RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPV3 (Homo sapiens)

Ensembl gene IDs: ENSG00000167723

Ensembl transcript IDs: ENST00000301365.8, ENST00000381913.8, ENST00000571005.5, ENST00000571139.5, ENST00000572519.1, ENST00000573539.5, ENST00000574773.1, ENST00000575865.1, ENST00000576742.6, ENST00000577016.5, ENST00000616411.4

Found 1623 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGGCGTGCGCGTTGACGTCGGCGCCGGCGGCGATGAGCAGGGCTaGGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGCGCCGT +
Preference number: 1 (lower is better)
Translates to: LGVRVDVGAGGDEQG*DVPLPPLDGDVQRR
Trigger: ACGGCGCTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 90 bp GAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCT +
Preference number: 1 (lower is better)
Translates to: EPDSTIPQSLSAQSR*LRLQRQTAHAHTSS
Trigger: AGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR GCA 90 bp CCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCT +
Preference number: 1 (lower is better)
Translates to: PPSLKASLHRVGDSA*SARQRTRTPALGSA
Trigger: AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR GCA 90 bp AAGCCTTCGTGTTGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTaGGCGTTGACGTCGGCGCCGGCGGCGATGAGCAGGGCTGCGATG +
Preference number: 1 (lower is better)
Translates to: KPSCWYLGLKKAPLA*ALTSAPAAMSRAAM
Trigger: CATCGCAGCCCTGCTCATCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 90 bp GTCCTCGGCCACGGTCACCAGGGCGTGAAGGATGTTGTTGCCTCGTaGGTCCCGCGAGGTGATGTCCGTCTGCTCGTGCTCCATCAGCAG +
Preference number: 1 (lower is better)
Translates to: VLGHGHQGVKDVVAS*VPRGDVRLLVLHQQ
Trigger: CTGCTGATGGAGCACGAGCAGACGGACATCACCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTGGCCGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CCA 90 bp GTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTC +
Preference number: 1 (lower is better)
Translates to: VTPPAAPDSARAHQL*VPLLHRGFREFLDF
Trigger: GAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR CCA 90 bp CCGTCTGCTCGTGCTCCATCAGCAGCTGCACAATCTCGGGCTGGTTaGTGCATGCTGCCAGGGCCAGGGGCGTCTCACCGAAGTAGAAGC +
Preference number: 1 (lower is better)
Translates to: PSARAPSAAAQSRAG*CMLPGPGASHRSRS
Trigger: GCTTCTACTTCGGTGAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCACGAGCAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTaGCCAGAGCGAAAGGTCACAGGTCACCAGGCCTTGAGGAAGGAC +
Preference number: 1 (lower is better)
Translates to: KYGLQARMTAHLPGP*PERKVTGHQALRKD
Trigger: GTCCTTCCTCAAGGCCTGGTGACCTGTGACCTTTCGCTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR GCA 90 bp GAGATGCACATGGCCCAGATGAGCACAAACATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCGGGATG +
Preference number: 1 (lower is better)
Translates to: EMHMAQMSTNILPRS*SHPILCVRAKGCGM
Trigger: CATCCCGCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CCA 90 bp CAAATCTTCTCTTCTCCAGAGGCCCATGCCCAGCCCCGACCACTGTaGCTTAGAGCACGCGATTACTCCCTGGGTCAGCTGGGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: QIFSSPEAHAQPRPL*LRARDYSLGQLGGQ
Trigger: CTGCCCTCCCAGCTGACCCAGGGAGTAATCGCGTGCTCTAAGCCACAGTGGTCGGGGCTGGGCATGGGCCTCTGGAGAAGAGAAGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 90 bp TCACCAGGGCGTGAAGGATGTTGTTGCCTCGTGAGTCCCGCGAGGTaGTGTCCGTCTGCTCGTGCTCCATCAGCAGCTGCACAATCTCGG +
Preference number: 1 (lower is better)
Translates to: SPGREGCCCLVSPAR*CPSARAPSAAAQSR
Trigger: CCGAGATTGTGCAGCTGCTGATGGAGCACGAGCAGACGGACATCACCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 90 bp AGGAAGTCAGGCACATCCTCATCATGGCGCCGCCTGCAAAGCTCCTaGAGCTCCACCAGCAACTCTACCAACTCCTCCACGCAGCCCTCA +
Preference number: 1 (lower is better)
Translates to: RKSGTSSSWRRLQSS*SSTSNSTNSSTQPS
Trigger: TGAGGGCTGCGTGGAGGAGTTGGTAGAGTTGCTGGTGGAGCTGCAGGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCCTGACTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CCA 90 bp CCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATaGGATCACGGGTCTCCCACAAATTCAGGCAACCCAGTCACAGCA +
Preference number: 1 (lower is better)
Translates to: PPGYPAYLRPPHTLG*DHGSPTNSGNPVTA
Trigger: TGCTGTGACTGGGTTGCCTGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR CCA 90 bp CTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTaGGATGGGATCACGGGTCTCCCACAAATTCAGGCAACCCAGTCA +
Preference number: 1 (lower is better)
Translates to: LLPQDIQLTSVPRTL*DGITGLPQIQATQS
Trigger: TGACTGGGTTGCCTGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR CCA 90 bp AGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCACACAGAGTaGCCCAGGGCAGAGAAACTGGCCCAGAGTGCACTGCTAGGCCCC +
Preference number: 1 (lower is better)
Translates to: RGTKSLSVQLVWHTE*PRAEKLAQSALLGP
Trigger: GGGGCCTAGCAGTGCACTCTGGGCCAGTTTCTCTGCCCTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 90 bp GCTTCAGCGAAAGCCACGATCCCAGCACACAGGCACGCGCTACTGTaGGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCG +
Preference number: 1 (lower is better)
Translates to: ASAKATIPAHRHALL*GQDEEKSQDLSPRS
Trigger: CGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACAGTAGCGCGTGCCTGTGTGCTGGGATCGTGGCTTTCGCTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 90 bp AAGTCATTCTGCGTCTTGAAGTCCTCGGCCACGGTCACCAGGGCGTaGAGGATGTTGTTGCCTCGTGAGTCCCGCGAGGTGATGTCCGTC +
Preference number: 1 (lower is better)
Translates to: KSFCVLKSSATVTRA*RMLLPRESREVMSV
Trigger: GACGGACATCACCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTGGCCGAGGACTTCAAGACGCAGAATGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CCA 90 bp ATCGGCCCCATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTaGCACACAGAGTGGCCCAGGGCAGAGAAACTGGCCCAGAGTGCA +
Preference number: 1 (lower is better)
Translates to: IGPIRGTKSLSVQLV*HTEWPRAEKLAQSA
Trigger: TGCACTCTGGGCCAGTTTCTCTGCCCTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGATGGGGCCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR GCA 90 bp GTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTAGGAGCTGCAGTCCTTGTTGTCTTT +
Preference number: 1 (lower is better)
Translates to: VQVTQAYGELEEFQH*VAEAAVGAAVLVVF
Trigger: AAAGACAACAAGGACTGCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR TCA 90 bp GGAAGATGGCAATGCCCTCTTTCACAGAGATGCACATGGCCCAGATaGGCACAAACATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGT +
Preference number: 1 (lower is better)
Translates to: GRWQCPLSQRCTWPR*AQTSSLGAAATPSC
Trigger: ACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCATCTCTGTGAAAGAGGGCATTGCCATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 90 bp GTAGGATCATGTCGTACATGCGCTTCACAAAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCACCAGGGCGTGAAGGATGTTGTTGC +
Preference number: 1 (lower is better)
Translates to: VGSCRTCASQSHSAS*SPRPRSPGREGCCC
Trigger: GCAACAACATCCTTCACGCCCTGGTGACCGTGGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACATGATCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 90 bp ATGCCGGTTGTCGATGTTGGTGTTGTAGACAGTGATTTCCAGCACTaGGTTGTCCGTGGTGGTGTCCACGTTGGTGAGGTCGTAGAGGGA +
Preference number: 1 (lower is better)
Translates to: MPVVDVGVVDSDFQH*VVRGGVHVGEVVEG
Trigger: TCCCTCTACGACCTCACCAACGTGGACACCACCACGGACAACTCAGTGCTGGAAATCACTGTCTACAACACCAACATCGACAACCGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 90 bp AACATGTGCTTGGCAAACTTCTTCCACTTCATATGCAGCAGCGTGTaGAGCGGCTCCAGGGTCAGCATCTCATGCCGGTTGTCGATGTTG +
Preference number: 1 (lower is better)
Translates to: NMCLANFFHFICSSV*SGSRVSISCRLSML
Trigger: CAACATCGACAACCGGCATGAGATGCTGACCCTGGAGCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAAGTTTGCCAAGCACATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CCA 90 bp TGGGCTTGGAGAAGACAGGAGGAGAGGTCTTGGCAACTGTGGGGTTaGGTTCAAACCCTTCTATCTCCAGGAAGAAGTGTGCACCAAGGT +
Preference number: 1 (lower is better)
Translates to: WAWRRQEERSWQLWG*VQTLLSPGRSVHQG
Trigger: ACCTTGGTGCACACTTCTTCCTGGAGATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGTCTTCTCCAAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CCA 90 bp TGTCATCACAGTTACCAGAGATGCACTGCCGGATGTTGGAATCCATaGGCTTGGAGAAGACAGGAGGAGAGGTCTTGGCAACTGTGGGGT +
Preference number: 1 (lower is better)
Translates to: CHHSYQRCTAGCWNP*AWRRQEERSWQLWG
Trigger: ACCCCACAGTTGCCAAGACCTCTCCTCCTGTCTTCTCCAAGCCCATGGATTCCAACATCCGGCAGTGCATCTCTGGTAACTGTGATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 90 bp CTGTGGTCCAAGAATCAGGACACTCCAGCCTCCACAGCTCTGATATaGCCTTCCTGCATGACTTTGCCCAAGTACACATTCCTCTCGGAG +
Preference number: 1 (lower is better)
Translates to: LWSKNQDTPASTALI*PSCMTLPKYTFLSE
Trigger: CTCCGAGAGGAATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGAGGCTGGAGTGTCCTGATTCTTGGACCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR GCA 90 bp GGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTaGTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGG +
Preference number: 1 (lower is better)
Translates to: GNHPRPLCTALPSGI*SSAILVTFSQTPRW
Trigger: CCATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR TCA 90 bp AGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATaGATCCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCT +
Preference number: 1 (lower is better)
Translates to: SNSGIPSSIVWSLAS*IQTTSFQTKMSVQA
Trigger: AGCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGGATTCATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 90 bp AACAAATTCCATCCAGACCCACAGACAGCAGATCACCAAAACATGTaGGATGACAAACATCCCTATGGCTCTCCATTCCCCACTTGGACA +
Preference number: 1 (lower is better)
Translates to: NKFHPDPQTADHQNM*DDKHPYGSPFPTWT
Trigger: TGTCCAAGTGGGGAATGGAGAGCCATAGGGATGTTTGTCATCTCACATGTTTTGGTGATCTGCTGTCTGTGGGTCTGGATGGAATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 90 bp GAGTGCACTGCTAGGCCCCGACTCTTCAGTTTGCCTCAAGCCAGATaGACTTATCTATCGCCATGTTATCTGAAGGCCAAATTTCTATTT +
Preference number: 1 (lower is better)
Translates to: ECTARPRLFSLPQAR*TYLSPCYLKAKFLF
Trigger: AAATAGAAATTTGGCCTTCAGATAACATGGCGATAGATAAGTTCATCTGGCTTGAGGCAAACTGAAGAGTCGGGGCCTAGCAGTGCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 90 bp TCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTaGGAGTGGTTTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGT +
Preference number: 1 (lower is better)
Translates to: STPRFPGIPRLLQMH*EWFCCCSWKNLGFC
Trigger: ACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR CCA 90 bp CTCATTAAGTGCGCAACCAGCTTCTGCTTAAACATCTCCAACATCTaGAGCAGTTGCTGGATTCTGTTGAGCCAAAATCTTTCTCAATTT +
Preference number: 1 (lower is better)
Translates to: LIKCATSFCLNISNI*SSCWILLSQNLSQF
Trigger: AAATTGAGAAAGATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCAGAAGCTGGTTGCGCACTTAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 90 bp ATTTGTACAATCTCCAGGCTAAAAGGGACCTTAAACTTCTTCCAATaGCCATTTTCAACAACATTCCTCATTAAGTGCGCAACCAGCTTC +
Preference number: 1 (lower is better)
Translates to: ICTISRLKGTLNFFQ*PFSTTFLIKCATSF
Trigger: GAAGCTGGTTGCGCACTTAATGAGGAATGTTGTTGAAAATGGTCATTGGAAGAAGTTTAAGGTCCCTTTTAGCCTGGAGATTGTACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CAA 90 bp TCGTGTTGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTaGACGTCGGCGCCGGCGGCGATGAGCAGGGCTGCGATGTCCCCC +
Preference number: 2 (lower is better)
Translates to: SCWYLGLKKAPLACA*TSAPAAMSRAAMSP
Trigger: GGGGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACACGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp GAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCGGGATGGCCTCGTCGTAGAGGGAGGATaGCACGGGTCCGTACGCCCA +
Preference number: 2 (lower is better)
Translates to: ELQPPHLVRQGQGVRDGLVVEGG*HGSVRP
Trigger: TGGGCGTACGGACCCGTGTCATCCTCCCTCTACGAC...GAGGCCATCCCGCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp GTGCGCGTTGACGTCGGCGCCGGCGGCGATGAGCAGGGCTGCGATGTCCCCCTGCAGGAGGAGAGGTCTTaGCAACTGTGGGGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: VRVDVGAGGDEQGCDVPLQEERS*QLWGWV
Trigger: AACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTG...CAGGGGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCGACGTCAACGCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp AAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGCCAGCACTGCGTCGCTaGAGCTGCCGTAGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: KRARTFHPDRGGPAGLARPALRR*SCRRSC
Trigger: GCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGG...CCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR CCA 90 bp CACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCCCGCCTTGCCCATCTTaGCGGCCAGCTGCAGCGGCG +
Preference number: 2 (lower is better)
Translates to: HAHTSSGFRFYTEVSGNSPPCPS*RPAAAA
Trigger: CGCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGG...GGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CAA 90 bp CAGATGAGCACAAACATCCTCCCTAGGAGCTGCAGCCACCCCATCTaGTGCGTCAGGGCCAAGGGGTGCGGGATGGCCTCCTCCTCCCGG +
Preference number: 2 (lower is better)
Translates to: QMSTNILPRSCSHPI*CVRAKGCGMASSSR
Trigger: CCGGGAGGAGGAGGCCATCCCGCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGATGTTTGTGCTCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCAGTTCAGACACCCACTaGGCACTGAGCACGAGGGTG +
Preference number: 2 (lower is better)
Translates to: TESVTPPAAPDSARAHQLSSDTH*ALSTRV
Trigger: CACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACT...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp CTCCGGAGCCGCTTCTCCTTGATCTCACGACTGAGGATGTACTTCAGGATCTCCCCTTGGCGTGCGCGTTaGCGTCGGCGCCGGCGGCGA +
Preference number: 2 (lower is better)
Translates to: LRSRFSLISRLRMYFRISPWRAR*RRRRRR
Trigger: TCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGG...GGAGATCCTGAAGTACATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp GAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCGGGATGGCCTCGATGTTGTTGCCTCGTaGGTCCCGCGAGGTGATGTC +
Preference number: 2 (lower is better)
Translates to: ELQPPHLVRQGQGVRDGLDVVAS*VPRGDV
Trigger: GACATCACCTCGCGGGACTCACGAGGCAACAACATC...GAGGCCATCCCGCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 2 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp CAGGAGGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCAGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 2 (lower is better)
Translates to: QEERLLSLLLKTAAPFPPVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...TGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCGCTCCTCAAGACTGCTaGCCCTTTCCCGCCATCCAT +
Preference number: 2 (lower is better)
Translates to: TESVTPPAAPDSARAHQLAPQDC*PFPAIH
Trigger: ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGC...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp CGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: RTRTPALGSASTPRFPGISAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...AATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 2 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 2 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQEEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGGAGGCCGTCAGCTTGTaGATGAGGAAGTCAGGCACA +
Preference number: 2 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQEAVSL*MRKSGT
Trigger: TGTGCCTGACTTCCTCATGCACAAGCTGACGGCCTC...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp CGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCTGGTTGGTGCATGCTaGCAGGGCCAGGGGCGTCTC +
Preference number: 2 (lower is better)
Translates to: RTRTPALGSASTPRFPGILVGAC*QGQGRL
Trigger: GAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAG...AATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACGCTGACGGGGGAAGCTaGCAGGAGGAAAGACTCCTC +
Preference number: 2 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHADGGS*QEERLL
Trigger: GAGGAGTCTTTCCTCCTGCCAGCTTCCCCCGTCAGC...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CCA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACAACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 2 (lower is better)
Translates to: ACSARQRTRTPALGSASTTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CCA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACAGCCCCGACCACTGTaGCTTAGAGCACGCGATTAC +
Preference number: 2 (lower is better)
Translates to: ACSARQRTRTPALGSASTQPRPL*LRARDY
Trigger: GTAATCGCGTGCTCTAAGCCACAGTGGTCGGGGCTG...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR TCA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACAGCTTGAGACAGTTTaGACCTTGGGGTGTCAGGGG +
Preference number: 2 (lower is better)
Translates to: ACSARQRTRTPALGSASTQLETV*TLGCQG
Trigger: CCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTG...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR GCA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 2 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp ATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCCATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 2 (lower is better)
Translates to: ILPRSCSHPILCVRAKGCHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCGGCGATGAGCAGGGCTaGGATGTCCCCCTGCCGCCG +
Preference number: 2 (lower is better)
Translates to: KTKWNQASERMDCRSEGLGDEQG*DVPLPP
Trigger: CGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCCGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGA +
Preference number: 2 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPRAHQL*VPLLHR
Trigger: TCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCG...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CCA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTGCCCAGAGCAGCCCCGACCACTGTaGCTTAGAGCACGCGATTAC +
Preference number: 2 (lower is better)
Translates to: KYGLQARMTAHLPGPCPEQPRPL*LRARDY
Trigger: GTAATCGCGTGCTCTAAGCCACAGTGGTCGGGGCTG...CTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CCA 90 bp GAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCCCAAGGGGTGCGGGATaGCCTCCTCCTCCCGGGGGC +
Preference number: 2 (lower is better)
Translates to: EFCWMFRSPRPMVSLKSSPRGAG*PPPPGG
Trigger: GCCCCCGGGAGGAGGAGGCCATCCCGCACCCCTTGG...GGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp TCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: SSATLHSSPIRNLLLSHSSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...AGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR TCA 90 bp CAGGAGGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCAACACCCACTGAGCACTaGGCACGAGGGTGCACTCTG +
Preference number: 2 (lower is better)
Translates to: QEERLLSLLLKTAAPFPPTPTEH*ARGCTL
Trigger: CAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGT...TGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp TGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCACACCCACTGAGCACTaGGCACGAGGGTGCACTCTG +
Preference number: 2 (lower is better)
Translates to: CEVRTRKRARTFHPDRGGTPTEH*ARGCTL
Trigger: CAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGT...GCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp GGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCCAGCTTGAGACAGTTTaGACCTTGGGGTGTCAGGGG +
Preference number: 2 (lower is better)
Translates to: GKEPGPFTQIAAAQQDLPQLETV*TLGCQG
Trigger: CCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTG...GGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp CTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCGCTCCTCAAGACTGCTaGCCCTTTCCCGCCATCCAT +
Preference number: 2 (lower is better)
Translates to: LPQDIQLTSVPRTLWDGIAPQDC*PFPAIH
Trigger: ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGC...GATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCTGCTCCTCAAGACTaGTGCCCCTTTCCCGCCATC +
Preference number: 2 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSPAPQD*CPFPAI
Trigger: GATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGG...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACAAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: ACSARQRTRTPALGSASTSCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp ATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 2 (lower is better)
Translates to: ILPRSCSHPILCVRAKGCEEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp CTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCTCTGCAGGCGCCAGATaGGTTCGCTCTCCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: LPQDIQLTSVPRTLWDGISAGAR*VRSPWR
Trigger: TCTCCAAGGAGAGCGAACGCATCTGGCGCCTGCAGA...GATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR GCA 90 bp CATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGTCCTCGGCCACGGTCACCAGGCTGCGATGTCCCCCTaGCGCCGCTCGATGGCGATG +
Preference number: 2 (lower is better)
Translates to: HALHKVILRLEVLGHGHQAAMSP*RRSMAM
Trigger: CATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGC...CTGGTGACCGTGGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAAGCGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp TGCAGTCCTTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCAAGGCCCCCTTGGCGTaGGCGTTGACGTCGGCGCCG +
Preference number: 2 (lower is better)
Translates to: CSPCCLWDTSRSARPRLLKAPLA*ALTSAP
Trigger: CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTT...GAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCGTCCCCCGCACACTCTaGGATGGGATCACGGGTCTC +
Preference number: 2 (lower is better)
Translates to: KGSGRVFPERIPLLPQDIVPRTL*DGITGL
Trigger: GAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGAC...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CCA 90 bp CGGCCACGGTCACCAGGGCGTGAAGGATGTTGTTGCCTCGTGAGTCCCGCGAGGTGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 2 (lower is better)
Translates to: RPRSPGREGCCCLVSPARCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...CCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp CACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: HSRKSSSATLHSSPIRNLSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...CAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR TCA 90 bp AAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: KSSSATLHSSPIRNLLLSSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...GCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR TCA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCACACCCACTGAGCACTaGGCACGAGGGTGCACTCTG +
Preference number: 2 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFTPTEH*ARGCTL
Trigger: CAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGT...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTACACCCACTGAGCACTaGGCACGAGGGTGCACTCTG +
Preference number: 2 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPATPTEH*ARGCTL
Trigger: CAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGT...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTAGTTCAGACACCCACTaGGCACTGAGCACGAGGGTG +
Preference number: 2 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSSSDTH*ALSTRV
Trigger: CACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACT...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp GTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATCCAGCACTGCGTCGCTaGAGCTGCCGTAGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: VRLTGPGSSLRKETCVFHPALRR*SCRRSC
Trigger: GCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGG...ATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp CTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCCAGCACTGCGTCGCTaGAGCTGCCGTAGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: LTGPGSSLRKETCVFHSVPALRR*SCRRSC
Trigger: GCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGG...GACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGACCAGCTGCAGCGGCGTaGGGCCATCGTTGTTGCGAG +
Preference number: 2 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGPAAAA*GHRCCE
Trigger: CTCGCAACAACGATGGCCTCACGCCGCTGCAGCTGG...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp CACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 2 (lower is better)
Translates to: HAHTSSGFRFYTEVSGNSPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...GGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCCCTGCTCCTCAAGACTaGTGCCCCTTTCCCGCCATC +
Preference number: 2 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLPAPQD*CPFPAI
Trigger: GATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGG...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp CACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCCGCCTGCAAAGCTCCTaGAGCTCCACCAGCAACTCT +
Preference number: 2 (lower is better)
Translates to: HAHTSSGFRFYTEVSGNSRLQSS*SSTSNS
Trigger: AGAGTTGCTGGTGGAGCTGCAGGAGCTTTGCAGGCG...GGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGATCTCGGGCTGGTTGGTaGATGCTGCCAGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGSRAGW*MLPGPG
Trigger: CCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGA...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCCCGCACACTCTGGGATaGGATCACGGGTCTCCCACA +
Preference number: 2 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSPHTLG*DHGSPT
Trigger: TGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGG...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CCA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACAAGGTCTTGGCAACTGTaGGGTTGGGTTCAAACCCTT +
Preference number: 2 (lower is better)
Translates to: ACSARQRTRTPALGSASTRSWQL*GWVQTL
Trigger: AAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCT...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCAGTTCAGACACCCACTaGGCACTGAGCACGAGGGTG +
Preference number: 2 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFSSDTH*ALSTRV
Trigger: CACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACT...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp CATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGTCCTCGGCCACGGTCACCAGGTGAGTCCCGCGAGGTaGTGTCCGTCTGCTCGTGCT +
Preference number: 2 (lower is better)
Translates to: HALHKVILRLEVLGHGHQVSPAR*CPSARA
Trigger: AGCACGAGCAGACGGACATCACCTCGCGGGACTCAC...CTGGTGACCGTGGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAAGCGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTGCTCCTCAAGACTGCTaGCCCTTTCCCGCCATCCAT +
Preference number: 2 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISAPQDC*PFPAIH
Trigger: ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGC...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp GTGCATGAGGAAGTCAGGCACATCCTCATCATGGCGCCGCCTGCAAAGCTCCTGTCTGCAGGCGCCAGATaGGTTCGCTCTCCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: VHEEVRHILIMAPPAKLLSAGAR*VRSPWR
Trigger: TCTCCAAGGAGAGCGAACGCATCTGGCGCCTGCAGA...CAGGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCCTGACTTCCTCATGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACATTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: ACSARQRTRTPALGSASTLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp CGGCCACGGTCACCAGGGCGTGAAGGATGTTGTTGCCTCGTGAGTCCCGCGAGGTTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: RPRSPGREGCCCLVSPARLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...CCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCTCAGGATCTCCGCCTTaGCCATCTTGGCGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFSGSPP*PSWRPA
Trigger: AGCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGA...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp ACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTGTCCCCCGCACACTCTaGGATGGGATCACGGGTCTC +
Preference number: 2 (lower is better)
Translates to: TPALGSASTPRFPGIPRLVPRTL*DGITGL
Trigger: GAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGAC...AAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CCA 90 bp AGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTGCGTCGCTGAAGCAATCTCGGGCTGGTTaGTGCATGCTGCCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: RSPRPMVSLKSSSTASLKQSRAG*CMLPGP
Trigger: TGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTG...CTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp CAGCATCTCATGCCGGTTGTCGATGTTGGTGTTGTAGACAGTGATTTCCAGCACCCGCCTTGCCCATCTTaGCGGCCAGCTGCAGCGGCG +
Preference number: 2 (lower is better)
Translates to: QHLMPVVDVGVVDSDFQHPPCPS*RPAAAA
Trigger: CGCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGG...GTGCTGGAAATCACTGTCTACAACACCAACATCGACAACCGGCATGAGATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CAA 90 bp AGCGGCGTGAGGCCATCGTTGTTGCGAGTGGTCTCCAGCTCCCAGTaGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTTCACAAAG +
Preference number: 2 (lower is better)
Translates to: SGVRPSLLRVVSSSQ*PLRSRIMSYMRFTK
Trigger: CTTTGTGAAGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGACCACTCGCAACAACGATGGCCTCACGCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCACACCCACTGAGCACTaGGCACGAGGGTGCACTCTG +
Preference number: 2 (lower is better)
Translates to: SISPSQADLQLVKPEASPTPTEH*ARGCTL
Trigger: CAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGT...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp GCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGCCCACTCAGACAAATTaGCAACTGCCCCTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: ASRAGLHHPSKPLCTESVPTQTN*QLPLSS
Trigger: TGAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGG...CACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp TTCTGGTGGTTTCGGCCCCAGTCACCTGGAAAATCCTTCCGTCTCCACTTCACCCCTGCTCCTCAAGACTaGTGCCCCTTTCCCGCCATC +
Preference number: 2 (lower is better)
Translates to: FWWFRPQSPGKSFRLHFTPAPQD*CPFPAI
Trigger: GATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGG...GGTGAAGTGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGAAACCACCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 2 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSEEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR GCA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAATTCTCCAGAGGCCCATaGCCAGCCCCGACCACTGTG +
Preference number: 2 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKFSRGP*PAPTTV
Trigger: CACAGTGGTCGGGGCTGGGCATGGGCCTCTGGAGAA...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp AAGCCTTCGTGTTGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGGCCCTCAGACACGGCTaGAAAGATGCGCTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: KPSCWYLGLKKAPLACALALRHG*KDALLQ
Trigger: CTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGC...CAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 2 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp GCAGATCCGAGGGTCTCAGCAGGAAGATGGCAATGCCCTCTTTCACAGAGATGCTCCTCTGCTCTTCCTTaGCCAGCTGTGCACTGGGGC +
Preference number: 2 (lower is better)
Translates to: ADPRVSAGRWQCPLSQRCSSALP*PAVHWG
Trigger: GCCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGA...GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGCTGAGACCCTCGGATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp CAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCTCCTCTGCTCTTCCTTaGCCAGCTGTGCACTGGGGC +
Preference number: 2 (lower is better)
Translates to: QLWVPLLHRGFREFLDFFSSALP*PAVHWG
Trigger: GCCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGA...GAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCAGCTTGAGACAGTTTaGACCTTGGGGTGTCAGGGG +
Preference number: 2 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPQLETV*TLGCQG
Trigger: CCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTG...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGAAACATCTCTCAGCTTaGGACAGTTTGAACCTTGGG +
Preference number: 2 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMKHLSA*DSLNLG
Trigger: CCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTT...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTGCCCAGAGTATGACCTTCCTGCATaGCTTTGCCCAAGTACACAT +
Preference number: 2 (lower is better)
Translates to: KYGLQARMTAHLPGPCPEYDLPA*LCPSTH
Trigger: ATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATA...CTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp GTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATGTTGGTACTTGGGGTTaGAGAAGGCCCCCTTGGCGT +
Preference number: 2 (lower is better)
Translates to: VRLTGPGSSLRKETCVFHVGTWG*RRPPWR
Trigger: ACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAAC...ATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp CTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 2 (lower is better)
Translates to: LHRGFREFLDFFKCIESGVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...ACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp GTGCATGAGGAAGTCAGGCACATCCTCATCATGGCGCCGCCTGCAAAGCTCCTGAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: VHEEVRHILIMAPPAKLLSCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...CAGGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCCTGACTTCCTCATGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGACATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 2 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR GCA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGACATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 2 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR GCA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTGCCCAGAGAACATCTGGAGCAGTTaGTGGATTCTGTTGAGCCAA +
Preference number: 2 (lower is better)
Translates to: KYGLQARMTAHLPGPCPENIWSS*WILLSQ
Trigger: TTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTT...CTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp TGGTCTCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTACACGGCTGCAAAGATaGGCTTCTTCAGCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: WSPAPSCHSAVGSCRTCATRLQR*ASSAAS
Trigger: AGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGT...AGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp AAGAGAATGGGATACTTGGAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGCTGGTTGGTGCATGCTaGCAGGGCCAGGGGCGTCTC +
Preference number: 2 (lower is better)
Translates to: KRMGYLEFCWMFRSPRPMLVGAC*QGQGRL
Trigger: GAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAG...CATAGGCCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCGAGGTGATGTCCGTCTaGTCGTGCTCCATCAGCAGC +
Preference number: 2 (lower is better)
Translates to: KTKWNQASERMDCRSEGLEVMSV*SCSISS
Trigger: GCTGCTGATGGAGCACGAGCAGACGGACATCACCTC...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCAATGTTCAGCGCCGTCTaGCCTGAGCCCAGGGAGGTC +
Preference number: 2 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSMFSAV*PEPREV
Trigger: GACCTCCCTGGGCTCAGGGCAGACGGCGCTGAACAT...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573539.5
3UTR-3UTR CCA 90 bp TGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCTCACAGCAGAAGAGATaGTACAATGTGTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: CEVRTRKRARTFHPDRGGSQQKR*YNVWAG
Trigger: CCCAGCCCACACATTGTACCATCTCTTCTGCTGTGA...GCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CCA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCCGTTCACTCCAAGGATaGTCTCCTTTTCCCCGAAGG +
Preference number: 2 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLRSLQG*SPFPRR
Trigger: CCTTCGGGGAAAAGGAGACCATCCTTGGAGTGAACG...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CCA 90 bp GCAGATCCGAGGGTCTCAGCAGGAAGATGGCAATGCCCTCTTTCACAGAGATGCACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 2 (lower is better)
Translates to: ADPRVSAGRWQCPLSQRCTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGCTGAGACCCTCGGATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAACGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGA +
Preference number: 2 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKRAHQL*VPLLHR
Trigger: TCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCG...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR CCA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTGCCCAGAGAACATCTCCAACATCTaGAGCAGTTGCTGGATTCTG +
Preference number: 2 (lower is better)
Translates to: KYGLQARMTAHLPGPCPENISNI*SSCWIL
Trigger: CAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTT...CTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CCA 90 bp CAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCTGGCCAGCTGTGCACTaGGGCTGTTGGGATTGGATG +
Preference number: 2 (lower is better)
Translates to: QLWVPLLHRGFREFLDFFWPAVH*GCWDWM
Trigger: CATCCAATCCCAACAGCCCCAGTGCACAGCTGGCCA...GAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp ACAGTGATTTCCAGCACTGAGTTGTCCGTGGTGGTGTCCACGTTGGTGAGGTCGTGGCCAGCTGTGCACTaGGGCTGTTGGGATTGGATG +
Preference number: 2 (lower is better)
Translates to: TVISSTELSVVVSTLVRSWPAVH*GCWDWM
Trigger: CATCCAATCCCAACAGCCCCAGTGCACAGCTGGCCA...CGACCTCACCAACGTGGACACCACCACGGACAACTCAGTGCTGGAAATCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp TGCAGTCCTTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCGGCACATCCTCATCATaGCGCCGCCTGCAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: CSPCCLWDTSRSARPRLLGTSSS*RRLQSS
Trigger: GGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCC...GAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp GGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATCCTGCCGCCGCTCGATaGCGATGTTCAGCGCCGTCT +
Preference number: 2 (lower is better)
Translates to: GSASTPRFPGIPRLLQMHPAAAR*RCSAPS
Trigger: AGACGGCGCTGAACATCGCCATCGAGCGGCGGCAGG...ATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CAA 90 bp AAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTaGCCCGGAGTGTCTCATGCAGACTTTTGTGTGTGTGAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: KEPGPFTQIAAAQQD*PGVSHADFCVCEEK
Trigger: CTTTTCTTCACACACACAAAAGTCTGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCA +
Preference number: 2 (lower is better)
Translates to: KTKWNQASERMDCRSEGLSHSAS*SPRPRS
Trigger: TGACCGTGGCCGAGGACTTCAAGACGCAGAATGACT...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: HPRPLCTALPSGICSSAISCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp CGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTTTACCAGAGATGCACTaGCGGATGTTGGAATCCATG +
Preference number: 2 (lower is better)
Translates to: RTRTPALGSASTPRFPGILPEMH*RMLESM
Trigger: CATGGATTCCAACATCCGGCAGTGCATCTCTGGTAA...AATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp GCAGATCCGAGGGTCTCAGCAGGAAGATGGCAATGCCCTCTTTCACAGAGATGCGCCCTCAGACACGGCTaGAAAGATGCGCTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: ADPRVSAGRWQCPLSQRCALRHG*KDALLQ
Trigger: CTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGC...GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGCTGAGACCCTCGGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp CATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGTCCTCGGCCACGGTCACCAGATGTCCGTCTGCTCGTaGTCCATCAGCAGCTGCACA +
Preference number: 2 (lower is better)
Translates to: HALHKVILRLEVLGHGHQMSVCS*SISSCT
Trigger: TGTGCAGCTGCTGATGGAGCACGAGCAGACGGACAT...CTGGTGACCGTGGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAAGCGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp TCCCTATGGCTCTCCATTCCCCACTTGGACAAAAGCTGGCAGGTTAGGCAAATAGTCCCCCGCACACTCTaGGATGGGATCACGGGTCTC +
Preference number: 2 (lower is better)
Translates to: SLWLSIPHLDKSWQVRQIVPRTL*DGITGL
Trigger: GAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGAC...TATTTGCCTAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAGCCATAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCAGACAGTTTGAACCTTaGGGTGTCAGGGGACGTTCA +
Preference number: 2 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSRQFEP*GVRGRS
Trigger: TGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCT...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CCA 90 bp CGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTAGTCCTTGTTGTCTTTaGGACACTTCTCGATCAGCG +
Preference number: 2 (lower is better)
Translates to: RTRTPALGSASTPRFPGISPCCL*DTSRSA
Trigger: CGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACT...AATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp TTCATCAGGCAGGTCTTCCCCGTGTCGGAGGCCGTCAGCTTGTGCATGAGGAAGTACTTGGAGTTCTGCTaGATGTTCAGGTCACCCAGG +
Preference number: 2 (lower is better)
Translates to: FIRQVFPVSEAVSLCMRKYLEFC*MFRSPR
Trigger: CCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTA...CTTCCTCATGCACAAGCTGACGGCCTCCGACACGGGGAAGACCTGCCTGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp ACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTGTAATCCCAGCCCTCTaGGAGGTCAAAGTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: TPALGSASTPRFPGIPRLVIPAL*EVKVGR
Trigger: TCTGCCCACTTTGACCTCCCAGAGGGCTGGGATTAC...AAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp ACAGTGATTTCCAGCACTGAGTTGTCCGTGGTGGTGTCCACGTTGGTGAGGTCGGTCCAGATTCAAAGCTaGGCTAGGCCAGGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: TVISSTELSVVVSTLVRSVQIQS*ARPGVV
Trigger: CACCACACCTGGCCTAGCCCAGCTTTGAATCTGGAC...CGACCTCACCAACGTGGACACCACCACGGACAACTCAGTGCTGGAAATCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCGTCCAGATTCAAAGCTaGGCTAGGCCAGGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: KTKWNQASERMDCRSEGLVQIQS*ARPGVV
Trigger: CACCACACCTGGCCTAGCCCAGCTTTGAATCTGGAC...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp ACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCATCGTTGTTGCGAGTaGTCTCCAGCTCCCAGTTGC +
Preference number: 2 (lower is better)
Translates to: TPALGSASTPRFPGIPRLHRCCE*SPAPSC
Trigger: GCAACTGGGAGCTGGAGACCACTCGCAACAACGATG...AAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp TCAATAATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCATCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: SIIKGSLRLEPSKSLKTSSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...TGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTATTATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCAGTTCAGACACCCACTaGGCACTGAGCACGAGGGTG +
Preference number: 2 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLSSDTH*ALSTRV
Trigger: CACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACT...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCCACTCAGACAAATTaGCAACTGCCCCTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPPTQTN*QLPLSS
Trigger: TGAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGG...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp ACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTTTGCTCTGGGCACCCTaGGGCCAAATATATAATACT +
Preference number: 2 (lower is better)
Translates to: TRKRARTFHPDRGGPAGLLLWAP*GQIYNT
Trigger: AGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAA...AAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTAGACAAATTGACAACTaGCCCTCAGTTCAGACACCC +
Preference number: 2 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPARQIDN*PSVQTP
Trigger: GGGTGTCTGAACTGAGGGGCAGTTGTCAATTTGTCT...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp GGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCGGATACTTGGAGTTCTaGTGGATGTTCAGGTCACCC +
Preference number: 2 (lower is better)
Translates to: GPGSSLRKETCVFHSVHFGYLEF*WMFRSP
Trigger: GGGTGACCTGAACATCCAGCAGAACTCCAAGTATCC...GAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp TGCAGTCCTTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCACACGGCTGCAAAGATaGGCTTCTTCAGCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: CSPCCLWDTSRSARPRLLTRLQR*ASSAAS
Trigger: AGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGT...GAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp TGCAGTCCTTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCTGCTCCATCAGCAGCTaGACAATCTCGGGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: CSPCCLWDTSRSARPRLLCSISS*TISGWL
Trigger: CAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCA...GAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTTCACAGCAGAAGAGATaGTACAATGTGTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPSQQKR*YNVWAG
Trigger: CCCAGCCCACACATTGTACCATCTCTTCTGCTGTGA...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CCA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGACGTTCACTCCAAGGATaGTCTCCTTTTCCCCGAAGG +
Preference number: 2 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRRSLQG*SPFPRR
Trigger: CCTTCGGGGAAAAGGAGACCATCCTTGGAGTGAACG...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CCA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTAGACAGTTTGAACCTTaGGGTGTCAGGGGACGTTCA +
Preference number: 2 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPRQFEP*GVRGRS
Trigger: TGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCT...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CCA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGATGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 2 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CCA 90 bp ACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTTGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 2 (lower is better)
Translates to: TPALGSASTPRFPGIPRLCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...AAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CCA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCTCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: KTKWNQASERMDCRSEGLSQTPR*SWLSAG
Trigger: GCCTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCGGATGTTGGAATCCATaGGCTTGGAGAAGACAGGAG +
Preference number: 2 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFGCWNP*AWRRQE
Trigger: CTCCTGTCTTCTCCAAGCCCATGGATTCCAACATCC...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp TCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTTCACATGCACTGCCGGATGTTaGAATCCATGGGCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: SSSQLPLRSRIMSYMRFTCTAGC*NPWAWR
Trigger: TCTCCAAGCCCATGGATTCCAACATCCGGCAGTGCA...TGTGAAGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp CATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGTCCTCGGCCACGGTCACCAGTGCACTGCCGGATGTTaGAATCCATGGGCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: HALHKVILRLEVLGHGHQCTAGC*NPWAWR
Trigger: TCTCCAAGCCCATGGATTCCAACATCCGGCAGTGCA...CTGGTGACCGTGGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAAGCGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CAA 90 bp ACCTCATTGATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGGT +
Preference number: 2 (lower is better)
Translates to: TSLIRKHSRKSSSAT*HSSPIRNLLLSHSG
Trigger: ACCAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGATCAATGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR CAA 90 bp ATGGGCTTGGAGAAGACAGGAGGAGAGGTCTTGGCAACTGTGGGGTaGGGTTCAAACCCTTCTATCTCCAGGAAGAAGTGTGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: MGLEKTGGEVLATVG*GSNPSISRKKCAPR
Trigger: CCTTGGTGCACACTTCTTCCTGGAGATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGTCTTCTCCAAGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGACCCACTCAGACAAATTaGCAACTGCCCCTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRPTQTN*QLPLSS
Trigger: TGAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGG...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp TTCTGGTGGTTTCGGCCCCAGTCACCTGGAAAATCCTTCCGTCTCCACTTCACCTCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 2 (lower is better)
Translates to: FWWFRPQSPGKSFRLHFTSTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...GGTGAAGTGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGAAACCACCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR TCA 90 bp GGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATGTTGGTACTTGGGGTTaGAGAAGGCCCCCTTGGCGT +
Preference number: 2 (lower is better)
Translates to: GSASTPRFPGIPRLLQMHVGTWG*RRPPWR
Trigger: ACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAAC...ATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp TTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCACCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 2 (lower is better)
Translates to: LLSLGHFSISEAKATPNPPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...TGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp AGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTGCGTCGCTGAAGAGACAAATTGACAACTaGCCCTCAGTTCAGACACCC +
Preference number: 2 (lower is better)
Translates to: RSPRPMVSLKSSSTASLKRQIDN*PSVQTP
Trigger: GGGTGTCTGAACTGAGGGGCAGTTGTCAATTTGTCT...CTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR GCA 90 bp AGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAGGTTTACACCAGCTGTTTAGACAAATTGACAACTaGCCCTCAGTTCAGACACCC +
Preference number: 2 (lower is better)
Translates to: RRLPGSRLLLAVGLHQLFRQIDN*PSVQTP
Trigger: GGGTGTCTGAACTGAGGGGCAGTTGTCAATTTGTCT...AAACAGCTGGTGTAAACCTACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACAGAGGTGATGTCCGTCTaGTCGTGCTCCATCAGCAGC +
Preference number: 2 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTEVMSV*SCSISS
Trigger: GCTGCTGATGGAGCACGAGCAGACGGACATCACCTC...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp ATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCTTCTTCCACTTCATATaGAGCAGCGTGTGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: IRKHSRKSSSATLHSSPIFFHFI*SSVCSG
Trigger: GCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAA...GATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp CTTCTTGACTTATGGCTTCCCTTGGTAAACCTACCTAGGCTCAGACGTTTTGGCGCTGACGGGGGAAGCTaGCAGGAGGAAAGACTCCTC +
Preference number: 2 (lower is better)
Translates to: LLDLWLPLVNLPRLRRFGADGGS*QEERLL
Trigger: GAGGAGTCTTTCCTCCTGCCAGCTTCCCCCGTCAGC...GCCAAAACGTCTGAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTCAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CCA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCAAGATGGTACAATGTGTaGGCTGGGGTTGGGGCTGAC +
Preference number: 2 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSRWYNV*AGVGAD
Trigger: GTCAGCCCCAACCCCAGCCCACACATTGTACCATCT...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CCA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACAACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 2 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CCA 90 bp TGCAGTCCTTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCTCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: CSPCCLWDTSRSARPRLLSQTPR*SWLSAG
Trigger: GCCTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...GAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR CAA 90 bp TCAACCCTCCCATTTGACAGATGGGGAAAGTCAGGACCCTTAGACTaGATCTGCCCAAGGTTACATGGTCTGAGACAGGAGCGGACACCA +
Preference number: 2 (lower is better)
Translates to: STLPFDRWGKSGPLD*ICPRLHGLRQERTP
Trigger: TGGTGTCCGCTCCTGTCTCAGACCATGTAACCTTGGGCAGATCAAGTCTAAGGGTCCTGACTTTCCCCATCTGTCAAATGGGAGGGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
3UTR-3UTR TCA 90 bp GTACTCGGCGTTGATGAACCTGCCCAGGATGTCGTTCTCTTCAGCAAAGGCAAGTCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 2 (lower is better)
Translates to: VLGVDEPAQDVVLFSKGKSTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...CTTGCCTTTGCTGAAGAGAACGACATCCTGGGCAGGTTCATCAACGCCGAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAACCCACTGAGACATACTaGGGTATGCGACTAACTGCT +
Preference number: 2 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKPTETY*GMRLTA
Trigger: AGCAGTTAGTCGCATACCTCAGTATGTCTCAGTGGG...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp GCAGATCCGAGGGTCTCAGCAGGAAGATGGCAATGCCCTCTTTCACAGAGATGCCCTTGGTGTTGGGGTTaGTGTTTAACAAGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: ADPRVSAGRWQCPLSQRCPWCWG*CLTRPS
Trigger: TGAAGGCCTTGTTAAACATCAACCCCAACACCAAGG...GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGCTGAGACCCTCGGATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp GAGTCAAAGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATGGCTCCTCAAGACTGCTaGCCCTTTCCCGCCATCCAT +
Preference number: 2 (lower is better)
Translates to: ESKQFWNSQLHSVELGIMAPQDC*PFPAIH
Trigger: ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGC...CATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCTTTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACAAAGACTCCTCTCCCTaGTCCTCAAGACTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYKDSSP*SSRLLP
Trigger: GGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTT...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTGCCCAGAGATGTCTTTTCCGTATTaGAAGTTAAAACCCTGTGTT +
Preference number: 2 (lower is better)
Translates to: KYGLQARMTAHLPGPCPEMSFPY*KLKPCV
Trigger: AACACAGGGTTTTAACTTGCAATACGGAAAAGACAT...CTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp GTAAATGAGAATTTACAAGGATCCGGCACATTCAAGGGAGAATGGGGTGACGATCGGCCCAGCAGGACTTaGCCGGAGTGTCTCATGCAG +
Preference number: 2 (lower is better)
Translates to: VNENLQGSGTFKGEWGDDRPSRT*PECLMQ
Trigger: CTGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCG...ATCGTCACCCCATTCTCCCTTGAATGTGCCGGATCCTTGTAAATTCTCATTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp TGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGCGCCTGCAAAGCTCCTaGAGCTCCACCAGCAACTCT +
Preference number: 2 (lower is better)
Translates to: WILLKSAVRLTGPGSSLRRLQSS*SSTSNS
Trigger: AGAGTTGCTGGTGGAGCTGCAGGAGCTTTGCAGGCG...CCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp AAGAGAATGGGATACTTGGAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGTCTCCAGCTCCCAGTTaGCACTCCGCAGTAGGATCA +
Preference number: 2 (lower is better)
Translates to: KRMGYLEFCWMFRSPRPMSPAPS*HSAVGS
Trigger: TGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGA...CATAGGCCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGCTGACGGGGGAAGCTaGCAGGAGGAAAGACTCCTC +
Preference number: 2 (lower is better)
Translates to: LLHRGFREFLDFFKCIESADGGS*QEERLL
Trigger: GAGGAGTCTTTCCTCCTGCCAGCTTCCCCCGTCAGC...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CCA 90 bp ACAGTGATTTCCAGCACTGAGTTGTCCGTGGTGGTGTCCACGTTGGTGAGGTCGAGTCCTTGTTGTCTTTaGGACACTTCTCGATCAGCG +
Preference number: 2 (lower is better)
Translates to: TVISSTELSVVVSTLVRSSPCCL*DTSRSA
Trigger: CGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACT...CGACCTCACCAACGTGGACACCACCACGGACAACTCAGTGCTGGAAATCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCAAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 2 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTCGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGA +
Preference number: 2 (lower is better)
Translates to: LLHRGFREFLDFFKCIESRAHQL*VPLLHR
Trigger: TCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCG...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CCA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAAATAACGGCGGCAGAGTaGATTTTCTGGTGGTTTCGG +
Preference number: 2 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKITAAE*IFWWFR
Trigger: CCGAAACCACCAGAAAATCCACTCTGCCGCCGTTAT...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CCA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACAGTAATCCCAGCCCTCTaGGAGGTCAAAGTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTVIPAL*EVKVGR
Trigger: TCTGCCCACTTTGACCTCCCAGAGGGCTGGGATTAC...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp AAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCTTGCTCTGGGCACCCTaGGGCCAAATATATAATACT +
Preference number: 2 (lower is better)
Translates to: KSSSATLHSSPIRNLLLSLLWAP*GQIYNT
Trigger: AGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAA...GCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR TCA 90 bp AAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCTTGCCTCAAGCCAGATaGACTTATCTATCGCCATGT +
Preference number: 2 (lower is better)
Translates to: KSSSATLHSSPIRNLLLSLPQAR*TYLSPC
Trigger: ACATGGCGATAGATAAGTTCATCTGGCTTGAGGCAA...GCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR TCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGATTGCCTCAAGCCAGATaGACTTATCTATCGCCATGT +
Preference number: 2 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGLPQAR*TYLSPC
Trigger: ACATGGCGATAGATAAGTTCATCTGGCTTGAGGCAA...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp GTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACACAGTCGGAAATCAACGGTCACCAGGGCGTaGAGGATGTTGTTGCCTCGT +
Preference number: 2 (lower is better)
Translates to: VFHSVHFTSLIRKHSRKSTVTRA*RMLLPR
Trigger: ACGAGGCAACAACATCCTTCACGCCCTGGTGACCGT...TGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp TTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCAGCTGCAGCGGCGTaGGGCCATCGTTGTTGCGAG +
Preference number: 2 (lower is better)
Translates to: LFLEESWILLKSAVRLTGPAAAA*GHRCCE
Trigger: CTCGCAACAACGATGGCCTCACGCCGCTGCAGCTGG...GCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTAGACGAGGGTCAGGGTaGTGTTGTAGAAGAAATAAA +
Preference number: 2 (lower is better)
Translates to: HPRPLCTALPSGICSSAIRRGSG*CCRRNK
Trigger: TTTATTTCTTCTACAACATCACCCTGACCCTCGTCT...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp AGCCTCCACAGCTCTGATATGACCTTCCTGCATGACTTTGCCCAAGTACACATTAAAGACTCCTCTCCCTaGTCCTCAAGACTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: SLHSSDMTFLHDFAQVHIKDSSP*SSRLLP
Trigger: GGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTT...AATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp CTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTAAAGACTCCTCTCCCTaGTCCTCAAGACTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LHRGFREFLDFFKCIESGKDSSP*SSRLLP
Trigger: GGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTT...ACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR GCA 90 bp GTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACACAGTCGGAAATCACATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 2 (lower is better)
Translates to: VFHSVHFTSLIRKHSRKSHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...TGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGATATCGATCGAGCAGCTaGTATTTCTGCTTCAGCGAA +
Preference number: 2 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGYRSSS*YFCFSE
Trigger: TTCGCTGAAGCAGAAATAGCAGCTGCTCGATCGATA...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR GCA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTGATTTTGTTGAAATCTaGTGTTCGTCTTACAGGCCC +
Preference number: 2 (lower is better)
Translates to: HPRPLCTALPSGICSSAIDFVEI*CSSYRP
Trigger: GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATC...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTGCTGCGATGTCCCCCTaGCGCCGCTCGATGGCGATG +
Preference number: 2 (lower is better)
Translates to: FAVVPGRILDFVEICCSSAAMSP*RRSMAM
Trigger: CATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGC...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTTCCGAGAGGATGGACTaGAGATCCGAGGGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: LLHRGFREFLDFFKCIESSERMD*RSEGLS
Trigger: GCTGAGACCCTCGGATCTGCAGTCCATCCTCTCGGA...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp GTAAATGAGAATTTACAAGGATCCGGCACATTCAAGGGAGAATGGGGTGACGATGCTGACGGGGGAAGCTaGCAGGAGGAAAGACTCCTC +
Preference number: 2 (lower is better)
Translates to: VNENLQGSGTFKGEWGDDADGGS*QEERLL
Trigger: GAGGAGTCTTTCCTCCTGCCAGCTTCCCCCGTCAGC...ATCGTCACCCCATTCTCCCTTGAATGTGCCGGATCCTTGTAAATTCTCATTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CCA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACATGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 2 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CCA 90 bp GGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATGAGTGGATTTTCTGGTaGTTTCGGCCCCAGTCACCT +
Preference number: 2 (lower is better)
Translates to: GSASTPRFPGIPRLLQMHEWIFW*FRPQSP
Trigger: AGGTGACTGGGGCCGAAACCACCAGAAAATCCACTC...ATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR CCA 90 bp TCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTTGGCAACTGTGGGGTTaGGTTCAAACCCTTCTATCT +
Preference number: 2 (lower is better)
Translates to: SYRPRVFVKEGDVRLPFSWQLWG*VQTLLS
Trigger: AGATAGAAGGGTTTGAACCCAACCCCACAGTTGCCA...ACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CAA 90 bp ATGTCGTTCTCTTCAGCAAAGGCAAGCAGGATCCGCACTATCTCCTaGGTGTTGGGGTTGATGTTTAACAAGGCCTTCATCAGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: MSFSSAKASRIRTIS*VLGLMFNKAFIRQV
Trigger: GACCTGCCTGATGAAGGCCTTGTTAAACATCAACCCCAACACCAAGGAGATAGTGCGGATCCTGCTTGCCTTTGCTGAAGAGAACGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp TTAGCCTCTGGGCGTAAAATGAAGGAAGTGCTCCTTTTCACTCTGATGCTTCTTAGTTCAGACACCCACTaGGCACTGAGCACGAGGGTG +
Preference number: 2 (lower is better)
Translates to: LASGRKMKEVLLFTLMLLSSDTH*ALSTRV
Trigger: CACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACT...AAGAAGCATCAGAGTGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp AAGAGAATGGGATACTTGGAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGTCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 2 (lower is better)
Translates to: KRMGYLEFCWMFRSPRPMSTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...CATAGGCCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp TTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCACCCACTGAGACATACTaGGGTATGCGACTAACTGCT +
Preference number: 2 (lower is better)
Translates to: LLSLGHFSISEAKATPNPPTETY*GMRLTA
Trigger: AGCAGTTAGTCGCATACCTCAGTATGTCTCAGTGGG...TGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR GCA 90 bp CCAAGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 2 (lower is better)
Translates to: PSNKIQDVSHSDKLTTAPPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...AGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp GGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTTTTGCTGTTCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 2 (lower is better)
Translates to: GFREFLDFFKCIESGFAVPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...AACAGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGGCTCCTCAAGACTGCTaGCCCTTTCCCGCCATCCAT +
Preference number: 2 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMAPQDC*PFPAIH
Trigger: ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGC...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR GCA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTCGACTTCTTCAAATaGATTGAGAGTGGTTTTGCT +
Preference number: 2 (lower is better)
Translates to: HPRPLCTALPSGICSSAILDFFK*IESGFA
Trigger: AGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAG...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGAGGCCGTCAGCTTGTaGATGAGGAAGTCAGGCACA +
Preference number: 2 (lower is better)
Translates to: LLHRGFREFLDFFKCIESEAVSL*MRKSGT
Trigger: TGTGCCTGACTTCCTCATGCACAAGCTGACGGCCTC...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAGGATCATGTCGTACATaGGCTTCACAAAGTCATTCT +
Preference number: 2 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGGSCRT*ASQSHS
Trigger: AGAATGACTTTGTGAAGCGCATGTACGACATGATCC...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp CTCCGGAGCCGCTTCTCCTTGATCTCACGACTGAGGATGTACTTCAGGATCTCCGGATCATGTCGTACATaGGCTTCACAAAGTCATTCT +
Preference number: 2 (lower is better)
Translates to: LRSRFSLISRLRMYFRISGSCRT*ASQSHS
Trigger: AGAATGACTTTGTGAAGCGCATGTACGACATGATCC...GGAGATCCTGAAGTACATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp GTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGCACAGCTCAGGATCTCCGCCTTaGCCATCTTGGCGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: VLFVGKQVQEDRQYHKHSSGSPP*PSWRPA
Trigger: AGCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGA...GCTGTGCTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571139.5
3UTR-3UTR GCA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGC +
Preference number: 2 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMILPRS*SHPILC
Trigger: GCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp AAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 2 (lower is better)
Translates to: KSSSATLHSSPIRNLLLSREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...GCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CCA 90 bp TGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGTCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: WILLKSAVRLTGPGSSLRSQTPR*SWLSAG
Trigger: GCCTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...CCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTCAGGAGGAGAGGTCTTaGCAACTGTGGGGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: LLHRGFREFLDFFKCIESQEERS*QLWGWV
Trigger: AACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTG...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACAGGATGTTGGAATCCATaGGCTTGGAGAAGACAGGAG +
Preference number: 2 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTGCWNP*AWRRQE
Trigger: CTCCTGTCTTCTCCAAGCCCATGGATTCCAACATCC...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCCAGCTTGAGACAGTTTaGACCTTGGGGTGTCAGGGG +
Preference number: 2 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFQLETV*TLGCQG
Trigger: CCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTG...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR TCA 90 bp GGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCAAAACATCTCTCAGCTTaGGACAGTTTGAACCTTGGG +
Preference number: 2 (lower is better)
Translates to: GFRFYTEVSGNSSTSSNAKHLSA*DSLNLG
Trigger: CCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTT...TGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR TCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACCCAGATGTGGAATGCTaGTTTGTACAATCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYPDVEC*FVQSPG
Trigger: GCCTGGAGATTGTACAAATCAGCATTCCACATCTGG...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCA +
Preference number: 2 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMSHSAS*SPRPRS
Trigger: TGACCGTGGCCGAGGACTTCAAGACGCAGAATGACT...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp GTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACACAGTCGGAAATCAAGTGATTTCCAGCACTaGGTTGTCCGTGGTGGTGTC +
Preference number: 2 (lower is better)
Translates to: VFHSVHFTSLIRKHSRKSSDFQH*VVRGGV
Trigger: GACACCACCACGGACAACTCAGTGCTGGAAATCACT...TGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 2 (lower is better)
Translates to: CLNISNIWSSCWILLSQNPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCAAAGACTCCTCTCCCTaGTCCTCAAGACTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFKDSSP*SSRLLP
Trigger: GGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTT...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR GCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACAGCAGCTGCTATTTCTaGTTCAGCGAAAGCCACGAT +
Preference number: 2 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYSSCYF*FSESHD
Trigger: ATCGTGGCTTTCGCTGAAGCAGAAATAGCAGCTGCT...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp TTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCATCATGGCGCCGCCTaGAAAGCTCCTGCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: LFLEESWILLKSAVRLTGHHGAA*KAPAAP
Trigger: TGGAGCTGCAGGAGCTTTGCAGGCGGCGCCATGATG...GCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACAAGTCCTTGTTGTCTTTaGGACACTTCTCGATCAGCG +
Preference number: 2 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTSPCCL*DTSRSA
Trigger: CGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACT...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTCCCACTCAGACAAATTaGCAACTGCCCCTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: LLHRGFREFLDFFKCIESPTQTN*QLPLSS
Trigger: TGAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGG...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR TCA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACATGGTGTTGTAGACAGTaGTTTCCAGCACTGAGTTGT +
Preference number: 2 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTWCCRQ*FPALSC
Trigger: ACAACTCAGTGCTGGAAATCACTGTCTACAACACCA...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGCGTTCACTCCAAGGATaGTCTCCTTTTCCCCGAAGG +
Preference number: 2 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMRSLQG*SPFPRR
Trigger: CCTTCGGGGAAAAGGAGACCATCCTTGGAGTGAACG...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTAGACAGTTTGAACCTTaGGGTGTCAGGGGACGTTCA +
Preference number: 2 (lower is better)
Translates to: LLHRGFREFLDFFKCIESRQFEP*GVRGRS
Trigger: TGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCT...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACGAAAGCCTTTTGGGGTaGACACTGTTGGGAAGAATA +
Preference number: 2 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYESLLG*TLLGRI
Trigger: TATTCTTCCCAACAGTGTCCACCCCAAAAGGCTTTC...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTAGGTCTTGGCAACTGTaGGGTTGGGTTCAAACCCTT +
Preference number: 2 (lower is better)
Translates to: LLHRGFREFLDFFKCIESRSWQL*GWVQTL
Trigger: AAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCT...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCTGCCCAAGGTTACATaGTCTGAGACAGGAGCGGAC +
Preference number: 2 (lower is better)
Translates to: PTRVLKVRAGRDLRSISILPKVT*SETGAD
Trigger: GTCCGCTCCTGTCTCAGACCATGTAACCTTGGGCAG...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
3UTR-3UTR TCA 90 bp TCAATAATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACCTCTGGGCGTAAAATaGAGGAAGTGCTCCTTTTCA +
Preference number: 2 (lower is better)
Translates to: SIIKGSLRLEPSKSLKTSPLGVK*RKCSFS
Trigger: TGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGG...TGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTATTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp GGCGAGGTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGGGATACTTGGAGTTCTaGTGGATGTTCAGGTCACCC +
Preference number: 2 (lower is better)
Translates to: GEVLFVGKQVQEDRQYHKGYLEF*WMFRSP
Trigger: GGGTGACCTGAACATCCAGCAGAACTCCAAGTATCC...CTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTACCTCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571139.5
3UTR-3UTR CCA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCATCACAGCAGAAGAGATaGTACAATGTGTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LTAEFQDDIDRAAAISASSQQKR*YNVWAG
Trigger: CCCAGCCCACACATTGTACCATCTCTTCTGCTGTGA...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CCA 90 bp CTGGATACGGCTTTATCCATAACAGATACGGCTTTATCCATTAATGGATATGACACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 2 (lower is better)
Translates to: LDTALSITDTALSINGYDTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...GTCATATCCATTAATGGATAAAGCCGTATCTGTTATGGATAAAGCCGTATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR CCA 90 bp AAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCTTTTGCTGTTGTTCCTaGAAGAATCTTGGATTTTGT +
Preference number: 2 (lower is better)
Translates to: KSSSATLHSSPIRNLLLSFCCCS*KNLGFC
Trigger: ACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAA...GCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CCA 90 bp GGCGAGGTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGGCTGTTGGGATTGGATaGGGTCTCTGTCACATCATC +
Preference number: 2 (lower is better)
Translates to: GEVLFVGKQVQEDRQYHKAVGIG*GLCHII
Trigger: GATGATGTGACAGAGACCCCATCCAATCCCAACAGC...CTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTACCTCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571139.5
3UTR CAA 90 bp TGGGGTGGACACTGTTGGGAAGAATATCCAATACAGAAAATGGTCTaGCCAACAAATTCCATCCAGACCCACAGACAGCAGATCACCAAA +
Preference number: 2 (lower is better)
Translates to: WGGHCWEEYPIQKMV*PTNSIQTHRQQITK
Trigger: TTTGGTGATCTGCTGTCTGTGGGTCTGGATGGAATTTGTTGGCAAGACCATTTTCTGTATTGGATATTCTTCCCAACAGTGTCCACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp CTTGGCATCATGAATCCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCAAACATCTCTCAGCTTaGGACAGTTTGAACCTTGGG +
Preference number: 2 (lower is better)
Translates to: LGIMNPNHFLSDQDVCSGKHLSA*DSLNLG
Trigger: CCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTT...GCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGGATTCATGATGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp AAAAGCTTTTTGTCTTGCTCTGGGCACCCTGAGGCCAAATATATAATACTTACAAAAGACTCCTCTCCCTaGTCCTCAAGACTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: KSFLSCSGHPEAKYIILTKDSSP*SSRLLP
Trigger: GGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTT...TGTAAGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAAGACAAAAAGCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CCA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATTACTTGGAGTTCTGCTaGATGTTCAGGTCACCCAGG +
Preference number: 2 (lower is better)
Translates to: CLNISNIWSSCWILLSQNYLEFC*MFRSPR
Trigger: CCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTA...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR CCA 90 bp TGCAGTCCTTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCTTTTGCTGTTGTTCCTaGAAGAATCTTGGATTTTGT +
Preference number: 2 (lower is better)
Translates to: CSPCCLWDTSRSARPRLLFCCCS*KNLGFC
Trigger: ACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAA...GAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp GCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACTGGGGCTGTTGGGATTaGATGGGGTCTCTGTCACAT +
Preference number: 2 (lower is better)
Translates to: AVVPGRILDFVEICCSSYWGCWD*MGSLSH
Trigger: ATGTGACAGAGACCCCATCCAATCCCAACAGCCCCA...GTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp GTAAATGAGAATTTACAAGGATCCGGCACATTCAAGGGAGAATGGGGTGACGATAAACATCTCTCAGCTTaGGACAGTTTGAACCTTGGG +
Preference number: 2 (lower is better)
Translates to: VNENLQGSGTFKGEWGDDKHLSA*DSLNLG
Trigger: CCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTT...ATCGTCACCCCATTCTCCCTTGAATGTGCCGGATCCTTGTAAATTCTCATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACATATCGCCATGTTATCTaGAGGCCAAATTTCTATTTC +
Preference number: 2 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTYRHVI*RPNFYF
Trigger: GAAATAGAAATTTGGCCTTCAGATAACATGGCGATA...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR TCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACTATCGCCATGTTATCTaGAGGCCAAATTTCTATTTC +
Preference number: 2 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYYRHVI*RPNFYF
Trigger: GAAATAGAAATTTGGCCTTCAGATAACATGGCGATA...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp TGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGCTCGACTTCTTCAAATaGATTGAGAGTGGTTTTGCT +
Preference number: 2 (lower is better)
Translates to: WILLKSAVRLTGPGSSLRLDFFK*IESGFA
Trigger: AGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAG...CCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGATTTTGTTGAAATCTaGTGTTCGTCTTACAGGCCC +
Preference number: 2 (lower is better)
Translates to: LLHRGFREFLDFFKCIESDFVEI*CSSYRP
Trigger: GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATC...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR GCA 90 bp GTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGCACAGCTTACCAGAGATGCACTaGCGGATGTTGGAATCCATG +
Preference number: 2 (lower is better)
Translates to: VLFVGKQVQEDRQYHKHSLPEMH*RMLESM
Trigger: CATGGATTCCAACATCCGGCAGTGCATCTCTGGTAA...GCTGTGCTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571139.5
3UTR-3UTR GCA 90 bp TTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCGCAGGAAGATGGCAATaGCCTCTTTCACAGAGATGC +
Preference number: 2 (lower is better)
Translates to: LFLEESWILLKSAVRLTGAGRWQ*PLSQRC
Trigger: GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGC...GCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR TCA 90 bp AAAAGCTTTTTGTCTTGCTCTGGGCACCCTGAGGCCAAATATATAATACTTACACCCACTCAGACAAATTaGCAACTGCCCCTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: KSFLSCSGHPEAKYIILTPTQTN*QLPLSS
Trigger: TGAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGG...TGTAAGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAAGACAAAAAGCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR TCA 90 bp TTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCTTGGTGTTGGGGTTaGTGTTTAACAAGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: LFLEESWILLKSAVRLTGPWCWG*CLTRPS
Trigger: TGAAGGCCTTGTTAAACATCAACCCCAACACCAAGG...GCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR GCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTTAGACTTGATCTaGCCAAGGTTACATGGTCTG +
Preference number: 2 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQPLDLI*PRLHGL
Trigger: CAGACCATGTAACCTTGGGCAGATCAAGTCTAAGGG...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
3UTR-3UTR CCA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTGCTGTTGGGATTGGATaGGGTCTCTGTCACATCATC +
Preference number: 2 (lower is better)
Translates to: FAVVPGRILDFVEICCSSAVGIG*GLCHII
Trigger: GATGATGTGACAGAGACCCCATCCAATCCCAACAGC...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACTCCCATTTGACAGATaGGGAAAGTCAGGACCCTTA +
Preference number: 2 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQLPFDR*GKSGPL
Trigger: TAAGGGTCCTGACTTTCCCCATCTGTCAAATGGGAG...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
3UTR-3UTR TCA 90 bp TCAATAATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCATATCGCCATGTTATCTaGAGGCCAAATTTCTATTTC +
Preference number: 2 (lower is better)
Translates to: SIIKGSLRLEPSKSLKTSYRHVI*RPNFYF
Trigger: GAAATAGAAATTTGGCCTTCAGATAACATGGCGATA...TGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTATTATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTAGACAAATTGACAACTaGCCCTCAGTTCAGACACCC +
Preference number: 2 (lower is better)
Translates to: FAVVPGRILDFVEICCSSRQIDN*PSVQTP
Trigger: GGGTGTCTGAACTGAGGGGCAGTTGTCAATTTGTCT...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577016.5
3UTR CAA 90 bp GGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTTTTGCTGTaGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGT +
Preference number: 2 (lower is better)
Translates to: GNSSTSSNALRVVLL*FLEESWILLKSAVR
Trigger: ACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR CAA 90 bp GGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTTTTGCTGTaGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGTTCGTCTT +
Preference number: 2 (lower is better)
Translates to: GNSSTSSNALRVVLL*FLEESWILLKSVRL
Trigger: AAGACGAACAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR CAA 90 bp TTCTGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTaGAGCCAAAATCTTTCTCAATTTCCTAATTCTGCCCATTCTGAA +
Preference number: 2 (lower is better)
Translates to: FCLNISNIWSSCWIL*SQNLSQFPNSAHSE
Trigger: TTCAGAATGGGCAGAATTAGGAAATTGAGAAAGATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR GCA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTGATTTTGTTGAAATCTaGTGTTCGTCTTACAGGCCC +
Preference number: 2 (lower is better)
Translates to: FAVVPGRILDFVEICCSSDFVEI*CSSYRP
Trigger: GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATC...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR GCA 72 bp CGCGTTGACGTCGGCGCCGGCGGCGATGAGCAGGGCTaGGATGTCCCCCTGCCGCCGCTCGATGGCGATGTT +
Preference number: 3 (lower is better)
Translates to: RVDVGAGGDEQG*DVPLPPLDGDV
Trigger: AACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCGACGTCAACGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp ATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCTCCGCCTTGCCCATCTaGGCGGCCAGCTGCAGCGGC +
Preference number: 3 (lower is better)
Translates to: ILPRSCSHPILCVRAKGCSALPI*AASCSG
Trigger: GCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGGA...GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp GAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCGGGATGGCCTCGGCGTGAGGCCATCGTaGTTGCGAGTGGTCTCCAGC +
Preference number: 3 (lower is better)
Translates to: ELQPPHLVRQGQGVRDGLGVRPS*LRVVSS
Trigger: GCTGGAGACCACTCGCAACAACGATGGCCTCACGCC...GAGGCCATCCCGCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp TGTTGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTaGGCGTTGACGTCGGCGCCGGCGGCGATGAGCAGG +
Preference number: 3 (lower is better)
Translates to: CWYLGLKKAPLA*ALTSAPAAMSR
Trigger: CCTGCTCATCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CCA 72 bp CGTGCTCCATCAGCAGCTGCACAATCTCGGGCTGGTTaGTGCATGCTGCCAGGGCCAGGGGCGTCTCACCGA +
Preference number: 3 (lower is better)
Translates to: RAPSAAAQSRAG*CMLPGPGASHR
Trigger: TCGGTGAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGACGTCGGCGCCGTCGGAGGCCGTCAGCTaGTGCATGAGGAAGTCAGGC +
Preference number: 3 (lower is better)
Translates to: WYLGLKKAPLACALTSAPSEAVS*CMRKSG
Trigger: GCCTGACTTCCTCATGCACAAGCTGACGGCCTCCGA...CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp AGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCGCCTGCAGCGCCAGAC +
Preference number: 3 (lower is better)
Translates to: SRAGLHHPSKPL*TESVTPPAAPD
Trigger: GTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR GCA 72 bp TTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTaGCCAGAGCGAAAGGTCACAGGTCACCAGGCCTTG +
Preference number: 3 (lower is better)
Translates to: LQARMTAHLPGP*PERKVTGHQAL
Trigger: CAAGGCCTGGTGACCTGTGACCTTTCGCTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CCA 72 bp CCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTC +
Preference number: 3 (lower is better)
Translates to: PAAPDSARAHQL*VPLLHRGFREF
Trigger: GAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR CCA 72 bp TGCTCGTGCTCCATCAGCAGCTGCACAATCTCGGGCTaGTTGGTGCATGCTGCCAGGGCCAGGGGCGTCTCA +
Preference number: 3 (lower is better)
Translates to: CSCSISSCTISG*LVHAARARGVS
Trigger: TGAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCACGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGACGTCGGCGCCGCTGGGGCTGTTGGGATaGGATGGGGTCTCTGTCACA +
Preference number: 3 (lower is better)
Translates to: WYLGLKKAPLACALTSAPLGLLG*DGVSVT
Trigger: TGTGACAGAGACCCCATCCAATCCCAACAGCCCCAG...CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp GAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCGGGATGGCCTCATTTCCAGCACTGAGTaGTCCGTGGTGGTGTCCACG +
Preference number: 3 (lower is better)
Translates to: ELQPPHLVRQGQGVRDGLISSTE*SVVVST
Trigger: CGTGGACACCACCACGGACAACTCAGTGCTGGAAAT...GAGGCCATCCCGCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp GTGCGCGTTGACGTCGGCGCCGGCGGCGATGAGCAGGGCTGCGATGTCCCCCTGGCATTGAGAGTGGTTTaGCTGTTGTTCCTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: VRVDVGAGGDEQGCDVPLALRVV*LLFLEE
Trigger: TTCTTCCAGGAACAACAGCAAAACCACTCTCAATGC...CAGGGGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCGACGTCAACGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACAATGCACTGCCGGATGTaGGAATCCATGGGCTTGGAG +
Preference number: 3 (lower is better)
Translates to: ACSARQRTRTPALGSASTMHCRM*ESMGLE
Trigger: CTCCAAGCCCATGGATTCCAACATCCGGCAGTGCAT...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp ATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCCCTTCGTGTTGGTACTaGGGGTTGAAGAAGGCCCCC +
Preference number: 3 (lower is better)
Translates to: ILPRSCSHPILCVRAKGCPSCWY*GLKKAP
Trigger: GGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGG...GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp CACGGTCACCAGGGCGTGAAGGATGTTGTTGCCTCGTaGGTCCCGCGAGGTGATGTCCGTCTGCTCGTGCTC +
Preference number: 3 (lower is better)
Translates to: HGHQGVKDVVAS*VPRGDVRLLVL
Trigger: GAGCACGAGCAGACGGACATCACCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp TGCGTCTTGAAGTCCTCGGCCACGGTCACCAGGGCGTaGAGGATGTTGTTGCCTCGTGAGTCCCGCGAGGTG +
Preference number: 3 (lower is better)
Translates to: CVLKSSATVTRA*RMLLPRESREV
Trigger: CACCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTGGCCGAGGACTTCAAGACGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp CCTCGTGAGTCCCGCGAGGTGATGTCCGTCTGCTCGTaGTCCATCAGCAGCTGCACAATCTCGGGCTGGTTG +
Preference number: 3 (lower is better)
Translates to: PRESREVMSVCS*SISSCTISGWL
Trigger: CAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCACGAGCAGACGGACATCACCTCGCGGGACTCACGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CCA 72 bp TCTTCTCCAGAGGCCCATGCCCAGCCCCGACCACTGTaGCTTAGAGCACGCGATTACTCCCTGGGTCAGCTG +
Preference number: 3 (lower is better)
Translates to: SSPEAHAQPRPL*LRARDYSLGQL
Trigger: CAGCTGACCCAGGGAGTAATCGCGTGCTCTAAGCCACAGTGGTCGGGGCTGGGCATGGGCCTCTGGAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp CGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTTCGGAGGCCGTCAGCTaGTGCATGAGGAAGTCAGGC +
Preference number: 3 (lower is better)
Translates to: RTRTPALGSASTPRFPGISEAVS*CMRKSG
Trigger: GCCTGACTTCCTCATGCACAAGCTGACGGCCTCCGA...AATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp CCAGCACTGAGTTGTCCGTGGTGGTGTCCACGTTGGTaGGGTCGTAGAGGGAGGATGACACGGGTCCGTACG +
Preference number: 3 (lower is better)
Translates to: PALSCPWWCPRW*GRRGRMTRVRT
Trigger: CGTACGGACCCGTGTCATCCTCCCTCTACGACCTCACCAACGTGGACACCACCACGGACAACTCAGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp GGCACATCCTCATCATGGCGCCGCCTGCAAAGCTCCTaGAGCTCCACCAGCAACTCTACCAACTCCTCCACG +
Preference number: 3 (lower is better)
Translates to: GTSSSWRRLQSS*SSTSNSTNSST
Trigger: CGTGGAGGAGTTGGTAGAGTTGCTGGTGGAGCTGCAGGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp TTGTTGCCTCGTGAGTCCCGCGAGGTGATGTCCGTCTaGTCGTGCTCCATCAGCAGCTGCACAATCTCGGGC +
Preference number: 3 (lower is better)
Translates to: LLPRESREVMSV*SCSISSCTISG
Trigger: GCCCGAGATTGTGCAGCTGCTGATGGAGCACGAGCAGACGGACATCACCTCGCGGGACTCACGAGGCAACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp ATGGCCCAGATGAGCACAAACATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGG +
Preference number: 3 (lower is better)
Translates to: MAQMSTNILPRS*SHPILCVRAKG
Trigger: CCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGATGTTTGTGCTCATCTGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGG +
Preference number: 3 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPASSSAT*HSSPIR
Trigger: CCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGA...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CAA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAGCGGCCCAGCAGGACTaGCCCGGAGTGTCTCATGCA +
Preference number: 3 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGAAQQD*PGVSHA
Trigger: TGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCGC...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR CAA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAGCGGCCCAGCAGGACTaGCCCGGAGTGTCTCATGCA +
Preference number: 3 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGAAQQD*PGVSHA
Trigger: TGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCGC...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGATCCGCACTATCTCCTaGGTGTTGGGGTTGATGTTT +
Preference number: 3 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQIRTIS*VLGLMF
Trigger: AAACATCAACCCCAACACCAAGGAGATAGTGCGGAT...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TGCAGCGGCGTGAGGCCATCGTTGTTGCGAGTGGTCTCCAGCTCCCAGTTGCCATCTGTGTACTCGGCGTaGATGAACCTGCCCAGGATG +
Preference number: 3 (lower is better)
Translates to: CSGVRPSLLRVVSSSQLPSVYSA*MNLPRM
Trigger: CATCCTGGGCAGGTTCATCAACGCCGAGTACACAGA...TGGCAACTGGGAGCTGGAGACCACTCGCAACAACGATGGCCTCACGCCGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp CACAGAGTGGCCCAGGGCAGAGAAACTGGCCCAGAGTaGACTGCTAGGCCCCGACTCTTCAGTTTGCCTCAA +
Preference number: 3 (lower is better)
Translates to: HRVAQGRETGPE*TARPRLFSLPQ
Trigger: TTGAGGCAAACTGAAGAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTCTCTGCCCTGGGCCACTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CCA 72 bp TGTCCTGATAGACCCACGGGTTCAACGGGGTGTGTGTaGGGGCTGAGGGTGTGTGTGTGCATGGGTGTGGTT +
Preference number: 3 (lower is better)
Translates to: CPDRPTGSTGCV*GLRVCVCMGVV
Trigger: AACCACACCCATGCACACACACACCCTCAGCCCCCACACACACCCCGTTGAACCCGTGGGTCTATCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp TGCAGCGGCGTGAGGCCATCGTTGTTGCGAGTGGTCTCCAGCTCCCAGTTGCCAGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 3 (lower is better)
Translates to: CSGVRPSLLRVVSSSQLPELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...TGGCAACTGGGAGCTGGAGACCACTCGCAACAACGATGGCCTCACGCCGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCTTGAAGAAGGCCCCCTaGGCGTGCGCGTTGACGTCG +
Preference number: 3 (lower is better)
Translates to: KTKWNQASERMDCRSEGLLKKAP*ACALTS
Trigger: CGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAA...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp AGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTGCGTCGCTGAAGGTGAGGCCATCGTTGTaGCGAGTGGTCTCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: RSPRPMVSLKSSSTASLKVRPSL*RVVSSS
Trigger: GGAGCTGGAGACCACTCGCAACAACGATGGCCTCAC...CTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TTCATCAGGCAGGTCTTCCCCGTGTCGGAGGCCGTCAGCTTGTGCATGAGGAAGAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCG +
Preference number: 3 (lower is better)
Translates to: FIRQVFPVSEAVSLCMRKRPMVS*KSSSTA
Trigger: CGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCT...CTTCCTCATGCACAAGCTGACGGCCTCCGACACGGGGAAGACCTGCCTGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp CGGCCACGGTCACCAGGGCGTGAAGGATGTTGTTGCCTCGTGAGTCCCGCGAGGAAGAGAATGGGATACTaGGAGTTCTGCTGGATGTTC +
Preference number: 3 (lower is better)
Translates to: RPRSPGREGCCCLVSPARKRMGY*EFCWMF
Trigger: GAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT...CCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 3 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CAA 90 bp ACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTTCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGG +
Preference number: 3 (lower is better)
Translates to: TPALGSASTPRFPGIPRLSSSAT*HSSPIR
Trigger: CCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGA...AAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CAA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCTGTTGGTACTTGGGGTaGAAGAAGGCCCCCTTGGCG +
Preference number: 3 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFCWYLG*KKAPLA
Trigger: CGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACA...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp GAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCGGCGTGAGGCCATCGTaGTTGCGAGTGGTCTCCAGC +
Preference number: 3 (lower is better)
Translates to: EFCWMFRSPRPMVSLKSSGVRPS*LRVVSS
Trigger: GCTGGAGACCACTCGCAACAACGATGGCCTCACGCC...GGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp TCAATGCAGAAATCAAGTACGGCTTACAGGCCCGGATaGCGGCCCATCTACCTGGGCCCTGCCCAGAGCGAA +
Preference number: 3 (lower is better)
Translates to: SMQKSSTAYRPG*RPIYLGPAQSE
Trigger: TTCGCTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTTGATTTCTGCATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR GCA 72 bp ACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTAGGAGCTGCAGTCCTT +
Preference number: 3 (lower is better)
Translates to: TQAYGELEEFQH*VAEAAVGAAVL
Trigger: AAGGACTGCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp ACTCCTCCACGCAGCCCTCAGACACGGCTGCAAAGATaGGCTTCTTCAGCCGCCTCTTTTTCCTCCTCTGCT +
Preference number: 3 (lower is better)
Translates to: TPPRSPQTRLQR*ASSAASFSSSA
Trigger: AGCAGAGGAGGAAAAAGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGCTGCGTGGAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp GGCCATCGTTGTTGCGAGTGGTCTCCAGCTCCCAGTTaGCACTCCGCAGTAGGATCATGTCGTACATGCGCT +
Preference number: 3 (lower is better)
Translates to: GHRCCEWSPAPS*HSAVGSCRTCA
Trigger: AGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGACCACTCGCAACAACGATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CCA 72 bp TATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATaGGATCACGGGTCTCCCACAAATTCAGGCAACCCA +
Preference number: 3 (lower is better)
Translates to: YPAYLRPPHTLG*DHGSPTNSGNP
Trigger: TGGGTTGCCTGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CAA 90 bp CACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCCAAGCCGACCTGCAATaGGTAAAACCAGAGGCTTCA +
Preference number: 3 (lower is better)
Translates to: HAHTSSGFRFYTEVSGNSQADLQ*VKPEAS
Trigger: TGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTG...GGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CAA 90 bp GGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCG +
Preference number: 3 (lower is better)
Translates to: GPGSSLRKETCVFHSVHFRPMVS*KSSSTA
Trigger: CGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCT...GAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp ATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCTCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGG +
Preference number: 3 (lower is better)
Translates to: IRKHSRKSSSATLHSSPISSSAT*HSSPIR
Trigger: CCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGA...GATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CAA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 3 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CAA 90 bp TGGTCTCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTAAGTCATTCTGCGTCTaGAAGTCCTCGGCCACGGTC +
Preference number: 3 (lower is better)
Translates to: WSPAPSCHSAVGSCRTCAKSFCV*KSSATV
Trigger: GACCGTGGCCGAGGACTTCAAGACGCAGAATGACTT...AGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp AAAGCCACGATCCCAGCACACAGGCACGCGCTACTGTaGGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCA +
Preference number: 3 (lower is better)
Translates to: KATIPAHRHALL*GQDEEKSQDLS
Trigger: TGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACAGTAGCGCGTGCCTGTGTGCTGGGATCGTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR GCA 72 bp TCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGAATCTGCTCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: SANTVGNHPRPL*TALPSGICSSA
Trigger: GGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR GCA 72 bp CTCTACCAACTCCTCCACGCAGCCCTCAGACACGGCTaGAAAGATGCGCTTCTTCAGCCGCCTCTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: LYQLLHAALRHG*KDALLQPPLFP
Trigger: AGGAAAAAGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGCTGCGTGGAGGAGTTGGTAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CCA 72 bp ATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTaGCACACAGAGTGGCCCAGGGCAGAGAAACTGGCC +
Preference number: 3 (lower is better)
Translates to: IRGTKSLSVQLV*HTEWPRAEKLA
Trigger: GGCCAGTTTCTCTGCCCTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 3 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CAA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 3 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR TCA 72 bp TGTCGTACATGCGCTTCACAAAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCACCAGGGCGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: CRTCASQSHSAS*SPRPRSPGREG
Trigger: TCCTTCACGCCCTGGTGACCGTGGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp CAATGCCCTCTTTCACAGAGATGCACATGGCCCAGATaGGCACAAACATCCTCCCTAGGAGCTGCAGCCACC +
Preference number: 3 (lower is better)
Translates to: QCPLSQRCTWPR*AQTSSLGAAAT
Trigger: GGTGGCTGCAGCTCCTAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCATCTCTGTGAAAGAGGGCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp AGGATCATGTCGTACATGCGCTTCACAAAGTCATTCTaGGTCTTGAAGTCCTCGGCCACGGTCACCAGGGCG +
Preference number: 3 (lower is better)
Translates to: RIMSYMRFTKSF*VLKSSATVTRA
Trigger: CGCCCTGGTGACCGTGGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACATGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp TTGGCAAACTTCTTCCACTTCATATGCAGCAGCGTGTaGAGCGGCTCCAGGGTCAGCATCTCATGCCGGTTG +
Preference number: 3 (lower is better)
Translates to: LANFFHFICSSV*SGSRVSISCRL
Trigger: CAACCGGCATGAGATGCTGACCCTGGAGCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAAGTTTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAAAACATCTCTCAGCTaGAGACAGTTTGAACCTTGG +
Preference number: 3 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPKTSLS*RQFEPW
Trigger: CCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTT...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CAA 90 bp AGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTGCGTCGCTGAAGCAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 3 (lower is better)
Translates to: RSPRPMVSLKSSSTASLKQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...CTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTTCACAGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 3 (lower is better)
Translates to: SSSQLPLRSRIMSYMRFTVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...TGTGAAGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGATTGGCTGAAAGCCTTTaGGGGTGGACACTGTTGGGA +
Preference number: 3 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGLAESL*GWTLLG
Trigger: TCCCAACAGTGTCCACCCCAAAAGGCTTTCAGCCAA...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCACTGGGGCTGTTGGGATaGGATGGGGTCTCTGTCACA +
Preference number: 3 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSLGLLG*DGVSVT
Trigger: TGTGACAGAGACCCCATCCAATCCCAACAGCCCCAG...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp ACAGTGATTTCCAGCACTGAGTTGTCCGTGGTGGTGTCCACGTTGGTGAGGTCGCAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 3 (lower is better)
Translates to: TVISSTELSVVVSTLVRSQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...CGACCTCACCAACGTGGACACCACCACGGACAACTCAGTGCTGGAAATCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp GGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATAAGAGAATGGGATACTaGGAGTTCTGCTGGATGTTC +
Preference number: 3 (lower is better)
Translates to: GKTPLPAPQDCCPFPAIHKRMGY*EFCWMF
Trigger: GAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT...ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CAA 90 bp CTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCTTGGCAACTGTGGGGTaGGGTTCAAACCCTTCTATC +
Preference number: 3 (lower is better)
Translates to: LTGPGSSLRKETCVFHSVLATVG*GSNPSI
Trigger: GATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAA...GACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCACGGAGCCGCTTCTCCTaGATCTCACGACTGAGGATG +
Preference number: 3 (lower is better)
Translates to: LLSLGHFSISEAKATPNPRSRFS*ISRLRM
Trigger: CATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCG...TGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp GTCGATGTTGGTGTTGTAGACAGTGATTTCCAGCACTaGGTTGTCCGTGGTGGTGTCCACGTTGGTGAGGTC +
Preference number: 3 (lower is better)
Translates to: VDVGVVDSDFQH*VVRGGVHVGEV
Trigger: GACCTCACCAACGTGGACACCACCACGGACAACTCAGTGCTGGAAATCACTGTCTACAACACCAACATCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp CCTCCCGGGGGCGGTAGTACGAGACGAGGGTCAGGGTaGTGTTGTAGAAGAAATAAAAGCAGAAGGACAGAA +
Preference number: 3 (lower is better)
Translates to: PPGGGSTRRGSG*CCRRNKSRRTE
Trigger: TTCTGTCCTTCTGCTTTTATTTCTTCTACAACATCACCCTGACCCTCGTCTCGTACTACCGCCCCCGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp GCCCAGAGTGCACTGCTAGGCCCCGACTCTTCAGTTTaGCTCAAGCCAGATGAACTTATCTATCGCCATGTT +
Preference number: 3 (lower is better)
Translates to: AQSALLGPDSSV*LKPDELIYRHV
Trigger: AACATGGCGATAGATAAGTTCATCTGGCTTGAGGCAAACTGAAGAGTCGGGGCCTAGCAGTGCACTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CCA 72 bp AGTTACCAGAGATGCACTGCCGGATGTTGGAATCCATaGGCTTGGAGAAGACAGGAGGAGAGGTCTTGGCAA +
Preference number: 3 (lower is better)
Translates to: SYQRCTAGCWNP*AWRRQEERSWQ
Trigger: TTGCCAAGACCTCTCCTCCTGTCTTCTCCAAGCCCATGGATTCCAACATCCGGCAGTGCATCTCTGGTAACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCAAAACATCTCTCAGCTaGAGACAGTTTGAACCTTGG +
Preference number: 3 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSKTSLS*RQFEPW
Trigger: CCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTT...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CAA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCAAAACATCTCTCAGCTaGAGACAGTTTGAACCTTGG +
Preference number: 3 (lower is better)
Translates to: KGSGRVFPERIPLLPQDIKTSLS*RQFEPW
Trigger: CCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTT...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CAA 90 bp GGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCAGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 3 (lower is better)
Translates to: GFRFYTEVSGNSSTSSNAELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...TGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACAAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCG +
Preference number: 3 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTRPMVS*KSSSTA
Trigger: CGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCT...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGACAGGAGGAGAGGTCTaGGCAACTGTGGGGTTGGGT +
Preference number: 3 (lower is better)
Translates to: WILLKSAVRLTGPGSSLRTGGEV*ATVGLG
Trigger: ACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGT...CCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCATCCGCACTATCTCCTaGGTGTTGGGGTTGATGTTT +
Preference number: 3 (lower is better)
Translates to: KTKWNQASERMDCRSEGLIRTIS*VLGLMF
Trigger: AAACATCAACCCCAACACCAAGGAGATAGTGCGGAT...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp AAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCAAGAGAATGGGATACTaGGAGTTCTGCTGGATGTTC +
Preference number: 3 (lower is better)
Translates to: KSSSATLHSSPIRNLLLSKRMGY*EFCWMF
Trigger: GAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT...GCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CAA 90 bp CTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGGTCCTGGCTATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 3 (lower is better)
Translates to: LLLSHSGNIFSNSKMVLAMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...AGCCAGGACCATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CAA 90 bp TTCACCTCATTGATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 3 (lower is better)
Translates to: FTSLIRKHSRKSSSATLHVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...GTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR TCA 72 bp CAAGCAGGATCCGCACTATCTCCTTGGTGTTGGGGTTaGTGTTTAACAAGGCCTTCATCAGGCAGGTCTTCC +
Preference number: 3 (lower is better)
Translates to: QAGSALSPWCWG*CLTRPSSGRSS
Trigger: GGAAGACCTGCCTGATGAAGGCCTTGTTAAACATCAACCCCAACACCAAGGAGATAGTGCGGATCCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp TCTCATGCCGGTTGTCGATGTTGGTGTTGTAGACAGTaGTTTCCAGCACTGAGTTGTCCGTGGTGGTGTCCA +
Preference number: 3 (lower is better)
Translates to: SHAGCRCWCCRQ*FPALSCPWWCP
Trigger: TGGACACCACCACGGACAACTCAGTGCTGGAAATCACTGTCTACAACACCAACATCGACAACCGGCATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp AGCAGGAACAGAAAGAGAATGGGATACTTGGAGTTCTaGTGGATGTTCAGGTCACCCAGGCCTATGGTGAGC +
Preference number: 3 (lower is better)
Translates to: SRNRKRMGYLEF*WMFRSPRPMVS
Trigger: GCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTATCCCATTCTCTTTCTGTTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR CCA 72 bp TTACATGAATCCTTTCACCAGATAACGGCGGCAGAGTaGATTTTCTGGTGGTTTCGGCCCCAGTCACCTGGA +
Preference number: 3 (lower is better)
Translates to: LHESFHQITAAE*IFWWFRPQSPG
Trigger: TCCAGGTGACTGGGGCCGAAACCACCAGAAAATCCACTCTGCCGCCGTTATCTGGTGAAAGGATTCATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp TTCACCTCATTGATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACTCCCACTCAGACAAATaGACAACTGCCCCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: FTSLIRKHSRKSSSATLHSHSDK*TTAPQF
Trigger: GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGA...GTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CAA 90 bp AGCCTCCACAGCTCTGATATGACCTTCCTGCATGACTTTGCCCAAGTACACATTTTGGCTGAAAGCCTTTaGGGGTGGACACTGTTGGGA +
Preference number: 3 (lower is better)
Translates to: SLHSSDMTFLHDFAQVHILAESL*GWTLLG
Trigger: TCCCAACAGTGTCCACCCCAAAAGGCTTTCAGCCAA...AATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp AAGAGAATGGGATACTTGGAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGTTGGCAACTGTGGGGTaGGGTTCAAACCCTTCTATC +
Preference number: 3 (lower is better)
Translates to: KRMGYLEFCWMFRSPRPMLATVG*GSNPSI
Trigger: GATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAA...CATAGGCCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp GGCGAGGTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGTGTTGGTACTTGGGGTaGAAGAAGGCCCCCTTGGCG +
Preference number: 3 (lower is better)
Translates to: GEVLFVGKQVQEDRQYHKCWYLG*KKAPLA
Trigger: CGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACA...CTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTACCTCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571139.5
3UTR TCA 72 bp TTAGCTAAAGGAGCATTTGCAGCCAAAGGCACTATCTaGACCTGGGAGACCCCATCCCTGGAAAACACCTTC +
Preference number: 3 (lower is better)
Translates to: LAKGAFAAKGTI*TWETPSLENTF
Trigger: GAAGGTGTTTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCTTTAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp CCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCTTAATGCGGGTAGCTTCCCACTCAGACAAATaGACAACTGCCCCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: PNHFLSDQDVCSGLMRVASHSDK*TTAPQF
Trigger: GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGA...AGCTACCCGCATTAAGCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp CTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGGTCCTGGCTTCCCACTCAGACAAATaGACAACTGCCCCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: LLLSHSGNIFSNSKMVLASHSDK*TTAPQF
Trigger: GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGA...AGCCAGGACCATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CAA 90 bp AAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCACTTCTTCAAATGCATaGAGAGTGGTTTTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: KSSSATLHSSPIRNLLLSTSSNA*RVVLLL
Trigger: CAACAGCAAAACCACTCTCAATGCATTTGAAGAAGT...GCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CAA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAACTTCTTCAAATGCATaGAGAGTGGTTTTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGTSSNA*RVVLLL
Trigger: CAACAGCAAAACCACTCTCAATGCATTTGAAGAAGT...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CAA 90 bp CTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCGTTCCTGGAAGAATCTaGGATTTTGTTGAAATCTGC +
Preference number: 3 (lower is better)
Translates to: LTGPGSSLRKETCVFHSVVPGRI*DFVEIC
Trigger: GCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC...GACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CAA 90 bp TGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCAGTTCCTGGAAGAATCTaGGATTTTGTTGAAATCTGC +
Preference number: 3 (lower is better)
Translates to: CSSYRPRVFVKEGDVRLPVPGRI*DFVEIC
Trigger: GCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC...TGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR-3UTR CAA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTCTCCTCTGCTCTTCCTaGGCCAGCTGTGCACTGGGG +
Preference number: 3 (lower is better)
Translates to: FAVVPGRILDFVEICCSSLLCSS*ASCALG
Trigger: CCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGAG...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAGTAGAAGCCTTCGTGTaGGTACTTGGGGTTGAAGAA +
Preference number: 3 (lower is better)
Translates to: LLSLGHFSISEAKATPNPVEAFV*VLGVEE
Trigger: TTCTTCAACCCCAAGTACCAACACGAAGGCTTCTAC...TGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGAAGTCATTCTGCGTCTaGAAGTCCTCGGCCACGGTC +
Preference number: 3 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMKSFCV*KSSATV
Trigger: GACCGTGGCCGAGGACTTCAAGACGCAGAATGACTT...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp GCTAGGCCCCGACTCTTCAGTTTGCCTCAAGCCAGATaGACTTATCTATCGCCATGTTATCTGAAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: ARPRLFSLPQAR*TYLSPCYLKAK
Trigger: TTTGGCCTTCAGATAACATGGCGATAGATAAGTTCATCTGGCTTGAGGCAAACTGAAGAGTCGGGGCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 72 bp AGACCCACAGACAGCAGATCACCAAAACATGTGAGATaGCAAACATCCCTATGGCTCTCCATTCCCCACTTG +
Preference number: 3 (lower is better)
Translates to: RPTDSRSPKHVR*QTSLWLSIPHL
Trigger: CAAGTGGGGAATGGAGAGCCATAGGGATGTTTGTCATCTCACATGTTTTGGTGATCTGCTGTCTGTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 72 bp AAGAATCAGGACACTCCAGCCTCCACAGCTCTGATATaGCCTTCCTGCATGACTTTGCCCAAGTACACATTC +
Preference number: 3 (lower is better)
Translates to: KNQDTPASTALI*PSCMTLPKYTF
Trigger: GAATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGAGGCTGGAGTGTCCTGATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR GCA 72 bp CAGACTGCTGCTGGCTGTAGGTTTACACCAGCTGTTTaGCAAGTAACAAAATCCAGGATGTTTCCCACTCAG +
Preference number: 3 (lower is better)
Translates to: QTAAGCRFTPAV*QVTKSRMFPTQ
Trigger: CTGAGTGGGAAACATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGCAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR CCA 72 bp CTAAAAACATCTCTCAGCTTGAGACAGTTTGAACCTTaGGGTGTCAGGGGACGTTCACTCCAAGGATGGTCT +
Preference number: 3 (lower is better)
Translates to: LKTSLSLRQFEP*GVRGRSLQGWS
Trigger: AGACCATCCTTGGAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR-3UTR CAA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCAAAAACATCTCTCAGCTaGAGACAGTTTGAACCTTGG +
Preference number: 3 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSKTSLS*RQFEPW
Trigger: CCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTT...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
3UTR-3UTR CAA 90 bp GTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 3 (lower is better)
Translates to: VPGRILDFVEICCSSYRPELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp GCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACACAGGAGGAGAGGTCTaGGCAACTGTGGGGTTGGGT +
Preference number: 3 (lower is better)
Translates to: AVVPGRILDFVEICCSSYTGGEV*ATVGLG
Trigger: ACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGT...GTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTGTGAGGCCATCGTTGTaGCGAGTGGTCTCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: FAVVPGRILDFVEICCSSVRPSL*RVVSSS
Trigger: GGAGCTGGAGACCACTCGCAACAACGATGGCCTCAC...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp ATGCGACTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTTCCCACTCAGACAAATaGACAACTGCCCCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: MRLTAEFQDDIDRAAAISSHSDK*TTAPQF
Trigger: GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGA...AGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAGTCGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGCAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 3 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp CGCAGTAGGATCATGTCGTACATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGGCATTGAGAGTGGTTTaGCTGTTGTTCCTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: RSRIMSYMRFTKSFCVLKALRVV*LLFLEE
Trigger: TTCTTCCAGGAACAACAGCAAAACCACTCTCAATGC...CTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACATGATCCTACTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR-3UTR CAA 90 bp ATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCGAAGAATCTTGGATTTaGTTGAAATCTGCTGTTCGT +
Preference number: 3 (lower is better)
Translates to: IRKHSRKSSSATLHSSPIEESWI*LKSAVR
Trigger: ACGAACAGCAGATTTCAACAAAATCCAAGATTCTTC...GATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR TCA 72 bp GGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATaGATCCAAACCACTTCCTTTCAGACCAAGATGTCT +
Preference number: 3 (lower is better)
Translates to: GIPSSIVWSLAS*IQTTSFQTKMS
Trigger: AGACATCTTGGTCTGAAAGGAAGTGGTTTGGATTCATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CCA 72 bp GAAGTGCTCCTTTTCACTCTGATGCTTCTTGACTTATaGCTTCCCTTGGTAAACCTACCTAGGCTCAGACGT +
Preference number: 3 (lower is better)
Translates to: EVLLFTLMLLDL*LPLVNLPRLRR
Trigger: ACGTCTGAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTCAAGAAGCATCAGAGTGAAAAGGAGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CCA 72 bp AAGAAGCATTTCCATTCAACCCTCCCATTTGACAGATaGGGAAAGTCAGGACCCTTAGACTTGATCTGCCCA +
Preference number: 3 (lower is better)
Translates to: KKHFHSTLPFDR*GKSGPLDLICP
Trigger: TGGGCAGATCAAGTCTAAGGGTCCTGACTTTCCCCATCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
3UTR-3UTR CAA 90 bp AGCCTCCACAGCTCTGATATGACCTTCCTGCATGACTTTGCCCAAGTACACATTAAAACATCTCTCAGCTaGAGACAGTTTGAACCTTGG +
Preference number: 3 (lower is better)
Translates to: SLHSSDMTFLHDFAQVHIKTSLS*RQFEPW
Trigger: CCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTT...AATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCGTTCCTGGAAGAATCTaGGATTTTGTTGAAATCTGT +
Preference number: 3 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLVPGRI*DFVEIC
Trigger: ACAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR-3UTR CAA 90 bp CGCAGTAGGATCATGTCGTACATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGACTATCTCCTTGGTGTaGGGGTTGATGTTTAACAAG +
Preference number: 3 (lower is better)
Translates to: RSRIMSYMRFTKSFCVLKTISLV*GLMFNK
Trigger: CTTGTTAAACATCAACCCCAACACCAAGGAGATAGT...CTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACATGATCCTACTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR GCA 72 bp TCAACAACATTCCTCATTAAGTGCGCAACCAGCTTCTaGTTAAACATCTCCAACATCTGGAGCAGTTGCTGG +
Preference number: 3 (lower is better)
Translates to: STTFLIKCATSF*LNISNIWSSCW
Trigger: CCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCAGAAGCTGGTTGCGCACTTAATGAGGAATGTTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CCA 72 bp TGCGCAACCAGCTTCTGCTTAAACATCTCCAACATCTaGAGCAGTTGCTGGATTCTGTTGAGCCAAAATCTT +
Preference number: 3 (lower is better)
Translates to: CATSFCLNISNI*SSCWILLSQNL
Trigger: AAGATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCAGAAGCTGGTTGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACAGAAGAATCTTGGATTTaGTTGAAATCTGCTGTTCGT +
Preference number: 3 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTEESWI*LKSAVR
Trigger: ACGAACAGCAGATTTCAACAAAATCCAAGATTCTTC...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR TCA 72 bp TTTACAAGGATCCGGCACATTCAAGGGAGAATGGGGTaGCGATTCTGTGTTTGGAACCAAGATCACAGTAAA +
Preference number: 3 (lower is better)
Translates to: FTRIRHIQGRMG*RFCVWNQDHSK
Trigger: TTTACTGTGATCTTGGTTCCAAACACAGAATCGTCACCCCATTCTCCCTTGAATGTGCCGGATCCTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CCA 72 bp TCCCTATGGCTCTCCATTCCCCACTTGGACAAAAGCTaGCAGGTTAGGCAAATAGAAATCAATAATTGGCTT +
Preference number: 3 (lower is better)
Translates to: SLWLSIPHLDKS*QVRQIEINNWL
Trigger: AAGCCAATTATTGATTTCTATTTGCCTAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAGCCATAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR-3UTR CAA 90 bp CTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTGAAGAATCTTGGATTTaGTTGAAATCTGCTGTTCGT +
Preference number: 3 (lower is better)
Translates to: LHRGFREFLDFFKCIESGEESWI*LKSAVR
Trigger: ACGAACAGCAGATTTCAACAAAATCCAAGATTCTTC...ACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR TCA 72 bp ACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTaGGCCAAAATCTTTCTCAATTTCCTAATTCTGCCC +
Preference number: 3 (lower is better)
Translates to: TSPTSGAVAGFC*AKIFLNFLILP
Trigger: GGGCAGAATTAGGAAATTGAGAAAGATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 72 bp ATCTCCAGGCTAAAAGGGACCTTAAACTTCTTCCAATaGCCATTTTCAACAACATTCCTCATTAAGTGCGCA +
Preference number: 3 (lower is better)
Translates to: ISRLKGTLNFFQ*PFSTTFLIKCA
Trigger: TGCGCACTTAATGAGGAATGTTGTTGAAAATGGTCATTGGAAGAAGTTTAAGGTCCCTTTTAGCCTGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR GCA 72 bp AGCTTCTGCTTAAACATCTCCAACATCTGGAGCAGTTaGTGGATTCTGTTGAGCCAAAATCTTTCTCAATTT +
Preference number: 3 (lower is better)
Translates to: SFCLNISNIWSS*WILLSQNLSQF
Trigger: AAATTGAGAAAGATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCAGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR TCA 72 bp TACTATTTTTATAATTCCACCTCGAACATTTTTACATaGATCCTTTCACCAGATAACGGCGGCAGAGTGGAT +
Preference number: 3 (lower is better)
Translates to: YYFYNSTSNIFT*ILSPDNGGRVD
Trigger: ATCCACTCTGCCGCCGTTATCTGGTGAAAGGATTCATGTAAAAATGTTCGAGGTGGAATTATAAAAATAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCCGGCGCCGGCGGCGATaGGCAGGGCTGCGATGTCCC +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLRRRRR*AGLRCP
Trigger: GGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCG...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTCCAAGGGGTGCGGGATaGCCTCCTCCTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: DSACSARQRTRTPALGSAPRGAG*PPPPGG
Trigger: GCCCCCGGGAGGAGGAGGCCATCCCGCACCCCTTGG...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGCGGCGCCGGCGGCGATaGGCAGGGCTGCGATGTCCC +
Preference number: 4 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMRRRRR*AGLRCP
Trigger: GGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCG...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCCCTTGGCGTGCGCGTTaGCGTCGGCGCCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: GKEPGPFTQIAAAQQDLPPWRAR*RRRRRR
Trigger: TCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGG...GGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCGGCGATGAGCAGGGCTaGGATGTCCCCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLGDEQG*DVPLPP
Trigger: CGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTAAGGCCCCCTTGGCGTaGGCGTTGACGTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: HRVGDSACSARQRTRTPAKAPLA*ALTSAP
Trigger: CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTT...AGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGCCGCCTTGCCCATCTTaGCGGCCAGCTGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQPPCPS*RPAAAA
Trigger: CGCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGG...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGCGGCGCCGGCGGCGATaGGCAGGGCTGCGATGTCCC +
Preference number: 4 (lower is better)
Translates to: ASRAGLHHPSKPLCTESVRRRRR*AGLRCP
Trigger: GGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCG...CACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTCCAGCTGCAGCGGCGTaGGGCCATCGTTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: DSACSARQRTRTPALGSAPAAAA*GHRCCE
Trigger: CTCGCAACAACGATGGCCTCACGCCGCTGCAGCTGG...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 4 (lower is better)
Translates to: HRVGDSACSARQRTRTPAVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...AGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp TGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGACGTCGGCGCCGCCGCCTTGCCCATCTTaGCGGCCAGCTGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: WYLGLKKAPLACALTSAPPPCPS*RPAAAA
Trigger: CGCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGG...CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CAA 72 bp TACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTaGACGTCGGCGCCGGCGGCGATGAGCAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: YLGLKKAPLACA*TSAPAAMSRAA
Trigger: CGCAGCCCTGCTCATCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACCAGCTGCAGCGGCGTaGGGCCATCGTTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARAPAAAA*GHRCCE
Trigger: CTCGCAACAACGATGGCCTCACGCCGCTGCAGCTGG...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GTGCGCGTTGACGTCGGCGCCGGCGGCGATGAGCAGGGCTGCGATGTCCCCCTGTCCGAGAGGATGGACTaGAGATCCGAGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: VRVDVGAGGDEQGCDVPLSERMD*RSEGLS
Trigger: GCTGAGACCCTCGGATCTGCAGTCCATCCTCTCGGA...CAGGGGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCGACGTCAACGCGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACCTGCCGCCGCTCGATaGCGATGTTCAGCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARAPAAAR*RCSAPS
Trigger: AGACGGCGCTGAACATCGCCATCGAGCGGCGGCAGG...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCACCTTGGCGTGCGCGTTaGCGTCGGCGCCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSPWRAR*RRRRRR
Trigger: TCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGG...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAGCTGCGATGTCCCCCTaGCGCCGCTCGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVAAMSP*RRSMAM
Trigger: CATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGC...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACGCTGCGATGTCCCCCTaGCGCCGCTCGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHAAMSP*RRSMAM
Trigger: CATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGC...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATGGCGATGAGCAGGGCTaGGATGTCCCCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDGDEQG*DVPLPP
Trigger: CGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGAAGGCCCCCTTGGCGTaGGCGTTGACGTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: ASRAGLHHPSKPLCTESVKAPLA*ALTSAP
Trigger: CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTT...CACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGCCCCGGGTGGGACTGTaGCTGAGGCGGCGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRPRVGL*LRRREA
Trigger: AGCTTCCCGCCGCCTCAGCCACAGTCCCACCCGGGG...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTGGCACATCCTCATCATaGCGCCGCCTGCAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: DSACSARQRTRTPALGSAGTSSS*RRLQSS
Trigger: GGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCC...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCCGCCTTGCCCATCTTaGCGGCCAGCTGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDPPCPS*RPAAAA
Trigger: CGCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGG...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GCCCCTCAGTTCAGACACCCACTGAGCACTGAGCACGAGGGTGCACTCTGCTTCCCAAGGGGTGCGGGATaGCCTCCTCCTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: APQFRHPLSTEHEGALCFPRGAG*PPPPGG
Trigger: GCCCCCGGGAGGAGGAGGCCATCCCGCACCCCTTGG...GAAGCAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACTGAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCGACGGCCCATCTACCTaGGCCCTGCCCAGAGCGAAA +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLDGPST*ALPRAK
Trigger: TTTCGCTCTGGGCAGGGCCCAGGTAGATGGGCCGTC...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CAA 72 bp CCTTCGTGTTGGTACTTGGGGTTGAAGAAGGCCCCCTaGGCGTGCGCGTTGACGTCGGCGCCGGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: PSCWYLGLKKAP*ACALTSAPAAM
Trigger: CATCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CAA 72 bp TTGGCGGCCAGCTGCAGCGGCGTGAGGCCATCGTTGTaGCGAGTGGTCTCCAGCTCCCAGTTGCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: LAASCSGVRPSL*RVVSSSQLPLR
Trigger: GCGGAGTGGCAACTGGGAGCTGGAGACCACTCGCAACAACGATGGCCTCACGCCGCTGCAGCTGGCCGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAGGGTGGGACTGTGGCTaGGGCGGCGGGAAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQGWDCG*GGGKLS
Trigger: TGAGAGCTTCCCGCCGCCTCAGCCACAGTCCCACCC...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR TCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGCGGCGCCGGCGGCGATaGGCAGGGCTGCGATGTCCC +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGRRRRR*AGLRCP
Trigger: GGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCG...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGCCTTGGCGTGCGCGTTaGCGTCGGCGCCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGPWRAR*RRRRRR
Trigger: TCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGG...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTACCAGCACTGCGTCGCTaGAGCTGCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVPALRR*SCRRSC
Trigger: GCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGG...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTGCGGGAAGCTCTCATTaGAGGCAGAGGGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRVGDSACSARQRTRTPAAGSSH*RQRDGW
Trigger: CCAGCCATCCCTCTGCCTGCAATGAGAGCTTCCCGC...AGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR GCA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTCGCCTGCAAAGCTCCTaGAGCTCCACCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: DSACSARQRTRTPALGSARLQSS*SSTSNS
Trigger: AGAGTTGCTGGTGGAGCTGCAGGAGCTTTGCAGGCG...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCGGGATGGCCTCCATCATGGCGCCGCCTaGAAAGCTCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ELQPPHLVRQGQGVRDGLHHGAA*KAPAAP
Trigger: TGGAGCTGCAGGAGCTTTGCAGGCGGCGCCATGATG...GAGGCCATCCCGCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTACTGGTTGGTGCATGCTaGCAGGGCCAGGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVLVGAC*QGQGRL
Trigger: GAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAG...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCATATGCAGCAGCGTGTaGAGCGGCTCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLICSSV*SGSRVS
Trigger: GCTGACCCTGGAGCCGCTGCACACGCTGCTGCATAT...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp GCCCCTCAGTTCAGACACCCACTGAGCACTGAGCACGAGGGTGCACTCTGCTTCCCGCCTTGCCCATCTTaGCGGCCAGCTGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: APQFRHPLSTEHEGALCFPPCPS*RPAAAA
Trigger: CGCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGG...GAAGCAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACTGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAACCGCCTTGCCCATCTTaGCGGCCAGCTGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: SLPPSPAHSGMGSRVSHKPPCPS*RPAAAA
Trigger: CGCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGG...TTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGCCAAGGGGTGCGGGATaGCCTCCTCCTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILPRGAG*PPPPGG
Trigger: GCCCCCGGGAGGAGGAGGCCATCCCGCACCCCTTGG...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTAGGCATCCGAGAGGATaGACTGCAGATCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: DSACSARQRTRTPALGSARHPRG*TADPRV
Trigger: GACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCT...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCCGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGA +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLRAHQL*VPLLHR
Trigger: TCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCG...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR CAA 72 bp TCGTGCTCCATCAGCAGCTGCACAATCTCGGGCTGGTaGGTGCATGCTGCCAGGGCCAGGGGCGTCTCACCG +
Preference number: 4 (lower is better)
Translates to: SCSISSCTISGW*VHAARARGVSP
Trigger: CGGTGAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTCCGTCAGCTTGTGCATaGGGAAGTCAGGCACATCCT +
Preference number: 4 (lower is better)
Translates to: DSACSARQRTRTPALGSAPSACA*GSQAHP
Trigger: AGGATGTGCCTGACTTCCTCATGCACAAGCTGACGG...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCCTTGGCGTGCGCGTTaGCGTCGGCGCCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: LTGPGSSLRKETCVFHSVPWRAR*RRRRRR
Trigger: TCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGG...GACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCCCTTGGCGTGCGCGTTaGCGTCGGCGCCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: SISPSQADLQLVKPEASPPWRAR*RRRRRR
Trigger: TCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGG...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCCCAGCTGCAGCGGCGTaGGGCCATCGTTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: LPQDIQLTSVPRTLWDGIPAAAA*GHRCCE
Trigger: CTCGCAACAACGATGGCCTCACGCCGCTGCAGCTGG...GATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: QTAHAHTSSGFRFYTEVSSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...GGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp GCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGGCTTACAGGCCCGGATaGCGGCCCATCTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASRAGLHHPSKPLCTESVAYRPG*RPIYLG
Trigger: GCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGC...CACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTGAGGCCGTCAGCTTGTaGATGAGGAAGTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: DSACSARQRTRTPALGSAEAVSL*MRKSGT
Trigger: TGTGCCTGACTTCCTCATGCACAAGCTGACGGCCTC...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCGAGGTGATGTCCGTCTaGTCGTGCTCCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLEVMSV*SCSISS
Trigger: GCTGCTGATGGAGCACGAGCAGACGGACATCACCTC...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTCCAGCTCCCAGTTaGCACTCCGCAGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: DSACSARQRTRTPALGSASPAPS*HSAVGS
Trigger: TGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGA...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCAATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARAILPRS*SHPILC
Trigger: GCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGTCTGCAGGCGCCAGATaGGTTCGCTCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQSAGAR*VRSPWR
Trigger: TCTCCAAGGAGAGCGAACGCATCTGGCGCCTGCAGA...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCCCTGCCGCCGCTCGATaGCGATGTTCAGCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: QTAHAHTSSGFRFYTEVSPAAAR*RCSAPS
Trigger: AGACGGCGCTGAACATCGCCATCGAGCGGCGGCAGG...GGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp GGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCCGCCTTGCCCATCTTaGCGGCCAGCTGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: GKTPLPAPQDCCPFPAIHPPCPS*RPAAAA
Trigger: CGCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGG...ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGCCAAGGGGTGCGGGATaGCCTCCTCCTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRPRGAG*PPPPGG
Trigger: GCCCCCGGGAGGAGGAGGCCATCCCGCACCCCTTGG...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CCCAATCGGCCCCATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCACCAAGGGGTGCGGGATaGCCTCCTCCTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PNRPHQGHKVSICPASLAPRGAG*PPPPGG
Trigger: GCCCCCGGGAGGAGGAGGCCATCCCGCACCCCTTGG...TGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGATGGGGCCGATTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACGACGGCCCATCTACCTaGGCCCTGCCCAGAGCGAAA +
Preference number: 4 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHDGPST*ALPRAK
Trigger: TTTCGCTCTGGGCAGGGCCCAGGTAGATGGGCCGTC...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CAA 72 bp ACAAACATCCTCCCTAGGAGCTGCAGCCACCCCATCTaGTGCGTCAGGGCCAAGGGGTGCGGGATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TNILPRSCSHPI*CVRAKGCGMAS
Trigger: GGAGGCCATCCCGCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGATGTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGTGGCAACCCTTGCCCTaGGATCACCGCATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMWQPLP*DHRMSG
Trigger: CCCAGACATGCGGTGATCTCAGGGCAAGGGTTGCCA...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR TCA 90 bp AAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGGGCTTTCATGGCTGGTaGGGTTCTGGGTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: KRARTFHPDRGGPAGLARGFHGW*GSGWSW
Trigger: CCACGACCACCCAGAACCTCACCAGCCATGAAAGCC...CCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576742.6
CDS-3UTR TCA 90 bp TGCAGTCCTTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCGGCGCCGGCGGCGATaGGCAGGGCTGCGATGTCCC +
Preference number: 4 (lower is better)
Translates to: CSPCCLWDTSRSARPRLLRRRRR*AGLRCP
Trigger: GGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCG...GAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GTACTCGGCGTTGATGAACCTGCCCAGGATGTCGTTCTCTTCAGCAAAGGCAAGCGGCGCCGGCGGCGATaGGCAGGGCTGCGATGTCCC +
Preference number: 4 (lower is better)
Translates to: VLGVDEPAQDVVLFSKGKRRRRR*AGLRCP
Trigger: GGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCG...CTTGCCTTTGCTGAAGAGAACGACATCCTGGGCAGGTTCATCAACGCCGAGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCGTGAGTCCCGCGAGGTaGTGTCCGTCTGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPVSPAR*CPSARA
Trigger: AGCACGAGCAGACGGACATCACCTCGCGGGACTCAC...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACAGATGTTGTTGCCTCGTaGGTCCCGCGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: ACSARQRTRTPALGSASTDVVAS*VPRGDV
Trigger: GACATCACCTCGCGGGACTCACGAGGCAACAACATC...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCGTCGTAGAGGGAGGATaGCACGGGTCCGTACGCCCA +
Preference number: 4 (lower is better)
Translates to: LPQDIQLTSVPRTLWDGIVVEGG*HGSVRP
Trigger: TGGGCGTACGGACCCGTGTCATCCTCCCTCTACGAC...GATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCAGCACTGCGTCGCTaGAGCTGCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSPALRR*SCRRSC
Trigger: GCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGG...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp CACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCAGCTTGAGACAGTTTaGACCTTGGGGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: HRVGDSACSARQRTRTPAQLETV*TLGCQG
Trigger: CCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTG...AGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp GGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGCTGCTGTGGATTGTaGAGCCTCACACACCCCAGC +
Preference number: 4 (lower is better)
Translates to: GKEPGPFTQIAAAQQDLPGCCGL*SLTHPS
Trigger: GCTGGGGTGTGTGAGGCTTCACAATCCACAGCAGCC...GGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGGCTTACAGGCCCGGATaGCGGCCCATCTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQAYRPG*RPIYLG
Trigger: GCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGC...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTACACGGCTGCAAAGATaGGCTTCTTCAGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: HRVGDSACSARQRTRTPATRLQR*ASSAAS
Trigger: AGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGT...AGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCCATCATGGCGCCGCCTaGAAAGCTCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ILPRSCSHPILCVRAKGCHHGAA*KAPAAP
Trigger: TGGAGCTGCAGGAGCTTTGCAGGCGGCGCCATGATG...GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCGGCGATGAGCAGGGCTaGGATGTCCCCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GPGSSLRKETCVFHSVHFGDEQG*DVPLPP
Trigger: CGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC...GAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp AGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTGCGTCGCTGAAGAAGGCCCCCTTGGCGTaGGCGTTGACGTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RSPRPMVSLKSSSTASLKKAPLA*ALTSAP
Trigger: CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTT...CTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp TCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTAAGGCCCCCTTGGCGTaGGCGTTGACGTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SSATLHSSPIRNLLLSHSKAPLA*ALTSAP
Trigger: CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTT...AGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACCTGGTTGGTGCATGCTaGCAGGGCCAGGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHLVGAC*QGQGRL
Trigger: GAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAG...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACAGAGGTGATGTCCGTCTaGTCGTGCTCCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ACSARQRTRTPALGSASTEVMSV*SCSISS
Trigger: GCTGCTGATGGAGCACGAGCAGACGGACATCACCTC...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp TGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGACGTCGGCGCCGTCTGCAGGCGCCAGATaGGTTCGCTCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: WYLGLKKAPLACALTSAPSAGAR*VRSPWR
Trigger: TCTCCAAGGAGAGCGAACGCATCTGGCGCCTGCAGA...CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACAGCTCCTCAAGACTGCTaGCCCTTTCCCGCCATCCAT +
Preference number: 4 (lower is better)
Translates to: ACSARQRTRTPALGSASTAPQDC*PFPAIH
Trigger: ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGC...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR GCA 90 bp CTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCCGGCCCAGCAGGACTTaGCCGGAGTGTCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: LPQDIQLTSVPRTLWDGIRPSRT*PECLMQ
Trigger: CTGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCG...GATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGCGGCCCAGCAGGACTTaGCCGGAGTGTCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: ASRAGLHHPSKPLCTESVRPSRT*PECLMQ
Trigger: CTGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCG...CACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATTTCTCCAGAGGCCCATaGCCAGCCCCGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDFSRGP*PAPTTV
Trigger: CACAGTGGTCGGGGCTGGGCATGGGCCTCTGGAGAA...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGACGTCGGCGCCGTGGGGTGGGCTTTCATaGCTGGTGAGGTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: WYLGLKKAPLACALTSAPWGGLS*LVRFWV
Trigger: CACCCAGAACCTCACCAGCCATGAAAGCCCACCCCA...CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACCGCCGGCCTCTTCTCTaGCAGGATGGCAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHRRPLL*QDGRVP
Trigger: GGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCG...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCGCCGGCCTCTTCTCTaGCAGGATGGCAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSRRPLL*QDGRVP
Trigger: GGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCG...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGCAGGAGGAGAGGTCTTaGCAACTGTGGGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQQEERS*QLWGWV
Trigger: AACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTG...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTACGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGA +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVRAHQL*VPLLHR
Trigger: TCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCG...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAACACGCGATTACTCCCTaGGTCAGCTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQHAITP*VSWEGR
Trigger: CCTGCCCTCCCAGCTGACCCAGGGAGTAATCGCGTG...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGGTAATCCCAGCCCTCTaGGAGGTCAAAGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQVIPAL*EVKVGR
Trigger: TCTGCCCACTTTGACCTCCCAGAGGGCTGGGATTAC...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp ACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGTGAGTCCCGCGAGGTaGTGTCCGTCTGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: TRKRARTFHPDRGGPAGLVSPAR*CPSARA
Trigger: AGCACGAGCAGACGGACATCACCTCGCGGGACTCAC...AAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGTGAGTCCCGCGAGGTaGTGTCCGTCTGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: LGQQSRTPPSLKASLHRVVSPAR*CPSARA
Trigger: AGCACGAGCAGACGGACATCACCTCGCGGGACTCAC...GACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACGATGTTGTTGCCTCGTaGGTCCCGCGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHDVVAS*VPRGDV
Trigger: GACATCACCTCGCGGGACTCACGAGGCAACAACATC...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCACGGTCACCAGGGCGTaGAGGATGTTGTTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: ILPRSCSHPILCVRAKGCTVTRA*RMLLPR
Trigger: ACGAGGCAACAACATCCTTCACGCCCTGGTGACCGT...GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTCCAGCTGCAGCGGCGTaGGGCCATCGTTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISPAAAA*GHRCCE
Trigger: CTCGCAACAACGATGGCCTCACGCCGCTGCAGCTGG...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTGCCCAGAGGCCAAAGGCACTATCTaGACCTGGGAGACCCCATCC +
Preference number: 4 (lower is better)
Translates to: KYGLQARMTAHLPGPCPEAKGTI*TWETPS
Trigger: GGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGC...CTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GCAGAGAAACTGGCCCAGAGTGCACTGCTAGGCCCCGACTCTTCAGTTTGCCTCGCTTACAGGCCCGGATaGCGGCCCATCTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: AEKLAQSALLGPDSSVCLAYRPG*RPIYLG
Trigger: GCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGC...GAGGCAAACTGAAGAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTGCCCAGAGCGCCTGCAAAGCTCCTaGAGCTCCACCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: KYGLQARMTAHLPGPCPERLQSS*SSTSNS
Trigger: AGAGTTGCTGGTGGAGCTGCAGGAGCTTTGCAGGCG...CTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAACATCATGGCGCCGCCTaGAAAGCTCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQHHGAA*KAPAAP
Trigger: TGGAGCTGCAGGAGCTTTGCAGGCGGCGCCATGATG...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGGCTGCGATGTCCCCCTaGCGCCGCTCGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGAAMSP*RRSMAM
Trigger: CATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGC...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCATCTCGGGCTGGTTGGTaGATGCTGCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSSRAGW*MLPGPG
Trigger: CCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGA...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTTCTCGGGCTGGTTGGTaGATGCTGCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISSRAGW*MLPGPG
Trigger: CCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGA...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTCAGGATCTCCGCCTTaGCCATCTTGGCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRSGSPP*PSWRPA
Trigger: AGCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGA...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCAAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARASCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCGGGATGGCCTCAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: ELQPPHLVRQGQGVRDGLSCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...GAGGCCATCCCGCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTGCCCAGAGTCTGCAGGCGCCAGATaGGTTCGCTCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KYGLQARMTAHLPGPCPESAGAR*VRSPWR
Trigger: TCTCCAAGGAGAGCGAACGCATCTGGCGCCTGCAGA...CTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGCATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTGCCCAGAGCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 4 (lower is better)
Translates to: KYGLQARMTAHLPGPCPEPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...CTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGCTCCTCAAGACTGCTaGCCCTTTCCCGCCATCCAT +
Preference number: 4 (lower is better)
Translates to: GKEPGPFTQIAAAQQDLPAPQDC*PFPAIH
Trigger: ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGC...GGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTATGGGGTGGGCTTTCATaGCTGGTGAGGTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVWGGLS*LVRFWV
Trigger: CACCCAGAACCTCACCAGCCATGAAAGCCCACCCCA...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp ATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCTGGGGTGGGCTTTCATaGCTGGTGAGGTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ILPRSCSHPILCVRAKGCWGGLS*LVRFWV
Trigger: CACCCAGAACCTCACCAGCCATGAAAGCCCACCCCA...GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGGCAGGGTTCCCACTaGGGGCAGCAACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRWQGSH*GQQLSC
Trigger: GCAAGAGAGTTGCTGCCCCCAGTGGGAACCCTGCCA...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp GGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCCTGCCGCCGCTCGATaGCGATGTTCAGCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GKTPLPAPQDCCPFPAIHPAAAR*RCSAPS
Trigger: AGACGGCGCTGAACATCGCCATCGAGCGGCGGCAGG...ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTCCTGCCGCCGCTCGATaGCGATGTTCAGCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPAPAAAR*RCSAPS
Trigger: AGACGGCGCTGAACATCGCCATCGAGCGGCGGCAGG...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGAGGCATCCGAGAGGATaGACTGCAGATCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMRHPRG*TADPRV
Trigger: GACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCT...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAAGGCATCCGAGAGGATaGACTGCAGATCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVRHPRG*TADPRV
Trigger: GACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCT...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCATCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARASQTPR*SWLSAG
Trigger: GCCTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLSQTPR*SWLSAG
Trigger: GCCTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCAGAGTGGATTTTCTGGTaGTTTCGGCCCCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARAEWIFW*FRPQSP
Trigger: AGGTGACTGGGGCCGAAACCACCAGAAAATCCACTC...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTATCTGTCCAGCTAGTCTaGCACACAGAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVSVQLV*HTEWPR
Trigger: CCTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGA...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAACACGCGATTACTCCCTaGGTCAGCTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLPPSPAHSGMGSRVSHKHAITP*VSWEGR
Trigger: CCTGCCCTCCCAGCTGACCCAGGGAGTAATCGCGTG...TTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCCCGTCAGCTTGTGCATaGGGAAGTCAGGCACATCCT +
Preference number: 4 (lower is better)
Translates to: ILPRSCSHPILCVRAKGCPSACA*GSQAHP
Trigger: AGGATGTGCCTGACTTCCTCATGCACAAGCTGACGG...GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp AAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGCCGTCAGCTTGTGCATaGGGAAGTCAGGCACATCCT +
Preference number: 4 (lower is better)
Translates to: KRARTFHPDRGGPAGLARPSACA*GSQAHP
Trigger: AGGATGTGCCTGACTTCCTCATGCACAAGCTGACGG...CCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCGTTGGTACTTGGGGTTaGAGAAGGCCCCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPVGTWG*RRPPWR
Trigger: ACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAAC...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGGATGTTGTTGCCTCGTaGGTCCCGCGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: ASRAGLHHPSKPLCTESVDVVAS*VPRGDV
Trigger: GACATCACCTCGCGGGACTCACGAGGCAACAACATC...CACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCCCAGCTGCAGCGGCGTaGGGCCATCGTTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: GPGSSLRKETCVFHSVHFPAAAA*GHRCCE
Trigger: CTCGCAACAACGATGGCCTCACGCCGCTGCAGCTGG...GAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTGTCGTAGAGGGAGGATaGCACGGGTCCGTACGCCCA +
Preference number: 4 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPAVVEGG*HGSVRP
Trigger: TGGGCGTACGGACCCGTGTCATCCTCCCTCTACGAC...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATGGTGTCCACGTTGGTaGGGTCGTAGAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: SSPRISSLPPSPAHSGMGWCPRW*GRRGRM
Trigger: CATCCTCCCTCTACGACCTCACCAACGTGGACACCA...TCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGACACCCACTGAGCACTaGGCACGAGGGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQTPTEH*ARGCTL
Trigger: CAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGT...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp CACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCCCACTGAGACATACTaGGGTATGCGACTAACTGCT +
Preference number: 4 (lower is better)
Translates to: HRVGDSACSARQRTRTPAPTETY*GMRLTA
Trigger: AGCAGTTAGTCGCATACCTCAGTATGTCTCAGTGGG...AGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAGCCAAAGGCACTATCTaGACCTGGGAGACCCCATCC +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQAKGTI*TWETPS
Trigger: GGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGC...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGGAGGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCAGCGGGAAGCTCTCATTaGAGGCAGAGGGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: QEERLLSLLLKTAAPFPPAGSSH*RQRDGW
Trigger: CCAGCCATCCCTCTGCCTGCAATGAGAGCTTCCCGC...TGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR GCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGACACGGCTGCAAAGATaGGCTTCTTCAGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMTRLQR*ASSAAS
Trigger: AGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGT...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp AGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAGGTTTACACCAGCTGTTTCTGGTTGGTGCATGCTaGCAGGGCCAGGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RRLPGSRLLLAVGLHQLFLVGAC*QGQGRL
Trigger: GAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAG...AAACAGCTGGTGTAAACCTACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAATGTCCGTCTGCTCGTaGTCCATCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVMSVCS*SISSCT
Trigger: TGTGCAGCTGCTGATGGAGCACGAGCAGACGGACAT...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCATATGCAGCAGCGTGTaGAGCGGCTCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: CEVRTRKRARTFHPDRGGICSSV*SGSRVS
Trigger: GCTGACCCTGGAGCCGCTGCACACGCTGCTGCATAT...GCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCAGCCACCCCATCTTGTaGGTCAGGGCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTSHPIL*VRAKGC
Trigger: GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCT...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGAGCCACCCCATCTTGTaGGTCAGGGCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILSHPIL*VRAKGC
Trigger: GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCT...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATTCCGAGAGGATGGACTaGAGATCCGAGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDSERMD*RSEGLS
Trigger: GCTGAGACCCTCGGATCTGCAGTCCATCCTCTCGGA...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHEEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 4 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
61% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATGCTCCTCAAGACTGCTaGCCCTTTCCCGCCATCCAT +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDAPQDC*PFPAIH
Trigger: ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGC...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACCCTGCTCCTCAAGACTaGTGCCCCTTTCCCGCCATC +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHPAPQD*CPFPAI
Trigger: GATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGG...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp AAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGAAAGACTCCTCTCCCTaGTCCTCAAGACTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KRARTFHPDRGGPAGLARKDSSP*SSRLLP
Trigger: GGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTT...CCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GCCCCTCAGTTCAGACACCCACTGAGCACTGAGCACGAGGGTGCACTCTGCTTCGAAACTGGCCCAGAGTaGACTGCTAGGCCCCGACTC +
Preference number: 4 (lower is better)
Translates to: APQFRHPLSTEHEGALCFETGPE*TARPRL
Trigger: GAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTC...GAAGCAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACTGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCTTCTCCAGAGGCCCATaGCCAGCCCCGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFFSRGP*PAPTTV
Trigger: CACAGTGGTCGGGGCTGGGCATGGGCCTCTGGAGAA...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCTGGCTGGTGAGGTTCTaGGTGGTCGTGGCAACCCTT +
Preference number: 4 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPWLVRF*VVVATL
Trigger: AAGGGTTGCCACGACCACCCAGAACCTCACCAGCCA...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACCAATCTCGGGCTGGTTaGTGCATGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHQSRAG*CMLPGP
Trigger: TGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTG...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGCGCTGTACATGCCCATaGACTGGAAACCCCGCGTAT +
Preference number: 4 (lower is better)
Translates to: KRARTFHPDRGGPAGLARRCTCP*TGNPAY
Trigger: ATACGCGGGGTTTCCAGTCCATGGGCATGTACAGCG...CCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTAGTCCTTGTTGTCTTTaGGACACTTCTCGATCAGCG +
Preference number: 4 (lower is better)
Translates to: DSACSARQRTRTPALGSASPCCL*DTSRSA
Trigger: CGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACT...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTACTTGGAGTTCTGCTaGATGTTCAGGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLYLEFC*MFRSPR
Trigger: CCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTA...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCAGGTACTAAGACAAAGTaGAACCAGGCATCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARAGTKTK*NQASER
Trigger: CCTCTCGGATGCCTGGTTCCACTTTGTCTTAGTACC...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000573539.5
CDS-3UTR CCA 90 bp AAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGTCGGCCCCAGTCACCTaGAAAATCCTTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KRARTFHPDRGGPAGLARSAPVT*KILPSP
Trigger: TGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGA...CCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGAGTCTGGCACACAGAGTaGCCCAGGGCAGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: SSPRISSLPPSPAHSGMGVWHTE*PRAEKL
Trigger: CAGTTTCTCTGCCCTGGGCCACTCTGTGTGCCAGAC...TCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCGGGCAGGGGCTGCTGTaGATTGTGAAGCCTCACACA +
Preference number: 4 (lower is better)
Translates to: LPQDIQLTSVPRTLWDGIGQGLL*IVKPHT
Trigger: TGTGTGAGGCTTCACAATCCACAGCAGCCCCTGCCC...GATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCTTCTTTGTGGGGGTaGTCTCCGCCGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HAHTSSGFRFYTEVSGNSSSLWG*SPPASS
Trigger: AGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGA...GGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTTCTTCTTTGTGGGGGTaGTCTCCGCCGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RTRTPALGSASTPRFPGISSLWG*SPPASS
Trigger: AGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGA...AATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACTCTTCTTTGTGGGGGTaGTCTCCGCCGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHSSLWG*SPPASS
Trigger: AGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGA...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR TCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACCTTGGTGTTGGGGTTaGTGTTTAACAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARAPWCWG*CLTRPS
Trigger: TGAAGGCCTTGTTAAACATCAACCCCAACACCAAGG...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGGTCCTGGCTCCTTGGCGTGCGCGTTaGCGTCGGCGCCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: LLLSHSGNIFSNSKMVLAPWRAR*RRRRRR
Trigger: TCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGG...AGCCAGGACCATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTGTTGGTACTTGGGGTTaGAGAAGGCCCCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: RTRTPALGSASTPRFPGIVGTWG*RRPPWR
Trigger: ACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAAC...AATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACACGGTCACCAGGGCGTaGAGGATGTTGTTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHTVTRA*RMLLPR
Trigger: ACGAGGCAACAACATCCTTCACGCCCTGGTGACCGT...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCTGGTGTCCACGTTGGTaGGGTCGTAGAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LGQQSRTPPSLKASLHRVWCPRW*GRRGRM
Trigger: CATCCTCCCTCTACGACCTCACCAACGTGGACACCA...GACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GCCCCTCAGTTCAGACACCCACTGAGCACTGAGCACGAGGGTGCACTCTGCTTCAGTTCAGACACCCACTaGGCACTGAGCACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: APQFRHPLSTEHEGALCFSSDTH*ALSTRV
Trigger: CACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACT...GAAGCAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCCACTCTGATGCTTCTTaGCTTATGGCTTCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLHSDAS*LMASLG
Trigger: ACCAAGGGAAGCCATAAGTCAAGAAGCATCAGAGTG...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCGCCCTCAGACACGGCTaGAAAGATGCGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LPQDIQLTSVPRTLWDGIALRHG*KDALLQ
Trigger: CTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGC...GATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAGAGGCCGTCAGCTTGTaGATGAGGAAGTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQEAVSL*MRKSGT
Trigger: TGTGCCTGACTTCCTCATGCACAAGCTGACGGCCTC...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCTCTCGGGCTGGTTGGTaGATGCTGCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SISPSQADLQLVKPEASPSRAGW*MLPGPG
Trigger: CCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGA...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGATGTCCGTCTGCTCGTaGTCCATCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: ASRAGLHHPSKPLCTESVMSVCS*SISSCT
Trigger: TGTGCAGCTGCTGATGGAGCACGAGCAGACGGACAT...CACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GTGCATGAGGAAGTCAGGCACATCCTCATCATGGCGCCGCCTGCAAAGCTCCTGTCAGGATCTCCGCCTTaGCCATCTTGGCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VHEEVRHILIMAPPAKLLSGSPP*PSWRPA
Trigger: AGCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGA...CAGGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCCTGACTTCCTCATGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GCAGAGAAACTGGCCCAGAGTGCACTGCTAGGCCCCGACTCTTCAGTTTGCCTCTCAGGATCTCCGCCTTaGCCATCTTGGCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AEKLAQSALLGPDSSVCLSGSPP*PSWRPA
Trigger: AGCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGA...GAGGCAAACTGAAGAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCAATATGCAGCAGCGTGTaGAGCGGCTCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSICSSV*SGSRVS
Trigger: GCTGACCCTGGAGCCGCTGCACACGCTGCTGCATAT...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGAGCCACCCCATCTTGTaGGTCAGGGCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGSHPIL*VRAKGC
Trigger: GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCT...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: CEVRTRKRARTFHPDRGGILPRS*SHPILC
Trigger: GCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT...GCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RTRTPALGSASTPRFPGIILPRS*SHPILC
Trigger: GCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT...AATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp TGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCTCCGAGAGGATGGACTaGAGATCCGAGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: CEVRTRKRARTFHPDRGGSERMD*RSEGLS
Trigger: GCTGAGACCCTCGGATCTGCAGTCCATCCTCTCGGA...GCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 4 (lower is better)
Translates to: IRKHSRKSSSATLHSSPIVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...GATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCCCTGCTCCTCAAGACTaGTGCCCCTTTCCCGCCATC +
Preference number: 4 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSPAPQD*CPFPAI
Trigger: GATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGG...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGAAAAGACTCCTCTCCCTaGTCCTCAAGACTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSPRISSLPPSPAHSGMGKDSSP*SSRLLP
Trigger: GGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTT...TCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGTTCTCCAGAGGCCCATaGCCAGCCCCGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRFSRGP*PAPTTV
Trigger: CACAGTGGTCGGGGCTGGGCATGGGCCTCTGGAGAA...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCCCCCGGGTGGGACTGTaGCTGAGGCGGCGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLPRVGL*LRRREA
Trigger: AGCTTCCCGCCGCCTCAGCCACAGTCCCACCCGGGG...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp CAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGACTGGCTGGTGAGGTTCTaGGTGGTCGTGGCAACCCTT +
Preference number: 4 (lower is better)
Translates to: QQSRTPPSLKASLHRVGDWLVRF*VVVATL
Trigger: AAGGGTTGCCACGACCACCCAGAACCTCACCAGCCA...GTCACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTGGCAGGGTTCCCACTaGGGGCAGCAACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTWQGSH*GQQLSC
Trigger: GCAAGAGAGTTGCTGCCCCCAGTGGGAACCCTGCCA...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCATGGCAACTGTGGGGTTaGGTTCAAACCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARAWQLWG*VQTLLS
Trigger: AGATAGAAGGGTTTGAACCCAACCCCACAGTTGCCA...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCAGGAGGAGAGGTCTTaGCAACTGTGGGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDQEERS*QLWGWV
Trigger: AACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTG...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTTGGCCAGCTGTGCACTaGGGCTGTTGGGATTGGATG +
Preference number: 4 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSWPAVH*GCWDWM
Trigger: CATCCAATCCCAACAGCCCCAGTGCACAGCTGGCCA...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCTCCTCTGCTCTTCCTTaGCCAGCTGTGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSSSALP*PAVHWG
Trigger: GCCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGA...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCGGCACATCCTCATCATaGCGCCGCCTGCAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTGTSSS*RRLQSS
Trigger: GGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCC...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTTCACACCTGCCGCCGCTCGATaGCGATGTTCAGCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SSSQLPLRSRIMSYMRFTPAAAR*RCSAPS
Trigger: AGACGGCGCTGAACATCGCCATCGAGCGGCGGCAGG...TGTGAAGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCCGCTGTACATGCCCATaGACTGGAAACCCCGCGTAT +
Preference number: 4 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPRCTCP*TGNPAY
Trigger: ATACGCGGGGTTTCCAGTCCATGGGCATGTACAGCG...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCAGTCCTTGTTGTCTTTaGGACACTTCTCGATCAGCG +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLSPCCL*DTSRSA
Trigger: CGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACT...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp AGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAAACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: SLPPSPAHSGMGSRVSHKTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...TTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGCGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGA +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILRAHQL*VPLLHR
Trigger: TCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCG...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTCGGCCCCAGTCACCTaGAAAATCCTTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRSAPVT*KILPSP
Trigger: TGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGA...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTAACATCTCCAACATCTaGAGCAGTTGCTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: DSACSARQRTRTPALGSANISNI*SSCWIL
Trigger: CAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTT...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCATCTCCATTCCCCACTTaGACAAAAGCTGGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARASPFPT*TKAGRL
Trigger: TAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGA...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTGACGGCCCATCTACCTaGGCCCTGCCCAGAGCGAAA +
Preference number: 4 (lower is better)
Translates to: SPSQADLQLVKPEASPGTDGPST*ALPRAK
Trigger: TTTCGCTCTGGGCAGGGCCCAGGTAGATGGGCCGTC...AGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CAA 72 bp GGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTaGCCCGGAGTGTCTCATGCAGACTTTTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GPFTQIAAAQQD*PGVSHADFCVC
Trigger: ACACACACAAAAGTCTGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGGGCTTTCATGGCTGGTaGGGTTCTGGGTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRGFHGW*GSGWSW
Trigger: CCACGACCACCCAGAACCTCACCAGCCATGAAAGCC...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR TCA 90 bp TGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCAACTCTCTTGCCCATaGGAGGCACCATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CEVRTRKRARTFHPDRGGQLSCP*EAPSPW
Trigger: CCAAGGAGATGGTGCCTCTCATGGGCAAGAGAGTTG...GCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576742.6
CDS-3UTR TCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCCGTCAGCTTGTGCATaGGGAAGTCAGGCACATCCT +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQPSACA*GSQAHP
Trigger: AGGATGTGCCTGACTTCCTCATGCACAAGCTGACGG...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACCTTGGCGTGCGCGTTaGCGTCGGCGCCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRPWRAR*RRRRRR
Trigger: TCGCCGCCGGCGCCGACGTCAACGCGCACGCCAAGG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCGATGTTGTTGCCTCGTaGGTCCCGCGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: KGSGRVFPERIPLLPQDIDVVAS*VPRGDV
Trigger: GACATCACCTCGCGGGACTCACGAGGCAACAACATC...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTACGGTCACCAGGGCGTaGAGGATGTTGTTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISTVTRA*RMLLPR
Trigger: ACGAGGCAACAACATCCTTCACGCCCTGGTGACCGT...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: LGQQSRTPPSLKASLHRVSHSAS*SPRPRS
Trigger: TGACCGTGGCCGAGGACTTCAAGACGCAGAATGACT...GACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATAGTGATTTCCAGCACTaGGTTGTCCGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDSDFQH*VVRGGV
Trigger: GACACCACCACGGACAACTCAGTGCTGGAAATCACT...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCCAGCACTGCGTCGCTaGAGCTGCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VLLDVQVTQAYGELEEFQPALRR*SCRRSC
Trigger: GCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGG...CTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACACCCACTGAGCACTaGGCACGAGGGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGTPTEH*ARGCTL
Trigger: CAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGT...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCAGTTCAGACACCCACTaGGCACTGAGCACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSSSDTH*ALSTRV
Trigger: CACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACT...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCAGCTTGAGACAGTTTaGACCTTGGGGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSQLETV*TLGCQG
Trigger: CCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTG...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTAGGCACGCGCTACTGTaGGGTCAGGACGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPARHALL*GQDEEK
Trigger: CTTTTCCTCGTCCTGACCTCACAGTAGCGCGTGCCT...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCAGGCACGCGCTACTGTaGGGTCAGGACGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: KGSGRVFPERIPLLPQDIRHALL*GQDEEK
Trigger: CTTTTCCTCGTCCTGACCTCACAGTAGCGCGTGCCT...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTTTGCCTCAAGCCAGATaGACTTATCTATCGCCATGT +
Preference number: 4 (lower is better)
Translates to: HRVGDSACSARQRTRTPALPQAR*TYLSPC
Trigger: ACATGGCGATAGATAAGTTCATCTGGCTTGAGGCAA...AGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCATGGAGCTTGGCATCATaGATCCAAACCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARAWSLAS*IQTTSF
Trigger: AAAGGAAGTGGTTTGGATTCATGATGCCAAGCTCCA...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGGCCCTCAGACACGGCTaGAAAGATGCGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQALRHG*KDALLQ
Trigger: CTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGC...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGCGCCTGCAAAGCTCCTaGAGCTCCACCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILRLQSS*SSTSNS
Trigger: AGAGTTGCTGGTGGAGCTGCAGGAGCTTTGCAGGCG...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGCATCATGGCGCCGCCTaGAAAGCTCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGHHGAA*KAPAAP
Trigger: TGGAGCTGCAGGAGCTTTGCAGGCGGCGCCATGATG...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCCAATCGGCCCCATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCACATCATGGCGCCGCCTaGAAAGCTCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PNRPHQGHKVSICPASLAHHGAA*KAPAAP
Trigger: TGGAGCTGCAGGAGCTTTGCAGGCGGCGCCATGATG...TGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGATGGGGCCGATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGGAGGCCGTCAGCTTGTaGATGAGGAAGTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQEAVSL*MRKSGT
Trigger: TGTGCCTGACTTCCTCATGCACAAGCTGACGGCCTC...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATGGCGATGAGCAGGGCTaGGATGTCCCCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GSASTPRFPGIPRLLQMHGDEQG*DVPLPP
Trigger: CGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC...ATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACAAGGCCCCCTTGGCGTaGGCGTTGACGTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYKAPLA*ALTSAP
Trigger: CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTT...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCTGGTTGGTGCATGCTaGCAGGGCCAGGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: IRKHSRKSSSATLHSSPILVGAC*QGQGRL
Trigger: GAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAG...GATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCATGTCCGTCTGCTCGTaGTCCATCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: HAHTSSGFRFYTEVSGNSMSVCS*SISSCT
Trigger: TGTGCAGCTGCTGATGGAGCACGAGCAGACGGACAT...GGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCGAGGTGATGTCCGTCTaGTCGTGCTCCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSEVMSV*SCSISS
Trigger: GCTGCTGATGGAGCACGAGCAGACGGACATCACCTC...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTGAGGTGATGTCCGTCTaGTCGTGCTCCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPAEVMSV*SCSISS
Trigger: GCTGCTGATGGAGCACGAGCAGACGGACATCACCTC...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGGAGGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCTCCAGCTCCCAGTTaGCACTCCGCAGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: QEERLLSLLLKTAAPFPPSPAPS*HSAVGS
Trigger: TGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGA...TGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTTCAGGATCTCCGCCTTaGCCATCTTGGCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HPRPLCTALPSGICSSAISGSPP*PSWRPA
Trigger: AGCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGA...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYILPRS*SHPILC
Trigger: GCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATTCCGAGAGGATGGACTaGAGATCCGAGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYSERMD*RSEGLS
Trigger: GCTGAGACCCTCGGATCTGCAGTCCATCCTCTCGGA...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: LGQQSRTPPSLKASLHRVEEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...GACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGACGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: QQSRTPPSLKASLHRVGDEEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...GTCACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATTCTGCAGGCGCCAGATaGGTTCGCTCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYSAGAR*VRSPWR
Trigger: TCTCCAAGGAGAGCGAACGCATCTGGCGCCTGCAGA...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTCATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCCATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCGCTCCTCAAGACTGCTaGCCCTTTCCCGCCATCCAT +
Preference number: 4 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFAPQDC*PFPAIH
Trigger: ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGC...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGGAGGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCAAAAGACTCCTCTCCCTaGTCCTCAAGACTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QEERLLSLLLKTAAPFPPKDSSP*SSRLLP
Trigger: GGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTT...TGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTGAAACTGGCCCAGAGTaGACTGCTAGGCCCCGACTC +
Preference number: 4 (lower is better)
Translates to: HPRPLCTALPSGICSSAIETGPE*TARPRL
Trigger: GAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTC...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR GCA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCCATCTACCTGGGCCCTaGCCAGAGCGAAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFHLPGP*PERKVT
Trigger: TGTGACCTTTCGCTCTGGGCAGGGCCCAGGTAGATG...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTTCTTCTCTGGCAGGATaGCAGGGTTCCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPSSLAG*QGSHWG
Trigger: CCCCCAGTGGGAACCCTGCCATCCTGCCAGAGAAGA...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGTCTTCTCTGGCAGGATaGCAGGGTTCCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGSSLAG*QGSHWG
Trigger: CCCCCAGTGGGAACCCTGCCATCCTGCCAGAGAAGA...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCTGGGGCTGTTGGGATTaGATGGGGTCTCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPWGCWD*MGSLSH
Trigger: ATGTGACAGAGACCCCATCCAATCCCAACAGCCCCA...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCTCCTCTGCTCTTCCTTaGCCAGCTGTGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: GPGSSLRKETCVFHSVHFSSALP*PAVHWG
Trigger: GCCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGA...GAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TGGTCTCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTGGCACATCCTCATCATaGCGCCGCCTGCAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: WSPAPSCHSAVGSCRTCAGTSSS*RRLQSS
Trigger: GGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCC...AGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTCAATCTCGGGCTGGTTaGTGCATGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPSQADLQLVKPEASPGTQSRAG*CMLPGP
Trigger: TGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTG...AGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCTGCACAATCTCGGGCTaGTTGGTGCATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSCTISG*LVHAAR
Trigger: CCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCA...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGGAGGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCACATCGTTGTTGCGAGTaGTCTCCAGCTCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: QEERLLSLLLKTAAPFPPHRCCE*SPAPSC
Trigger: GCAACTGGGAGCTGGAGACCACTCGCAACAACGATG...TGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGCCTCCACAGCTCTGATATGACCTTCCTGCATGACTTTGCCCAAGTACACATTCCAAGGGGTGCGGGATaGCCTCCTCCTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLHSSDMTFLHDFAQVHIPRGAG*PPPPGG
Trigger: GCCCCCGGGAGGAGGAGGCCATCCCGCACCCCTTGG...AATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTAGGCATCCGAGAGGATaGACTGCAGATCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPARHPRG*TADPRV
Trigger: GACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCT...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp TGCAGCGGCGTGAGGCCATCGTTGTTGCGAGTGGTCTCCAGCTCCCAGTTGCCATGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: CSGVRPSLLRVVSSSQLPCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...TGGCAACTGGGAGCTGGAGACCACTCGCAACAACGATGGCCTCACGCCGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp GGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: GKTPLPAPQDCCPFPAIHTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATGTCTGGCACACAGAGTaGCCCAGGGCAGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYVWHTE*PRAEKL
Trigger: CAGTTTCTCTGCCCTGGGCCACTCTGTGTGCCAGAC...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATGGGCAGGGGCTGCTGTaGATTGTGAAGCCTCACACA +
Preference number: 4 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYGQGLL*IVKPHT
Trigger: TGTGTGAGGCTTCACAATCCACAGCAGCCCCTGCCC...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp ACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCACGCGATTACTCCCTaGGTCAGCTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPALGSASTPRFPGIPRLHAITP*VSWEGR
Trigger: CCTGCCCTCCCAGCTGACCCAGGGAGTAATCGCGTG...AAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CCA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCACAGCCCCGACCACTGTaGCTTAGAGCACGCGATTAC +
Preference number: 4 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSQPRPL*LRARDY
Trigger: GTAATCGCGTGCTCTAAGCCACAGTGGTCGGGGCTG...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAACCAAGGAAGACAAAGTaGAACCAGGCATCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQPRKTK*NQASER
Trigger: CCTCTCGGATGCCTGGTTCCACTTTGTCTTCCTTGG...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577016.5
CDS-3UTR TCA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAGGCTTTCATGGCTGGTaGGGTTCTGGGTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGGFHGW*GSGWSW
Trigger: CCACGACCACCCAGAACCTCACCAGCCATGAAAGCC...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCGGCTTTCATGGCTGGTaGGGTTCTGGGTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: KTKWNQASERMDCRSEGLGFHGW*GSGWSW
Trigger: CCACGACCACCCAGAACCTCACCAGCCATGAAAGCC...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCCAACTCTCTTGCCCATaGGAGGCACCATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSQLSCP*EAPSPW
Trigger: CCAAGGAGATGGTGCCTCTCATGGGCAAGAGAGTTG...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR TCA 90 bp GGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCGTTGGTACTTGGGGTTaGAGAAGGCCCCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: GPGSSLRKETCVFHSVHFVGTWG*RRPPWR
Trigger: ACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAAC...GAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp AGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAGGTTTACACCAGCTGTTTGTTGGTACTTGGGGTTaGAGAAGGCCCCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: RRLPGSRLLLAVGLHQLFVGTWG*RRPPWR
Trigger: ACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAAC...AAACAGCTGGTGTAAACCTACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TGGTCTCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTGATGTTGTTGCCTCGTaGGTCCCGCGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: WSPAPSCHSAVGSCRTCADVVAS*VPRGDV
Trigger: GACATCACCTCGCGGGACTCACGAGGCAACAACATC...AGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: KGSGRVFPERIPLLPQDISHSAS*SPRPRS
Trigger: TGACCGTGGCCGAGGACTTCAAGACGCAGAATGACT...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATGGTGTCCACGTTGGTaGGGTCGTAGAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: IILGHFAQLSHPESAPQPWCPRW*GRRGRM
Trigger: CATCCTCCCTCTACGACCTCACCAACGTGGACACCA...TGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGTGGTGTCCACGTTGGTaGGGTCGTAGAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRWCPRW*GRRGRM
Trigger: CATCCTCCCTCTACGACCTCACCAACGTGGACACCA...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCTGCACATGGCCCAGATaGGCACAAACATCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: LGQQSRTPPSLKASLHRVCTWPR*AQTSSL
Trigger: TAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCA...GACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCACCAGCACTGCGTCGCTaGAGCTGCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSPALRR*SCRRSC
Trigger: GCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGG...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp AGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAGGTTTACACCAGCTGTTTAGTTCAGACACCCACTaGGCACTGAGCACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RRLPGSRLLLAVGLHQLFSSDTH*ALSTRV
Trigger: CACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACT...AAACAGCTGGTGTAAACCTACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp GGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCAGTTCAGACACCCACTaGGCACTGAGCACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GPGSSLRKETCVFHSVHFSSDTH*ALSTRV
Trigger: CACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACT...GAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR TCA 90 bp CAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCCCCACTCAGACAAATTaGCAACTGCCCCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: QTAHAHTSSGFRFYTEVSPTQTN*QLPLSS
Trigger: TGAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGG...GGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR TCA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGCCCACTCAGACAAATTaGCAACTGCCCCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRPTQTN*QLPLSS
Trigger: TGAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGG...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGCCAGATGTGGAATGCTaGTTTGTACAATCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMPDVEC*FVQSPG
Trigger: GCCTGGAGATTGTACAAATCAGCATTCCACATCTGG...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGCACTCTGATGCTTCTTaGCTTATGGCTTCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMHSDAS*LMASLG
Trigger: ACCAAGGGAAGCCATAAGTCAAGAAGCATCAGAGTG...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGTCCACAGCTCTGATATaGCCTTCCTGCATGACTTTG +
Preference number: 4 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMSTALI*PSCMTL
Trigger: CAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGA...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTGCCAAAGGCACTATCTaGACCTGGGAGACCCCATCC +
Preference number: 4 (lower is better)
Translates to: SPSQADLQLVKPEASPGTAKGTI*TWETPS
Trigger: GGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGC...AGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCACACGGCTGCAAAGATaGGCTTCTTCAGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTTRLQR*ASSAAS
Trigger: AGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGT...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TTCATCAGGCAGGTCTTCCCCGTGTCGGAGGCCGTCAGCTTGTGCATGAGGAAGGCCCTCAGACACGGCTaGAAAGATGCGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: FIRQVFPVSEAVSLCMRKALRHG*KDALLQ
Trigger: CTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGC...CTTCCTCATGCACAAGCTGACGGCCTCCGACACGGGGAAGACCTGCCTGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGGAGGCCGTCAGCTTGTaGATGAGGAAGTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILEAVSL*MRKSGT
Trigger: TGTGCCTGACTTCCTCATGCACAAGCTGACGGCCTC...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACAGCTGCGATGTCCCCCTaGCGCCGCTCGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTAAMSP*RRSMAM
Trigger: CATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGC...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACAGCTGCGATGTCCCCCTaGCGCCGCTCGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTAAMSP*RRSMAM
Trigger: CATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGC...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATCTCGGGCTGGTTGGTaGATGCTGCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSSRAGW*MLPGPG
Trigger: CCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGA...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTGCTCCATCAGCAGCTaGACAATCTCGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTCSISS*TISGWL
Trigger: CAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCA...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTATTCACAAAGTCATTCTaGGTCTTGAAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVFTKSF*VLKSSA
Trigger: GGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAA...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCTCTCCAGCTCCCAGTTaGCACTCCGCAGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSSPAPS*HSAVGS
Trigger: TGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGA...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCTCAGGATCTCCGCCTTaGCCATCTTGGCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SISPSQADLQLVKPEASPSGSPP*PSWRPA
Trigger: AGCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGA...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ACAGTGATTTCCAGCACTGAGTTGTCCGTGGTGGTGTCCACGTTGGTGAGGTCGATATGCAGCAGCGTGTaGAGCGGCTCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TVISSTELSVVVSTLVRSICSSV*SGSRVS
Trigger: GCTGACCCTGGAGCCGCTGCACACGCTGCTGCATAT...CGACCTCACCAACGTGGACACCACCACGGACAACTCAGTGCTGGAAATCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGTTCTTCCACTTCATATaGAGCAGCGTGTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQFFHFI*SSVCSG
Trigger: GCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAA...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGAGCAGGAAGATGGCAATaGCCTCTTTCACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: SSPRISSLPPSPAHSGMGAGRWQ*PLSQRC
Trigger: GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGC...TCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQSCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILEEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTTCTGCAGGCGCCAGATaGGTTCGCTCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPSAGAR*VRSPWR
Trigger: TCTCCAAGGAGAGCGAACGCATCTGGCGCCTGCAGA...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTGATTTTGTTGAAATCTaGTGTTCGTCTTACAGGCCC +
Preference number: 4 (lower is better)
Translates to: HRVGDSACSARQRTRTPADFVEI*CSSYRP
Trigger: GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATC...AGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCCCTGCTCCTCAAGACTaGTGCCCCTTTCCCGCCATC +
Preference number: 4 (lower is better)
Translates to: SISPSQADLQLVKPEASPPAPQD*CPFPAI
Trigger: GATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGG...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACCCCGACTCTTCAGTTTaGCTCAAGCCAGATGAACTT +
Preference number: 4 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHPDSSV*LKPDEL
Trigger: AAGTTCATCTGGCTTGAGGCAAACTGAAGAGTCGGG...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCATCTACCTGGGCCCTaGCCAGAGCGAAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPHLPGP*PERKVT
Trigger: TGTGACCTTTCGCTCTGGGCAGGGCCCAGGTAGATG...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCAAGATCACCGCATGTCTaGGGCCCAAGGCCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GFRFYTEVSGNSSTSSNARSPHV*GPRPPG
Trigger: ACCCGGGGGCCTTGGGCCCCAGACATGCGGTGATCT...TGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCTGGCAGGGTTCCCACTaGGGGCAGCAACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: QLWVPLLHRGFREFLDFFWQGSH*GQQLSC
Trigger: GCAAGAGAGTTGCTGCCCCCAGTGGGAACCCTGCCA...GAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCTCTTCTCTGGCAGGATaGCAGGGTTCCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: KTKWNQASERMDCRSEGLSSLAG*QGSHWG
Trigger: CCCCCAGTGGGAACCCTGCCATCCTGCCAGAGAAGA...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp GTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAACGCCGGCCTCTTCTCTaGCAGGATGGCAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VFGTLLDQRGQGYSKSKQRRPLL*QDGRVP
Trigger: GGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCG...TTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCCAGGAGGAGAGGTCTTaGCAACTGTGGGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSQEERS*QLWGWV
Trigger: AACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTG...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGATGTTGGAATCCATaGGCTTGGAGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: QTAHAHTSSGFRFYTEVSGCWNP*AWRRQE
Trigger: CTCCTGTCTTCTCCAAGCCCATGGATTCCAACATCC...GGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp ACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTTGCACTGCCGGATGTTaGAATCCATGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TRKRARTFHPDRGGPAGLCTAGC*NPWAWR
Trigger: TCTCCAAGCCCATGGATTCCAACATCCGGCAGTGCA...AAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGATCCTCTGCTCTTCCTTaGCCAGCTGTGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGSSALP*PAVHWG
Trigger: GCCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGA...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGACAATCTCGGGCTGGTTaGTGCATGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGQSRAG*CMLPGP
Trigger: TGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTG...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTTGCACAATCTCGGGCTaGTTGGTGCATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HPRPLCTALPSGICSSAICTISG*LVHAAR
Trigger: CCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCA...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp GCAGAGAAACTGGCCCAGAGTGCACTGCTAGGCCCCGACTCTTCAGTTTGCCTCCGCTGTACATGCCCATaGACTGGAAACCCCGCGTAT +
Preference number: 4 (lower is better)
Translates to: AEKLAQSALLGPDSSVCLRCTCP*TGNPAY
Trigger: ATACGCGGGGTTTCCAGTCCATGGGCATGTACAGCG...GAGGCAAACTGAAGAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGCGCTGTACATGCCCATaGACTGGAAACCCCGCGTAT +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILRCTCP*TGNPAY
Trigger: ATACGCGGGGTTTCCAGTCCATGGGCATGTACAGCG...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGAGTCCTTGTTGTCTTTaGGACACTTCTCGATCAGCG +
Preference number: 4 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMSPCCL*DTSRSA
Trigger: CGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACT...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp TCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATACTTGGAGTTCTGCTaGATGTTCAGGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: SSPRISSLPPSPAHSGMGYLEFC*MFRSPR
Trigger: CCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTA...TCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp GGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: GPGSSLRKETCVFHSVHFTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...GAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGACGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGA +
Preference number: 4 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGRAHQL*VPLLHR
Trigger: TCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCG...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GCAGAGAAACTGGCCCAGAGTGCACTGCTAGGCCCCGACTCTTCAGTTTGCCTCTCGGCCCCAGTCACCTaGAAAATCCTTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: AEKLAQSALLGPDSSVCLSAPVT*KILPSP
Trigger: TGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGA...GAGGCAAACTGAAGAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTGAGTGGATTTTCTGGTaGTTTCGGCCCCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSEWIFW*FRPQSP
Trigger: AGGTGACTGGGGCCGAAACCACCAGAAAATCCACTC...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATATAACGGCGGCAGAGTaGATTTTCTGGTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDITAAE*IFWWFR
Trigger: CCGAAACCACCAGAAAATCCACTCTGCCGCCGTTAT...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGTCTGTCCAGCTAGTCTaGCACACAGAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRSVQLV*HTEWPR
Trigger: CCTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGA...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CAA 72 bp CCGCCATCCATCTCTCCCAGCCAAGCCGACCTGCAATaGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PPSISPSQADLQ*VKPEASPGTSG
Trigger: TCCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGATGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
3UTR CAA 72 bp TGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCGTCGCTGAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CWMFRSPRPMVS*KSSSTASLKLP
Trigger: CGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
3UTR CAA 72 bp ATCAGGCAGGTCTTCCCCGTGTCGGAGGCCGTCAGCTaGTGCATGAGGAAGTCAGGCACATCCTCATCATGG +
Preference number: 4 (lower is better)
Translates to: IRQVFPVSEAVS*CMRKSGTSSSW
Trigger: CCATGATGAGGATGTGCCTGACTTCCTCATGCACAAGCTGACGGCCTCCGACACGGGGAAGACCTGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CAA 72 bp AGGCCATCGTTGTTGCGAGTGGTCTCCAGCTCCCAGTaGCCACTCCGCAGTAGGATCATGTCGTACATGCGC +
Preference number: 4 (lower is better)
Translates to: RPSLLRVVSSSQ*PLRSRIMSYMR
Trigger: GCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGACCACTCGCAACAACGATGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCTCTTCTTTGTGGGGGTaGTCTCCGCCGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SISPSQADLQLVKPEASPSSLWG*SPPASS
Trigger: AGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGA...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR TCA 90 bp TTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGCCAGCTGCAGCGGCGTaGGGCCATCGTTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: LLKSAVRLTGPGSSLRKEPAAAA*GHRCCE
Trigger: CTCGCAACAACGATGGCCTCACGCCGCTGCAGCTGG...CTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGCAGATTTCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCAGTCGTAGAGGGAGGATaGCACGGGTCCGTACGCCCA +
Preference number: 4 (lower is better)
Translates to: GFRFYTEVSGNSSTSSNAVVEGG*HGSVRP
Trigger: TGGGCGTACGGACCCGTGTCATCCTCCCTCTACGAC...TGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTTCACATGGTGTCCACGTTGGTaGGGTCGTAGAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: SSSQLPLRSRIMSYMRFTWCPRW*GRRGRM
Trigger: CATCCTCCCTCTACGACCTCACCAACGTGGACACCA...TGTGAAGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGTCCTCGGCCACGGTCACCAGTGGTGTCCACGTTGGTaGGGTCGTAGAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: HALHKVILRLEVLGHGHQWCPRW*GRRGRM
Trigger: CATCCTCCCTCTACGACCTCACCAACGTGGACACCA...CTGGTGACCGTGGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAAGCGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp ATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCTGGTGTTGTAGACAGTaGTTTCCAGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: ILPRSCSHPILCVRAKGCWCCRQ*FPALSC
Trigger: ACAACTCAGTGCTGGAAATCACTGTCTACAACACCA...GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTGCACATGGCCCAGATaGGCACAAACATCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTCTWPR*AQTSSL
Trigger: TAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCA...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTTCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 4 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSSTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACATCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAAACACCCACTGAGCACTaGGCACGAGGGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKTPTEH*ARGCTL
Trigger: CAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGT...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACCCCACTCAGACAAATTaGCAACTGCCCCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHPTQTN*QLPLSS
Trigger: TGAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGG...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAGTTAAATTCCCCCACTaGGACATACTGAGGTATGCG +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQVKFPH*DILRYA
Trigger: CGCATACCTCAGTATGTCTCAGTGGGGGAATTTAAC...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCCACTCTGATGCTTCTTaGCTTATGGCTTCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPHSDAS*LMASLG
Trigger: ACCAAGGGAAGCCATAAGTCAAGAAGCATCAGAGTG...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GCCCCTCAGTTCAGACACCCACTGAGCACTGAGCACGAGGGTGCACTCTGCTTCCAAGGGAGAATGGGGTaGCGATTCTGTGTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: APQFRHPLSTEHEGALCFQGRMG*RFCVWN
Trigger: GTTCCAAACACAGAATCGTCACCCCATTCTCCCTTG...GAAGCAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTACACGGCTGCAAAGATaGGCTTCTTCAGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: HPRPLCTALPSGICSSAITRLQR*ASSAAS
Trigger: AGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGT...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp AGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTGCGTCGCTGAAGGCCCTCAGACACGGCTaGAAAGATGCGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RSPRPMVSLKSSSTASLKALRHG*KDALLQ
Trigger: CTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGC...CTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGACGCCTGCAAAGCTCCTaGAGCTCCACCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRRLQSS*SSTSNS
Trigger: AGAGTTGCTGGTGGAGCTGCAGGAGCTTTGCAGGCG...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAGGCGATGAGCAGGGCTaGGATGTCCCCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRGDEQG*DVPLPP
Trigger: CGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CCCAATCGGCCCCATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCATGCTCCATCAGCAGCTaGACAATCTCGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PNRPHQGHKVSICPASLACSISS*TISGWL
Trigger: CAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCA...TGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGATGGGGCCGATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGCCCTCAGACACGGCTGCAAAGATGCGCTTCTTCAGCCGCCTCTTTTTCCTCATGTCCGTCTGCTCGTaGTCCATCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: QPSDTAAKMRFFSRLFFLMSVCS*SISSCT
Trigger: TGTGCAGCTGCTGATGGAGCACGAGCAGACGGACAT...GAGGAAAAAGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAGAGGTGATGTCCGTCTaGTCGTGCTCCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGEVMSV*SCSISS
Trigger: GCTGCTGATGGAGCACGAGCAGACGGACATCACCTC...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CGGCCACGGTCACCAGGGCGTGAAGGATGTTGTTGCCTCGTGAGTCCCGCGAGGGGATCATGTCGTACATaGGCTTCACAAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: RPRSPGREGCCCLVSPARGSCRT*ASQSHS
Trigger: AGAATGACTTTGTGAAGCGCATGTACGACATGATCC...CCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATTTCTTCCACTTCATATaGAGCAGCGTGTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYFFHFI*SSVCSG
Trigger: GCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAA...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAGCCACCCCATCTTGTaGGTCAGGGCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: VFGTLLDQRGQGYSKSKQSHPIL*VRAKGC
Trigger: GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCT...TTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACGCAGGAAGATGGCAATaGCCTCTTTCACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHAGRWQ*PLSQRC
Trigger: GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGC...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCGCAGGAAGATGGCAATaGCCTCTTTCACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: HAHTSSGFRFYTEVSGNSAGRWQ*PLSQRC
Trigger: GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGC...GGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCCGAGAGGATGGACTaGAGATCCGAGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: VRLTGPGSSLRKETCVFHSERMD*RSEGLS
Trigger: GCTGAGACCCTCGGATCTGCAGTCCATCCTCTCGGA...ATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFEEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp TCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: SPSQADLQLVKPEASPGTEEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...AGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTGGATACTTGGAGTTCTaGTGGATGTTCAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSGYLEF*WMFRSP
Trigger: GGGTGACCTGAACATCCAGCAGAACTCCAAGTATCC...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TTCTGGTGGTTTCGGCCCCAGTCACCTGGAAAATCCTTCCGTCTCCACTTCACCTCTGCAGGCGCCAGATaGGTTCGCTCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FWWFRPQSPGKSFRLHFTSAGAR*VRSPWR
Trigger: TCTCCAAGGAGAGCGAACGCATCTGGCGCCTGCAGA...GGTGAAGTGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGAAACCACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATCATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: VRLTGPGSSLRKETCVFHHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...ATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp CACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: HSRKSSSATLHSSPIRNLHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...CAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp CAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 4 (lower is better)
Translates to: QLWVPLLHRGFREFLDFFPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...GAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATAGACAAATTGACAACTaGCCCTCAGTTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDRQIDN*PSVQTP
Trigger: GGGTGTCTGAACTGAGGGGCAGTTGTCAATTTGTCT...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCAGCTCCTCAAGACTGCTaGCCCTTTCCCGCCATCCAT +
Preference number: 4 (lower is better)
Translates to: CSSYRPRVFVKEGDVRLPAPQDC*PFPAIH
Trigger: ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGC...TGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR GCA 90 bp AAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGAACATCTGGAGCAGTTaGTGGATTCTGTTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: KRARTFHPDRGGPAGLARNIWSS*WILLSQ
Trigger: TTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTT...CCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACCCCGGGTGGGACTGTaGCTGAGGCGGCGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRPRVGL*LRRREA
Trigger: AGCTTCCCGCCGCCTCAGCCACAGTCCCACCCGGGG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp CACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGTGGCTGGTGAGGTTCTaGGTGGTCGTGGCAACCCTT +
Preference number: 4 (lower is better)
Translates to: HSRKSSSATLHSSPIRNLWLVRF*VVVATL
Trigger: AAGGGTTGCCACGACCACCCAGAACCTCACCAGCCA...CAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGAGGTCTTGGCAACTGTaGGGTTGGGTTCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQRSWQL*GWVQTL
Trigger: AAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCT...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGACAGGTCTTGGCAACTGTaGGGTTGGGTTCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: QQSRTPPSLKASLHRVGDRSWQL*GWVQTL
Trigger: AAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCT...GTCACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGGGATGTTGGAATCCATaGGCTTGGAGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQGCWNP*AWRRQE
Trigger: CTCCTGTCTTCTCCAAGCCCATGGATTCCAACATCC...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCATGCACTGCCGGATGTTaGAATCCATGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSCTAGC*NPWAWR
Trigger: TCTCCAAGCCCATGGATTCCAACATCCGGCAGTGCA...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GCAGAGAAACTGGCCCAGAGTGCACTGCTAGGCCCCGACTCTTCAGTTTGCCTCTGGGGCTGTTGGGATTaGATGGGGTCTCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: AEKLAQSALLGPDSSVCLWGCWD*MGSLSH
Trigger: ATGTGACAGAGACCCCATCCAATCCCAACAGCCCCA...GAGGCAAACTGAAGAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTGGGGCTGTTGGGATTaGATGGGGTCTCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTWGCWD*MGSLSH
Trigger: ATGTGACAGAGACCCCATCCAATCCCAACAGCCCCA...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGATGGCCAGCTGTGCACTaGGGCTGTTGGGATTGGATG +
Preference number: 4 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGWPAVH*GCWDWM
Trigger: CATCCAATCCCAACAGCCCCAGTGCACAGCTGGCCA...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGATGCACAATCTCGGGCTaGTTGGTGCATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRCTISG*LVHAAR
Trigger: CCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCA...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATCGTTGTTGCGAGTaGTCTCCAGCTCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFHRCCE*SPAPSC
Trigger: GCAACTGGGAGCTGGAGACCACTCGCAACAACGATG...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCACCAAGGGGTGCGGGATaGCCTCCTCCTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPPRGAG*PPPPGG
Trigger: GCCCCCGGGAGGAGGAGGCCATCCCGCACCCCTTGG...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp ACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTAGGCATCCGAGAGGATaGACTGCAGATCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: TPALGSASTPRFPGIPRLRHPRG*TADPRV
Trigger: GACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCT...AAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGTCCTTGTTGTCTTTaGGACACTTCTCGATCAGCG +
Preference number: 4 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPSPCCL*DTSRSA
Trigger: CGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACT...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGTACTTGGAGTTCTGCTaGATGTTCAGGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQYLEFC*MFRSPR
Trigger: CCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTA...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTTGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp ACAGTGATTTCCAGCACTGAGTTGTCCGTGGTGGTGTCCACGTTGGTGAGGTCGACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: TVISSTELSVVVSTLVRSTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...CGACCTCACCAACGTGGACACCACCACGGACAACTCAGTGCTGGAAATCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCTCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: KGSGRVFPERIPLLPQDISQTPR*SWLSAG
Trigger: GCCTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGCGTTCACTCCAAGGATaGTCTCCTTTTCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILRSLQG*SPFPRR
Trigger: CCTTCGGGGAAAAGGAGACCATCCTTGGAGTGAACG...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR CCA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCCGTTCACTCCAAGGATaGTCTCCTTTTCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTRSLQG*SPFPRR
Trigger: CCTTCGGGGAAAAGGAGACCATCCTTGGAGTGAACG...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCGAGTGGATTTTCTGGTaGTTTCGGCCCCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFEWIFW*FRPQSP
Trigger: AGGTGACTGGGGCCGAAACCACCAGAAAATCCACTC...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTCAGGGAGACATCTGTaGTCCAAGAATCAGGACACT +
Preference number: 4 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRSGRHL*SKNQDT
Trigger: AGTGTCCTGATTCTTGGACCACAGATGTCTCCCTGA...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TGGTCTCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTGTAATCCCAGCCCTCTaGGAGGTCAAAGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: WSPAPSCHSAVGSCRTCAVIPAL*EVKVGR
Trigger: TCTGCCCACTTTGACCTCCCAGAGGGCTGGGATTAC...AGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCAACTCTCTTGCCCATaGGAGGCACCATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LTGPGSSLRKETCVFHSVQLSCP*EAPSPW
Trigger: CCAAGGAGATGGTGCCTCTCATGGGCAAGAGAGTTG...GACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATCCGTCAGCTTGTGCATaGGGAAGTCAGGCACATCCT +
Preference number: 4 (lower is better)
Translates to: VRLTGPGSSLRKETCVFHPSACA*GSQAHP
Trigger: AGGATGTGCCTGACTTCCTCATGCACAAGCTGACGG...ATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACGGCGCCGGCGGCGATaGGCAGGGCTGCGATGTCCC +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQRRRRR*AGLRCP
Trigger: GGGACATCGCAGCCCTGCTCATCGCCGCCGGCGCCG...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp TTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAGTCGTAGAGGGAGGATaGCACGGGTCCGTACGCCCA +
Preference number: 4 (lower is better)
Translates to: LLSLGHFSISEAKATPNPVVEGG*HGSVRP
Trigger: TGGGCGTACGGACCCGTGTCATCCTCCCTCTACGAC...TGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTAGTGATTTCCAGCACTaGGTTGTCCGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SPSQADLQLVKPEASPGTSDFQH*VVRGGV
Trigger: GACACCACCACGGACAACTCAGTGCTGGAAATCACT...AGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATGCACATGGCCCAGATaGGCACAAACATCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: IILGHFAQLSHPESAPQPCTWPR*AQTSSL
Trigger: TAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCA...TGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTTGCACATGGCCCAGATaGGCACAAACATCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: HPRPLCTALPSGICSSAICTWPR*AQTSSL
Trigger: TAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCA...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGTGCACATGGCCCAGATaGGCACAAACATCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGCTWPR*AQTSSL
Trigger: TAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCA...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp GAGTCAAAGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATGCCAGCACTGCGTCGCTaGAGCTGCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ESKQFWNSQLHSVELGIMPALRR*SCRRSC
Trigger: GCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGG...CATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCTTTGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTTCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 4 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISSTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCACACCCACTGAGCACTaGGCACGAGGGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLTPTEH*ARGCTL
Trigger: CAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGT...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCACCCACTCAGACAAATTaGCAACTGCCCCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSPTQTN*QLPLSS
Trigger: TGAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGG...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAAAGGCACGCGCTACTGTaGGGTCAGGACGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKRHALL*GQDEEK
Trigger: CTTTTCCTCGTCCTGACCTCACAGTAGCGCGTGCCT...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCCCCACTGAGACATACTaGGGTATGCGACTAACTGCT +
Preference number: 4 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLPTETY*GMRLTA
Trigger: AGCAGTTAGTCGCATACCTCAGTATGTCTCAGTGGG...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCTATGACCTTCCTGCATaGCTTTGCCCAAGTACACAT +
Preference number: 4 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPYDLPA*LCPSTH
Trigger: ATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATA...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACTTACCAGAGATGCACTaGCGGATGTTGGAATCCATG +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHLPEMH*RMLESM
Trigger: CATGGATTCCAACATCCGGCAGTGCATCTCTGGTAA...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCGGCGATGAGCAGGGCTaGGATGTCCCCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFGDEQG*DVPLPP
Trigger: CGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ATGCGACTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTAAGGCCCCCTTGGCGTaGGCGTTGACGTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: MRLTAEFQDDIDRAAAISKAPLA*ALTSAP
Trigger: CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTT...AGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAGTCGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAAAGGCCCCCTTGGCGTaGGCGTTGACGTCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPKAPLA*ALTSAP
Trigger: CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTT...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp TCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTGAGGTGATGTCCGTCTaGTCGTGCTCCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SYRPRVFVKEGDVRLPFSEVMSV*SCSISS
Trigger: GCTGCTGATGGAGCACGAGCAGACGGACATCACCTC...ACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGACTTCACAAAGTCATTCTaGGTCTTGAAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QQSRTPPSLKASLHRVGDFTKSF*VLKSSA
Trigger: GGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAA...GTCACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCTCTCCAGCTCCCAGTTaGCACTCCGCAGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: LTGPGSSLRKETCVFHSVSPAPS*HSAVGS
Trigger: TGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGA...GACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGATCTCCAGCTCCCAGTTaGCACTCCGCAGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGSPAPS*HSAVGS
Trigger: TGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGA...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCTTCTTCCACTTCATATaGAGCAGCGTGTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFFFHFI*SSVCSG
Trigger: GCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAA...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp ATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCTCCGAGAGGATGGACTaGAGATCCGAGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: IRKHSRKSSSATLHSSPISERMD*RSEGLS
Trigger: GCTGAGACCCTCGGATCTGCAGTCCATCCTCTCGGA...GATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATGGATACTTGGAGTTCTaGTGGATGTTCAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: GKTPLPAPQDCCPFPAIHGYLEF*WMFRSP
Trigger: GGGTGACCTGAACATCCAGCAGAACTCCAAGTATCC...ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGACAAATTGACAACTaGCCCTCAGTTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHRQIDN*PSVQTP
Trigger: GGGTGTCTGAACTGAGGGGCAGTTGTCAATTTGTCT...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAAAAGACTCCTCTCCCTaGTCCTCAAGACTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGKDSSP*SSRLLP
Trigger: GGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTT...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR GCA 90 bp ATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCATCTACCTGGGCCCTaGCCAGAGCGAAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: IRKHSRKSSSATLHSSPIHLPGP*PERKVT
Trigger: TGTGACCTTTCGCTCTGGGCAGGGCCCAGGTAGATG...GATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CCA 90 bp GTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGTGGCTGGTGAGGTTCTaGGTGGTCGTGGCAACCCTT +
Preference number: 4 (lower is better)
Translates to: VLLDVQVTQAYGELEEFQWLVRF*VVVATL
Trigger: AAGGGTTGCCACGACCACCCAGAACCTCACCAGCCA...CTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGGTCCTGGCTCGCCGGCCTCTTCTCTaGCAGGATGGCAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLLSHSGNIFSNSKMVLARRPLL*QDGRVP
Trigger: GGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCG...AGCCAGGACCATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACTGGCAACTGTGGGGTTaGGTTCAAACCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHWQLWG*VQTLLS
Trigger: AGATAGAAGGGTTTGAACCCAACCCCACAGTTGCCA...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTGGATGTTGGAATCCATaGGCTTGGAGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISGCWNP*AWRRQE
Trigger: CTCCTGTCTTCTCCAAGCCCATGGATTCCAACATCC...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTTGCACTGCCGGATGTTaGAATCCATGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSATLHSSPIRNLLLSHSCTAGC*NPWAWR
Trigger: TCTCCAAGCCCATGGATTCCAACATCCGGCAGTGCA...AGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCGCTGTTGGGATTGGATaGGGTCTCTGTCACATCATC +
Preference number: 4 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFAVGIG*GLCHII
Trigger: GATGATGTGACAGAGACCCCATCCAATCCCAACAGC...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCGCTGTTGGGATTGGATaGGGTCTCTGTCACATCATC +
Preference number: 4 (lower is better)
Translates to: KGSGRVFPERIPLLPQDIAVGIG*GLCHII
Trigger: GATGATGTGACAGAGACCCCATCCAATCCCAACAGC...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCTCCTCTGCTCTTCCTTaGCCAGCTGTGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLSSALP*PAVHWG
Trigger: GCCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGA...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCACCGCCTTGCCCATCTTaGCGGCCAGCTGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPPPCPS*RPAAAA
Trigger: CGCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGG...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp TGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCACGCTGTACATGCCCATaGACTGGAAACCCCGCGTAT +
Preference number: 4 (lower is better)
Translates to: CSSYRPRVFVKEGDVRLPRCTCP*TGNPAY
Trigger: ATACGCGGGGTTTCCAGTCCATGGGCATGTACAGCG...TGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGACGCTGTACATGCCCATaGACTGGAAACCCCGCGTAT +
Preference number: 4 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGRCTCP*TGNPAY
Trigger: ATACGCGGGGTTTCCAGTCCATGGGCATGTACAGCG...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCTGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp CCCAATCGGCCCCATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCACGTTCACTCCAAGGATaGTCTCCTTTTCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PNRPHQGHKVSICPASLARSLQG*SPFPRR
Trigger: CCTTCGGGGAAAAGGAGACCATCCTTGGAGTGAACG...TGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGATGGGGCCGATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp ATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCAGCAGAGTGGATTTTCTaGTGGTTTCGGCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: IILGHFAQLSHPESAPQPAEWIF*WFRPQS
Trigger: TGACTGGGGCCGAAACCACCAGAAAATCCACTCTGC...TGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CCA 90 bp CACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCTCCATTCCCCACTTaGACAAAAGCTGGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: HAHTSSGFRFYTEVSGNSSPFPT*TKAGRL
Trigger: TAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGA...GGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGTGGCTGAAAGCCTTTTaGGGTGGACACTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILWLKAF*GGHCWE
Trigger: TTCCCAACAGTGTCCACCCCAAAAGGCTTTCAGCCA...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
3UTR CAA 72 bp ATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IRKHSRKSSSAT*HSSPIRNLLLS
Trigger: GCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
3UTR CAA 72 bp GTGAACTTCCTGGACAGGCTCCGGAGCCGCTTCTCCTaGATCTCACGACTGAGGATGTACTTCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: VNFLDRLRSRFS*ISRLRMYFRIS
Trigger: GGAGATCCTGAAGTACATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCGGAGCCTGTCCAGGAAGTTCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGGGTGGGACTGTGGCTaGGGCGGCGGGAAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPGWDCG*GGGKLS
Trigger: TGAGAGCTTCCCGCCGCCTCAGCCACAGTCCCACCC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCAGGGTGGGACTGTGGCTaGGGCGGCGGGAAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LTAEFQDDIDRAAAISASGWDCG*GGGKLS
Trigger: TGAGAGCTTCCCGCCGCCTCAGCCACAGTCCCACCC...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576742.6
CDS-3UTR TCA 90 bp GTGCATGAGGAAGTCAGGCACATCCTCATCATGGCGCCGCCTGCAAAGCTCCTGCCTTGGTGTTGGGGTTaGTGTTTAACAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VHEEVRHILIMAPPAKLLPWCWG*CLTRPS
Trigger: TGAAGGCCTTGTTAAACATCAACCCCAACACCAAGG...CAGGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCCTGACTTCCTCATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCAGTTGGTACTTGGGGTTaGAGAAGGCCCCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: GFRFYTEVSGNSSTSSNAVGTWG*RRPPWR
Trigger: ACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAAC...TGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCGTGAGTCCCGCGAGGTaGTGTCCGTCTGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SLRKETCVFHSVHFTSLIVSPAR*CPSARA
Trigger: AGCACGAGCAGACGGACATCACCTCGCGGGACTCAC...GATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCACGGTCACCAGGGCGTaGAGGATGTTGTTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLTVTRA*RMLLPR
Trigger: ACGAGGCAACAACATCCTTCACGCCCTGGTGACCGT...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: SYRPRVFVKEGDVRLPFSSHSAS*SPRPRS
Trigger: TGACCGTGGCCGAGGACTTCAAGACGCAGAATGACT...ACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACCAGCTGCAGCGGCGTaGGGCCATCGTTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRPAAAA*GHRCCE
Trigger: CTCGCAACAACGATGGCCTCACGCCGCTGCAGCTGG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAGTGATTTCCAGCACTaGGTTGTCCGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGSDFQH*VVRGGV
Trigger: GACACCACCACGGACAACTCAGTGCTGGAAATCACT...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp AAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCTGCACATGGCCCAGATaGGCACAAACATCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: KSSSATLHSSPIRNLLLSCTWPR*AQTSSL
Trigger: TAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCA...GCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACCAGCACTGCGTCGCTaGAGCTGCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRPALRR*SCRRSC
Trigger: GCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTTCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 4 (lower is better)
Translates to: HPRPLCTALPSGICSSAISTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp GGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCTCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 4 (lower is better)
Translates to: GPGSSLRKETCVFHSVHFSTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...GAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGCCCACTCAGACAAATTaGCAACTGCCCCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRPTQTN*QLPLSS
Trigger: TGAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGG...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp CTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCAAACATCTCTCAGCTTaGGACAGTTTGAACCTTGGG +
Preference number: 4 (lower is better)
Translates to: LGQQSRTPPSLKASLHRVKHLSA*DSLNLG
Trigger: CCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTT...GACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTAAACATCTCTCAGCTTaGGACAGTTTGAACCTTGGG +
Preference number: 4 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSKHLSA*DSLNLG
Trigger: CCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTT...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp CTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCTGCTCCTTTTCACTCTaGTGCTTCTTGACTTATGGC +
Preference number: 4 (lower is better)
Translates to: LGQQSRTPPSLKASLHRVCSFSL*CFLTYG
Trigger: GCCATAAGTCAAGAAGCATCAGAGTGAAAAGGAGCA...GACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCCTCTGGGCGTAAAATaGAGGAAGTGCTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: KGSGRVFPERIPLLPQDIPLGVK*RKCSFS
Trigger: TGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGG...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCTATGACCTTCCTGCATaGCTTTGCCCAAGTACACAT +
Preference number: 4 (lower is better)
Translates to: CEVRTRKRARTFHPDRGGYDLPA*LCPSTH
Trigger: ATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATA...GCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGCTCCAGGAAGAAGTGTaGACTCTTCTTTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRLQEEV*TLLCGG
Trigger: ACCCCCACAAAGAAGAGTGCACACTTCTTCCTGGAG...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR GCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGCTGCGATGTCCCCCTaGCGCCGCTCGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPAAMSP*RRSMAM
Trigger: CATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACTGGTTGGTGCATGCTaGCAGGGCCAGGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRLVGAC*QGQGRL
Trigger: GAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp GTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACACAGTCGGAAATCACTGGTTGGTGCATGCTaGCAGGGCCAGGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: VFHSVHFTSLIRKHSRKSLVGAC*QGQGRL
Trigger: GAGACGCCCCTGGCCCTGGCAGCATGCACCAACCAG...TGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACACAGTCGGAAATCATCTCGGGCTGGTTGGTaGATGCTGCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VFHSVHFTSLIRKHSRKSSRAGW*MLPGPG
Trigger: CCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGA...TGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAATGCTCCATCAGCAGCTaGACAATCTCGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKCSISS*TISGWL
Trigger: CAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCA...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCTGCTCCATCAGCAGCTaGACAATCTCGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: IRKHSRKSSSATLHSSPICSISS*TISGWL
Trigger: CAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCA...GATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAGGATCATGTCGTACATaGGCTTCACAAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQGSCRT*ASQSHS
Trigger: AGAATGACTTTGTGAAGCGCATGTACGACATGATCC...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCTTCTTCCACTTCATATaGAGCAGCGTGTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SISPSQADLQLVKPEASPFFHFI*SSVCSG
Trigger: GCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAA...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCTTCCACTTCATATaGAGCAGCGTGTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: CSSYRPRVFVKEGDVRLPFFHFI*SSVCSG
Trigger: GCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAA...TGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCTTCTTCCACTTCATATaGAGCAGCGTGTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: KTKWNQASERMDCRSEGLFFHFI*SSVCSG
Trigger: GCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAA...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CTTCTTGACTTATGGCTTCCCTTGGTAAACCTACCTAGGCTCAGACGTTTTGGCAGCCACCCCATCTTGTaGGTCAGGGCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LLDLWLPLVNLPRLRRFGSHPIL*VRAKGC
Trigger: GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCT...GCCAAAACGTCTGAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLILPRS*SHPILC
Trigger: GCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATCCGAGAGGATGGACTaGAGATCCGAGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSSERMD*RSEGLS
Trigger: GCTGAGACCCTCGGATCTGCAGTCCATCCTCTCGGA...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp ACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TPALGSASTPRFPGIPRLSCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...AAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAAGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKEEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGGGATACTTGGAGTTCTaGTGGATGTTCAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGGYLEF*WMFRSP
Trigger: GGGTGACCTGAACATCCAGCAGAACTCCAAGTATCC...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATGATTTTGTTGAAATCTaGTGTTCGTCTTACAGGCCC +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDDFVEI*CSSYRP
Trigger: GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATC...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTACTCGACTTCTTCAAATaGATTGAGAGTGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVLDFFK*IESGFA
Trigger: AGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAG...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCCTCGACTTCTTCAAATaGATTGAGAGTGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GKEPGPFTQIAAAQQDLPLDFFK*IESGFA
Trigger: AGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAG...GGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCACCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 4 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCAGACAAATTGACAACTaGCCCTCAGTTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLRQIDN*PSVQTP
Trigger: GGGTGTCTGAACTGAGGGGCAGTTGTCAATTTGTCT...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCAGCAGCTGCTATTTCTaGTTCAGCGAAAGCCACGAT +
Preference number: 4 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLSSCYF*FSESHD
Trigger: ATCGTGGCTTTCGCTGAAGCAGAAATAGCAGCTGCT...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGTATCGATCGAGCAGCTaGTATTTCTGCTTCAGCGAA +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQYRSSS*YFCFSE
Trigger: TTCGCTGAAGCAGAAATAGCAGCTGCTCGATCGATA...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GCAGAGAAACTGGCCCAGAGTGCACTGCTAGGCCCCGACTCTTCAGTTTGCCTCCCCGACTCTTCAGTTTaGCTCAAGCCAGATGAACTT +
Preference number: 4 (lower is better)
Translates to: AEKLAQSALLGPDSSVCLPDSSV*LKPDEL
Trigger: AAGTTCATCTGGCTTGAGGCAAACTGAAGAGTCGGG...GAGGCAAACTGAAGAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TTCATCAGGCAGGTCTTCCCCGTGTCGGAGGCCGTCAGCTTGTGCATGAGGAAGTGGCAACTGTGGGGTTaGGTTCAAACCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: FIRQVFPVSEAVSLCMRKWQLWG*VQTLLS
Trigger: AGATAGAAGGGTTTGAACCCAACCCCACAGTTGCCA...CTTCCTCATGCACAAGCTGACGGCCTCCGACACGGGGAAGACCTGCCTGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp ATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCAAGGTCTTGGCAACTGTaGGGTTGGGTTCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: IILGHFAQLSHPESAPQPRSWQL*GWVQTL
Trigger: AAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCT...TGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGGATGTTGGAATCCATaGGCTTGGAGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: SSATLHSSPIRNLLLSHSGCWNP*AWRRQE
Trigger: CTCCTGTCTTCTCCAAGCCCATGGATTCCAACATCC...AGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGATGCACTGCCGGATGTTaGAATCCATGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRCTAGC*NPWAWR
Trigger: TCTCCAAGCCCATGGATTCCAACATCCGGCAGTGCA...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp ATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGGCTGTTGGGATTGGATaGGGTCTCTGTCACATCATC +
Preference number: 4 (lower is better)
Translates to: ISPSQADLQLVKPEASPGAVGIG*GLCHII
Trigger: GATGATGTGACAGAGACCCCATCCAATCCCAACAGC...CCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACCTGCCGCCGCTCGATaGCGATGTTCAGCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRPAAAR*RCSAPS
Trigger: AGACGGCGCTGAACATCGCCATCGAGCGGCGGCAGG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp GGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGAAAGAACATGTGCTTaGCAAACTTCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: GKEPGPFTQIAAAQQDLPERTCA*QTSSTS
Trigger: TGAAGTGGAAGAAGTTTGCCAAGCACATGTTCTTTC...GGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAATGCAAAATGACCTTCTaGATCATGACGCTGTACATG +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQCKMTF*IMTLYM
Trigger: CATGTACAGCGTCATGATCCAGAAGGTCATTTTGCA...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGCAAAATGACCTTCTaGATCATGACGCTGTACATG +
Preference number: 4 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRCKMTF*IMTLYM
Trigger: CATGTACAGCGTCATGATCCAGAAGGTCATTTTGCA...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCAGTCCTTGTTGTCTTTaGGACACTTCTCGATCAGCG +
Preference number: 4 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTSPCCL*DTSRSA
Trigger: CGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACT...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGTACTTGGAGTTCTGCTaGATGTTCAGGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRYLEFC*MFRSPR
Trigger: CCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTA...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCACACAGAGTGGCCCAGTACTTGGAGTTCTGCTaGATGTTCAGGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: QGHKVSICPASLAHRVAQYLEFC*MFRSPR
Trigger: CCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTA...CTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TGCAGCGGCGTGAGGCCATCGTTGTTGCGAGTGGTCTCCAGCTCCCAGTTGCCAAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: CSGVRPSLLRVVSSSQLPREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...TGGCAACTGGGAGCTGGAGACCACTCGCAACAACGATGGCCTCACGCCGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTTTTGCTGTTGTTCCTaGAAGAATCTTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: TESVTPPAAPDSARAHQLFCCCS*KNLGFC
Trigger: ACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAA...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCATTTTGCTGTTGTTCCTaGAAGAATCTTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: PLCTESVTPPAAPDSARAFCCCS*KNLGFC
Trigger: ACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAA...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp AAGAGAATGGGATACTTGGAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGCGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGA +
Preference number: 4 (lower is better)
Translates to: KRMGYLEFCWMFRSPRPMRAHQL*VPLLHR
Trigger: TCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCG...CATAGGCCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp AGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAGGTTTACACCAGCTGTTTAGACAGTTTGAACCTTaGGGTGTCAGGGGACGTTCA +
Preference number: 4 (lower is better)
Translates to: RRLPGSRLLLAVGLHQLFRQFEP*GVRGRS
Trigger: TGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCT...AAACAGCTGGTGTAAACCTACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp TCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTATAACGGCGGCAGAGTaGATTTTCTGGTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: SPSQADLQLVKPEASPGTITAAE*IFWWFR
Trigger: CCGAAACCACCAGAAAATCCACTCTGCCGCCGTTAT...AGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCAGTCTGGCACACAGAGTaGCCCAGGGCAGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: GFRFYTEVSGNSSTSSNAVWHTE*PRAEKL
Trigger: CAGTTTCTCTGCCCTGGGCCACTCTGTGTGCCAGAC...TGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CCA 90 bp GCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGCACTTGGACAAAAGCTaGCAGGTTAGGCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: ASRAGLHHPSKPLCTESVHLDKS*QVRQIE
Trigger: TTCTATTTGCCTAACCTGCCAGCTTTTGTCCAAGTG...CACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTCTCCATTCCCCACTTaGACAAAAGCTGGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPASPFPT*TKAGRL
Trigger: TAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGA...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACATGCTTCTTGACTTATaGCTTCCCTTGGTAAACCTA +
Preference number: 4 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHMLLDL*LPLVNL
Trigger: TAGGTTTACCAAGGGAAGCCATAAGTCAAGAAGCAT...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTTGGCATCATGAATCCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCGTGAGTCCCGCGAGGTaGTGTCCGTCTGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: LGIMNPNHFLSDQDVCSGVSPAR*CPSARA
Trigger: AGCACGAGCAGACGGACATCACCTCGCGGGACTCAC...GCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGGATTCATGATGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACACGGTCACCAGGGCGTaGAGGATGTTGTTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYTVTRA*RMLLPR
Trigger: ACGAGGCAACAACATCCTTCACGCCCTGGTGACCGT...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAACGGTCACCAGGGCGTaGAGGATGTTGTTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LLSLGHFSISEAKATPNPTVTRA*RMLLPR
Trigger: ACGAGGCAACAACATCCTTCACGCCCTGGTGACCGT...TGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTGGTGTTGTAGACAGTaGTTTCCAGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPAWCCRQ*FPALSC
Trigger: ACAACTCAGTGCTGGAAATCACTGTCTACAACACCA...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCTGGTGTTGTAGACAGTaGTTTCCAGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFWCCRQ*FPALSC
Trigger: ACAACTCAGTGCTGGAAATCACTGTCTACAACACCA...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTAGACGAGGGTCAGGGTaGTGTTGTAGAAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: TRKRARTFHPDRGGPAGLRRGSG*CCRRNK
Trigger: TTTATTTCTTCTACAACATCACCCTGACCCTCGTCT...AAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CAGGAGGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCAAGACGAGGGTCAGGGTaGTGTTGTAGAAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: QEERLLSLLLKTAAPFPPRRGSG*CCRRNK
Trigger: TTTATTTCTTCTACAACATCACCCTGACCCTCGTCT...TGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGCCAGCACTGCGTCGCTaGAGCTGCCGTAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMPALRR*SCRRSC
Trigger: GCAGCTCCTACGGCAGCTTCAGCGACGCAGTGCTGG...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCTCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 4 (lower is better)
Translates to: SISPSQADLQLVKPEASPSTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp GTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCTCTGCACAGAGTCGGTaGCTCCGCCTGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: VPGRILDFVEICCSSYRPSAQSR*LRLQRQ
Trigger: CTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGA...GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCAAACATCTCTCAGCTTaGGACAGTTTGAACCTTGGG +
Preference number: 4 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLKHLSA*DSLNLG
Trigger: CCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTT...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCATTGCTCTGGGCACCCTaGGGCCAAATATATAATACT +
Preference number: 4 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSLLWAP*GQIYNT
Trigger: AGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAA...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATTTGCTCTGGGCACCCTaGGGCCAAATATATAATACT +
Preference number: 4 (lower is better)
Translates to: GKTPLPAPQDCCPFPAIHLLWAP*GQIYNT
Trigger: AGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAA...ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGGGCTGCTGTGGATTGTaGAGCCTCACACACCCCAGC +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMGCCGL*SLTHPS
Trigger: GCTGGGGTGTGTGAGGCTTCACAATCCACAGCAGCC...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp AGCCTCCACAGCTCTGATATGACCTTCCTGCATGACTTTGCCCAAGTACACATTGGCTGCTGTGGATTGTaGAGCCTCACACACCCCAGC +
Preference number: 4 (lower is better)
Translates to: SLHSSDMTFLHDFAQVHIGCCGL*SLTHPS
Trigger: GCTGGGGTGTGTGAGGCTTCACAATCCACAGCAGCC...AATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAGTTGCTGGATTCTGTTaGGCCAAAATCTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQVAGFC*AKIFLN
Trigger: ATTGAGAAAGATTTTGGCTCAACAGAATCCAGCAAC...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGCCAGATGTGGAATGCTaGTTTGTACAATCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRPDVEC*FVQSPG
Trigger: GCCTGGAGATTGTACAAATCAGCATTCCACATCTGG...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTGCTCCTTTTCACTCTaGTGCTTCTTGACTTATGGC +
Preference number: 4 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPACSFSL*CFLTYG
Trigger: GCCATAAGTCAAGAAGCATCAGAGTGAAAAGGAGCA...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTTGCTCCTTTTCACTCTaGTGCTTCTTGACTTATGGC +
Preference number: 4 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISCSFSL*CFLTYG
Trigger: GCCATAAGTCAAGAAGCATCAGAGTGAAAAGGAGCA...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CCCAATCGGCCCCATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCACCTCTGGGCGTAAAATaGAGGAAGTGCTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PNRPHQGHKVSICPASLAPLGVK*RKCSFS
Trigger: TGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGG...TGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGATGGGGCCGATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTACCAGAGATGCACTaGCGGATGTTGGAATCCATG +
Preference number: 4 (lower is better)
Translates to: IILGHFAQLSHPESAPQPLPEMH*RMLESM
Trigger: CATGGATTCCAACATCCGGCAGTGCATCTCTGGTAA...TGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp TTTTTACATGAATCCTTTCACCAGATAACGGCGGCAGAGTGGATTTTCTGGTGGTCTCGGGCTGGTTGGTaGATGCTGCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FLHESFHQITAAEWIFWWSRAGW*MLPGPG
Trigger: CCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGA...CCACCAGAAAATCCACTCTGCCGCCGTTATCTGGTGAAAGGATTCATGTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATGCTCCATCAGCAGCTaGACAATCTCGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSCSISS*TISGWL
Trigger: CAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCA...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp AGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTGCGTCGCTGAAGTTCACAAAGTCATTCTaGGTCTTGAAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RSPRPMVSLKSSSTASLKFTKSF*VLKSSA
Trigger: GGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAA...CTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp AGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAAGGATCATGTCGTACATaGGCTTCACAAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: SLPPSPAHSGMGSRVSHKGSCRT*ASQSHS
Trigger: AGAATGACTTTGTGAAGCGCATGTACGACATGATCC...TTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATCTCCAGCTCCCAGTTaGCACTCCGCAGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSSPAPS*HSAVGS
Trigger: TGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGA...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGTCAGGATCTCCGCCTTaGCCATCTTGGCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMSGSPP*PSWRPA
Trigger: AGCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGA...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGATATGCAGCAGCGTGTaGAGCGGCTCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMICSSV*SGSRVS
Trigger: GCTGACCCTGGAGCCGCTGCACACGCTGCTGCATAT...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGGATACTTGGAGTTCTaGTGGATGTTCAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRGYLEF*WMFRSP
Trigger: GGGTGACCTGAACATCCAGCAGAACTCCAAGTATCC...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp ACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTGGATACTTGGAGTTCTaGTGGATGTTCAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: TPALGSASTPRFPGIPRLGYLEF*WMFRSP
Trigger: GGGTGACCTGAACATCCAGCAGAACTCCAAGTATCC...AAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp AGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTGCGTCGCTGAAGTTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: RSPRPMVSLKSSSTASLKLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...CTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCCTCGACTTCTTCAAATaGATTGAGAGTGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: QTAHAHTSSGFRFYTEVSLDFFK*IESGFA
Trigger: AGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAG...GGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGCACAGCGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 4 (lower is better)
Translates to: VLFVGKQVQEDRQYHKHSVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...GCTGTGCTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571139.5
CDS-3UTR GCA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 4 (lower is better)
Translates to: CLNISNIWSSCWILLSQNVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 4 (lower is better)
Translates to: LHSSPIRNLLLSHSGNIFPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...GAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGCCTGCTCCTCAAGACTaGTGCCCCTTTCCCGCCATC +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMPAPQD*CPFPAI
Trigger: GATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGG...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCAAAAGACTCCTCTCCCTaGTCCTCAAGACTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSKDSSP*SSRLLP
Trigger: GGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTT...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR GCA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACAATGTCTTTTCCGTATTaGAAGTTAAAACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ACSARQRTRTPALGSASTMSFPY*KLKPCV
Trigger: AACACAGGGTTTTAACTTGCAATACGGAAAAGACAT...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR GCA 90 bp CCCAATCGGCCCCATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCAAGCAGCTGCTATTTCTaGTTCAGCGAAAGCCACGAT +
Preference number: 4 (lower is better)
Translates to: PNRPHQGHKVSICPASLASSCYF*FSESHD
Trigger: ATCGTGGCTTTCGCTGAAGCAGAAATAGCAGCTGCT...TGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGATGGGGCCGATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CGCTACTGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCAGCAGCTGCTATTTCTaGTTCAGCGAAAGCCACGAT +
Preference number: 4 (lower is better)
Translates to: RYCEVRTRKRARTFHPDRSSCYF*FSESHD
Trigger: ATCGTGGCTTTCGCTGAAGCAGAAATAGCAGCTGCT...GCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACAGTAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATTATCGATCGAGCAGCTaGTATTTCTGCTTCAGCGAA +
Preference number: 4 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYYRSSS*YFCFSE
Trigger: TTCGCTGAAGCAGAAATAGCAGCTGCTCGATCGATA...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CTTCTTGACTTATGGCTTCCCTTGGTAAACCTACCTAGGCTCAGACGTTTTGGCGAAACTGGCCCAGAGTaGACTGCTAGGCCCCGACTC +
Preference number: 4 (lower is better)
Translates to: LLDLWLPLVNLPRLRRFGETGPE*TARPRL
Trigger: GAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTC...GCCAAAACGTCTGAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGAGATCACCGCATGTCTaGGGCCCAAGGCCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQRSPHV*GPRPPG
Trigger: ACCCGGGGGCCTTGGGCCCCAGACATGCGGTGATCT...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp CGCAGTAGGATCATGTCGTACATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGTCTTCTCTGGCAGGATaGCAGGGTTCCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: RSRIMSYMRFTKSFCVLKSSLAG*QGSHWG
Trigger: CCCCCAGTGGGAACCCTGCCATCCTGCCAGAGAAGA...CTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACATGATCCTACTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TCCCTATGGCTCTCCATTCCCCACTTGGACAAAAGCTGGCAGGTTAGGCAAATATGGCCAGCTGTGCACTaGGGCTGTTGGGATTGGATG +
Preference number: 4 (lower is better)
Translates to: SLWLSIPHLDKSWQVRQIWPAVH*GCWDWM
Trigger: CATCCAATCCCAACAGCCCCAGTGCACAGCTGGCCA...TATTTGCCTAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAGCCATAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CGCAGTAGGATCATGTCGTACATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGTCCTCTGCTCTTCCTTaGCCAGCTGTGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: RSRIMSYMRFTKSFCVLKSSALP*PAVHWG
Trigger: GCCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGA...CTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACATGATCCTACTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp ACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTTACTTGGAGTTCTGCTaGATGTTCAGGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: TPALGSASTPRFPGIPRLYLEFC*MFRSPR
Trigger: CCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTA...AAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp CACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: HAHTSSGFRFYTEVSGNSREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...GGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACAACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGGTCCTGGCTCGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGA +
Preference number: 4 (lower is better)
Translates to: LLLSHSGNIFSNSKMVLARAHQL*VPLLHR
Trigger: TCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCG...AGCCAGGACCATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCAGACAGTTTGAACCTTaGGGTGTCAGGGGACGTTCA +
Preference number: 4 (lower is better)
Translates to: SISPSQADLQLVKPEASPRQFEP*GVRGRS
Trigger: TGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCT...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACCAGCCCCGACCACTGTaGCTTAGAGCACGCGATTAC +
Preference number: 4 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYQPRPL*LRARDY
Trigger: GTAATCGCGTGCTCTAAGCCACAGTGGTCGGGGCTG...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATGAAAGCCTTTTGGGGTaGACACTGTTGGGAAGAATA +
Preference number: 4 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYESLLG*TLLGRI
Trigger: TATTCTTCCCAACAGTGTCCACCCCAAAAGGCTTTC...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AAGACAAAGTGGAACCAGGCATCCGAGAGGATGGACTGCAGATCCGAGGGTCTCTCTGGGAGGTCAAAGTaGGCAGATCAGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KTKWNQASERMDCRSEGLSGRSK*ADQLRS
Trigger: TGACCTCAACTGATCTGCCCACTTTGACCTCCCAGA...GAGACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCTGGTTCCACTTTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp GGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCAGTCCAGATTCAAAGCTaGGCTAGGCCAGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GFRFYTEVSGNSSTSSNAVQIQS*ARPGVV
Trigger: CACCACACCTGGCCTAGCCCAGCTTTGAATCTGGAC...TGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCTTAATGCGGGTAGCTGATGTTGTTGCCTCGTaGGTCCCGCGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: PNHFLSDQDVCSGLMRVADVVAS*VPRGDV
Trigger: GACATCACCTCGCGGGACTCACGAGGCAACAACATC...AGCTACCCGCATTAAGCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CCAAGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTGTCGTAGAGGGAGGATaGCACGGGTCCGTACGCCCA +
Preference number: 4 (lower is better)
Translates to: PSNKIQDVSHSDKLTTAPVVEGG*HGSVRP
Trigger: TGGGCGTACGGACCCGTGTCATCCTCCCTCTACGAC...AGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGTCGTAGAGGGAGGATaGCACGGGTCCGTACGCCCA +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPVVEGG*HGSVRP
Trigger: TGGGCGTACGGACCCGTGTCATCCTCCCTCTACGAC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CAGCCCTCAGACACGGCTGCAAAGATGCGCTTCTTCAGCCGCCTCTTTTTCCTCTGGTGTTGTAGACAGTaGTTTCCAGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: QPSDTAAKMRFFSRLFFLWCCRQ*FPALSC
Trigger: ACAACTCAGTGCTGGAAATCACTGTCTACAACACCA...GAGGAAAAAGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATAGACGAGGGTCAGGGTaGTGTTGTAGAAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYRRGSG*CCRRNK
Trigger: TTTATTTCTTCTACAACATCACCCTGACCCTCGTCT...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTAGACGAGGGTCAGGGTaGTGTTGTAGAAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISRRGSG*CCRRNK
Trigger: TTTATTTCTTCTACAACATCACCCTGACCCTCGTCT...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR TCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGAGACGAGGGTCAGGGTaGTGTTGTAGAAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILRRGSG*CCRRNK
Trigger: TTTATTTCTTCTACAACATCACCCTGACCCTCGTCT...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp TTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCACAGCTTGAGACAGTTTaGACCTTGGGGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLSLGHFSISEAKATPNPQLETV*TLGCQG
Trigger: CCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTG...TGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR TCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATTATCGCCATGTTATCTaGAGGCCAAATTTCTATTTC +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDYRHVI*RPNFYF
Trigger: GAAATAGAAATTTGGCCTTCAGATAACATGGCGATA...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCACCAGATGTGGAATGCTaGTTTGTACAATCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CSSYRPRVFVKEGDVRLPPDVEC*FVQSPG
Trigger: GCCTGGAGATTGTACAAATCAGCATTCCACATCTGG...TGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR TCA 90 bp TGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCACCTCTGGGCGTAAAATaGAGGAAGTGCTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CSSYRPRVFVKEGDVRLPPLGVK*RKCSFS
Trigger: TGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGG...TGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR TCA 90 bp AGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTGCGTCGCTGAAGTATGACCTTCCTGCATaGCTTTGCCCAAGTACACAT +
Preference number: 4 (lower is better)
Translates to: RSPRPMVSLKSSSTASLKYDLPA*LCPSTH
Trigger: ATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATA...CTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR TCA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAAGCCTTCTAAGAGCCTaGAGACTTCACAGTACAACC +
Preference number: 4 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGSLLRA*RLHSTT
Trigger: GGTTGTACTGTGAAGTCTTCAGGCTCTTAGAAGGCT...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR TCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAGCCTTCTAAGAGCCTaGAGACTTCACAGTACAACC +
Preference number: 4 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGSLLRA*RLHSTT
Trigger: GGTTGTACTGTGAAGTCTTCAGGCTCTTAGAAGGCT...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGGAACAAGTAGGTAAATaGGAATTTACAAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQEQVGK*EFTRIR
Trigger: CCGGATCCTTGTAAATTCTCATTTACCTACTTGTTC...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGATTACCAGAGATGCACTaGCGGATGTTGGAATCCATG +
Preference number: 4 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGLPEMH*RMLESM
Trigger: CATGGATTCCAACATCCGGCAGTGCATCTCTGGTAA...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACAACACGGCTGCAAAGATaGGCTTCTTCAGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTTRLQR*ASSAAS
Trigger: AGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGT...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACATCATGGCGCCGCCTaGAAAGCTCCTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRHHGAA*KAPAAP
Trigger: TGGAGCTGCAGGAGCTTTGCAGGCGGCGCCATGATG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTTCTCGGGCTGGTTGGTaGATGCTGCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISISRAGW*MLPGPG
Trigger: CCCTGGCCCTGGCAGCATGCACCAACCAGCCCGAGA...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp TGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCACAAAGTCATTCTaGGTCTTGAAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: CSSYRPRVFVKEGDVRLPFTKSF*VLKSSA
Trigger: GGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAA...TGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGATCAGGATCTCCGCCTTaGCCATCTTGGCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRSGSPP*PSWRPA
Trigger: AGCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGA...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAATATGCAGCAGCGTGTaGAGCGGCTCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRICSSV*SGSRVS
Trigger: GCTGACCCTGGAGCCGCTGCACACGCTGCTGCATAT...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGAGCCACCCCATCTTGTaGGTCAGGGCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQSHPIL*VRAKGC
Trigger: GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCT...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CCAAGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTAGCCACCCCATCTTGTaGGTCAGGGCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PSNKIQDVSHSDKLTTAPSHPIL*VRAKGC
Trigger: GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCT...AGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMILPRS*SHPILC
Trigger: GCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGTCTGCAGGCGCCAGATaGGTTCGCTCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMSAGAR*VRSPWR
Trigger: TCTCCAAGGAGAGCGAACGCATCTGGCGCCTGCAGA...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CGCAGTAGGATCATGTCGTACATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGCATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: RSRIMSYMRFTKSFCVLKHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...CTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACATGATCCTACTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCTTAATGCGGGTAGCTCATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: PNHFLSDQDVCSGLMRVAHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...AGCTACCCGCATTAAGCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCTTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SISPSQADLQLVKPEASPLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GCAGATCCGAGGGTCTCAGCAGGAAGATGGCAATGCCCTCTTTCACAGAGATGCTTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: ADPRVSAGRWQCPLSQRCLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGCTGAGACCCTCGGATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTCGACTTCTTCAAATaGATTGAGAGTGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQLDFFK*IESGFA
Trigger: AGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAG...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp GCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACGTCGGTGACTCCGCCTaGAGCGCCAGACAGCGCACG +
Preference number: 4 (lower is better)
Translates to: AVVPGRILDFVEICCSSYVGDSA*SARQRT
Trigger: CGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGAC...GTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCATGTCTTTTCCGTATTaGAAGTTAAAACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GKEPGPFTQIAAAQQDLPMSFPY*KLKPCV
Trigger: AACACAGGGTTTTAACTTGCAATACGGAAAAGACAT...GGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACCACCGCGCCCGGCCTaGATGATGTGTTTCTATGGC +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRPPRPA*MMCFYG
Trigger: GCCATAGAAACACATCATGCAGGCCGGGCGCGGTGG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp GTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCATGTTCAGCGCCGTCTaGCCTGAGCCCAGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VPGRILDFVEICCSSYRPMFSAV*PEPREV
Trigger: GACCTCCCTGGGCTCAGGGCAGACGGCGCTGAACAT...GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573539.5
CDS-3UTR CCA 90 bp TGCAGTCCTTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCGCTGTTGGGATTGGATaGGGTCTCTGTCACATCATC +
Preference number: 4 (lower is better)
Translates to: CSPCCLWDTSRSARPRLLAVGIG*GLCHII
Trigger: GATGATGTGACAGAGACCCCATCCAATCCCAACAGC...GAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGTGCAAAATGACCTTCTaGATCATGACGCTGTACATG +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILCKMTF*IMTLYM
Trigger: CATGTACAGCGTCATGATCCAGAAGGTCATTTTGCA...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAAGTCCTTGTTGTCTTTaGGACACTTCTCGATCAGCG +
Preference number: 4 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRSPCCL*DTSRSA
Trigger: CGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACT...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: KGSGRVFPERIPLLPQDIREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPAREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTATTTTGCTGTTGTTCCTaGAAGAATCTTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVFCCCS*KNLGFC
Trigger: ACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAA...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCCGTTCACTCCAAGGATaGTCTCCTTTTCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLRSLQG*SPFPRR
Trigger: CCTTCGGGGAAAAGGAGACCATCCTTGGAGTGAACG...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp GAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCGGTACTAAGACAAAGTaGAACCAGGCATCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: EFCWMFRSPRPMVSLKSSGTKTK*NQASER
Trigger: CCTCTCGGATGCCTGGTTCCACTTTGTCTTAGTACC...GGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000573539.5
CDS-3UTR CCA 90 bp AGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAGGTTTACACCAGCTGTTTAACATCTCCAACATCTaGAGCAGTTGCTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: RRLPGSRLLLAVGLHQLFNISNI*SSCWIL
Trigger: CAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTT...AAACAGCTGGTGTAAACCTACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCACACAGAGTGGCCCAGAACATCTCCAACATCTaGAGCAGTTGCTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: QGHKVSICPASLAHRVAQNISNI*SSCWIL
Trigger: CAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTT...CTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCACACAGAGTGGCCCAGGAAAGCCTTTTGGGGTaGACACTGTTGGGAAGAATA +
Preference number: 4 (lower is better)
Translates to: QGHKVSICPASLAHRVAQESLLG*TLLGRI
Trigger: TATTCTTCCCAACAGTGTCCACCCCAAAAGGCTTTC...CTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGATCAGGGAGACATCTGTaGTCCAAGAATCAGGACACT +
Preference number: 4 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRSGRHL*SKNQDT
Trigger: AGTGTCCTGATTCTTGGACCACAGATGTCTCCCTGA...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GGCGAGGTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGTGGCAACCCTTGCCCTaGGATCACCGCATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GEVLFVGKQVQEDRQYHKWQPLP*DHRMSG
Trigger: CCCAGACATGCGGTGATCTCAGGGCAAGGGTTGCCA...CTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTACCTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571139.5
CDS-3UTR TCA 90 bp CGCAGTAGGATCATGTCGTACATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGCAACTCTCTTGCCCATaGGAGGCACCATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RSRIMSYMRFTKSFCVLKQLSCP*EAPSPW
Trigger: CCAAGGAGATGGTGCCTCTCATGGGCAAGAGAGTTG...CTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACATGATCCTACTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGCACAGCGTGAGTCCCGCGAGGTaGTGTCCGTCTGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: VLFVGKQVQEDRQYHKHSVSPAR*CPSARA
Trigger: AGCACGAGCAGACGGACATCACCTCGCGGGACTCAC...GCTGTGCTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571139.5
CDS-3UTR TCA 90 bp TGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: WILLKSAVRLTGPGSSLRSHSAS*SPRPRS
Trigger: TGACCGTGGCCGAGGACTTCAAGACGCAGAATGACT...CCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp AAGAGAATGGGATACTTGGAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGAGTGATTTCCAGCACTaGGTTGTCCGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: KRMGYLEFCWMFRSPRPMSDFQH*VVRGGV
Trigger: GACACCACCACGGACAACTCAGTGCTGGAAATCACT...CATAGGCCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCAGACGAGGGTCAGGGTaGTGTTGTAGAAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFRRGSG*CCRRNK
Trigger: TTTATTTCTTCTACAACATCACCCTGACCCTCGTCT...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp TTAGCCTCTGGGCGTAAAATGAAGGAAGTGCTCCTTTTCACTCTGATGCTTCTTACACCCACTGAGCACTaGGCACGAGGGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LASGRKMKEVLLFTLMLLTPTEH*ARGCTL
Trigger: CAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGT...AAGAAGCATCAGAGTGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTGTTGCTGGATTCTGTTaGGCCAAAATCTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPAVAGFC*AKIFLN
Trigger: ATTGAGAAAGATTTTGGCTCAACAGAATCCAGCAAC...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTCTGGTGGTTTCGGCCCCAGTCACCTGGAAAATCCTTCCGTCTCCACTTCACCCCAAAACATGTGAGATaGCAAACATCCCTATGGCTC +
Preference number: 4 (lower is better)
Translates to: FWWFRPQSPGKSFRLHFTPKHVR*QTSLWL
Trigger: GAGCCATAGGGATGTTTGTCATCTCACATGTTTTGG...GGTGAAGTGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGAAACCACCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGTCCACAGCTCTGATATaGCCTTCCTGCATGACTTTG +
Preference number: 4 (lower is better)
Translates to: VLLDVQVTQAYGELEEFQSTALI*PSCMTL
Trigger: CAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGA...CTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR TCA 90 bp GTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAACAAGGGAGAATGGGGTaGCGATTCTGTGTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: VFGTLLDQRGQGYSKSKQQGRMG*RFCVWN
Trigger: GTTCCAAACACAGAATCGTCACCCCATTCTCCCTTG...TTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR GCA 90 bp CTTCTTGACTTATGGCTTCCCTTGGTAAACCTACCTAGGCTCAGACGTTTTGGCGCCCTCAGACACGGCTaGAAAGATGCGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LLDLWLPLVNLPRLRRFGALRHG*KDALLQ
Trigger: CTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGC...GCCAAAACGTCTGAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACGCCTGCAAAGCTCCTaGAGCTCCACCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRRLQSS*SSTSNS
Trigger: AGAGTTGCTGGTGGAGCTGCAGGAGCTTTGCAGGCG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGTGCTCCATCAGCAGCTaGACAATCTCGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMCSISS*TISGWL
Trigger: CAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCA...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCGGATCATGTCGTACATaGGCTTCACAAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFGSCRT*ASQSHS
Trigger: AGAATGACTTTGTGAAGCGCATGTACGACATGATCC...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp GTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCATATGCAGCAGCGTGTaGAGCGGCTCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VPGRILDFVEICCSSYRPICSSV*SGSRVS
Trigger: GCTGACCCTGGAGCCGCTGCACACGCTGCTGCATAT...GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LLHRGFREFLDFFKCIESILPRS*SHPILC
Trigger: GCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAATCCTCCCTAGGAGCTaGAGCCACCCCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRILPRS*SHPILC
Trigger: GCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp TTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LHSSPIRNLLLSHSGNIFSCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...GAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp TCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTTTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SYRPRVFVKEGDVRLPFSLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...ACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAATTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGGATTTTGTTGAAATCTaGTGTTCGTCTTACAGGCCC +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRDFVEI*CSSYRP
Trigger: GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATC...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATATGTCTTTTCCGTATTaGAAGTTAAAACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDMSFPY*KLKPCV
Trigger: AACACAGGGTTTTAACTTGCAATACGGAAAAGACAT...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATCGGCCCAGCAGGACTTaGCCGGAGTGTCTCATGCAG +
Preference number: 4 (lower is better)
Translates to: CLNISNIWSSCWILLSQNRPSRT*PECLMQ
Trigger: CTGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCG...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TTCTGGTGGTTTCGGCCCCAGTCACCTGGAAAATCCTTCCGTCTCCACTTCACCTGCGCAACCAGCTTCTaGTTAAACATCTCCAACATC +
Preference number: 4 (lower is better)
Translates to: FWWFRPQSPGKSFRLHFTCATSF*LNISNI
Trigger: GATGTTGGAGATGTTTAAGCAGAAGCTGGTTGCGCA...GGTGAAGTGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGAAACCACCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTACCATCTCCTTGGGGTaGGCTTTCATGGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LHRGFREFLDFFKCIESGTISLG*AFMAGE
Trigger: CTCACCAGCCATGAAAGCCCACCCCAAGGAGATGGT...ACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATGGCAGGGTTCCCACTaGGGGCAGCAACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPWQGSH*GQQLSC
Trigger: GCAAGAGAGTTGCTGCCCCCAGTGGGAACCCTGCCA...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACGCCGGCCTCTTCTCTaGCAGGATGGCAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQRRPLL*QDGRVP
Trigger: GGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCG...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp CTTCTTGACTTATGGCTTCCCTTGGTAAACCTACCTAGGCTCAGACGTTTTGGCCAGGAGGAGAGGTCTTaGCAACTGTGGGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LLDLWLPLVNLPRLRRFGQEERS*QLWGWV
Trigger: AACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTG...GCCAAAACGTCTGAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTGCACTGCCGGATGTTaGAATCCATGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LHSSPIRNLLLSHSGNIFCTAGC*NPWAWR
Trigger: TCTCCAAGCCCATGGATTCCAACATCCGGCAGTGCA...GAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGTGGGGCTGTTGGGATTaGATGGGGTCTCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: LLKSAVRLTGPGSSLRKEWGCWD*MGSLSH
Trigger: ATGTGACAGAGACCCCATCCAATCCCAACAGCCCCA...CTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGCAGATTTCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGATGGCCAGCTGTGCACTaGGGCTGTTGGGATTGGATG +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRWPAVH*GCWDWM
Trigger: CATCCAATCCCAACAGCCCCAGTGCACAGCTGGCCA...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATCCTCTGCTCTTCCTTaGCCAGCTGTGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPSSALP*PAVHWG
Trigger: GCCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGA...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp GGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTTTTGCTGTTGGCACATCCTCATCATaGCGCCGCCTGCAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GFREFLDFFKCIESGFAVGTSSS*RRLQSS
Trigger: GGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCC...AACAGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp ATGCGACTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGGCACATCCTCATCATaGCGCCGCCTGCAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: MRLTAEFQDDIDRAAAISGTSSS*RRLQSS
Trigger: GGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCC...AGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAGTCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCAATCTCGGGCTGGTTaGTGCATGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VPGRILDFVEICCSSYRPQSRAG*CMLPGP
Trigger: TGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTG...GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TCAATAATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCATGCACAATCTCGGGCTaGTTGGTGCATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SIIKGSLRLEPSKSLKTSCTISG*LVHAAR
Trigger: CCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCA...TGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTATTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGCATCGTTGTTGCGAGTaGTCTCCAGCTCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMHRCCE*SPAPSC
Trigger: GCAACTGGGAGCTGGAGACCACTCGCAACAACGATG...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCTTAATGCGGGTAGCTCATCGTTGTTGCGAGTaGTCTCCAGCTCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: PNHFLSDQDVCSGLMRVAHRCCE*SPAPSC
Trigger: GCAACTGGGAGCTGGAGACCACTCGCAACAACGATG...AGCTACCCGCATTAAGCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AAGCCTTCGTGTTGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGGAAAGAACATGTGCTTaGCAAACTTCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: KPSCWYLGLKKAPLACALERTCA*QTSSTS
Trigger: TGAAGTGGAAGAAGTTTGCCAAGCACATGTTCTTTC...CAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGGAAAGAACATGTGCTTaGCAAACTTCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: PRPLCTALPSGICSSAILERTCA*QTSSTS
Trigger: TGAAGTGGAAGAAGTTTGCCAAGCACATGTTCTTTC...CAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAAGGCATCCGAGAGGATaGACTGCAGATCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRRHPRG*TADPRV
Trigger: GACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCT...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp TCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTGCAAAATGACCTTCTaGATCATGACGCTGTACATG +
Preference number: 4 (lower is better)
Translates to: SPSQADLQLVKPEASPGTCKMTF*IMTLYM
Trigger: CATGTACAGCGTCATGATCCAGAAGGTCATTTTGCA...AGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGCCCTCAGACACGGCTGCAAAGATGCGCTTCTTCAGCCGCCTCTTTTTCCTCAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: QPSDTAAKMRFFSRLFFLREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...GAGGAAAAAGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TTCACCTCATTGATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACTCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FTSLIRKHSRKSSSATLHSQTPR*SWLSAG
Trigger: GCCTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...GTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCACGCGCACACCAGCTCTaGGTTCCGCTTCTACACCGA +
Preference number: 4 (lower is better)
Translates to: LTAEFQDDIDRAAAISASRAHQL*VPLLHR
Trigger: TCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCG...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCACACAGAGTGGCCCAGCACTTGGACAAAAGCTaGCAGGTTAGGCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: QGHKVSICPASLAHRVAQHLDKS*QVRQIE
Trigger: TTCTATTTGCCTAACCTGCCAGCTTTTGTCCAAGTG...CTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCTGGGGTGGACACTGTTaGGAAGAATATCCAATACAG +
Preference number: 4 (lower is better)
Translates to: LTGPGSSLRKETCVFHSVWGGHC*EEYPIQ
Trigger: CTGTATTGGATATTCTTCCCAACAGTGTCCACCCCA...GACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CCA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCATGCTTCTTGACTTATaGCTTCCCTTGGTAAACCTA +
Preference number: 4 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSMLLDL*LPLVNL
Trigger: TAGGTTTACCAAGGGAAGCCATAAGTCAAGAAGCAT...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GAGTCAAAGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATGGTCCAGATTCAAAGCTaGGCTAGGCCAGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: ESKQFWNSQLHSVELGIMVQIQS*ARPGVV
Trigger: CACCACACCTGGCCTAGCCCAGCTTTGAATCTGGAC...CATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCTTTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616411.4
3UTR CAA 72 bp GCAAGCAGGATCCGCACTATCTCCTTGGTGTTGGGGTaGATGTTTAACAAGGCCTTCATCAGGCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: ASRIRTISLVLG*MFNKAFIRQVF
Trigger: GAAGACCTGCCTGATGAAGGCCTTGTTAAACATCAACCCCAACACCAAGGAGATAGTGCGGATCCTGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CAA 72 bp GCAAAGGCAAGCAGGATCCGCACTATCTCCTTGGTGTaGGGGTTGATGTTTAACAAGGCCTTCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AKASRIRTISLV*GLMFNKAFIRQ
Trigger: CTGCCTGATGAAGGCCTTGTTAAACATCAACCCCAACACCAAGGAGATAGTGCGGATCCTGCTTGCCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTGGCTTTCATGGCTGGTaGGGTTCTGGGTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIGFHGW*GSGWSW
Trigger: CCACGACCACCCAGAACCTCACCAGCCATGAAAGCC...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACAACTCTCTTGCCCATaGGAGGCACCATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRQLSCP*EAPSPW
Trigger: CCAAGGAGATGGTGCCTCTCATGGGCAAGAGAGTTG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATCTTCTTTGTGGGGGTaGTCTCCGCCGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPSSLWG*SPPASS
Trigger: AGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGA...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCGTTGGTACTTGGGGTTaGAGAAGGCCCCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFVGTWG*RRPPWR
Trigger: ACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAAC...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAGTGAGTCCCGCGAGGTaGTGTCCGTCTGCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQVSPAR*CPSARA
Trigger: AGCACGAGCAGACGGACATCACCTCGCGGGACTCAC...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: LLHRGFREFLDFFKCIESSHSAS*SPRPRS
Trigger: TGACCGTGGCCGAGGACTTCAAGACGCAGAATGACT...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACATCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 4 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTSTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 4 (lower is better)
Translates to: LHSSPIRNLLLSHSGNIFSTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...GAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACCCCACTGAGACATACTaGGGTATGCGACTAACTGCT +
Preference number: 4 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYPTETY*GMRLTA
Trigger: AGCAGTTAGTCGCATACCTCAGTATGTCTCAGTGGG...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GCAGAGAAACTGGCCCAGAGTGCACTGCTAGGCCCCGACTCTTCAGTTTGCCTCTATCGCCATGTTATCTaGAGGCCAAATTTCTATTTC +
Preference number: 4 (lower is better)
Translates to: AEKLAQSALLGPDSSVCLYRHVI*RPNFYF
Trigger: GAAATAGAAATTTGGCCTTCAGATAACATGGCGATA...GAGGCAAACTGAAGAGTCGGGGCCTAGCAGTGCACTCTGGGCCAGTTTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TGCAGTCCTTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCCAAAACATGTGAGATaGCAAACATCCCTATGGCTC +
Preference number: 4 (lower is better)
Translates to: CSPCCLWDTSRSARPRLLPKHVR*QTSLWL
Trigger: GAGCCATAGGGATGTTTGTCATCTCACATGTTTTGG...GAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR GCA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCGGTCGTGGCAACCCTTaGCCTGAGATCACCGCATGT +
Preference number: 4 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFGRGNP*PEITAC
Trigger: ACATGCGGTGATCTCAGGGCAAGGGTTGCCACGACC...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR GCA 90 bp GTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCGGTCGTGGCAACCCTTaGCCTGAGATCACCGCATGT +
Preference number: 4 (lower is better)
Translates to: VPGRILDFVEICCSSYRPGRGNP*PEITAC
Trigger: ACATGCGGTGATCTCAGGGCAAGGGTTGCCACGACC...GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAACACGGCTGCAAAGATaGGCTTCTTCAGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRTRLQR*ASSAAS
Trigger: AGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGT...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp TTAGCCTCTGGGCGTAAAATGAAGGAAGTGCTCCTTTTCACTCTGATGCTTCTTCGCCTGCAAAGCTCCTaGAGCTCCACCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: LASGRKMKEVLLFTLMLLRLQSS*SSTSNS
Trigger: AGAGTTGCTGGTGGAGCTGCAGGAGCTTTGCAGGCG...AAGAAGCATCAGAGTGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CTTGGCATCATGAATCCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCATGTCCGTCTGCTCGTaGTCCATCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: LGIMNPNHFLSDQDVCSGMSVCS*SISSCT
Trigger: TGTGCAGCTGCTGATGGAGCACGAGCAGACGGACAT...GCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGGATTCATGATGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAAGCCACCCCATCTTGTaGGTCAGGGCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQSHPIL*VRAKGC
Trigger: GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCT...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAGAAGAGTTCCAGCACTaGGTCGCTGAAGCTGCCGTA +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDREEFQH*VAEAAV
Trigger: TACGGCAGCTTCAGCGACGCAGTGCTGGAACTCTTC...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATCTGCAGGCGCCAGATaGGTTCGCTCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPSAGAR*VRSPWR
Trigger: TCTCCAAGGAGAGCGAACGCATCTGGCGCCTGCAGA...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCTTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 4 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TTGAAATCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCAGACAAATTGACAACTaGCCCTCAGTTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: LKSVRLTGPGSSLRKETCRQIDN*PSVQTP
Trigger: GGGTGTCTGAACTGAGGGGCAGTTGTCAATTTGTCT...GCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGATTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATGGGGTGGGCTTTCATaGCTGGTGAGGTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPWGGLS*LVRFWV
Trigger: CACCCAGAACCTCACCAGCCATGAAAGCCCACCCCA...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTTCTTCTCTGGCAGGATaGCAGGGTTCCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISISSLAG*QGSHWG
Trigger: CCCCCAGTGGGAACCCTGCCATCCTGCCAGAGAAGA...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACAGGAGGAGAGGTCTTaGCAACTGTGGGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRQEERS*QLWGWV
Trigger: AACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCTGGCCAGCTGTGCACTaGGGCTGTTGGGATTGGATG +
Preference number: 4 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFWPAVH*GCWDWM
Trigger: CATCCAATCCCAACAGCCCCAGTGCACAGCTGGCCA...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGCGAGGTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGTGGCCAGCTGTGCACTaGGGCTGTTGGGATTGGATG +
Preference number: 4 (lower is better)
Translates to: GEVLFVGKQVQEDRQYHKWPAVH*GCWDWM
Trigger: CATCCAATCCCAACAGCCCCAGTGCACAGCTGGCCA...CTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTACCTCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571139.5
CDS-3UTR CCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATCTCGGGCTGGTTaGTGCATGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIQSRAG*CMLPGP
Trigger: TGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTG...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATGCACAATCTCGGGCTaGTTGGTGCATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPCTISG*LVHAAR
Trigger: CCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCA...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp GTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACACAGTCGGAAATCACATCGTTGTTGCGAGTaGTCTCCAGCTCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: VFHSVHFTSLIRKHSRKSHRCCE*SPAPSC
Trigger: GCAACTGGGAGCTGGAGACCACTCGCAACAACGATG...TGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTGAAAGAACATGTGCTTaGCAAACTTCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPERTCA*QTSSTS
Trigger: TGAAGTGGAAGAAGTTTGCCAAGCACATGTTCTTTC...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGAGGCATCCGAGAGGATaGACTGCAGATCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMRHPRG*TADPRV
Trigger: GACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCT...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACGCTGTACATGCCCATaGACTGGAAACCCCGCGTAT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRRCTCP*TGNPAY
Trigger: ATACGCGGGGTTTCCAGTCCATGGGCATGTACAGCG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGTGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAACTCCAAGATGGTCCTaGCTCTCTGCAGGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPTPRWS*LSAGAR
Trigger: TCTGGCGCCTGCAGAGAGCCAGGACCATCTTGGAGT...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp TCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCTCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLRKETCVFHSVHFTSLISQTPR*SWLSAG
Trigger: GCCTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...GATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp AGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTTTGCTGTTGTTCCTaGAAGAATCTTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: SLPPSPAHSGMGSRVSHKFCCCS*KNLGFC
Trigger: ACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAA...TTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp AGCCTCCACAGCTCTGATATGACCTTCCTGCATGACTTTGCCCAAGTACACATTGCAGAGTGGATTTTCTaGTGGTTTCGGCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SLHSSDMTFLHDFAQVHIAEWIF*WFRPQS
Trigger: TGACTGGGGCCGAAACCACCAGAAAATCCACTCTGC...AATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCAGGGCAGGGGCTGCTGTaGATTGTGAAGCCTCACACA +
Preference number: 4 (lower is better)
Translates to: LTAEFQDDIDRAAAISASGQGLL*IVKPHT
Trigger: TGTGTGAGGCTTCACAATCCACAGCAGCCCCTGCCC...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GTAAATGAGAATTTACAAGGATCCGGCACATTCAAGGGAGAATGGGGTGACGATCAGCCCCGACCACTGTaGCTTAGAGCACGCGATTAC +
Preference number: 4 (lower is better)
Translates to: VNENLQGSGTFKGEWGDDQPRPL*LRARDY
Trigger: GTAATCGCGTGCTCTAAGCCACAGTGGTCGGGGCTG...ATCGTCACCCCATTCTCCCTTGAATGTGCCGGATCCTTGTAAATTCTCATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CAA 72 bp CCATTTGACAGATGGGGAAAGTCAGGACCCTTAGACTaGATCTGCCCAAGGTTACATGGTCTGAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: PFDRWGKSGPLD*ICPRLHGLRQE
Trigger: CTCCTGTCTCAGACCATGTAACCTTGGGCAGATCAAGTCTAAGGGTCCTGACTTTCCCCATCTGTCAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCACCGTCAGCTTGTGCATaGGGAAGTCAGGCACATCCT +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPPSACA*GSQAHP
Trigger: AGGATGTGCCTGACTTCCTCATGCACAAGCTGACGG...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACACCTTGGTGTTGGGGTTaGTGTTTAACAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTPWCWG*CLTRPS
Trigger: TGAAGGCCTTGTTAAACATCAACCCCAACACCAAGG...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTGTTGGTACTTGGGGTTaGAGAAGGCCCCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIVGTWG*RRPPWR
Trigger: ACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAAC...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTGATGTTGTTGCCTCGTaGGTCCCGCGAGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIDVVAS*VPRGDV
Trigger: GACATCACCTCGCGGGACTCACGAGGCAACAACATC...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTACGGTCACCAGGGCGTaGAGGATGTTGTTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISITVTRA*RMLLPR
Trigger: ACGAGGCAACAACATCCTTCACGCCCTGGTGACCGT...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPSHSAS*SPRPRS
Trigger: TGACCGTGGCCGAGGACTTCAAGACGCAGAATGACT...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp ATGCGACTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTAGTCATTCTGCGTCTTaGAGTCCTCGGCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: MRLTAEFQDDIDRAAAISSHSAS*SPRPRS
Trigger: TGACCGTGGCCGAGGACTTCAAGACGCAGAATGACT...AGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAGTCGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTGTCGTAGAGGGAGGATaGCACGGGTCCGTACGCCCA +
Preference number: 4 (lower is better)
Translates to: FAVVPGRILDFVEICCSSVVEGG*HGSVRP
Trigger: TGGGCGTACGGACCCGTGTCATCCTCCCTCTACGAC...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp CCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCTTAATGCGGGTAGCTCAAGGGAGAATGGGGTaGCGATTCTGTGTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PNHFLSDQDVCSGLMRVAQGRMG*RFCVWN
Trigger: GTTCCAAACACAGAATCGTCACCCCATTCTCCCTTG...AGCTACCCGCATTAAGCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAGCGGGAAGCTCTCATTaGAGGCAGAGGGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQAGSSH*RQRDGW
Trigger: CCAGCCATCCCTCTGCCTGCAATGAGAGCTTCCCGC...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp TTCACCTCATTGATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACTTACCAGAGATGCACTaGCGGATGTTGGAATCCATG +
Preference number: 4 (lower is better)
Translates to: FTSLIRKHSRKSSSATLHLPEMH*RMLESM
Trigger: CATGGATTCCAACATCCGGCAGTGCATCTCTGGTAA...GTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGCCCTCAGACACGGCTaGAAAGATGCGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPALRHG*KDALLQ
Trigger: CTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGAGGCCGTCAGCTTGTaGATGAGGAAGTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPEAVSL*MRKSGT
Trigger: TGTGCCTGACTTCCTCATGCACAAGCTGACGGCCTC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp GTAAATGAGAATTTACAAGGATCCGGCACATTCAAGGGAGAATGGGGTGACGATGAGGCCGTCAGCTTGTaGATGAGGAAGTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: VNENLQGSGTFKGEWGDDEAVSL*MRKSGT
Trigger: TGTGCCTGACTTCCTCATGCACAAGCTGACGGCCTC...ATCGTCACCCCATTCTCCCTTGAATGTGCCGGATCCTTGTAAATTCTCATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTGAGGTGATGTCCGTCTaGTCGTGCTCCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIEVMSV*SCSISS
Trigger: GCTGCTGATGGAGCACGAGCAGACGGACATCACCTC...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp TTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGTTCACAAAGTCATTCTaGGTCTTGAAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LLKSAVRLTGPGSSLRKEFTKSF*VLKSSA
Trigger: GGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAA...CTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGCAGATTTCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR GCA 90 bp TCCCTATGGCTCTCCATTCCCCACTTGGACAAAAGCTGGCAGGTTAGGCAAATATTCACAAAGTCATTCTaGGTCTTGAAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SLWLSIPHLDKSWQVRQIFTKSF*VLKSSA
Trigger: GGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAA...TATTTGCCTAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAGCCATAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACACAGTCGGAAATCAAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VFHSVHFTSLIRKHSRKSSCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...TGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCATGTCTTTTCCGTATTaGAAGTTAAAACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFMSFPY*KLKPCV
Trigger: AACACAGGGTTTTAACTTGCAATACGGAAAAGACAT...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TCCCTATGGCTCTCCATTCCCCACTTGGACAAAAGCTGGCAGGTTAGGCAAATACCCGACTCTTCAGTTTaGCTCAAGCCAGATGAACTT +
Preference number: 4 (lower is better)
Translates to: SLWLSIPHLDKSWQVRQIPDSSV*LKPDEL
Trigger: AAGTTCATCTGGCTTGAGGCAAACTGAAGAGTCGGG...TATTTGCCTAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAGCCATAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp GGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATGCGCAACCAGCTTCTaGTTAAACATCTCCAACATC +
Preference number: 4 (lower is better)
Translates to: GFRFYTEVSGNSSTSSNACATSF*LNISNI
Trigger: GATGTTGGAGATGTTTAAGCAGAAGCTGGTTGCGCA...TGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CCA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCACCATCTCCTTGGGGTaGGCTTTCATGGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFTISLG*AFMAGE
Trigger: CTCACCAGCCATGAAAGCCCACCCCAAGGAGATGGT...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp GGCGAGGTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGACCATCTCCTTGGGGTaGGCTTTCATGGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GEVLFVGKQVQEDRQYHKTISLG*AFMAGE
Trigger: CTCACCAGCCATGAAAGCCCACCCCAAGGAGATGGT...CTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTACCTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571139.5
CDS-3UTR CCA 90 bp CCAAGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTACCATCTCCTTGGGGTaGGCTTTCATGGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PSNKIQDVSHSDKLTTAPTISLG*AFMAGE
Trigger: CTCACCAGCCATGAAAGCCCACCCCAAGGAGATGGT...AGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CCA 90 bp TTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCTGGCAGGGTTCCCACTaGGGGCAGCAACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LFLEESWILLKSAVRLTGWQGSH*GQQLSC
Trigger: GCAAGAGAGTTGCTGCCCCCAGTGGGAACCCTGCCA...GCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp GGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTTTTGCTGTTCAGGAGGAGAGGTCTTaGCAACTGTGGGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: GFREFLDFFKCIESGFAVQEERS*QLWGWV
Trigger: AACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTG...AACAGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp GAGTCAAAGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATGGGATGTTGGAATCCATaGGCTTGGAGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: ESKQFWNSQLHSVELGIMGCWNP*AWRRQE
Trigger: CTCCTGTCTTCTCCAAGCCCATGGATTCCAACATCC...CATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCTTTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGATGGGGCTGTTGGGATTaGATGGGGTCTCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRWGCWD*MGSLSH
Trigger: ATGTGACAGAGACCCCATCCAATCCCAACAGCCCCA...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAGGCACATCCTCATCATaGCGCCGCCTGCAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQGTSSS*RRLQSS
Trigger: GGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCC...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp GCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACCAATCTCGGGCTGGTTaGTGCATGCTGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AVVPGRILDFVEICCSSYQSRAG*CMLPGP
Trigger: TGGCCCTGGCAGCATGCACCAACCAGCCCGAGATTG...GTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGCATCGTTGTTGCGAGTaGTCTCCAGCTCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMHRCCE*SPAPSC
Trigger: GCAACTGGGAGCTGGAGACCACTCGCAACAACGATG...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCACATCGTTGTTGCGAGTaGTCTCCAGCTCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPHRCCE*SPAPSC
Trigger: GCAACTGGGAGCTGGAGACCACTCGCAACAACGATG...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp TCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: SYRPRVFVKEGDVRLPFSREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...ACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTTGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: LLHRGFREFLDFFKCIESCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGATGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGATCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRSQTPR*SWLSAG
Trigger: GCCTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp GTGCATGAGGAAGTCAGGCACATCCTCATCATGGCGCCGCCTGCAAAGCTCCTGTTTTGCTGTTGTTCCTaGAAGAATCTTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: VHEEVRHILIMAPPAKLLFCCCS*KNLGFC
Trigger: ACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAA...CAGGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCCTGACTTCCTCATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCAGACAGTTTGAACCTTaGGGTGTCAGGGGACGTTCA +
Preference number: 4 (lower is better)
Translates to: SLRKETCVFHSVHFTSLIRQFEP*GVRGRS
Trigger: TGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCT...GATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR CCA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATTCTGTCCAGCTAGTCTaGCACACAGAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CLNISNIWSSCWILLSQNSVQLV*HTEWPR
Trigger: CCTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGA...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GAGTCAAAGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATGTGGCTGAAAGCCTTTTaGGGTGGACACTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: ESKQFWNSQLHSVELGIMWLKAF*GGHCWE
Trigger: TTCCCAACAGTGTCCACCCCAAAAGGCTTTCAGCCA...CATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCTTTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCACTGCCCAAGGTTACATaGTCTGAGACAGGAGCGGAC +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPLPKVT*SETGAD
Trigger: GTCCGCTCCTGTCTCAGACCATGTAACCTTGGGCAG...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
3UTR CAA 72 bp TCTTCAGCAAAGGCAAGCAGGATCCGCACTATCTCCTaGGTGTTGGGGTTGATGTTTAACAAGGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SSAKASRIRTIS*VLGLMFNKAFI
Trigger: GATGAAGGCCTTGTTAAACATCAACCCCAACACCAAGGAGATAGTGCGGATCCTGCTTGCCTTTGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATGGTGTCCACGTTGGTaGGGTCGTAGAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQWCPRW*GRRGRM
Trigger: CATCCTCCCTCTACGACCTCACCAACGTGGACACCA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACATGGTGTTGTAGACAGTaGTTTCCAGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTWCCRQ*FPALSC
Trigger: ACAACTCAGTGCTGGAAATCACTGTCTACAACACCA...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATCAGCTTGAGACAGTTTaGACCTTGGGGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: CLNISNIWSSCWILLSQNQLETV*TLGCQG
Trigger: CCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTG...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGGTTAAATTCCCCCACTaGGACATACTGAGGTATGCG +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMVKFPH*DILRYA
Trigger: CGCATACCTCAGTATGTCTCAGTGGGGGAATTTAAC...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCGAACAAGTAGGTAAATaGGAATTTACAAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: IRKHSRKSSSATLHSSPIEQVGK*EFTRIR
Trigger: CCGGATCCTTGTAAATTCTCATTTACCTACTTGTTC...GATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR TCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCTGGTCTCAAACTCCTaGCCTCAGGTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISILVSNS*PQVIHP
Trigger: CGGGTGAATCACCTGAGGTCAGGAGTTTGAGACCAG...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTATGTCCGTCTGCTCGTaGTCCATCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIMSVCS*SISSCT
Trigger: TGTGCAGCTGCTGATGGAGCACGAGCAGACGGACAT...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTTCTCCAGCTCCCAGTTaGCACTCCGCAGTAGGATCA +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISISPAPS*HSAVGS
Trigger: TGATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGA...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp AAAAGCTTTTTGTCTTGCTCTGGGCACCCTGAGGCCAAATATATAATACTTACAATATGCAGCAGCGTGTaGAGCGGCTCCAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KSFLSCSGHPEAKYIILTICSSV*SGSRVS
Trigger: GCTGACCCTGGAGCCGCTGCACACGCTGCTGCATAT...TGTAAGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAAGACAAAAAGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TTTTTACATGAATCCTTTCACCAGATAACGGCGGCAGAGTGGATTTTCTGGTGGTTCTTCCACTTCATATaGAGCAGCGTGTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: FLHESFHQITAAEWIFWWFFHFI*SSVCSG
Trigger: GCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAA...CCACCAGAAAATCCACTCTGCCGCCGTTATCTGGTGAAAGGATTCATGTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATCCGAGAGGATGGACTaGAGATCCGAGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQSERMD*RSEGLS
Trigger: GCTGAGACCCTCGGATCTGCAGTCCATCCTCTCGGA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPSCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGAGCTGCCGTAGGAGCTaGAGTCCTTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQSCRRS*SPCCLW
Trigger: CCAAAGACAACAAGGACTGCAGCTCCTACGGCAGCT...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACATCCTCGGCCACTTTaGACAGCTCTCCCATCCGGA +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQHPRPL*TALPSG
Trigger: TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCAGATTTTGTTGAAATCTaGTGTTCGTCTTACAGGCCC +
Preference number: 4 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSDFVEI*CSSYRP
Trigger: GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATC...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCGATTTTGTTGAAATCTaGTGTTCGTCTTACAGGCCC +
Preference number: 4 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLDFVEI*CSSYRP
Trigger: GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATC...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp TCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCTCGACTTCTTCAAATaGATTGAGAGTGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SYRPRVFVKEGDVRLPFSLDFFK*IESGFA
Trigger: AGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAG...ACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp TTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCTCAAAGCCTCTCTaGACAGAGTCGGTGACTCCG +
Preference number: 4 (lower is better)
Translates to: LFLEESWILLKSAVRLTGPSKPL*TESVTP
Trigger: CGGAGTCACCGACTCTGTGCAGAGAGGCTTTGAGGG...GCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGAGACAAATTGACAACTaGCCCTCAGTTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMRQIDN*PSVQTP
Trigger: GGGTGTCTGAACTGAGGGGCAGTTGTCAATTTGTCT...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGATGTCTTTTCCGTATTaGAAGTTAAAACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRMSFPY*KLKPCV
Trigger: AACACAGGGTTTTAACTTGCAATACGGAAAAGACAT...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACAACATCTGGAGCAGTTaGTGGATTCTGTTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYNIWSS*WILLSQ
Trigger: TTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTT...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCTCGTCCTCCCAAAGTaGTGGGATTACAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISILVLPK*WDYRHE
Trigger: CTCGTGCCTGTAATCCCAGCACTTTGGGAGGACGAG...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATGGCTGGTGAGGTTCTaGGTGGTCGTGGCAACCCTT +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQWLVRF*VVVATL
Trigger: AAGGGTTGCCACGACCACCCAGAACCTCACCAGCCA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAAGGTCTTGGCAACTGTaGGGTTGGGTTCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRRSWQL*GWVQTL
Trigger: AAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCT...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp GGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTTTTGCTGTTTGGGGCTGTTGGGATTaGATGGGGTCTCTGTCACAT +
Preference number: 4 (lower is better)
Translates to: GFREFLDFFKCIESGFAVWGCWD*MGSLSH
Trigger: ATGTGACAGAGACCCCATCCAATCCCAACAGCCCCA...AACAGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCATGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: LTAEFQDDIDRAAAISASCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGCGTTCACTCCAAGGATaGTCTCCTTTTCCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQRSLQG*SPFPRR
Trigger: CCTTCGGGGAAAAGGAGACCATCCTTGGAGTGAACG...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCGCAGAGTGGATTTTCTaGTGGTTTCGGCCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFAEWIF*WFRPQS
Trigger: TGACTGGGGCCGAAACCACCAGAAAATCCACTCTGC...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TCCCTATGGCTCTCCATTCCCCACTTGGACAAAAGCTGGCAGGTTAGGCAAATATGGGGTGGACACTGTTaGGAAGAATATCCAATACAG +
Preference number: 4 (lower is better)
Translates to: SLWLSIPHLDKSWQVRQIWGGHC*EEYPIQ
Trigger: CTGTATTGGATATTCTTCCCAACAGTGTCCACCCCA...TATTTGCCTAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAGCCATAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CTTCTTGACTTATGGCTTCCCTTGGTAAACCTACCTAGGCTCAGACGTTTTGGCTCAGGGAGACATCTGTaGTCCAAGAATCAGGACACT +
Preference number: 4 (lower is better)
Translates to: LLDLWLPLVNLPRLRRFGSGRHL*SKNQDT
Trigger: AGTGTCCTGATTCTTGGACCACAGATGTCTCCCTGA...GCCAAAACGTCTGAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTCAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAAGCCTCTCGAGTAGCTaGGATTATAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPSLSSS*DYRHLP
Trigger: TGGCAGGTGCCTATAATCCCAGCTACTCGAGAGGCT...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTAGTGATTTCCAGCACTaGGTTGTCCGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISISDFQH*VVRGGV
Trigger: GACACCACCACGGACAACTCAGTGCTGGAAATCACT...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp TTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCAGACGAGGGTCAGGGTaGTGTTGTAGAAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: LHSSPIRNLLLSHSGNIFRRGSG*CCRRNK
Trigger: TTTATTTCTTCTACAACATCACCCTGACCCTCGTCT...GAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTTGCACATGGCCCAGATaGGCACAAACATCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISICTWPR*AQTSSL
Trigger: TAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCA...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTAAACATCTCTCAGCTTaGGACAGTTTGAACCTTGGG +
Preference number: 4 (lower is better)
Translates to: LHRGFREFLDFFKCIESGKHLSA*DSLNLG
Trigger: CCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTT...ACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR TCA 90 bp GAGTCAAAGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATGTGGAGCTTGGCATCATaGATCCAAACCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: ESKQFWNSQLHSVELGIMWSLAS*IQTTSF
Trigger: AAAGGAAGTGGTTTGGATTCATGATGCCAAGCTCCA...CATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCTTTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTTGGCATCATGAATCCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCAGCCTTCTAAGAGCCTaGAGACTTCACAGTACAACC +
Preference number: 4 (lower is better)
Translates to: LGIMNPNHFLSDQDVCSGSLLRA*RLHSTT
Trigger: GGTTGTACTGTGAAGTCTTCAGGCTCTTAGAAGGCT...GCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGGATTCATGATGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTCAAGCAATTCTCCTaGCTCAGCCTCTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPFKQFS*LSLSSS
Trigger: GCTACTCGAGAGGCTGAGTCAGGAGAATTGCTTGAA...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGCTCCAGGAAGAAGTGTaGACTCTTCTTTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQLQEEV*TLLCGG
Trigger: ACCCCCACAAAGAAGAGTGCACACTTCTTCCTGGAG...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR GCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATGCTCCATCAGCAGCTaGACAATCTCGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQCSISS*TISGWL
Trigger: CAACCAGCCCGAGATTGTGCAGCTGCTGATGGAGCA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CCAAGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTGCAGGAAGATGGCAATaGCCTCTTTCACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PSNKIQDVSHSDKLTTAPAGRWQ*PLSQRC
Trigger: GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGC...AGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR GCA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGGCAGGAAGATGGCAATaGCCTCTTTCACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMAGRWQ*PLSQRC
Trigger: GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGC...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp GGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTTTTGCTGTTGCAGGAAGATGGCAATaGCCTCTTTCACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: GFREFLDFFKCIESGFAVAGRWQ*PLSQRC
Trigger: GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGC...AACAGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGATTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp GAGTCAAAGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATGTATCGATCGAGCAGCTaGTATTTCTGCTTCAGCGAA +
Preference number: 4 (lower is better)
Translates to: ESKQFWNSQLHSVELGIMYRSSS*YFCFSE
Trigger: TTCGCTGAAGCAGAAATAGCAGCTGCTCGATCGATA...CATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCTTTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCTTAATGCGGGTAGCTTGCGCAACCAGCTTCTaGTTAAACATCTCCAACATC +
Preference number: 4 (lower is better)
Translates to: PNHFLSDQDVCSGLMRVACATSF*LNISNI
Trigger: GATGTTGGAGATGTTTAAGCAGAAGCTGGTTGCGCA...AGCTACCCGCATTAAGCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAACCATCTCCTTGGGGTaGGCTTTCATGGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQTISLG*AFMAGE
Trigger: CTCACCAGCCATGAAAGCCCACCCCAAGGAGATGGT...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGATGGCAACTGTGGGGTTaGGTTCAAACCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRWQLWG*VQTLLS
Trigger: AGATAGAAGGGTTTGAACCCAACCCCACAGTTGCCA...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp TCAATAATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCATGGCAACTGTGGGGTTaGGTTCAAACCCTTCTATCT +
Preference number: 4 (lower is better)
Translates to: SIIKGSLRLEPSKSLKTSWQLWG*VQTLLS
Trigger: AGATAGAAGGGTTTGAACCCAACCCCACAGTTGCCA...TGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTATTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCAAGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTAGGTCTTGGCAACTGTaGGGTTGGGTTCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: PSNKIQDVSHSDKLTTAPRSWQL*GWVQTL
Trigger: AAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCT...AGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTTGCACTGCCGGATGTTaGAATCCATGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISICTAGC*NPWAWR
Trigger: TCTCCAAGCCCATGGATTCCAACATCCGGCAGTGCA...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGCTGTTGGGATTGGATaGGGTCTCTGTCACATCATC +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPAVGIG*GLCHII
Trigger: GATGATGTGACAGAGACCCCATCCAATCCCAACAGC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGGCTGTTGGGATTGGATaGGGTCTCTGTCACATCATC +
Preference number: 4 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMAVGIG*GLCHII
Trigger: GATGATGTGACAGAGACCCCATCCAATCCCAACAGC...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTGCACAATCTCGGGCTaGTTGGTGCATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FAVVPGRILDFVEICCSSCTISG*LVHAAR
Trigger: CCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCA...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp AAAAGCTTTTTGTCTTGCTCTGGGCACCCTGAGGCCAAATATATAATACTTACATGCACAATCTCGGGCTaGTTGGTGCATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KSFLSCSGHPEAKYIILTCTISG*LVHAAR
Trigger: CCTGGCAGCATGCACCAACCAGCCCGAGATTGTGCA...TGTAAGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAAGACAAAAAGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTAGGCATCCGAGAGGATaGACTGCAGATCCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: FAVVPGRILDFVEICCSSRHPRG*TADPRV
Trigger: GACCCTCGGATCTGCAGTCCATCCTCTCGGATGCCT...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACATGCAAAATGACCTTCTaGATCATGACGCTGTACATG +
Preference number: 4 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTCKMTF*IMTLYM
Trigger: CATGTACAGCGTCATGATCCAGAAGGTCATTTTGCA...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp ACAGTGATTTCCAGCACTGAGTTGTCCGTGGTGGTGTCCACGTTGGTGAGGTCGTTTTGCTGTTGTTCCTaGAAGAATCTTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: TVISSTELSVVVSTLVRSFCCCS*KNLGFC
Trigger: ACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAA...CGACCTCACCAACGTGGACACCACCACGGACAACTCAGTGCTGGAAATCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGAGACAGTTTGAACCTTaGGGTGTCAGGGGACGTTCA +
Preference number: 4 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQRQFEP*GVRGRS
Trigger: TGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCT...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp TTAGCCTCTGGGCGTAAAATGAAGGAAGTGCTCCTTTTCACTCTGATGCTTCTTATAACGGCGGCAGAGTaGATTTTCTGGTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LASGRKMKEVLLFTLMLLITAAE*IFWWFR
Trigger: CCGAAACCACCAGAAAATCCACTCTGCCGCCGTTAT...AAGAAGCATCAGAGTGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGGAAAGCCTTTTGGGGTaGACACTGTTGGGAAGAATA +
Preference number: 4 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMESLLG*TLLGRI
Trigger: TATTCTTCCCAACAGTGTCCACCCCAAAAGGCTTTC...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCATGGCTGAAAGCCTTTTaGGGTGGACACTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LTAEFQDDIDRAAAISASWLKAF*GGHCWE
Trigger: TTCCCAACAGTGTCCACCCCAAAAGGCTTTCAGCCA...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CAA 72 bp ACCTACCTAGGCTCAGACGTTTTGGCTGAAAGCCTTTaGGGGTGGACACTGTTGGGAAGAATATCCAATACA +
Preference number: 4 (lower is better)
Translates to: TYLGSDVLAESL*GWTLLGRISNT
Trigger: TGTATTGGATATTCTTCCCAACAGTGTCCACCCCAAAAGGCTTTCAGCCAAAACGTCTGAGCCTAGGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
3UTR CAA 72 bp GTGGTTTTGCTGTTGTTCCTGGAAGAATCTTGGATTTaGTTGAAATCTGCTGTTCGTCTTACAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VVLLLFLEESWI*LKSAVRLTGPG
Trigger: CCCGGGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp CCAAGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCCTTGGTGTTGGGGTTaGTGTTTAACAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PSNKIQDVSHSDKLTTAPPWCWG*CLTRPS
Trigger: TGAAGGCCTTGTTAAACATCAACCCCAACACCAAGG...AGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCACCTTGGTGTTGGGGTTaGTGTTTAACAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LTAEFQDDIDRAAAISASPWCWG*CLTRPS
Trigger: TGAAGGCCTTGTTAAACATCAACCCCAACACCAAGG...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp GTAAATGAGAATTTACAAGGATCCGGCACATTCAAGGGAGAATGGGGTGACGATTCCACAGCTCTGATATaGCCTTCCTGCATGACTTTG +
Preference number: 4 (lower is better)
Translates to: VNENLQGSGTFKGEWGDDSTALI*PSCMTL
Trigger: CAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGA...ATCGTCACCCCATTCTCCCTTGAATGTGCCGGATCCTTGTAAATTCTCATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACGAACAAGTAGGTAAATaGGAATTTACAAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYEQVGK*EFTRIR
Trigger: CCGGATCCTTGTAAATTCTCATTTACCTACTTGTTC...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCTCCAGGAAGAAGTGTaGACTCTTCTTTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISILQEEV*TLLCGG
Trigger: ACCCCCACAAAGAAGAGTGCACACTTCTTCCTGGAG...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CTGGATACGGCTTTATCCATAACAGATACGGCTTTATCCATTAATGGATATGACATGTCCGTCTGCTCGTaGTCCATCAGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: LDTALSITDTALSINGYDMSVCS*SISSCT
Trigger: TGTGCAGCTGCTGATGGAGCACGAGCAGACGGACAT...GTCATATCCATTAATGGATAAAGCCGTATCTGTTATGGATAAAGCCGTATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATTCTTCCACTTCATATaGAGCAGCGTGTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQFFHFI*SSVCSG
Trigger: GCCGCTGCACACGCTGCTGCATATGAAGTGGAAGAA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTGCAGGAAGATGGCAATaGCCTCTTTCACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIAGRWQ*PLSQRC
Trigger: GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGC...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTGGATACTTGGAGTTCTaGTGGATGTTCAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIGYLEF*WMFRSP
Trigger: GGGTGACCTGAACATCCAGCAGAACTCCAAGTATCC...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCATTAAGGAAGGAGACGTaGGTCTTCCATTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LTAEFQDDIDRAAAISASLRKET*VFHSVH
Trigger: GTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAA...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCACTCGACTTCTTCAAATaGATTGAGAGTGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LLSLGHFSISEAKATPNPLDFFK*IESGFA
Trigger: AGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAG...TGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CCA 90 bp AGCCAGATGAACTTATCTATCGCCATGTTATCTGAAGGCCAAATTTCTATTTCTTGGGGTGGGCTTTCATaGCTGGTGAGGTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SQMNLSIAMLSEGQISISWGGLS*LVRFWV
Trigger: CACCCAGAACCTCACCAGCCATGAAAGCCCACCCCA...AGAAATAGAAATTTGGCCTTCAGATAACATGGCGATAGATAAGTTCATCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576742.6
CDS-3UTR CCA 90 bp TCCCTATGGCTCTCCATTCCCCACTTGGACAAAAGCTGGCAGGTTAGGCAAATAGAAAGAACATGTGCTTaGCAAACTTCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: SLWLSIPHLDKSWQVRQIERTCA*QTSSTS
Trigger: TGAAGTGGAAGAAGTTTGCCAAGCACATGTTCTTTC...TATTTGCCTAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAGCCATAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp TTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCTCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LFLEESWILLKSAVRLTGSQTPR*SWLSAG
Trigger: GCCTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...GCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTGTCCAGATTCAAAGCTaGGCTAGGCCAGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: FAVVPGRILDFVEICCSSVQIQS*ARPGVV
Trigger: CACCACACCTGGCCTAGCCCAGCTTTGAATCTGGAC...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp AAAAGCTTTTTGTCTTGCTCTGGGCACCCTGAGGCCAAATATATAATACTTACAAGTGATTTCCAGCACTaGGTTGTCCGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: KSFLSCSGHPEAKYIILTSDFQH*VVRGGV
Trigger: GACACCACCACGGACAACTCAGTGCTGGAAATCACT...TGTAAGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAAGACAAAAAGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTAGTGATTTCCAGCACTaGGTTGTCCGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: FAVVPGRILDFVEICCSSSDFQH*VVRGGV
Trigger: GACACCACCACGGACAACTCAGTGCTGGAAATCACT...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR TCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATGGTGTTGTAGACAGTaGTTTCCAGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPWCCRQ*FPALSC
Trigger: ACAACTCAGTGCTGGAAATCACTGTCTACAACACCA...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp ATGCGACTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTTGGTGTTGTAGACAGTaGTTTCCAGCACTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: MRLTAEFQDDIDRAAAISWCCRQ*FPALSC
Trigger: ACAACTCAGTGCTGGAAATCACTGTCTACAACACCA...AGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAGTCGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAAGACGAGGGTCAGGGTaGTGTTGTAGAAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRRRGSG*CCRRNK
Trigger: TTTATTTCTTCTACAACATCACCCTGACCCTCGTCT...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATCCACTTCACCTCATTaGTCCGCAAACACAGTCGGA +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQSTSPH*SANTVG
Trigger: TCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCATTGCTCTGGGCACCCTaGGGCCAAATATATAATACT +
Preference number: 4 (lower is better)
Translates to: LTAEFQDDIDRAAAISASLLWAP*GQIYNT
Trigger: AGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAA...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp TTAGCCTCTGGGCGTAAAATGAAGGAAGTGCTCCTTTTCACTCTGATGCTTCTTTTGCCTCAAGCCAGATaGACTTATCTATCGCCATGT +
Preference number: 4 (lower is better)
Translates to: LASGRKMKEVLLFTLMLLLPQAR*TYLSPC
Trigger: ACATGGCGATAGATAAGTTCATCTGGCTTGAGGCAA...AAGAAGCATCAGAGTGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAGGATCATGTCGTACATaGGCTTCACAAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRGSCRT*ASQSHS
Trigger: AGAATGACTTTGTGAAGCGCATGTACGACATGATCC...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAGGATGTTGGAATCCATaGGCTTGGAGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQGCWNP*AWRRQE
Trigger: CTCCTGTCTTCTCCAAGCCCATGGATTCCAACATCC...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGATGCAAAATGACCTTCTaGATCATGACGCTGTACATG +
Preference number: 4 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRCKMTF*IMTLYM
Trigger: CATGTACAGCGTCATGATCCAGAAGGTCATTTTGCA...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTAGTCCTTGTTGTCTTTaGGACACTTCTCGATCAGCG +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISISPCCL*DTSRSA
Trigger: CGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACT...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATACTTGGAGTTCTGCTaGATGTTCAGGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQYLEFC*MFRSPR
Trigger: CCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp AAAAGCTTTTTGTCTTGCTCTGGGCACCCTGAGGCCAAATATATAATACTTACATGCGTTCGCTCTCCTTaGAGACGTTCTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: KSFLSCSGHPEAKYIILTCVRSP*RRSPQS
Trigger: AGACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCA...TGTAAGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAAGACAAAAAGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTGGGGTGGACACTGTTaGGAAGAATATCCAATACAG +
Preference number: 4 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQWGGHC*EEYPIQ
Trigger: CTGTATTGGATATTCTTCCCAACAGTGTCCACCCCA...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCTCCCATTTGACAGATaGGGAAAGTCAGGACCCTTA +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISILPFDR*GKSGPL
Trigger: TAAGGGTCCTGACTTTCCCCATCTGTCAAATGGGAG...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp TTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCTCTGGGAGGTCAAAGTaGGCAGATCAGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LFLEESWILLKSAVRLTGSGRSK*ADQLRS
Trigger: TGACCTCAACTGATCTGCCCACTTTGACCTCCCAGA...GCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
3UTR CAA 72 bp CACTGTTGGGAAGAATATCCAATACAGAAAATGGTCTaGCCAACAAATTCCATCCAGACCCACAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: HCWEEYPIQKMV*PTNSIQTHRQQ
Trigger: CTGCTGTCTGTGGGTCTGGATGGAATTTGTTGGCAAGACCATTTTCTGTATTGGATATTCTTCCCAACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCTTGGTGTTGGGGTTaGTGTTTAACAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQPWCWG*CLTRPS
Trigger: TGAAGGCCTTGTTAAACATCAACCCCAACACCAAGG...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp AGCCAGATGAACTTATCTATCGCCATGTTATCTGAAGGCCAAATTTCTATTTCTTGCACATGGCCCAGATaGGCACAAACATCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: SQMNLSIAMLSEGQISISCTWPR*AQTSSL
Trigger: TAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCA...AGAAATAGAAATTTGGCCTTCAGATAACATGGCGATAGATAAGTTCATCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATTACCAGAGATGCACTaGCGGATGTTGGAATCCATG +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQLPEMH*RMLESM
Trigger: CATGGATTCCAACATCCGGCAGTGCATCTCTGGTAA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATTCACAAAGTCATTCTaGGTCTTGAAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQFTKSF*VLKSSA
Trigger: GGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR GCA 90 bp ATGCGACTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGGATCATGTCGTACATaGGCTTCACAAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: MRLTAEFQDDIDRAAAISGSCRT*ASQSHS
Trigger: AGAATGACTTTGTGAAGCGCATGTACGACATGATCC...AGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAGTCGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TTTTTACATGAATCCTTTCACCAGATAACGGCGGCAGAGTGGATTTTCTGGTGGGGATCATGTCGTACATaGGCTTCACAAAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: FLHESFHQITAAEWIFWWGSCRT*ASQSHS
Trigger: AGAATGACTTTGTGAAGCGCATGTACGACATGATCC...CCACCAGAAAATCCACTCTGCCGCCGTTATCTGGTGAAAGGATTCATGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp CTGGATACGGCTTTATCCATAACAGATACGGCTTTATCCATTAATGGATATGACGCAGGAAGATGGCAATaGCCTCTTTCACAGAGATGC +
Preference number: 4 (lower is better)
Translates to: LDTALSITDTALSINGYDAGRWQ*PLSQRC
Trigger: GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGC...GTCATATCCATTAATGGATAAAGCCGTATCTGTTATGGATAAAGCCGTATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp TTTGCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTGGATACTTGGAGTTCTaGTGGATGTTCAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: FAVVPGRILDFVEICCSSGYLEF*WMFRSP
Trigger: GGGTGACCTGAACATCCAGCAGAACTCCAAGTATCC...AGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp AAAAGCTTTTTGTCTTGCTCTGGGCACCCTGAGGCCAAATATATAATACTTACATACTTGGAGTTCTGCTaGATGTTCAGGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: KSFLSCSGHPEAKYIILTYLEFC*MFRSPR
Trigger: CCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTA...TGTAAGTATTATATATTTGGCCTCAGGGTGCCCAGAGCAAGACAAAAAGCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp ATGCGACTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTCACTTGGACAAAAGCTaGCAGGTTAGGCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: MRLTAEFQDDIDRAAAISHLDKS*QVRQIE
Trigger: TTCTATTTGCCTAACCTGCCAGCTTTTGTCCAAGTG...AGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAGTCGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CTGGATACGGCTTTATCCATAACAGATACGGCTTTATCCATTAATGGATATGACGTTAAATTCCCCCACTaGGACATACTGAGGTATGCG +
Preference number: 4 (lower is better)
Translates to: LDTALSITDTALSINGYDVKFPH*DILRYA
Trigger: CGCATACCTCAGTATGTCTCAGTGGGGGAATTTAAC...GTCATATCCATTAATGGATAAAGCCGTATCTGTTATGGATAAAGCCGTATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp CCAAGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTGTTGCTGGATTCTGTTaGGCCAAAATCTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: PSNKIQDVSHSDKLTTAPVAGFC*AKIFLN
Trigger: ATTGAGAAAGATTTTGGCTCAACAGAATCCAGCAAC...AGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR GCA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCCTCGACTTCTTCAAATaGATTGAGAGTGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFLDFFK*IESGFA
Trigger: AGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAG...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CCA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCAGAAAGAACATGTGCTTaGCAAACTTCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LTAEFQDDIDRAAAISASERTCA*QTSSTS
Trigger: TGAAGTGGAAGAAGTTTGCCAAGCACATGTTCTTTC...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCGAAAGAACATGTGCTTaGCAAACTTCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: VPGRILDFVEICCSSYRPERTCA*QTSSTS
Trigger: TGAAGTGGAAGAAGTTTGCCAAGCACATGTTCTTTC...GGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CCA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGAAAGAACATGTGCTTaGCAAACTTCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPERTCA*QTSSTS
Trigger: TGAAGTGGAAGAAGTTTGCCAAGCACATGTTCTTTC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CCA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATTGCAAAATGACCTTCTaGATCATGACGCTGTACATG +
Preference number: 4 (lower is better)
Translates to: CLNISNIWSSCWILLSQNCKMTF*IMTLYM
Trigger: CATGTACAGCGTCATGATCCAGAAGGTCATTTTGCA...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp ATGCGACTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTATGCTTCTTGACTTATaGCTTCCCTTGGTAAACCTA +
Preference number: 4 (lower is better)
Translates to: MRLTAEFQDDIDRAAAISMLLDL*LPLVNL
Trigger: TAGGTTTACCAAGGGAAGCCATAAGTCAAGAAGCAT...AGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAGTCGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCATGATGTGTTTCTATaGCTTAGGGCTACGCCATTT +
Preference number: 4 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIHDVFL*LRATPF
Trigger: AAATGGCGTAGCCCTAAGCCATAGAAACACATCATG...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp CTGGATACGGCTTTATCCATAACAGATACGGCTTTATCCATTAATGGATATGACCCAAAACATGTGAGATaGCAAACATCCCTATGGCTC +
Preference number: 4 (lower is better)
Translates to: LDTALSITDTALSINGYDPKHVR*QTSLWL
Trigger: GAGCCATAGGGATGTTTGTCATCTCACATGTTTTGG...GTCATATCCATTAATGGATAAAGCCGTATCTGTTATGGATAAAGCCGTATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAAGAGAATGGGATACTTaGAGTTCTGCTGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQREWDT*SSAGCS
Trigger: TGAACATCCAGCAGAACTCCAAGTATCCCATTCTCT...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR TCA 90 bp AGCCAGATGAACTTATCTATCGCCATGTTATCTGAAGGCCAAATTTCTATTTCTAAACATCTCTCAGCTTaGGACAGTTTGAACCTTGGG +
Preference number: 4 (lower is better)
Translates to: SQMNLSIAMLSEGQISISKHLSA*DSLNLG
Trigger: CCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTT...AGAAATAGAAATTTGGCCTTCAGATAACATGGCGATAGATAAGTTCATCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR TCA 90 bp AGCCAGATGAACTTATCTATCGCCATGTTATCTGAAGGCCAAATTTCTATTTCTTTGCCTCAAGCCAGATaGACTTATCTATCGCCATGT +
Preference number: 4 (lower is better)
Translates to: SQMNLSIAMLSEGQISISLPQAR*TYLSPC
Trigger: ACATGGCGATAGATAAGTTCATCTGGCTTGAGGCAA...AGAAATAGAAATTTGGCCTTCAGATAACATGGCGATAGATAAGTTCATCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CCA 90 bp GGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTTTTGCTGTTTTTTGCTGTTGTTCCTaGAAGAATCTTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: GFREFLDFFKCIESGFAVFCCCS*KNLGFC
Trigger: ACAAAATCCAAGATTCTTCCAGGAACAACAGCAAAA...AACAGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR TCA 90 bp AGCCAGATGAACTTATCTATCGCCATGTTATCTGAAGGCCAAATTTCTATTTCTTATCGCCATGTTATCTaGAGGCCAAATTTCTATTTC +
Preference number: 4 (lower is better)
Translates to: SQMNLSIAMLSEGQISISYRHVI*RPNFYF
Trigger: GAAATAGAAATTTGGCCTTCAGATAACATGGCGATA...AGAAATAGAAATTTGGCCTTCAGATAACATGGCGATAGATAAGTTCATCTGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGACGTCGGCGCCGTCCGCCTTGCCCATCTaGGCGGCCAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: WYLGLKKAPLACALTSAPSALPI*AASCSG
Trigger: GCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGGA...CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTATCCGCCTTGCCCATCTaGGCGGCCAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVSALPI*AASCSG
Trigger: GCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGGA...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCGCGGCCCAGCAGGACTaGCCCGGAGTGTCTCATGCA +
Preference number: 5 (lower is better)
Translates to: TESVTPPAAPDSARAHQLAAQQD*PGVSHA
Trigger: TGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCGC...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS TCA 90 bp ATCACCGCATGTCTGGGGCCCAAGGCCCCCGGGTGGGACTGTGGCTaGGGCGGCGGGAAGCTCTCATTGCAGGCAGAGGGATGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: ITACLGPKAPGWDCG*GGGKLSLQAEGWLE
Trigger: TTCCAGCCATCCCTCTGCCTGCAATGAGAGCTTCCCGCCGCCTCAGCCACAGTCCCACCCGGGGGCCTTGGGCCCCAGACATGCGGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574773.1
ENST00000576742.6
CDS-3UTR CAA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTGGGGCAGCAACTCTCTaGCCCATGAGAGGCACCATC +
Preference number: 5 (lower is better)
Translates to: DSACSARQRTRTPALGSAGAATL*PMRGTI
Trigger: GATGGTGCCTCTCATGGGCAAGAGAGTTGCTGCCCC...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
CDS-3UTR CAA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGTTCAGGATCTCCGCCTaGCCCATCTTGGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQFRISA*PILAAS
Trigger: GCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGAA...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CGGCCACGGTCACCAGGGCGTGAAGGATGTTGTTGCCTCGTGAGTCCCGCGAGGTGCAGCCACCCCATCTaGTGCGTCAGGGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: RPRSPGREGCCCLVSPARCSHPI*CVRAKG
Trigger: CCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCA...CCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS GCA 90 bp TGGGCTTTCATGGCTGGTGAGGTTCTGGGTGGTCGTGGCAACCCTTaGCCTGAGATCACCGCATGTCTGGGGCCCAAGGCCCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: WAFMAGEVLGGRGNP*PEITACLGPKAPGW
Trigger: CCACCCGGGGGCCTTGGGCCCCAGACATGCGGTGATCTCAGGGCAAGGGTTGCCACGACCACCCAGAACCTCACCAGCCATGAAAGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000572519.1
ENST00000573539.5
ENST00000574773.1
ENST00000576742.6
CDS-3UTR CAA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGGGGGCAGCAACTCTCTaGCCCATGAGAGGCACCATC +
Preference number: 5 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQGAATL*PMRGTI
Trigger: GATGGTGCCTCTCATGGGCAAGAGAGTTGCTGCCCC...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCGGGATGGCCTCGGGGCAGCAACTCTCTaGCCCATGAGAGGCACCATC +
Preference number: 5 (lower is better)
Translates to: ELQPPHLVRQGQGVRDGLGAATL*PMRGTI
Trigger: GATGGTGCCTCTCATGGGCAAGAGAGTTGCTGCCCC...GAGGCCATCCCGCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCATCGGAGGCCGTCAGCTaGTGCATGAGGAAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: PLCTESVTPPAAPDSARASEAVS*CMRKSG
Trigger: GCCTGACTTCCTCATGCACAAGCTGACGGCCTCCGA...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGACGTCGGCGCCGACAATCTCGGGCTGGTaGGTGCATGCTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: WYLGLKKAPLACALTSAPTISGW*VHAARA
Trigger: GGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGT...CGGCGCCGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp ACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTTCCGCCTTGCCCATCTaGGCGGCCAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: TRKRARTFHPDRGGPAGLSALPI*AASCSG
Trigger: GCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGGA...AAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGGCGGCCCAGCAGGACTaGCCCGGAGTGTCTCATGCA +
Preference number: 5 (lower is better)
Translates to: KRARTFHPDRGGPAGLARAAQQD*PGVSHA
Trigger: TGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCGC...CCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS CCA 90 bp AGGCTGTCACCTGCCTGCCTCGCGGGGCGGTCTGGAAGGGCCGGGTaGCCCACTTACCTCTTTCACAGAGATGCACATGGCCCAGATGAG +
Preference number: 5 (lower is better)
Translates to: RLSPACLAGRSGRAG*PTYLFHRDAHGPDE
Trigger: CTCATCTGGGCCATGTGCATCTCTGTGAAAGAGGTAAGTGGGCCACCCGGCCCTTCCAGACCGCCCCGCGAGGCAGGCAGGTGACAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575865.1
CDS CCA 90 bp CAGAGAGGGATGGAGGCTGTCACCTGCCTGCCTCGCGGGGCGGTCTaGAAGGGCCGGGTGGCCCACTTACCTCTTTCACAGAGATGCACA +
Preference number: 5 (lower is better)
Translates to: QRGMEAVTCLPRGAV*KGRVAHLPLSQRCT
Trigger: TGTGCATCTCTGTGAAAGAGGTAAGTGGGCCACCCGGCCCTTCCAGACCGCCCCGCGAGGCAGGCAGGTGACAGCCTCCATCCCTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575865.1
CDS-3UTR CAA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACTTGAAGAAGGCCCCCTaGGCGTGCGCGTTGACGTCG +
Preference number: 5 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHLKKAP*ACALTS
Trigger: CGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAA...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTATTGAAGAAGGCCCCCTaGGCGTGCGCGTTGACGTCG +
Preference number: 5 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVLKKAP*ACALTS
Trigger: CGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAA...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGCGATGAGCAGGGCTGCGATGTCCCCCTGCCGCCGCTCGATGGCGATGTTCAGCCTTCGTGTTGGTACTaGGGGTTGAAGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: GDEQGCDVPLPPLDGDVQPSCWY*GLKKAP
Trigger: GGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGG...CTGAACATCGCCATCGAGCGGCGGCAGGGGGACATCGCAGCCCTGCTCATCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGCGTGAGGCCATCGTaGTTGCGAGTGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GKEPGPFTQIAAAQQDLPGVRPS*LRVVSS
Trigger: GCTGGAGACCACTCGCAACAACGATGGCCTCACGCC...GGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACATCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGG +
Preference number: 5 (lower is better)
Translates to: ACSARQRTRTPALGSASTSSSAT*HSSPIR
Trigger: CCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGA...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp CACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTTGCATGGGTGTGGTTTaGTGCACCCCTGTGGGCACA +
Preference number: 5 (lower is better)
Translates to: HRVGDSACSARQRTRTPACMGVV*CTPVGT
Trigger: TGTGCCCACAGGGGTGCACAAAACCACACCCATGCA...AGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS GCA 90 bp AGAGCCAGGGAGGTGGTCCTTGCCAGCTTAGCTCAGGGATGTCTCTaGCCTTTCCTGGACAAGCCCACCCAGACCCAGGCTGCCCCCATG +
Preference number: 5 (lower is better)
Translates to: RAREVVLASLAQGCL*PFLDKPTQTQAAPM
Trigger: CATGGGGGCAGCCTGGGTCTGGGTGGGCTTGTCCAGGAAAGGGCAGAGACATCCCTGAGCTAAGCTGGCAAGGACCACCTCCCTGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS-3UTR CAA 90 bp GCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGGGCGGGAAGCTCTCATaGCAGGCAGAGGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: ASRAGLHHPSKPLCTESVGGKLS*QAEGWL
Trigger: CAGCCATCCCTCTGCCTGCAATGAGAGCTTCCCGCC...CACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CAA 90 bp CGGCCACGGTCACCAGGGCGTGAAGGATGTTGTTGCCTCGTGAGTCCCGCGAGGTGTTGGTACTTGGGGTaGAAGAAGGCCCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: RPRSPGREGCCCLVSPARCWYLG*KKAPLA
Trigger: CGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACA...CCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAACAATCTCGGGCTGGTaGGTGCATGCTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQTISGW*VHAARA
Trigger: GGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGT...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACGTGAGGCCATCGTTGTaGCGAGTGGTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHVRPSL*RVVSSS
Trigger: GGAGCTGGAGACCACTCGCAACAACGATGGCCTCAC...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GCCCCTCAGTTCAGACACCCACTGAGCACTGAGCACGAGGGTGCACTCTGCTTCTGCAGCCACCCCATCTaGTGCGTCAGGGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: APQFRHPLSTEHEGALCFCSHPI*CVRAKG
Trigger: CCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCA...GAAGCAGAGTGCACCCTCGTGCTCAGTGCTCAGTGGGTGTCTGAACTGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGTGCAGCCACCCCATCTaGTGCGTCAGGGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQCSHPI*CVRAKG
Trigger: CCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCA...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS TCA 90 bp AGTCCGTGTCCCGAGCTCTCCAAACCCACCTCTTCTTTGTGGGGGTaGTCTCCGCCGGCCTCTTCTCTGGCAGGATGGCAGGGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: SPCPELSKPTSSLWG*SPPASSLAGWQGSH
Trigger: GTGGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGAGGTGGGTTTGGAGAGCTCGGGACACGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS GCA 90 bp GCCCAACAGAGGCTCCGGGTCACCTGGAACTTCCAGCCAGCATTTTaGTCCTCGTCTCAAGGGTGGCTCCAGCCATCCCTCACCTCCCTC +
Preference number: 5 (lower is better)
Translates to: AQQRLRVTWNFQPAF*SSSQGWLQPSLTSL
Trigger: GAGGGAGGTGAGGGATGGCTGGAGCCACCCTTGAGACGAGGAGCAAAATGCTGGCTGGAAGTTCCAGGTGACCCGGAGCCTCTGTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 90 bp GTGTGCACTCTTCTTTGTGGGGGTGATCTCCGCCGGCCTCTTCTCTaGCAGGATGGCAGGGTTCCCACTGGGGGCAGCAACTCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: VCTLLCGGDLRRPLL*QDGRVPTGGSNSLA
Trigger: GGCAAGAGAGTTGCTGCCCCCAGTGGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGAGTGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000572519.1
ENST00000576742.6
CDS CCA 90 bp AACCCACCTCTTCTTTGTGGGGGTGATCTCCGCCGGCCTCTTCTCTaGCAGGATGGCAGGGTTCCCACTGGGGGCAGCAACTCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: NPPLLCGGDLRRPLL*QDGRVPTGGSNSLA
Trigger: GGCAAGAGAGTTGCTGCCCCCAGTGGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGAGGTGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS-3UTR CAA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGGGCGGGAAGCTCTCATaGCAGGCAGAGGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQGGKLS*QAEGWL
Trigger: CAGCCATCCCTCTGCCTGCAATGAGAGCTTCCCGCC...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CAA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACACAGGAGGAGAGGTCTaGGCAACTGTGGGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHTGGEV*ATVGLG
Trigger: ACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGT...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCTCCTCTGCTCTTCCTaGGCCAGCTGTGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSLLCSS*ASCALG
Trigger: CCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGAG...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGGAGGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATTGAAGAAGGCCCCCTaGGCGTGCGCGTTGACGTCG +
Preference number: 5 (lower is better)
Translates to: QEERLLSLLLKTAAPFPPLKKAP*ACALTS
Trigger: CGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAA...TGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTACCTTCGTGTTGGTACTaGGGGTTGAAGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVPSCWY*GLKKAP
Trigger: GGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGG...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGACAATCTCGGGCTGGTaGGTGCATGCTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQTISGW*VHAARA
Trigger: GGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGT...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGAGTCTCCAGCTCCCAGTaGCCACTCCGCAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: SSPRISSLPPSPAHSGMGVSSSQ*PLRSRI
Trigger: GATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGAC...TCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTACGGAGCCGCTTCTCCTaGATCTCACGACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVRSRFS*ISRLRM
Trigger: CATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCG...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTGCAGCCACCCCATCTaGTGCGTCAGGGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLCSHPI*CVRAKG
Trigger: CCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCA...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp CTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCTCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGG +
Preference number: 5 (lower is better)
Translates to: LPQDIQLTSVPRTLWDGISSSAT*HSSPIR
Trigger: CCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGA...GATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 5 (lower is better)
Translates to: TESVTPPAAPDSARAHQLVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCCCACTCAGACAAATaGACAACTGCCCCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: DSACSARQRTRTPALGSASHSDK*TTAPQF
Trigger: GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGA...AGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS GCA 90 bp GGCAGCGGAGGGGCGGGATGGGTGACCCTAGAGAGGTCCTTTCTCTaGTCCAGGTCTCCTCCACGTCCCCAGCGAAGAAGTAAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: GSGGAGWVTLERSFL*SRSPPRPQRRSKAD
Trigger: ATCAGCTTTACTTCTTCGCTGGGGACGTGGAGGAGACCTGGAGCAGAGAAAGGACCTCTCTAGGGTCACCCATCCCGCCCCTCCGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS GCA 90 bp CGTGGCTGGTCCTGCAGACCCCATGATACTGGCACCTGTCTGTGCTaGCCCCTCCTCTTTATCCGTGACCACCCAGGCTCAGACATCACC +
Preference number: 5 (lower is better)
Translates to: RGWSCRPHDTGTCLC*PLLFIRDHPGSDIT
Trigger: GGTGATGTCTGAGCCTGGGTGGTCACGGATAAAGAGGAGGGGGCAGCACAGACAGGTGCCAGTATCATGGGGTCTGCAGGACCAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 90 bp AGGACTCAGCTCCAGTGGGACTCGCCTCCCCAAAGACTCCTCTACTaGCCGGTACTTCAGCTACACCAGACTCCTCACCTCAGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: RTQLQWDSPPQRLLY*PVLQLHQTPHLSGP
Trigger: GGGGCCACTGAGGTGAGGAGTCTGGTGTAGCTGAAGTACCGGCCAGTAGAGGAGTCTTTGGGGAGGCGAGTCCCACTGGAGCTGAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 90 bp GTGTCTACTCTTCTTTGTGGGGGTGATCTCCGCCGGCCTCTTCTCTaGCAGGATGGCAGGGTTCCCACTGGGGGCAGCAACTCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: VSTLLCGGDLRRPLL*QDGRVPTGGSNSLA
Trigger: GGCAAGAGAGTTGCTGCCCCCAGTGGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGAGTAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGAGAGGCACCATCTCCTaGGGGTGGGCTTTCATGGCT +
Preference number: 5 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRRGTIS*GWAFMA
Trigger: AGCCATGAAAGCCCACCCCAAGGAGATGGTGCCTCT...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CAA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGATGCACTGCCGGATGTaGGAATCCATGGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMMHCRM*ESMGLE
Trigger: CTCCAAGCCCATGGATTCCAACATCCGGCAGTGCAT...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCTGGGGCTGTTGGGATaGGATGGGGTCTCTGTCACA +
Preference number: 5 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDLGLLG*DGVSVT
Trigger: TGTGACAGAGACCCCATCCAATCCCAACAGCCCCAG...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCACTCCTCTGCTCTTCCTaGGCCAGCTGTGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSLLCSS*ASCALG
Trigger: CCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGAG...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATCGGAGGCCGTCAGCTaGTGCATGAGGAAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: SLPPSPAHSGMGSRVSHKSEAVS*CMRKSG
Trigger: GCCTGACTTCCTCATGCACAAGCTGACGGCCTCCGA...TTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATGTTGGTACTTGGGGTaGAAGAAGGCCCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: SSPRISSLPPSPAHSGMGCWYLG*KKAPLA
Trigger: CGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACA...TCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCCTTCGTGTTGGTACTaGGGGTTGAAGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDPSCWY*GLKKAP
Trigger: GGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGG...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGAAGTCATTCTGCGTCTaGAAGTCCTCGGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMKSFCV*KSSATV
Trigger: GACCGTGGCCGAGGACTTCAAGACGCAGAATGACTT...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGAAGTCATTCTGCGTCTaGAAGTCCTCGGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: KRARTFHPDRGGPAGLARKSFCV*KSSATV
Trigger: GACCGTGGCCGAGGACTTCAAGACGCAGAATGACTT...CCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGGAGGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCAGTGAGGCCATCGTTGTaGCGAGTGGTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QEERLLSLLLKTAAPFPPVRPSL*RVVSSS
Trigger: GGAGCTGGAGACCACTCGCAACAACGATGGCCTCAC...TGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTCCTTCAGGATCTCCGCCTaGCCCATCTTGGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RVFPERIPLLPQDIQLTSFRISA*PILAAS
Trigger: GCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGAA...GGAGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAGTACGGCTTACAGGCCCGGATGACGGCCCATCTACCTGGGCCCTGCCCAGAGATTTCCAGCACTGAGTaGTCCGTGGTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: KYGLQARMTAHLPGPCPEISSTE*SVVVST
Trigger: CGTGGACACCACCACGGACAACTCAGTGCTGGAAAT...CTCTGGGCAGGGCCCAGGTAGATGGGCCGTCATCCGGGCCTGTAAGCCGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCTTGCAGCCACCCCATCTaGTGCGTCAGGGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: SSATLHSSPIRNLLLSHSCSHPI*CVRAKG
Trigger: CCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCA...AGAATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp CGGCCACGGTCACCAGGGCGTGAAGGATGTTGTTGCCTCGTGAGTCCCGCGAGGGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 5 (lower is better)
Translates to: RPRSPGREGCCCLVSPARVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...CCTCGCGGGACTCACGAGGCAACAACATCCTTCACGCCCTGGTGACCGTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCTGGGTTCCGCTTCTACACTAGGCTCAGACGTTTaGGCTGAAAGCCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ACSARQRTRTPALGSASTLGSDV*AESLLG
Trigger: CCCCAAAAGGCTTTCAGCCAAAACGTCTGAGCCTAG...TGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS TCA 90 bp GAGGCCAATGCGGCAAAACCCTGTGTCTACTCTTCTTTGTGGGGGTaGTCTCCGCCGGCCTCTTCTCTGGCAGGATGGCAGGGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: EANAAKPCVYSSLWG*SPPASSLAGWQGSH
Trigger: GTGGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGAGTAGACACAGGGTTTTGCCGCATTGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS CCA 90 bp CCTCTACTGGCCGGTACTTCAGCTACACCAGACTCCTCACCTCAGTaGCCCCACTCTGAGCCATGGCTCTCATGTCCCTCTGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: PLLAGTSATPDSSPQ*PHSEPWLSCPSAQM
Trigger: CATCTGGGCAGAGGGACATGAGAGCCATGGCTCAGAGTGGGGCCACTGAGGTGAGGAGTCTGGTGTAGCTGAAGTACCGGCCAGTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS-3UTR CAA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATGGGGCAGCAACTCTCTaGCCCATGAGAGGCACCATC +
Preference number: 5 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYGAATL*PMRGTI
Trigger: GATGGTGCCTCTCATGGGCAAGAGAGTTGCTGCCCC...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301365.8
ENST00000576742.6
CDS-3UTR CAA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCTCGGAGGCCGTCAGCTaGTGCATGAGGAAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: KGSGRVFPERIPLLPQDISEAVS*CMRKSG
Trigger: GCCTGACTTCCTCATGCACAAGCTGACGGCCTCCGA...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCATCCTTGGTGTTGGGGTaGATGTTTAACAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PLCTESVTPPAAPDSARASLVLG*MFNKAF
Trigger: GAAGGCCTTGTTAAACATCAACCCCAACACCAAGGA...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTCTGTGTACTCGGCGTaGATGAACCTGCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRSVYSA*MNLPRM
Trigger: CATCCTGGGCAGGTTCATCAACGCCGAGTACACAGA...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCACACAGAGTGGCCCAGTTGAAGAAGGCCCCCTaGGCGTGCGCGTTGACGTCG +
Preference number: 5 (lower is better)
Translates to: QGHKVSICPASLAHRVAQLKKAP*ACALTS
Trigger: CGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAA...CTGGGCCACTCTGTGTGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCCTTCGTGTTGGTACTaGGGGTTGAAGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQPSCWY*GLKKAP
Trigger: GGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGG...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGACCCTTCGTGTTGGTACTaGGGGTTGAAGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: QQSRTPPSLKASLHRVGDPSCWY*GLKKAP
Trigger: GGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGG...GTCACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAGCCTTCGTGTTGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGGTCTCCAGCTCCCAGTaGCCACTCCGCAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: KPSCWYLGLKKAPLACALVSSSQ*PLRSRI
Trigger: GATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGAC...CAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCGTGAGGCCATCGTTGTaGCGAGTGGTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLVRPSL*RVVSSS
Trigger: GGAGCTGGAGACCACTCGCAACAACGATGGCCTCAC...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GTGCATGAGGAAGTCAGGCACATCCTCATCATGGCGCCGCCTGCAAAGCTCCTGGTGAGGCCATCGTTGTaGCGAGTGGTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VHEEVRHILIMAPPAKLLVRPSL*RVVSSS
Trigger: GGAGCTGGAGACCACTCGCAACAACGATGGCCTCAC...CAGGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCCTGACTTCCTCATGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CAGCCCTCAGACACGGCTGCAAAGATGCGCTTCTTCAGCCGCCTCTTTTTCCTCTTCAGGATCTCCGCCTaGCCCATCTTGGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: QPSDTAAKMRFFSRLFFLFRISA*PILAAS
Trigger: GCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGAA...GAGGAAAAAGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCATTTCCAGCACTGAGTaGTCCGTGGTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: LPQDIQLTSVPRTLWDGIISSTE*SVVVST
Trigger: CGTGGACACCACCACGGACAACTCAGTGCTGGAAAT...GATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS CCA 90 bp GGGTGTGTGTGTGGAAAACGTGCCCAACAGAGGCTCCGGGTCACCTaGAACTTCCAGCCAGCATTTTGCTCCTCGTCTCAAGGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: GCVCGKRAQQRLRVT*NFQPAFCSSSQGWL
Trigger: GAGCCACCCTTGAGACGAGGAGCAAAATGCTGGCTGGAAGTTCCAGGTGACCCGGAGCCTCTGTTGGGCACGTTTTCCACACACACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 90 bp AACCCGGCTGGGTGCAGAGTGGATGGAAAGCCATGGGTGTGTGTGTaGAAAACGTGCCCAACAGAGGCTCCGGGTCACCTGGAACTTCCA +
Preference number: 5 (lower is better)
Translates to: NPAGCRVDGKPWVCV*KTCPTEAPGHLELP
Trigger: TGGAAGTTCCAGGTGACCCGGAGCCTCTGTTGGGCACGTTTTCCACACACACACCCATGGCTTTCCATCCACTCTGCACCCAGCCGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS-3UTR CAA 90 bp AAGCCTTCGTGTTGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGAGAGGCACCATCTCCTaGGGGTGGGCTTTCATGGCT +
Preference number: 5 (lower is better)
Translates to: KPSCWYLGLKKAPLACALRGTIS*GWAFMA
Trigger: AGCCATGAAAGCCCACCCCAAGGAGATGGTGCCTCT...CAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCTCCTCTGCTCTTCCTaGGCCAGCTGTGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: LTGPGSSLRKETCVFHSVLLCSS*ASCALG
Trigger: CCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGAG...GACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp AGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCTTGTTGGTACTTGGGGTaGAAGAAGGCCCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: RLLSLLLKTAAPFPPSISCWYLG*KKAPLA
Trigger: CGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACA...AGAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCTGTTGGTACTTGGGGTaGAAGAAGGCCCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: KGSGRVFPERIPLLPQDICWYLG*KKAPLA
Trigger: CGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACA...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTGTCTCCAGCTCCCAGTaGCCACTCCGCAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: SPSQADLQLVKPEASPGTVSSSQ*PLRSRI
Trigger: GATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGAC...AGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TTCTGGTGGTTTCGGCCCCAGTCACCTGGAAAATCCTTCCGTCTCCACTTCACCGGCGTGAGGCCATCGTaGTTGCGAGTGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: FWWFRPQSPGKSFRLHFTGVRPS*LRVVSS
Trigger: GCTGGAGACCACTCGCAACAACGATGGCCTCACGCC...GGTGAAGTGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGAAACCACCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTTCACAGGCGTGAGGCCATCGTaGTTGCGAGTGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSSQLPLRSRIMSYMRFTGVRPS*LRVVSS
Trigger: GCTGGAGACCACTCGCAACAACGATGGCCTCACGCC...TGTGAAGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp AAGAGAATGGGATACTTGGAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGTCCGCCTTGCCCATCTaGGCGGCCAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: KRMGYLEFCWMFRSPRPMSALPI*AASCSG
Trigger: GCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGGA...CATAGGCCTGGGTGACCTGAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CAGCATCTCATGCCGGTTGTCGATGTTGGTGTTGTAGACAGTGATTTCCAGCACTCCGCCTTGCCCATCTaGGCGGCCAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: QHLMPVVDVGVVDSDFQHSALPI*AASCSG
Trigger: GCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGGA...GTGCTGGAAATCACTGTCTACAACACCAACATCGACAACCGGCATGAGATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGATTCAGGATCTCCGCCTaGCCCATCTTGGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRFRISA*PILAAS
Trigger: GCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGAA...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCACGGAGCCGCTTCTCCTaGATCTCACGACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSRSRFS*ISRLRM
Trigger: CATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCG...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CTGCTTCTAGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACATTTCCAGCACTGAGTaGTCCGTGGTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: LLLGQQSRTPPSLKASLHISSTE*SVVVST
Trigger: CGTGGACACCACCACGGACAACTCAGTGCTGGAAAT...GTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCTAGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAATGCAGCCACCCCATCTaGTGCGTCAGGGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKCSHPI*CVRAKG
Trigger: CCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCA...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCAAAGAGAATGGGATACTaGGAGTTCTGCTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: PLCTESVTPPAAPDSARAKRMGY*EFCWMF
Trigger: GAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp TGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: CEVRTRKRARTFHPDRGGMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...GCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCAGGTCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGG +
Preference number: 5 (lower is better)
Translates to: QPSRPAIGKTRGFTRDFRSSSAT*HSSPIR
Trigger: CCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGA...CCTGAAGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTTCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGG +
Preference number: 5 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPSSSAT*HSSPIR
Trigger: CCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGA...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp TTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 5 (lower is better)
Translates to: FPRRVPEGCFQSAFPSSPVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...GGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTCGGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp CTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 5 (lower is better)
Translates to: LPQDIQLTSVPRTLWDGIVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...GATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCTAGGCTCAGACGTTTaGGCTGAAAGCCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDLGSDV*AESLLG
Trigger: CCCCAAAAGGCTTTCAGCCAAAACGTCTGAGCCTAG...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGGGACTTATGGCTTCCCTaGGTAAACCTACCTAGGCTC +
Preference number: 5 (lower is better)
Translates to: KRARTFHPDRGGPAGLARDLWLP*VNLPRL
Trigger: GAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTC...CCGGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCGACTTATGGCTTCCCTaGGTAAACCTACCTAGGCTC +
Preference number: 5 (lower is better)
Translates to: GKEPGPFTQIAAAQQDLPDLWLP*VNLPRL
Trigger: GAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTC...GGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp ACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCACACCAGCTCCCCCTGTGGGCACACTaGAATTTTCAACTAGTCATA +
Preference number: 5 (lower is better)
Translates to: TESVTPPAAPDSARAHQLPLWAH*NFQLVI
Trigger: TATGACTAGTTGAAAATTCAAGTGTGCCCACAGGGG...GAGCTGGTGTGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS GCA 90 bp GGGTGCAGAGTGGATGGAAAGCCATGGGTGTGTGTGTGGAAAACGTaGCCAACAGAGGCTCCGGGTCACCTGGAACTTCCAGCCAGCATT +
Preference number: 5 (lower is better)
Translates to: GCRVDGKPWVCVWKT*PTEAPGHLELPASI
Trigger: AATGCTGGCTGGAAGTTCCAGGTGACCCGGAGCCTCTGTTGGGCACGTTTTCCACACACACACCCATGGCTTTCCATCCACTCTGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS-3UTR CAA 90 bp ATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCACTGGGGCTGTTGGGATaGGATGGGGTCTCTGTCACA +
Preference number: 5 (lower is better)
Translates to: IILGHFAQLSHPESAPQPLGLLG*DGVSVT
Trigger: TGTGACAGAGACCCCATCCAATCCCAACAGCCCCAG...TGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAACTCCTCTGCTCTTCCTaGGCCAGCTGTGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKLLCSS*ASCALG
Trigger: CCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGAG...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGTCCTCGGCCACGGTCACCAGTCGGAGGCCGTCAGCTaGTGCATGAGGAAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: HALHKVILRLEVLGHGHQSEAVS*CMRKSG
Trigger: GCCTGACTTCCTCATGCACAAGCTGACGGCCTCCGA...CTGGTGACCGTGGCCGAGGACTTCAAGACGCAGAATGACTTTGTGAAGCGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTCTGTGTACTCGGCGTaGATGAACCTGCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPASVYSA*MNLPRM
Trigger: CATCCTGGGCAGGTTCATCAACGCCGAGTACACAGA...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAGCCTTCGTGTTGGTACTTGGGGTTGAAGAAGGCCCCCTTGGCGTGCGCGTTGTCTGTGTACTCGGCGTaGATGAACCTGCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: KPSCWYLGLKKAPLACALSVYSA*MNLPRM
Trigger: CATCCTGGGCAGGTTCATCAACGCCGAGTACACAGA...CAACGCGCACGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp ATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCACCTTCGTGTTGGTACTaGGGGTTGAAGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: IILGHFAQLSHPESAPQPPSCWY*GLKKAP
Trigger: GGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGG...TGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp TCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACGTAGAAGCCTTCGTGTaGGTACTTGGGGTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SSLPPSPAHSGMGSRVSHVEAFV*VLGVEE
Trigger: TTCTTCAACCCCAAGTACCAACACGAAGGCTTCTAC...GTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GTGCATGAGGAAGTCAGGCACATCCTCATCATGGCGCCGCCTGCAAAGCTCCTGAAGTCATTCTGCGTCTaGAAGTCCTCGGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: VHEEVRHILIMAPPAKLLKSFCV*KSSATV
Trigger: GACCGTGGCCGAGGACTTCAAGACGCAGAATGACTT...CAGGAGCTTTGCAGGCGGCGCCATGATGAGGATGTGCCTGACTTCCTCATGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATAAGTCATTCTGCGTCTaGAAGTCCTCGGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: GKTPLPAPQDCCPFPAIHKSFCV*KSSATV
Trigger: GACCGTGGCCGAGGACTTCAAGACGCAGAATGACTT...ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTAAGTCATTCTGCGTCTaGAAGTCCTCGGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPAKSFCV*KSSATV
Trigger: GACCGTGGCCGAGGACTTCAAGACGCAGAATGACTT...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CTCCGGAGCCGCTTCTCCTTGATCTCACGACTGAGGATGTACTTCAGGATCTCCGTCTCCAGCTCCCAGTaGCCACTCCGCAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: LRSRFSLISRLRMYFRISVSSSQ*PLRSRI
Trigger: GATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGAC...GGAGATCCTGAAGTACATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCGTGAGGCCATCGTTGTaGCGAGTGGTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QLWVPLLHRGFREFLDFFVRPSL*RVVSSS
Trigger: GGAGCTGGAGACCACTCGCAACAACGATGGCCTCAC...GAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCTTAATGCGGGTAGCTTCCGCCTTGCCCATCTaGGCGGCCAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: PNHFLSDQDVCSGLMRVASALPI*AASCSG
Trigger: GCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGGA...AGCTACCCGCATTAAGCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTCGGAGCCGCTTCTCCTaGATCTCACGACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: HPRPLCTALPSGICSSAIRSRFS*ISRLRM
Trigger: CATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCG...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGCAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCG +
Preference number: 5 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTRPMVS*KSSSTA
Trigger: CGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCT...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGATCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGG +
Preference number: 5 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGSSSAT*HSSPIR
Trigger: CCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGA...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGCAAGCCGACCTGCAATaGGTAAAACCAGAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: ASRAGLHHPSKPLCTESVQADLQ*VKPEAS
Trigger: TGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTG...CACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGCAAGCCGACCTGCAATaGGTAAAACCAGAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRQADLQ*VKPEAS
Trigger: TGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTG...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp TGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCTCTCCATTCCCCACTaGGACAAAAGCTGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: CEVRTRKRARTFHPDRGGLSIPH*DKSWQV
Trigger: AACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAG...GCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CCCAATCGGCCCCATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCATGCATGGGTGTGGTTTaGTGCACCCCTGTGGGCACA +
Preference number: 5 (lower is better)
Translates to: PNRPHQGHKVSICPASLACMGVV*CTPVGT
Trigger: TGTGCCCACAGGGGTGCACAAAACCACACCCATGCA...TGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGATGGGGCCGATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS TCA 90 bp CGGGTGGCCCACTTACCTCTTTCACAGAGATGCACATGGCCCAGATaGGCACAAACATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGT +
Preference number: 5 (lower is better)
Translates to: RVAHLPLSQRCTWPR*AQTSSLGAAATPSC
Trigger: ACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCATCTCTGTGAAAGAGGTAAGTGGGCCACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575865.1
CDS CCA 90 bp AAGAGCTTGAATAACCCGGCTGGGTGCAGAGTGGATGGAAAGCCATaGGTGTGTGTGTGGAAAACGTGCCCAACAGAGGCTCCGGGTCAC +
Preference number: 5 (lower is better)
Translates to: KSLNNPAGCRVDGKP*VCVWKTCPTEAPGH
Trigger: GTGACCCGGAGCCTCTGTTGGGCACGTTTTCCACACACACACCCATGGCTTTCCATCCACTCTGCACCCAGCCGGGTTATTCAAGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 90 bp TCAGCTACACCAGACTCCTCACCTCAGTGGCCCCACTCTGAGCCATaGCTCTCATGTCCCTCTGCCCAGATGCACTTTTTCCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: SATPDSSPQWPHSEP*LSCPSAQMHFFLPL
Trigger: GAGAGGAAGGAAAAAGTGCATCTGGGCAGAGGGACATGAGAGCCATGGCTCAGAGTGGGGCCACTGAGGTGAGGAGTCTGGTGTAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS-3UTR CAA 90 bp TGTGAGGTCAGGACGAGGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCTTGGCAACTGTGGGGTaGGGTTCAAACCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: CEVRTRKRARTFHPDRGGLATVG*GSNPSI
Trigger: GATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAA...GCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCCTCGTCCTGACCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCACAGGAGGAGAGGTCTaGGCAACTGTGGGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: QLWVPLLHRGFREFLDFFTGGEV*ATVGLG
Trigger: ACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGT...GAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCATGCACTGCCGGATGTaGGAATCCATGGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GPGSSLRKETCVFHSVHFMHCRM*ESMGLE
Trigger: CTCCAAGCCCATGGATTCCAACATCCGGCAGTGCAT...GAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CTCCGGAGCCGCTTCTCCTTGATCTCACGACTGAGGATGTACTTCAGGATCTCCCTGGGGCTGTTGGGATaGGATGGGGTCTCTGTCACA +
Preference number: 5 (lower is better)
Translates to: LRSRFSLISRLRMYFRISLGLLG*DGVSVT
Trigger: TGTGACAGAGACCCCATCCAATCCCAACAGCCCCAG...GGAGATCCTGAAGTACATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATTCCTTGGTGTTGGGGTaGATGTTTAACAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDSLVLG*MFNKAF
Trigger: GAAGGCCTTGTTAAACATCAACCCCAACACCAAGGA...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTTCTGTGTACTCGGCGTaGATGAACCTGCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: SPSQADLQLVKPEASPGTSVYSA*MNLPRM
Trigger: CATCCTGGGCAGGTTCATCAACGCCGAGTACACAGA...AGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CTCCGGAGCCGCTTCTCCTTGATCTCACGACTGAGGATGTACTTCAGGATCTCCTGTTGGTACTTGGGGTaGAAGAAGGCCCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LRSRFSLISRLRMYFRISCWYLG*KKAPLA
Trigger: CGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACA...GGAGATCCTGAAGTACATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp TTCTGGTGGTTTCGGCCCCAGTCACCTGGAAAATCCTTCCGTCTCCACTTCACCCGGAGCCGCTTCTCCTaGATCTCACGACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: FWWFRPQSPGKSFRLHFTRSRFS*ISRLRM
Trigger: CATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCG...GGTGAAGTGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGAAACCACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGACGGAGCCGCTTCTCCTaGATCTCACGACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRRSRFS*ISRLRM
Trigger: CATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCG...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CCCAATCGGCCCCATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCAATTTCCAGCACTGAGTaGTCCGTGGTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: PNRPHQGHKVSICPASLAISSTE*SVVVST
Trigger: CGTGGACACCACCACGGACAACTCAGTGCTGGAAAT...TGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGATGGGGCCGATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGACTCCCACTCAGACAAATaGACAACTGCCCCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: QQSRTPPSLKASLHRVGDSHSDK*TTAPQF
Trigger: GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGA...GTCACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTATTGGGGTGGACACTGTaGGGAAGAATATCCAATACA +
Preference number: 5 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVLGWTL*GRISNT
Trigger: TGTATTGGATATTCTTCCCAACAGTGTCCACCCCAA...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCATTGGCTGAAAGCCTTTaGGGGTGGACACTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: YLRPPHTLGWDHGSPTNSLAESL*GWTLLG
Trigger: TCCCAACAGTGTCCACCCCAAAAGGCTTTCAGCCAA...TGAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCTAGGCTCAGACGTTTaGGCTGAAAGCCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: KGSGRVFPERIPLLPQDILGSDV*AESLLG
Trigger: CCCCAAAAGGCTTTCAGCCAAAACGTCTGAGCCTAG...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGAAAAGAGCCAGGACCTTTCACCCAGATCGCGGCGGCCCAGCAGGACTTGCCCCCCCTGTGGGCACACTaGAATTTTCAACTAGTCATA +
Preference number: 5 (lower is better)
Translates to: GKEPGPFTQIAAAQQDLPPLWAH*NFQLVI
Trigger: TATGACTAGTTGAAAATTCAAGTGTGCCCACAGGGG...GGGCAAGTCCTGCTGGGCCGCCGCGATCTGGGTGAAAGGTCCTGGCTCTTTTCC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS TCA 90 bp GTGCCATTGCCGGTGTCCCCATTCCAAAGGTGGAGTTCAAGAGCTTaGATAACCCGGCTGGGTGCAGAGTGGATGGAAAGCCATGGGTGT +
Preference number: 5 (lower is better)
Translates to: VPLPVSPFQRWSSRA*ITRLGAEWMESHGC
Trigger: ACACCCATGGCTTTCCATCCACTCTGCACCCAGCCGGGTTATTCAAGCTCTTGAACTCCACCTTTGGAATGGGGACACCGGCAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS-3UTR CAA 90 bp TTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATTCTTGGCAACTGTGGGGTaGGGTTCAAACCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: LPPSPAHSGMGSRVSHKFLATVG*GSNPSI
Trigger: GATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAA...GAATTTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGTCCTTGGTGTTGGGGTaGATGTTTAACAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQSLVLG*MFNKAF
Trigger: GAAGGCCTTGTTAAACATCAACCCCAACACCAAGGA...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGACTATCTCCTTGGTGTaGGGGTTGATGTTTAACAAG +
Preference number: 5 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMTISLV*GLMFNK
Trigger: CTTGTTAAACATCAACCCCAACACCAAGGAGATAGT...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGCTTCACCCGGGACTTCAGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAACTATCTCCTTGGTGTaGGGGTTGATGTTTAACAAG +
Preference number: 5 (lower is better)
Translates to: GFTRDFRRLPGSRLLLAVTISLV*GLMFNK
Trigger: CTTGTTAAACATCAACCCCAACACCAAGGAGATAGT...TACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCTGAAGTCCCGGGTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTTCACATCTGTGTACTCGGCGTaGATGAACCTGCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: SSSQLPLRSRIMSYMRFTSVYSA*MNLPRM
Trigger: CATCCTGGGCAGGTTCATCAACGCCGAGTACACAGA...TGTGAAGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTTGAAGAAGGCCCCCTaGGCGTGCGCGTTGACGTCG +
Preference number: 5 (lower is better)
Translates to: GSASTPRFPGIPRLLQMHLKKAP*ACALTS
Trigger: CGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAA...ATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp TCCCTATGGCTCTCCATTCCCCACTTGGACAAAAGCTGGCAGGTTAGGCAAATAACAATCTCGGGCTGGTaGGTGCATGCTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SLWLSIPHLDKSWQVRQITISGW*VHAARA
Trigger: GGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGT...TATTTGCCTAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAGCCATAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAGGCGTGAGGCCATCGTaGTTGCGAGTGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLSLGHFSISEAKATPNPGVRPS*LRVVSS
Trigger: GCTGGAGACCACTCGCAACAACGATGGCCTCACGCC...TGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCATTTCCAGCACTGAGTaGTCCGTGGTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: LTGPGSSLRKETCVFHSVISSTE*SVVVST
Trigger: CGTGGACACCACCACGGACAACTCAGTGCTGGAAAT...GACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CTTCTTGACTTATGGCTTCCCTTGGTAAACCTACCTAGGCTCAGACGTTTTGGCTGCAGCCACCCCATCTaGTGCGTCAGGGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: LLDLWLPLVNLPRLRRFGCSHPI*CVRAKG
Trigger: CCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCA...GCCAAAACGTCTGAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp AGGAGGCTCCCAGGCTCCAGACTGCTGCTGGCTGTAGGTTTACACCAGCTGTTTGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: RRLPGSRLLLAVGLHQLFELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...AAACAGCTGGTGTAAACCTACAGCCAGCAGCAGTCTGGAGCCTGGGAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: AVRLTGPGSSLRKETCVFELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...GAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGG +
Preference number: 5 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSSSSAT*HSSPIR
Trigger: CCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGA...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGGCATTGAGAGTGGTTTaGCTGTTGTTCCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRALRVV*LLFLEE
Trigger: TTCTTCCAGGAACAACAGCAAAACCACTCTCAATGC...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GAAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATTCCCACTCAGACAAATaGACAACTGCCCCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: EGFRKGVSRAHSPPPPGYSHSDK*TTAPQF
Trigger: GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGA...ATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCCAAGCCGACCTGCAATaGGTAAAACCAGAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLQADLQ*VKPEAS
Trigger: TGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTG...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GGAAAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCAAGCCGACCTGCAATaGGTAAAACCAGAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: GKTPLPAPQDCCPFPAIHQADLQ*VKPEAS
Trigger: TGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTG...ATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp CCTCTCTGCACAGAGTCGGTGACTCCGCCTGCAGCGCCAGACAGCGCACGCGCAGTTCCTGGAAGAATCTaGGATTTTGTTGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: PLCTESVTPPAAPDSARAVPGRI*DFVEIC
Trigger: ACAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC...TGCGCGTGCGCTGTCTGGCGCTGCAGGCGGAGTCACCGACTCTGTGCAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000576742.6
CDS-3UTR CAA 90 bp CCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCTTAATGCGGGTAGCTGCGGCCCAGCAGGACTaGCCCGGAGTGTCTCATGCA +
Preference number: 5 (lower is better)
Translates to: PNHFLSDQDVCSGLMRVAAAQQD*PGVSHA
Trigger: TGCATGAGACACTCCGGGCAAGTCCTGCTGGGCCGC...AGCTACCCGCATTAAGCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAGGGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAACATCTGGAGCAGTaGCTGGATTCTGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: KGSGRVFPERIPLLPQDIQHLEQ*LDSVEP
Trigger: TGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTG...GATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATTGGGGTGGACACTGTaGGGAAGAATATCCAATACA +
Preference number: 5 (lower is better)
Translates to: SSPRISSLPPSPAHSGMGLGWTL*GRISNT
Trigger: TGTATTGGATATTCTTCCCAACAGTGTCCACCCCAA...TCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS CCA 90 bp CCCACTCTCTCCTCGACTCCCCTTTCACCAGACTGTGAGCAGACGTaGGCATTTTTCTCTCCATGTCCCAAACTCCTTATCCTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: PTLSSTPLSPDCEQT*AFFSPCPKLLILSP
Trigger: TGGGCTCAGGATAAGGAGTTTGGGACATGGAGAGAAAAATGCCCACGTCTGCTCACAGTCTGGTGAAAGGGGAGTCGAGGAGAGAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS-3UTR CAA 90 bp TTCATCAGGCAGGTCTTCCCCGTGTCGGAGGCCGTCAGCTTGTGCATGAGGAAGTCCTTGGTGTTGGGGTaGATGTTTAACAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FIRQVFPVSEAVSLCMRKSLVLG*MFNKAF
Trigger: GAAGGCCTTGTTAAACATCAACCCCAACACCAAGGA...CTTCCTCATGCACAAGCTGACGGCCTCCGACACGGGGAAGACCTGCCTGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTACAATCTCGGGCTGGTaGGTGCATGCTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LHRGFREFLDFFKCIESGTISGW*VHAARA
Trigger: GGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGT...ACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGAAGTCATTCTGCGTCTaGAAGTCCTCGGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: VLLDVQVTQAYGELEEFQKSFCV*KSSATV
Trigger: GACCGTGGCCGAGGACTTCAAGACGCAGAATGACTT...CTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp TCCCTATGGCTCTCCATTCCCCACTTGGACAAAAGCTGGCAGGTTAGGCAAATAGTGAGGCCATCGTTGTaGCGAGTGGTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SLWLSIPHLDKSWQVRQIVRPSL*RVVSSS
Trigger: GGAGCTGGAGACCACTCGCAACAACGATGGCCTCAC...TATTTGCCTAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAGCCATAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGGGCGTGAGGCCATCGTaGTTGCGAGTGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMGVRPS*LRVVSS
Trigger: GCTGGAGACCACTCGCAACAACGATGGCCTCACGCC...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp TGCAGTCCTTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCG +
Preference number: 5 (lower is better)
Translates to: CSPCCLWDTSRSARPRLLRPMVS*KSSSTA
Trigger: CGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCT...GAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAAAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCG +
Preference number: 5 (lower is better)
Translates to: EHLQPKALSEPGRPHPWKRPMVS*KSSSTA
Trigger: CGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCT...TTTCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CACGCGCACACCAGCTCTGGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCAAGAGAATGGGATACTaGGAGTTCTGCTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: HAHTSSGFRFYTEVSGNSKRMGY*EFCWMF
Trigger: GAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT...GGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCCAGAGCTGGTGTGCGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp ATCCTCCCTAGGAGCTGCAGCCACCCCATCTTGTGCGTCAGGGCCAAGGGGTGCACTTCTTCAAATGCATaGAGAGTGGTTTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: ILPRSCSHPILCVRAKGCTSSNA*RVVLLL
Trigger: CAACAGCAAAACCACTCTCAATGCATTTGAAGAAGT...GCACCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCAGCTCCTAGGGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAAAAACATCTCTCAGCTaGAGACAGTTTGAACCTTGG +
Preference number: 5 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQKTSLS*RQFEPW
Trigger: CCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTT...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp CCCTCCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGATGTGGAATGCTGATTaGTACAATCTCCAGGCTAAA +
Preference number: 5 (lower is better)
Translates to: PSSPRISSLPPSPAHSGMMWNAD*YNLQAK
Trigger: TTTAGCCTGGAGATTGTACAAATCAGCATTCCACAT...CATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS GCA 90 bp CCCATTCCAAAGGTGGAGTTCAAGAGCTTGAATAACCCGGCTGGGTaGAGAGTGGATGGAAAGCCATGGGTGTGTGTGTGGAAAACGTGC +
Preference number: 5 (lower is better)
Translates to: PIPKVEFKSLNNPAG*RVDGKPWVCVWKTC
Trigger: GCACGTTTTCCACACACACACCCATGGCTTTCCATCCACTCTGCACCCAGCCGGGTTATTCAAGCTCTTGAACTCCACCTTTGGAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 90 bp ATGGGGAAAGTCAGGACCCTTAGACTTGATCTGCCCAAGGTTACATaGTCTGAGACAGGAGCGGACACCATGTCACCTCACAGCGACAGT +
Preference number: 5 (lower is better)
Translates to: MGKVRTLRLDLPKVT*SETGADTMSPHSDS
Trigger: ACTGTCGCTGTGAGGTGACATGGTGTCCGCTCCTGTCTCAGACCATGTAACCTTGGGCAGATCAAGTCTAAGGGTCCTGACTTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTTCACATTGGCAACTGTGGGGTaGGGTTCAAACCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: SSSQLPLRSRIMSYMRFTLATVG*GSNPSI
Trigger: GATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAA...TGTGAAGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GCAGATCCGAGGGTCTCAGCAGGAAGATGGCAATGCCCTCTTTCACAGAGATGCTTGGCAACTGTGGGGTaGGGTTCAAACCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: ADPRVSAGRWQCPLSQRCLATVG*GSNPSI
Trigger: GATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAA...GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGCTGAGACCCTCGGATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp TTGTTGTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAACAGGAGGAGAGGTCTaGGCAACTGTGGGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: LLSLGHFSISEAKATPNPTGGEV*ATVGLG
Trigger: ACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGT...TGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGACAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACTCCTCTGCTCTTCCTaGGCCAGCTGTGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRLLCSS*ASCALG
Trigger: CCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGAG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACATGTTGGTACTTGGGGTaGAAGAAGGCCCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTCWYLG*KKAPLA
Trigger: CGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACA...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CTTGGCATCATGAATCCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCACAATCTCGGGCTGGTaGGTGCATGCTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LGIMNPNHFLSDQDVCSGTISGW*VHAARA
Trigger: GGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGT...GCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGGATTCATGATGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AGCCTCCACAGCTCTGATATGACCTTCCTGCATGACTTTGCCCAAGTACACATTGTCTCCAGCTCCCAGTaGCCACTCCGCAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: SLHSSDMTFLHDFAQVHIVSSSQ*PLRSRI
Trigger: GATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGAC...AATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATCCGCCTTGCCCATCTaGGCGGCCAGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQSALPI*AASCSG
Trigger: GCCGCTGCAGCTGGCCGCCAAGATGGGCAAGGCGGA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTGCATTGAGAGTGGTTTaGCTGTTGTTCCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: FRKGVSRAHSPPPPGYPAALRVV*LLFLEE
Trigger: TTCTTCCAGGAACAACAGCAAAACCACTCTCAATGC...AGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp CCTCCCCCAGGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATACTTCTTCAAATGCATaGAGAGTGGTTTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PPPGYPAYLRPPHTLGWDTSSNA*RVVLLL
Trigger: CAACAGCAAAACCACTCTCAATGCATTTGAAGAAGT...ATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCCTGGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp AGGCCAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGACTTCTTCAAATGCATaGAGAGTGGTTTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RPAEPDSTIPQSLSAQSRTSSNA*RVVLLL
Trigger: CAACAGCAAAACCACTCTCAATGCATTTGAAGAAGT...CCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGCAGAGCCGGACTCCACCATCCCTCAAAGCCTCTCTGCACAGAGTCGGTGACAAAACATCTCTCAGCTaGAGACAGTTTGAACCTTGG +
Preference number: 5 (lower is better)
Translates to: QQSRTPPSLKASLHRVGDKTSLS*RQFEPW
Trigger: CCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTT...GTCACCGACTCTGTGCAGAGAGGCTTTGAGGGATGGTGGAGTCCGGCTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGAAAACATCTCTCAGCTaGAGACAGTTTGAACCTTGG +
Preference number: 5 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQKTSLS*RQFEPW
Trigger: CCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTT...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp CTTACAGGCCCCGGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCAACATCTGGAGCAGTaGCTGGATTCTGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: LTGPGSSLRKETCVFHSVQHLEQ*LDSVEP
Trigger: TGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTG...GACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCCGGGGCCTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CAA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAATGTGGAATGCTGATTaGTACAATCTCCAGGCTAAA +
Preference number: 5 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQMWNAD*YNLQAK
Trigger: TTTAGCCTGGAGATTGTACAAATCAGCATTCCACAT...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCCCCCTGTGGGCACACTaGAATTTTCAACTAGTCATA +
Preference number: 5 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLPLWAH*NFQLVI
Trigger: TATGACTAGTTGAAAATTCAAGTGTGCCCACAGGGG...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS GCA 90 bp CTCCCATTTGACAGATGGGGAAAGTCAGGACCCTTAGACTTGATCTaGCCAAGGTTACATGGTCTGAGACAGGAGCGGACACCATGTCAC +
Preference number: 5 (lower is better)
Translates to: LPFDRWGKSGPLDLI*PRLHGLRQERTPCH
Trigger: GTGACATGGTGTCCGCTCCTGTCTCAGACCATGTAACCTTGGGCAGATCAAGTCTAAGGGTCCTGACTTTCCCCATCTGTCAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS CCA 90 bp TGGGCTTGGAGAAGACAGGAGGAGAGGTCTTGGCAACTGTGGGGTTaGGTTCAAACCCTTCTATCTCCAGGAAGAAGTGTGCACTCTTCT +
Preference number: 5 (lower is better)
Translates to: WAWRRQEERSWQLWG*VQTLLSPGRSVHSS
Trigger: AGAAGAGTGCACACTTCTTCCTGGAGATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGTCTTCTCCAAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000572519.1
ENST00000576742.6
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGGCGGGAAGCTCTCATaGCAGGCAGAGGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPGGKLS*QAEGWL
Trigger: CAGCCATCCCTCTGCCTGCAATGAGAGCTTCCCGCC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGACAGGAGGAGAGGTCTaGGCAACTGTGGGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMTGGEV*ATVGLG
Trigger: ACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGT...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACATGCACTGCCGGATGTaGGAATCCATGGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYMHCRM*ESMGLE
Trigger: CTCCAAGCCCATGGATTCCAACATCCGGCAGTGCAT...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCTCCTTGGTGTTGGGGTaGATGTTTAACAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SISPSQADLQLVKPEASPSLVLG*MFNKAF
Trigger: GAAGGCCTTGTTAAACATCAACCCCAACACCAAGGA...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCCAGCTCCCAGTTGCCACTCCGCAGTAGGATCATGTCGTACATGCGCTTCACAATCCGCACTATCTCCTaGGTGTTGGGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: SSSQLPLRSRIMSYMRFTIRTIS*VLGLMF
Trigger: AAACATCAACCCCAACACCAAGGAGATAGTGCGGAT...TGTGAAGCGCATGTACGACATGATCCTACTGCGGAGTGGCAACTGGGAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GGCGAGGTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGTTGAAGAAGGCCCCCTaGGCGTGCGCGTTGACGTCG +
Preference number: 5 (lower is better)
Translates to: GEVLFVGKQVQEDRQYHKLKKAP*ACALTS
Trigger: CGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAA...CTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTACCTCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571139.5
CDS-3UTR CAA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGTAGAAGCCTTCGTGTaGGTACTTGGGGTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SISPSQADLQLVKPEASPVEAFV*VLGVEE
Trigger: TTCTTCAACCCCAAGTACCAACACGAAGGCTTCTAC...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCAATAATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCAGTCTCCAGCTCCCAGTaGCCACTCCGCAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: SIIKGSLRLEPSKSLKTSVSSSQ*PLRSRI
Trigger: GATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGAC...TGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTATTATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCGGCGTGAGGCCATCGTaGTTGCGAGTGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFGVRPS*LRVVSS
Trigger: GCTGGAGACCACTCGCAACAACGATGGCCTCACGCC...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCATTCAGGATCTCCGCCTaGCCCATCTTGGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LTAEFQDDIDRAAAISASFRISA*PILAAS
Trigger: GCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGAA...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCAGGATCTCCGCCTaGCCCATCTTGGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQFRISA*PILAAS
Trigger: GCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGAA...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCG +
Preference number: 5 (lower is better)
Translates to: GSASTPRFPGIPRLLQMHRPMVS*KSSSTA
Trigger: CGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCT...ATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTAAGAGAATGGGATACTaGGAGTTCTGCTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPKRMGY*EFCWMF
Trigger: GAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACAATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp TTCACCTCATTGATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: FTSLIRKHSRKSSSATLHMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...GTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp ATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACAGTACATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: IKGSLRLEPSKSLKTSQYMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...GTACTGTGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCAGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 5 (lower is better)
Translates to: GFRFYTEVSGNSSTSSNAVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...TGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp ATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCAGCATTGAGAGTGGTTTaGCTGTTGTTCCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: IILGHFAQLSHPESAPQPALRVV*LLFLEE
Trigger: TTCTTCCAGGAACAACAGCAAAACCACTCTCAATGC...TGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTGCATTGAGAGTGGTTTaGCTGTTGTTCCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPALRVV*LLFLEE
Trigger: TTCTTCCAGGAACAACAGCAAAACCACTCTCAATGC...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTCCCACAAAATAAGCTCAAAGTCTaGGCAAATGCTTTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: QLTSVPRTLWDGITGLPQNKLKV*ANAFLS
Trigger: TGAGAGAAAAGCATTTGCCAAGACTTTGAGCTTATT...TTGTGGGAGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGTTCCGGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGAGTTGCTGGATTCTGTaGAGCCAAAATCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: GSGRVFPERIPLLPQDIQSCWIL*SQNLSQ
Trigger: TTGAGAAAGATTTTGGCTCAACAGAATCCAGCAACT...CTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCCGGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GTCTTTGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAACTCTCCATTCCCCACTaGGACAAAAGCTGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: VFGTLLDQRGQGYSKSKQLSIPH*DKSWQV
Trigger: AACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAG...TTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CAA 90 bp GGATATCCAGCTTACCTCCGTCCCCCGCACACTCTGGGATGGGATCACGGGTCTATACAGAAAATGGTCTaGCCAACAAATTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: GYPAYLRPPHTLGWDHGSIQKMV*PTNSIQ
Trigger: CTGGATGGAATTTGTTGGCAAGACCATTTTCTGTAT...AGACCCGTGATCCCATCCCAGAGTGTGCGGGGGACGGAGGTAAGCTGGATATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAATCTGCTCCTCAGCCATTTTGGGGTGGACACTGTaGGGAAGAATATCCAATACA +
Preference number: 5 (lower is better)
Translates to: HPRPLCTALPSGICSSAILGWTL*GRISNT
Trigger: TGTATTGGATATTCTTCCCAACAGTGTCCACCCCAA...AATGGCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381913.8
CDS-3UTR CAA 90 bp GAGTCAAAGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATGTGCATGGGTGTGGTTTaGTGCACCCCTGTGGGCACA +
Preference number: 5 (lower is better)
Translates to: ESKQFWNSQLHSVELGIMCMGVV*CTPVGT
Trigger: TGTGCCCACAGGGGTGCACAAAACCACACCCATGCA...CATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCTTTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGGGGCAGCAACTCTCTaGCCCATGAGAGGCACCATC +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPGAATL*PMRGTI
Trigger: GATGGTGCCTCTCATGGGCAAGAGAGTTGCTGCCCC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGATGCACTGCCGGATGTaGGAATCCATGGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMMHCRM*ESMGLE
Trigger: CTCCAAGCCCATGGATTCCAACATCCGGCAGTGCAT...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATCGGAGGCCGTCAGCTaGTGCATGAGGAAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPSEAVS*CMRKSG
Trigger: GCCTGACTTCCTCATGCACAAGCTGACGGCCTCCGA...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp AGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGCACTGCGTCGCTGAAGACTATCTCCTTGGTGTaGGGGTTGATGTTTAACAAG +
Preference number: 5 (lower is better)
Translates to: RSPRPMVSLKSSSTASLKTISLV*GLMFNK
Trigger: CTTGTTAAACATCAACCCCAACACCAAGGAGATAGT...CTTCAGCGACGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCAGATCCGCACTATCTCCTaGGTGTTGGGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: VLLDVQVTQAYGELEEFQIRTIS*VLGLMF
Trigger: AAACATCAACCCCAACACCAAGGAGATAGTGCGGAT...CTGGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTTTGAAGAAGGCCCCCTaGGCGTGCGCGTTGACGTCG +
Preference number: 5 (lower is better)
Translates to: PTRVLKVRAGRDLRSISILKKAP*ACALTS
Trigger: CGACGTCAACGCGCACGCCAAGGGGGCCTTCTTCAA...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGACCTTCGTGTTGGTACTaGGGGTTGAAGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRPSCWY*GLKKAP
Trigger: GGGGGCCTTCTTCAACCCCAAGTACCAACACGAAGG...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp GAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCGTAGAAGCCTTCGTGTaGGTACTTGGGGTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: EFCWMFRSPRPMVSLKSSVEAFV*VLGVEE
Trigger: TTCTTCAACCCCAAGTACCAACACGAAGGCTTCTAC...GGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGTCTCCAGCTCCCAGTaGCCACTCCGCAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPVSSSQ*PLRSRI
Trigger: GATCCTACTGCGGAGTGGCAACTGGGAGCTGGAGAC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAGTGAGGCCATCGTTGTaGCGAGTGGTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPVRPSL*RVVSSS
Trigger: GGAGCTGGAGACCACTCGCAACAACGATGGCCTCAC...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTGGCGTGAGGCCATCGTaGTTGCGAGTGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIGVRPS*LRVVSS
Trigger: GCTGGAGACCACTCGCAACAACGATGGCCTCACGCC...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTTTCAGGATCTCCGCCTaGCCCATCTTGGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIFRISA*PILAAS
Trigger: GCTGGCCGCCAAGATGGGCAAGGCGGAGATCCTGAA...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp GTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACACAGTCGGAAATCACGGAGCCGCTTCTCCTaGATCTCACGACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: VFHSVHFTSLIRKHSRKSRSRFS*ISRLRM
Trigger: CATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCG...TGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CGCAGTAGGATCATGTCGTACATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGATTTCCAGCACTGAGTaGTCCGTGGTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: RSRIMSYMRFTKSFCVLKISSTE*SVVVST
Trigger: CGTGGACACCACCACGGACAACTCAGTGCTGGAAAT...CTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACATGATCCTACTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATGCAGCCACCCCATCTaGTGCGTCAGGGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQCSHPI*CVRAKG
Trigger: CCCCTTGGCCCTGACGCACAAGATGGGGTGGCTGCA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp GGGTTCCGCTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCACAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: GFRFYTEVSGNSSTSSNAQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...TGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAGCGGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp GCAGATCCGAGGGTCTCAGCAGGAAGATGGCAATGCCCTCTTTCACAGAGATGCAAGAGAATGGGATACTaGGAGTTCTGCTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: ADPRVSAGRWQCPLSQRCKRMGY*EFCWMF
Trigger: GAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT...GCATCTCTGTGAAAGAGGGCATTGCCATCTTCCTGCTGAGACCCTCGGATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GAGTCAAAGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATGATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: ESKQFWNSQLHSVELGIMMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...CATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCTTTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATCATCCTCGGCCACTTaGCACAGCTCTCCCATCCGG +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPSSSAT*HSSPIR
Trigger: CCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGA...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TGGGACACTTCTCGATCAGCGAGGCCAAGGCTACTCCAAATCCAAGCAAAAACAGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 5 (lower is better)
Translates to: WDTSRSARPRLLQIQAKTVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...TGTTTTTGCTTGGATTTGGAGTAGCCTTGGCCTCGCTGATCGAGAAGTGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp CTCCACGCAGCCCTCAGACACGGCTGCAAAGATGCGCTTCTTCAGCCGCCTCTTGAAGAATCTTGGATTTaGTTGAAATCTGCTGTTCGT +
Preference number: 5 (lower is better)
Translates to: LHAALRHGCKDALLQPPLEESWI*LKSAVR
Trigger: ACGAACAGCAGATTTCAACAAAATCCAAGATTCTTC...AAGAGGCGGCTGAAGAAGCGCATCTTTGCAGCCGTGTCTGAGGGCTGCGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACAGCTCTCCCATCCGGAGCATTGAGAGTGGTTTaGCTGTTGTTCCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: ANTVGNHPRPLCTALPSGALRVV*LLFLEE
Trigger: TTCTTCCAGGAACAACAGCAAAACCACTCTCAATGC...TCCGGATGGGAGAGCTGTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp TTCTGGTGGTTTCGGCCCCAGTCACCTGGAAAATCCTTCCGTCTCCACTTCACCGCATTGAGAGTGGTTTaGCTGTTGTTCCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: FWWFRPQSPGKSFRLHFTALRVV*LLFLEE
Trigger: TTCTTCCAGGAACAACAGCAAAACCACTCTCAATGC...GGTGAAGTGGAGACGGAAGGATTTTCCAGGTGACTGGGGCCGAAACCACCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AAGACTCCTCTCCCTGCTCCTCAAGACTGCTGCCCCTTTCCCGCCATCCATCTCACTTCTTCAAATGCATaGAGAGTGGTTTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KTPLPAPQDCCPFPAIHLTSSNA*RVVLLL
Trigger: CAACAGCAAAACCACTCTCAATGCATTTGAAGAAGT...GAGATGGATGGCGGGAAAGGGGCAGCAGTCTTGAGGAGCAGGGAGAGGAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCTAAAACATCTCTCAGCTaGAGACAGTTTGAACCTTGG +
Preference number: 5 (lower is better)
Translates to: EGCFQSAFPSSPRISSLPKTSLS*RQFEPW
Trigger: CCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTT...AGGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp ACATCTCTCAGCTTGAGACAGTTTGAACCTTGGGGTGTCAGGGGACGTTCACTCCAACATCTGGAGCAGTaGCTGGATTCTGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: TSLSLRQFEPWGVRGRSLQHLEQ*LDSVEP
Trigger: TGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTG...GAGTGAACGTCCCCTGACACCCCAAGGTTCAAACTGTCTCAAGCTGAGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGAAGGGTGTTTCCAGAGCGCATTCCCCTCCTCCCCCAGGATATCCAGCTTACCATACAGAAAATGGTCTaGCCAACAAATTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: GRVFPERIPLLPQDIQLTIQKMV*PTNSIQ
Trigger: CTGGATGGAATTTGTTGGCAAGACCATTTTCTGTAT...GGTAAGCTGGATATCCTGGGGGAGGAGGGGAATGCGCTCTGGAAACACCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGACAGGAGGAGAGGTCTaGGCAACTGTGGGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQTGGEV*ATVGLG
Trigger: ACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGT...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACACAGTCGGAAATCAATGCACTGCCGGATGTaGGAATCCATGGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: VFHSVHFTSLIRKHSRKSMHCRM*ESMGLE
Trigger: CTCCAAGCCCATGGATTCCAACATCCGGCAGTGCAT...TGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCCTGGGGCTGTTGGGATaGGATGGGGTCTCTGTCACA +
Preference number: 5 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFLGLLG*DGVSVT
Trigger: TGTGACAGAGACCCCATCCAATCCCAACAGCCCCAG...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACCTCCTCTGCTCTTCCTaGGCCAGCTGTGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: AVVPGRILDFVEICCSSYLLCSS*ASCALG
Trigger: CCCCAGTGCACAGCTGGCCAAGGAAGAGCAGAGGAG...GTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAACAATCTCGGGCTGGTaGGTGCATGCTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQTISGW*VHAARA
Trigger: GGCCCTGGCAGCATGCACCAACCAGCCCGAGATTGT...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAATTTCCAGCACTGAGTaGTCCGTGGTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRISSTE*SVVVST
Trigger: CGTGGACACCACCACGGACAACTCAGTGCTGGAAAT...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TGGATTTTGTTGAAATCTGCTGTTCGTCTTACAGGCCCCGGGTCTTCGTTAAGGGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: WILLKSAVRLTGPGSSLRELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...CCTTAACGAAGACCCGGGGCCTGTAAGACGAACAGCAGATTTCAACAAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp AGCCTCCACAGCTCTGATATGACCTTCCTGCATGACTTTGCCCAAGTACACATTGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: SLHSSDMTFLHDFAQVHIELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...AATGTGTACTTGGGCAAAGTCATGCAGGAAGGTCATATCAGAGCTGTGGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTATGCGTTCGCTCTCCTaGGAGACGTTCTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: LLHRGFREFLDFFKCIESMRSLS*ETFSTV
Trigger: GACTGTGGAGAACGTCTCCAAGGAGAGCGAACGCAT...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp CCCAATCGGCCCCATCAGGGGCACAAAGTCTCTATCTGTCCAGCTAGTCTGGCAACTTCTTCAAATGCATaGAGAGTGGTTTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PNRPHQGHKVSICPASLATSSNA*RVVLLL
Trigger: CAACAGCAAAACCACTCTCAATGCATTTGAAGAAGT...TGCCAGACTAGCTGGACAGATAGAGACTTTGTGCCCCTGATGGGGCCGATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACATCCCACTCAGACAAATaGACAACTGCCCCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTSHSDK*TTAPQF
Trigger: GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGA...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381913.8
ENST00000577016.5
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAATGCACTGCCGGATGTaGGAATCCATGGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPMHCRM*ESMGLE
Trigger: CTCCAAGCCCATGGATTCCAACATCCGGCAGTGCAT...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATCTGGGGCTGTTGGGATaGGATGGGGTCTCTGTCACA +
Preference number: 5 (lower is better)
Translates to: CLNISNIWSSCWILLSQNLGLLG*DGVSVT
Trigger: TGTGACAGAGACCCCATCCAATCCCAACAGCCCCAG...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCCGCAAACAGTAGAAGCCTTCGTGTaGGTACTTGGGGTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: EGDVRLPFSPLHLIDPQTVEAFV*VLGVEE
Trigger: TTCTTCAACCCCAAGTACCAACACGAAGGCTTCTAC...TGTTTGCGGATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GAGTCAAAGCAATTCTGGAATTCCCAGCTCCATAGTGTGGAGCTTGGCATCATGCAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: ESKQFWNSQLHSVELGIMQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...CATGATGCCAAGCTCCACACTATGGAGCTGGGAATTCCAGAATTGCTTTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCAATAATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCAGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: SIIKGSLRLEPSKSLKTSELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...TGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTATTATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCG +
Preference number: 5 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFRPMVS*KSSSTA
Trigger: CGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCT...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp ATCCGGAATCTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCG +
Preference number: 5 (lower is better)
Translates to: IRNLLLSHSGNIFSNSKMRPMVS*KSSSTA
Trigger: CGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCT...CATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAGATTCCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGAGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 5 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGTCCACTTCACCTCATaGATCCGCAAACACAGTCGG +
Preference number: 5 (lower is better)
Translates to: LLHRGFREFLDFFKCIESVHFTS*IRKHSR
Trigger: CCGACTGTGTTTGCGGATCAATGAGGTGAAGTGGAC...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp TCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGGGACTGAAGAATCTTGGATTTaGTTGAAATCTGCTGTTCGT +
Preference number: 5 (lower is better)
Translates to: SPSQADLQLVKPEASPGTEESWI*LKSAVR
Trigger: ACGAACAGCAGATTTCAACAAAATCCAAGATTCTTC...AGTCCCGGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GGGTCTTCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCAGCATTGAGAGTGGTTTaGCTGTTGTTCCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: GSSLRKETCVFHSVHFTSALRVV*LLFLEE
Trigger: TTCTTCCAGGAACAACAGCAAAACCACTCTCAATGC...TGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGAAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp AGGAGCATTTGCAGCCAAAGGCACTATCTGAACCTGGGAGACCCCATCCCTGGAAGTTGCTGGATTCTGTaGAGCCAAAATCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: RSICSQRHYLNLGDPIPGSCWIL*SQNLSQ
Trigger: TTGAGAAAGATTTTGGCTCAACAGAATCCAGCAACT...TCCAGGGATGGGGTCTCCCAGGTTCAGATAGTGCCTTTGGCTGCAAATGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CACTCCAAGGATGGTCTCCTTTTCCCCGAAGGGTTCCGGAAGGGTGTTTCCAGAATGTGGAATGCTGATTaGTACAATCTCCAGGCTAAA +
Preference number: 5 (lower is better)
Translates to: HSKDGLLFPEGFRKGVSRMWNAD*YNLQAK
Trigger: TTTAGCCTGGAGATTGTACAAATCAGCATTCCACAT...TCTGGAAACACCCTTCCGGAACCCTTCGGGGAAAAGGAGACCATCCTTGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCAATAATAAAGGGCTCTCTCAGGCTGGAGCCTTCTAAGAGCCTGAAGACTTCACTCTCCATTCCCCACTaGGACAAAAGCTGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: SIIKGSLRLEPSKSLKTSLSIPH*DKSWQV
Trigger: AACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAG...TGAAGTCTTCAGGCTCTTAGAAGGCTCCAGCCTGAGAGAGCCCTTTATTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGGACTTATGGCTTCCCTaGGTAAACCTACCTAGGCTC +
Preference number: 5 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMDLWLP*VNLPRL
Trigger: GAGCCTAGGTAGGTTTACCAAGGGAAGCCATAAGTC...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAACAGGAGGAGAGGTCTaGGCAACTGTGGGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQTGGEV*ATVGLG
Trigger: ACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGT...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACTGGGGCTGTTGGGATaGGATGGGGTCTCTGTCACA +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQLGLLG*DGVSVT
Trigger: TGTGACAGAGACCCCATCCAATCCCAACAGCCCCAG...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGATCCGCACTATCTCCTaGGTGTTGGGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMIRTIS*VLGLMF
Trigger: AAACATCAACCCCAACACCAAGGAGATAGTGCGGAT...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATGTTGGTACTTGGGGTaGAAGAAGGCCCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQCWYLG*KKAPLA
Trigger: CGCCAAGGGGGCCTTCTTCAACCCCAAGTACCAACA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCGTAGAAGCCTTCGTGTaGGTACTTGGGGTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SLRKETCVFHSVHFTSLIVEAFV*VLGVEE
Trigger: TTCTTCAACCCCAAGTACCAACACGAAGGCTTCTAC...GATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp GCTGCTGGCTGTAGGTTTACACCAGCTGTTTGCCAAGTAACAAAATCCAGGATGGTAGAAGCCTTCGTGTaGGTACTTGGGGTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: AAGCRFTPAVCQVTKSRMVEAFV*VLGVEE
Trigger: TTCTTCAACCCCAAGTACCAACACGAAGGCTTCTAC...CATCCTGGATTTTGTTACTTGGCAAACAGCTGGTGTAAACCTACAGCCAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACGGAGCCGCTTCTCCTaGATCTCACGACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQRSRFS*ISRLRM
Trigger: CATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCG...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp CTTCTACACCGAGGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTCAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: LLHRGFREFLDFFKCIESQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...ACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACCTCGGTGTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTAGGCCTATGGTGAGCTaGAAGAGTTCCAGCACTGCG +
Preference number: 5 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIRPMVS*KSSSTA
Trigger: CGCAGTGCTGGAACTCTTCAAGCTCACCATAGGCCT...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TCCCTATGGCTCTCCATTCCCCACTTGGACAAAAGCTGGCAGGTTAGGCAAATAAAGAGAATGGGATACTaGGAGTTCTGCTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: SLWLSIPHLDKSWQVRQIKRMGY*EFCWMF
Trigger: GAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT...TATTTGCCTAACCTGCCAGCTTTTGTCCAAGTGGGGAATGGAGAGCCATAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCCATCTCTCCCAGCCAAGCCGACCTGCAATTGGTAAAACCAGAGGCTTCACCCGAAGAATCTTGGATTTaGTTGAAATCTGCTGTTCGT +
Preference number: 5 (lower is better)
Translates to: SISPSQADLQLVKPEASPEESWI*LKSAVR
Trigger: ACGAACAGCAGATTTCAACAAAATCCAAGATTCTTC...GGGTGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTGGCTGGGAGAGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp GAGTTCTGCTGGATGTTCAGGTCACCCAGGCCTATGGTGAGCTTGAAGAGTTCCGTTCCTGGAAGAATCTaGGATTTTGTTGAAATCTGC +
Preference number: 5 (lower is better)
Translates to: EFCWMFRSPRPMVSLKSSVPGRI*DFVEIC
Trigger: GCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC...GGAACTCTTCAAGCTCACCATAGGCCTGGGTGACCTGAACATCCAGCAGAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp TTAGCCTCTGGGCGTAAAATGAAGGAAGTGCTCCTTTTCACTCTGATGCTTCTTTTGGCTGAAAGCCTTTaGGGGTGGACACTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: LASGRKMKEVLLFTLMLLLAESL*GWTLLG
Trigger: TCCCAACAGTGTCCACCCCAAAAGGCTTTCAGCCAA...AAGAAGCATCAGAGTGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCTTGGCAACTGTGGGGTaGGGTTCAAACCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFLATVG*GSNPSI
Trigger: GATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAA...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCATTTGACAGATCCTTGGTGTTGGGGTaGATGTTTAACAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: QSWKRPKKHFHSTLPFDRSLVLG*MFNKAF
Trigger: GAAGGCCTTGTTAAACATCAACCCCAACACCAAGGA...TCTGTCAAATGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATCTGTGTACTCGGCGTaGATGAACCTGCCCAGGATG +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQSVYSA*MNLPRM
Trigger: CATCCTGGGCAGGTTCATCAACGCCGAGTACACAGA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAAAGTCATTCTGCGTCTaGAAGTCCTCGGCCACGGTC +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQKSFCV*KSSATV
Trigger: GACCGTGGCCGAGGACTTCAAGACGCAGAATGACTT...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGCAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp TTAGCCTCTGGGCGTAAAATGAAGGAAGTGCTCCTTTTCACTCTGATGCTTCTTCAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: LASGRKMKEVLLFTLMLLQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...AAGAAGCATCAGAGTGAAAAGGAGCACTTCCTTCATTTTACGCCCAGAGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGTTTCCGGGAATTCCTCGACTTCTTCAAATGCATTGAGAGTGGTTTTGCTGTTCAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: GFREFLDFFKCIESGFAVQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...AACAGCAAAACCACTCTCAATGCATTTGAAGAAGTCGAGGAATTCCCGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp GTAAATGAGAATTTACAAGGATCCGGCACATTCAAGGGAGAATGGGGTGACGATCAAGCCGACCTGCAATaGGTAAAACCAGAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: VNENLQGSGTFKGEWGDDQADLQ*VKPEAS
Trigger: TGAAGCCTCTGGTTTTACCAATTGCAGGTCGGCTTG...ATCGTCACCCCATTCTCCCTTGAATGTGCCGGATCCTTGTAAATTCTCATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATTTGGCTGAAAGCCTTTaGGGGTGGACACTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: CLNISNIWSSCWILLSQNLAESL*GWTLLG
Trigger: TCCCAACAGTGTCCACCCCAAAAGGCTTTCAGCCAA...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CTGCTCCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGGTCCTGGCTACTATCTCCTTGGTGTaGGGGTTGATGTTTAACAAG +
Preference number: 5 (lower is better)
Translates to: LLLSHSGNIFSNSKMVLATISLV*GLMFNK
Trigger: CTTGTTAAACATCAACCCCAACACCAAGGAGATAGT...AGCCAGGACCATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCATCCGCACTATCTCCTaGGTGTTGGGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFIRTIS*VLGLMF
Trigger: AAACATCAACCCCAACACCAAGGAGATAGTGCGGAT...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAATCCGCACTATCTCCTaGGTGTTGGGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPIRTIS*VLGLMF
Trigger: AAACATCAACCCCAACACCAAGGAGATAGTGCGGAT...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp CTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTGCTTCAATCCGCACTATCTCCTaGGTGTTGGGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: LTAEFQDDIDRAAAISASIRTIS*VLGLMF
Trigger: AAACATCAACCCCAACACCAAGGAGATAGTGCGGAT...TGAAGCAGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAGTCCTTGTTGTCTTaGGGACACTTCTCGATCAGC +
Preference number: 5 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIQSLLS*GHFSIS
Trigger: GCTGATCGAGAAGTGTCCCAAAGACAACAAGGACTG...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAAGAGCTGCAGTCCTTGTaGTCTTTGGGACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQELQSL*SLGHFS
Trigger: CGAGAAGTGTCCCAAAGACAACAAGGACTGCAGCTC...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TTCACCTCATTGATCCGCAAACACAGTCGGAAATCATCCTCGGCCACTTTGCACGTTCCTGGAAGAATCTaGGATTTTGTTGAAATCTGC +
Preference number: 5 (lower is better)
Translates to: FTSLIRKHSRKSSSATLHVPGRI*DFVEIC
Trigger: GCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC...GTGCAAAGTGGCCGAGGATGATTTCCGACTGTGTTTGCGGATCAATGAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATTCCCACTCAGACAAATaGACAACTGCCCCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: CLNISNIWSSCWILLSQNSHSDK*TTAPQF
Trigger: GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGA...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAATTCAACCCTCCCATTaGACAGATGGGGAAAGTCAG +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPIQPSH*TDGESQ
Trigger: CTGACTTTCCCCATCTGTCAAATGGGAGGGTTGAAT...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp ACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAATTGGCAACTGTGGGGTaGGGTTCAAACCCTTCTATC +
Preference number: 5 (lower is better)
Translates to: TRVLKVRAGRDLRSISIQLATVG*GSNPSI
Trigger: GATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAA...TTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp CCAACTAGGGTTCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTGTAGAAGCCTTCGTGTaGGTACTTGGGGTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: PTRVLKVRAGRDLRSISIVEAFV*VLGVEE
Trigger: TTCTTCAACCCCAAGTACCAACACGAAGGCTTCTAC...AATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGAACCCTAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAAAGAGAATGGGATACTaGGAGTTCTGCTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPKRMGY*EFCWMF
Trigger: GAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp CGCAGTAGGATCATGTCGTACATGCGCTTCACAAAGTCATTCTGCGTCTTGAAGACTTCTTCAAATGCATaGAGAGTGGTTTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RSRIMSYMRFTKSFCVLKTSSNA*RVVLLL
Trigger: CAACAGCAAAACCACTCTCAATGCATTTGAAGAAGT...CTTCAAGACGCAGAATGACTTTGTGAAGCGCATGTACGACATGATCCTACTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS-3UTR CAA 90 bp TCGTTAAGGAAGGAGACGTGCGTCTTCCATTCAGTCCACTTCACCTCATTGATCACTTCTTCAAATGCATaGAGAGTGGTTTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SLRKETCVFHSVHFTSLITSSNA*RVVLLL
Trigger: CAACAGCAAAACCACTCTCAATGCATTTGAAGAAGT...GATCAATGAGGTGAAGTGGACTGAATGGAAGACGCACGTCTCCTTCCTTAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381913.8
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS-3UTR CAA 90 bp TCTAAAAGTCAGAGCTGGAAGAGACCTAAGAAGCATTTCCATTCAACCCTCCCAACTATCTCCTTGGTGTaGGGGTTGATGTTTAACAAG +
Preference number: 5 (lower is better)
Translates to: SKSQSWKRPKKHFHSTLPTISLV*GLMFNK
Trigger: CTTGTTAAACATCAACCCCAACACCAAGGAGATAGT...TGGGAGGGTTGAATGGAAATGCTTCTTAGGTCTCTTCCAGCTCTGACTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS-3UTR CAA 90 bp GTAAATGAGAATTTACAAGGATCCGGCACATTCAAGGGAGAATGGGGTGACGATACTATCTCCTTGGTGTaGGGGTTGATGTTTAACAAG +
Preference number: 5 (lower is better)
Translates to: VNENLQGSGTFKGEWGDDTISLV*GLMFNK
Trigger: CTTGTTAAACATCAACCCCAACACCAAGGAGATAGT...ATCGTCACCCCATTCTCCCTTGAATGTGCCGGATCCTTGTAAATTCTCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp CCAAGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTAAAACATCTCTCAGCTaGAGACAGTTTGAACCTTGG +
Preference number: 5 (lower is better)
Translates to: PSNKIQDVSHSDKLTTAPKTSLS*RQFEPW
Trigger: CCAAGGTTCAAACTGTCTCAAGCTGAGAGATGTTTT...AGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301365.8
ENST00000381913.8
ENST00000576742.6
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp CTTGGCATCATGAATCCAAACCACTTCCTTTCAGACCAAGATGTCTGTTCAGGCAGTTGCTGGATTCTGTaGAGCCAAAATCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: LGIMNPNHFLSDQDVCSGSCWIL*SQNLSQ
Trigger: TTGAGAAAGATTTTGGCTCAACAGAATCCAGCAACT...GCCTGAACAGACATCTTGGTCTGAAAGGAAGTGGTTTGGATTCATGATGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGTTCGTTCCTGGAAGAATCTaGGATTTTGTTGAAATCTGC +
Preference number: 5 (lower is better)
Translates to: NKIQDVSHSDKLTTAPQFVPGRI*DFVEIC
Trigger: GCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC...GAACTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000577016.5
ENST00000616411.4
CDS-3UTR CAA 90 bp ATGCGACTAACTGCTGAGTTCCAAGATGATATCGATCGAGCAGCTGCTATTTCTATACAGAAAATGGTCTaGCCAACAAATTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: MRLTAEFQDDIDRAAAISIQKMV*PTNSIQ
Trigger: CTGGATGGAATTTGTTGGCAAGACCATTTTCTGTAT...AGAAATAGCAGCTGCTCGATCGATATCATCTTGGAACTCAGCAGTTAGTCGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp GGCGAGGTACTCTTTGTAGGCAAACAAGTACAAGAAGACAGACAGTATCACAAGGAAGAATCTTGGATTTaGTTGAAATCTGCTGTTCGT +
Preference number: 5 (lower is better)
Translates to: GEVLFVGKQVQEDRQYHKEESWI*LKSAVR
Trigger: ACGAACAGCAGATTTCAACAAAATCCAAGATTCTTC...CTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTACCTCGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571139.5
CDS-3UTR CAA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATGTTCCTGGAAGAATCTaGGATTTTGTTGAAATCTGC +
Preference number: 5 (lower is better)
Translates to: CLNISNIWSSCWILLSQNVPGRI*DFVEIC
Trigger: GCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616411.4
CDS-3UTR CAA 90 bp AGTAACAAAATCCAGGATGTTTCCCACTCAGACAAATTGACAACTGCCCCTCAGAATAAGCTCAAAGTCTaGGCAAATGCTTTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SNKIQDVSHSDKLTTAPQNKLKV*ANAFLS
Trigger: TGAGAGAAAAGCATTTGCCAAGACTTTGAGCTTATT...CTGAGGGGCAGTTGTCAATTTGTCTGAGTGGGAAACATCCTGGATTTTGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp AGCCAGATGAACTTATCTATCGCCATGTTATCTGAAGGCCAAATTTCTATTTCTAAGAGAATGGGATACTaGGAGTTCTGCTGGATGTTC +
Preference number: 5 (lower is better)
Translates to: SQMNLSIAMLSEGQISISKRMGY*EFCWMF
Trigger: GAACATCCAGCAGAACTCCAAGTATCCCATTCTCTT...AGAAATAGAAATTTGGCCTTCAGATAACATGGCGATAGATAAGTTCATCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381913.8
ENST00000576742.6
ENST00000616411.4
CDS-3UTR CAA 90 bp TGCTTAAACATCTCCAACATCTGGAGCAGTTGCTGGATTCTGTTGAGCCAAAATGAAGAATCTTGGATTTaGTTGAAATCTGCTGTTCGT +
Preference number: 5 (lower is better)
Translates to: CLNISNIWSSCWILLSQNEESWI*LKSAVR
Trigger: ACGAACAGCAGATTTCAACAAAATCCAAGATTCTTC...ATTTTGGCTCAACAGAATCCAGCAACTGCTCCAGATGTTGGAGATGTTTAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616411.4
CDS-3UTR CAA 90 bp GCTGTTGTTCCTGGAAGAATCTTGGATTTTGTTGAAATCTGCTGTTCGTCTTACGTTCCTGGAAGAATCTaGGATTTTGTTGAAATCTGC +
Preference number: 5 (lower is better)
Translates to: AVVPGRILDFVEICCSSYVPGRI*DFVEIC
Trigger: GCAGATTTCAACAAAATCCAAGATTCTTCCAGGAAC...GTAAGACGAACAGCAGATTTCAACAAAATCCAAGATTCTTCCAGGAACAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571139.5
ENST00000573539.5
ENST00000577016.5
CDS CCA 72 bp AGGGCCACCCCGGGTTCAAGGGACGCACAGGTGAAGTaGGCTGGGGGACAGCGTGAGAGGCACCCAATGAGC +
Preference number: 6 (lower is better)
Translates to: RATPGSRDAQVK*AGGQRERHPMS
Trigger: GCTCATTGGGTGCCTCTCACGCTGTCCCCCAGCCCACTTCACCTGTGCGTCCCTTGAACCCGGGGTGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 72 bp CCTGCCTGCCTCGCGGGGCGGTCTGGAAGGGCCGGGTaGCCCACTTACCTCTTTCACAGAGATGCACATGGC +
Preference number: 6 (lower is better)
Translates to: PACLAGRSGRAG*PTYLFHRDAHG
Trigger: GCCATGTGCATCTCTGTGAAAGAGGTAAGTGGGCCACCCGGCCCTTCCAGACCGCCCCGCGAGGCAGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575865.1
CDS CCA 72 bp ATGGAGGCTGTCACCTGCCTGCCTCGCGGGGCGGTCTaGAAGGGCCGGGTGGCCCACTTACCTCTTTCACAG +
Preference number: 6 (lower is better)
Translates to: MEAVTCLPRGAV*KGRVAHLPLSQ
Trigger: CTGTGAAAGAGGTAAGTGGGCCACCCGGCCCTTCCAGACCGCCCCGCGAGGCAGGCAGGTGACAGCCTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575865.1
CDS TCA 72 bp TCCTGGACAAGCCCACCCAGACCCAGGCTGCCCCCATaGCCCCACACGACACCTGTCTGGCTCCTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: SWTSPPRPRLPP*PHTTPVWLLLH
Trigger: GTGGAGAAGGAGCCAGACAGGTGTCGTGTGGGGTCATGGGGGCAGCCTGGGTCTGGGTGGGCTTGTCCAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS GCA 72 bp ATGGCTGGTGAGGTTCTGGGTGGTCGTGGCAACCCTTaGCCTGAGATCACCGCATGTCTGGGGCCCAAGGCC +
Preference number: 6 (lower is better)
Translates to: MAGEVLGGRGNP*PEITACLGPKA
Trigger: GGCCTTGGGCCCCAGACATGCGGTGATCTCAGGGCAAGGGTTGCCACGACCACCCAGAACCTCACCAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000572519.1
ENST00000573539.5
ENST00000574773.1
ENST00000576742.6
CDS CCA 72 bp CTTCTTTGTGGGGGTGATCTCCGCCGGCCTCTTCTCTaGCAGGATGGCAGGGTTCCCACTGGGGGCAGCAAC +
Preference number: 6 (lower is better)
Translates to: LLCGGDLRRPLL*QDGRVPTGGSN
Trigger: GTTGCTGCCCCCAGTGGGAACCCTGCCATCCTGCCAGAGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000572519.1
ENST00000573539.5
ENST00000574773.1
ENST00000576742.6
CDS GCA 72 bp GGGGCGGGATGGGTGACCCTAGAGAGGTCCTTTCTCTaGTCCAGGTCTCCTCCACGTCCCCAGCGAAGAAGT +
Preference number: 6 (lower is better)
Translates to: GAGWVTLERSFL*SRSPPRPQRRS
Trigger: ACTTCTTCGCTGGGGACGTGGAGGAGACCTGGAGCAGAGAAAGGACCTCTCTAGGGTCACCCATCCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CAA 90 bp TGCCCAACAGAGGCTCCGGGTCACCTGGAACTTCCAGCCAGCATTTaGCTCCTCGTCTCAAGGGTGGCTCCAGCCATCCCTCACCTCCCT +
Preference number: 6 (lower is better)
Translates to: CPTEAPGHLELPASI*LLVSRVAPAIPHLP
Trigger: AGGGAGGTGAGGGATGGCTGGAGCCACCCTTGAGACGAGGAGCAAAATGCTGGCTGGAAGTTCCAGGTGACCCGGAGCCTCTGTTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS GCA 72 bp AGGCTCCGGGTCACCTGGAACTTCCAGCCAGCATTTTaGTCCTCGTCTCAAGGGTGGCTCCAGCCATCCCTC +
Preference number: 6 (lower is better)
Translates to: RLRVTWNFQPAF*SSSQGWLQPSL
Trigger: GAGGGATGGCTGGAGCCACCCTTGAGACGAGGAGCAAAATGCTGGCTGGAAGTTCCAGGTGACCCGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 72 bp CACCGGGACTCCTCCTTCTCCTTTACCTCCCGTGGCTaGTCCTGCAGACCCCATGATACTGGCACCTGTCTG +
Preference number: 6 (lower is better)
Translates to: HRDSSFSFTSRG*SCRPHDTGTCL
Trigger: CAGACAGGTGCCAGTATCATGGGGTCTGCAGGACCAGCCACGGGAGGTAAAGGAGAAGGAGGAGTCCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CAA 72 bp GAGGCTCCGGGTCACCTGGAACTTCCAGCCAGCATTTaGCTCCTCGTCTCAAGGGTGGCTCCAGCCATCCCT +
Preference number: 6 (lower is better)
Translates to: EAPGHLELPASI*LLVSRVAPAIP
Trigger: AGGGATGGCTGGAGCCACCCTTGAGACGAGGAGCAAAATGCTGGCTGGAAGTTCCAGGTGACCCGGAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS TCA 72 bp GCGGCAAAACCCTGTGTCTACTCTTCTTTGTGGGGGTaGTCTCCGCCGGCCTCTTCTCTGGCAGGATGGCAG +
Preference number: 6 (lower is better)
Translates to: AAKPCVYSSLWG*SPPASSLAGWQ
Trigger: CTGCCATCCTGCCAGAGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGAGTAGACACAGGGTTTTGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS GCA 72 bp TCCTGCAGACCCCATGATACTGGCACCTGTCTGTGCTaGCCCCTCCTCTTTATCCGTGACCACCCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: SCRPHDTGTCLC*PLLFIRDHPGS
Trigger: TGAGCCTGGGTGGTCACGGATAAAGAGGAGGGGGCAGCACAGACAGGTGCCAGTATCATGGGGTCTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS GCA 72 bp GACTCCTCCTTCTCCTTTACCTCCCGTGGCTGGTCCTaGAGACCCCATGATACTGGCACCTGTCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: DSSFSFTSRGWS*RPHDTGTCLCC
Trigger: GCAGCACAGACAGGTGCCAGTATCATGGGGTCTGCAGGACCAGCCACGGGAGGTAAAGGAGAAGGAGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 72 bp GGGTGCAGAGTGGATGGAAAGCCATGGGTGTGTGTGTaGAAAACGTGCCCAACAGAGGCTCCGGGTCACCTG +
Preference number: 6 (lower is better)
Translates to: GCRVDGKPWVCV*KTCPTEAPGHL
Trigger: CAGGTGACCCGGAGCCTCTGTTGGGCACGTTTTCCACACACACACCCATGGCTTTCCATCCACTCTGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 72 bp GGACAGCAATTTAGGAGACATGCCAAGCTCAGCCCTTaGCTGGGCGGAGGAGGCTTTGCAGAGCTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: GQQFRRHAKLSP*LGGGGFAELSL
Trigger: CAGGCTCAGCTCTGCAAAGCCTCCTCCGCCCAGCCAAGGGCTGAGCTTGGCATGTCTCCTAAATTGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 72 bp AGTGGCTGGGTCCATGAAAGAGGGCAGGTGATCGGATaGGTGGATGGGGGTGGAAGAGGACAAGGGACACTG +
Preference number: 6 (lower is better)
Translates to: SGWVHERGQVIG*VDGGGRGQGTL
Trigger: CAGTGTCCCTTGTCCTCTTCCACCCCCATCCACCCATCCGATCACCTGCCCTCTTTCATGGACCCAGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575865.1
CDS TCA 72 bp TCTCCAGGAAGAAGTGTGCACTCTTCTTTGTGGGGGTaGTCTCCGCCGGCCTCTTCTCTGGCAGGATGGCAG +
Preference number: 6 (lower is better)
Translates to: SPGRSVHSSLWG*SPPASSLAGWQ
Trigger: CTGCCATCCTGCCAGAGAAGAGGCCGGCGGAGATCACCCCCACAAAGAAGAGTGCACACTTCTTCCTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000572519.1
ENST00000576742.6
CDS TCA 72 bp CCCAGCCCTCTGGGAGGTCAAAGTGGGCAGATCAGTTaGGGTCAGGAGTTTGAGGCCAATGCGGCAAAACCC +
Preference number: 6 (lower is better)
Translates to: PSPLGGQSGQIS*GQEFEANAAKP
Trigger: GGGTTTTGCCGCATTGGCCTCAAACTCCTGACCTCAACTGATCTGCCCACTTTGACCTCCCAGAGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571139.5
ENST00000573539.5
CDS CCA 72 bp ACTCTCTTGCCCATGAGAGGCACCATCTCCTTGGGGTaGGCTTTCATGGCTGGTGAGGTTCTGGGTGGTCGT +
Preference number: 6 (lower is better)
Translates to: TLLPMRGTISLG*AFMAGEVLGGR
Trigger: ACGACCACCCAGAACCTCACCAGCCATGAAAGCCCACCCCAAGGAGATGGTGCCTCTCATGGGCAAGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301365.8
ENST00000571139.5
ENST00000572519.1
ENST00000573539.5
ENST00000574773.1
ENST00000576742.6
CDS CCA 72 bp TGCAGAATCTATAATGGAGGCAGCGGAGGGGCGGGATaGGTGACCCTAGAGAGGTCCTTTCTCTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: CRIYNGGSGGAG*VTLERSFLCSR
Trigger: CCTGGAGCAGAGAAAGGACCTCTCTAGGGTCACCCATCCCGCCCCTCCGCTGCCTCCATTATAGATTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CAA 72 bp ATGGCTCCCCACTGCCCTGAGGATTATCCAAGTTCCTaGACTGACCCCCAGGACTCAGCTCCAGTGGGACTC +
Preference number: 6 (lower is better)
Translates to: MAPHCPEDYPSS*TDPQDSAPVGL
Trigger: GAGTCCCACTGGAGCTGAGTCCTGGGGGTCAGTCAAGGAACTTGGATAATCCTCAGGGCAGTGGGGAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CAA 90 bp GGTGCCATTGCCGGTGTCCCCATTCCAAAGGTGGAGTTCAAGAGCTaGAATAACCCGGCTGGGTGCAGAGTGGATGGAAAGCCATGGGTG +
Preference number: 6 (lower is better)
Translates to: GAIAGVPIPKVEFKS*NNPAGCRVDGKPWV
Trigger: CACCCATGGCTTTCCATCCACTCTGCACCCAGCCGGGTTATTCAAGCTCTTGAACTCCACCTTTGGAATGGGGACACCGGCAATGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS TCA 72 bp ATTTGGCTCATTCCTCCTGACCTGGATCTTCTCCTCTaGTGCGCCATGTCAGATGGCCCCGCCATCCCTCCA +
Preference number: 6 (lower is better)
Translates to: IWLIPPDLDLLL*CAMSDGPAIPP
Trigger: TGGAGGGATGGCGGGGCCATCTGACATGGCGCATCAGAGGAGAAGATCCAGGTCAGGAGGAATGAGCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS GCA 72 bp GTGGATGGAAAGCCATGGGTGTGTGTGTGGAAAACGTaGCCAACAGAGGCTCCGGGTCACCTGGAACTTCCA +
Preference number: 6 (lower is better)
Translates to: VDGKPWVCVWKT*PTEAPGHLELP
Trigger: TGGAAGTTCCAGGTGACCCGGAGCCTCTGTTGGGCACGTTTTCCACACACACACCCATGGCTTTCCATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS TCA 72 bp CCGGTGTCCCCATTCCAAAGGTGGAGTTCAAGAGCTTaGATAACCCGGCTGGGTGCAGAGTGGATGGAAAGC +
Preference number: 6 (lower is better)
Translates to: PVSPFQRWSSRA*ITRLGAEWMES
Trigger: GCTTTCCATCCACTCTGCACCCAGCCGGGTTATTCAAGCTCTTGAACTCCACCTTTGGAATGGGGACACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS TCA 72 bp ACAGAAACACTCTCAATGCCAACACATGCTGAGCGCTaGCCGCGTGCCAGGCGCTGCACTGAGCACTTTGTT +
Preference number: 6 (lower is better)
Translates to: TETLSMPTHAER*PRARRCTEHFV
Trigger: AACAAAGTGCTCAGTGCAGCGCCTGGCACGCGGTCAGCGCTCAGCATGTGTTGGCATTGAGAGTGTTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 72 bp TGTGGAAAACGTGCCCAACAGAGGCTCCGGGTCACCTaGAACTTCCAGCCAGCATTTTGCTCCTCGTCTCAA +
Preference number: 6 (lower is better)
Translates to: CGKRAQQRLRVT*NFQPAFCSSSQ
Trigger: TTGAGACGAGGAGCAAAATGCTGGCTGGAAGTTCCAGGTGACCCGGAGCCTCTGTTGGGCACGTTTTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 72 bp AATAACCCGGCTGGGTGCAGAGTGGATGGAAAGCCATaGGTGTGTGTGTGGAAAACGTGCCCAACAGAGGCT +
Preference number: 6 (lower is better)
Translates to: NNPAGCRVDGKP*VCVWKTCPTEA
Trigger: AGCCTCTGTTGGGCACGTTTTCCACACACACACCCATGGCTTTCCATCCACTCTGCACCCAGCCGGGTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CAA 72 bp GTGAACTTCCTGGACAGGCTCCGGAGCCGCTTCTCCTaGATCTCACGACTGAGGATGTACTTCAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: VNFLDRLRSRFS*ISRLRMYFRIW
Trigger: CCAGATCCTGAAGTACATCCTCAGTCGTGAGATCAAGGAGAAGCGGCTCCGGAGCCTGTCCAGGAAGTTCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571005.5
CDS TCA 72 bp GGATGGGCTCAGAGAAGGCAGCCTGACGGTTCCTGCTaGGGAAAGGACGTGGGATTTTCCCAAAACTCTATC +
Preference number: 6 (lower is better)
Translates to: GWAQRRQPDGSC*GKDVGFSQNSI
Trigger: GATAGAGTTTTGGGAAAATCCCACGTCCTTTCCTCAGCAGGAACCGTCAGGCTGCCTTCTCTGAGCCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS TCA 72 bp CACTTACCTCTTTCACAGAGATGCACATGGCCCAGATaGGCACAAACATCCTCCCTAGGAGCTGCAGCCACC +
Preference number: 6 (lower is better)
Translates to: HLPLSQRCTWPR*AQTSSLGAAAT
Trigger: GGTGGCTGCAGCTCCTAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGCATCTCTGTGAAAGAGGTAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575865.1
CDS GCA 72 bp AAGGTGGAGTTCAAGAGCTTGAATAACCCGGCTGGGTaGAGAGTGGATGGAAAGCCATGGGTGTGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: KVEFKSLNNPAG*RVDGKPWVCVW
Trigger: CCACACACACACCCATGGCTTTCCATCCACTCTGCACCCAGCCGGGTTATTCAAGCTCTTGAACTCCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CCA 72 bp GTCAGGACCCTTAGACTTGATCTGCCCAAGGTTACATaGTCTGAGACAGGAGCGGACACCATGTCACCTCAC +
Preference number: 6 (lower is better)
Translates to: VRTLRLDLPKVT*SETGADTMSPH
Trigger: GTGAGGTGACATGGTGTCCGCTCCTGTCTCAGACCATGTAACCTTGGGCAGATCAAGTCTAAGGGTCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572519.1
CDS CAA 72 bp CCGCGTGCCAGGCGCTGCACTGAGCACTTTGTTGACTaGATCCCAATTAACCATCATCCTATAGTTGGTGCC +
Preference number: 6 (lower is better)
Translates to: PRARRCTEHFVD*IPINHHPIVGA
Trigger: GGCACCAACTATAGGATGATGGTTAATTGGGATCAAGTCAACAAAGTGCTCAGTGCAGCGCCTGGCACGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574773.1
CDS CAA 90 bp ATGGGCTTGGAGAAGACAGGAGGAGAGGTCTTGGCAACTGTGGGGTaGGGTTCAAACCCTTCTATCTCCAGGAAGAAGTGTGCACTCTTC +
Preference number: 6 (lower is better)
Translates to: MGLEKTGGEVLATVG*GSNPSISRKKCALF
Trigger: GAAGAGTGCACACTTCTTCCTGGAGATAGAAGGGTTTGAACCCAACCCCACAGTTGCCAAGACCTCTCCTCCTGTCTTCTCCAAGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301365.8
ENST00000572519.1
ENST00000576742.6
CDS TCA 72 bp TGTCTCTCAGGCACCTCCCACCCAACATTTCACAACTaGATTTGGCTCATTCCTCCTGACCTGGATCTTCTC +
Preference number: 6 (lower is better)
Translates to: CLSGTSHPTFHN*IWLIPPDLDLL
Trigger: GAGAAGATCCAGGTCAGGAGGAATGAGCCAAATTCAGTTGTGAAATGTTGGGTGGGAGGTGCCTGAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574773.1