Pregenerated sensors for TRPT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000149743Ensembl transcript IDs: ENST00000317459.11, ENST00000394546.6, ENST00000394547.7, ENST00000536158.5, ENST00000536234.1, ENST00000537907.1, ENST00000539436.5, ENST00000539595.5, ENST00000540472.1, ENST00000541278.5, ENST00000541928.1, ENST00000542040.1, ENST00000544286.5, ENST00000545812.1, ENST00000546089.5, ENST00000546133.5
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCTGACACTCGTCTCCAGGCAGTCCTaGGGCCAGGTGAATGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: LLDPPPFSGAVLGATLTLVSRQS*GQVNVR Trigger: ACGCACATTCACCTGGCCCCAGGACTGCCTGGAGAC...GAGTGTCAGAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR CCA 90 bp | TTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCTGACACTCACAAGGAATAGGGGCTaGGGTGGTGGTTCTCACGGG | + |
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Preference number: 4 (lower is better) Translates to: LLDPPPFSGAVLGATLTLTRNRG*GGGSHG Trigger: CCCGTGAGAACCACCACCCCAGCCCCTATTCCTTGT...GAGTGTCAGAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR CCA 90 bp | TTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCTGACACTCCTCTGGAGCTGTGCTTaGGGCTACTCTGACACTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLDPPPFSGAVLGATLTLLWSCA*GYSDTL Trigger: CAGAGTGTCAGAGTAGCCCCAAGCACAGCTCCAGAG...GAGTGTCAGAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR CCA 90 bp | TTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCTGACACTCTCCTCCTCCTTTCTCTaGAGCTGTGCTTGGGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: LLDPPPFSGAVLGATLTLSSSFL*SCAWGY Trigger: GTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGA...GAGTGTCAGAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR TCA 90 bp | TATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCTAGTCCTGGGGCCAGGTaGATGTGCGTCCTTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: YFIVGSSSFLWSCAWGYSSPGAR*MCVLPW Trigger: CCAGGGAAGGACGCACATTCACCTGGCCCCAGGACT...AGAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR TCA 90 bp | TTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCTGACACTCTGCTTGGGGCTACTCTaGCACTCTGTCTCTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LLDPPPFSGAVLGATLTLCLGLL*HSVSSS Trigger: TGATGAAGAGACAGAGTGTCAGAGTAGCCCCAAGCA...GAGTGTCAGAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR TCA 90 bp | ATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCTGAAGCTAGGAGAGAGGTaGGGGCAGAAGGGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: ILLLDPPPFSGAVLGATLKLGER*GQKGTA Trigger: AGCTGTGCCCTTCTGCCCTCACCTCTCTCCTAGCTT...CAGAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR GCA 90 bp | TATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCTCGGGTAGGGCGTAGCTaGAGGGCCTCCTTGAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: YFIVGSSSFLWSCAWGYSRVGRS*RASLKY Trigger: GTACTTCAAGGAGGCCCTGCAGCTACGCCCTACCCG...AGAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR TCA 90 bp | TTAATATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTAGCTGCAGGGCCTCCTTaGAGTACTTGGGAAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LIFYCWILLLSLELCLGLAAGPP*STWEGG Trigger: TCCTCCTTCCCAAGTACTTCAAGGAGGCCCTGCAGC...TAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAATATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR CCA 90 bp | ATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCTGGCCATCAGTATTCCCTaGAGTCAGAATCACCCCATT | + |
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Preference number: 4 (lower is better) Translates to: ILLLDPPPFSGAVLGATLAISIP*SQNHPI Trigger: AATGGGGTGATTCTGACTCCAGGGAATACTGATGGC...CAGAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR TCA 90 bp | ATATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCCCAGGGGTCCATCGATaGACACAGCTATTTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: IFYCWILLLSLELCLGLLPGVHR*TQLFHN Trigger: ATTGTGAAATAGCTGTGTTCATCGATGGACCCCTGG...GAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR CCA 90 bp | TTAATATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTATCAGAATCACCCCATTaGCAGAGCGGAAGAAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LIFYCWILLLSLELCLGLSESPH*QSGRRV Trigger: TACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGA...TAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAATATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR CCA 90 bp | TTAATATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTAACAGCTATTTCACAATaGGACCGCATGCCACTGATG | + |
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Preference number: 4 (lower is better) Translates to: LIFYCWILLLSLELCLGLTAISQ*DRMPLM Trigger: CATCAGTGGCATGCGGTCCCATTGTGAAATAGCTGT...TAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAATATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS CCA 90 bp | GCCCCAGCTTCAAGGCCCCATGGCGCAGGGCATAGGACAGAGCCTTaGACAGCTGCACGTCTCGGTCCCAAGGTCACACGGTCAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: APASRPHGAGHRTEP*TAARLGPKVTRSAR Trigger: CCTGGCTGACCGTGTGACCTTGGGACCGAGACGTGCAGCTGTCCAAGGCTCTGTCCTATGCCCTGCGCCATGGGGCCTTGAAGCTGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000394547.7 ENST00000537907.1 ENST00000542040.1 |
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| CDS CCA 90 bp | TATCCTCCAGGGCTCGCCCTCGGGGTAAGTGCTGATCTGGCTGCTTaGCTGGAGGGGGCGGTCACCAGGCCTGGCCCAGACAAGAACTCT | + |
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Preference number: 5 (lower is better) Translates to: YPPGLALGVSADLAA*LEGAVTRPGPDKNS Trigger: AGAGTTCTTGTCTGGGCCAGGCCTGGTGACCGCCCCCTCCAGCCAAGCAGCCAGATCAGCACTTACCCCGAGGGCGAGCCCTGGAGGATA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS CCA 90 bp | CAGTGCTGGGATCCCCCAGCTGCAGGGCGAACCGCTGCTTCCTATTaGTGTCCACCACGCGCTGCACATCTTCAGCAGAGAAGCCGCGGA | + |
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Preference number: 5 (lower is better) Translates to: QCWDPPAAGRTAASY*CPPRAAHLQQRSRG Trigger: TCCGCGGCTTCTCTGCTGAAGATGTGCAGCGCGTGGTGGACACCAATAGGAAGCAGCGGTTCGCCCTGCAGCTGGGGGATCCCAGCACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000540472.1 ENST00000541278.5 ENST00000542040.1 ENST00000545812.1 ENST00000546089.5 |
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| CDS CCA 90 bp | GGGAGGGCACTGACCACTGATGATACCGGGGTCTCCAGGCAGTCCTaGGGCCAGGTGAATGTGCGTCCTTCCCTGGCAGGACAGGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: GRALTTDDTGVSRQS*GQVNVRPSLAGQAF Trigger: AAAGGCCTGTCCTGCCAGGGAAGGACGCACATTCACCTGGCCCCAGGACTGCCTGGAGACCCCGGTATCATCAGTGGTCAGTGCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 |
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| CDS CCA 90 bp | ATGGGACCGCATGCCACTGATGATACCGGGGTCTCCAGGCAGTCCTaGGGCCAGGTGAATGTGCGTCCTTCCCTGGCAGGACAGGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: MGPHATDDTGVSRQS*GQVNVRPSLAGQAF Trigger: AAAGGCCTGTCCTGCCAGGGAAGGACGCACATTCACCTGGCCCCAGGACTGCCTGGAGACCCCGGTATCATCAGTGGCATGCGGTCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000541278.5 ENST00000541928.1 ENST00000544286.5 ENST00000545812.1 ENST00000546089.5 ENST00000546133.5 |
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| CDS CCA 90 bp | AGGCAGCCATCAGGGAGGAGTCGCAGACAGGCTCACGTTTCTCTCTaGGCTCAAGCCCCAGCCTCCAAGGCCCCTACTTACCAGCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: RQPSGRSRRQAHVSL*AQAPASKAPTYQLP Trigger: TGGGAGCTGGTAAGTAGGGGCCTTGGAGGCTGGGGCTTGAGCCCAGAGAGAAACGTGAGCCTGTCTGCGACTCCTCCCTGATGGCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS TCA 90 bp | ATGCCACTGATGATACCGGGGTCTCCAGGCAGTCCTGGGGCCAGGTaGATGTGCGTCCTTCCCTGGCAGGACAGGCCTTTGAGTAGGATG | + |
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Preference number: 5 (lower is better) Translates to: MPLMIPGSPGSPGAR*MCVLPWQDRPLSRM Trigger: CATCCTACTCAAAGGCCTGTCCTGCCAGGGAAGGACGCACATTCACCTGGCCCCAGGACTGCCTGGAGACCCCGGTATCATCAGTGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000541278.5 ENST00000541928.1 ENST00000544286.5 ENST00000545812.1 ENST00000546089.5 ENST00000546133.5 |
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| CDS GCA 90 bp | CAGTGCTTCCAGAATGTACCATGGACTAGCATCGGGGGCAGGGCCTaGGGTGTCTCCAGGGGCATCAGCTCCAACTTAGGTACCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: QCFQNVPWTSIGGRA*GVSRGISSNLGTCR Trigger: CCTGCAGGTACCTAAGTTGGAGCTGATGCCCCTGGAGACACCGCAGGCCCTGCCCCCGATGCTAGTCCATGGTACATTCTGGAAGCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000317459.11 ENST00000394547.7 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000541278.5 ENST00000546089.5 |
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| CDS GCA 90 bp | GTCCTTCCCTGGCAGGACAGGCCTTTGAGTAGGATGGATGGCCAGTaGTTCCAGAATGTACCATGGACTAGCATCGGGGGCAGGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: VLPWQDRPLSRMDGQ*FQNVPWTSIGGRAC Trigger: GCAGGCCCTGCCCCCGATGCTAGTCCATGGTACATTCTGGAAGCACTGGCCATCCATCCTACTCAAAGGCCTGTCCTGCCAGGGAAGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000541278.5 ENST00000545812.1 ENST00000546089.5 |
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| CDS CCA 90 bp | AGGCCTTTGAGTAGGATGGATGGCCAGTGCTTCCAGAATGTACCATaGACTAGCATCGGGGGCAGGGCCTGCGGTGTCTCCAGGGGCATC | + |
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Preference number: 5 (lower is better) Translates to: RPLSRMDGQCFQNVP*TSIGGRACGVSRGI Trigger: GATGCCCCTGGAGACACCGCAGGCCCTGCCCCCGATGCTAGTCCATGGTACATTCTGGAAGCACTGGCCATCCATCCTACTCAAAGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000541278.5 ENST00000545812.1 ENST00000546089.5 |
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| CDS TCA 90 bp | CAGAGCGGAAGAAGGGTATTCCATCTGCTGACAGAGCCAGAGATGTaGCTCATGCCCTCCCCGAAGGCAAGGGCAGCTCCTGCTTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: QSGRRVFHLLTEPEM*LMPSPKARAAPALS Trigger: GGACAAAGCAGGAGCTGCCCTTGCCTTCGGGGAGGGCATGAGTCACATCTCTGGCTCTGTCAGCAGATGGAATACCCTTCTTCCGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000541928.1 |
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| CDS CCA 90 bp | ATCTGTGGGCAGGCAGGGTGCTCAGGAGCTAACCTTGCTCTGGACTaGGCCAGGGTTAACAGGGAGCCACAGGCAACCGAAACAAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: ICGQAGCSGANLALD*ARVNREPQATETKS Trigger: AGACTTTGTTTCGGTTGCCTGTGGCTCCCTGTTAACCCTGGCCCAGTCCAGAGCAAGGTTAGCTCCTGAGCACCCTGCCTGCCCACAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS TCA 90 bp | TTCCACGTCCCCATCCCTCCCAGAAAGTCACAAAGCCTCAGGAAGTaGGCGCTGGGTGGGAGTATACGGCTCATTAAGTTCACCACCCCC | + |
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Preference number: 5 (lower is better) Translates to: FHVPIPPRKSQSLRK*ALGGSIRLIKFTTP Trigger: GGGGGTGGTGAACTTAATGAGCCGTATACTCCCACCCAGCGCTCACTTCCTGAGGCTTTGTGACTTTCTGGGAGGGATGGGGACGTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539595.5 |
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| CDS TCA 90 bp | CAGAATCACCCCATTGGCAGAGCGGAAGAAGGGTATTCCATCTGCTaGCAGAGCCAGAGATGTGACTCATGCCCTCCCCGAAGGCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: QNHPIGRAEEGYSIC*QSQRCDSCPPRRQG Trigger: CCCTTGCCTTCGGGGAGGGCATGAGTCACATCTCTGGCTCTGTCAGCAGATGGAATACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000541928.1 |
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| CDS CCA 90 bp | GGGAGCCACAGGCAACCGAAACAAAGTCTGGGCTTGGAGATCGCTTaGGCATCCTCTGTGGGACCTTTAGAAAGTCTCCCCTTTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: GSHRQPKQSLGLEIA*ASSVGPLESLPFLG Trigger: GCCCAGAAAGGGGAGACTTTCTAAAGGTCCCACAGAGGATGCCCAAGCGATCTCCAAGCCCAGACTTTGTTTCGGTTGCCTGTGGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS TCA 90 bp | GGAGGAAGCCATCAGTATTCCCTGCCAGAGCCAGGGGTCCATCGATaGACACAGCTATTTCACAATGGGACCGCATGCCTGCAGAGACAG | + |
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Preference number: 5 (lower is better) Translates to: GGSHQYSLPEPGVHR*TQLFHNGTACLQRQ Trigger: CTGTCTCTGCAGGCATGCGGTCCCATTGTGAAATAGCTGTGTTCATCGATGGACCCCTGGCTCTGGCAGGGAATACTGATGGCTTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537907.1 |
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| CDS TCA 90 bp | TCCTGCTTTGTCCAGACTCACCTGCCAGAGCCAGGGGTCCATCGATaGACACAGCTATTTCACAATGGGACCGCATGCCTGCAGAGACAG | + |
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Preference number: 5 (lower is better) Translates to: SCFVQTHLPEPGVHR*TQLFHNGTACLQRQ Trigger: CTGTCTCTGCAGGCATGCGGTCCCATTGTGAAATAGCTGTGTTCATCGATGGACCCCTGGCTCTGGCAGGTGAGTCTGGACAAAGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536234.1 |
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| CDS CCA 90 bp | GAAGGAGGAAGCCATCAGTATTCCCTGGAGTCAGAATCACCCCATTaGCAGAGCGGAAGAAGGGTATTCCATCTGCCAGAGCCAGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: EGGSHQYSLESESPH*QSGRRVFHLPEPGV Trigger: GACCCCTGGCTCTGGCAGATGGAATACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGACTCCAGGGAATACTGATGGCTTCCTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536158.5 ENST00000539436.5 ENST00000539595.5 ENST00000544286.5 |
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| CDS CCA 90 bp | GGCCTCCTTGAAGTACTTGGGAAGGAGGAAGCCATCAGTATTCCCTaGAGTCAGAATCACCCCATTGGCAGAGCGGAAGAAGGGTATTCC | + |
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Preference number: 5 (lower is better) Translates to: GLLEVLGKEEAISIP*SQNHPIGRAEEGYS Trigger: GGAATACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGACTCCAGGGAATACTGATGGCTTCCTCCTTCCCAAGTACTTCAAGGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536158.5 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000541928.1 ENST00000544286.5 |
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| CDS CCA 90 bp | GAAGGAGGAAGCCATCAGTATTCCCTGGAGTCAGAATCACCCCATTaGCAGAGCGGAAGAAGGGTATTCCATCTGCTGACAGAGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: EGGSHQYSLESESPH*QSGRRVFHLLTEPE Trigger: CTCTGGCTCTGTCAGCAGATGGAATACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGACTCCAGGGAATACTGATGGCTTCCTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000541928.1 |
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| CDS-3UTR CAA 90 bp | ATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTACTCTGGTCAGAATCACCCCATaGGCAGAGCGGAAGAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: ILLLDPPPFSGAVLGATLVRITP*AERKKG Trigger: ACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGAC...CAGAGTAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR CAA 90 bp | TTAATATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTAAGCTGCAGGGCCTCCTaGAAGTACTTGGGAAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LIFYCWILLLSLELCLGLSCRAS*KYLGRR Trigger: CCTCCTTCCCAAGTACTTCAAGGAGGCCCTGCAGCT...TAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAATATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS-3UTR CAA 90 bp | TTAATATTTTATTGTTGGATCCTCCTCCTTTCTCTGGAGCTGTGCTTGGGGCTAGCCTCCTTGAAGTACTaGGGAAGGAGGAAGCCATCA | + |
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Preference number: 5 (lower is better) Translates to: LIFYCWILLLSLELCLGLASLKY*GRRKPS Trigger: TGATGGCTTCCTCCTTCCCAAGTACTTCAAGGAGGC...TAGCCCCAAGCACAGCTCCAGAGAAAGGAGGAGGATCCAACAATAAAATATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544286.5 |
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| CDS TCA 72 bp | ACCGTATCCTCCAGGGCTCGCCCTCGGGGTAAGTGCTaGTCTGGCTGCTTGGCTGGAGGGGGCGGTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: TVSSRARPRGKC*SGCLAGGGGHQ Trigger: CTGGTGACCGCCCCCTCCAGCCAAGCAGCCAGATCAGCACTTACCCCGAGGGCGAGCCCTGGAGGATACGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS CCA 72 bp | ACGCGCTGCACATCTTCAGCAGAGAAGCCGCGGAACTaGGGCAACTGCAGGAGGGTGCCCAGGGGCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: TRCTSSAEKPRN*GNCRRVPRGTK Trigger: CTTCGTGCCCCTGGGCACCCTCCTGCAGTTGCCCCAGTTCCGCGGCTTCTCTGCTGAAGATGTGCAGCGCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000540472.1 ENST00000541278.5 ENST00000542040.1 ENST00000545812.1 ENST00000546089.5 |
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| CDS CCA 72 bp | TCTCGCACTTGTCCCCTCACCCCGACCTGCAGGGAATaGCCCTGGTTGGCCCGGATGAGAAGGCCAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SRTCPLTPTCRE*PWLARMRRPVL Trigger: CAGCACTGGCCTTCTCATCCGGGCCAACCAGGGCCATTCCCTGCAGGTCGGGGTGAGGGGACAAGTGCGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542040.1 |
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| CDS GCA 72 bp | GTGACTCATGCCCTCCCCGAAGGCAAGGGCAGCTCCTaGTTTGTCCAGACTCACCTGCCAGAGCCAGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: VTHALPEGKGSS*FVQTHLPEPGV Trigger: GACCCCTGGCTCTGGCAGGTGAGTCTGGACAAAGCAGGAGCTGCCCTTGCCTTCGGGGAGGGCATGAGTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000541928.1 |
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| CDS CCA 72 bp | TCTGGCTGCTTGGCTGGAGGGGGCGGTCACCAGGCCTaGCCCAGACAAGAACTCTCCTCAGTCTGCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SGCLAGGGGHQA*PRQELSSVCCG Trigger: TCCACAGCAGACTGAGGAGAGTTCTTGTCTGGGCCAGGCCTGGTGACCGCCCCCTCCAGCCAAGCAGCCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS CAA 90 bp | GGCACGAAGCCATCTGTGGGCAGGCAGGGTGCTCAGGAGCTAACCTaGCTCTGGACTGGGCCAGGGTTAACAGGGAGCCACAGGCAACCG | + |
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Preference number: 6 (lower is better) Translates to: GTKPSVGRQGAQELT*LWTGPGLTGSHRQP Trigger: CGGTTGCCTGTGGCTCCCTGTTAACCCTGGCCCAGTCCAGAGCAAGGTTAGCTCCTGAGCACCCTGCCTGCCCACAGATGGCTTCGTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS TCA 72 bp | ATGATACCGGGGTCTCCAGGCAGTCCTGGGGCCAGGTaGATGTGCGTCCTTCCCTGGCAGGACAGGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: MIPGSPGSPGAR*MCVLPWQDRPL Trigger: CAAAGGCCTGTCCTGCCAGGGAAGGACGCACATTCACCTGGCCCCAGGACTGCCTGGAGACCCCGGTATCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000541278.5 ENST00000541928.1 ENST00000544286.5 ENST00000545812.1 ENST00000546089.5 ENST00000546133.5 |
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| CDS GCA 72 bp | GCGAACCGCTGCTTCCTATTGGTGTCCACCACGCGCTaGACATCTTCAGCAGAGAAGCCGCGGAACTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ANRCFLLVSTTR*TSSAEKPRNWG Trigger: GCCCCAGTTCCGCGGCTTCTCTGCTGAAGATGTGCAGCGCGTGGTGGACACCAATAGGAAGCAGCGGTTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000540472.1 ENST00000541278.5 ENST00000542040.1 ENST00000545812.1 ENST00000546089.5 |
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| CDS GCA 72 bp | GGGCTGGGGTGGTGGTTCTCACGGGTAGGGCGTAGCTaGAGGGCCTCCTTGAAGTACTTGGGAAGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLGWWFSRVGRS*RASLKYLGRRK Trigger: CTTCCTCCTTCCCAAGTACTTCAAGGAGGCCCTGCAGCTACGCCCTACCCGTGAGAACCACCACCCCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000544286.5 |
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| CDS CCA 72 bp | CATGCCACTGATGATACCGGGGTCTCCAGGCAGTCCTaGGGCCAGGTGAATGTGCGTCCTTCCCTGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HATDDTGVSRQS*GQVNVRPSLAG Trigger: TCCTGCCAGGGAAGGACGCACATTCACCTGGCCCCAGGACTGCCTGGAGACCCCGGTATCATCAGTGGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000541278.5 ENST00000541928.1 ENST00000544286.5 ENST00000545812.1 ENST00000546089.5 ENST00000546133.5 |
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| CDS CCA 72 bp | CTGACCACTGATGATACCGGGGTCTCCAGGCAGTCCTaGGGCCAGGTGAATGTGCGTCCTTCCCTGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LTTDDTGVSRQS*GQVNVRPSLAG Trigger: TCCTGCCAGGGAAGGACGCACATTCACCTGGCCCCAGGACTGCCTGGAGACCCCGGTATCATCAGTGGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 |
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| CDS CAA 72 bp | GGATCCCCCAGCTGCAGGGCGAACCGCTGCTTCCTATaGGTGTCCACCACGCGCTGCACATCTTCAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSPSCRANRCFL*VSTTRCTSSAE Trigger: CTCTGCTGAAGATGTGCAGCGCGTGGTGGACACCAATAGGAAGCAGCGGTTCGCCCTGCAGCTGGGGGATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000540472.1 ENST00000541278.5 ENST00000542040.1 ENST00000545812.1 ENST00000546089.5 |
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| CDS GCA 72 bp | TCTAGGCCTTGCTCTCCTCTGTGCATGGGGAGGAAGTaGACTCTGTGCCTTCCTCAGGGAGCGGTGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRPCSPLCMGRK*TLCLPQGAVEA Trigger: TGCCTCCACCGCTCCCTGAGGAAGGCACAGAGTGCACTTCCTCCCCATGCACAGAGGAGAGCAAGGCCTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS CCA 72 bp | ATCAGCTCCAACTTAGGTACCCCGACCTGCAGGGAATaGCCCTGGTTGGCCCGGATGAGAAGGCCAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ISSNLGTPTCRE*PWLARMRRPVL Trigger: CAGCACTGGCCTTCTCATCCGGGCCAACCAGGGCCATTCCCTGCAGGTCGGGGTACCTAAGTTGGAGCTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394546.6 ENST00000545812.1 |
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| CDS CCA 72 bp | TCAGGGAGGAGTCGCAGACAGGCTCACGTTTCTCTCTaGGCTCAAGCCCCAGCCTCCAAGGCCCCTACTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SGRSRRQAHVSL*AQAPASKAPTY Trigger: GTAAGTAGGGGCCTTGGAGGCTGGGGCTTGAGCCCAGAGAGAAACGTGAGCCTGTCTGCGACTCCTCCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS CAA 90 bp | AGGGGCTTTCGGGTAGGGCGTAGCTGCAGGGCCTCCTTGAAGTACTaGGGAAGGAGGAAGCCATCAGTATTCCCTGCCAGAGCCAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGFRVGRSCRASLKY*GRRKPSVFPARARG Trigger: ACCCCTGGCTCTGGCAGGGAATACTGATGGCTTCCTCCTTCCCAAGTACTTCAAGGAGGCCCTGCAGCTACGCCCTACCCGAAAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000537907.1 ENST00000546133.5 |
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| CDS GCA 72 bp | CCAGCCAAGGAAAGGGGCTTTCGGGTAGGGCGTAGCTaGAGGGCCTCCTTGAAGTACTTGGGAAGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PAKERGFRVGRS*RASLKYLGRRK Trigger: CTTCCTCCTTCCCAAGTACTTCAAGGAGGCCCTGCAGCTACGCCCTACCCGAAAGCCCCTTTCCTTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536158.5 ENST00000537907.1 ENST00000539436.5 ENST00000539595.5 ENST00000541928.1 ENST00000546133.5 |
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| CDS CCA 72 bp | AGTAGGATGGATGGCCAGTGCTTCCAGAATGTACCATaGACTAGCATCGGGGGCAGGGCCTGCGGTGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRMDGQCFQNVP*TSIGGRACGVS Trigger: GGAGACACCGCAGGCCCTGCCCCCGATGCTAGTCCATGGTACATTCTGGAAGCACTGGCCATCCATCCTACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000541278.5 ENST00000545812.1 ENST00000546089.5 |
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| CDS CAA 90 bp | CTGGGGTGGTGGTTCTCACGGGTAGGGCGTAGCTGCAGGGCCTCCTaGAAGTACTTGGGAAGGAGGAAGCCATCAGTATTCCCTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGWWFSRVGRSCRAS*KYLGRRKPSVFPGV Trigger: GACTCCAGGGAATACTGATGGCTTCCTCCTTCCCAAGTACTTCAAGGAGGCCCTGCAGCTACGCCCTACCCGTGAGAACCACCACCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000544286.5 |
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| CDS CAA 90 bp | GCCAAGGAAAGGGGCTTTCGGGTAGGGCGTAGCTGCAGGGCCTCCTaGAAGTACTTGGGAAGGAGGAAGCCATCAGTATTCCCTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: AKERGFRVGRSCRAS*KYLGRRKPSVFPGV Trigger: GACTCCAGGGAATACTGATGGCTTCCTCCTTCCCAAGTACTTCAAGGAGGCCCTGCAGCTACGCCCTACCCGAAAGCCCCTTTCCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536158.5 ENST00000539436.5 ENST00000539595.5 ENST00000541928.1 |
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| CDS CAA 90 bp | GCCAAGGAAAGGGGCTTTCGGGTAGGGCGTAGCTGCAGGGCCTCCTaGAAGTACTTGGGAAGGAGGAAGCCATCAGTATTCCCTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AKERGFRVGRSCRAS*KYLGRRKPSVFPAR Trigger: TCTGGCAGGGAATACTGATGGCTTCCTCCTTCCCAAGTACTTCAAGGAGGCCCTGCAGCTACGCCCTACCCGAAAGCCCCTTTCCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537907.1 ENST00000546133.5 |
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| CDS CAA 90 bp | AGGGGCTTTCGGGTAGGGCGTAGCTGCAGGGCCTCCTTGAAGTACTaGGGAAGGAGGAAGCCATCAGTATTCCCTGGAGTCAGAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: RGFRVGRSCRASLKY*GRRKPSVFPGVRIT Trigger: GGTGATTCTGACTCCAGGGAATACTGATGGCTTCCTCCTTCCCAAGTACTTCAAGGAGGCCCTGCAGCTACGCCCTACCCGAAAGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536158.5 ENST00000539436.5 ENST00000539595.5 ENST00000541928.1 |
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| CDS TCA 72 bp | GTCCAGACTCACCTGCCAGAGCCAGGGGTCCATCGATaGACACAGCTATTTCACAATGGGACCGCATGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VQTHLPEPGVHR*TQLFHNGTACL Trigger: CAGGCATGCGGTCCCATTGTGAAATAGCTGTGTTCATCGATGGACCCCTGGCTCTGGCAGGTGAGTCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536234.1 |
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| CDS TCA 72 bp | AGAAGGGTATTCCATCTGCTGACAGAGCCAGAGATGTaGCTCATGCCCTCCCCGAAGGCAAGGGCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRVFHLLTEPEM*LMPSPKARAAP Trigger: AGGAGCTGCCCTTGCCTTCGGGGAGGGCATGAGTCACATCTCTGGCTCTGTCAGCAGATGGAATACCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000541928.1 |
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| CDS TCA 72 bp | CCCATTGGCAGAGCGGAAGAAGGGTATTCCATCTGCTaGCAGAGCCAGAGATGTGACTCATGCCCTCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: PIGRAEEGYSIC*QSQRCDSCPPR Trigger: TCGGGGAGGGCATGAGTCACATCTCTGGCTCTGTCAGCAGATGGAATACCCTTCTTCCGCTCTGCCAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000541928.1 |
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| CDS TCA 72 bp | GTCCAGACTCACCTGCCAGAGCCAGGGGTCCATCGATaGACACAGCTATTTCACAATGGGACCGCATGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VQTHLPEPGVHR*TQLFHNGTACH Trigger: GTGGCATGCGGTCCCATTGTGAAATAGCTGTGTTCATCGATGGACCCCTGGCTCTGGCAGGTGAGTCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541928.1 |
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| CDS CAA 90 bp | GGAAGGAGGAAGCCATCAGTATTCCCTGGAGTCAGAATCACCCCATaGGCAGAGCGGAAGAAGGGTATTCCATCTGCCAGAGCCAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRRKPSVFPGVRITP*AERKKGIPSARARG Trigger: ACCCCTGGCTCTGGCAGATGGAATACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGACTCCAGGGAATACTGATGGCTTCCTCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536158.5 ENST00000539436.5 ENST00000539595.5 ENST00000544286.5 |
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| CDS CAA 90 bp | AGGGAGCCACAGGCAACCGAAACAAAGTCTGGGCTTGGAGATCGCTaGGGCATCCTCTGTGGGACCTTTAGAAAGTCTCCCCTTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: REPQATETKSGLGDR*GILCGTFRKSPLSG Trigger: CCCAGAAAGGGGAGACTTTCTAAAGGTCCCACAGAGGATGCCCAAGCGATCTCCAAGCCCAGACTTTGTTTCGGTTGCCTGTGGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS CAA 90 bp | TGGTTCTCACGGGTAGGGCGTAGCTGCAGGGCCTCCTTGAAGTACTaGGGAAGGAGGAAGCCATCAGTATTCCCTGGAGTCAGAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: WFSRVGRSCRASLKY*GRRKPSVFPGVRIT Trigger: GGTGATTCTGACTCCAGGGAATACTGATGGCTTCCTCCTTCCCAAGTACTTCAAGGAGGCCCTGCAGCTACGCCCTACCCGTGAGAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000544286.5 |
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| CDS TCA 72 bp | AAAGGGGCTTTCCTGCCAGAGCCAGGGGTCCATCGATaGACACAGCTATTTCACAATGGGACCGCATGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: KGAFLPEPGVHR*TQLFHNGTACH Trigger: GTGGCATGCGGTCCCATTGTGAAATAGCTGTGTTCATCGATGGACCCCTGGCTCTGGCAGGAAAGCCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000541278.5 ENST00000546089.5 |
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| CDS CAA 90 bp | CCAGGGTTAACAGGGAGCCACAGGCAACCGAAACAAAGTCTGGGCTaGGAGATCGCTTGGGCATCCTCTGTGGGACCTTTAGAAAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PGLTGSHRQPKQSLG*EIAWASSVGPLESL Trigger: GAGACTTTCTAAAGGTCCCACAGAGGATGCCCAAGCGATCTCCAAGCCCAGACTTTGTTTCGGTTGCCTGTGGCTCCCTGTTAACCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS TCA 72 bp | AGGGTATTCCATCTGCCAGAGCCAGGGGTCCATCGATaGACACAGCTATTTCACAATGGGACCGCATGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RVFHLPEPGVHR*TQLFHNGTACH Trigger: GTGGCATGCGGTCCCATTGTGAAATAGCTGTGTTCATCGATGGACCCCTGGCTCTGGCAGATGGAATACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000544286.5 |
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| CDS TCA 72 bp | AGGGTATTCCATCTGCCAGAGCCAGGGGTCCATCGATaGACACAGCTATTTCACAATGGGACCGCATGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RVFHLPEPGVHR*TQLFHNGTACL Trigger: CAGGCATGCGGTCCCATTGTGAAATAGCTGTGTTCATCGATGGACCCCTGGCTCTGGCAGATGGAATACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000536158.5 ENST00000539436.5 ENST00000539595.5 |
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| CDS TCA 72 bp | CATCAGTATTCCCTGCCAGAGCCAGGGGTCCATCGATaGACACAGCTATTTCACAATGGGACCGCATGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HQYSLPEPGVHR*TQLFHNGTACL Trigger: CAGGCATGCGGTCCCATTGTGAAATAGCTGTGTTCATCGATGGACCCCTGGCTCTGGCAGGGAATACTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537907.1 |
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| CDS TCA 72 bp | CATCAGTATTCCCTGCCAGAGCCAGGGGTCCATCGATaGACACAGCTATTTCACAATGGGACCGCATGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HQYSLPEPGVHR*TQLFHNGTACH Trigger: GTGGCATGCGGTCCCATTGTGAAATAGCTGTGTTCATCGATGGACCCCTGGCTCTGGCAGGGAATACTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546133.5 |
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| CDS CCA 72 bp | AGGCAACCGAAACAAAGTCTGGGCTTGGAGATCGCTTaGGCATCCTCTGTGGGACCTTTAGAAAGTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RQPKQSLGLEIA*ASSVGPLESLP Trigger: GGGGAGACTTTCTAAAGGTCCCACAGAGGATGCCCAAGCGATCTCCAAGCCCAGACTTTGTTTCGGTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS CAA 72 bp | CAGGCAACCGAAACAAAGTCTGGGCTTGGAGATCGCTaGGGCATCCTCTGTGGGACCTTTAGAAAGTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QATETKSGLGDR*GILCGTFRKSP Trigger: GGGAGACTTTCTAAAGGTCCCACAGAGGATGCCCAAGCGATCTCCAAGCCCAGACTTTGTTTCGGTTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000542040.1 |
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| CDS CAA 90 bp | GGAAGGAGGAAGCCATCAGTATTCCCTGGAGTCAGAATCACCCCATaGGCAGAGCGGAAGAAGGGTATTCCATCTGCTGACAGAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GRRKPSVFPGVRITP*AERKKGIPSADRAR Trigger: TCTGGCTCTGTCAGCAGATGGAATACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGACTCCAGGGAATACTGATGGCTTCCTCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000541928.1 |
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| CDS CCA 72 bp | AGCCATCAGTATTCCCTGGAGTCAGAATCACCCCATTaGCAGAGCGGAAGAAGGGTATTCCATCTGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SHQYSLESESPH*QSGRRVFHLPE Trigger: CTCTGGCAGATGGAATACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGACTCCAGGGAATACTGATGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536158.5 ENST00000539436.5 ENST00000539595.5 ENST00000544286.5 |
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| CDS CCA 72 bp | GAAGTACTTGGGAAGGAGGAAGCCATCAGTATTCCCTaGAGTCAGAATCACCCCATTGGCAGAGCGGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: EVLGKEEAISIP*SQNHPIGRAEE Trigger: TTCTTCCGCTCTGCCAATGGGGTGATTCTGACTCCAGGGAATACTGATGGCTTCCTCCTTCCCAAGTACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536158.5 ENST00000536234.1 ENST00000539436.5 ENST00000539595.5 ENST00000541928.1 ENST00000544286.5 |
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| CDS CCA 72 bp | AGCCATCAGTATTCCCTGGAGTCAGAATCACCCCATTaGCAGAGCGGAAGAAGGGTATTCCATCTGCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: SHQYSLESESPH*QSGRRVFHLLT Trigger: TGTCAGCAGATGGAATACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGACTCCAGGGAATACTGATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000541928.1 |
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| CDS CAA 72 bp | AAGCCATCAGTATTCCCTGGAGTCAGAATCACCCCATaGGCAGAGCGGAAGAAGGGTATTCCATCTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KPSVFPGVRITP*AERKKGIPSAR Trigger: TCTGGCAGATGGAATACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGACTCCAGGGAATACTGATGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000317459.11 ENST00000394546.6 ENST00000394547.7 ENST00000536158.5 ENST00000539436.5 ENST00000539595.5 ENST00000544286.5 |
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| CDS CAA 72 bp | AAGCCATCAGTATTCCCTGGAGTCAGAATCACCCCATaGGCAGAGCGGAAGAAGGGTATTCCATCTGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: KPSVFPGVRITP*AERKKGIPSAD Trigger: GTCAGCAGATGGAATACCCTTCTTCCGCTCTGCCAATGGGGTGATTCTGACTCCAGGGAATACTGATGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536234.1 ENST00000541928.1 |
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