAACCCTCATTAATTCAAGTCTTCATTCTCTAGCC +
Preference number: 6 (lower is better)
Translates to: SVQHGKLSLHSVPTS*LLLTLINSSLHSLA
Trigger: GGCTAGAGAATGAAGACTTGAATTAATGAGGGTTAGCAGGAGCAAGGAGGTAGGGACTGAATGAAGAGAGAGCTTTCCATGCTGAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 72 bp TCTTACCTCTCTGGTGCACCTTGCAATCCTCATACTTaGGCAACTTGTTCAGGGCCTGGACATCATTATCTT +
Preference number: 6 (lower is better)
Translates to: SYLSGAPCNPHT*ATCSGPGHHYL
Trigger: AAGATAATGATGTCCAGGCCCTGAACAAGTTGCTCAAGTATGAGGATTGCAAGGTGCACCAGAGAGGTAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615386.4
ENST00000632455.1
CDS CAA 72 bp TTCTTACCTCTCTGGTGCACCTTGCAATCCTCATACTaGAGCAACTTGTTCAGGGCCTGGACATCATTATCT +
Preference number: 6 (lower is better)
Translates to: FLPLWCTLQSSY*SNLFRAWTSLS
Trigger: AGATAATGATGTCCAGGCCCTGAACAAGTTGCTCAAGTATGAGGATTGCAAGGTGCACCAGAGAGGTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615386.4
ENST00000632455.1
CDS TCA 72 bp TTAGAACTTACCCCAACTAAGACACATGGGTCCCTTTaGTTCAATTTTCTCTTGGCCTGGAGCCATTTGGTC +
Preference number: 6 (lower is better)
Translates to: LELTPTKTHGSL*FNFLLAWSHLV
Trigger: GACCAAATGGCTCCAGGCCAAGAGAAAATTGAATCAAAGGGACCCATGTGTCTTAGTTGGGGTAAGTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 90 bp CAGCAGCAGGAACCTCAGGGTCTTCAATCAAGGCAGGTGGGGCCATaGATGTCTTTTCTCTTTACAGTCAGTAAATACAATCAACTTTTT +
Preference number: 6 (lower is better)
Translates to: QQQEPQGLQSRQVGP*MSFLFTVSKYNQLF
Trigger: AAAAAGTTGATTGTATTTACTGACTGTAAAGAGAAAAGACATCAATGGCCCCACCTGCCTTGATTGAAGACCCTGAGGTTCCTGCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS GCA 72 bp AGGGGTCTCAGTTTCCAAACAGCTCACATTAAAGTTTaGGAAACAGTGTTCTCCATCATTTTCAGACCAGCT +
Preference number: 6 (lower is better)
Translates to: RGLSFQTAHIKV*ETVFSIIFRPA
Trigger: AGCTGGTCTGAAAATGATGGAGAACACTGTTTCGCAAACTTTAATGTGAGCTGTTTGGAAACTGAGACCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp CATATGAAAGTTGGAGAAGCATTGCTTAAGTGGTCCTaGCATGCAAAAACCGGTGGCGATAAATCAGAGACA +
Preference number: 6 (lower is better)
Translates to: HMKVGEALLKWS*HAKTGGDKSET
Trigger: TGTCTCTGATTTATCGCCACCGGTTTTTGCATGCAAGGACCACTTAAGCAATGCTTCTCCAACTTTCATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS TCA 72 bp TACCCAATTTGGGATTCATGGATCCGTTTATTTTGCTaGGTCAGATTAGTCTCTCCTTATTATCCACTTCTC +
Preference number: 6 (lower is better)
Translates to: YPIWDSWIRLFC*VRLVSPYYPLL
Trigger: GAGAAGTGGATAATAAGGAGAGACTAATCTGACTCAGCAAAATAAACGGATCCATGAATCCCAAATTGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615386.4
CDS CAA 72 bp GATTTACCCAATTTGGGATTCATGGATCCGTTTATTTaGCTGAGTCAGATTAGTCTCTCCTTATTATCCACT +
Preference number: 6 (lower is better)
Translates to: DLPNLGFMDPFI*LSQISLSLLST
Trigger: AGTGGATAATAAGGAGAGACTAATCTGACTCAGCAAAATAAACGGATCCATGAATCCCAAATTGGGTAAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615386.4