RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPV5 (Homo sapiens)

Ensembl gene IDs: ENSG00000127412, ENSG00000274348

Ensembl transcript IDs: ENST00000265310.6, ENST00000439304.5, ENST00000442623.1, ENST00000621710.2, ENST00000633067.1, ENST00000633909.1

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTAGGAGCCTACACCTGCTGGAACCCAGAGCGTGGCATCGTCCCTaGGTAGCATGGCTTCGTTTCCAGCACCATCACCCCTTGATGCAA +
Preference number: 1 (lower is better)
Translates to: FRSLHLLEPRAWHRP*VAWLRFQHHHPLMQ
Trigger: TTGCATCAAGGGGTGATGGTGCTGGAAACGAAGCCATGCTACTCAGGGACGATGCCACGCTCTGGGTTCCAGCAGGTGTAGGCTCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR CCA 90 bp GCAGAGTGTCTGACAGGCAGTCAGACAGCTGACACATTATTCCCATaGGCCCATATAGACAGCACACAGAAGAGGGTGCAGGCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: AECLTGSQTADTLFP*AHIDSTQKRVQASR
Trigger: CCTGCTGGCCTGCACCCTCTTCTGTGTGCTGTCTATATGGGCCCATGGGAATAATGTGTCAGCTGTCTGACTGCCTGTCAGACACTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR CCA 90 bp TTAAACCCCATCTGTGGCCTCCTGGTCTCATGTCTAATTTCTACCTaGGTGTTTAGGAGCCTACACCTGCTGGAACCCAGAGCGTGGCAT +
Preference number: 1 (lower is better)
Translates to: LNPICGLLVSCLIST*VFRSLHLLEPRAWH
Trigger: ATGCCACGCTCTGGGTTCCAGCAGGTGTAGGCTCCTAAACACCCAGGTAGAAATTAGACATGAGACCAGGAGGCCACAGATGGGGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR TCA 90 bp ATCCAGACATCCTTCTGCAGAGTGTCTGACAGGCAGTCAGACAGCTaGCACATTATTCCCATGGGCCCATATAGACAGCACACAGAAGAG +
Preference number: 1 (lower is better)
Translates to: IQTSFCRVSDRQSDS*HIIPMGPYRQHTEE
Trigger: CTCTTCTGTGTGCTGTCTATATGGGCCCATGGGAATAATGTGTCAGCTGTCTGACTGCCTGTCAGACACTCTGCAGAAGGATGTCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR TCA 90 bp CGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCTGATGTaGAGTGTGAGGCATGACCCTTTAGGGATTGTTCTGTCTCACCCT +
Preference number: 1 (lower is better)
Translates to: RETIDDHCPLPEILM*SVRHDPLGIVLSHP
Trigger: AGGGTGAGACAGAACAATCCCTAAAGGGTCATGCCTCACACTTCACATCAGAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
3UTR CCA 90 bp GCCAAGCACTCTTTCAAAGTTTGTGTGAGAAAATCCACAGCTCCCTaGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: AKHSFKVCVRKSTAP*TNALVLIKPHLWPP
Trigger: AGGAGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATTTTCTCACACAAACTTTGAAAGAGTGCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR TCA 90 bp AAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTGTaGGAAAATCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTA +
Preference number: 1 (lower is better)
Translates to: KSTGLLMPSTLSKFV*ENPQLPGQMLLCSL
Trigger: TAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATTTTCTCACACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR TCA 90 bp CTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCCTGGTCGCGTGGCATCGTCCCTaGGTAGCATGGCTTCGTTTC +
Preference number: 2 (lower is better)
Translates to: LPGQMLLCSLNPICGLLVAWHRP*VAWLRF
Trigger: GAAACGAAGCCATGCTACTCAGGGACGATGCCACGC...GACCAGGAGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR GCA 90 bp CTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCCTGGTCTTAGGAGCCTACACCTaGTGGAACCCAGAGCGTGGC +
Preference number: 2 (lower is better)
Translates to: LPGQMLLCSLNPICGLLVLGAYT*WNPERG
Trigger: GCCACGCTCTGGGTTCCAGCAGGTGTAGGCTCCTAA...GACCAGGAGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR CCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTGGAGCCTACACCTGCTaGAACCCAGAGCGTGGCATC +
Preference number: 2 (lower is better)
Translates to: STAPWTNALVLIKPHLWPGAYTC*NPERGI
Trigger: GATGCCACGCTCTGGGTTCCAGCAGGTGTAGGCTCC...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR TCA 90 bp GGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCTGCCTTGTCTCACCCTCCCATaGTTAACAGGCACAGAAGTT +
Preference number: 2 (lower is better)
Translates to: GCVGQKRNGPDINLASLPCLTLP*LTGTEV
Trigger: AACTTCTGTGCCTGTTAATCATGGGAGGGTGAGACA...AGGCAGGGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
3UTR-3UTR GCA 90 bp TCTAGGGGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCAGAAGTTAGACACTTaGATAGGCAGAGGTCTCCGT +
Preference number: 2 (lower is better)
Translates to: SRGCVGQKRNGPDINLASQKLDT*IGRGLR
Trigger: ACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTG...GGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCCCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
3UTR CAA 90 bp TACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCCTaGGCCACCACAACACAGAATGGCAGGCCCACAACACTAAATGGA +
Preference number: 2 (lower is better)
Translates to: YCVPRISPLPNPSFP*ATTTQNGRPTTLNG
Trigger: TCCATTTAGTGTTGTGGGCCTGCCATTCTGTGTTGTGGTGGCCAAGGGAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR CCA 90 bp CTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCCTGGTCTGTCTAATTTCTACCTaGGTGTTTAGGAGCCTACAC +
Preference number: 2 (lower is better)
Translates to: LPGQMLLCSLNPICGLLVCLIST*VFRSLH
Trigger: GTGTAGGCTCCTAAACACCCAGGTAGAAATTAGACA...GACCAGGAGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR GCA 90 bp TCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGACAGAAGTTAGACACTTaGATAGGCAGAGGTCTCCGT +
Preference number: 2 (lower is better)
Translates to: SLVANLLFPEMGDLQEPRQKLDT*IGRGLR
Trigger: ACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTG...TCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
3UTR CAA 90 bp CTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTaGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCC +
Preference number: 2 (lower is better)
Translates to: LMSLVANLLFPEMGD*QEPRKYVRQSMTIA
Trigger: GGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
3UTR-3UTR GCA 90 bp AATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTGTTTAGGAGCCTACACCTaGTGGAACCCAGAGCGTGGC +
Preference number: 2 (lower is better)
Translates to: NFTKAQAYSCQALFQSLCLGAYT*WNPERG
Trigger: GCCACGCTCTGGGTTCCAGCAGGTGTAGGCTCCTAA...ACACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR TCA 90 bp AGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTTGTCTCACCCTCCCATaGTTAACAGGCACAGAAGTT +
Preference number: 2 (lower is better)
Translates to: RAQKIRETIDDHCPLPEICLTLP*LTGTEV
Trigger: AACTTCTGTGCCTGTTAATCATGGGAGGGTGAGACA...AATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
3UTR-3UTR CCA 90 bp CTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCATTAAACCCCATCTGTaGCCTCCTGGTCTCATGTCT +
Preference number: 2 (lower is better)
Translates to: LNGASESIYFSLIPNPDIIKPHL*PPGLMS
Trigger: AGACATGAGACCAGGAGGCCACAGATGGGGTTTAAT...GATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR CCA 90 bp ACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATATTAAACCCCATCTGTaGCCTCCTGGTCTCATGTCT +
Preference number: 2 (lower is better)
Translates to: TKWSLREYLLQPDTQSRHIKPHL*PPGLMS
Trigger: AGACATGAGACCAGGAGGCCACAGATGGGGTTTAAT...ATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR TCA 90 bp CTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTTCAAAGTTTGTGTaGGAAAATCCACAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: LNGASESIYFSLIPNPDILSKFV*ENPQLP
Trigger: AGGGAGCTGTGGATTTTCTCACACAAACTTTGAAAG...GATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR CCA 90 bp AATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTTGTCTAATTTCTACCTaGGTGTTTAGGAGCCTACAC +
Preference number: 2 (lower is better)
Translates to: NGASESIYFSLIPNPDILCLIST*VFRSLH
Trigger: GTGTAGGCTCCTAAACACCCAGGTAGAAATTAGACA...AAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR CCA 90 bp TTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCCCACCACAACACAGAATaGCAGGCCCACAACACTAAA +
Preference number: 2 (lower is better)
Translates to: FYIYCVPRISPLPNPSFPHHNTE*QAHNTK
Trigger: TTTAGTGTTGTGGGCCTGCCATTCTGTGTTGTGGTG...GGGAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR CCA 90 bp AAAATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTAAATCCACAGCTCCCTaGACAAATGCTCTTGTGCTC +
Preference number: 2 (lower is better)
Translates to: KISQKHRLTHAKHSFKVCKSTAP*TNALVL
Trigger: GAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATTT...ACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR TCA 90 bp ACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCAATTTTCCTCCTTTTaGGCAATAGAGTTTACCTTG +
Preference number: 2 (lower is better)
Translates to: TKWSLREYLLQPDTQSRHQFSSF*AIEFTL
Trigger: CAAGGTAAACTCTATTGCTCAAAAGGAGGAAAATTG...ATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR CCA 90 bp TTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCCACTCAGAAATGGACTTaGAGCACAATTTTCCTCCTT +
Preference number: 2 (lower is better)
Translates to: FYIYCVPRISPLPNPSFPTQKWT*STIFLL
Trigger: AAGGAGGAAAATTGTGCTCCAAGTCCATTTCTGAGT...GGGAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR TCA 72 bp CTACACCTGCTGGAACCCAGAGCGTGGCATCGTCCCTaGGTAGCATGGCTTCGTTTCCAGCACCATCACCCC +
Preference number: 3 (lower is better)
Translates to: LHLLEPRAWHRP*VAWLRFQHHHP
Trigger: GGGGTGATGGTGCTGGAAACGAAGCCATGCTACTCAGGGACGATGCCACGCTCTGGGTTCCAGCAGGTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR CAA 90 bp TCTAGGGGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCACAGAAGTTAGACACTaGCATAGGCAGAGGTCTCCG +
Preference number: 3 (lower is better)
Translates to: SRGCVGQKRNGPDINLASTEVRH*HRQRSP
Trigger: CGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGT...GGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCCCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
3UTR TCA 72 bp TCCTTCTGCAGAGTGTCTGACAGGCAGTCAGACAGCTaGCACATTATTCCCATGGGCCCATATAGACAGCAC +
Preference number: 3 (lower is better)
Translates to: SFCRVSDRQSDS*HIIPMGPYRQH
Trigger: GTGCTGTCTATATGGGCCCATGGGAATAATGTGTCAGCTGTCTGACTGCCTGTCAGACACTCTGCAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR CCA 72 bp ATCTGTGGCCTCCTGGTCTCATGTCTAATTTCTACCTaGGTGTTTAGGAGCCTACACCTGCTGGAACCCAGA +
Preference number: 3 (lower is better)
Translates to: ICGLLVSCLIST*VFRSLHLLEPR
Trigger: TCTGGGTTCCAGCAGGTGTAGGCTCCTAAACACCCAGGTAGAAATTAGACATGAGACCAGGAGGCCACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR TCA 72 bp CTGATACCCAATCCAGACATCCTTCTGCAGAGTGTCTaGCAGGCAGTCAGACAGCTGACACATTATTCCCAT +
Preference number: 3 (lower is better)
Translates to: LIPNPDILLQSV*QAVRQLTHYSH
Trigger: ATGGGAATAATGTGTCAGCTGTCTGACTGCCTGTCAGACACTCTGCAGAAGGATGTCTGGATTGGGTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR CCA 72 bp TCTTTCAAAGTTTGTGTGAGAAAATCCACAGCTCCCTaGACAAATGCTCTTGTGCTCATTAAACCCCATCTG +
Preference number: 3 (lower is better)
Translates to: SFKVCVRKSTAP*TNALVLIKPHL
Trigger: CAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATTTTCTCACACAAACTTTGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR-3UTR CAA 90 bp ATTTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCGCAGGGCTGTCTGTGTaGCCCAAATACAACAAAAAT +
Preference number: 3 (lower is better)
Translates to: ISIFTVYLESVLFLTLVFAGLSV*PKYNKN
Trigger: ATTTTTGTTGTATTTGGGCAACACAGACAGCCCTGC...GAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGGAGGGCAGAAGTTTCTaGAGTTGGCTCCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RSPSLSPPPGQPGVRSRVEGRSF*SWLPGP
Trigger: AGGGCCCGGGAGCCAACTCCAGAAACTTCTGCCCTC...CACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAGAGACGGAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCAGCTCATCCCTCTCCTaGGCCACCCTCCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GTEVRHLHRQRSPSLSPPSSSLS*ATLQWV
Trigger: CACCCACTGGAGGGTGGCCCAGGAGAGGGATGAGCT...GGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp AGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGTTCTGCTGCAGCATATaGAGCTTGTCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSPSLSPPPGQPGVRSRVFCCSI*SLSRCW
Trigger: CCAGCACCTGGACAAGCTTCATATGCTGCAGCAGAA...CACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAGAGACGGAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp AGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGCAACTGAGCAAGAGATaGGGTCTATTTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSPSLSPPPGQPGVRSRVQLSKR*GLFGAG
Trigger: CCCAGCCCCAAATAGACCCCATCTCTTGCTCAGTTG...CACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAGAGACGGAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAACCTCTATGCCATGCCTaGCTCTTCCCACGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: VRHLHRQRSPSLSPPPGQPLCHA*LFPRKP
Trigger: GGGCTTACGTGGGAAGAGCCAGGCATGGCATAGAGG...TTGGCCTGGGGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAAGTGATGTCTCGAGAATaGGTGCGGTTGCCACCACGA +
Preference number: 4 (lower is better)
Translates to: VRHLHRQRSPSLSPPPGQVMSRE*VRLPPR
Trigger: TCGTGGTGGCAACCGCACTCATTCTCGAGACATCAC...TTGGCCTGGGGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAATCTCTAGGAGCAGGATaGTCACAGCCCCAACGATGC +
Preference number: 4 (lower is better)
Translates to: VRHLHRQRSPSLSPPPGQSLGAG*SQPQRC
Trigger: GCATCGTTGGGGCTGTGATCATCCTGCTCCTAGAGA...TTGGCCTGGGGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAATTCTGCTGCAGCATATaGAGCTTGTCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VRHLHRQRSPSLSPPPGQFCCSI*SLSRCW
Trigger: CCAGCACCTGGACAAGCTTCATATGCTGCAGCAGAA...TTGGCCTGGGGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp AGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGCCTCTGTCTGGAAAATaGTATAGAACGCGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RSPSLSPPPGQPGVRSRVPLSGK*YRTRRQ
Trigger: TTGCCTCCGCGTTCTATATCATTTTCCAGACAGAGG...CACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAGAGACGGAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGAGCCTCGGTGACTGCTaGTCTGGGACGCGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLSLGDC*SGTRSG
Trigger: CCCGGACCGCGTCCCAGAGCAGCAGTCACCGAGGCT...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp ACCCAGAGCGTGGCATCGTCCCTGAGTAGCATGGCTTCGTTTCCAGCACCATCAAGAAGTTTCTGGAGTTaGCTCCCGGGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TQSVASSLSSMASFPAPSRSFWS*LPGPSA
Trigger: GGCAGAAGGGCCCGGGAGCCAACTCCAGAAACTTCT...TGATGGTGCTGGAAACGAAGCCATGCTACTCAGGGACGATGCCACGCTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp CTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGATAGCGATGTTACCCAGTCTTGTTCTCTaGCCAGAAAGGAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LSPPPGQPGVRSRVIAMLPSLVL*PERRAE
Trigger: TTCTGCCCTCCTTTCTGGTCAGAGAACAAGACTGGG...TAACATCGCTATCACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TTAACAGGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCATCTCCCAGCCTCGGTaGCTGCTGCTCTGGGACGCG +
Preference number: 4 (lower is better)
Translates to: LTGTEVRHLHRQRSPSLSISQPR*LLLWDA
Trigger: CGCGTCCCAGAGCAGCAGTCACCGAGGCTGGGAGAT...GGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCCTGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCGCAGTATGTGGGTTGTaGGGTGTGCGTGTATGCACA +
Preference number: 4 (lower is better)
Translates to: GTEVRHLHRQRSPSLSPPAVCGL*GVRVCT
Trigger: TGTGCATACACGCACACCCCACAACCCACATACTGC...GGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAAGGGTCTATTTGGGGCTaGGACTCTGAGTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: VRHLHRQRSPSLSPPPGQGSIWG*DSEFIS
Trigger: GGAGATAAACTCAGAGTCCCAGCCCCAAATAGACCC...TTGGCCTGGGGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGATAGCGATGTTAAGCTTGTCCAGGTGCTaGTCCCAGTCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSPPPGQPGVRSRVIAMLSLSRC*SQSCSL
Trigger: CAGAGAACAAGACTGGGACCAGCACCTGGACAAGCT...TAACATCGCTATCACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp ACCCAGAGCGTGGCATCGTCCCTGAGTAGCATGGCTTCGTTTCCAGCACCATCAGTGTGTGTGTGTGCATaGAGTATGTGGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TQSVASSLSSMASFPAPSVCVCA*SMWVVG
Trigger: CCCCACAACCCACATACTGCATGCACACACACACAC...TGATGGTGCTGGAAACGAAGCCATGCTACTCAGGGACGATGCCACGCTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp CTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGATAGCGATGTTAGGGTCTATTTGGGGCTaGGACTCTGAGTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: LSPPPGQPGVRSRVIAMLGSIWG*DSEFIS
Trigger: GGAGATAAACTCAGAGTCCCAGCCCCAAATAGACCC...TAACATCGCTATCACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp ACCCAGAGCGTGGCATCGTCCCTGAGTAGCATGGCTTCGTTTCCAGCACCATCACAACTGAGCAAGAGATaGGGTCTATTTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TQSVASSLSSMASFPAPSQLSKR*GLFGAG
Trigger: CCCAGCCCCAAATAGACCCCATCTCTTGCTCAGTTG...TGATGGTGCTGGAAACGAAGCCATGCTACTCAGGGACGATGCCACGCTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTGAGGGCAGAAGTTTCTaGAGTTGGCTCCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: STAPWTNALVLIKPHLWPEGRSF*SWLPGP
Trigger: AGGGCCCGGGAGCCAACTCCAGAAACTTCTGCCCTC...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGAGCTCATCCCTCTCCTaGGCCACCCTCCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLSSSLS*ATLQWV
Trigger: CACCCACTGGAGGGTGGCCCAGGAGAGGGATGAGCT...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGGTGGTGGCCACGACCTaGGCCCTCCAGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LQEPRKYVRQSMTIAHCQVVATT*ALQSSS
Trigger: GGATGAGCTCTGGAGGGCCCAGGTCGTGGCCACCAC...CTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCCCTCTGTCTGGAAAATaGTATAGAACGCGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: GTEVRHLHRQRSPSLSPPPLSGK*YRTRRQ
Trigger: TTGCCTCCGCGTTCTATATCATTTTCCAGACAGAGG...GGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGATCTCCCAGCCTCGGTaGCTGCTGCTCTGGGACGCG +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSISQPR*LLLWDA
Trigger: CGCGTCCCAGAGCAGCAGTCACCGAGGCTGGGAGAT...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp AGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTAGCCTCGGTGACTGCTaGTCTGGGACGCGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RAQKIRETIDDHCPLPEISLGDC*SGTRSG
Trigger: CCCGGACCGCGTCCCAGAGCAGCAGTCACCGAGGCT...AATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TTAACAGGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCGAGGGCAGAAGTTTCTaGAGTTGGCTCCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LTGTEVRHLHRQRSPSLSEGRSF*SWLPGP
Trigger: AGGGCCCGGGAGCCAACTCCAGAAACTTCTGCCCTC...GGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCCTGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCACAGGTCATTTTCCTTaGATGCTCGAAGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GTEVRHLHRQRSPSLSPPTGHFP*MLEAVE
Trigger: CTCCACTGCTTCGAGCATCCAAGGAAAATGACCTGT...GGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGGTGGTGGCCACGACCTaGGCCCTCCAGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSVVATT*ALQSSS
Trigger: GGATGAGCTCTGGAGGGCCCAGGTCGTGGCCACCAC...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp CTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCCTGGTCTTCTGCTGCAGCATATaGAGCTTGTCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPGQMLLCSLNPICGLLVFCCSI*SLSRCW
Trigger: CCAGCACCTGGACAAGCTTCATATGCTGCAGCAGAA...GACCAGGAGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCCCCATTGGTGTTGGTaGGCCGCATCACCATGGTCA +
Preference number: 4 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLPHWCW*AASPWS
Trigger: TGACCATGGTGATGCGGCTCACCAACACCAATGGGG...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp AATCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCACAAGGCAGCCAGGATaGAGAAGTACGGCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: NPQLPGQMLLCSLNPICGTRQPG*RSTAGH
Trigger: ATGGCCGGCCGTACTTCTGCATCCTGGCTGCCTTGT...GCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp CTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAAGTGTGTGCATGCAGGTaGGCTGAGGGGACTGACCGC +
Preference number: 4 (lower is better)
Translates to: LLFPEMGDLQEPRKYVRQVCACR*AEGTDR
Trigger: GCGGTCAGTCCCCTCAGCGCACCTGCATGCACACAC...TTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621710.2
CDS-3UTR CCA 90 bp GTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAATCTCCTTGCAGACACTaGCAGATTATAGAAATGTGG +
Preference number: 4 (lower is better)
Translates to: VRHLHRQRSPSLSPPPGQSPCRH*QIIEMW
Trigger: CCACATTTCTATAATCTGCCAGTGTCTGCAAGGAGA...TTGGCCTGGGGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGATAGCGATGTTAGTCTGTTCCAGAATTTaGCGAGCCTCTCGTTTATCA +
Preference number: 4 (lower is better)
Translates to: LSPPPGQPGVRSRVIAMLVCSRI*RASRLS
Trigger: TGATAAACGAGAGGCTCGCCAAATTCTGGAACAGAC...TAACATCGCTATCACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCTGCCTGGGCTGTTTCTCAGATaGATGCTCCTGGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GCVGQKRNGPDINLASLPGLFLR*MLLVIL
Trigger: GAGGATGACCAGGAGCATCCATCTGAGAAACAGCCC...AGGCAGGGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCTGCCTTTTCTAGGGGCTGCGTaGGGCAGAAGAGAAATGGTC +
Preference number: 4 (lower is better)
Translates to: GCVGQKRNGPDINLASLPFLGAA*GRREMV
Trigger: GACCATTTCTCTTCTGCCCCACGCAGCCCCTAGAAA...AGGCAGGGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp AGCGTGGCATCGTCCCTGAGTAGCATGGCTTCGTTTCCAGCACCATCACCCCTTATTAAACCCCATCTGTaGCCTCCTGGTCTCATGTCT +
Preference number: 4 (lower is better)
Translates to: SVASSLSSMASFPAPSPLIKPHL*PPGLMS
Trigger: AGACATGAGACCAGGAGGCCACAGATGGGGTTTAAT...AAGGGGTGATGGTGCTGGAAACGAAGCCATGCTACTCAGGGACGATGCCACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCCCAGTCTTGTTCTCTaGCCAGAAAGGAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: STAPWTNALVLIKPHLWPPSLVL*PERRAE
Trigger: TTCTGCCCTCCTTTCTGGTCAGAGAACAAGACTGGG...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGTCTCTAGGAGCAGGATaGTCACAGCCCCAACGATGC +
Preference number: 4 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLSLGAG*SQPQRC
Trigger: GCATCGTTGGGGCTGTGATCATCCTGCTCCTAGAGA...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGTGCCCCAGGGTGTTTTaGCGAAGGATCTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LQEPRKYVRQSMTIAHCQCPRVF*RRISQP
Trigger: AGGCTGGGAGATCCTTCGTCAAAACACCCTGGGGCA...CTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGATGCCCCAGGGTGTTTTaGCGAAGGATCTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLVANLLFPEMGDLQEPRCPRVF*RRISQP
Trigger: AGGCTGGGAGATCCTTCGTCAAAACACCCTGGGGCA...TCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp TCTAGGGGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCGTGTGTGTGTGTGCATaGAGTATGTGGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRGCVGQKRNGPDINLASVCVCA*SMWVVG
Trigger: CCCCACAACCCACATACTGCATGCACACACACACAC...GGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCCCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp AGACATCCTTCTGCAGAGTGTCTGACAGGCAGTCAGACAGCTGACACATTATTCACAAGGCAGCCAGGATaGAGAAGTACGGCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: RHPSAECLTGSQTADTLFTRQPG*RSTAGH
Trigger: ATGGCCGGCCGTACTTCTGCATCCTGGCTGCCTTGT...GAATAATGTGTCAGCTGTCTGACTGCCTGTCAGACACTCTGCAGAAGGATGTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp GGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCACAATCGATGACCATTaGCCATTGCCAGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: GTEVRHLHRQRSPSLSPPTIDDH*PLPEIL
Trigger: CAGAATTTCTGGCAATGGGCAATGGTCATCGATTGT...GGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTGCAGTATGTGGGTTGTaGGGTGTGCGTGTATGCACA +
Preference number: 4 (lower is better)
Translates to: STAPWTNALVLIKPHLWPAVCGL*GVRVCT
Trigger: TGTGCATACACGCACACCCCACAACCCACATACTGC...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp TCTAGGGGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCTTTCTAGGGGCTGCGTaGGGCAGAAGAGAAATGGTC +
Preference number: 4 (lower is better)
Translates to: SRGCVGQKRNGPDINLASFLGAA*GRREMV
Trigger: GACCATTTCTCTTCTGCCCCACGCAGCCCCTAGAAA...GGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCCCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TCTAGGGGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCTTGGGGCTGGGACTCTaGGTTTATCTCCTGTATGAC +
Preference number: 4 (lower is better)
Translates to: SRGCVGQKRNGPDINLASLGLGL*VYLLYD
Trigger: GTCATACAGGAGATAAACTCAGAGTCCCAGCCCCAA...GGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCCCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCCCCCATTGGTGTTGGTaGGCCGCATCACCATGGTCA +
Preference number: 4 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFPHWCW*AASPWS
Trigger: TGACCATGGTGATGCGGCTCACCAACACCAATGGGG...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCTGCCTGTCATCCTCCTTGTCTaGGTTCTTGAACACTTCCAC +
Preference number: 4 (lower is better)
Translates to: GCVGQKRNGPDINLASLPVILLV*VLEHFH
Trigger: GTGGAAGTGTTCAAGAACTCAGACAAGGAGGATGAC...AGGCAGGGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp CTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCCTGGTCTCTCTCATCCCCTTCTaGGGAGAATCACCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: LPGQMLLCSLNPICGLLVSLIPF*GESPVV
Trigger: TACTACAGGTGATTCTCCTCAGAAGGGGATGAGAGA...GACCAGGAGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp AATCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCGTGTGTGTGTGTGCATaGAGTATGTGGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: NPQLPGQMLLCSLNPICGVCVCA*SMWVVG
Trigger: CCCCACAACCCACATACTGCATGCACACACACACAC...GCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCAGTGCAGTCTGACCTaGAAAAGCCTCACATGTGGT +
Preference number: 4 (lower is better)
Translates to: STAPWTNALVLIKPHLWPQCSLT*KSLTCG
Trigger: ACCACATGTGAGGCTTTTGCAGGTCAGACTGCACTG...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGACAAGGCAGCCAGGATaGAGAAGTACGGCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSTRQPG*RSTAGH
Trigger: ATGGCCGGCCGTACTTCTGCATCCTGGCTGCCTTGT...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp TGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAAACAAGGCAGCCAGGATaGAGAAGTACGGCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: CLMSLVANLLFPEMGDLQTRQPG*RSTAGH
Trigger: ATGGCCGGCCGTACTTCTGCATCCTGGCTGCCTTGT...TTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp TGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAAGGGCCACAACCTCTATaGCATGCCTGGCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: CLMSLVANLLFPEMGDLQGPQPL*HAWLFP
Trigger: TGGGAAGAGCCAGGCATGGCATAGAGGTTGTGGCCC...TTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGGGGCCACAACCTCTATaGCATGCCTGGCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSGPQPL*HAWLFP
Trigger: TGGGAAGAGCCAGGCATGGCATAGAGGTTGTGGCCC...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTGAGATGGGGTCTATTTaGGGCTGGGACTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: STAPWTNALVLIKPHLWPEMGSI*GWDSEF
Trigger: AAACTCAGAGTCCCAGCCCCAAATAGACCCCATCTC...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AACCCCATCTGTGGCCTCCTGGTCTCATGTCTAATTTCTACCTGGGTGTTTAGGCAACTGAGCAAGAGATaGGGTCTATTTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NPICGLLVSCLISTWVFRQLSKR*GLFGAG
Trigger: CCCAGCCCCAAATAGACCCCATCTCTTGCTCAGTTG...CCTAAACACCCAGGTAGAAATTAGACATGAGACCAGGAGGCCACAGATGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp TGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAAAGAAGTTTCTGGAGTTaGCTCCCGGGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CLMSLVANLLFPEMGDLQRSFWS*LPGPSA
Trigger: GGCAGAAGGGCCCGGGAGCCAACTCCAGAAACTTCT...TTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGAGAAGTTTCTGGAGTTaGCTCCCGGGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSRSFWS*LPGPSA
Trigger: GGCAGAAGGGCCCGGGAGCCAACTCCAGAAACTTCT...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GCCCACAACACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAAAGAAGTTTCTGGAGTTaGCTCCCGGGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: AHNTKWSLREYLLQPDTQRSFWS*LPGPSA
Trigger: GGCAGAAGGGCCCGGGAGCCAACTCCAGAAACTTCT...TTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGTGTTGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTGAGGGCAGAAGTTTCTaGAGTTGGCTCCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: NGASESIYFSLIPNPDILEGRSF*SWLPGP
Trigger: AGGGCCCGGGAGCCAACTCCAGAAACTTCTGCCCTC...AAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp CTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCCTGGTCTTCTGCATCAGGTGCTaGAACATCACAGTGTTACCC +
Preference number: 4 (lower is better)
Translates to: LPGQMLLCSLNPICGLLVFCIRC*NITVLP
Trigger: GGGTAACACTGTGATGTTCCAGCACCTGATGCAGAA...GACCAGGAGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCTGCCTAAGGGACCCAGCATCTaGAATCCTCGAGTGAAATAC +
Preference number: 4 (lower is better)
Translates to: GCVGQKRNGPDINLASLPKGPSI*NPRVKY
Trigger: GTATTTCACTCGAGGATTCCAGATGCTGGGTCCCTT...AGGCAGGGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TCTAGGGGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCTTGCCCCAGACTGGTTaGGTCCTCTGTCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SRGCVGQKRNGPDINLASLPQTG*VLCLEN
Trigger: ATTTTCCAGACAGAGGACCCAACCAGTCTGGGGCAA...GGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCCCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCGAGCCAAAGAGGCTCTaGCTAGAGTCCCACTCTCAG +
Preference number: 4 (lower is better)
Translates to: DLQEPRKYVRQSMTIAHCEPKRL*LESHSQ
Trigger: CTGAGAGTGGGACTCTAGCCAGAGCCTCTTTGGCTC...GCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAACCTCTATGCCATGCCTaGCTCTTCCCACGTAAGCCC +
Preference number: 4 (lower is better)
Translates to: LLFPEMGDLQEPRKYVRQPLCHA*LFPRKP
Trigger: GGGCTTACGTGGGAAGAGCCAGGCATGGCATAGAGG...TTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp AGCGTGGCATCGTCCCTGAGTAGCATGGCTTCGTTTCCAGCACCATCACCCCTTGCCCACAACACTAAATaGAGCCTCAGAGAGTATTTA +
Preference number: 4 (lower is better)
Translates to: SVASSLSSMASFPAPSPLAHNTK*SLREYL
Trigger: TAAATACTCTCTGAGGCTCCATTTAGTGTTGTGGGC...AAGGGGTGATGGTGCTGGAAACGAAGCCATGCTACTCAGGGACGATGCCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp CTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCCTGGTCCACCACAACACAGAATaGCAGGCCCACAACACTAAA +
Preference number: 4 (lower is better)
Translates to: LPGQMLLCSLNPICGLLVHHNTE*QAHNTK
Trigger: TTTAGTGTTGTGGGCCTGCCATTCTGTGTTGTGGTG...GACCAGGAGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp AACCCCATCTGTGGCCTCCTGGTCTCATGTCTAATTTCTACCTGGGTGTTTAGGTTGGGGCTGGGACTCTaGGTTTATCTCCTGTATGAC +
Preference number: 4 (lower is better)
Translates to: NPICGLLVSCLISTWVFRLGLGL*VYLLYD
Trigger: GTCATACAGGAGATAAACTCAGAGTCCCAGCCCCAA...CCTAAACACCCAGGTAGAAATTAGACATGAGACCAGGAGGCCACAGATGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp AGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTCTGCAGTGATGTCTCGAGAATaGGTGCGGTTGCCACCACGA +
Preference number: 4 (lower is better)
Translates to: SLREYLLQPDTQSRHPSAVMSRE*VRLPPR
Trigger: TCGTGGTGGCAACCGCACTCATTCTCGAGACATCAC...TGCAGAAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGGAGAGGCACCAACCCTaGAGATGTCTGGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLERHQP*RCLESL
Trigger: TAGAGATTCCAGACATCTTCAGGGTTGGTGCCTCTC...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TCTAGGGGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCTGTCTCACCCTCCCATaGTTAACAGGCACAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SRGCVGQKRNGPDINLASCLTLP*LTGTEV
Trigger: AACTTCTGTGCCTGTTAATCATGGGAGGGTGAGACA...GGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCCCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp AACCCCATCTGTGGCCTCCTGGTCTCATGTCTAATTTCTACCTGGGTGTTTAGGAGCACCATCACCCCTTaGTGCAATTCTCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: NPICGLLVSCLISTWVFRSTITP*CNSLSS
Trigger: GGATGAGAGAGAATTGCATCAAGGGGTGATGGTGCT...CCTAAACACCCAGGTAGAAATTAGACATGAGACCAGGAGGCCACAGATGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp AGACATCCTTCTGCAGAGTGTCTGACAGGCAGTCAGACAGCTGACACATTATTCAGGCAGTCAGACAGCTaGCACATTATTCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: RHPSAECLTGSQTADTLFRQSDS*HIIPMG
Trigger: GCCCATGGGAATAATGTGTCAGCTGTCTGACTGCCT...GAATAATGTGTCAGCTGTCTGACTGCCTGTCAGACACTCTGCAGAAGGATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp GACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCGTCGAACGTCACAGGTaGAGTCCAGTAGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: DLQEPRKYVRQSMTIAHCVERHR*SPVEVA
Trigger: GGCAACTTCTACTGGACTGCACCTGTGACGTTCGAC...GCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp AATGGCAGGCCCACAACACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGGTCGAACGTCACAGGTaGAGTCCAGTAGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: NGRPTTLNGASESIYFSLVERHR*SPVEVA
Trigger: GGCAACTTCTACTGGACTGCACCTGTGACGTTCGAC...CAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGTGTTGTGGGCCTGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAGTGCAGTCTGACCTaGAAAAGCCTCACATGTGGT +
Preference number: 4 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLQCSLT*KSLTCG
Trigger: ACCACATGTGAGGCTTTTGCAGGTCAGACTGCACTG...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp AATCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCAGTGCAGTCTGACCTaGAAAAGCCTCACATGTGGT +
Preference number: 4 (lower is better)
Translates to: NPQLPGQMLLCSLNPICGQCSLT*KSLTCG
Trigger: ACCACATGTGAGGCTTTTGCAGGTCAGACTGCACTG...GCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp AATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTTTAGGAGCCTACACCTaGTGGAACCCAGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: NGASESIYFSLIPNPDILLGAYT*WNPERG
Trigger: GCCACGCTCTGGGTTCCAGCAGGTGTAGGCTCCTAA...AAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AACCCCATCTGTGGCCTCCTGGTCTCATGTCTAATTTCTACCTGGGTGTTTAGGGAGATGGGGTCTATTTaGGGCTGGGACTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: NPICGLLVSCLISTWVFREMGSI*GWDSEF
Trigger: AAACTCAGAGTCCCAGCCCCAAATAGACCCCATCTC...CCTAAACACCCAGGTAGAAATTAGACATGAGACCAGGAGGCCACAGATGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AATGGCAGGCCCACAACACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGAGCTTGTCCAGGTGCTaGTCCCAGTCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NGRPTTLNGASESIYFSLSLSRC*SQSCSL
Trigger: CAGAGAACAAGACTGGGACCAGCACCTGGACAAGCT...CAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGTGTTGTGGGCCTGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp TTAACAGGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCTCAGATGGATGCTCCTaGTCATCCTCCTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LTGTEVRHLHRQRSPSLSSDGCS*SSSLSE
Trigger: CTCAGACAAGGAGGATGACCAGGAGCATCCATCTGA...GGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCCTGTTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGTTCCCACGTAAGCCCTaGGGAGCCAGAAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSFPRKP*GARKAS
Trigger: TGAGGCTTTTCTGGCTCCCCAGGGCTTACGTGGGAA...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp ACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATGGAGCCTACACCTGCTaGAACCCAGAGCGTGGCATC +
Preference number: 4 (lower is better)
Translates to: TKWSLREYLLQPDTQSRHGAYTC*NPERGI
Trigger: GATGCCACGCTCTGGGTTCCAGCAGGTGTAGGCTCC...ATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp CTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAACCCAGTCTTGTTCTCTaGCCAGAAAGGAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLFPEMGDLQEPRKYVRQPSLVL*PERRAE
Trigger: TTCTGCCCTCCTTTCTGGTCAGAGAACAAGACTGGG...TTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp AATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTGTGATGTCTCGAGAATaGGTGCGGTTGCCACCACGA +
Preference number: 4 (lower is better)
Translates to: NGASESIYFSLIPNPDILVMSRE*VRLPPR
Trigger: TCGTGGTGGCAACCGCACTCATTCTCGAGACATCAC...AAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp TCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGATTTGCTGGAGGATGGTaGTGTCTCGAGAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: SLVANLLFPEMGDLQEPRFAGGW*CLENEC
Trigger: GCACTCATTCTCGAGACATCACCATCCTCCAGCAAA...TCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGGAGAGGCACCAACCCTaGAGATGTCTGGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: LQEPRKYVRQSMTIAHCQERHQP*RCLESL
Trigger: TAGAGATTCCAGACATCTTCAGGGTTGGTGCCTCTC...CTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TCTAGGGGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCCTTGTCTGAGTTCTTaGACACTTCCACATAGCGAA +
Preference number: 4 (lower is better)
Translates to: SRGCVGQKRNGPDINLASPCLSS*TLPHSE
Trigger: TTCGCTATGTGGAAGTGTTCAAGAACTCAGACAAGG...GGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCCCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp ACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATGCGTGGCATCGTCCCTaGGTAGCATGGCTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: TKWSLREYLLQPDTQSRHAWHRP*VAWLRF
Trigger: GAAACGAAGCCATGCTACTCAGGGACGATGCCACGC...ATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp ACCCAGAGCGTGGCATCGTCCCTGAGTAGCATGGCTTCGTTTCCAGCACCATCACAATTTTCCTCCTTTTaGGCAATAGAGTTTACCTTG +
Preference number: 4 (lower is better)
Translates to: TQSVASSLSSMASFPAPSQFSSF*AIEFTL
Trigger: CAAGGTAAACTCTATTGCTCAAAAGGAGGAAAATTG...TGATGGTGCTGGAAACGAAGCCATGCTACTCAGGGACGATGCCACGCTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGGTGTGTGTGTGTGCATaGAGTATGTGGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSVCVCA*SMWVVG
Trigger: CCCCACAACCCACATACTGCATGCACACACACACAC...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp AACCCCATCTGTGGCCTCCTGGTCTCATGTCTAATTTCTACCTGGGTGTTTAGGGTCATTTTCCTTGGATaGTCGAAGCAGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: NPICGLLVSCLISTWVFRVIFLG*SKQWRL
Trigger: GAGTCTCCACTGCTTCGAGCATCCAAGGAAAATGAC...CCTAAACACCCAGGTAGAAATTAGACATGAGACCAGGAGGCCACAGATGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGGTCGAACGTCACAGGTaGAGTCCAGTAGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSVERHR*SPVEVA
Trigger: GGCAACTTCTACTGGACTGCACCTGTGACGTTCGAC...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp TCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGATGTCTCGAGAATGAGTaGGGTTGCCACCACGAAACT +
Preference number: 4 (lower is better)
Translates to: SLVANLLFPEMGDLQEPRCLENE*GCHHET
Trigger: AGTTTCGTGGTGGCAACCGCACTCATTCTCGAGACA...TCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp GGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCTGCCTGTCGTAGTTGGCAGGTaGATCAATAACAGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: GCVGQKRNGPDINLASLPVVVGR*INNSEK
Trigger: TTTCTCACTGTTATTGATGCACCTGCCAACTACGAC...AGGCAGGGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp TTAACAGGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCAGAAGTTAGACACTTaGATAGGCAGAGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LTGTEVRHLHRQRSPSLSQKLDT*IGRGLR
Trigger: ACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTG...GGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCCTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGGCAGTATGTGGGTTGTaGGGTGTGCGTGTATGCACA +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSAVCGL*GVRVCT
Trigger: TGTGCATACACGCACACCCCACAACCCACATACTGC...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATGTGCATGCAGTATGTaGGTTGTGGGGTGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LLFPEMGDLQEPRKYVRQCACSM*VVGCAC
Trigger: ACACGCACACCCCACAACCCACATACTGCATGCACA...TTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCGAGATGGGGTCTATTTaGGGCTGGGACTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: DLQEPRKYVRQSMTIAHCEMGSI*GWDSEF
Trigger: AAACTCAGAGTCCCAGCCCCAAATAGACCCCATCTC...GCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCTGCCTTCTCCTTGCAGACACTaGCAGATTATAGAAATGTGG +
Preference number: 4 (lower is better)
Translates to: GCVGQKRNGPDINLASLPSPCRH*QIIEMW
Trigger: CCACATTTCTATAATCTGCCAGTGTCTGCAAGGAGA...AGGCAGGGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAAAGCTTGTCCAGGTGCTaGTCCCAGTCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LLFPEMGDLQEPRKYVRQSLSRC*SQSCSL
Trigger: CAGAGAACAAGACTGGGACCAGCACCTGGACAAGCT...TTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGTTCTGCATCAGGTGCTaGAACATCACAGTGTTACCC +
Preference number: 4 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLFCIRC*NITVLP
Trigger: GGGTAACACTGTGATGTTCCAGCACCTGATGCAGAA...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGTTGCCCCAGACTGGTTaGGTCCTCTGTCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LQEPRKYVRQSMTIAHCQLPQTG*VLCLEN
Trigger: ATTTTCCAGACAGAGGACCCAACCAGTCTGGGGCAA...CTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGTCAGATGGATGCTCCTaGTCATCCTCCTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LQEPRKYVRQSMTIAHCQSDGCS*SSSLSE
Trigger: CTCAGACAAGGAGGATGACCAGGAGCATCCATCTGA...CTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGGGGCTGTTTCTCAGATaGATGCTCCTGGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSGLFLR*MLLVIL
Trigger: GAGGATGACCAGGAGCATCCATCTGAGAAACAGCCC...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TTAACAGGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCTCCTTTTTCCTGAGATaGGTGACTTGCAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LTGTEVRHLHRQRSPSLSSFFLR*VTCKSP
Trigger: TGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGA...GGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCCTGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTGACACATTATTCCCATaGGCCCATATAGACAGCACA +
Preference number: 4 (lower is better)
Translates to: STAPWTNALVLIKPHLWPDTLFP*AHIDST
Trigger: TGTGCTGTCTATATGGGCCCATGGGAATAATGTGTC...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp TGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAATTGGGGCTGGGACTCTaGGTTTATCTCCTGTATGAC +
Preference number: 4 (lower is better)
Translates to: CLMSLVANLLFPEMGDLQLGLGL*VYLLYD
Trigger: GTCATACAGGAGATAAACTCAGAGTCCCAGCCCCAA...TTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCGAAACAGGTCTAGGATaGCAGCAACTGAGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: DLQEPRKYVRQSMTIAHCETGLG*QQLSKR
Trigger: TCTCTTGCTCAGTTGCTGTCATCCTAGACCTGTTTC...GCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp CTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCTTCTGCTGCAGCATATaGAGCTTGTCCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LNGASESIYFSLIPNPDIFCCSI*SLSRCW
Trigger: CCAGCACCTGGACAAGCTTCATATGCTGCAGCAGAA...GATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp GACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCACTCGCAGAGGATTCTaGTCATTGTGGTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: DLQEPRKYVRQSMTIAHCTRRGF*SLWFST
Trigger: GGTTGAGAACCACAATGATCAGAATCCTCTGCGAGT...GCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TTAACAGGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCTTGTCTGAGTTCTTaGACACTTCCACATAGCGAA +
Preference number: 4 (lower is better)
Translates to: LTGTEVRHLHRQRSPSLSPCLSS*TLPHSE
Trigger: TTCGCTATGTGGAAGTGTTCAAGAACTCAGACAAGG...GGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCCTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCTGTCTCACCCTCCCATaGTTAACAGGCACAGAAGTT +
Preference number: 4 (lower is better)
Translates to: DLQEPRKYVRQSMTIAHCCLTLP*LTGTEV
Trigger: AACTTCTGTGCCTGTTAATCATGGGAGGGTGAGACA...GCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGGTGAAGTGTGAGGCATaGCCCTTTAGGGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: LQEPRKYVRQSMTIAHCQVKCEA*PFRDCS
Trigger: AGAACAATCCCTAAAGGGTCATGCCTCACACTTCAC...CTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCTTTCAAAGTTTGTGTaGGAAAATCCACAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: STAPWTNALVLIKPHLWPLSKFV*ENPQLP
Trigger: AGGGAGCTGTGGATTTTCTCACACAAACTTTGAAAG...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCTGTCTCGAGAATGAGTaGGGTTGCCACCACGAAACT +
Preference number: 4 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFCLENE*GCHHET
Trigger: AGTTTCGTGGTGGCAACCGCACTCATTCTCGAGACA...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp TTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGTGTTTCTCAGATGGATaGTCCTGGTCATCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LQEPRKYVRQSMTIAHCQCFSDG*SWSSSL
Trigger: CAAGGAGGATGACCAGGAGCATCCATCTGAGAAACA...CTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp GACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAGTTAGACACTTaGATAGGCAGAGGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: DLQEPRKYVRQSMTIAHCQKLDT*IGRGLR
Trigger: ACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTG...GCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTACCTGTAGTAGTTTTTaGTGGAGGATGGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: STAPWTNALVLIKPHLWPTCSSF*WRMVMS
Trigger: AGACATCACCATCCTCCAGCAAAAACTACTACAGGT...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTGCAGTATGTGGGTTGTaGGGTGTGCGTGTATGCACA +
Preference number: 4 (lower is better)
Translates to: NGASESIYFSLIPNPDILAVCGL*GVRVCT
Trigger: TGTGCATACACGCACACCCCACAACCCACATACTGC...AAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGGAGATGGGGTCTATTTaGGGCTGGGACTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSEMGSI*GWDSEF
Trigger: AAACTCAGAGTCCCAGCCCCAAATAGACCCCATCTC...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp AGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCAACTGAGCAAGAGATaGGGTCTATTTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RAQKIRETIDDHCPLPEIQLSKR*GLFGAG
Trigger: CCCAGCCCCAAATAGACCCCATCTCTTGCTCAGTTG...AATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAACAGGTCATTTTCCTTaGATGCTCGAAGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: SLVANLLFPEMGDLQEPRTGHFP*MLEAVE
Trigger: CTCCACTGCTTCGAGCATCCAAGGAAAATGACCTGT...TCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCTTCTGCATCAGGTGCTaGAACATCACAGTGTTACCC +
Preference number: 4 (lower is better)
Translates to: DLQEPRKYVRQSMTIAHCFCIRC*NITVLP
Trigger: GGGTAACACTGTGATGTTCCAGCACCTGATGCAGAA...GCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp AATCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCGTCTGTTCCAGAATTTaGCGAGCCTCTCGTTTATCA +
Preference number: 4 (lower is better)
Translates to: NPQLPGQMLLCSLNPICGVCSRI*RASRLS
Trigger: TGATAAACGAGAGGCTCGCCAAATTCTGGAACAGAC...GCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCTGCCTCCAAAAATCATCTTCTaGATCATGATGGTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GCVGQKRNGPDINLASLPPKIIF*IMMVKG
Trigger: TCCCTTCACCATCATGATCCAGAAGATGATTTTTGG...AGGCAGGGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTGCCCACAACACTAAATaGAGCCTCAGAGAGTATTTA +
Preference number: 4 (lower is better)
Translates to: STAPWTNALVLIKPHLWPAHNTK*SLREYL
Trigger: TAAATACTCTCTGAGGCTCCATTTAGTGTTGTGGGC...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp AGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTTTTGCTGGAGGATGGTaGTGTCTCGAGAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: RAQKIRETIDDHCPLPEIFAGGW*CLENEC
Trigger: GCACTCATTCTCGAGACATCACCATCCTCCAGCAAA...AATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCACTCGCAGAGGATTCTaGTCATTGTGGTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFTRRGF*SLWFST
Trigger: GGTTGAGAACCACAATGATCAGAATCCTCTGCGAGT...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCGTCATCCTCCTTGTCTaGGTTCTTGAACACTTCCAC +
Preference number: 4 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFVILLV*VLEHFH
Trigger: GTGGAAGTGTTCAAGAACTCAGACAAGGAGGATGAC...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCGTGAAGTGTGAGGCATaGCCCTTTAGGGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFVKCEA*PFRDCS
Trigger: AGAACAATCCCTAAAGGGTCATGCCTCACACTTCAC...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp AACCCCATCTGTGGCCTCCTGGTCTCATGTCTAATTTCTACCTGGGTGTTTAGGCTTTCAAAGTTTGTGTaGGAAAATCCACAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: NPICGLLVSCLISTWVFRLSKFV*ENPQLP
Trigger: AGGGAGCTGTGGATTTTCTCACACAAACTTTGAAAG...CCTAAACACCCAGGTAGAAATTAGACATGAGACCAGGAGGCCACAGATGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCGTCATTTTCCTTGGATaGTCGAAGCAGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFVIFLG*SKQWRL
Trigger: GAGTCTCCACTGCTTCGAGCATCCAAGGAAAATGAC...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp CTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAAGTCATTTTCCTTGGATaGTCGAAGCAGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: LLFPEMGDLQEPRKYVRQVIFLG*SKQWRL
Trigger: GAGTCTCCACTGCTTCGAGCATCCAAGGAAAATGAC...TTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp AGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCAGTGCAGTCTGACCTaGAAAAGCCTCACATGTGGT +
Preference number: 4 (lower is better)
Translates to: RAQKIRETIDDHCPLPEIQCSLT*KSLTCG
Trigger: ACCACATGTGAGGCTTTTGCAGGTCAGACTGCACTG...AATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp AATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTTGTCTCGAGAATGAGTaGGGTTGCCACCACGAAACT +
Preference number: 4 (lower is better)
Translates to: NGASESIYFSLIPNPDILCLENE*GCHHET
Trigger: AGTTTCGTGGTGGCAACCGCACTCATTCTCGAGACA...AAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGTCCTGTAGTAGTTTTTaGTGGAGGATGGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLSCSSF*WRMVMS
Trigger: AGACATCACCATCCTCCAGCAAAAACTACTACAGGA...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGTGTTTCTCAGATGGATaGTCCTGGTCATCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSCFSDG*SWSSSL
Trigger: CAAGGAGGATGACCAGGAGCATCCATCTGAGAAACA...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGACAATCGATGACCATTaGCCATTGCCAGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLTIDDH*PLPEIL
Trigger: CAGAATTTCTGGCAATGGGCAATGGTCATCGATTGT...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp AACCCCATCTGTGGCCTCCTGGTCTCATGTCTAATTTCTACCTGGGTGTTTAGGACCTGTAGTAGTTTTTaGTGGAGGATGGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: NPICGLLVSCLISTWVFRTCSSF*WRMVMS
Trigger: AGACATCACCATCCTCCAGCAAAAACTACTACAGGT...CCTAAACACCCAGGTAGAAATTAGACATGAGACCAGGAGGCCACAGATGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp CTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCGGGTCTATTTGGGGCTaGGACTCTGAGTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: LNGASESIYFSLIPNPDIGSIWG*DSEFIS
Trigger: GGAGATAAACTCAGAGTCCCAGCCCCAAATAGACCC...GATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGAAGGGACCCAGCATCTaGAATCCTCGAGTGAAATAC +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSKGPSI*NPRVKY
Trigger: GTATTTCACTCGAGGATTCCAGATGCTGGGTCCCTT...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCTCCTTTTTCCTGAGATaGGTGACTTGCAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFSFFLR*VTCKSP
Trigger: TGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGA...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GCCCACAACACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAAATTAAACCCCATCTGTaGCCTCCTGGTCTCATGTCT +
Preference number: 4 (lower is better)
Translates to: AHNTKWSLREYLLQPDTQIKPHL*PPGLMS
Trigger: AGACATGAGACCAGGAGGCCACAGATGGGGTTTAAT...TTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGTGTTGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp TCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTACTCAGAAATGGACTTaGAGCACAATTTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: STAPWTNALVLIKPHLWPTQKWT*STIFLL
Trigger: AAGGAGGAAAATTGTGCTCCAAGTCCATTTCTGAGT...AGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp CTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCTCTCTCATCCCCTTCTaGGGAGAATCACCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: LNGASESIYFSLIPNPDISLIPF*GESPVV
Trigger: TACTACAGGTGATTCTCCTCAGAAGGGGATGAGAGA...GATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp AAAATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTGCGTGGCATCGTCCCTaGGTAGCATGGCTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: KISQKHRLTHAKHSFKVCAWHRP*VAWLRF
Trigger: GAAACGAAGCCATGCTACTCAGGGACGATGCCACGC...ACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp TTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGGTCGTAGTTGGCAGGTaGATCAATAACAGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LQEPRKYVRQSMTIAHCQVVVGR*INNSEK
Trigger: TTTCTCACTGTTATTGATGCACCTGCCAACTACGAC...CTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp AATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTACAGGTCATTTTCCTTaGATGCTCGAAGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: NGASESIYFSLIPNPDILTGHFP*MLEAVE
Trigger: CTCCACTGCTTCGAGCATCCAAGGAAAATGACCTGT...AAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCGTCTGTTCCAGAATTTaGCGAGCCTCTCGTTTATCA +
Preference number: 4 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFVCSRI*RASRLS
Trigger: TGATAAACGAGAGGCTCGCCAAATTCTGGAACAGAC...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp GCCCACAACACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAAGTCTGTTCCAGAATTTaGCGAGCCTCTCGTTTATCA +
Preference number: 4 (lower is better)
Translates to: AHNTKWSLREYLLQPDTQVCSRI*RASRLS
Trigger: TGATAAACGAGAGGCTCGCCAAATTCTGGAACAGAC...TTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGTGTTGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
3UTR CAA 72 bp TTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTaGCAAGAGCCCAGAAAATACGTGAGACAATCGATG +
Preference number: 4 (lower is better)
Translates to: LVANLLFPEMGD*QEPRKYVRQSM
Trigger: CATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR TCA 90 bp TTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCCTTGGGGCTGGGACTCTaGGTTTATCTCCTGTATGAC +
Preference number: 4 (lower is better)
Translates to: FYIYCVPRISPLPNPSFPLGLGL*VYLLYD
Trigger: GTCATACAGGAGATAAACTCAGAGTCCCAGCCCCAA...GGGAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp TTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCCTTTGCTGGAGGATGGTaGTGTCTCGAGAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: FYIYCVPRISPLPNPSFPFAGGW*CLENEC
Trigger: GCACTCATTCTCGAGACATCACCATCCTCCAGCAAA...GGGAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp TTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCCAGCACCATCACCCCTTaGTGCAATTCTCTCTCATCC +
Preference number: 4 (lower is better)
Translates to: FYIYCVPRISPLPNPSFPSTITP*CNSLSS
Trigger: GGATGAGAGAGAATTGCATCAAGGGGTGATGGTGCT...GGGAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp CTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATGTATGACTTGTGTATaGAGCATGCAGCTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: LLFPEMGDLQEPRKYVRQCMTCV*SMQLVG
Trigger: ACCTACAAGCTGCATGCTGCATACACAAGTCATACA...TTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR GCA 90 bp AATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTGTGTCGAACGTCACAGGTaGAGTCCAGTAGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: NFTKAQAYSCQALFQSLCVERHR*SPVEVA
Trigger: GGCAACTTCTACTGGACTGCACCTGTGACGTTCGAC...ACACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp TTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCCTGTCTCGAGAATGAGTaGGGTTGCCACCACGAAACT +
Preference number: 4 (lower is better)
Translates to: FYIYCVPRISPLPNPSFPCLENE*GCHHET
Trigger: AGTTTCGTGGTGGCAACCGCACTCATTCTCGAGACA...GGGAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGTCCTGTAGTAGTTTTTaGTGGAGGATGGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSSCSSF*WRMVMS
Trigger: AGACATCACCATCCTCCAGCAAAAACTACTACAGGA...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp AATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTGTAGCTTGTCCAGGTGCTaGTCCCAGTCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NFTKAQAYSCQALFQSLCSLSRC*SQSCSL
Trigger: CAGAGAACAAGACTGGGACCAGCACCTGGACAAGCT...ACACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp GCCCACAACACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATGTCTAATTTCTACCTaGGTGTTTAGGAGCCTACAC +
Preference number: 4 (lower is better)
Translates to: AHNTKWSLREYLLQPDTQCLIST*VFRSLH
Trigger: GTGTAGGCTCCTAAACACCCAGGTAGAAATTAGACA...TTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGTGTTGTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp ACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATAAATCCACAGCTCCCTaGACAAATGCTCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TKWSLREYLLQPDTQSRHKSTAP*TNALVL
Trigger: GAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATTT...ATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp ATTTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCCCAGTCTTGTTCTCTaGCCAGAAAGGAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ISIFTVYLESVLFLTLVFPSLVL*PERRAE
Trigger: TTCTGCCCTCCTTTCTGGTCAGAGAACAAGACTGGG...GAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp ATTTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCAGGCAGTCAGACAGCTaGCACATTATTCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: ISIFTVYLESVLFLTLVFRQSDS*HIIPMG
Trigger: GCCCATGGGAATAATGTGTCAGCTGTCTGACTGCCT...GAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR GCA 90 bp TGGACTCAGAAATGGACTTGGAGCACAATTTTCCTCCTTTTGAGCAATAGAGTTGTCATTTTCCTTGGATaGTCGAAGCAGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: WTQKWTWSTIFLLLSNRVVIFLG*SKQWRL
Trigger: GAGTCTCCACTGCTTCGAGCATCCAAGGAAAATGAC...AACTCTATTGCTCAAAAGGAGGAAAATTGTGCTCCAAGTCCATTTCTGAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp TGGACTCAGAAATGGACTTGGAGCACAATTTTCCTCCTTTTGAGCAATAGAGTTAAATCCACAGCTCCCTaGACAAATGCTCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: WTQKWTWSTIFLLLSNRVKSTAP*TNALVL
Trigger: GAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATTT...AACTCTATTGCTCAAAAGGAGGAAAATTGTGCTCCAAGTCCATTTCTGAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AAAATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTGGGTCTATTTGGGGCTaGGACTCTGAGTTTATCTCC +
Preference number: 4 (lower is better)
Translates to: KISQKHRLTHAKHSFKVCGSIWG*DSEFIS
Trigger: GGAGATAAACTCAGAGTCCCAGCCCCAAATAGACCC...ACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTGTACAGGTCATTTTCCTTaGATGCTCGAAGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: NFTKAQAYSCQALFQSLCTGHFP*MLEAVE
Trigger: CTCCACTGCTTCGAGCATCCAAGGAAAATGACCTGT...ACACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTGTTTCTGCATCAGGTGCTaGAACATCACAGTGTTACCC +
Preference number: 4 (lower is better)
Translates to: NFTKAQAYSCQALFQSLCFCIRC*NITVLP
Trigger: GGGTAACACTGTGATGTTCCAGCACCTGATGCAGAA...ACACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCCAAAAATCATCTTCTaGATCATGATGGTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RAQKIRETIDDHCPLPEIPKIIF*IMMVKG
Trigger: TCCCTTCACCATCATGATCCAGAAGATGATTTTTGG...AATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CCA 90 bp AGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTCTGCAAAATGGACTCAGAAATaGACTTGGAGCACAATTTTC +
Preference number: 4 (lower is better)
Translates to: SLREYLLQPDTQSRHPSAKWTQK*TWSTIF
Trigger: GAAAATTGTGCTCCAAGTCCATTTCTGAGTCCATTT...TGCAGAAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp TTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCCGACACATTATTCCCATaGGCCCATATAGACAGCACA +
Preference number: 4 (lower is better)
Translates to: FYIYCVPRISPLPNPSFPDTLFP*AHIDST
Trigger: TGTGCTGTCTATATGGGCCCATGGGAATAATGTGTC...GGGAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR TCA 90 bp AATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTCAATTTTCCTCCTTTTaGGCAATAGAGTTTACCTTG +
Preference number: 4 (lower is better)
Translates to: NGASESIYFSLIPNPDILQFSSF*AIEFTL
Trigger: CAAGGTAAACTCTATTGCTCAAAAGGAGGAAAATTG...AAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp TTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCCTCTCCTTGCAGACACTaGCAGATTATAGAAATGTGG +
Preference number: 4 (lower is better)
Translates to: FYIYCVPRISPLPNPSFPSPCRH*QIIEMW
Trigger: CCACATTTCTATAATCTGCCAGTGTCTGCAAGGAGA...GGGAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp TGGACTCAGAAATGGACTTGGAGCACAATTTTCCTCCTTTTGAGCAATAGAGTTTGTCTAATTTCTACCTaGGTGTTTAGGAGCCTACAC +
Preference number: 4 (lower is better)
Translates to: WTQKWTWSTIFLLLSNRVCLIST*VFRSLH
Trigger: GTGTAGGCTCCTAAACACCCAGGTAGAAATTAGACA...AACTCTATTGCTCAAAAGGAGGAAAATTGTGCTCCAAGTCCATTTCTGAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AAAATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTCACCACAACACAGAATaGCAGGCCCACAACACTAAA +
Preference number: 4 (lower is better)
Translates to: KISQKHRLTHAKHSFKVCHHNTE*QAHNTK
Trigger: TTTAGTGTTGTGGGCCTGCCATTCTGTGTTGTGGTG...ACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp ATTTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCTCTCCTTGCAGACACTaGCAGATTATAGAAATGTGG +
Preference number: 4 (lower is better)
Translates to: ISIFTVYLESVLFLTLVFSPCRH*QIIEMW
Trigger: CCACATTTCTATAATCTGCCAGTGTCTGCAAGGAGA...GAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CCA 90 bp AAAATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTAAATGGACTCAGAAATaGACTTGGAGCACAATTTTC +
Preference number: 4 (lower is better)
Translates to: KISQKHRLTHAKHSFKVCKWTQK*TWSTIF
Trigger: GAAAATTGTGCTCCAAGTCCATTTCTGAGTCCATTT...ACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp AGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGGGCACCACCTCCCCATaGGTGTTGGTGAGCCGCATC +
Preference number: 5 (lower is better)
Translates to: RSPSLSPPPGQPGVRSRVGTTSP*VLVSRI
Trigger: GATGCGGCTCACCAACACCAATGGGGAGGTGGTGCC...CACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAGAGACGGAGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS GCA 90 bp GCCCCAGGGTGTTTTGACGAAGGATCTCCCAGCCTCGGTGACTGCTaGTCTGGGACGCGGTCCGGGACAGGGAGGAAGTTGGAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: APGCFDEGSPSLGDC*SGTRSGTGRKLEEP
Trigger: TGGCTCTTCCAACTTCCTCCCTGTCCCGGACCGCGTCCCAGAGCAGCAGTCACCGAGGCTGGGAGATCCTTCGTCAAAACACCCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS GCA 90 bp AGTGCCCCAGGGTGTTTTGACGAAGGATCTCCCAGCCTCGGTGACTaGTGCTCTGGGACGCGGTCCGGGACAGGGAGGAAGTTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SAPGCFDEGSPSLGD*CSGTRSGTGRKLEE
Trigger: CTCTTCCAACTTCCTCCCTGTCCCGGACCGCGTCCCAGAGCAGCAGTCACCGAGGCTGGGAGATCCTTCGTCAAAACACCCTGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS CCA 90 bp ACGCGGTCCGGGACAGGGAGGAAGTTGGAAGAGCCAAAGAGGCTCTaGCTAGAGTCCCACTCTCAGCCCCAGAGGGCTGTTTCTCAGATG +
Preference number: 5 (lower is better)
Translates to: TRSGTGRKLEEPKRL*LESHSQPQRAVSQM
Trigger: CATCTGAGAAACAGCCCTCTGGGGCTGAGAGTGGGACTCTAGCCAGAGCCTCTTTGGCTCTTCCAACTTCCTCCCTGTCCCGGACCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS-3UTR CAA 90 bp CTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGATAGCGATGTTACAGAAGTTTCTGGAGTaGGCTCCCGGGCCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LSPPPGQPGVRSRVIAMLQKFLE*APGPFC
Trigger: GCAGAAGGGCCCGGGAGCCAACTCCAGAAACTTCTG...TAACATCGCTATCACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS TCA 90 bp CAGTGTGTGGCTGTGGTGTATGTGTGTGCATGCAGTGTGTGGTTGTaGGGTGGTGTGTGTGCATGCAGGTGCGCTGAGGGGACTGACCGC +
Preference number: 5 (lower is better)
Translates to: QCVAVVYVCACSVWL*GGVCACRCAEGTDR
Trigger: GCGGTCAGTCCCCTCAGCGCACCTGCATGCACACACACCACCTCACAACCACACACTGCATGCACACACATACACCACAGCCACACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621710.2
CDS-3UTR CAA 90 bp AGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGGGTCTGTTCCAGAATTaGGCGAGCCTCTCGTTTATC +
Preference number: 5 (lower is better)
Translates to: RSPSLSPPPGQPGVRSRVGLFQN*ASLSFI
Trigger: GATAAACGAGAGGCTCGCCAAATTCTGGAACAGACC...CACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAGAGACGGAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp CTGTCCCCGCCCCCAGGCCAACCGGGAGTAAGGTCAAGAGTGATAGCGATGTTACATGCAGTATGTGGGTaGTGGGGTGTGCGTGTATGC +
Preference number: 5 (lower is better)
Translates to: LSPPPGQPGVRSRVIAMLHAVCG*WGVRVC
Trigger: GCATACACGCACACCCCACAACCCACATACTGCATG...TAACATCGCTATCACTCTTGACCTTACTCCCGGTTGGCCTGGGGGCGGGGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp GGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCGGGGTAGTCATAGAATaGCCCCAGACTGGTTGGGTC +
Preference number: 5 (lower is better)
Translates to: GTEVRHLHRQRSPSLSPPGVVIE*PQTGWV
Trigger: GACCCAACCAGTCTGGGGCAATTCTATGACTACCCC...GGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS TCA 90 bp GCAGCATATGAAGCTTGTCCAGGTGCTGGTCCCAGTCTTGTTCTCTaGCCAGAAAGGAGGGCAGAAGTTTCTGGAGTTGGCTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: AAYEACPGAGPSLVL*PERRAEVSGVGSRA
Trigger: GGCCCGGGAGCCAACTCCAGAAACTTCTGCCCTCCTTTCTGGTCAGAGAACAAGACTGGGACCAGCACCTGGACAAGCTTCATATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1
ENST00000633909.1
CDS-3UTR CAA 90 bp GTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCCCAGGCCAACCCCATGTCTTCTCCTaGCAGACACTGGCAGATTAT +
Preference number: 5 (lower is better)
Translates to: VRHLHRQRSPSLSPPPGQPHVFS*QTLADY
Trigger: ATAATCTGCCAGTGTCTGCAAGGAGAAGACATGGGG...TTGGCCTGGGGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp GGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCTGCCTGTGCCCCAGGGTGTTTaGACGAAGGATCTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: GCVGQKRNGPDINLASLPVPQGV*TKDLPA
Trigger: GGCTGGGAGATCCTTCGTCAAAACACCCTGGGGCAC...AGGCAGGGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp GGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCACAGAAGTTAGACACTaGCATAGGCAGAGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: GTEVRHLHRQRSPSLSPPTEVRH*HRQRSP
Trigger: CGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGT...GGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp GGCACAGAAGTTAGACACTTGCATAGGCAGAGGTCTCCGTCTCTGTCCCCGCCCCCTGAGATGGGTGACTaGCAAGAGCCCAGAAAATAC +
Preference number: 5 (lower is better)
Translates to: GTEVRHLHRQRSPSLSPPPEMGD*QEPRKY
Trigger: GTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGG...GGGCGGGGACAGAGACGGAGACCTCTGCCTATGCAAGTGTCTAACTTCTGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp CTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCCTCCTGGTCCATGCAGTATGTGGGTaGTGGGGTGTGCGTGTATGC +
Preference number: 5 (lower is better)
Translates to: LPGQMLLCSLNPICGLLVHAVCG*WGVRVC
Trigger: GCATACACGCACACCCCACAACCCACATACTGCATG...GACCAGGAGGCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp ACCCAGAGCGTGGCATCGTCCCTGAGTAGCATGGCTTCGTTTCCAGCACCATCAGGTCTGTTCCAGAATTaGGCGAGCCTCTCGTTTATC +
Preference number: 5 (lower is better)
Translates to: TQSVASSLSSMASFPAPSGLFQN*ASLSFI
Trigger: GATAAACGAGAGGCTCGCCAAATTCTGGAACAGACC...TGATGGTGCTGGAAACGAAGCCATGCTACTCAGGGACGATGCCACGCTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp TCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAGGCACCACCTCCCCATaGGTGTTGGTGAGCCGCATC +
Preference number: 5 (lower is better)
Translates to: SLVANLLFPEMGDLQEPRGTTSP*VLVSRI
Trigger: GATGCGGCTCACCAACACCAATGGGGAGGTGGTGCC...TCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp AGCGTGGCATCGTCCCTGAGTAGCATGGCTTCGTTTCCAGCACCATCACCCCTTCAGCACCATCACCCCTaGATGCAATTCTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: SVASSLSSMASFPAPSPLQHHHP*MQFSLI
Trigger: GATGAGAGAGAATTGCATCAAGGGGTGATGGTGCTG...AAGGGGTGATGGTGCTGGAAACGAAGCCATGCTACTCAGGGACGATGCCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp TTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGGTGCCCCAGGGTGTTTaGACGAAGGATCTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LQEPRKYVRQSMTIAHCQVPQGV*TKDLPA
Trigger: GGCTGGGAGATCCTTCGTCAAAACACCCTGGGGCAC...CTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGCCCCAGGGCTCCTCTTaGTCGAACGTCACAGGTGCA +
Preference number: 5 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSPQGSS*SNVTGA
Trigger: TGCACCTGTGACGTTCGACAAAGAGGAGCCCTGGGG...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGTACGGCCGGCCATACTaGTTCCACTTGAAGCTCACC +
Preference number: 5 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLYGRPY*FHLKLT
Trigger: GGTGAGCTTCAAGTGGAACAAGTATGGCCGGCCGTA...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp CTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCAGAAGTTTCTGGAGTaGGCTCCCGGGCCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LNGASESIYFSLIPNPDIQKFLE*APGPFC
Trigger: GCAGAAGGGCCCGGGAGCCAACTCCAGAAACTTCTG...GATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp CTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCCCCAGGGCTCCTCTTaGTCGAACGTCACAGGTGCA +
Preference number: 5 (lower is better)
Translates to: LNGASESIYFSLIPNPDIPQGSS*SNVTGA
Trigger: TGCACCTGTGACGTTCGACAAAGAGGAGCCCTGGGG...GATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp AGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCCCCAGGGCTCCTCTTaGTCGAACGTCACAGGTGCA +
Preference number: 5 (lower is better)
Translates to: RAQKIRETIDDHCPLPEIPQGSS*SNVTGA
Trigger: TGCACCTGTGACGTTCGACAAAGAGGAGCCCTGGGG...AATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp GACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCTACGGCCGGCCATACTaGTTCCACTTGAAGCTCACC +
Preference number: 5 (lower is better)
Translates to: DLQEPRKYVRQSMTIAHCYGRPY*FHLKLT
Trigger: GGTGAGCTTCAAGTGGAACAAGTATGGCCGGCCGTA...GCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCACCTCCCCATTGGTGTaGGTGAGCCGCATCACCATG +
Preference number: 5 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFTSPLV*VSRITM
Trigger: CATGGTGATGCGGCTCACCAACACCAATGGGGAGGT...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp TGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGCAAACCTCCCCATTGGTGTaGGTGAGCCGCATCACCATG +
Preference number: 5 (lower is better)
Translates to: CLMSLVANLLFPEMGDLQTSPLV*VSRITM
Trigger: CATGGTGATGCGGCTCACCAACACCAATGGGGAGGT...TTGCAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGATTGCCCCAGACTGGTaGGGTCCTCTGTCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLIAPDW*GPLSGK
Trigger: TTTTCCAGACAGAGGACCCAACCAGTCTGGGGCAAT...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS TCA 90 bp AGAGGGCTGTTTCTCAGATGGATGCTCCTGGTCATCCTCCTTGTCTaGGTTCTTGAACACTTCCACATAGCGAAGCACTCGCAGAGGATT +
Preference number: 5 (lower is better)
Translates to: RGLFLRWMLLVILLV*VLEHFHIAKHSQRI
Trigger: AATCCTCTGCGAGTGCTTCGCTATGTGGAAGTGTTCAAGAACTCAGACAAGGAGGATGACCAGGAGCATCCATCTGAGAAACAGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS GCA 90 bp TGTATGACTTGTGTATGCAGCATGCAGCTTGTAGGTGTGTGTGTGTaGATGCAGTATGTGGGTTGTGGGGTGTGCGTGTATGCACAGTGT +
Preference number: 5 (lower is better)
Translates to: CMTCVCSMQLVGVCV*MQYVGCGVCVYAQC
Trigger: ACACTGTGCATACACGCACACCCCACAACCCACATACTGCATGCACACACACACACCTACAAGCTGCATGCTGCATACACAAGTCATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1
CDS-3UTR CAA 90 bp AATCCACAGCTCCCTGGACAAATGCTCTTGTGCTCATTAAACCCCATCTGTGGCGACAGGTCATTTTCCTaGGATGCTCGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: NPQLPGQMLLCSLNPICGDRSFS*DARSSG
Trigger: TCCACTGCTTCGAGCATCCAAGGAAAATGACCTGTC...GCCACAGATGGGGTTTAATGAGCACAAGAGCATTTGTCCAGGGAGCTGTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp CCCTGCCTCATGTCTTTAGTTGCCAACCTCCTTTTTCCTGAGATGGGTGACTTGGGTCTGTTCCAGAATTaGGCGAGCCTCTCGTTTATC +
Preference number: 5 (lower is better)
Translates to: PCLMSLVANLLFPEMGDLGLFQN*ASLSFI
Trigger: GATAAACGAGAGGCTCGCCAAATTCTGGAACAGACC...CAAGTCACCCATCTCAGGAAAAAGGAGGTTGGCAACTAAAGACATGAGGCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp CTTTTTCCTGAGATGGGTGACTTGCAAGAGCCCAGAAAATACGTGAGACAATCGGGGGTAGTCATAGAATaGCCCCAGACTGGTTGGGTC +
Preference number: 5 (lower is better)
Translates to: LFPEMGDLQEPRKYVRQSGVVIE*PQTGWV
Trigger: GACCCAACCAGTCTGGGGCAATTCTATGACTACCCC...CGATTGTCTCACGTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp GGCTGCGTGGGGCAGAAGAGAAATGGTCCTGACATTAATCTAGCATCCCTGCCTATGGTGAAGGCGAAGTaGACAATGCTGAACATGAAG +
Preference number: 5 (lower is better)
Translates to: GCVGQKRNGPDINLASLPMVKAK*TMLNMK
Trigger: CTTCATGTTCAGCATTGTCAACTTCGCCTTCACCAT...AGGCAGGGATGCTAGATTAATGTCAGGACCATTTCTCTTCTGCCCCACGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp AGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCATGCAGTATGTGGGTaGTGGGGTGTGCGTGTATGC +
Preference number: 5 (lower is better)
Translates to: RAQKIRETIDDHCPLPEIHAVCG*WGVRVC
Trigger: GCATACACGCACACCCCACAACCCACATACTGCATG...AATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp TTGCAAGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGGACAGGTCATTTTCCTaGGATGCTCGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: LQEPRKYVRQSMTIAHCQDRSFS*DARSSG
Trigger: TCCACTGCTTCGAGCATCCAAGGAAAATGACCTGTC...CTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp CTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCTACGGCCGGCCATACTaGTTCCACTTGAAGCTCACC +
Preference number: 5 (lower is better)
Translates to: LNGASESIYFSLIPNPDIYGRPY*FHLKLT
Trigger: GGTGAGCTTCAAGTGGAACAAGTATGGCCGGCCGTA...GATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS TCA 90 bp ACACTGGCAGATTATAGAAATGTGGCGAAAGAAACAGGTCTAGGATaGCAGCAACTGAGCAAGAGATGGGGTCTATTTGGGGCTGGGACT +
Preference number: 5 (lower is better)
Translates to: TLADYRNVAKETGLG*QQLSKRWGLFGAGT
Trigger: AGTCCCAGCCCCAAATAGACCCCATCTCTTGCTCAGTTGCTGTCATCCTAGACCTGTTTCTTTCGCCACATTTCTATAATCTGCCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1
CDS TCA 90 bp GTTTCTCAGATGGATGCTCCTGGTCATCCTCCTTGTCTGAGTTCTTaGACACTTCCACATAGCGAAGCACTCGCAGAGGATTCTGATCAT +
Preference number: 5 (lower is better)
Translates to: VSQMDAPGHPPCLSS*TLPHSEALAEDSDH
Trigger: ATGATCAGAATCCTCTGCGAGTGCTTCGCTATGTGGAAGTGTTCAAGAACTCAGACAAGGAGGATGACCAGGAGCATCCATCTGAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS GCA 90 bp ATTTGGGGCTGGGACTCTGAGTTTATCTCCTGTATGACTTGTGTATaGAGCATGCAGCTTGTAGGTGTGTGTGTGTGCATGCAGTATGTG +
Preference number: 5 (lower is better)
Translates to: IWGWDSEFISCMTCV*SMQLVGVCVCMQYV
Trigger: CACATACTGCATGCACACACACACACCTACAAGCTGCATGCTGCATACACAAGTCATACAGGAGATAAACTCAGAGTCCCAGCCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1
CDS CCA 90 bp TCTAGGATGACAGCAACTGAGCAAGAGATGGGGTCTATTTGGGGCTaGGACTCTGAGTTTATCTCCTGTATGACTTGTGTATGCAGCATG +
Preference number: 5 (lower is better)
Translates to: SRMTATEQEMGSIWG*DSEFISCMTCVCSM
Trigger: CATGCTGCATACACAAGTCATACAGGAGATAAACTCAGAGTCCCAGCCCCAAATAGACCCCATCTCTTGCTCAGTTGCTGTCATCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1
CDS-3UTR CAA 90 bp AGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTCTGCAGACAGGTCATTTTCCTaGGATGCTCGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: SLREYLLQPDTQSRHPSADRSFS*DARSSG
Trigger: TCCACTGCTTCGAGCATCCAAGGAAAATGACCTGTC...TGCAGAAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp AGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTCTGCAGGTCTGTTCCAGAATTaGGCGAGCCTCTCGTTTATC +
Preference number: 5 (lower is better)
Translates to: SLREYLLQPDTQSRHPSAGLFQN*ASLSFI
Trigger: GATAAACGAGAGGCTCGCCAAATTCTGGAACAGACC...TGCAGAAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp AGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTATTGCCCCAGACTGGTaGGGTCCTCTGTCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: RAQKIRETIDDHCPLPEIIAPDW*GPLSGK
Trigger: TTTTCCAGACAGAGGACCCAACCAGTCTGGGGCAAT...AATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCCCTGAGATGGGTGACTaGCAAGAGCCCAGAAAATAC +
Preference number: 5 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFPEMGD*QEPRKY
Trigger: GTATTTTCTGGGCTCTTGCAAGTCACCCATCTCAGG...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp ATTTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCAGAAGTTTCTGGAGTaGGCTCCCGGGCCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: ISIFTVYLESVLFLTLVFQKFLE*APGPFC
Trigger: GCAGAAGGGCCCGGGAGCCAACTCCAGAAACTTCTG...GAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp AGAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTGACAGGTCATTTTCCTaGGATGCTCGAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: RAQKIRETIDDHCPLPEIDRSFS*DARSSG
Trigger: TCCACTGCTTCGAGCATCCAAGGAAAATGACCTGTC...AATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp GAGCCCAGAAAATACGTGAGACAATCGATGACCATTGCCCATTGCCAGAAATTCATGGTGAAGGCGAAGTaGACAATGCTGAACATGAAG +
Preference number: 5 (lower is better)
Translates to: EPRKYVRQSMTIAHCQKFMVKAK*TMLNMK
Trigger: CTTCATGTTCAGCATTGTCAACTTCGCCTTCACCAT...GAATTTCTGGCAATGGGCAATGGTCATCGATTGTCTCACGTATTTTCTGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265310.6
ENST00000621710.2
CDS-3UTR CAA 90 bp CTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCAACCCTAGTTTTCCCTaGGCCACCACAACACAGAAT +
Preference number: 5 (lower is better)
Translates to: LNGASESIYFSLIPNPDINPSFP*ATTTQN
Trigger: ATTCTGTGTTGTGGTGGCCAAGGGAAAACTAGGGTT...GATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp AGACATCCTTCTGCAGAGTGTCTGACAGGCAGTCAGACAGCTGACACATTATTCAGTCTACCCTTTCTGTaGCACAAAAAGGAGGTTTAC +
Preference number: 5 (lower is better)
Translates to: RHPSAECLTGSQTADTLFSLPFL*HKKEVY
Trigger: GTAAACCTCCTTTTTGTGCAACAGAAAGGGTAGACT...GAATAATGTGTCAGCTGTCTGACTGCCTGTCAGACACTCTGCAGAAGGATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp AAAATTTCACAAAAGCACAGGCTTACTCATGCCAAGCACTCTTTCAAAGTTTGTCATGCAGTATGTGGGTaGTGGGGTGTGCGTGTATGC +
Preference number: 5 (lower is better)
Translates to: KISQKHRLTHAKHSFKVCHAVCG*WGVRVC
Trigger: GCATACACGCACACCCCACAACCCACATACTGCATG...ACAAACTTTGAAAGAGTGCTTGGCATGAGTAAGCCTGTGCTTTTGTGAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp AATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTGCAGGGCTGTCTGTGTaGCCCAAATACAACAAAAAT +
Preference number: 5 (lower is better)
Translates to: NGASESIYFSLIPNPDILAGLSV*PKYNKN
Trigger: ATTTTTGTTGTATTTGGGCAACACAGACAGCCCTGC...AAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp ACTAAATGGAGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATAACCCTAGTTTTCCCTaGGCCACCACAACACAGAAT +
Preference number: 5 (lower is better)
Translates to: TKWSLREYLLQPDTQSRHNPSFP*ATTTQN
Trigger: ATTCTGTGTTGTGGTGGCCAAGGGAAAACTAGGGTT...ATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCTCCATTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp AGCCTCAGAGAGTATTTACTTCAGCCTGATACCCAATCCAGACATCCTTCTGCAAGTCTACCCTTTCTGTaGCACAAAAAGGAGGTTTAC +
Preference number: 5 (lower is better)
Translates to: SLREYLLQPDTQSRHPSASLPFL*HKKEVY
Trigger: GTAAACCTCCTTTTTGTGCAACAGAAAGGGTAGACT...TGCAGAAGGATGTCTGGATTGGGTATCAGGCTGAAGTAAATACTCTCTGAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS-3UTR CAA 90 bp ATTTCTATATTTACTGTGTACCTCGAATCAGTCCTCTTCCTAACCCTAGTTTTCCAGCACCATCACCCCTaGATGCAATTCTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: ISIFTVYLESVLFLTLVFQHHHP*MQFSLI
Trigger: GATGAGAGAGAATTGCATCAAGGGGTGATGGTGCTG...GAAAACTAGGGTTAGGAAGAGGACTGATTCGAGGTACACAGTAAATATAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS GCA 72 bp GGGTGTTTTGACGAAGGATCTCCCAGCCTCGGTGACTaGTGCTCTGGGACGCGGTCCGGGACAGGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: GCFDEGSPSLGD*CSGTRSGTGRK
Trigger: CTTCCTCCCTGTCCCGGACCGCGTCCCAGAGCAGCAGTCACCGAGGCTGGGAGATCCTTCGTCAAAACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS CAA 90 bp CTCGGTGACTGCTGCTCTGGGACGCGGTCCGGGACAGGGAGGAAGTaGGAAGAGCCAAAGAGGCTCTGGCTAGAGTCCCACTCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: LGDCCSGTRSGTGRK*EEPKRLWLESHSQP
Trigger: GGGCTGAGAGTGGGACTCTAGCCAGAGCCTCTTTGGCTCTTCCAACTTCCTCCCTGTCCCGGACCGCGTCCCAGAGCAGCAGTCACCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS GCA 72 bp TGTTTTGACGAAGGATCTCCCAGCCTCGGTGACTGCTaGTCTGGGACGCGGTCCGGGACAGGGAGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: CFDEGSPSLGDC*SGTRSGTGRKL
Trigger: CAACTTCCTCCCTGTCCCGGACCGCGTCCCAGAGCAGCAGTCACCGAGGCTGGGAGATCCTTCGTCAAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS CAA 90 bp CCCCTCACTAAGGTTCAGTCCAAGATTCAAGTGCCCCAGGGTGTTTaGACGAAGGATCTCCCAGCCTCGGTGACTGCTGCTCTGGGACGC +
Preference number: 6 (lower is better)
Translates to: PLTKVQSKIQVPQGV*TKDLPASVTAALGR
Trigger: GCGTCCCAGAGCAGCAGTCACCGAGGCTGGGAGATCCTTCGTCAAAACACCCTGGGGCACTTGAATCTTGGACTGAACCTTAGTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS CAA 72 bp AAGGTTCAGTCCAAGATTCAAGTGCCCCAGGGTGTTTaGACGAAGGATCTCCCAGCCTCGGTGACTGCTGCT +
Preference number: 6 (lower is better)
Translates to: KVQSKIQVPQGV*TKDLPASVTAA
Trigger: AGCAGCAGTCACCGAGGCTGGGAGATCCTTCGTCAAAACACCCTGGGGCACTTGAATCTTGGACTGAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS TCA 72 bp AGTAGTTTTTGCTGGAGGATGGTGATGTCTCGAGAATaGGTGCGGTTGCCACCACGAAACTTAAGGGGGCGG +
Preference number: 6 (lower is better)
Translates to: SSFCWRMVMSRE*VRLPPRNLRGR
Trigger: CCGCCCCCTTAAGTTTCGTGGTGGCAACCGCACTCATTCTCGAGACATCACCATCCTCCAGCAAAAACTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1
ENST00000633909.1
CDS CAA 90 bp CTTCTGCTGCAGCATATGAAGCTTGTCCAGGTGCTGGTCCCAGTCTaGTTCTCTGACCAGAAAGGAGGGCAGAAGTTTCTGGAGTTGGCT +
Preference number: 6 (lower is better)
Translates to: LLLQHMKLVQVLVPV*FSDQKGGQKFLELA
Trigger: AGCCAACTCCAGAAACTTCTGCCCTCCTTTCTGGTCAGAGAACAAGACTGGGACCAGCACCTGGACAAGCTTCATATGCTGCAGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1
ENST00000633909.1
CDS TCA 72 bp CATAGGCCTCCTGTAGTAGTTTTTGCTGGAGGATGGTaGTGTCTCGAGAATGAGTGCGGTTGCCACCACGAA +
Preference number: 6 (lower is better)
Translates to: HRPPVVVFAGGW*CLENECGCHHE
Trigger: TTCGTGGTGGCAACCGCACTCATTCTCGAGACATCACCATCCTCCAGCAAAAACTACTACAGGAGGCCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS GCA 72 bp TGTGTATGCAGCATGCAGCTTGTAGGTGTGTGTGTGTaGATGCAGTATGTGGGTTGTGGGGTGTGCGTGTAT +
Preference number: 6 (lower is better)
Translates to: CVCSMQLVGVCV*MQYVGCGVCVY
Trigger: ATACACGCACACCCCACAACCCACATACTGCATGCACACACACACACCTACAAGCTGCATGCTGCATACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1
CDS CAA 72 bp CAGCATATGAAGCTTGTCCAGGTGCTGGTCCCAGTCTaGTTCTCTGACCAGAAAGGAGGGCAGAAGTTTCTG +
Preference number: 6 (lower is better)
Translates to: QHMKLVQVLVPV*FSDQKGGQKFL
Trigger: CAGAAACTTCTGCCCTCCTTTCTGGTCAGAGAACAAGACTGGGACCAGCACCTGGACAAGCTTCATATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1
ENST00000633909.1
CDS TCA 72 bp ATGGATGCTCCTGGTCATCCTCCTTGTCTGAGTTCTTaGACACTTCCACATAGCGAAGCACTCGCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: MDAPGHPPCLSS*TLPHSEALAED
Trigger: ATCCTCTGCGAGTGCTTCGCTATGTGGAAGTGTTCAAGAACTCAGACAAGGAGGATGACCAGGAGCATCCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS TCA 72 bp GGAGAATCACCTGTAGTAGTTTTTGCTGGAGGATGGTaGTGTCTCGAGAATGAGTGCGGTTGCCACCACGAA +
Preference number: 6 (lower is better)
Translates to: GESPVVVFAGGW*CLENECGCHHE
Trigger: TTCGTGGTGGCAACCGCACTCATTCTCGAGACATCACCATCCTCCAGCAAAAACTACTACAGGTGATTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442623.1
ENST00000633067.1
CDS CAA 90 bp GTGCAGTCCAGTAGAAGTTGCCTAAGAACAGACAGGTCATTTTCCTaGGATGCTCGAAGCAGTGGAGACTCTAGAATCCTCTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VQSSRSCLRTDRSFS*DARSSGDSRILFCC
Trigger: GCAGCAGAAGAGGATTCTAGAGTCTCCACTGCTTCGAGCATCCAAGGAAAATGACCTGTCTGTTCTTAGGCAACTTCTACTGGACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1
ENST00000633909.1
CDS TCA 72 bp TTTCTCAGATGGATGCTCCTGGTCATCCTCCTTGTCTaGGTTCTTGAACACTTCCACATAGCGAAGCACTCG +
Preference number: 6 (lower is better)
Translates to: FLRWMLLVILLV*VLEHFHIAKHS
Trigger: CGAGTGCTTCGCTATGTGGAAGTGTTCAAGAACTCAGACAAGGAGGATGACCAGGAGCATCCATCTGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000439304.5
ENST00000621710.2
ENST00000633909.1
CDS CCA 72 bp ACAGCAACTGAGCAAGAGATGGGGTCTATTTGGGGCTaGGACTCTGAGTTTATCTCCTGTATGACTTGTGTA +
Preference number: 6 (lower is better)
Translates to: TATEQEMGSIWG*DSEFISCMTCV
Trigger: TACACAAGTCATACAGGAGATAAACTCAGAGTCCCAGCCCCAAATAGACCCCATCTCTTGCTCAGTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265310.6
ENST00000442623.1
ENST00000621710.2
ENST00000633067.1