RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104447

Ensembl transcript IDs: ENST00000220888.9, ENST00000395713.6, ENST00000395715.8, ENST00000422939.1, ENST00000451156.1, ENST00000517323.2, ENST00000518018.1, ENST00000519076.5, ENST00000519674.1, ENST00000519815.5, ENST00000520276.5, ENST00000640765.1

Found 932 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCCTCCAAAGTCCCGACGGGCGTCCTTCTATCTTCTTCTCATTTaGAGTTGCCTGCTGATAGAATTCCACCTAACAGTACCTACCTTT +
Preference number: 1 (lower is better)
Translates to: CPPKSRRASFYLLLI*SCLLIEFHLTVPTF
Trigger: AAAGGTAGGTACTGTTAGGTGGAATTCTATCAGCAGGCAACTGCAAATGAGAAGAAGATAGAAGGACGCCCGTCGGGACTTTGGAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR TCA 90 bp CAGCACTATCAGGAACATGTGAGCCCACTGTCTATGAAACAGTACTaGAAAACCAAAAGGAAGTGCTCTGCAAAGAATCCATGCCTCTGC +
Preference number: 1 (lower is better)
Translates to: QHYQEHVSPLSMKQY*KTKRKCSAKNPCLC
Trigger: GCAGAGGCATGGATTCTTTGCAGAGCACTTCCTTTTGGTTTTTCAGTACTGTTTCATAGACAGTGGGCTCACATGTTCCTGATAGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR TCA 90 bp ACTAAACAGGGCAGCAGTTCACAGGTCTCAAGACCGGTCACTTTGTaGTGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTTTAAT +
Preference number: 1 (lower is better)
Translates to: TKQGSSSQVSRPVTL*CFAATQQEANNYFN
Trigger: ATTAAAATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTCTTGAGACCTGTGAACTGCTGCCCTGTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR GCA 90 bp CGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCTCTaGCTAGGGTTTCATGATCATTATAAATTTAGGCAACAATTTATG +
Preference number: 1 (lower is better)
Translates to: RHFSFIALDLQFLLL*LGFHDHYKFRQQFM
Trigger: CATAAATTGTTGCCTAAATTTATAATGATCATGAAACCCTAGGCAGAGGAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR GCA 90 bp TTGGAGCTGTATTTGCATTGGATCATAATAGATTATGTGCACATGTaGAATTATAAACATAATGTGCTACCACAGGCTTCAACAAAGAGC +
Preference number: 1 (lower is better)
Translates to: LELYLHWIIIDYVHM*NYKHNVLPQASTKS
Trigger: GCTCTTTGTTGAAGCCTGTGGTAGCACATTATGTTTATAATTGCACATGTGCACATAATCTATTATGATCCAATGCAAATACAGCTCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR TCA 90 bp AACAAATTAAACCCACGGTCTGACATTTGTATCCATCTATGCTTTTaGATTGAGGGGATTCCTTTAGTTATAATGTGCCAAGTGAGATTA +
Preference number: 1 (lower is better)
Translates to: NKLNPRSDICIHLCF*IEGIPLVIMCQVRL
Trigger: TAATCTCACTTGGCACATTATAACTAAAGGAATCCCCTCAATTCAAAAGCATAGATGGATACAAATGTCAGACCGTGGGTTTAATTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCCTGAGCAGTTATGCTaGGGAGCTTTCCCTTCATGG +
Preference number: 2 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFPEQLC*GAFPSW
Trigger: CCATGAAGGGAAAGCTCCTCAGCATAACTGCTCAGG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCCTTGTAGCAAGCATTaGGGCTCGACTAACAGCACC +
Preference number: 2 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFPCSKH*GSTNST
Trigger: GGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGGGTTTTGGAACAAATaGTCCAATGGCCAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: ATICHVACCTLTKPNHSSGFWNK*SNGQSS
Trigger: ACTGGACTGGCCATTGGACCATTTGTTCCAAAACCC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR CAA 90 bp ATGCCCTCCAAAGTCCCGACGGGCGTCCTTCTATCTTCTTCTCATTaGCAGTTGCCTGCTGATAGAATTCCACCTAACAGTACCTACCTT +
Preference number: 2 (lower is better)
Translates to: MPSKVPTGVLLSSSH*QLPADRIPPNSTYL
Trigger: AAGGTAGGTACTGTTAGGTGGAATTCTATCAGCAGGCAACTGCAAATGAGAAGAAGATAGAAGGACGCCCGTCGGGACTTTGGAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGAGAGAAGACTAAATTaGGAGGGCGCCATTTTTCTT +
Preference number: 2 (lower is better)
Translates to: ATICHVACCTLTKPNHSSERRLN*EGAIFL
Trigger: AAGAAAAATGGCGCCCTCTCAATTTAGTCTTCTCTC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACCAGCAGGTTACCTTGTaGAGAAATGCCATGTGTTCT +
Preference number: 2 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDQQVTL*RNAMCS
Trigger: AGAACACATGGCATTTCTTCACAAGGTAACCTGCTG...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGCAGCAGGTTACCTTGTaGAGAAATGCCATGTGTTCT +
Preference number: 2 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPQQVTL*RNAMCS
Trigger: AGAACACATGGCATTTCTTCACAAGGTAACCTGCTG...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGACCTTAGACGCTGCCTaGCCACAAAGTTTGGAAATT +
Preference number: 2 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPTLDAA*PQSLEI
Trigger: AATTTCCAAACTTTGTGGTCAGGCAGCGTCTAAGGT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCAAGAATGAGAACGCATaGGCTGGTCCTGGCCTAAAG +
Preference number: 2 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLKNENA*AGPGLK
Trigger: CTTTAGGCCAGGACCAGCTCATGCGTTCTCATTCTT...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCACTTTGTGATGTTTTaGAGCCACACAACAGGAGGC +
Preference number: 2 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFHFVMF*SHTTGG
Trigger: GCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTTTCTTTCATTGCCCTaGACCTTCAATTTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: ATICHVACCTLTKPNHSSFLSLP*TFNFSS
Trigger: GGAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACCAATTTCTCCTCCTCTaGCTAGGGTTTCATGATCAT +
Preference number: 2 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDQFLLL*LGFHDH
Trigger: ATGATCATGAAACCCTAGGCAGAGGAGGAGAAATTG...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCACCATCTGTCATGTTaGTTGCTGCACTCTAACCAA +
Preference number: 2 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFHHLSC*LLHSNQ
Trigger: TTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCCGTAACCTTAGACGCTaGCTGACCACAAAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLRNLRR*LTTKFG
Trigger: TCCAAACTTTGTGGTCAGGCAGCGTCTAAGGTTACG...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACATTAAACCCACGGTCTaGCATTTGTATCCATCTATG +
Preference number: 2 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDIKPTV*HLYPSM
Trigger: CATAGATGGATACAAATGTCAGACCGTGGGTTTAAT...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCATCTGTCATGTTGCTTaGTGCACTCTAACCAAGCCT +
Preference number: 2 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLICHVA*CTLTKP
Trigger: AGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGAT...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTATGTACAGGCAGGGCTaGGTAAAAACAGCGTGCCAC +
Preference number: 2 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIMYRQG*VKTACH
Trigger: GTGGCACGCTGTTTTTACCCAGCCCTGCCTGTACAT...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGGGAGCTTTCCCTTCATaGATAGTTTTTACAAAGCCT +
Preference number: 2 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPGAFPS*IVFTKP
Trigger: AGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCC...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCACAACAGTCACGAACTaGTTGAACTCTACCTGCCAT +
Preference number: 2 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLTTVTN*LNSTCH
Trigger: ATGGCAGGTAGAGTTCAACCAGTTCGTGACTGTTGT...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACACCCAAACAAAACAATaGTACAAAGCAACTGCGAAT +
Preference number: 2 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDTQTKQ*YKATAN
Trigger: ATTCGCAGTTGCTTTGTATCATTGTTTTGTTTGGGT...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGATGTTGCTTAAGGATTaGCACGATGCATTCTGTTAT +
Preference number: 2 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPMLLKD*HDAFCY
Trigger: ATAACAGAATGCATCGTGGCAATCCTTAAGCAACAT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAATGTACAGGCAGGGCTaGGTAAAAACAGCGTGCCAC +
Preference number: 2 (lower is better)
Translates to: IILGTPMVPFNQGSQSALMYRQG*VKTACH
Trigger: GTGGCACGCTGTTTTTACCCAGCCCTGCCTGTACAT...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGCGTTCTGAGATGGGTTaGCTCTTTATGATTTTTCTA +
Preference number: 2 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPRSEMG*LFMIFL
Trigger: TAGAAAAATCATAAAGAGCCAACCCATCTCAGAACG...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCACCCAAACAAAACAATaGTACAAAGCAACTGCGAAT +
Preference number: 2 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFTQTKQ*YKATAN
Trigger: ATTCGCAGTTGCTTTGTATCATTGTTTTGTTTGGGT...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCTGGTTGAACTCTACCTaGCATCCAACTTTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLWLNST*HPTLRN
Trigger: GTTTCTTAAAGTTGGATGGCAGGTAGAGTTCAACCA...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR CAA 90 bp AGGGCAGCAGTTCACAGGTCTCAAGACCGGTCACTTTGTGATGTTTaGCAGCCACACAACAGGAGGCTAATAATTATTTTAATAGCCATA +
Preference number: 2 (lower is better)
Translates to: RAAVHRSQDRSLCDV*QPHNRRLIIILIAI
Trigger: TATGGCTATTAAAATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTCTTGAGACCTGTGAACTGCTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR CAA 90 bp TTGATACTCAGGTTGCATTTCAATTCCTCAATTTTCTCTTGTGCCTaGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGA +
Preference number: 2 (lower is better)
Translates to: LILRLHFNSSIFSCA*DSQQAFTLLAHQRR
Trigger: TCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAGAGAAAATTGAGGAATTGAAATGCAACCTGAGTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAAGACCGGTCACTTTGTaGTGTTTTGCAGCCACACAA +
Preference number: 2 (lower is better)
Translates to: IILGTPMVPFNQGSQSALRPVTL*CFAATQ
Trigger: TTGTGTGGCTGCAAAACATCACAAAGTGACCGGTCT...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGAGACCGGTCACTTTGTaGTGTTTTGCAGCCACACAA +
Preference number: 2 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVRPVTL*CFAATQ
Trigger: TTGTGTGGCTGCAAAACATCACAAAGTGACCGGTCT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTATCTGTCATGTTGCTTaGTGCACTCTAACCAAGCCT +
Preference number: 2 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIICHVA*CTLTKP
Trigger: AGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGAT...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTGGGTAAAAACAGCGTaGCACCATCTGTCATGTTGC +
Preference number: 2 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSWVKTA*HHLSCC
Trigger: GCAACATGACAGATGGTGGCACGCTGTTTTTACCCA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTACGTAACCTTAGACGCTaGCTGACCACAAAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: IILGTPMVPFNQGSQSALRNLRR*LTTKFG
Trigger: TCCAAACTTTGTGGTCAGGCAGCGTCTAAGGTTACG...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCGAACAAATGGTCCAATaGCCAGTCCAGTACTGCTTT +
Preference number: 2 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFEQMVQ*PVQYCF
Trigger: AAAGCAGTACTGGACTGGCCATTGGACCATTTGTTC...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTGAACAAATGGTCCAATaGCCAGTCCAGTACTGCTTT +
Preference number: 2 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIEQMVQ*PVQYCF
Trigger: AAAGCAGTACTGGACTGGCCATTGGACCATTTGTTC...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATATGTACAGGCAGGGCTaGGTAAAAACAGCGTGCCAC +
Preference number: 2 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHMYRQG*VKTACH
Trigger: GTGGCACGCTGTTTTTACCCAGCCCTGCCTGTACAT...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCTTAAGGCAAAAGGCTaGCATACAGCACAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVLKAKG*HTAQKQ
Trigger: CTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTACCTTAGACGCTGCCTaGCCACAAAGTTTGGAAATT +
Preference number: 2 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSTLDAA*PQSLEI
Trigger: AATTTCCAAACTTTGTGGTCAGGCAGCGTCTAAGGT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATACCTTAGACGCTGCCTaGCCACAAAGTTTGGAAATT +
Preference number: 2 (lower is better)
Translates to: YILVASIEARLTAPLTNYTLDAA*PQSLEI
Trigger: AATTTCCAAACTTTGTGGTCAGGCAGCGTCTAAGGT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTGTCATGTTGCTTGCTaGACTCTAACCAAGCCTAAC +
Preference number: 2 (lower is better)
Translates to: YILVASIEARLTAPLTNYCHVAC*TLTKPN
Trigger: GTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTATCTGTCATGTTGCTTaGTGCACTCTAACCAAGCCT +
Preference number: 2 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSICHVA*CTLTKP
Trigger: AGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGAT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTCACCATCTGTCATGTTaGTTGCTGCACTCTAACCAA +
Preference number: 2 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSHHLSC*LLHSNQ
Trigger: TTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTG...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCACCATCTGTCATGTTaGTTGCTGCACTCTAACCAA +
Preference number: 2 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVHHLSC*LLHSNQ
Trigger: TTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTTGGGTAAAAACAGCGTaGCACCATCTGTCATGTTGC +
Preference number: 2 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGWVKTA*HHLSCC
Trigger: GCAACATGACAGATGGTGGCACGCTGTTTTTACCCA...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATATCCATCTATGCTTTTaGATTGAGGGGATTCCTTTA +
Preference number: 2 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNIHLCF*IEGIPL
Trigger: TAAAGGAATCCCCTCAATTCAAAAGCATAGATGGAT...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTGGGTAAAAACAGCGTaGCACCATCTGTCATGTTGC +
Preference number: 2 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHWVKTA*HHLSCC
Trigger: GCAACATGACAGATGGTGGCACGCTGTTTTTACCCA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAATATCAGAGAGGGTGTaGATGTGTATGTACAGGCAG +
Preference number: 2 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSISERV*MCMYRQ
Trigger: CTGCCTGTACATACACATGCACACCCTCTCTGATAT...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATCTTGTTTGCTACATTTaGAAATGTAAACAGCTAGGC +
Preference number: 2 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNLVCYI*KCKQLG
Trigger: GCCTAGCTGTTTACATTTGCAAATGTAGCAAACAAG...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTTTCTTTCATTGCCCTaGACCTTCAATTTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: YILVASIEARLTAPLTNYFLSLP*TFNFSS
Trigger: GGAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR CAA 90 bp GAACTACAGAGTTATCAATTAGAGCTCTGTCCTTTTCTCATATACTaGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATG +
Preference number: 2 (lower is better)
Translates to: ELQSYQLELCPFLIY*ESCSVSLNPQRSEM
Trigger: CATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAAGTATATGAGAAAAGGACAGAGCTCTAATTGATAACTCTGTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGAGAGAAGACTAAATTaGGAGGGCGCCATTTTTCTT +
Preference number: 2 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGERRLN*EGAIFL
Trigger: AAGAAAAATGGCGCCCTCTCAATTTAGTCTTCTCTC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATATTAAACCCACGGTCTaGCATTTGTATCCATCTATG +
Preference number: 2 (lower is better)
Translates to: YILVASIEARLTAPLTNYIKPTV*HLYPSM
Trigger: CATAGATGGATACAAATGTCAGACCGTGGGTTTAAT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAATTAAACCCACGGTCTaGCATTTGTATCCATCTATG +
Preference number: 2 (lower is better)
Translates to: IILGTPMVPFNQGSQSALIKPTV*HLYPSM
Trigger: CATAGATGGATACAAATGTCAGACCGTGGGTTTAAT...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTGGCCAGTCCAGTACTaGTTTAGTATAATAATATGT +
Preference number: 2 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLWPVQY*FSIIIC
Trigger: ACATATTATTATACTAAAGCAGTACTGGACTGGCCA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTCAATTTCTCCTCCTCTaGCTAGGGTTTCATGATCAT +
Preference number: 2 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGQFLLL*LGFHDH
Trigger: ATGATCATGAAACCCTAGGCAGAGGAGGAGAAATTG...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACAATTTCTCCTCCTCTaGCTAGGGTTTCATGATCAT +
Preference number: 2 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKQFLLL*LGFHDH
Trigger: ATGATCATGAAACCCTAGGCAGAGGAGGAGAAATTG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTGTCATGTTGCTTGCTaGACTCTAACCAAGCCTAAC +
Preference number: 2 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHCHVAC*TLTKPN
Trigger: GTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGAAAACCAAAAGGAAGTaGTCTGCAAAGAATCCATGC +
Preference number: 2 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVKTKRK*SAKNPC
Trigger: GCATGGATTCTTTGCAGAGCACTTCCTTTTGGTTTT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCCGTTCTGAGATGGGTTaGCTCTTTATGATTTTTCTA +
Preference number: 2 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFRSEMG*LFMIFL
Trigger: TAGAAAAATCATAAAGAGCCAACCCATCTCAGAACG...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTGACATTACAAGCTATTaGATTCCCATCAAGAAAACC +
Preference number: 2 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSDITSY*IPIKKT
Trigger: GGTTTTCTTGATGGGAATTCAATAGCTTGTAATGTC...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATATCCATCTATGCTTTTaGATTGAGGGGATTCCTTTA +
Preference number: 2 (lower is better)
Translates to: YILVASIEARLTAPLTNYIHLCF*IEGIPL
Trigger: TAAAGGAATCCCCTCAATTCAAAAGCATAGATGGAT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCTTGTTTGCTACATTTaGAAATGTAAACAGCTAGGC +
Preference number: 2 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVLVCYI*KCKQLG
Trigger: GCCTAGCTGTTTACATTTGCAAATGTAGCAAACAAG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGGACATTACAAGCTATTaGATTCCCATCAAGAAAACC +
Preference number: 2 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLDITSY*IPIKKT
Trigger: GGTTTTCTTGATGGGAATTCAATAGCTTGTAATGTC...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTAATACCTGGCTAAAATaGAATCACTACAGAAGCATC +
Preference number: 2 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGNTWLK*NHYRSI
Trigger: GATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTGGCCAGTCCAGTACTaGTTTAGTATAATAATATGT +
Preference number: 2 (lower is better)
Translates to: YILVASIEARLTAPLTNYWPVQY*FSIIIC
Trigger: ACATATTATTATACTAAAGCAGTACTGGACTGGCCA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTACCTTTAGTTATAATGTaGCAAGTGAGATTAGTAACC +
Preference number: 2 (lower is better)
Translates to: IILGTPMVPFNQGSQSALPLVIM*QVRLVT
Trigger: GGTTACTAATCTCACTTGGCACATTATAACTAAAGG...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAAAAATGGAGTGCAAATaGGACTACAGAATGCAAAAA +
Preference number: 2 (lower is better)
Translates to: IILGTPMVPFNQGSQSALKMECK*DYRMQK
Trigger: TTTTTGCATTCTGTAGTCGCATTTGCACTCCATTTT...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGAATGTAAAAATGGAGTaGAAATGCGACTACAGAATG +
Preference number: 2 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVNVKME*KCDYRM
Trigger: CATTCTGTAGTCGCATTTGCACTCCATTTTTACATT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR GCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAAATGTAAAAATGGAGTaGAAATGCGACTACAGAATG +
Preference number: 2 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSNVKME*KCDYRM
Trigger: CATTCTGTAGTCGCATTTGCACTCCATTTTTACATT...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR CCA 72 bp AAAGAATCCATGCCTCTGCCCTTGGCCGTCTTTCTTTaGGAAAATAACAATGCCCTCCAAAGTCCCGACGGG +
Preference number: 3 (lower is better)
Translates to: KESMPLPLAVFL*ENNNALQSPDG
Trigger: CCCGTCGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAGGCATGGATTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGTCACTTTGTGATGTTTaGCAGCCACACAACAGGAGG +
Preference number: 3 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPSLCDV*QPHNRR
Trigger: CCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGA...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR GCA 72 bp ATGTGTATGTACAGGCAGGGCTGGGTAAAAACAGCGTaGCACCATCTGTCATGTTGCTTGCTGCACTCTAAC +
Preference number: 3 (lower is better)
Translates to: MCMYRQGWVKTA*HHLSCCLLHSN
Trigger: GTTAGAGTGCAGCAAGCAACATGACAGATGGTGGCACGCTGTTTTTACCCAGCCCTGCCTGTACATACACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR TCA 72 bp GGCAGCAGTTCACAGGTCTCAAGACCGGTCACTTTGTaGTGTTTTGCAGCCACACAACAGGAGGCTAATAAT +
Preference number: 3 (lower is better)
Translates to: GSSSQVSRPVTL*CFAATQQEANN
Trigger: ATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTCTTGAGACCTGTGAACTGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR GCA 72 bp TTCGCTACAACAGTCACGAACTGGTTGAACTCTACCTaGCATCCAACTTTAAGAAACGAAGACCCGGCACTG +
Preference number: 3 (lower is better)
Translates to: FATTVTNWLNST*HPTLRNEDPAL
Trigger: CAGTGCCGGGTCTTCGTTTCTTAAAGTTGGATGGCAGGTAGAGTTCAACCAGTTCGTGACTGTTGTAGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGAACAATTTATGGGTTTaGGAACAAATGGTCCAATGG +
Preference number: 3 (lower is better)
Translates to: ATICHVACCTLTKPNHSSNNLWV*EQMVQW
Trigger: CCATTGGACCATTTGTTCCAAAACCCATAAATTGTT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR CCA 72 bp CTAAAGTTGACCTCCTCTCAACTTAAGGCAAAAGGCTaGCATACAGCACAGAAGCAGACCACCAGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: LKLTSSQLKAKG*HTAQKQTTSFF
Trigger: AAAGAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGAGGAGGTCAACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCATCCATGCCTCTGCCCTaGGCCGTCTTTCTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSSMPLP*AVFLWE
Trigger: TTCCCAAAGAAAGACGGCCAAGGGCAGAGGCATGGA...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATGAAGGGAATTTCATGTaGGATAAGGCAGGCTCTATG +
Preference number: 3 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNEGNFM*DKAGSM
Trigger: CATAGAGCCTGCCTTATCCAACATGAAATTCCCTTC...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR TCA 72 bp AAAGTTATTCCTGCTTTTCTCCGGTGTAGGACAGAGTaGAGCTTACAGCTCTCCCTTTCCTTTCAAGAGAAC +
Preference number: 3 (lower is better)
Translates to: KVIPAFLRCRTE*SLQLSLSFQEN
Trigger: GTTCTCTTGAAAGGAAAGGGAGAGCTGTAAGCTTCACTCTGTCCTACACCGGAGAAAAGCAGGAATAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCGTCTGGCTATACATTTaGAGATGCATCCATCAAAAT +
Preference number: 3 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLVWLYI*RCIHQN
Trigger: ATTTTGATGGATGCATCTCAAAATGTATAGCCAGAC...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGTCACTTTGTGATGTTTaGCAGCCACACAACAGGAGG +
Preference number: 3 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVSLCDV*QPHNRR
Trigger: CCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGA...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATCATCTGTCATGTTGCTaGCTGCACTCTAACCAAGCC +
Preference number: 3 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHHLSCC*LHSNQA
Trigger: GGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATG...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGGAAGGGAATTTCATGTaGGATAAGGCAGGCTCTATG +
Preference number: 3 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLEGNFM*DKAGSM
Trigger: CATAGAGCCTGCCTTATCCAACATGAAATTCCCTTC...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTACTATCTTCTTCTCATTaGCAGTTGCCTGCTGATAGA +
Preference number: 3 (lower is better)
Translates to: IILGTPMVPFNQGSQSALLSSSH*QLPADR
Trigger: TCTATCAGCAGGCAACTGCAAATGAGAAGAAGATAG...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACTTCATGTGACATACTaGACATACTTCTGCCCTAGC +
Preference number: 3 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSLHVTY*TYFCPS
Trigger: GCTAGGGCAGAAGTATGTCAAGTATGTCACATGAAG...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTAACAATTTATGGGTTTaGGAACAAATGGTCCAATGG +
Preference number: 3 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIINNLWV*EQMVQW
Trigger: CCATTGGACCATTTGTTCCAAAACCCATAAATTGTT...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR TCA 72 bp CTGTCAGTCTGTGGTAACGTAACCTTAGACGCTGCCTaGCCACAAAGTTTGGAAATTATATTTAACCAAAAG +
Preference number: 3 (lower is better)
Translates to: LSVCGNVTLDAA*PQSLEIIFNQK
Trigger: CTTTTGGTTAAATATAATTTCCAAACTTTGTGGTCAGGCAGCGTCTAAGGTTACGTTACCACAGACTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR GCA 72 bp TCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCTCTaGCTAGGGTTTCATGATCATTATAAATTTAGGCAA +
Preference number: 3 (lower is better)
Translates to: SFIALDLQFLLL*LGFHDHYKFRQ
Trigger: TTGCCTAAATTTATAATGATCATGAAACCCTAGGCAGAGGAGGAGAAATTGAAGGTCCAGGGCAATGAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR CCA 72 bp AGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTaGCTCTTTATGATTTTTCTATCCCAAACAACAGAA +
Preference number: 3 (lower is better)
Translates to: SVSLNPQRSEMG*LFMIFLSQTTE
Trigger: TTCTGTTGTTTGGGATAGAAAAATCATAAAGAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR TCA 72 bp AACCCACGGTCTGACATTTGTATCCATCTATGCTTTTaGATTGAGGGGATTCCTTTAGTTATAATGTGCCAA +
Preference number: 3 (lower is better)
Translates to: NPRSDICIHLCF*IEGIPLVIMCQ
Trigger: TTGGCACATTATAACTAAAGGAATCCCCTCAATTCAAAAGCATAGATGGATACAAATGTCAGACCGTGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR-3UTR CAA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAGATGGAATATCTTTGTaGCATACGTACACTGTAGAA +
Preference number: 3 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSDGISL*HTYTVE
Trigger: TTCTACAGTGTACGTATGCAACAAAGATATTCCATC...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR TCA 72 bp AATTATTTAATGTTCAGTTATTTAGCCCTATTTCCCTaGGCAGTTATGCTGAGGAGCTTTCCCTTCATGGAT +
Preference number: 3 (lower is better)
Translates to: NYLMFSYLALFP*AVMLRSFPFMD
Trigger: ATCCATGAAGGGAAAGCTCCTCAGCATAACTGCTCAGGGAAATAGGGCTAAATAACTGAACATTAAATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR CCA 72 bp GGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATaGCCAGTCCAGTACTGCTTTAGTATAATAATATGT +
Preference number: 3 (lower is better)
Translates to: GNNLWVLEQMVQ*PVQYCFSIIIC
Trigger: ACATATTATTATACTAAAGCAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR TCA 72 bp GTTCATCACACACAAGAAAGAAATACCTGGCTAAAATaGAATCACTACAGAAGCATCGAGGACATTGTTTTT +
Preference number: 3 (lower is better)
Translates to: VHHTQERNTWLK*NHYRSIEDIVF
Trigger: AAAAACAATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGTGTGTGATGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGGTGCCCGGTGCCGGGTaGGAGAGGGGAGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPVPGAG*ERGGGV
Trigger: AACACCCCCTCCCCTCTCCCACCCGGCACCGGGCAC...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR GCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACCCCGATGCAGGATACTaGTGGGGGAGGGCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDPDAGY*WGRAPD
Trigger: GTCTGGGGCCCTCCCCCAGCAGTATCCTGCATCGGG...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGCTTCTCTCCGCCAGCTaGCGCCCCCTGCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPLLSAS*RPLQES
Trigger: GGATTCCTGCAGGGGGCGCCAGCTGGCGGAGAGAAG...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTGGATTAAGGCCGCCTaGCTGCACTGCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSWIKAA*LHCSVL
Trigger: CAGCACGGAGCAGTGCAGTCAGGCGGCCTTAATCCA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGGCTTGCTTGGGTGTATaGCGGACTCCCCCGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPACLGV*RTPPQD
Trigger: ATCCTGCGGGGGAGTCCGTCATACACCCAAGCAAGC...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGAGCCCCAGGCTTGCTTaGGTGTATGACGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPSPRLA*VYDGLP
Trigger: GGGGAGTCCGTCATACACCCAAGCAAGCCTGGGGCT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGAGCTACGCGACAGGTaGGATCAGAATAAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSELRDR*DQNKAR
Trigger: ACGGGCCTTATTCTGATCTCACCTGTCGCGTAGCTC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGAGTCCCCTGAGGGGGTaGAGGCCATATCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPSPLRG*RPYLEG
Trigger: ACCCTCAAGATATGGCCTGCACCCCCTCAGGGGACT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTCCTTGACAGACTGCTaGCCATCCGATCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSSLTDC*PSDPCR
Trigger: CCTGCAAGGATCGGATGGGCAGCAGTCTGTCAAGGA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGGGCTTCCATTGACTTaGTCCTCATTGCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSGLPLT*SSLLPL
Trigger: GAGGGGCAGCAATGAGGAGCAAGTCAATGGAAGCCC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGGCACCGTTTGCAGTTaGCCCAGGTCTGGAATGCTT +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSGTVCS*PRSGML
Trigger: AAGCATTCCAGACCTGGGCCAACTGCAAACGGTGCC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCTAACGGGCTTCCATTaGCTTGCTCCTCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSLTGFH*LAPHCC
Trigger: GCAGCAATGAGGAGCAAGTCAATGGAAGCCCGTTAG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCGGTGTAGGACAGAGTaGAGCTTACAGCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSRCRTE*SLQLSL
Trigger: AAGGGAGAGCTGTAAGCTTCACTCTGTCCTACACCG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGGCTTGACCACTCTGTaGTTGCCCTGTTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSGLTTL*LPCFLC
Trigger: ACAGAGGAAACAGGGCAAGCACAGAGTGGTCAAGCC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACCTCTGGAGACAGAGGTaGCGGGTCTGGGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDLWRQR*RVWVVI
Trigger: AATGACAACCCAGACCCGGCACCTCTGTCTCCAGAG...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCCCCCGCAGGATGTCTaGCCCTCTCCAAGTCACATT +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFPPQDV*PSPSHI
Trigger: AATGTGACTTGGAGAGGGGCAGACATCCTGCGGGGG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGTTGTCTGCTCTTGGGTaGCAGACACAGGCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPLSALG*QTQASA
Trigger: TGCTGACGCCTGTGTCTGGCACCCAAGAGCAGACAA...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCCCGATGCAGGATACTaGTGGGGGAGGGCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLPDAGY*WGRAPD
Trigger: GTCTGGGGCCCTCCCCCAGCAGTATCCTGCATCGGG...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCTTGTTTTCTCCCGATaGAGGATACTGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSLVFSR*RILLGE
Trigger: CTCCCCCAGCAGTATCCTGCATCGGGAGAAAACAAG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCTTGGAGGCACCGTTTaGAGTTGGCCCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFLGGTV*SWPRSG
Trigger: TCCAGACCTGGGCCAACTGCAAACGGTGCCTCCAAG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTCCAAGGTGCTTTTCTaGGCTGCAAAGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSSKVLF*AAKSSG
Trigger: CCCAGAGGACTTTGCAGCCCAGAAAAGCACCTTGGA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCAGCCCCAGGCTTGCTTaGGTGTATGACGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLSPRLA*VYDGLP
Trigger: GGGGAGTCCGTCATACACCCAAGCAAGCCTGGGGCT...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACCCTGAGCAGTTATGCTaGGGAGCTTTCCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDPEQLC*GAFPSW
Trigger: CCATGAAGGGAAAGCTCCTCAGCATAACTGCTCAGG...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACCGGTGTAGGACAGAGTaGAGCTTACAGCTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDRCRTE*SLQLSL
Trigger: AAGGGAGAGCTGTAAGCTTCACTCTGTCCTACACCG...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGAGGGTCATCTGCCTCTaGTCTTTGCGGAGACTTCAA +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSRVICL*SLRRLQ
Trigger: TTGAAGTCTCCGCAAAGAGCAGAGGCAGATGACCCT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACGGTGCTTTTCTGGGCTaGAAAGTCCTCTGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDGAFLG*KVLWDR
Trigger: TCTGTCCCAGAGGACTTTGCAGCCCAGAAAAGCACC...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCCAGCTGGCGCCCCCTaGAGGAATCCCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLPAGAP*RNPLVS
Trigger: GGAAACCAAGGGATTCCTGCAGGGGGCGCCAGCTGG...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACTCTGCAAAGAATCCATaGCTCTGCCCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDSAKNP*LCPWPS
Trigger: AGACGGCCAAGGGCAGAGGCATGGATTCTTTGCAGA...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGTCTGCAAAGAATCCATaGCTCTGCCCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPSAKNP*LCPWPS
Trigger: AGACGGCCAAGGGCAGAGGCATGGATTCTTTGCAGA...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTCGGCAGCCCGAAAGATaGTGGCGCGGCGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSRQPER*WRGGQS
Trigger: GCTTTGGCCGCCGCGCCACCATCTTTCGGGCTGCCG...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220888.9
ENST00000395715.8
CDS-3UTR CCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTACGGCAGCCCGAAAGATaGTGGCGCGGCGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALRQPER*WRGGQS
Trigger: GCTTTGGCCGCCGCGCCACCATCTTTCGGGCTGCCG...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGGCTGCAAAGTCCTCTaGGACAGAATGGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSGCKVL*DRMDSV
Trigger: AACACTGTCCATTCTGTCCCAGAGGACTTTGCAGCC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCGGGCGGCCTCCACATTaGGACTATCCCTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFGRPPH*DYPLES
Trigger: AGACTCTAAGGGATAGTCCCAATGTGGAGGCCGCCC...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACCCTGCAGGAATCCCTTaGTTTCCACAGCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDPAGIP*FPQPSH
Trigger: ATGGCTTGGCTGTGGAAACCAAGGGATTCCTGCAGG...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCCTTCGTTTTCTCCTTaGAGGCACCGTTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSPSFSP*RHRLQL
Trigger: CAACTGCAAACGGTGCCTCCAAGGAGAAAACGAAGG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTGGATTAAGGCCGCCTaGCTGCACTGCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLWIKAA*LHCSVL
Trigger: CAGCACGGAGCAGTGCAGTCAGGCGGCCTTAATCCA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGTTAGCCCTATTTCCCTaGGCAGTTATGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPLALFP*AVMLRS
Trigger: GCTCCTCAGCATAACTGCTCAGGGAAATAGGGCTAA...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGCAGTCACGAACTGGTTaGACTCTACCTGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPQSRTG*TLPAIQ
Trigger: TTGGATGGCAGGTAGAGTTCAACCAGTTCGTGACTG...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTATCCTCGGCTCCCTTaGTGGAGAAGTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSYPRLP*WRSPSF
Trigger: AAAAGAAGGACTTCTCCAGCAAGGGAGCCGAGGATA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCTTGTCTGCTCTTGGGTaGCAGACACAGGCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLLSALG*QTQASA
Trigger: TGCTGACGCCTGTGTCTGGCACCCAAGAGCAGACAA...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGGGCCCAGGTCTGGAATaGTTGATCGCCAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPGPGLE*LIAKSR
Trigger: TCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCC...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTGGGTAAAAACAGCGTaGCACCATCTGTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSWVKTA*HHLSCC
Trigger: GCAACATGACAGATGGTGGCACGCTGTTTTTACCCA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTTGGCACTCCTATGGTaGCTTTCAACCAAGGATCTC +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSLALLW*LSTKDL
Trigger: GAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCCATATTACTCTGCATaGTGGTGCCTAGTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFPYYSA*WCLVCA
Trigger: GGCGCAGACTAGGCACCAGCATGCAGAGTAATATGG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640765.1
CDS-3UTR GCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACCGGACCATATTACTCTaGATGCTGGTGCCTAGTCTG +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDRTILL*MLVPSL
Trigger: CAGACTAGGCACCAGCATGCAGAGTAATATGGTCCG...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640765.1
CDS-3UTR CCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTCAGCCCGAAAGATGGTaGCGCGGCGGCCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIQPERW*RGGQSH
Trigger: ATGGCTTTGGCCGCCGCGCCACCATCTTTCGGGCTG...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR CCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCGCTCAGCATCTTGCCTaGTGCGGTTATGCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFAQHLA*CGYAVL
Trigger: TAGGACTGCATAACCGCACCAGGCAAGATGCTGAGC...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGAATCGAGGGGCTTTATaGGCACTGAGTACCCAACAG +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPNRGAL*ALSTQQ
Trigger: CTGTTGGGTACTCAGTGCCCATAAAGCCCCTCGATT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGAGCCCCAGGCTTGCTTaGGTGTATGACGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLSPRLA*VYDGLP
Trigger: GGGGAGTCCGTCATACACCCAAGCAAGCCTGGGGCT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCTTCTCTCCGCCAGCTaGCGCCCCCTGCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVLLSAS*RPLQES
Trigger: GGATTCCTGCAGGGGGCGCCAGCTGGCGGAGAGAAG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGATGCAGGATACTGCTaGGGGAGGGCCCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLDAGYC*GRAPDF
Trigger: GAAGTCTGGGGCCCTCCCCCAGCAGTATCCTGCATC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCCGGACCATATCTGTTaGTTAATCGTCAAGAACACC +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSPDHIC*LIVKNT
Trigger: GGTGTTCTTGACGATTAATCAACAGATATGGTCCGG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220888.9
CDS-3UTR TCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCCAGAATCACTGGATTaGAGTGCAGGGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFPESLD*SAGMDL
Trigger: CAAGTCCATCCCTGCACTTCAATCCAGTGATTCTGG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGTGTCATCTCCTGCTTTaGCTGTTATCTTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPCHLLL*LLSCPA
Trigger: GGCAGGACAAGATAACAGTCAAAGCAGGAGATGACA...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGTGCTCCAGTAGTGACTaGGTATCGGCAGCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPCSSSD*VSAAVK
Trigger: TTTTACAGCTGCCGATACTCAGTCACTACTGGAGCA...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCTCCTGTTCCTGGCAGTaGACAGTGTTGAAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLSCSWQ*TVLKCS
Trigger: GGAGCACTTCAACACTGTTCACTGCCAGGAACAGGA...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGCCCTCGCCTTCACTTaGAACGTTTCTCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLALAFT*NVSQRG
Trigger: CCCCCTCTGAGAAACGTTGCAAGTGAAGGCGAGGGC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTTGTTTGACATCCGATaGTTGGGACTCATGCACACT +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSLFDIR*LGLMHT
Trigger: AGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCCCCCGCAGGATGTCTaGCCCTCTCCAAGTCACATT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLPPQDV*PSPSHI
Trigger: AATGTGACTTGGAGAGGGGCAGACATCCTGCGGGGG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATCCCCCGCAGGATGTCTaGCCCTCTCCAAGTCACATT +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNPPQDV*PSPSHI
Trigger: AATGTGACTTGGAGAGGGGCAGACATCCTGCGGGGG...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACCCGATGCAGGATACTaGTGGGGGAGGGCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSPDAGY*WGRAPD
Trigger: GTCTGGGGCCCTCCCCCAGCAGTATCCTGCATCGGG...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCAGAGGCCACACGCGTTaGATACATATCCGCCATTTG +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFRGHTR*IHIRHL
Trigger: CAAATGGCGGATATGTATGCAACGCGTGTGGCCTCT...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCTTGGAGGCACCGTTTaGAGTTGGCCCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLLGGTV*SWPRSG
Trigger: TCCAGACCTGGGCCAACTGCAAACGGTGCCTCCAAG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCTTGTCCGTGCAAAGATaGTGGCATATGCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFLSVQR*WHMLHW
Trigger: CCAGTGCAGCATATGCCAGCATCTTTGCACGGACAA...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCAATAGAGCAAGGATGTaGCCGGTGCCGGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLNRARM*PVPGGR
Trigger: TCTCCCACCCGGCACCGGGCACATCCTTGCTCTATT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGTGCTGGTGCCTAGTCTaGGCCCCGCTTGTCACGAGC +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVCWCLV*APLVTS
Trigger: GCTCGTGACAAGCGGGGCGCAGACTAGGCACCAGCA...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640765.1
CDS-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTACTTGGTGTTCCCTTaGCAATCTGGTGTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSYLVFP*QSGVFR
Trigger: ACGGAAAACACCAGATTGCCAAGGGAACACCAAGTA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCAATCGAGGGGCTTTATaGGCACTGAGTACCCAACAG +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFNRGAL*ALSTQQ
Trigger: CTGTTGGGTACTCAGTGCCCATAAAGCCCCTCGATT...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGACCAGTAGTAACTGGTaGCCTCTGTACCATTTTGTC +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSTSSNW*PLYHFV
Trigger: GACAAAATGGTACAGAGGCCACCAGTTACTACTGGT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGCAGGGCCATGGCTTTTaGAATATCGGAAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPQGHGF*NIGSHR
Trigger: TCTGTGACTTCCGATATTCCAAAAGCCATGGCCCTG...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTCTTCTCTCCGCCAGCTaGCGCCCCCTGCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGLLSAS*RPLQES
Trigger: GGATTCCTGCAGGGGGCGCCAGCTGGCGGAGAGAAG...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACCTATGCAGGCCCCTCTaGATATGTGTTGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDLCRPL*ICVVKS
Trigger: TGACTTCACAACACATATCCAGAGGGGCCTGCATAG...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGAAGCTTTCACCTTACTaGCTCACCAAAGACGACTTG +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSKLSPY*LTKDDL
Trigger: CAAGTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCGTGCAGGCCATATCTTaGGGGTCATCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLVQAIS*GSSASA
Trigger: AGCAGAGGCAGATGACCCTCAAGATATGGCCTGCAC...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATGTGCAGGCCATATCTTaGGGGTCATCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNVQAIS*GSSASA
Trigger: AGCAGAGGCAGATGACCCTCAAGATATGGCCTGCAC...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGAACTGCACCATGTTATaGAGGGCCAAGATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPNCTML*RAKILL
Trigger: CAGCAAAATCTTGGCCCTTCATAACATGGTGCAGTT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGAGTCTTTGGAATGGCTaGACTGCACCATGTTATGAA +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSSLWNG*TAPCYE
Trigger: TTCATAACATGGTGCAGTTCAGCCATTCCAAAGACT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTGATGGCACTGATGTTTaGCTCGCGAGCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIDGTDV*LASFQP
Trigger: CGGCTGGAAGCTCGCGAGTCAAACATCAGTGCCATC...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACTCCGATCCTTGCAGGTaGTTTGCTTCTTGTTTGACA +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDSDPCR*FASCLT
Trigger: TGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGA...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCTGCTCCAGTAGTGACTaGGTATCGGCAGCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFCSSSD*VSAAVK
Trigger: TTTTACAGCTGCCGATACTCAGTCACTACTGGAGCA...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCGATCTGTGGGGTCGTTaGCGTAGTAACCATATCCAC +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLDLWGR*RSNHIH
Trigger: GTGGATATGGTTACTACGGCAACGACCCCACAGATC...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCCAGCATCTTGCCTGGTaGGGTTATGCAGTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLQHLAW*GYAVLS
Trigger: ACTTAGGACTGCATAACCGCACCAGGCAAGATGCTG...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGACTGTTATCTTGTCCTaGCATTTTCCCAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSTVILS*HFPKSP
Trigger: TGGAGACTTGGGAAAATGGCAGGACAAGATAACAGT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTTTAAGGCCGCCTGACTaGACTGCTCCGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIILRPPD*TAPCCL
Trigger: CAAGCAGCACGGAGCAGTGCAGTCAGGCGGCCTTAA...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTCCTTGACAGACTGCTaGCCATCCGATCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLSLTDC*PSDPCR
Trigger: CCTGCAAGGATCGGATGGGCAGCAGTCTGTCAAGGA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTTGTCTGCTCTTGGGTaGCAGACACAGGCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLLSALG*QTQASA
Trigger: TGCTGACGCCTGTGTCTGGCACCCAAGAGCAGACAA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTCCAGCTGGCGCCCCCTaGAGGAATCCCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGPAGAP*RNPLVS
Trigger: GGAAACCAAGGGATTCCTGCAGGGGGCGCCAGCTGG...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCTGCTCAGCCTGAAGTaGCTCTGGGTTAAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLLLSLK*LWVKAL
Trigger: AAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAG...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCTGCTCAGCCTGAAGTaGCTCTGGGTTAAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLLLSLK*LWVKAL
Trigger: AAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTCTTGGAGGCACCGTTTaGAGTTGGCCCAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIILGGTV*SWPRSG
Trigger: TCCAGACCTGGGCCAACTGCAAACGGTGCCTCCAAG...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCAAAGATGCTGGCATATaGTGCACTGGAAAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFKDAGI*CTGKVH
Trigger: GTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTT...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACCAAAAGGAAGTGCTCTaGAAAGAATCCATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDQKEVL*KESMPL
Trigger: CAGAGGCATGGATTCTTTGCAGAGCACTTCCTTTTG...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCAGGGCCATGGCTTTTaGAATATCGGAAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFQGHGF*NIGSHR
Trigger: TCTGTGACTTCCGATATTCCAAAAGCCATGGCCCTG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACTTGACATCCGATGCTTaGGACTCATGCACACTTTCA +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDLTSDA*DSCTLS
Trigger: TGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAA...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGCACACTCTCAGAAACTaGCTCTCCCATTTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPHTLRN*LSHFRV
Trigger: GACTCTAAAATGGGAGAGCCAGTTTCTGAGAGTGTG...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGGGCGGCCTCCACATTaGGACTATCCCTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLGRPPH*DYPLES
Trigger: AGACTCTAAGGGATAGTCCCAATGTGGAGGCCGCCC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAATAGGTCGCGCCAGATaGGCGGCCTCCACATTGGGA +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALIGRAR*AASTLG
Trigger: TCCCAATGTGGAGGCCGCCCATCTGGCGCGACCTAT...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTGATGCAGGATACTGCTaGGGGAGGGCCCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSDAGYC*GRAPDF
Trigger: GAAGTCTGGGGCCCTCCCCCAGCAGTATCCTGCATC...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCCAAAAAGTGGGTACTaGTACTTTTCAATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSPKSGY*YFSIGL
Trigger: CAGCCCTATTGAAAAGTACCAGTACCCACTTTTTGG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCTGGCATATGCTGCACTaGAAAGGTCCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLWHMLH*KGPLSP
Trigger: TGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCA...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATTATTACTCTGCATGCTaGTGCCTAGTCTGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNYYSAC*CLVCAP
Trigger: CGGGGCGCAGACTAGGCACCAGCATGCAGAGTAATA...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640765.1
CDS-3UTR TCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCTCTGCAGCATCACTCTaGTCCGTATTTTCTGACATC +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFSAASL*SVFSDI
Trigger: GATGTCAGAAAATACGGATCAGAGTGATGCTGCAGA...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCTATGTTCCTCCTTATaGTTTAGTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSLCSSL*FSSAAS
Trigger: TGATGCTGCAGAACTAAATCATAAGGAGGAACATAG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCAAAACACAGAACGGTTaGCCTTCTGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFKTQNG*PSGSLW
Trigger: CCAAAGACTTCCAGAAGGTCAACCGTTCTGTGTTTT...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACAATGAATGTTCCACCTaGAGTCACCTGCACATCATA +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDNECST*SHLHII
Trigger: TATGATGTGCAGGTGACTTCAGGTGGAACATTCATT...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTTGGATTAAGGCCGCCTaGCTGCACTGCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGWIKAA*LHCSVL
Trigger: CAGCACGGAGCAGTGCAGTCAGGCGGCCTTAATCCA...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCGATTTGCTTCTTGTTTaGCATCCGATGCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFDLLLV*HPMLGT
Trigger: AGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATC...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGCTTGCTTGGGTGTATaGCGGACTCCCCCGCAGGAT +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGACLGV*RTPPQD
Trigger: ATCCTGCGGGGGAGTCCGTCATACACCCAAGCAAGC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGATGGCTTTTAGTCAATaGACCCTGGGCTTCGTATTT +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPMAFSQ*TLGFVF
Trigger: AAATACGAAGCCCAGGGTTCATTGACTAAAAGCCAT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGACCAGGACTGGCTGCTaGGCAGAATGGCTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLTRTGC*AEWLLV
Trigger: GACTAAAAGCCATTCTGCTCAGCAGCCAGTCCTGGT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCCCCTTCAGATACGGATaGACTATTTCCTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLPFRYG*TISWIS
Trigger: GGAGATCCAGGAAATAGTTCATCCGTATCTGAAGGG...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATAGGGCTGCCTGGTGGTaGATAATTTGGGTGTTTCGC +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNRAAWW*IIWVFR
Trigger: GCGAAACACCCAAATTATTCACCACCAGGCAGCCCT...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCCTTGTAGCAAGCATTaGGGCTCGACTAACAGCACC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLPCSKH*GSTNST
Trigger: GGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGG...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCCTTGTAGCAAGCATTaGGGCTCGACTAACAGCACC +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLPCSKH*GSTNST
Trigger: GGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATGCCCTCGCCTTCACTTaGAACGTTTCTCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYALAFT*NVSQRG
Trigger: CCCCCTCTGAGAAACGTTGCAAGTGAAGGCGAGGGC...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATAGTCCCCTGAGGGGGTaGAGGCCATATCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYSPLRG*RPYLEG
Trigger: ACCCTCAAGATATGGCCTGCACCCCCTCAGGGGACT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTCCAGCTCAGCATCTTaGCTGGTGCGGTTATGCAGT +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLSSSAS*LVRLCS
Trigger: ACTGCATAACCGCACCAGGCAAGATGCTGAGCTGGA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCGTGCAGAAGCAAGAGTaGACAGTGGGAACAATTACT +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFVQKQE*TVGTIT
Trigger: AGTAATTGTTCCCACTGTGCACTCTTGCTTCTGCAC...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCTTTCCTTGACAGACTaGTGCCCATCCGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLLSLTD*CPSDPC
Trigger: GCAAGGATCGGATGGGCAGCAGTCTGTCAAGGAAAG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCCAGCTGGCGCCCCCTaGAGGAATCCCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVPAGAP*RNPLVS
Trigger: GGAAACCAAGGGATTCCTGCAGGGGGCGCCAGCTGG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCTGTCATGTTGCTTGCTaGACTCTAACCAAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFCHVAC*TLTKPN
Trigger: GTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACA...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTACTCTGCATGCTGGTaGCTAGTCTGCGCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSYSACW*LVCAPL
Trigger: AAGCGGGGCGCAGACTAGGCACCAGCATGCAGAGTA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGCCCGAAAGATGGTaGCGCGGCGGCCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVQPERW*RGGQSH
Trigger: ATGGCTTTGGCCGCCGCGCCACCATCTTTCGGGCTG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220888.9
ENST00000395715.8
CDS-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCTTACTGCTAGAAGATaGATCTTGAACATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSLTARR*ILNMQA
Trigger: AGCTTGCATGTTCAAGATCCATCTTCTAGCAGTAAG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACTCAAACCTTGACAATTaGCTTGACCACTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDSNLDN*LDHSVL
Trigger: AAGCACAGAGTGGTCAAGCCAATTGTCAAGGTTTGA...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCGAACGGTTGACCTTCTaGAAGTCTTTGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLERLTF*KSLEWL
Trigger: CAGCCATTCCAAAGACTTCCAGAAGGTCAACCGTTC...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACATTACATCAGGGCCATaGCTTTTGGAATATCGGAAG +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDITSGP*LLEYRK
Trigger: CTTCCGATATTCCAAAAGCCATGGCCCTGATGTAAT...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTATAGGTCGCGCCAGATaGGCGGCCTCCACATTGGGA +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGIGRAR*AASTLG
Trigger: TCCCAATGTGGAGGCCGCCCATCTGGCGCGACCTAT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAATAGGTCGCGCCAGATaGGCGGCCTCCACATTGGGA +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPIGRAR*AASTLG
Trigger: TCCCAATGTGGAGGCCGCCCATCTGGCGCGACCTAT...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCCTGCAGGAATCCCTTaGTTTCCACAGCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLPAGIP*FPQPSH
Trigger: ATGGCTTGGCTGTGGAAACCAAGGGATTCCTGCAGG...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCGGCACCGTTTGCAGTTaGCCCAGGTCTGGAATGCTT +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFGTVCS*PRSGML
Trigger: AAGCATTCCAGACCTGGGCCAACTGCAAACGGTGCC...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACTTTTCTCTTGTGCCTTaGACAGTCAGCAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDFSLVP*TVSKLS
Trigger: TGAAAGCTTGCTGACTGTCCAAGGCACAAGAGAAAA...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATCCATGCCTCTGCCCTTaGCCGTCTTTCTTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNPCLCP*PSFFGK
Trigger: TTTCCCAAAGAAAGACGGCCAAGGGCAGAGGCATGG...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACTTATGCAGTCCTAAGTaGTACTTTCGGAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDLCSPK*YFRKCL
Trigger: TAAGCACTTCCGAAAGTATCACTTAGGACTGCATAA...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGAGTTGCCCATATAAGTaGAATTGCAGAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSSCPYK*NCRIYS
Trigger: GCTGTAAATTCTGCAATTTCACTTATATGGGCAACT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAGATGGCACTGATGTTTaGCTCGCGAGCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKDGTDV*LASFQP
Trigger: CGGCTGGAAGCTCGCGAGTCAAACATCAGTGCCATC...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAGATGGCACTGATGTTTaGCTCGCGAGCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSDGTDV*LASFQP
Trigger: CGGCTGGAAGCTCGCGAGTCAAACATCAGTGCCATC...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCTCCTGTTCCTGGCAGTaGACAGTGTTGAAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFSCSWQ*TVLKCS
Trigger: GGAGCACTTCAACACTGTTCACTGCCAGGAACAGGA...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGATGGTGGATATGGCATaGCCGTCCTCTTCGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVMVDMA*PSSSPL
Trigger: CAACGGCGAAGAGGACGGTCATGCCATATCCACCAT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTATGGTGGATATGGCATaGCCGTCCTCTTCGCCGTTG +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSMVDMA*PSSSPL
Trigger: CAACGGCGAAGAGGACGGTCATGCCATATCCACCAT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATGCTTGCTTGGGTGTATaGCGGACTCCCCCGCAGGAT +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHACLGV*RTPPQD
Trigger: ATCCTGCGGGGGAGTCCGTCATACACCCAAGCAAGC...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTTGAGCTGCTCAGCCTaGAGTGCCTCTGGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYLSCSA*SASGLR
Trigger: CCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCACCTTAGACGCTGCCTaGCCACAAAGTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLTLDAA*PQSLEI
Trigger: AATTTCCAAACTTTGTGGTCAGGCAGCGTCTAAGGT...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCCCTGAGCAGTTATGCTaGGGAGCTTTCCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFPEQLC*GAFPSW
Trigger: CCATGAAGGGAAAGCTCCTCAGCATAACTGCTCAGG...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCAGGAGTGTCATCTCCTaGTTTGACTGTTATCTTGTC +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFRSVIS*FDCYLV
Trigger: GACAAGATAACAGTCAAAGCAGGAGATGACACTCCT...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCGGTGCTTTTCTGGGCTaGAAAGTCCTCTGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFGAFLG*KVLWDR
Trigger: TCTGTCCCAGAGGACTTTGCAGCCCAGAAAAGCACC...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCCTTTCCTTGACAGACTaGTGCCCATCCGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFLSLTD*CPSDPC
Trigger: GCAAGGATCGGATGGGCAGCAGTCTGTCAAGGAAAG...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCCTTGTTTTCTCCCGATaGAGGATACTGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFLVFSR*RILLGE
Trigger: CTCCCCCAGCAGTATCCTGCATCGGGAGAAAACAAG...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGAAGACAATGCCACAGTaGACACATTTTGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSKTMPQ*THFVES
Trigger: ACTTTCAACAAAATGTGTGCACTGTGGCATTGTCTT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCGATGCTGGCATATGCTaGACTGGAAAGGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLDAGIC*TGKVHC
Trigger: ACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATC...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGAAAACCAAAAGGAAGTaGTCTGCAAAGAATCCATGC +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPKTKRK*SAKNPC
Trigger: GCATGGATTCTTTGCAGAGCACTTCCTTTTGGTTTT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACGTTGTTCTAATTCGGTaGATGAGTTGCCCATATAAG +
Preference number: 4 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDVVLIR*MSCPYK
Trigger: CTTATATGGGCAACTCATCCACCGAATTAGAACAAC...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGAATCGAGGGGCTTTATaGGCACTGAGTACCCAACAG +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLNRGAL*ALSTQQ
Trigger: CTGTTGGGTACTCAGTGCCCATAAAGCCCCTCGATT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGGCTGCAAAGTCCTCTaGGACAGAATGGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLGCKVL*DRMDSV
Trigger: AACACTGTCCATTCTGTCCCAGAGGACTTTGCAGCC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATGGGCGGCCTCCACATTaGGACTATCCCTTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYGRPPH*DYPLES
Trigger: AGACTCTAAGGGATAGTCCCAATGTGGAGGCCGCCC...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCGATGCAGGATACTGCTaGGGGAGGGCCCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVDAGYC*GRAPDF
Trigger: GAAGTCTGGGGCCCTCCCCCAGCAGTATCCTGCATC...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCAGCCTGAAGTGCCTCTaGGTTAAGGCGCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLSLKCL*VKALSC
Trigger: ACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCATGTACAGGCAGGGCTaGGTAAAAACAGCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFMYRQG*VKTACH
Trigger: GTGGCACGCTGTTTTTACCCAGCCCTGCCTGTACAT...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTAGAGGACGCGAGGTCTaGAGAAACCAGCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSRGREV*RNQQHQ
Trigger: TTGGTGCTGCTGGTTTCTCCAGACCTCGCGTCCTCT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTGCAGGCCATATCTTaGGGGTCATCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPVQAIS*GSSASA
Trigger: AGCAGAGGCAGATGACCCTCAAGATATGGCCTGCAC...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTACAGGCCTTGAAGAATTaGTGTCCTGCAGCACACCAG +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALQALKN*CPAAHQ
Trigger: CTGGTGTGCTGCAGGACATCAATTCTTCAAGGCCTG...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTCCGTCCAATGCCAATaGATGTTCCACCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLSVQCQ*MFHLKS
Trigger: TGACTTCAGGTGGAACATTCATTGGCATTGGACGGA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTGTCATCTCCTGCTTTaGCTGTTATCTTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLCHLLL*LLSCPA
Trigger: GGCAGGACAAGATAACAGTCAAAGCAGGAGATGACA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTGTCAGGGGTGGTGAATaGACACTGATGGCACTGATG +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSVRGGE*TLMALM
Trigger: CATCAGTGCCATCAGTGTTCATTCACCACCCCTGAC...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGATGGTGGATATGGCATaGCCGTCCTCTTCGCCGTTG +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLMVDMA*PSSSPL
Trigger: CAACGGCGAAGAGGACGGTCATGCCATATCCACCAT...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTTTTGGGCTCCTCTTTaGTGGTGGATATGGCATGAC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLFWAPL*WWIWHD
Trigger: GTCATGCCATATCCACCATCAAAGAGGAGCCCAAAA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTCCAAACTTTCTCTTTaGGCCCGTCCTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLSKLSL*ARPSLP
Trigger: TGGAAGAGAAGGACGGGCTCAAAGAGAAAGTTTGGA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTTTGAGCTGCTCAGCCTaGAGTGCCTCTGGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGLSCSA*SASGLR
Trigger: CCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAA...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCATTGAGCTGCTCAGCCTaGAGTGCCTCTGGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSLSCSA*SASGLR
Trigger: CCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAA...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCTAACGGGCTTCCATTaGCTTGCTCCTCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYLTGFH*LAPHCC
Trigger: GCAGCAATGAGGAGCAAGTCAATGGAAGCCCGTTAG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTACCAGGACTGGCTGCTaGGCAGAATGGCTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSTRTGC*AEWLLV
Trigger: GACTAAAAGCCATTCTGCTCAGCAGCCAGTCCTGGT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCGAGAGAAGACTAAATTaGGAGGGCGCCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLERRLN*EGAIFL
Trigger: AAGAAAAATGGCGCCCTCTCAATTTAGTCTTCTCTC...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATGCCCTCGCCTTCACTTaGAACGTTTCTCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHALAFT*NVSQRG
Trigger: CCCCCTCTGAGAAACGTTGCAAGTGAAGGCGAGGGC...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTCTGCCTCTGCTCTTTaGGGAGACTTCAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYSASAL*GDFKGS
Trigger: TGAGCCCTTGAAGTCTCCGCAAAGAGCAGAGGCAGA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGTCTGCCTCTGCTCTTTaGGGAGACTTCAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVSASAL*GDFKGS
Trigger: TGAGCCCTTGAAGTCTCCGCAAAGAGCAGAGGCAGA...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATAGTCCCCTGAGGGGGTaGAGGCCATATCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHSPLRG*RPYLEG
Trigger: ACCCTCAAGATATGGCCTGCACCCCCTCAGGGGACT...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAGGCTTGACCACTCTGTaGTTGCCCTGTTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALGLTTL*LPCFLC
Trigger: ACAGAGGAAACAGGGCAAGCACAGAGTGGTCAAGCC...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACTCTGGAGACAGAGGTaGCGGGTCTGGGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKLWRQR*RVWVVI
Trigger: AATGACAACCCAGACCCGGCACCTCTGTCTCCAGAG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGCTCTGGAGACAGAGGTaGCGGGTCTGGGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLLWRQR*RVWVVI
Trigger: AATGACAACCCAGACCCGGCACCTCTGTCTCCAGAG...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCCAGCATCTTGCCTGGTaGGGTTATGCAGTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFQHLAW*GYAVLS
Trigger: ACTTAGGACTGCATAACCGCACCAGGCAAGATGCTG...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGTCCAGCTCAGCATCTTaGCTGGTGCGGTTATGCAGT +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVSSSAS*LVRLCS
Trigger: ACTGCATAACCGCACCAGGCAAGATGCTGAGCTGGA...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCGAAGGGCCAAGATTTTaGTGTCCAGCTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLEGPRF*CPAQHL
Trigger: AAGATGCTGAGCTGGACAGCAAAATCTTGGCCCTTC...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATGAAGGGCCAAGATTTTaGTGTCCAGCTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNEGPRF*CPAQHL
Trigger: AAGATGCTGAGCTGGACAGCAAAATCTTGGCCCTTC...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCTTAAGGCCGCCTGACTaGACTGCTCCGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVLRPPD*TAPCCL
Trigger: CAAGCAGCACGGAGCAGTGCAGTCAGGCGGCCTTAA...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTATCCTCGGCTCCCTTaGTGGAGAAGTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLYPRLP*WRSPSF
Trigger: AAAAGAAGGACTTCTCCAGCAAGGGAGCCGAGGATA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGCTGCTCAGCCTGAAGTaGCTCTGGGTTAAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLLLSLK*LWVKAL
Trigger: AAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAG...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGGGGCTTCCATTGACTTaGTCCTCATTGCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLGLPLT*SSLLPL
Trigger: GAGGGGCAGCAATGAGGAGCAAGTCAATGGAAGCCC...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAGGGCTTCCATTGACTTaGTCCTCATTGCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSGLPLT*SSLLPL
Trigger: GAGGGGCAGCAATGAGGAGCAAGTCAATGGAAGCCC...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGAAGACAATGCCACAGTaGACACATTTTGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPKTMPQ*THFVES
Trigger: ACTTTCAACAAAATGTGTGCACTGTGGCATTGTCTT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCAAAGATGCTGGCATATaGTGCACTGGAAAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLKDAGI*CTGKVH
Trigger: GTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTGGGTAAAAACAGCGTaGCACCATCTGTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLWVKTA*HHLSCC
Trigger: GCAACATGACAGATGGTGGCACGCTGTTTTTACCCA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCACTTTGTGATGTTTTaGAGCCACACAACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLHFVMF*SHTTGG
Trigger: GCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTG...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGAAGAATCCATGCCTCTaGCCTTGGCCGTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLKNPCL*PWPSFF
Trigger: AAAGAAAGACGGCCAAGGGCAGAGGCATGGATTCTT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTTGGCACTCCTATGGTaGCTTTCAACCAAGGATCTC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLLALLW*LSTKDL
Trigger: GAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAATAGGCTCCAGGATCTaGCCCTCGCCTTCACTTGCA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKIGSRI*PSPSLA
Trigger: TGCAAGTGAAGGCGAGGGCCAGATCCTGGAGCCTAT...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGAACGGTTGACCTTCTaGAAGTCTTTGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLERLTF*KSLEWL
Trigger: CAGCCATTCCAAAGACTTCCAGAAGGTCAACCGTTC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCCTGCAGGAATCCCTTaGTTTCCACAGCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYPAGIP*FPQPSH
Trigger: ATGGCTTGGCTGTGGAAACCAAGGGATTCCTGCAGG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTCTCCGTAACAGGGACTaGGATTCATCCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIILRNRD*DSSLDL
Trigger: CAAGTCCAAGGATGAATCCCAGTCCCTGTTACGGAG...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCAGCCTGAAGTGCCTCTaGGTTAAGGCGCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFSLKCL*VKALSC
Trigger: ACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCT...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAGGCACCGTTTGCAGTTaGCCCAGGTCTGGAATGCTT +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKGTVCS*PRSGML
Trigger: AAGCATTCCAGACCTGGGCCAACTGCAAACGGTGCC...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCCCTTCGTTTTCTCCTTaGAGGCACCGTTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFPSFSP*RHRLQL
Trigger: CAACTGCAAACGGTGCCTCCAAGGAGAAAACGAAGG...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGGGTTTTGGAACAAATaGTCCAATGGCCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLGFWNK*SNGQSS
Trigger: ACTGGACTGGCCATTGGACCATTTGTTCCAAAACCC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGAAAGCAAATCCATACTaGTTCATCACACACAAGAAA +
Preference number: 4 (lower is better)
Translates to: ATICHVACCTLTKPNHSSKANPY*FITHKK
Trigger: TTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTGTTGTTTGCAGAGTTaGTCTTGGATTATTGCGGGG +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLCCLQS*SWIIAG
Trigger: CCCCGCAATAATCCAAGATCAACTCTGCAAACAACA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220888.9
ENST00000395715.8
CDS-3UTR TCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCTTATGCAGTCCTAAGTaGTACTTTCGGAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLLCSPK*YFRKCL
Trigger: TAAGCACTTCCGAAAGTATCACTTAGGACTGCATAA...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCGTTAGAGTTTTTCTCTaGAGGTTTTGCAACCTCAGA +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLVRVFL*RFCNLR
Trigger: TCTGAGGTTGCAAAACCTTCAGAGAAAAACTCTAAC...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTTGGCTAGATCATTCTaGTTAATGACAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLLARSF*LMTEPL
Trigger: CAGGGGCTCTGTCATTAATCAGAATGATCTAGCCAA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGTCAGGGGTGGTGAATaGACACTGATGGCACTGATG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGVRGGE*TLMALM
Trigger: CATCAGTGCCATCAGTGTTCATTCACCACCCCTGAC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTGGCAGTGAACAGTGTTaGAGTGCTCCAGTAGTGACT +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSGSEQC*SAPVVT
Trigger: AGTCACTACTGGAGCACTTCAACACTGTTCACTGCC...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACTAACGGGCTTCCATTaGCTTGCTCCTCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPLTGFH*LAPHCC
Trigger: GCAGCAATGAGGAGCAAGTCAATGGAAGCCCGTTAG...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGACCAGGACTGGCTGCTaGGCAGAATGGCTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLTRTGC*AEWLLV
Trigger: GACTAAAAGCCATTCTGCTCAGCAGCCAGTCCTGGT...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAAGGGCTGCCTGGTGGTaGATAATTTGGGTGTTTCGC +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPRAAWW*IIWVFR
Trigger: GCGAAACACCCAAATTATTCACCACCAGGCAGCCCT...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCAGCAGGTTACCTTGTaGAGAAATGCCATGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLQQVTL*RNAMCS
Trigger: AGAACACATGGCATTTCTTCACAAGGTAACCTGCTG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTCCTGAGCAGTTATGCTaGGGAGCTTTCCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGPEQLC*GAFPSW
Trigger: CCATGAAGGGAAAGCTCCTCAGCATAACTGCTCAGG...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCGATCTGTACATCTGTTaGTTAATCGTCAAGAACACC +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLDLYIC*LIVKNT
Trigger: GGTGTTCTTGACGATTAATCAACAGATGTACAGATC...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCGAGCTACGCGACAGGTaGGATCAGAATAAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVELRDR*DQNKAR
Trigger: ACGGGCCTTATTCTGATCTCACCTGTCGCGTAGCTC...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGAAGAATGAGAACGCATaGGCTGGTCCTGGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVKNENA*AGPGLK
Trigger: CTTTAGGCCAGGACCAGCTCATGCGTTCTCATTCTT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTAGGGTCATCTGCCTCTaGTCTTTGCGGAGACTTCAA +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSRVICL*SLRRLQ
Trigger: TTGAAGTCTCCGCAAAGAGCAGAGGCAGATGACCCT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGAGGGTCATCTGCCTCTaGTCTTTGCGGAGACTTCAA +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVRVICL*SLRRLQ
Trigger: TTGAAGTCTCCGCAAAGAGCAGAGGCAGATGACCCT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCAGCATCTTGCCTGGTaGGGTTATGCAGTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYQHLAW*GYAVLS
Trigger: ACTTAGGACTGCATAACCGCACCAGGCAAGATGCTG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGGGTGCTTTTCTGGGCTaGAAAGTCCTCTGGGACAGA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLGAFLG*KVLWDR
Trigger: TCTGTCCCAGAGGACTTTGCAGCCCAGAAAAGCACC...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTCCTTGACAGACTGCTaGCCATCCGATCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHSLTDC*PSDPCR
Trigger: CCTGCAAGGATCGGATGGGCAGCAGTCTGTCAAGGA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACTTTCCTTGACAGACTaGTGCCCATCCGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPLSLTD*CPSDPC
Trigger: GCAAGGATCGGATGGGCAGCAGTCTGTCAAGGAAAG...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTTTGTAGCAGCTGTGTaGTCTCCTGTAGTGTCGGGA +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYFVAAV*SPVVSG
Trigger: TCCCGACACTACAGGAGAGCACACAGCTGCTACAAA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATAGAGGCCACACGCGTTaGATACATATCCGCCATTTG +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYRGHTR*IHIRHL
Trigger: CAAATGGCGGATATGTATGCAACGCGTGTGGCCTCT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTCATTGCTGCCCCTCTaGTGTTTGTTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYSLLPL*CLLSCS
Trigger: TGAGCAGCTCAACAAACAGCAGAGGGGCAGCAATGA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATGGCCCAGGTCTGGAATaGTTGATCGCCAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYGPGLE*LIAKSR
Trigger: TCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCC...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAGGCCCAGGTCTGGAATaGTTGATCGCCAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALGPGLE*LIAKSR
Trigger: TCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCC...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGGATGCTGGCATATGCTaGACTGGAAAGGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVDAGIC*TGKVHC
Trigger: ACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATC...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTTGTCCGTGCAAAGATaGTGGCATATGCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSLSVQR*WHMLHW
Trigger: CCAGTGCAGCATATGCCAGCATCTTTGCACGGACAA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATTGTCATGTTGCTTGCTaGACTCTAACCAAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNCHVAC*TLTKPN
Trigger: GTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACA...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATCACCATCTGTCATGTTaGTTGCTGCACTCTAACCAA +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNHHLSC*LLHSNQ
Trigger: TTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTG...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCCAAGGATCTCAAAGTaGTTTACAAACAAGTACTAC +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFPRISK*FTNKYY
Trigger: GTAGTACTTGTTTGTAAAGCACTTTGAGATCCTTGG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCGTCAACACTATTGGCTaGCTAGTTGATATTTACAGC +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLVNTIG*LVDIYS
Trigger: GCTGTAAATATCAACTAGGCAGCCAATAGTGTTGAC...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAGCTCAGCATCTTGCCTaGTGCGGTTATGCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSAQHLA*CGYAVL
Trigger: TAGGACTGCATAACCGCACCAGGCAAGATGCTGAGC...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGAGCTCTTGTCTGTCTTaGTCATTGTCTCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLSSCLS*SLSLLL
Trigger: CAGAAGGAGAGACAATGACCAAGACAGACAAGAGCT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTGGCTGCAAAGTCCTCTaGGACAGAATGGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSGCKVL*DRMDSV
Trigger: AACACTGTCCATTCTGTCCCAGAGGACTTTGCAGCC...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTTCCAAGGTGCTTTTCTaGGCTGCAAAGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGSKVLF*AAKSSG
Trigger: CCCAGAGGACTTTGCAGCCCAGAAAAGCACCTTGGA...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCAGCAAGAGTGCACAGTaGGAACAATTACTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFSKSAQ*EQLLFL
Trigger: TAGAAAAAGTAATTGTTCCCACTGTGCACTCTTGCT...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGACTGGGATTCATCCTTaGACTTGTTTTCTCCCGATG +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLTGIHP*TCFLPM
Trigger: CATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTACCTTCGTTTTCTCCTTaGAGGCACCGTTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALPSFSP*RHRLQL
Trigger: CAACTGCAAACGGTGCCTCCAAGGAGAAAACGAAGG...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTGGCATATGCTGCACTaGAAAGGTCCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYWHMLH*KGPLSP
Trigger: TGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGTGGCATATGCTGCACTaGAAAGGTCCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVWHMLH*KGPLSP
Trigger: TGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCA...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTGGGTTTTGGAACAAATaGTCCAATGGCCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIGFWNK*SNGQSS
Trigger: ACTGGACTGGCCATTGGACCATTTGTTCCAAAACCC...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTATGTACAGGCAGGGCTaGGTAAAAACAGCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGMYRQG*VKTACH
Trigger: GTGGCACGCTGTTTTTACCCAGCCCTGCCTGTACAT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAATGTACAGGCAGGGCTaGGTAAAAACAGCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKMYRQG*VKTACH
Trigger: GTGGCACGCTGTTTTTACCCAGCCCTGCCTGTACAT...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCGGAGCTTTCCCTTCATaGATAGTTTTTACAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLGAFPS*IVFTKP
Trigger: AGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCC...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTCCATGCCTCTGCCCTTaGCCGTCTTTCTTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGPCLCP*PSFFGK
Trigger: TTTCCCAAAGAAAGACGGCCAAGGGCAGAGGCATGG...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR CAA 72 bp AGGTTGCATTTCAATTCCTCAATTTTCTCTTGTGCCTaGGACAGTCAGCAAGCTTTCACCTTACTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RLHFNSSIFSCA*DSQQAFTLLAH
Trigger: GTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAGAGAAAATTGAGGAATTGAAATGCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTTGTTGTTTGCAGAGTTaGTCTTGGATTATTGCGGGG +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIICCLQS*SWIIAG
Trigger: CCCCGCAATAATCCAAGATCAACTCTGCAAACAACA...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR TCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTAAAACACAGAACGGTTaGCCTTCTGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIKTQNG*PSGSLW
Trigger: CCAAAGACTTCCAGAAGGTCAACCGTTCTGTGTTTT...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATCAGGCCTTGAAGAATTaGTGTCCTGCAGCACACCAG +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHQALKN*CPAAHQ
Trigger: CTGGTGTGCTGCAGGACATCAATTCTTCAAGGCCTG...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACCAGAATCACTGGATTaGAGTGCAGGGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPPESLD*SAGMDL
Trigger: CAAGTCCATCCCTGCACTTCAATCCAGTGATTCTGG...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAGGCAGTGAACAGTGTTaGAGTGCTCCAGTAGTGACT +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSGSEQC*SAPVVT
Trigger: AGTCACTACTGGAGCACTTCAACACTGTTCACTGCC...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTCCTGTTCCTGGCAGTaGACAGTGTTGAAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHSCSWQ*TVLKCS
Trigger: GGAGCACTTCAACACTGTTCACTGCCAGGAACAGGA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCATGGCTTTTAGTCAATaGACCCTGGGCTTCGTATTT +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLMAFSQ*TLGFVF
Trigger: AAATACGAAGCCCAGGGTTCATTGACTAAAAGCCAT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCAGGTCTGGAATGCTTaGTCGCCAAATCTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVQVWNA*SPNLEE
Trigger: TTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTACAGGTCTGGAATGCTTaGTCGCCAAATCTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALQVWNA*SPNLEE
Trigger: TTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTG...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTCTGGATATGTGTTGTaGAGTCATATTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLSGYVL*SHICPC
Trigger: GCACGGACAAATATGACTTCACAACACATATCCAGA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGAGAGAAGACTAAATTaGGAGGGCGCCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLERRLN*EGAIFL
Trigger: AAGAAAAATGGCGCCCTCTCAATTTAGTCTTCTCTC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTTAGCCCTATTTCCCTaGGCAGTTATGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLLALFP*AVMLRS
Trigger: GCTCCTCAGCATAACTGCTCAGGGAAATAGGGCTAA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATTAGCCCTATTTCCCTaGGCAGTTATGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPLALFP*AVMLRS
Trigger: GCTCCTCAGCATAACTGCTCAGGGAAATAGGGCTAA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACAGTCACGAACTGGTTaGACTCTACCTGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKQSRTG*TLPAIQ
Trigger: TTGGATGGCAGGTAGAGTTCAACCAGTTCGTGACTG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGATCTGTGGGGTCGTTaGCGTAGTAACCATATCCAC +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGDLWGR*RSNHIH
Trigger: GTGGATATGGTTACTACGGCAACGACCCCACAGATC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAGATCTGTGGGGTCGTTaGCGTAGTAACCATATCCAC +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKDLWGR*RSNHIH
Trigger: GTGGATATGGTTACTACGGCAACGACCCCACAGATC...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTCCAGCTCAGCATCTTaGCTGGTGCGGTTATGCAGT +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHSSSAS*LVRLCS
Trigger: ACTGCATAACCGCACCAGGCAAGATGCTGAGCTGGA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAGAAGGGCCAAGATTTTaGTGTCCAGCTCAGCATCTT +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALEGPRF*CPAQHL
Trigger: AAGATGCTGAGCTGGACAGCAAAATCTTGGCCCTTC...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATACTGTTATCTTGTCCTaGCATTTTCCCAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNTVILS*HFPKSP
Trigger: TGGAGACTTGGGAAAATGGCAGGACAAGATAACAGT...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGAGGAGTGTCATCTCCTaGTTTGACTGTTATCTTGTC +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLRSVIS*FDCYLV
Trigger: GACAAGATAACAGTCAAAGCAGGAGATGACACTCCT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGTATCCTCGGCTCCCTTaGTGGAGAAGTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVYPRLP*WRSPSF
Trigger: AAAAGAAGGACTTCTCCAGCAAGGGAGCCGAGGATA...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCATTTGTAGCAGCTGTGTaGTCTCCTGTAGTGTCGGGA +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSFVAAV*SPVVSG
Trigger: TCCCGACACTACAGGAGAGCACACAGCTGCTACAAA...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTTTGTAGCAGCTGTGTaGTCTCCTGTAGTGTCGGGA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLFVAAV*SPVVSG
Trigger: TCCCGACACTACAGGAGAGCACACAGCTGCTACAAA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATCTTGTTTTCTCCCGATaGAGGATACTGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHLVFSR*RILLGE
Trigger: CTCCCCCAGCAGTATCCTGCATCGGGAGAAAACAAG...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTACATATCCGCCATTTaGATTCTTTCGCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLYISAI*ILSPER
Trigger: TCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATCATTGCTGCCCCTCTaGTGTTTGTTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPSLLPL*CLLSCS
Trigger: TGAGCAGCTCAACAAACAGCAGAGGGGCAGCAATGA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTTTGTCCGTGCAAAGATaGTGGCATATGCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGLSVQR*WHMLHW
Trigger: CCAGTGCAGCATATGCCAGCATCTTTGCACGGACAA...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTGTGCATTGTTCCTATaGAGGCCCCTCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYCALFL*RPLWIC
Trigger: ACATATCCAGAGGGGCCTGCATAGGAACAATGCACA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTGAGGACGCTAGAGATTaGAGTAAGATCGGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIEDARD*SKIGSL
Trigger: TAAAGACCCGATCTTACTGCAATCTCTAGCGTCCTC...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR GCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCCTTGTTTGCTACATTTaGAAATGTAAACAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLLVCYI*KCKQLG
Trigger: GCCTAGCTGTTTACATTTGCAAATGTAGCAAACAAG...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCAAAATGGAGTGCAAATaGGACTACAGAATGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFKMECK*DYRMQK
Trigger: TTTTTGCATTCTGTAGTCGCATTTGCACTCCATTTT...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAAAGAATCCATGCCTCTaGCCTTGGCCGTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALKNPCL*PWPSFF
Trigger: AAAGAAAGACGGCCAAGGGCAGAGGCATGGATTCTT...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCCAAAAGGAAGTGCTCTaGAAAGAATCCATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFQKEVL*KESMPL
Trigger: CAGAGGCATGGATTCTTTGCAGAGCACTTCCTTTTG...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCCCAAGGATCTCAAAGTaGTTTACAAACAAGTACTAC +
Preference number: 4 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLPRISK*FTNKYY
Trigger: GTAGTACTTGTTTGTAAAGCACTTTGAGATCCTTGG...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATGCTCAGCATCTTGCCTaGTGCGGTTATGCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHAQHLA*CGYAVL
Trigger: TAGGACTGCATAACCGCACCAGGCAAGATGCTGAGC...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTTACAGCGGAAATACTTaGTGTTCCCTTGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIYSGNT*CSLGNL
Trigger: CAGATTGCCAAGGGAACACCAAGTATTTCCGCTGTA...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTACCAGTAGTAACTGGTaGCCTCTGTACCATTTTGTC +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIITSSNW*PLYHFV
Trigger: GACAAAATGGTACAGAGGCCACCAGTTACTACTGGT...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCTCCAAGGTGCTTTTCTaGGCTGCAAAGTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVSKVLF*AAKSSG
Trigger: CCCAGAGGACTTTGCAGCCCAGAAAAGCACCTTGGA...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTTTGACATCCGATGCTTaGGACTCATGCACACTTTCA +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIILTSDA*DSCTLS
Trigger: TGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAA...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTGCGAAGGTCATCACTaGAACTCTCGGTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSCEGHH*NSRSKL
Trigger: AAGTTTGGACCGAGAGTTCCAGTGATGACCTTCGCA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGTGCGAAGGTCATCACTaGAACTCTCGGTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVCEGHH*NSRSKL
Trigger: AAGTTTGGACCGAGAGTTCCAGTGATGACCTTCGCA...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGCTCCGTAACAGGGACTaGGATTCATCCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLLRNRD*DSSLDL
Trigger: CAAGTCCAAGGATGAATCCCAGTCCCTGTTACGGAG...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCAGAGAGAGGTCTTTGTaGTCAGGCAATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFRERSL*SGNWHK
Trigger: TTTGTGCCAATTGCCTGACCACAAAGACCTCTCTCT...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATCGTATTTACTTAGGCTaGGGAGTGGAATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNRIYLG*GVEFLS
Trigger: AGAGAGAAATTCCACTCCCCAGCCTAAGTAAATACG...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTTTCTTTCATTGCCCTaGACCTTCAATTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLFLSLP*TFNFSS
Trigger: GGAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATTTTCTTTCATTGCCCTaGACCTTCAATTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNFLSLP*TFNFSS
Trigger: GGAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAA...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAAACTGCACCATGTTATaGAGGGCCAAGATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALNCTML*RAKILL
Trigger: CAGCAAAATCTTGGCCCTTCATAACATGGTGCAGTT...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTAGTCTTTGGAATGGCTaGACTGCACCATGTTATGAA +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIISLWNG*TAPCYE
Trigger: TTCATAACATGGTGCAGTTCAGCCATTCCAAAGACT...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTAAAACACAGAACGGTTaGCCTTCTGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSKTQNG*PSGSLW
Trigger: CCAAAGACTTCCAGAAGGTCAACCGTTCTGTGTTTT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTTCCGTCCAATGCCAATaGATGTTCCACCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGSVQCQ*MFHLKS
Trigger: TGACTTCAGGTGGAACATTCATTGGCATTGGACGGA...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTCCGTCCAATGCCAATaGATGTTCCACCTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLSVQCQ*MFHLKS
Trigger: TGACTTCAGGTGGAACATTCATTGGCATTGGACGGA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCCAGAATCACTGGATTaGAGTGCAGGGATGGACTTG +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVPESLD*SAGMDL
Trigger: CAAGTCCATCCCTGCACTTCAATCCAGTGATTCTGG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATGTCATCTCCTGCTTTaGCTGTTATCTTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPCHLLL*LLSCPA
Trigger: GGCAGGACAAGATAACAGTCAAAGCAGGAGATGACA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTTGGCTAGATCATTCTaGTTAATGACAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSLARSF*LMTEPL
Trigger: CAGGGGCTCTGTCATTAATCAGAATGATCTAGCCAA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTGATTTGCTTCTTGTTTaGCATCCGATGCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSDLLLV*HPMLGT
Trigger: AGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATC...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTCCGATCCTTGCAGGTaGTTTGCTTCTTGTTTGACA +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSSDPCR*FASCLT
Trigger: TGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTGCTCCAGTAGTGACTaGGTATCGGCAGCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLCSSSD*VSAAVK
Trigger: TTTTACAGCTGCCGATACTCAGTCACTACTGGAGCA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTTTTGGGCTCCTCTTTaGTGGTGGATATGGCATGAC +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLFWAPL*WWIWHD
Trigger: GTCATGCCATATCCACCATCAAAGAGGAGCCCAAAA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATTTTGGGCTCCTCTTTaGTGGTGGATATGGCATGAC +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPFWAPL*WWIWHD
Trigger: GTCATGCCATATCCACCATCAAAGAGGAGCCCAAAA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAATCCAAACTTTCTCTTTaGGCCCGTCCTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKSKLSL*ARPSLP
Trigger: TGGAAGAGAAGGACGGGCTCAAAGAGAAAGTTTGGA...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACCCTTCAGATACGGATaGACTATTTCCTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPPFRYG*TISWIS
Trigger: GGAGATCCAGGAAATAGTTCATCCGTATCTGAAGGG...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACCCTTCAGATACGGATaGACTATTTCCTGGATCTCC +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSPFRYG*TISWIS
Trigger: GGAGATCCAGGAAATAGTTCATCCGTATCTGAAGGG...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTTCTGGATATGTGTTGTaGAGTCATATTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIISGYVL*SHICPC
Trigger: GCACGGACAAATATGACTTCACAACACATATCCAGA...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCACACAGAAGACATTTTaGGAGCTGATCTGTACATCT +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLTQKTF*ELICTS
Trigger: AGATGTACAGATCAGCTCTCAAAATGTCTTCTGTGT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTAATCATACCCAGCATTaGCTTCATAAGGCATGTGGC +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSNHTQH*LHKACG
Trigger: GCCACATGCCTTATGAAGTCAATGCTGGGTATGATT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCAAGAATGAGAACGCATaGGCTGGTCCTGGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVKNENA*AGPGLK
Trigger: CTTTAGGCCAGGACCAGCTCATGCGTTCTCATTCTT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATTATTGGCTGCCTAGTTaGTATTTACAGCTCGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNYWLPS*YLQLVF
Trigger: AAAGACGAGCTGTAAATATCAACTAGGCAGCCAATA...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCATCTTGAGGGTCATCTaGCTCTGCTCTTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVILRVI*LCSLRR
Trigger: TCTCCGCAAAGAGCAGAGGCAGATGACCCTCAAGAT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATATCTTGAGGGTCATCTaGCTCTGCTCTTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHILRVI*LCSLRR
Trigger: TCTCCGCAAAGAGCAGAGGCAGATGACCCTCAAGAT...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCACTGTTATCTTGTCCTaGCATTTTCCCAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFTVILS*HFPKSP
Trigger: TGGAGACTTGGGAAAATGGCAGGACAAGATAACAGT...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATAGAGGCCACACGCGTTaGATACATATCCGCCATTTG +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHRGHTR*IHIRHL
Trigger: CAAATGGCGGATATGTATGCAACGCGTGTGGCCTCT...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTCATTGCTGCCCCTCTaGTGTTTGTTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHSLLPL*CLLSCS
Trigger: TGAGCAGCTCAACAAACAGCAGAGGGGCAGCAATGA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATGATGCTGGCATATGCTaGACTGGAAAGGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHDAGIC*TGKVHC
Trigger: ACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATC...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTAAAGATGCTGGCATATaGTGCACTGGAAAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGKDAGI*CTGKVH
Trigger: GTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCAGTCATATTTGTCCGTaGAAAGATGCTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFSHICP*KDAGIC
Trigger: GCATATGCCAGCATCTTTGCACGGACAAATATGACT...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAATGTGCATTGTTCCTATaGAGGCCCCTCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKCALFL*RPLWIC
Trigger: ACATATCCAGAGGGGCCTGCATAGGAACAATGCACA...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATATATCAGAGAGGGTGTaGATGTGTATGTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYISERV*MCMYRQ
Trigger: CTGCCTGTACATACACATGCACACCCTCTCTGATAT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGCGTAACCTTAGACGCTaGCTGACCACAAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLRNLRR*LTTKFG
Trigger: TCCAAACTTTGTGGTCAGGCAGCGTCTAAGGTTACG...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCTCAATTTTCTCTTGTaGCTTGGACAGTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYLNFLL*LGQSAS
Trigger: GCTTGCTGACTGTCCAAGGCACAAGAGAAAATTGAG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTACTTGACATACTTCTaGCCTAGCATATTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLYLTYF*PSIFQK
Trigger: CTTCTGGAATATGCTAGGGCAGAAGTATGTCAAGTA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGAACGGTTGACCTTCTaGAAGTCTTTGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPERLTF*KSLEWL
Trigger: CAGCCATTCCAAAGACTTCCAGAAGGTCAACCGTTC...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATACCAGTAGTAACTGGTaGCCTCTGTACCATTTTGTC +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYTSSNW*PLYHFV
Trigger: GACAAAATGGTACAGAGGCCACCAGTTACTACTGGT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGAGCTCTTGTCTGTCTTaGTCATTGTCTCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVSSCLS*SLSLLL
Trigger: CAGAAGGAGAGACAATGACCAAGACAGACAAGAGCT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACAGGGCCATGGCTTTTaGAATATCGGAAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPQGHGF*NIGSHR
Trigger: TCTGTGACTTCCGATATTCCAAAAGCCATGGCCCTG...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCATTACATCAGGGCCATaGCTTTTGGAATATCGGAAG +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFITSGP*LLEYRK
Trigger: CTTCCGATATTCCAAAAGCCATGGCCCTGATGTAAT...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAATGCGAAGGTCATCACTaGAACTCTCGGTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKCEGHH*NSRSKL
Trigger: AAGTTTGGACCGAGAGTTCCAGTGATGACCTTCGCA...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTACTGGGATTCATCCTTaGACTTGTTTTCTCCCGATG +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSTGIHP*TCFLPM
Trigger: CATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTTAGTCAATGAACCCTaGGCTTCGTATTTACTTAGG +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLLVNEP*ASYLLR
Trigger: CCTAAGTAAATACGAAGCCCAGGGTTCATTGACTAA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCCCAAAAAGTGGGTACTaGTACTTTTCAATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFPKSGY*YFSIGL
Trigger: CAGCCCTATTGAAAAGTACCAGTACCCACTTTTTGG...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACTATGCAGGCCCCTCTaGATATGTGTTGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKLCRPL*ICVVKS
Trigger: TGACTTCACAACACATATCCAGAGGGGCCTGCATAG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACTATGCAGGCCCCTCTaGATATGTGTTGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPLCRPL*ICVVKS
Trigger: TGACTTCACAACACATATCCAGAGGGGCCTGCATAG...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTGAACAAATGGTCCAATaGCCAGTCCAGTACTGCTTT +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSEQMVQ*PVQYCF
Trigger: AAAGCAGTACTGGACTGGCCATTGGACCATTTGTTC...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAGGGTTTTGGAACAAATaGTCCAATGGCCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKGFWNK*SNGQSS
Trigger: ACTGGACTGGCCATTGGACCATTTGTTCCAAAACCC...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCAATGAAGGGATTGGCTaGTACATATACCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLNEGIG*YIYQLS
Trigger: TGACAGTTGGTATATGTACCAGCCAATCCCTTCATT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGGAGCTTTCCCTTCATaGATAGTTTTTACAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLGAFPS*IVFTKP
Trigger: AGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTACAACAGTCACGAACTaGTTGAACTCTACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSTTVTN*LNSTCH
Trigger: ATGGCAGGTAGAGTTCAACCAGTTCGTGACTGTTGT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACTTAAGGCAAAAGGCTaGCATACAGCACAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKLKAKG*HTAQKQ
Trigger: CTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACTTAAGGCAAAAGGCTaGCATACAGCACAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSLKAKG*HTAQKQ
Trigger: CTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAG...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTTTTTCTCTTGTGCCTTaGACAGTCAGCAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIFSLVP*TVSKLS
Trigger: TGAAAGCTTGCTGACTGTCCAAGGCACAAGAGAAAA...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCCACATAATAATACTTaGCACTCCTATGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLPHNNT*HSYGAF
Trigger: AAAGGCACCATAGGAGTGCCAAGTATTATTATGTGG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR CAA 72 bp GTTCACAGGTCTCAAGACCGGTCACTTTGTGATGTTTaGCAGCCACACAACAGGAGGCTAATAATTATTTTA +
Preference number: 4 (lower is better)
Translates to: VHRSQDRSLCDV*QPHNRRLIIIL
Trigger: TAAAATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTCTTGAGACCTGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTAACTGCACCATGTTATaGAGGGCCAAGATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGNCTML*RAKILL
Trigger: CAGCAAAATCTTGGCCCTTCATAACATGGTGCAGTT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGATTTGCTTCTTGTTTaGCATCCGATGCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPDLLLV*HPMLGT
Trigger: AGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATC...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTCCGATCCTTGCAGGTaGTTTGCTTCTTGTTTGACA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLSDPCR*FASCLT
Trigger: TGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTCCAAACTTTCTCTTTaGGCCCGTCCTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHSKLSL*ARPSLP
Trigger: TGGAAGAGAAGGACGGGCTCAAAGAGAAAGTTTGGA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGGTTGCATCCTTTTGTaGATATCCAGAGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPGCILL*ISRVWL
Trigger: CAGCCAAACTCTGGATATTCACAAAAGGATGCAACC...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGGTTGCATCCTTTTGTaGATATCCAGAGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGGCILL*ISRVWL
Trigger: CAGCCAAACTCTGGATATTCACAAAAGGATGCAACC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGGGTTGCATCCTTTTGTaGATATCCAGAGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLGCILL*ISRVWL
Trigger: CAGCCAAACTCTGGATATTCACAAAAGGATGCAACC...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGGTCTGGAATGCTTaGTCGCCAAATCTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVQVWNA*SPNLEE
Trigger: TTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTCTGGATATGTGTTGTaGAGTCATATTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYSGYVL*SHICPC
Trigger: GCACGGACAAATATGACTTCACAACACATATCCAGA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCAATACCTGGCTAAAATaGAATCACTACAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLNTWLK*NHYRSI
Trigger: GATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGCAGCAGGTTACCTTGTaGAGAAATGCCATGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLQQVTL*RNAMCS
Trigger: AGAACACATGGCATTTCTTCACAAGGTAACCTGCTG...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGACCTTAGACGCTGCCTaGCCACAAAGTTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLTLDAA*PQSLEI
Trigger: AATTTCCAAACTTTGTGGTCAGGCAGCGTCTAAGGT...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATAGACATTTTGAGAGCTaGTCTGTACATCTGTTGATT +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNRHFES*SVHLLI
Trigger: AATCAACAGATGTACAGATCAGCTCTCAAAATGTCT...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR TCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCACCCAAACAAAACAATaGTACAAAGCAACTGCGAAT +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLTQTKQ*YKATAN
Trigger: ATTCGCAGTTGCTTTGTATCATTGTTTTGTTTGGGT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTGGGTTGGCTCTTTATaGTTTTTCTATCCCAAACAA +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLWVGSL*FFYPKQ
Trigger: TTGTTTGGGATAGAAAAATCATAAAGAGCCAACCCA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATAGACCGGTCACTTTGTaGTGTTTTGCAGCCACACAA +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHRPVTL*CFAATQ
Trigger: TTGTGTGGCTGCAAAACATCACAAAGTGACCGGTCT...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCAGACCGGTCACTTTGTaGTGTTTTGCAGCCACACAA +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVRPVTL*CFAATQ
Trigger: TTGTGTGGCTGCAAAACATCACAAAGTGACCGGTCT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAATCACTGGATTGAAGTaGAGGGATGGACTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALITGLK*RDGLVR
Trigger: TCTAACAAGTCCATCCCTGCACTTCAATCCAGTGAT...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTAGGAGTGTCATCTCCTaGTTTGACTGTTATCTTGTC +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSRSVIS*FDCYLV
Trigger: GACAAGATAACAGTCAAAGCAGGAGATGACACTCCT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAGTGCAGAAGCAAGAGTaGACAGTGGGAACAATTACT +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKVQKQE*TVGTIT
Trigger: AGTAATTGTTCCCACTGTGCACTCTTGCTTCTGCAC...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGTGCAGAAGCAAGAGTaGACAGTGGGAACAATTACT +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGVQKQE*TVGTIT
Trigger: AGTAATTGTTCCCACTGTGCACTCTTGCTTCTGCAC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAATTGTTTGACATCCGATaGTTGGGACTCATGCACACT +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKLFDIR*LGLMHT
Trigger: AGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAA...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGTACATATCCGCCATTTaGATTCTTTCGCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVYISAI*ILSPER
Trigger: TCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTA...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATAGTCATATTTGTCCGTaGAAAGATGCTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYSHICP*KDAGIC
Trigger: GCATATGCCAGCATCTTTGCACGGACAAATATGACT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTAGTCATATTTGTCCGTaGAAAGATGCTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSSHICP*KDAGIC
Trigger: GCATATGCCAGCATCTTTGCACGGACAAATATGACT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTGTGCATTGTTCCTATaGAGGCCCCTCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHCALFL*RPLWIC
Trigger: ACATATCCAGAGGGGCCTGCATAGGAACAATGCACA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTCAATTTCTCCTCCTCTaGCTAGGGTTTCATGATCAT +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSQFLLL*LGFHDH
Trigger: ATGATCATGAAACCCTAGGCAGAGGAGGAGAAATTG...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATGTCATGTTGCTTGCTaGACTCTAACCAAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPCHVAC*TLTKPN
Trigger: GTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTATCTGTCATGTTGCTTaGTGCACTCTAACCAAGCCT +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGICHVA*CTLTKP
Trigger: AGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGAT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAATCTGTCATGTTGCTTaGTGCACTCTAACCAAGCCT +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKICHVA*CTLTKP
Trigger: AGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGAT...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTATATCAGAGAGGGTGTaGATGTGTATGTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGISERV*MCMYRQ
Trigger: CTGCCTGTACATACACATGCACACCCTCTCTGATAT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCGTAACCTTAGACGCTaGCTGACCACAAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVRNLRR*LTTKFG
Trigger: TCCAAACTTTGTGGTCAGGCAGCGTCTAAGGTTACG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTCTCAATTTTCTCTTGTaGCTTGGACAGTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGLNFLL*LGQSAS
Trigger: GCTTGCTGACTGTCCAAGGCACAAGAGAAAATTGAG...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCTTCTCATTTGCAGTTaGCTGCTGATAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYLLICS*LLIEFH
Trigger: GTGGAATTCTATCAGCAGGCAACTGCAAATGAGAAG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTAAAACCAAAAGGAAGTaGTCTGCAAAGAATCCATGC +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIKTKRK*SAKNPC
Trigger: GCATGGATTCTTTGCAGAGCACTTCCTTTTGGTTTT...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTGCTTTCTAAGCAACTaGAGCACTATCAGGAACATG +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSCFLSN*STIRNM
Trigger: CATGTTCCTGATAGTGCTGCAGTTGCTTAGAAAGCA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGTGCTTTCTAAGCAACTaGAGCACTATCAGGAACATG +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVCFLSN*STIRNM
Trigger: CATGTTCCTGATAGTGCTGCAGTTGCTTAGAAAGCA...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTACTTGGTGTTCCCTTaGCAATCTGGTGTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLYLVFP*QSGVFR
Trigger: ACGGAAAACACCAGATTGCCAAGGGAACACCAAGTA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATACAGCGGAAATACTTaGTGTTCCCTTGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPYSGNT*CSLGNL
Trigger: CAGATTGCCAAGGGAACACCAAGTATTTCCGCTGTA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGAGCTCTTGTCTGTCTTaGTCATTGTCTCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLSSCLS*SLSLLL
Trigger: CAGAAGGAGAGACAATGACCAAGACAGACAAGAGCT...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGATAATGACGGAGAAGTaGCCCCACTACAATTACATC +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVIMTEK*PHYNYI
Trigger: GATGTAATTGTAGTGGGGCCACTTCTCCGTCATTAT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATTGACATCCGATGCTTaGGACTCATGCACACTTTCA +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPLTSDA*DSCTLS
Trigger: TGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACACACTCTCAGAAACTaGCTCTCCCATTTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPHTLRN*LSHFRV
Trigger: GACTCTAAAATGGGAGAGCCAGTTTCTGAGAGTGTG...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTACTGGGATTCATCCTTaGACTTGTTTTCTCCCGATG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGTGIHP*TCFLPM
Trigger: CATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGAGAGAGAGGTCTTTGTaGTCAGGCAATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLRERSL*SGNWHK
Trigger: TTTGTGCCAATTGCCTGACCACAAAGACCTCTCTCT...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCGTATTTACTTAGGCTaGGGAGTGGAATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVRIYLG*GVEFLS
Trigger: AGAGAGAAATTCCACTCCCCAGCCTAAGTAAATACG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTCCAAAAAGTGGGTACTaGTACTTTTCAATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSPKSGY*YFSIGL
Trigger: CAGCCCTATTGAAAAGTACCAGTACCCACTTTTTGG...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGAACAAATGGTCCAATaGCCAGTCCAGTACTGCTTT +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPEQMVQ*PVQYCF
Trigger: AAAGCAGTACTGGACTGGCCATTGGACCATTTGTTC...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTTTCTTTCATTGCCCTaGACCTTCAATTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSFLSLP*TFNFSS
Trigger: GGAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCAATGAAGGGATTGGCTaGTACATATACCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFNEGIG*YIYQLS
Trigger: TGACAGTTGGTATATGTACCAGCCAATCCCTTCATT...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGACAACAGTCACGAACTaGTTGAACTCTACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLTTVTN*LNSTCH
Trigger: ATGGCAGGTAGAGTTCAACCAGTTCGTGACTGTTGT...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAAAGCTTTCACCTTACTaGCTCACCAAAGACGACTTG +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSKLSPY*LTKDDL
Trigger: CAAGTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTT...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTATTGGCCGTCTTTCTTTaGGAAAATAACAATGCCCTC +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALLAVFL*ENNNAL
Trigger: GAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAA...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTTGGCCGTCTTTCTTTaGGAAAATAACAATGCCCTC +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSLAVFL*ENNNAL
Trigger: GAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACCAAAGTTTTCCATGTaGTTGTCAAATAGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSPKFSM*LSNSPP
Trigger: GGGCGGACTATTTGACAACCACATGGAAAACTTTGG...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACCAAAGTTTTCCATGTaGTTGTCAAATAGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPPKFSM*LSNSPP
Trigger: GGGCGGACTATTTGACAACCACATGGAAAACTTTGG...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTCTGATCCGTATTTTCTaGCATCTGATCTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSLIRIF*HLICRK
Trigger: TTTTCTGCAGATCAGATGTCAGAAAATACGGATCAG...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTCTGCAGCATCACTCTaGTCCGTATTTTCTGACATC +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHSAASL*SVFSDI
Trigger: GATGTCAGAAAATACGGATCAGAGTGATGCTGCAGA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCTCTGCAGCATCACTCTaGTCCGTATTTTCTGACATC +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVSAASL*SVFSDI
Trigger: GATGTCAGAAAATACGGATCAGAGTGATGCTGCAGA...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAAGTCTTTGGAATGGCTaGACTGCACCATGTTATGAA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKSLWNG*TAPCYE
Trigger: TTCATAACATGGTGCAGTTCAGCCATTCCAAAGACT...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTAATGAATGTTCCACCTaGAGTCACCTGCACATCATA +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGNECST*SHLHII
Trigger: TATGATGTGCAGGTGACTTCAGGTGGAACATTCATT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTAGTTGCCCATATAAGTaGAATTGCAGAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIISCPYK*NCRIYS
Trigger: GCTGTAAATTCTGCAATTTCACTTATATGGGCAACT...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAATGGCTTTTAGTCAATaGACCCTGGGCTTCGTATTT +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPMAFSQ*TLGFVF
Trigger: AAATACGAAGCCCAGGGTTCATTGACTAAAAGCCAT...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCGTGCACACATTTTGTTaGAAGTTCATCTTGAGTACT +
Preference number: 4 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFVHTFC*KFILST
Trigger: AGTACTCAAGATGAACTTTCAACAAAATGTGTGCAC...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATCAGCAGGTTACCTTGTaGAGAAATGCCATGTGTTCT +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHQQVTL*RNAMCS
Trigger: AGAACACATGGCATTTCTTCACAAGGTAACCTGCTG...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCGAAGACCCGGCACTGTaGAAAAGAAACAAAACCCAA +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVEDPAL*KRNKTQ
Trigger: TTGGGTTTTGTTTCTTTTTCACAGTGCCGGGTCTTC...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTCCTGGCCTAAAGTTTaGTCCAAAGCTCAATTTAGA +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSSWPKV*SKAQFR
Trigger: TCTAAATTGAGCTTTGGATCAAACTTTAGGCCAGGA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTATCCTGGCCTAAAGTTTaGTCCAAAGCTCAATTTAGA +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALSWPKV*SKAQFR
Trigger: TCTAAATTGAGCTTTGGATCAAACTTTAGGCCAGGA...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTATATTGGCTGCCTAGTTaGTATTTACAGCTCGTCTTT +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALYWLPS*YLQLVF
Trigger: AAAGACGAGCTGTAAATATCAACTAGGCAGCCAATA...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAATCACTGGATTGAAGTaGAGGGATGGACTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKITGLK*RDGLVR
Trigger: TCTAACAAGTCCATCCCTGCACTTCAATCCAGTGAT...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTTGTTTGACATCCGATaGTTGGGACTCATGCACACT +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHLFDIR*LGLMHT
Trigger: AGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAATACATATCCGCCATTTaGATTCTTTCGCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKYISAI*ILSPER
Trigger: TCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTA...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACATCCAGAAAGACAATaGCACAGTGCACACATTTTG +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKHPERQ*HSAHIL
Trigger: CAAAATGTGTGCACTGTGGCATTGTCTTTCTGGATG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACATCCAGAAAGACAATaGCACAGTGCACACATTTTG +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPHPERQ*HSAHIL
Trigger: CAAAATGTGTGCACTGTGGCATTGTCTTTCTGGATG...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTGGCCAGTCCAGTACTaGTTTAGTATAATAATATGT +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLWPVQY*FSIIIC
Trigger: ACATATTATTATACTAAAGCAGTACTGGACTGGCCA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACCATCTGTCATGTTaGTTGCTGCACTCTAACCAA +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVHHLSC*LLHSNQ
Trigger: TTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATCACCATCTGTCATGTTaGTTGCTGCACTCTAACCAA +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHHHLSC*LLHSNQ
Trigger: TTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTG...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCATATCAGAGAGGGTGTaGATGTGTATGTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVISERV*MCMYRQ
Trigger: CTGCCTGTACATACACATGCACACCCTCTCTGATAT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCCTTTAGTTATAATGTaGCAAGTGAGATTAGTAACC +
Preference number: 4 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLPLVIM*QVRLVT
Trigger: GGTTACTAATCTCACTTGGCACATTATAACTAAAGG...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTCTTGTTTGCTACATTTaGAAATGTAAACAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIILVCYI*KCKQLG
Trigger: GCCTAGCTGTTTACATTTGCAAATGTAGCAAACAAG...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTGGTTGAACTCTACCTaGCATCCAACTTTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYWLNST*HPTLRN
Trigger: GTTTCTTAAAGTTGGATGGCAGGTAGAGTTCAACCA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACTTCTCATTTGCAGTTaGCTGCTGATAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSLLICS*LLIEFH
Trigger: GTGGAATTCTATCAGCAGGCAACTGCAAATGAGAAG...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAGTCAACACTATTGGCTaGCTAGTTGATATTTACAGC +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALVNTIG*LVDIYS
Trigger: GCTGTAAATATCAACTAGGCAGCCAATAGTGTTGAC...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTTCAAACCTTGACAATTaGCTTGACCACTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGSNLDN*LDHSVL
Trigger: AAGCACAGAGTGGTCAAGCCAATTGTCAAGGTTTGA...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATCAAACCTTGACAATTaGCTTGACCACTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPSNLDN*LDHSVL
Trigger: AAGCACAGAGTGGTCAAGCCAATTGTCAAGGTTTGA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCCAGTAAGTCAGTTTTaGATTTATTCAGTCTTACAC +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLPVSQF*IYSVLH
Trigger: GTGTAAGACTGAATAAATCCAAAACTGACTTACTGG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAATGGAAGTCTTTGGAATaGCTGAACTGCACCATGTTA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKWKSLE*LNCTML
Trigger: TAACATGGTGCAGTTCAGCCATTCCAAAGACTTCCA...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATGGAAGTCTTTGGAATaGCTGAACTGCACCATGTTA +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPWKSLE*LNCTML
Trigger: TAACATGGTGCAGTTCAGCCATTCCAAAGACTTCCA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCTACTTGGTGTTCCCTTaGCAATCTGGTGTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVYLVFP*QSGVFR
Trigger: ACGGAAAACACCAGATTGCCAAGGGAACACCAAGTA...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTACAGCGGAAATACTTaGTGTTCCCTTGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHYSGNT*CSLGNL
Trigger: CAGATTGCCAAGGGAACACCAAGTATTTCCGCTGTA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAATAATGACGGAGAAGTaGCCCCACTACAATTACATC +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKIMTEK*PHYNYI
Trigger: GATGTAATTGTAGTGGGGCCACTTCTCCGTCATTAT...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATCACACTCTCAGAAACTaGCTCTCCCATTTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHHTLRN*LSHFRV
Trigger: GACTCTAAAATGGGAGAGCCAGTTTCTGAGAGTGTG...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATAGAGAGAGGTCTTTGTaGTCAGGCAATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHRERSL*SGNWHK
Trigger: TTTGTGCCAATTGCCTGACCACAAAGACCTCTCTCT...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTCGTATTTACTTAGGCTaGGGAGTGGAATTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGRIYLG*GVEFLS
Trigger: AGAGAGAAATTCCACTCCCCAGCCTAAGTAAATACG...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTATTAGTCAATGAACCCTaGGCTTCGTATTTACTTAGG +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALLVNEP*ASYLLR
Trigger: CCTAAGTAAATACGAAGCCCAGGGTTCATTGACTAA...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTCAATCAGCTTCACTCTaGAAGTCATTATGTACAAAG +
Preference number: 4 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIQSASL*KSLCTK
Trigger: CTTTGTACATAATGACTTCCAGAGTGAAGCTGATTG...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGAAAGCAAATCCATACTaGTTCATCACACACAAGAAA +
Preference number: 4 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLKANPY*FITHKK
Trigger: TTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATAAAGCAAATCCATACTaGTTCATCACACACAAGAAA +
Preference number: 4 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNKANPY*FITHKK
Trigger: TTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTT...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGCTGATCCGTATTTTCTaGCATCTGATCTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLLIRIF*HLICRK
Trigger: TTTTCTGCAGATCAGATGTCAGAAAATACGGATCAG...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGCTATGTTCCTCCTTATaGTTTAGTTCTGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLLCSSL*FSSAAS
Trigger: TGATGCTGCAGAACTAAATCATAAGGAGGAACATAG...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAATTATGCAGTCCTAAGTaGTACTTTCGGAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKLCSPK*YFRKCL
Trigger: TAAGCACTTCCGAAAGTATCACTTAGGACTGCATAA...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAGTTAGAGTTTTTCTCTaGAGGTTTTGCAACCTCAGA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKVRVFL*RFCNLR
Trigger: TCTGAGGTTGCAAAACCTTCAGAGAAAAACTCTAAC...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTTAGAGTTTTTCTCTaGAGGTTTTGCAACCTCAGA +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPVRVFL*RFCNLR
Trigger: TCTGAGGTTGCAAAACCTTCAGAGAAAAACTCTAAC...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTGTGCACACATTTTGTTaGAAGTTCATCTTGAGTACT +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSVHTFC*KFILST
Trigger: AGTACTCAAGATGAACTTTCAACAAAATGTGTGCAC...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAGACATTACAAGCTATTaGATTCCCATCAAGAAAACC +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALDITSY*IPIKKT
Trigger: GGTTTTCTTGATGGGAATTCAATAGCTTGTAATGTC...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATGAGAGAAGACTAAATTaGGAGGGCGCCATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHERRLN*EGAIFL
Trigger: AAGAAAAATGGCGCCCTCTCAATTTAGTCTTCTCTC...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTAATACCTGGCTAAAATaGAATCACTACAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSNTWLK*NHYRSI
Trigger: GATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTATTAAACCCACGGTCTaGCATTTGTATCCATCTATG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGIKPTV*HLYPSM
Trigger: CATAGATGGATACAAATGTCAGACCGTGGGTTTAAT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATATCACTGGATTGAAGTaGAGGGATGGACTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHITGLK*RDGLVR
Trigger: TCTAACAAGTCCATCCCTGCACTTCAATCCAGTGAT...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAAAGACAATGCCACAGTaGACACATTTTGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALKTMPQ*THFVES
Trigger: ACTTTCAACAAAATGTGTGCACTGTGGCATTGTCTT...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATCAATTTCTCCTCCTCTaGCTAGGGTTTCATGATCAT +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHQFLLL*LGFHDH
Trigger: ATGATCATGAAACCCTAGGCAGAGGAGGAGAAATTG...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAATTTCTCCTCCTCTaGCTAGGGTTTCATGATCAT +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVQFLLL*LGFHDH
Trigger: ATGATCATGAAACCCTAGGCAGAGGAGGAGAAATTG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGATGTTGCTTAAGGATTaGCACGATGCATTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVMLLKD*HDAFCY
Trigger: ATAACAGAATGCATCGTGGCAATCCTTAAGCAACAT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGAACAGACATCTTTGCTaGCTGAAGATTGTTTGCATA +
Preference number: 4 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVNRHLC*LKIVCI
Trigger: TATGCAAACAATCTTCAGGCAGCAAAGATGTCTGTT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTCTTACTGCTAGAAGATaGATCTTGAACATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGLTARR*ILNMQA
Trigger: AGCTTGCATGTTCAAGATCCATCTTCTAGCAGTAAG...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGTTGTTCTAATTCGGTaGATGAGTTGCCCATATAAG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGVVLIR*MSCPYK
Trigger: CTTATATGGGCAACTCATCCACCGAATTAGAACAAC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAGTTGTTCTAATTCGGTaGATGAGTTGCCCATATAAG +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSVVLIR*MSCPYK
Trigger: CTTATATGGGCAACTCATCCACCGAATTAGAACAAC...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCATTACATCAGGGCCATaGCTTTTGGAATATCGGAAG +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVITSGP*LLEYRK
Trigger: CTTCCGATATTCCAAAAGCCATGGCCCTGATGTAAT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCATAATGACGGAGAAGTaGCCCCACTACAATTACATC +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVIMTEK*PHYNYI
Trigger: GATGTAATTGTAGTGGGGCCACTTCTCCGTCATTAT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAAGCAAGAGTGCACAGTaGGAACAATTACTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALSKSAQ*EQLLFL
Trigger: TAGAAAAAGTAATTGTTCCCACTGTGCACTCTTGCT...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAATTAGTCAATGAACCCTaGGCTTCGTATTTACTTAGG +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKLVNEP*ASYLLR
Trigger: CCTAAGTAAATACGAAGCCCAGGGTTCATTGACTAA...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAAATGAAGGGATTGGCTaGTACATATACCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKNEGIG*YIYQLS
Trigger: TGACAGTTGGTATATGTACCAGCCAATCCCTTCATT...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTACTTTTCTCATATACTTaGAGTCATGTAGTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALLFSYT*SHVVSL
Trigger: GAGAGACACTACATGACTCCAAGTATATGAGAAAAG...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTACTAGTTTCTCACGTGTaGATTACTCTTGAATTTCAC +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALLVSHV*ITLEFH
Trigger: GTGAAATTCAAGAGTAATCCACACGTGAGAAACTAG...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCTAGTTTCTCACGTGTaGATTACTCTTGAATTTCAC +
Preference number: 4 (lower is better)
Translates to: YILVASIEARLTAPLTNYLVSHV*ITLEFH
Trigger: GTGAAATTCAAGAGTAATCCACACGTGAGAAACTAG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACCACATAATAATACTTaGCACTCCTATGGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKPHNNT*HSYGAF
Trigger: AAAGGCACCATAGGAGTGCCAAGTATTATTATGTGG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
3UTR CAA 72 bp TTTTTAACTTCATTCGCTACAACAGTCACGAACTGGTaGAACTCTACCTGCCATCCAACTTTAAGAAACGAA +
Preference number: 4 (lower is better)
Translates to: FLTSFATTVTNW*NSTCHPTLRNE
Trigger: TTCGTTTCTTAAAGTTGGATGGCAGGTAGAGTTCAACCAGTTCGTGACTGTTGTAGCGAATGAAGTTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAGACATTACAAGCTATTaGATTCCCATCAAGAAAACC +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSDITSY*IPIKKT
Trigger: GGTTTTCTTGATGGGAATTCAATAGCTTGTAATGTC...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAATCCATCTATGCTTTTaGATTGAGGGGATTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSIHLCF*IEGIPL
Trigger: TAAAGGAATCCCCTCAATTCAAAAGCATAGATGGAT...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCATTAAACCCACGGTCTaGCATTTGTATCCATCTATG +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVIKPTV*HLYPSM
Trigger: CATAGATGGATACAAATGTCAGACCGTGGGTTTAAT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAACTGACTCTAATGCATaGTGGAATATCTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKTDSNA*WNIFVA
Trigger: TGCAACAAAGATATTCCATCATGCATTAGAGTCAGT...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGACTGACTCTAATGCATaGTGGAATATCTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLTDSNA*WNIFVA
Trigger: TGCAACAAAGATATTCCATCATGCATTAGAGTCAGT...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTGGGTTGGCTCTTTATaGTTTTTCTATCCCAAACAA +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLWVGSL*FFYPKQ
Trigger: TTGTTTGGGATAGAAAAATCATAAAGAGCCAACCCA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTAAAATGGAGTGCAAATaGGACTACAGAATGCAAAAA +
Preference number: 4 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSKMECK*DYRMQK
Trigger: TTTTTGCATTCTGTAGTCGCATTTGCACTCCATTTT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCTACTTGACATACTTCTaGCCTAGCATATTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVYLTYF*PSIFQK
Trigger: CTTCTGGAATATGCTAGGGCAGAAGTATGTCAAGTA...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGAGTTTTGGGACTCTATaGTCTAGAAGGACAATTTTC +
Preference number: 4 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLSFGTL*SRRTIF
Trigger: GAAAATTGTCCTTCTAGAGCATAGAGTCCCAAAACT...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAAGTTTTGGGACTCTATaGTCTAGAAGGACAATTTTC +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSSFGTL*SRRTIF
Trigger: GAAAATTGTCCTTCTAGAGCATAGAGTCCCAAAACT...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAAACAGACATCTTTGCTaGCTGAAGATTGTTTGCATA +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPNRHLC*LKIVCI
Trigger: TATGCAAACAATCTTCAGGCAGCAAAGATGTCTGTT...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTACCAGTAAGTCAGTTTTaGATTTATTCAGTCTTACAC +
Preference number: 4 (lower is better)
Translates to: IILGTPMVPFNQGSQSALPVSQF*IYSVLH
Trigger: GTGTAAGACTGAATAAATCCAAAACTGACTTACTGG...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAAGCAAGAGTGCACAGTaGGAACAATTACTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKSKSAQ*EQLLFL
Trigger: TAGAAAAAGTAATTGTTCCCACTGTGCACTCTTGCT...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACTTTTCTCATATACTTaGAGTCATGTAGTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKLFSYT*SHVVSL
Trigger: GAGAGACACTACATGACTCCAAGTATATGAGAAAAG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCAGTTGCCCATATAAGTaGAATTGCAGAATTTACAGC +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVSCPYK*NCRIYS
Trigger: GCTGTAAATTCTGCAATTTCACTTATATGGGCAACT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATGTGCACACATTTTGTTaGAAGTTCATCTTGAGTACT +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHVHTFC*KFILST
Trigger: AGTACTCAAGATGAACTTTCAACAAAATGTGTGCAC...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATGACATTACAAGCTATTaGATTCCCATCAAGAAAACC +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHDITSY*IPIKKT
Trigger: GGTTTTCTTGATGGGAATTCAATAGCTTGTAATGTC...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCAATACCTGGCTAAAATaGAATCACTACAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVNTWLK*NHYRSI
Trigger: GATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR TCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCATCCATCTATGCTTTTaGATTGAGGGGATTCCTTTA +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVIHLCF*IEGIPL
Trigger: TAAAGGAATCCCCTCAATTCAAAAGCATAGATGGAT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATGGCCAGTCCAGTACTaGTTTAGTATAATAATATGT +
Preference number: 4 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPWPVQY*FSIIIC
Trigger: ACATATTATTATACTAAAGCAGTACTGGACTGGCCA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACCTTTAGTTATAATGTaGCAAGTGAGATTAGTAACC +
Preference number: 4 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSPLVIM*QVRLVT
Trigger: GGTTACTAATCTCACTTGGCACATTATAACTAAAGG...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTAATGTAAAAATGGAGTaGAAATGCGACTACAGAATG +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGNVKME*KCDYRM
Trigger: CATTCTGTAGTCGCATTTGCACTCCATTTTTACATT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCATGTTGCTTAAGGATTaGCACGATGCATTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVMLLKD*HDAFCY
Trigger: ATAACAGAATGCATCGTGGCAATCCTTAAGCAACAT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTCCAGTAAGTCAGTTTTaGATTTATTCAGTCTTACAC +
Preference number: 4 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGPVSQF*IYSVLH
Trigger: GTGTAAGACTGAATAAATCCAAAACTGACTTACTGG...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATCAATCAGCTTCACTCTaGAAGTCATTATGTACAAAG +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHQSASL*KSLCTK
Trigger: CTTTGTACATAATGACTTCCAGAGTGAAGCTGATTG...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAATCAGCTTCACTCTaGAAGTCATTATGTACAAAG +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVQSASL*KSLCTK
Trigger: CTTTGTACATAATGACTTCCAGAGTGAAGCTGATTG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CCA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATCGTTCTGAGATGGGTTaGCTCTTTATGATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHRSEMG*LFMIFL
Trigger: TAGAAAAATCATAAAGAGCCAACCCATCTCAGAACG...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR GCA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCCTTTAGTTATAATGTaGCAAGTGAGATTAGTAACC +
Preference number: 4 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVPLVIM*QVRLVT
Trigger: GGTTACTAATCTCACTTGGCACATTATAACTAAAGG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
3UTR CAA 72 bp GAGCCAGAACTGACTCTAATGCATGATGGAATATCTTaGTTGCATACGTACACTGTAGAAAATAATTATTCA +
Preference number: 4 (lower is better)
Translates to: EPELTLMHDGIS*LHTYTVENNYS
Trigger: TGAATAATTATTTTCTACAGTGTACGTATGCAACAAAGATATTCCATCATGCATTAGAGTCAGTTCTGGCTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS GCA 90 bp TCCTCCCCGGCGGCTGAACTTGACCCTGCTGACTCCAGGGGCTACTaGAGTTTGAAGTCGCTGGTTTCCAAAGCTCAGATGCCTCAGACC +
Preference number: 5 (lower is better)
Translates to: SSPAAELDPADSRGY*SLKSLVSKAQMPQT
Trigger: GGTCTGAGGCATCTGAGCTTTGGAAACCAGCGACTTCAAACTGCAGTAGCCCCTGGAGTCAGCAGGGTCAAGTTCAGCCGCCGGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451156.1
CDS TCA 90 bp CGGCGGCTGAACTTGACCCTGCTGACTCCAGGGGCTACTGCAGTTTaGAGTCGCTGGTTTCCAAAGCTCAGATGCCTCAGACCCACCAAA +
Preference number: 5 (lower is better)
Translates to: RRLNLTLLTPGATAV*SRWFPKLRCLRPTK
Trigger: TTTGGTGGGTCTGAGGCATCTGAGCTTTGGAAACCAGCGACTTCAAACTGCAGTAGCCCCTGGAGTCAGCAGGGTCAAGTTCAGCCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451156.1
CDS GCA 90 bp CCTCCACATTGGGACTATCCCTTAGAGTCTTTGTCTGCTCTTGGGTaGCAGACACAGGCGTCAGCAGCCCCAGGCTTGCTTGGGTGTATG +
Preference number: 5 (lower is better)
Translates to: PPHWDYPLESLSALG*QTQASAAPGLLGCM
Trigger: CATACACCCAAGCAAGCCTGGGGCTGCTGACGCCTGTGTCTGGCACCCAAGAGCAGACAAAGACTCTAAGGGATAGTCCCAATGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTCAGCAGCCCCAGGCTaGCTTGGGTGTATGACGGAC +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSSAAPG*LGCMTD
Trigger: GTCCGTCATACACCCAAGCAAGCCTGGGGCTGCTGA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS TCA 90 bp CTCTGTGCTTGCCCTGTTTCCTCTGTAGCCTTTGGTGACATCTTCTaGTCTTCCTTTGTCTCCAGTGAGTCCCCTGAGGGGGTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LCACPVSSVAFGDIF*SSFVSSESPEGVQA
Trigger: GGCCTGCACCCCCTCAGGGGACTCACTGGAGACAAAGGAAGATCAGAAGATGTCACCAAAGGCTACAGAGGAAACAGGGCAAGCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CCA 90 bp CTGTTGATTAATCGTCAAGAACACCCTCGGCAGCCCGAAAGATGGTaGCGCGGCGGCCAAAGCCATGAACCGTCTTCTGTTGTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: LLINRQEHPRQPERW*RGGQSHEPSSVVCR
Trigger: TCTGCAAACAACAGAAGACGGTTCATGGCTTTGGCCGCCGCGCCACCATCTTTCGGGCTGCCGAGGGTGTTCTTGACGATTAATCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
CDS CCA 90 bp CATCTGTTGATTAATCGTCAAGAACACCCTCGGCAGCCCGAAAGATaGTGGCGCGGCGGCCAAAGCCATGAACCGTCTTCTGTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: HLLINRQEHPRQPER*WRGGQSHEPSSVVC
Trigger: GCAAACAACAGAAGACGGTTCATGGCTTTGGCCGCCGCGCCACCATCTTTCGGGCTGCCGAGGGTGTTCTTGACGATTAATCAACAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGGTGCCGGGTCTGGGTaGTCATTCACCAGTAAGTCA +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSGAGSG*SFTSKS
Trigger: TGACTTACTGGTGAATGACAACCCAGACCCGGCACC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACTGGGCGGCCTCCACATaGGGACTATCCCTTAGAGTC +
Preference number: 5 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDWAAST*GLSLRV
Trigger: GACTCTAAGGGATAGTCCCAATGTGGAGGCCGCCCA...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS GCA 90 bp AAGGCCTGGGAGTCGAGTGAAGCTTCTGGTAGAGGCCACACGCGTTaGATACATATCCGCCATTTGCATTCTTTCGCCAGAGAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: KAWESSEASGRGHTR*IHIRHLHSFARERS
Trigger: AGACCTCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTATGCAACGCGTGTGGCCTCTACCAGAAGCTTCACTCGACTCCCAGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 90 bp TATCTGTTGATTAATCGTCAAGAACACCCTCGGCAGCCCGAAAGATaGTGGCGCGGCGGCCAAAGCCATGAACCGTCTTCTGTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: YLLINRQEHPRQPER*WRGGQSHEPSSVVC
Trigger: GCAAACAACAGAAGACGGTTCATGGCTTTGGCCGCCGCGCCACCATCTTTCGGGCTGCCGAGGGTGTTCTTGACGATTAATCAACAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220888.9
ENST00000519674.1
CDS CCA 90 bp GCTGCCCCTCTGCTGTTTGTTGAGCTGCTCAGCCTGAAGTGCCTCTaGGTTAAGGCGCTTTCTTGTTCTCCTCCTAATAATCTGCTCACC +
Preference number: 5 (lower is better)
Translates to: AAPLLFVELLSLKCL*VKALSCSPPNNLLT
Trigger: GGTGAGCAGATTATTAGGAGGAGAACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAACAAACAGCAGAGGGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCGGTGCAGGCCATATCTaGAGGGTCATCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFGAGHI*RVICLC
Trigger: GCAGAGGCAGATGACCCTCAAGATATGGCCTGCACC...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGCACTTGTGGGTTTTTaGAGGCCACTGAAACTGGGC +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSALVGF*RPLKLG
Trigger: GCCCAGTTTCAGTGGCCTCAAAAAACCCACAAGTGC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCTGCCCATCCGATCCTaGCAGGTGATTTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSLPIRS*QVICFL
Trigger: CAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCTCAGCAGCCCCAGGCTaGCTTGGGTGTATGACGGAC +
Preference number: 5 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLSAAPG*LGCMTD
Trigger: GTCCGTCATACACCCAAGCAAGCCTGGGGCTGCTGA...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGCCTTCGTTTTCTCCTaGGAGGCACCGTTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSAFVFS*EAPFAV
Trigger: AACTGCAAACGGTGCCTCCAAGGAGAAAACGAAGGC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS TCA 90 bp CTGTCCAGCTCAGCATCTTGCCTGGTGCGGTTATGCAGTCCTAAGTaGTACTTTCGGAAGTGCTTAATCAGATCTGTGGGGTCGTTGCCG +
Preference number: 5 (lower is better)
Translates to: LSSSASCLVRLCSPK*YFRKCLIRSVGSLP
Trigger: CGGCAACGACCCCACAGATCTGATTAAGCACTTCCGAAAGTATCACTTAGGACTGCATAACCGCACCAGGCAAGATGCTGAGCTGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 90 bp ACCCTGAAGTCAATTTTGGGCTCCTCTTTGATGGTGGATATGGCATaGCCGTCCTCTTCGCCGTTGGCTGTAGTGATGTCCTGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: TLKSILGSSLMVDMA*PSSSPLAVVMSCSW
Trigger: CCAGGAACAGGACATCACTACAGCCAACGGCGAAGAGGACGGTCATGCCATATCCACCATCAAAGAGGAGCCCAAAATTGACTTCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 90 bp TGCTCCTCATTGCTGCCCCTCTGCTGTTTGTTGAGCTGCTCAGCCTaGAGTGCCTCTGGGTTAAGGCGCTTTCTTGTTCTCCTCCTAATA +
Preference number: 5 (lower is better)
Translates to: CSSLLPLCCLLSCSA*SASGLRRFLVLLLI
Trigger: TATTAGGAGGAGAACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAACAAACAGCAGAGGGGCAGCAATGAGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTCTTCTGATCTTCCTTaGTCTCCAGTGAGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSSSDLP*SPVSPL
Trigger: CAGGGGACTCACTGGAGACAAAGGAAGATCAGAAGA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGACAGGCCTTGAAGAATaGATGTCCTGCAGCACACCA +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSTGLEE*MSCSTP
Trigger: TGGTGTGCTGCAGGACATCAATTCTTCAAGGCCTGT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTATCCCTTAGAGTCTTaGTCTGCTCTTGGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSYPLES*SALGCQ
Trigger: CTGGCACCCAAGAGCAGACAAAGACTCTAAGGGATA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCCGGGCTTCCATTGACTaGCTCCTCATTGCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLRASID*LLIAAP
Trigger: AGGGGCAGCAATGAGGAGCAAGTCAATGGAAGCCCG...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGAGCCCCCAGAAAACTaGCAGTGGCGGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGEPPEN*QWRRRR
Trigger: CCGCCGCCGCCGCCACTGCAAGTTTTCTGGGGGCTC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640765.1
CDS TCA 90 bp TTGCGGAGACTTCAAGGGCTCACAGACTCCCCCAGCAGCTGGAGATaGGAAAGCCAACATATTTCTGTCTGTCACCTCATCATGCGGAAA +
Preference number: 5 (lower is better)
Translates to: LRRLQGLTDSPSSWR*ESQHISVCHLIMRK
Trigger: TTTCCGCATGATGAGGTGACAGACAGAAATATGTTGGCTTTCTCATCTCCAGCTGCTGGGGGAGTCTGTGAGCCCTTGAAGTCTCCGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 90 bp TCTCCTTGGAGGCACCGTTTGCAGTTGGCCCAGGTCTGGAATGCTTaGTCGCCAAATCTAGAGGAATGTCATTGTCTGATCCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: SPWRHRLQLAQVWNA*SPNLEECHCLIQQL
Trigger: CAGCTGTTGGATCAGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAACGGTGCCTCCAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCGGCCCTCGCCTTCACTaGCAACGTTTCTCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLGPRLH*QRFSEG
Trigger: CCCCTCTGAGAAACGTTGCAAGTGAAGGCGAGGGCC...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCACCTTGACAATTGGCTaGACCACTCTGTGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFTLTIG*TTLCLP
Trigger: GGGCAAGCACAGAGTGGTCAAGCCAATTGTCAAGGT...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGAACTGGGCTCAAACCTaGACAATTGGCTTGACCACT +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSNWAQT*TIGLTT
Trigger: AGTGGTCAAGCCAATTGTCAAGGTTTGAGCCCAGTT...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGTTTGACATCCGATGCTaGGGACTCATGCACACTTTC +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSFDIRC*GLMHTF
Trigger: GAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAA...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCTGCCCATCCGATCCTaGCAGGTGATTTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFLPIRS*QVICFL
Trigger: CAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGTGTTCTTTGCTTTCCTaGACAGACTGCTGCCCATCC +
Preference number: 5 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPCSLLS*TDCCPS
Trigger: GGATGGGCAGCAGTCTGTCAAGGAAAGCAAAGAACA...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTCAGCAGCCCCAGGCTaGCTTGGGTGTATGACGGAC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLSAAPG*LGCMTD
Trigger: GTCCGTCATACACCCAAGCAAGCCTGGGGCTGCTGA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGACTGGGATTCATCCTaGGACTTGTTTTCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSDWDSS*DLFSPD
Trigger: ATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGTC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCTTGACTTGCTCCTCATaGCTGCCCCTCTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFLTCSS*LPLCCL
Trigger: CAAACAGCAGAGGGGCAGCAATGAGGAGCAAGTCAA...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTCCTTGGAGGCACCGTTaGCAGTTGGCCCAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIPWRHR*QLAQVW
Trigger: CCAGACCTGGGCCAACTGCAAACGGTGCCTCCAAGG...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGCATCTGTCATGTTGCTaGCTGCACTCTAACCAAGCC +
Preference number: 5 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPHLSCC*LHSNQA
Trigger: GGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATG...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS TCA 90 bp ACTTTCATAGTGAAAGAGGAGTACATCTACGTCAGGGGTGGTGAATaGACACTGATGGCACTGATGTTTGACTCGCGAGCTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: TFIVKEEYIYVRGGE*TLMALMFDSRASSR
Trigger: GCGGCTGGAAGCTCGCGAGTCAAACATCAGTGCCATCAGTGTTCATTCACCACCCCTGACGTAGATGTACTCCTCTTTCACTATGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 90 bp CATTGCGAAGGTCATCACTGGAACTCTCGGTCCAAACTTTCTCTTTaGGCCCGTCCTTCTCTTCCAGCTTCTCTCTCTTCACCACACTCT +
Preference number: 5 (lower is better)
Translates to: HCEGHHWNSRSKLSL*ARPSLPASLSSPHS
Trigger: AGAGTGTGGTGAAGAGAGAGAAGCTGGAAGAGAAGGACGGGCTCAAAGAGAAAGTTTGGACCGAGAGTTCCAGTGATGACCTTCGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 90 bp TCGCGAGCTTCCAGCCGCCCCAGGAGACAAGTGCAGAAGCAAGAGTaGACAGTGGGAACAATTACTTTTTCTACAAGCAAACGGATAAGT +
Preference number: 5 (lower is better)
Translates to: SRASSRPRRQVQKQE*TVGTITFSTSKRIS
Trigger: ACTTATCCGTTTGCTTGTAGAAAAAGTAATTGTTCCCACTGTGCACTCTTGCTTCTGCACTTGTCTCCTGGGGCGGCTGGAAGCTCGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 90 bp GCTTTCCTTGACAGACTGCTGCCCATCCGATCCTTGCAGGTGATTTaGTTCTTGTTTGACATCCGATGCTTGGGACTCATGCACACTTTC +
Preference number: 5 (lower is better)
Translates to: AFLDRLLPIRSLQVI*FLFDIRCLGLMHTF
Trigger: GAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAGCAGTCTGTCAAGGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGGTGCAGGCCATATCTaGAGGGTCATCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLGAGHI*RVICLC
Trigger: GCAGAGGCAGATGACCCTCAAGATATGGCCTGCACC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGTCCAGCTCAGCATCTaGCCTGGTGCGGTTATGCAG +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLVQLSI*PGAVMQ
Trigger: CTGCATAACCGCACCAGGCAAGATGCTGAGCTGGAC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGTTTGACATCCGATGCTaGGGACTCATGCACACTTTC +
Preference number: 5 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPFDIRC*GLMHTF
Trigger: GAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAA...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCAGGTGATTTGCTTCTaGTTTGACATCCGATGCTTG +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSQVICF*FDIRCL
Trigger: CAAGCATCGGATGTCAAACAAGAAGCAAATCACCTG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCCGTCCTCTTCGCCGTaGGCTGTAGTGATGTCCTGT +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLPSSSP*AVVMSC
Trigger: ACAGGACATCACTACAGCCAACGGCGAAGAGGACGG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATCCGTCCTCTTCGCCGTaGGCTGTAGTGATGTCCTGT +
Preference number: 5 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNPSSSP*AVVMSC
Trigger: ACAGGACATCACTACAGCCAACGGCGAAGAGGACGG...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTGGGCGGCCTCCACATaGGGACTATCCCTTAGAGTC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLWAAST*GLSLRV
Trigger: GACTCTAAGGGATAGTCCCAATGTGGAGGCCGCCCA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCCCTGCAGGAATCCCTaGGTTTCCACAGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLPCRNP*VSTAKP
Trigger: TGGCTTGGCTGTGGAAACCAAGGGATTCCTGCAGGG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCGGGCTTCCATTGACTaGCTCCTCATTGCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLRASID*LLIAAP
Trigger: AGGGGCAGCAATGAGGAGCAAGTCAATGGAAGCCCG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGAAGGGAATTTCATGTaGGATAAGGCAGGCTCTATG +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSEGNFM*DKAGSM
Trigger: CATAGAGCCTGCCTTATCCAACATGAAATTCCCTTC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS TCA 90 bp GCGGAAAGGAGGGAAAGTTTCCTCCCTTACTGGGGCTTTCATAATTaGAGCCAGCCTTCTCACTCAGAACTGCGCTTTTCAAGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: AERRESFLPYWGFHN*SQPSHSELRFSSPS
Trigger: AGAAGGACTTGAAAAGCGCAGTTCTGAGTGAGAAGGCTGGCTTCAATTATGAAAGCCCCAGTAAGGGAGGAAACTTTCCCTCCTTTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395713.6
ENST00000395715.8
ENST00000517323.2
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 90 bp TCTTTGCTTTCCTTGACAGACTGCTGCCCATCCGATCCTTGCAGGTaGTTTGCTTCTTGTTTGACATCCGATGCTTGGGACTCATGCACA +
Preference number: 5 (lower is better)
Translates to: SLLSLTDCCPSDPCR*FASCLTSDAWDSCT
Trigger: TGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAGCAGTCTGTCAAGGAAAGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 90 bp GTTTTCTCCTTGGAGGCACCGTTTGCAGTTGGCCCAGGTCTGGAATaGTTGATCGCCAAATCTAGAGGAATGTCATTGTCTGATCCAACA +
Preference number: 5 (lower is better)
Translates to: VFSLEAPFAVGPGLE*LIAKSRGMSLSDPT
Trigger: TGTTGGATCAGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAACGGTGCCTCCAAGGAGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS GCA 90 bp CCCCTCTGGATATGTGTTGTGAAGTCATATTTGTCCGTGCAAAGATaGTGGCATATGCTGCACTGGAAAGGTCCACTGTCACCATGGCAA +
Preference number: 5 (lower is better)
Translates to: PLWICVVKSYLSVQR*WHMLHWKGPLSPWQ
Trigger: TTGCCATGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 90 bp ACAGAGGTGCCGGGTCTGGGTTGTCATTCACCAGTAAGTCAGTTTTaGATTTATTCAGTCTTACACCCCCATCTGAAGGCACTTGTGGGT +
Preference number: 5 (lower is better)
Translates to: TEVPGLGCHSPVSQF*IYSVLHPHLKALVG
Trigger: ACCCACAAGTGCCTTCAGATGGGGGTGTAAGACTGAATAAATCCAAAACTGACTTACTGGTGAATGACAACCCAGACCCGGCACCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATGGCCCTCGCCTTCACTaGCAACGTTTCTCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYGPRLH*QRFSEG
Trigger: CCCCTCTGAGAAACGTTGCAAGTGAAGGCGAGGGCC...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGGGCCCTCGCCTTCACTaGCAACGTTTCTCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVGPRLH*QRFSEG
Trigger: CCCCTCTGAGAAACGTTGCAAGTGAAGGCGAGGGCC...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCGGTGCCGGGTCTGGGTaGTCATTCACCAGTAAGTCA +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLGAGSG*SFTSKS
Trigger: TGACTTACTGGTGAATGACAACCCAGACCCGGCACC...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGCAGGTGATTTGCTTCTaGTTTGACATCCGATGCTTG +
Preference number: 5 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPQVICF*FDIRCL
Trigger: CAAGCATCGGATGTCAAACAAGAAGCAAATCACCTG...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTCCGTCCTCTTCGCCGTaGGCTGTAGTGATGTCCTGT +
Preference number: 5 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIPSSSP*AVVMSC
Trigger: ACAGGACATCACTACAGCCAACGGCGAAGAGGACGG...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGCCAGAGAGAGGTCTTaGTGGTCAGGCAATTGGCAC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLARERS*WSGNWH
Trigger: GTGCCAATTGCCTGACCACAAAGACCTCTCTCTGGC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCCTGGTGGTGAATAATTaGGGTGTTTCGCAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFLVVNN*GVSQVS
Trigger: TGAGACCTGCGAAACACCCAAATTATTCACCACCAG...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCAGGCACCGTTTGCAGTaGGCCCAGGTCTGGAATGCT +
Preference number: 5 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFRHRLQ*AQVWNA
Trigger: AGCATTCCAGACCTGGGCCAACTGCAAACGGTGCCT...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACCTTGGAGGCACCGTTaGCAGTTGGCCCAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKPWRHR*QLAQVW
Trigger: CCAGACCTGGGCCAACTGCAAACGGTGCCTCCAAGG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS TCA 90 bp CAGACTGCTGCCCATCCGATCCTTGCAGGTGATTTGCTTCTTGTTTaGCATCCGATGCTTGGGACTCATGCACACTTTCATAGTGAAAGA +
Preference number: 5 (lower is better)
Translates to: QTAAHPILAGDLLLV*HPMLGTHAHFHSER
Trigger: TCTTTCACTATGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAGCAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 90 bp CCACTTGTGCATTGTTCCTATGCAGGCCCCTCTGGATATGTGTTGTaGAGTCATATTTGTCCGTGCAAAGATGCTGGCATATGCTGCACT +
Preference number: 5 (lower is better)
Translates to: PLVHCSYAGPSGYVL*SHICPCKDAGICCT
Trigger: AGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCATAGGAACAATGCACAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 90 bp CTCTGGATATGTGTTGTGAAGTCATATTTGTCCGTGCAAAGATGCTaGCATATGCTGCACTGGAAAGGTCCACTGTCACCATGGCAACTC +
Preference number: 5 (lower is better)
Translates to: LWICVVKSYLSVQRC*HMLHWKGPLSPWQL
Trigger: GAGTTGCCATGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGTTCTTTCCAGATACCTaGCTTTCTGTACCTATAGGC +
Preference number: 5 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPFFPDT*LSVPIG
Trigger: GCCTATAGGTACAGAAAGCAAGGTATCTGGAAAGAA...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAGGTGCAGGCCATATCTaGAGGGTCATCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: IILGTPMVPFNQGSQSALGAGHI*RVICLC
Trigger: GCAGAGGCAGATGACCCTCAAGATATGGCCTGCACC...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGCACTTGTGGGTTTTTaGAGGCCACTGAAACTGGGC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLALVGF*RPLKLG
Trigger: GCCCAGTTTCAGTGGCCTCAAAAAACCCACAAGTGC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAGTCCAGCTCAGCATCTaGCCTGGTGCGGTTATGCAG +
Preference number: 5 (lower is better)
Translates to: IILGTPMVPFNQGSQSALVQLSI*PGAVMQ
Trigger: CTGCATAACCGCACCAGGCAAGATGCTGAGCTGGAC...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCGAAAACACAGAACGGTaGACCTTCTGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFENTER*TFWKSL
Trigger: CAAAGACTTCCAGAAGGTCAACCGTTCTGTGTTTTC...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCGGCCTCTGTACCATTTaGTCTAGAGGAATCGAGGGG +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLGLCTI*SRGIEG
Trigger: CCCCTCGATTCCTCTAGACAAAATGGTACAGAGGCC...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACAATGTTATGGAGCTGTaGATAATGACGGAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDNVMEL*IMTEKW
Trigger: CCACTTCTCCGTCATTATCAACAGCTCCATAACATT...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCCCTGCAGGAATCCCTaGGTTTCCACAGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYPCRNP*VSTAKP
Trigger: TGGCTTGGCTGTGGAAACCAAGGGATTCCTGCAGGG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCCCTGCAGGAATCCCTaGGTTTCCACAGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVPCRNP*VSTAKP
Trigger: TGGCTTGGCTGTGGAAACCAAGGGATTCCTGCAGGG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TCTCAACTTAAGGCAAAAGGCTGGCATACAGCACAGAAGCAGACCACCAGCTTCATACATATCCGCCATTaGCATTCTTTCGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SQLKAKGWHTAQKQTTSFIHIRH*HSFARE
Trigger: CTCTCTGGCGAAAGAATGCAAATGGCGGATATGTAT...GAAGCTGGTGGTCTGCTTCTGTGCTGTATGCCAGCCTTTTGCCTTAAGTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCTGAATGTGCAAAGGTaGCATCCTTTTGTGAATATC +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSLNVQR*HPFVNI
Trigger: GATATTCACAAAAGGATGCAACCTTTGCACATTCAG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATAGTTTTGGCAAGGATTaGGTAGGCCAGGCACGTGAC +
Preference number: 5 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNSFGKD*VGQARD
Trigger: GTCACGTGCCTGGCCTACCAAATCCTTGCCAAAACT...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATGCCTTCGTTTTCTCCTaGGAGGCACCGTTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNAFVFS*EAPFAV
Trigger: AACTGCAAACGGTGCCTCCAAGGAGAAAACGAAGGC...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTTCCATGCCTCTGCCCTaGGCCGTCTTTCTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIISMPLP*AVFLWE
Trigger: TTCCCAAAGAAAGACGGCCAAGGGCAGAGGCATGGA...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS TCA 90 bp CTCTGTACCATTTTGTCTAGAGGAATCGAGGGGCTTTATGGGCACTaGGTACCCAACAGGAGTGTCATCTCCTGCTTTGACTGTTATCTT +
Preference number: 5 (lower is better)
Translates to: LCTILSRGIEGLYGH*VPNRSVISCFDCYL
Trigger: AAGATAACAGTCAAAGCAGGAGATGACACTCCTGTTGGGTACTCAGTGCCCATAAAGCCCCTCGATTCCTCTAGACAAAATGGTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 90 bp CCCATCCGATCCTTGCAGGTGATTTGCTTCTTGTTTGACATCCGATaGTTGGGACTCATGCACACTTTCATAGTGAAAGAGGAGTACATC +
Preference number: 5 (lower is better)
Translates to: PIRSLQVICFLFDIR*LGLMHTFIVKEEYI
Trigger: GATGTACTCCTCTTTCACTATGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 90 bp CATATGCTGCACTGGAAAGGTCCACTGTCACCATGGCAACTCATATaGAAAGCATACATCACTTCATCCAGAAAGACAATGCCACAGTGC +
Preference number: 5 (lower is better)
Translates to: HMLHWKGPLSPWQLI*KAYITSSRKTMPQC
Trigger: GCACTGTGGCATTGTCTTTCTGGATGAAGTGATGTATGCTTTGCATATGAGTTGCCATGGTGACAGTGGACCTTTCCAGTGCAGCATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 90 bp GACGGAGAAGTGGCCCCACTACAATTACATCAGGGCCATGGCTTTTaGAATATCGGAAGTCACAGAACTGACAATTATAGCTCGTTACCA +
Preference number: 5 (lower is better)
Translates to: DGEVAPLQLHQGHGF*NIGSHRTDNYSSLP
Trigger: TGGTAACGAGCTATAATTGTCAGTTCTGTGACTTCCGATATTCCAAAAGCCATGGCCCTGATGTAATTGTAGTGGGGCCACTTCTCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTCTTCTGATCTTCCTTaGTCTCCAGTGAGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLSSDLP*SPVSPL
Trigger: CAGGGGACTCACTGGAGACAAAGGAAGATCAGAAGA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGGGTGCCGGGTCTGGGTaGTCATTCACCAGTAAGTCA +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVGAGSG*SFTSKS
Trigger: TGACTTACTGGTGAATGACAACCCAGACCCGGCACC...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAGTCCAGCTCAGCATCTaGCCTGGTGCGGTTATGCAG +
Preference number: 5 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKVQLSI*PGAVMQ
Trigger: CTGCATAACCGCACCAGGCAAGATGCTGAGCTGGAC...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGACCTTCTGGAAGTCTTaGGAATGGCTGAACTGCACC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLTFWKS*EWLNCT
Trigger: GGTGCAGTTCAGCCATTCCAAAGACTTCCAGAAGGT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCACCTTCTGGAAGTCTTaGGAATGGCTGAACTGCACC +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLTFWKS*EWLNCT
Trigger: GGTGCAGTTCAGCCATTCCAAAGACTTCCAGAAGGT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGGCCCCACTCGAGCTCTaGTCTGTCTTGGTCATTGTC +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVAPLEL*SVLVIV
Trigger: GACAATGACCAAGACAGACAAGAGCTCGAGTGGGGC...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTTATCCTCGGCTCCCTaGCTGGAGAAGTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLLSSAP*LEKSFF
Trigger: AAAGAAGGACTTCTCCAGCAAGGGAGCCGAGGATAA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTCAGGGCCATGGCTTTaGGAATATCGGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLSGPWL*EYRKSQ
Trigger: CTGTGACTTCCGATATTCCAAAAGCCATGGCCCTGA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTGTTCTTTGCTTTCCTaGACAGACTGCTGCCCATCC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLCSLLS*TDCCPS
Trigger: GGATGGGCAGCAGTCTGTCAAGGAAAGCAAAGAACA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTGGGCGGCCTCCACATaGGGACTATCCCTTAGAGTC +
Preference number: 5 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLWAAST*GLSLRV
Trigger: GACTCTAAGGGATAGTCCCAATGTGGAGGCCGCCCA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGGCCAGAGAGAGGTCTTaGTGGTCAGGCAATTGGCAC +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVARERS*WSGNWH
Trigger: GTGCCAATTGCCTGACCACAAAGACCTCTCTCTGGC...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTCGGGCTTCCATTGACTaGCTCCTCATTGCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGRASID*LLIAAP
Trigger: AGGGGCAGCAATGAGGAGCAAGTCAATGGAAGCCCG...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTCTAACGGGCTTCCATaGACTTGCTCCTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLSNGLP*TCSSLL
Trigger: CAGCAATGAGGAGCAAGTCAATGGAAGCCCGTTAGA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCCAGGTCTGGAATGCTaGATCGCCAAATCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLPGLEC*IAKSRG
Trigger: TCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGG...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCCAGAAATGTTATCGCTaGTCAGGACCTCAGTCTCCG +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLQKCYR*SGPQSP
Trigger: CGGAGACTGAGGTCCTGACAAGCGATAACATTTCTG...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGCATGATGGAATATCTTaGTTGCATACGTACACTGTA +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSHDGIS*LHTYTV
Trigger: TACAGTGTACGTATGCAACAAAGATATTCCATCATG...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATACAGTCACGAACTGGTaGAACTCTACCTGCCATCCA +
Preference number: 5 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNTVTNW*NSTCHP
Trigger: TGGATGGCAGGTAGAGTTCAACCAGTTCGTGACTGT...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCCACCATCTGTCATGTTGCTTGCTGCACTCTAACCAAGCCTAACCACAGCTCGGTCTGGCTATACATTTaGAGATGCATCCATCAAAAT +
Preference number: 5 (lower is better)
Translates to: ATICHVACCTLTKPNHSSVWLYI*RCIHQN
Trigger: ATTTTGATGGATGCATCTCAAAATGTATAGCCAGAC...CGAGCTGTGGTTAGGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCCTTCATGTGACATACTaGACATACTTCTGCCCTAGC +
Preference number: 5 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLLHVTY*TYFCPS
Trigger: GCTAGGGCAGAAGTATGTCAAGTATGTCACATGAAG...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGCTGCCTGAAGATTGTTaGCATAAGAAATACACCAAG +
Preference number: 5 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPLPEDC*HKKYTK
Trigger: CTTGGTGTATTTCTTATGCAAACAATCTTCAGGCAG...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS TCA 90 bp GTACATATGGAAGACGTGGTTGCCAAGGTTAATAAGACAGAATCTTaGATCCCAGTTGATGAGGCTGGACCACTTGGAGAAAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VHMEDVVAKVNKTES*IPVDEAGPLGESRK
Trigger: CTTCCTGCTTTCTCCAAGTGGTCCAGCCTCATCAACTGGGATTCAAGATTCTGTCTTATTAACCTTGGCAACCACGTCTTCCATATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422939.1
CDS TCA 90 bp GAGTACATCATTTTGTCTAGAGGAATCGAGGGGCTTTATGGGCACTaGGTACCCAACAGGAGTGTCATCTCCTGCTTTGACTGTTATCTT +
Preference number: 5 (lower is better)
Translates to: EYIILSRGIEGLYGH*VPNRSVISCFDCYL
Trigger: AAGATAACAGTCAAAGCAGGAGATGACACTCCTGTTGGGTACTCAGTGCCCATAAAGCCCCTCGATTCCTCTAGACAAAATGATGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517323.2
ENST00000519076.5
CDS CCA 90 bp GGTACACTTGTGAATGTTATGGAGCTGTTGATAATGACGGAGAAGTaGCCCCACTACAATTACATCAGGGCCATGGCTTTTGGAATATCG +
Preference number: 5 (lower is better)
Translates to: GTLVNVMELLIMTEK*PHYNYIRAMAFGIS
Trigger: CGATATTCCAAAAGCCATGGCCCTGATGTAATTGTAGTGGGGCCACTTCTCCGTCATTATCAACAGCTCCATAACATTCACAAGTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCTCTTCTGATCTTCCTTaGTCTCCAGTGAGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFSSDLP*SPVSPL
Trigger: CAGGGGACTCACTGGAGACAAAGGAAGATCAGAAGA...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTTGACCACTCTGTGCTaGCCCTGTTTCCTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSLTTLC*PCFLCS
Trigger: GCTACAGAGGAAACAGGGCAAGCACAGAGTGGTCAA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATAACTGGGCTCAAACCTaGACAATTGGCTTGACCACT +
Preference number: 5 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNNWAQT*TIGLTT
Trigger: AGTGGTCAAGCCAATTGTCAAGGTTTGAGCCCAGTT...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCATACTTGGTGTTCCCTaGGCAATCTGGTGTTTTCCG +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLILGVP*AIWCFP
Trigger: CGGAAAACACCAGATTGCCAAGGGAACACCAAGTAT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCAGTGCAGGGATGGACTaGTTAGAGTTTTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLSAGMD*LEFFSE
Trigger: TTCAGAGAAAAACTCTAACAAGTCCATCCCTGCACT...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTCCAGAATCACTGGATaGAAGTGCAGGGATGGACTT +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLSRITG*KCRDGL
Trigger: AAGTCCATCCCTGCACTTCAATCCAGTGATTCTGGA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCGTGTCATCTCCTGCTTaGACTGTTATCTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLVSSPA*TVILSC
Trigger: GCAGGACAAGATAACAGTCAAAGCAGGAGATGACAC...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCACCCTGAAGTCAATTTaGGGCTCCTCTTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLTLKSI*GSSLMV
Trigger: CACCATCAAAGAGGAGCCCAAAATTGACTTCAGGGT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTCCTCTCCAAGTCACATaGCGAAGGTCATCACTGGAA +
Preference number: 5 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIPLQVT*RRSSLE
Trigger: TTCCAGTGATGACCTTCGCAATGTGACTTGGAGAGG...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGACTGGGATTCATCCTaGGACTTGTTTTCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLDWDSS*DLFSPD
Trigger: ATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGTC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGCCAGAGAGAGGTCTTaGTGGTCAGGCAATTGGCAC +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGARERS*WSGNWH
Trigger: GTGCCAATTGCCTGACCACAAAGACCTCTCTCTGGC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGGTGAATATCCAGAGTTaGGCTGACCAGGACTGGCTG +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVVNIQS*ADQDWL
Trigger: CAGCCAGTCCTGGTCAGCCAAACTCTGGATATTCAC...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAATACTTGGCACTCCTATGGTGCCTTTCAACCAAGGATCTCAAAGTGCTTTAGTGAATATCCAGAGTTaGGCTGACCAGGACTGGCTG +
Preference number: 5 (lower is better)
Translates to: IILGTPMVPFNQGSQSALVNIQS*ADQDWL
Trigger: CAGCCAGTCCTGGTCAGCCAAACTCTGGATATTCAC...TAAAGCACTTTGAGATCCTTGGTTGAAAGGCACCATAGGAGTGCCAAGTATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATAGGCACCGTTTGCAGTaGGCCCAGGTCTGGAATGCT +
Preference number: 5 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHRHRLQ*AQVWNA
Trigger: AGCATTCCAGACCTGGGCCAACTGCAAACGGTGCCT...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGAACAATTTATGGGTTTaGGAACAAATGGTCCAATGG +
Preference number: 5 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPNNLWV*EQMVQW
Trigger: CCATTGGACCATTTGTTCCAAAACCCATAAATTGTT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCGACACAGAAGACATTTaGAGAGCTGATCTGTACATC +
Preference number: 5 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLDTEDI*RADLYI
Trigger: GATGTACAGATCAGCTCTCAAAATGTCTTCTGTGTC...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR CAA 90 bp CTTGTGCCTTGGACAGTCAGCAAGCTTTCACCTTACTGGCTCACCAAAGACGACGATGGAATATCTTTGTaGCATACGTACACTGTAGAA +
Preference number: 5 (lower is better)
Translates to: LVPWTVSKLSPYWLTKDDDGISL*HTYTVE
Trigger: TTCTACAGTGTACGTATGCAACAAAGATATTCCATC...GTCGTCTTTGGTGAGCCAGTAAGGTGAAAGCTTGCTGACTGTCCAAGGCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCTGCCCTTGGCCGTCTTTCTTTGGGAAAATAACAATGCCCTCCAAAGTCCCGAGCCTAGTAATAGTTTaGCATCTTCATAGTCAACAC +
Preference number: 5 (lower is better)
Translates to: LCPWPSFFGKITMPSKVPSLVIV*HLHSQH
Trigger: GTGTTGACTATGAAGATGCAAAACTATTACTAGGCT...CGGGACTTTGGAGGGCATTGTTATTTTCCCAAAGAAAGACGGCCAAGGGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS GCA 90 bp AGTGCCTCTGGGTTAAGGCGCTTTCTTGTTCTCCTCCTAATAATCTaGTCACCGTTGTTTTGTTTAATGATGTTTAAAGGCCTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: SASGLRRFLVLLLII*SPLFCLMMFKGLGV
Trigger: GACTCCCAGGCCTTTAAACATCATTAAACAAAACAACGGTGAGCAGATTATTAGGAGGAGAACAAGAAAGCGCCTTAACCCAGAGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 90 bp GAGAGCTTATATTTACTCCAGAACCGCAGCCAATCAGCTTCACTCTaGAAGTCATTATGTACAAAGGGAAGTCCAAAAAGTGGGTACTGG +
Preference number: 5 (lower is better)
Translates to: ESLYLLQNRSQSASL*KSLCTKGSPKSGYW
Trigger: CCAGTACCCACTTTTTGGACTTCCCTTTGTACATAATGACTTCCAGAGTGAAGCTGATTGGCTGCGGTTCTGGAGTAAATATAAGCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTACCTTGACAATTGGCTaGACCACTCTGTGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGTLTIG*TTLCLP
Trigger: GGGCAAGCACAGAGTGGTCAAGCCAATTGTCAAGGT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGCACTTGTGGGTTTTTaGAGGCCACTGAAACTGGGC +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGALVGF*RPLKLG
Trigger: GCCCAGTTTCAGTGGCCTCAAAAAACCCACAAGTGC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGAAAACACAGAACGGTaGACCTTCTGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLENTER*TFWKSL
Trigger: CAAAGACTTCCAGAAGGTCAACCGTTCTGTGTTTTC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCGCTTTGACTGTTATCTaGTCCTGCCATTTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLALTVI*SCHFPK
Trigger: CTTGGGAAAATGGCAGGACAAGATAACAGTCAAAGC...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGGCCTCTGTACCATTTaGTCTAGAGGAATCGAGGGG +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPGLCTI*SRGIEG
Trigger: CCCCTCGATTCCTCTAGACAAAATGGTACAGAGGCC...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCGCCCCACTCGAGCTCTaGTCTGTCTTGGTCATTGTC +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVAPLEL*SVLVIV
Trigger: GACAATGACCAAGACAGACAAGAGCTCGAGTGGGGC...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTCAGGGCCATGGCTTTaGGAATATCGGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSSGPWL*EYRKSQ
Trigger: CTGTGACTTCCGATATTCCAAAAGCCATGGCCCTGA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGTACATGAGTGTTCTTaGCTTTCCTTGACAGACTGC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLVHECS*LSLTDC
Trigger: GCAGTCTGTCAAGGAAAGCAAAGAACACTCATGTAC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGGTCCAAACTTTCTCTTaGAGCCCGTCCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVVQTFS*SPSFSS
Trigger: GGAAGAGAAGGACGGGCTCAAAGAGAAAGTTTGGAC...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTATCCCTTAGAGTCTTaGTCTGCTCTTGGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSYPLES*SALGCQ
Trigger: CTGGCACCCAAGAGCAGACAAAGACTCTAAGGGATA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCGATTCATCCTTGGACTaGTTTTCTCCCGATGCAGGA +
Preference number: 5 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFDSSLD*FSPDAG
Trigger: TCCTGCATCGGGAGAAAACAAGTCCAAGGATGAATC...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCATACATATCCGCCATTaGCATTCTTTCGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLIHIRH*HSFARE
Trigger: CTCTCTGGCGAAAGAATGCAAATGGCGGATATGTAT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGATACATATCCGCCATTaGCATTCTTTCGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLIHIRH*HSFARE
Trigger: CTCTCTGGCGAAAGAATGCAAATGGCGGATATGTAT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATTGACTTGCTCCTCATaGCTGCCCCTCTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPLTCSS*LPLCCL
Trigger: CAAACAGCAGAGGGGCAGCAATGAGGAGCAAGTCAA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTCTAACGGGCTTCCATaGACTTGCTCCTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSSNGLP*TCSSLL
Trigger: CAGCAATGAGGAGCAAGTCAATGGAAGCCCGTTAGA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGGTGAATATCCAGAGTTaGGCTGACCAGGACTGGCTG +
Preference number: 5 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLVNIQS*ADQDWL
Trigger: CAGCCAGTCCTGGTCAGCCAAACTCTGGATATTCAC...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAAGTTTTGGCAAGGATTaGGTAGGCCAGGCACGTGAC +
Preference number: 5 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKSFGKD*VGQARD
Trigger: GTCACGTGCCTGGCCTACCAAATCCTTGCCAAAACT...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGGTTGTGAAGTCATATTaGTCCGTGCAAAGATGCTGG +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLVVKSY*SVQRCW
Trigger: CCAGCATCTTTGCACGGACAAATATGACTTCACAAC...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCATCTGTCATGTTGCTaGCTGCACTCTAACCAAGCC +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYHLSCC*LHSNQA
Trigger: GGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCATCTGTCATGTTGCTaGCTGCACTCTAACCAAGCC +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVHLSCC*LHSNQA
Trigger: GGCTTGGTTAGAGTGCAGCAAGCAACATGACAGATG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TTGGAGTCATGTAGTGTCTCTCTCAATCCACAACGTTCTGAGATGGGTTGGCTCCATTTAATGAAGGGATaGGCTGGTACATATACCAAC +
Preference number: 5 (lower is better)
Translates to: LESCSVSLNPQRSEMGWLHLMKG*AGTYTN
Trigger: GTTGGTATATGTACCAGCCAATCCCTTCATTAAATG...GAGCCAACCCATCTCAGAACGTTGTGGATTGAGAGAGACACTACATGACTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGACAGTCACGAACTGGTaGAACTCTACCTGCCATCCA +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVTVTNW*NSTCHP
Trigger: TGGATGGCAGGTAGAGTTCAACCAGTTCGTGACTGT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCTTCATGTGACATACTaGACATACTTCTGCCCTAGC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLLHVTY*TYFCPS
Trigger: GCTAGGGCAGAAGTATGTCAAGTATGTCACATGAAG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS GCA 90 bp ATCTTCATGGAAGCAATGGAGATCTGGTTTTCTCAAAGACTAAACTaGTCTTCGGGAGTCATCCAAGCAGATTCAAAAACCCGTAACAGG +
Preference number: 5 (lower is better)
Translates to: IFMEAMEIWFSQRLN*SSGVIQADSKTRNR
Trigger: CCTGTTACGGGTTTTTGAATCTGCTTGGATGACTCCCGAAGAGCAGTTTAGTCTTTGAGAAAACCAGATCTCCATTGCTTCCATGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519674.1
CDS-3UTR CAA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCCTGTTGTTTGCAGAGTaGATCTTGGATTATTGCGGG +
Preference number: 5 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFLLFAE*ILDYCG
Trigger: CCCGCAATAATCCAAGATCAACTCTGCAAACAACAG...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395715.8
CDS-3UTR CAA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTTGACCACTCTGTGCTaGCCCTGTTTCCTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHLTTLC*PCFLCS
Trigger: GCTACAGAGGAAACAGGGCAAGCACAGAGTGGTCAA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCTTGACCACTCTGTGCTaGCCCTGTTTCCTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVLTTLC*PCFLCS
Trigger: GCTACAGAGGAAACAGGGCAAGCACAGAGTGGTCAA...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATAACTGGGCTCAAACCTaGACAATTGGCTTGACCACT +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYNWAQT*TIGLTT
Trigger: AGTGGTCAAGCCAATTGTCAAGGTTTGAGCCCAGTT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGACCTTCTGGAAGTCTTaGGAATGGCTGAACTGCACC +
Preference number: 5 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLTFWKS*EWLNCT
Trigger: GGTGCAGTTCAGCCATTCCAAAGACTTCCAGAAGGT...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAACAGGCCTTGAAGAATaGATGTCCTGCAGCACACCA +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPTGLEE*MSCSTP
Trigger: TGGTGTGCTGCAGGACATCAATTCTTCAAGGCCTGT...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTACAGGCCTTGAAGAATaGATGTCCTGCAGCACACCA +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGTGLEE*MSCSTP
Trigger: TGGTGTGCTGCAGGACATCAATTCTTCAAGGCCTGT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATATACTTGGTGTTCCCTaGGCAATCTGGTGTTTTCCG +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYILGVP*AIWCFP
Trigger: CGGAAAACACCAGATTGCCAAGGGAACACCAAGTAT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCAGTGCAGGGATGGACTaGTTAGAGTTTTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLSAGMD*LEFFSE
Trigger: TTCAGAGAAAAACTCTAACAAGTCCATCCCTGCACT...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTGCTTTGACTGTTATCTaGTCCTGCCATTTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIALTVI*SCHFPK
Trigger: CTTGGGAAAATGGCAGGACAAGATAACAGTCAAAGC...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCGGCCTCTGTACCATTTaGTCTAGAGGAATCGAGGGG +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVGLCTI*SRGIEG
Trigger: CCCCTCGATTCCTCTAGACAAAATGGTACAGAGGCC...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTGAGCTCTTGTCTGTCTaGGTCATTGTCTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSELLSV*VIVSPS
Trigger: AGAAGGAGAGACAATGACCAAGACAGACAAGAGCTC...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTTATCCTCGGCTCCCTaGCTGGAGAAGTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLLSSAP*LEKSFF
Trigger: AAAGAAGGACTTCTCCAGCAAGGGAGCCGAGGATAA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCTGCCCATCCGATCCTaGCAGGTGATTTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVLPIRS*QVICFL
Trigger: CAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTTGTTCTTTGCTTTCCTaGACAGACTGCTGCCCATCC +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGCSLLS*TDCCPS
Trigger: GGATGGGCAGCAGTCTGTCAAGGAAAGCAAAGAACA...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATACCCTGAAGTCAATTTaGGGCTCCTCTTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYTLKSI*GSSLMV
Trigger: CACCATCAAAGAGGAGCCCAAAATTGACTTCAGGGT...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAATATCCCTTAGAGTCTTaGTCTGCTCTTGGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKYPLES*SALGCQ
Trigger: CTGGCACCCAAGAGCAGACAAAGACTCTAAGGGATA...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTTGACTTGCTCCTCATaGCTGCCCCTCTGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHLTCSS*LPLCCL
Trigger: CAAACAGCAGAGGGGCAGCAATGAGGAGCAAGTCAA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATCTAACGGGCTTCCATaGACTTGCTCCTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPSNGLP*TCSSLL
Trigger: CAGCAATGAGGAGCAAGTCAATGGAAGCCCGTTAGA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCTGGTGGTGAATAATTaGGGTGTTTCGCAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYLVVNN*GVSQVS
Trigger: TGAGACCTGCGAAACACCCAAATTATTCACCACCAG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCTGGTGGTGAATAATTaGGGTGTTTCGCAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVLVVNN*GVSQVS
Trigger: TGAGACCTGCGAAACACCCAAATTATTCACCACCAG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCAGTTTTGGCAAGGATTaGGTAGGCCAGGCACGTGAC +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVSFGKD*VGQARD
Trigger: GTCACGTGCCTGGCCTACCAAATCCTTGCCAAAACT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGCCAGGTCTGGAATGCTaGATCGCCAAATCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLPGLEC*IAKSRG
Trigger: TCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGG...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCACCAGGTCTGGAATGCTaGATCGCCAAATCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPPGLEC*IAKSRG
Trigger: TCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGG...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATGCCTTCGTTTTCTCCTaGGAGGCACCGTTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHAFVFS*EAPFAV
Trigger: AACTGCAAACGGTGCCTCCAAGGAGAAAACGAAGGC...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS TCA 90 bp TATAGGACTGCCTCTCTCAGAACTTCCTTTCCCTTCAGATACGGATaGACTATTTCCTGGATCTCCAGTACTTTCCTGAGGACTTTTTAT +
Preference number: 5 (lower is better)
Translates to: YRTASLRTSFPFRYG*TISWISSTFLRTFY
Trigger: ATAAAAAGTCCTCAGGAAAGTACTGGAGATCCAGGAAATAGTTCATCCGTATCTGAAGGGAAAGGAAGTTCTGAGAGAGGCAGTCCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 90 bp TTTTCTACAAGCAAACGGATAAGTAATTTCTCCAAGGTGCTTTTCTaGGCTGCAAAGTCCTCTGGGACAGAATGGACAGTGTTTAATGGT +
Preference number: 5 (lower is better)
Translates to: FSTSKRISNFSKVLF*AAKSSGTEWTVFNG
Trigger: ACCATTAAACACTGTCCATTCTGTCCCAGAGGACTTTGCAGCCCAGAAAAGCACCTTGGAGAAATTACTTATCCGTTTGCTTGTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp TTAAATAACCCCCTTGGCCACATAATAATACTTGGCACTCCTATGGTGCCTTTCGCTAGAAGATGGATCTaGAACATGCAAGCTATGTTC +
Preference number: 5 (lower is better)
Translates to: LNNPLGHIIILGTPMVPFARRWI*NMQAMF
Trigger: GAACATAGCTTGCATGTTCAAGATCCATCTTCTAGC...GAAAGGCACCATAGGAGTGCCAAGTATTATTATGTGGCCAAGGGGGTTATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GACCGGTCACTTTGTGATGTTTTGCAGCCACACAACAGGAGGCTAATAATTATTGCTAGAAGATGGATCTaGAACATGCAAGCTATGTTC +
Preference number: 5 (lower is better)
Translates to: DRSLCDVLQPHNRRLIIIARRWI*NMQAMF
Trigger: GAACATAGCTTGCATGTTCAAGATCCATCTTCTAGC...AATAATTATTAGCCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGACCGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTTTACAGCGGAAATACTaGGTGTTCCCTTGGCAATCT +
Preference number: 5 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSLQRKY*VFPWQS
Trigger: AGATTGCCAAGGGAACACCAAGTATTTCCGCTGTAA...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATTTTCTCTGAAGGTTTaGCAACCTCAGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPFSLKV*QPQRRG
Trigger: TCCCCTCCTCTGAGGTTGCAAAACCTTCAGAGAAAA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCATTTTCTCTGAAGGTTTaGCAACCTCAGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSFSLKV*QPQRRG
Trigger: TCCCCTCCTCTGAGGTTGCAAAACCTTCAGAGAAAA...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGTCCAGAATCACTGGATaGAAGTGCAGGGATGGACTT +
Preference number: 5 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLSRITG*KCRDGL
Trigger: AAGTCCATCCCTGCACTTCAATCCAGTGATTCTGGA...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGTGTCATCTCCTGCTTaGACTGTTATCTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGVSSPA*TVILSC
Trigger: GCAGGACAAGATAACAGTCAAAGCAGGAGATGACAC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGGTGTCATCTCCTGCTTaGACTGTTATCTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLVSSPA*TVILSC
Trigger: GCAGGACAAGATAACAGTCAAAGCAGGAGATGACAC...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGAGCTCTTGTCTGTCTaGGTCATTGTCTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPELLSV*VIVSPS
Trigger: AGAAGGAGAGACAATGACCAAGACAGACAAGAGCTC...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAGAGCTCTTGTCTGTCTaGGTCATTGTCTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSELLSV*VIVSPS
Trigger: AGAAGGAGAGACAATGACCAAGACAGACAAGAGCTC...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCTTATCCTCGGCTCCCTaGCTGGAGAAGTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVLSSAP*LEKSFF
Trigger: AAAGAAGGACTTCTCCAGCAAGGGAGCCGAGGATAA...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTCAGGGCCATGGCTTTaGGAATATCGGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHSGPWL*EYRKSQ
Trigger: CTGTGACTTCCGATATTCCAAAAGCCATGGCCCTGA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCAGGTGATTTGCTTCTaGTTTGACATCCGATGCTTG +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVQVICF*FDIRCL
Trigger: CAAGCATCGGATGTCAAACAAGAAGCAAATCACCTG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCGTCCAAACTTTCTCTTaGAGCCCGTCCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVVQTFS*SPSFSS
Trigger: GGAAGAGAAGGACGGGCTCAAAGAGAAAGTTTGGAC...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCCTCTCCAAGTCACATaGCGAAGGTCATCACTGGAA +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVPLQVT*RRSSLE
Trigger: TTCCAGTGATGACCTTCGCAATGTGACTTGGAGAGG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGATTCATCCTTGGACTaGTTTTCTCCCGATGCAGGA +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGDSSLD*FSPDAG
Trigger: TCCTGCATCGGGAGAAAACAAGTCCAAGGATGAATC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAGATTCATCCTTGGACTaGTTTTCTCCCGATGCAGGA +
Preference number: 5 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKDSSLD*FSPDAG
Trigger: TCCTGCATCGGGAGAAAACAAGTCCAAGGATGAATC...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGCTGAATGTGCAAAGGTaGCATCCTTTTGTGAATATC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLLNVQR*HPFVNI
Trigger: GATATTCACAAAAGGATGCAACCTTTGCACATTCAG...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTGTTGTGAAGTCATATTaGTCCGTGCAAAGATGCTGG +
Preference number: 5 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSVVKSY*SVQRCW
Trigger: CCAGCATCTTTGCACGGACAAATATGACTTCACAAC...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTTCACTTTGTGATGTTTaGCAGCCACACAACAGGAGG +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGSLCDV*QPHNRR
Trigger: CCTCCTGTTGTGTGGCTGCAAAACATCACAAAGTGA...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACTGTTGTTTGCAGAGTaGATCTTGGATTATTGCGGG +
Preference number: 5 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKLLFAE*ILDYCG
Trigger: CCCGCAATAATCCAAGATCAACTCTGCAAACAACAG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220888.9
ENST00000395715.8
CDS-3UTR CAA 90 bp GCAGTTATGCTGAGGAGCTTTCCCTTCATGGATAGTTTTTACAAAGCCTTAAGTATGAACCGTCTTCTGTaGTTTGCAGAGTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: AVMLRSFPFMDSFYKALSMNRLL*FAELIL
Trigger: CAAGATCAACTCTGCAAACAACAGAAGACGGTTCAT...ACTTAAGGCTTTGTAAAAACTATCCATGAAGGGAAAGCTCCTCAGCATAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220888.9
ENST00000395715.8
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATTCCGGACCATATCTGTaGATTAATCGTCAAGAACAC +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYSGPYL*INRQEH
Trigger: GTGTTCTTGACGATTAATCAACAGATATGGTCCGGA...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220888.9
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGTCTGCAGAAAATTCTTaGTTCTTTCCAGATACCTTG +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLSAENS*FFPDTL
Trigger: CAAGGTATCTGGAAAGAACAAAGAATTTTCTGCAGA...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTTCTTTACTCCACATTTCCACCACTGGATGGCAGATATTCCCCCTCTAGAAATTCTGCAGAAAATTCTTaGTTCTTTCCAGATACCTTG +
Preference number: 5 (lower is better)
Translates to: LLYSTFPPLDGRYSPSRNSAENS*FFPDTL
Trigger: CAAGGTATCTGGAAAGAACAAAGAATTTTCTGCAGA...ATTTCTAGAGGGGGAATATCTGCCATCCAGTGGTGGAAATGTGGAGTAAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTGAGAGGGCGCCATTTTTCTTTCATTGCCCTGGACCTTCAATTTCTCCTCTCTGCAGAAAATTCTTaGTTCTTTCCAGATACCTTG +
Preference number: 5 (lower is better)
Translates to: KLRGRHFSFIALDLQFLLSAENS*FFPDTL
Trigger: CAAGGTATCTGGAAAGAACAAAGAATTTTCTGCAGA...GAGGAGAAATTGAAGGTCCAGGGCAATGAAAGAAAAATGGCGCCCTCTCAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCATACTTGGTGTTCCCTaGGCAATCTGGTGTTTTCCG +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVILGVP*AIWCFP
Trigger: CGGAAAACACCAGATTGCCAAGGGAACACCAAGTAT...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAATTACAGCGGAAATACTaGGTGTTCCCTTGGCAATCT +
Preference number: 5 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKLQRKY*VFPWQS
Trigger: AGATTGCCAAGGGAACACCAAGTATTTCCGCTGTAA...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCATTACAGCGGAAATACTaGGTGTTCCCTTGGCAATCT +
Preference number: 5 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSLQRKY*VFPWQS
Trigger: AGATTGCCAAGGGAACACCAAGTATTTCCGCTGTAA...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTTTTCTCTGAAGGTTTaGCAACCTCAGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHFSLKV*QPQRRG
Trigger: TCCCCTCCTCTGAGGTTGCAAAACCTTCAGAGAAAA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGAGTGCAGGGATGGACTaGTTAGAGTTTTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVSAGMD*LEFFSE
Trigger: TTCAGAGAAAAACTCTAACAAGTCCATCCCTGCACT...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTCCAGAATCACTGGATaGAAGTGCAGGGATGGACTT +
Preference number: 5 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHSRITG*KCRDGL
Trigger: AAGTCCATCCCTGCACTTCAATCCAGTGATTCTGGA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGCTTTGACTGTTATCTaGTCCTGCCATTTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGALTVI*SCHFPK
Trigger: CTTGGGAAAATGGCAGGACAAGATAACAGTCAAAGC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACATGAGTGTTCTTaGCTTTCCTTGACAGACTGC +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPVHECS*LSLTDC
Trigger: GCAGTCTGTCAAGGAAAGCAAAGAACACTCATGTAC...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATACCCTGAAGTCAATTTaGGGCTCCTCTTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHTLKSI*GSSLMV
Trigger: CACCATCAAAGAGGAGCCCAAAATTGACTTCAGGGT...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCGACTGGGATTCATCCTaGGACTTGTTTTCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVDWDSS*DLFSPD
Trigger: ATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGTC...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTGAAGGGAATTTCATGTaGGATAAGGCAGGCTCTATG +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGEGNFM*DKAGSM
Trigger: CATAGAGCCTGCCTTATCCAACATGAAATTCCCTTC...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGAACAATTTATGGGTTTaGGAACAAATGGTCCAATGG +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLNNLWV*EQMVQW
Trigger: CCATTGGACCATTTGTTCCAAAACCCATAAATTGTT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCTATCTTCTTCTCATTaGCAGTTGCCTGCTGATAGA +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYLSSSH*QLPADR
Trigger: TCTATCAGCAGGCAACTGCAAATGAGAAGAAGATAG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp CTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCACGTGCTATCTTCTTCTCATTaGCAGTTGCCTGCTGATAGA +
Preference number: 5 (lower is better)
Translates to: LPFLSREHMNVHCLVSHVLSSSH*QLPADR
Trigger: TCTATCAGCAGGCAACTGCAAATGAGAAGAAGATAG...CACGTGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGTACTGAGCCTAGTAATAGTTTaGCATCTTCATAGTCAACAC +
Preference number: 5 (lower is better)
Translates to: RQQFMGFGTNGPMASPVLSLVIV*HLHSQH
Trigger: GTGTTGACTATGAAGATGCAAAACTATTACTAGGCT...CAGTACTGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS GCA 90 bp GGCAACTCATATGCAAAGCATACATCACTTCATCCAGAAAGACAATaGCACAGTGCACACATTTTGTTGAAAGTTCATCTTGAGTACTTC +
Preference number: 5 (lower is better)
Translates to: GNSYAKHTSLHPERQ*HSAHILLKVHLEYF
Trigger: GAAGTACTCAAGATGAACTTTCAACAAAATGTGTGCACTGTGGCATTGTCTTTCTGGATGAAGTGATGTATGCTTTGCATATGAGTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTATGAACCGTCTTCTGTaGTTTGCAGAGTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGMNRLL*FAELIL
Trigger: CAAGATCAACTCTGCAAACAACAGAAGACGGTTCAT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220888.9
ENST00000395715.8
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTTTCTTTCCAGATACCTaGCTTTCTGTACCTATAGGC +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGFFPDT*LSVPIG
Trigger: GCCTATAGGTACAGAAAGCAAGGTATCTGGAAAGAA...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAGCTAGAAGATGGATCTaGAACATGCAAGCTATGTTC +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPARRWI*NMQAMF
Trigger: GAACATAGCTTGCATGTTCAAGATCCATCTTCTAGC...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TATACATTTAATGAAGGGATTGGCTGGTACATATACCAACTGTCAGTCTGTGGTAATGTTATGGAGCTGTaGATAATGACGGAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: YTFNEGIGWYIYQLSVCGNVMEL*IMTEKW
Trigger: CCACTTCTCCGTCATTATCAACAGCTCCATAACATT...ACCACAGACTGACAGTTGGTATATGTACCAGCCAATCCCTTCATTAAATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCAAATGTTATGGAGCTGTaGATAATGACGGAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPNVMEL*IMTEKW
Trigger: CCACTTCTCCGTCATTATCAACAGCTCCATAACATT...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATCTAGAGGAATGTCATaGTCTGATCCAACAGCTGAA +
Preference number: 5 (lower is better)
Translates to: KFRQQFMGFGTNGPMASPSRGMS*SDPTAE
Trigger: TTCAGCTGTTGGATCAGACAATGACATTCCTCTAGA...TGGACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCGTTGTGAAGTCATATTaGTCCGTGCAAAGATGCTGG +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVVVKSY*SVQRCW
Trigger: CCAGCATCTTTGCACGGACAAATATGACTTCACAAC...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATCTGCCTGAAGATTGTTaGCATAAGAAATACACCAAG +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYLPEDC*HKKYTK
Trigger: CTTGGTGTATTTCTTATGCAAACAATCTTCAGGCAG...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCTTCTTTCCAGATACCTaGCTTTCTGTACCTATAGGC +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVFFPDT*LSVPIG
Trigger: GCCTATAGGTACAGAAAGCAAGGTATCTGGAAAGAA...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGCTGAATGTGCAAAGGTaGCATCCTTTTGTGAATATC +
Preference number: 5 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLLNVQR*HPFVNI
Trigger: GATATTCACAAAAGGATGCAACCTTTGCACATTCAG...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCTCTAGAGGAATGTCATaGTCTGATCCAACAGCTGAA +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVSRGMS*SDPTAE
Trigger: TTCAGCTGTTGGATCAGACAATGACATTCCTCTAGA...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAAGAAAGAAATACCTGGCTAAAATGAAATCACTACAGAAGCATCGAGGACATTCTAGAGGAATGTCATaGTCTGATCCAACAGCTGAA +
Preference number: 5 (lower is better)
Translates to: TRKKYLAKMKSLQKHRGHSRGMS*SDPTAE
Trigger: TTCAGCTGTTGGATCAGACAATGACATTCCTCTAGA...ATGTCCTCGATGCTTCTGTAGTGATTTCATTTTAGCCAGGTATTTCTTTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAACATTTAATGAAGGGATaGGCTGGTACATATACCAAC +
Preference number: 5 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKHLMKG*AGTYTN
Trigger: GTTGGTATATGTACCAGCCAATCCCTTCATTAAATG...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp TACATCCTTGTAGCAAGCATTGAGGCTCGACTAACAGCACCTTTAACCAATTATGTCTGGCTATACATTTaGAGATGCATCCATCAAAAT +
Preference number: 5 (lower is better)
Translates to: YILVASIEARLTAPLTNYVWLYI*RCIHQN
Trigger: ATTTTGATGGATGCATCTCAAAATGTATAGCCAGAC...ATAATTGGTTAAAGGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGGATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AGCTCTCCCTTTCCTTTCAAGAGAACACATGAATGTACATTGTCTAGTTTCTCAAACAATTTATGGGTTTaGGAACAAATGGTCCAATGG +
Preference number: 5 (lower is better)
Translates to: SSPFPFKRTHECTLSSFSNNLWV*EQMVQW
Trigger: CCATTGGACCATTTGTTCCAAAACCCATAAATTGTT...TGAGAAACTAGACAATGTACATTCATGTGTTCTCTTGAAAGGAAAGGGAGAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ATAAATTTAGGCAACAATTTATGGGTTTTGGAACAAATGGTCCAATGGCCAGTCCATTTAATGAAGGGATaGGCTGGTACATATACCAAC +
Preference number: 5 (lower is better)
Translates to: INLGNNLWVLEQMVQWPVHLMKG*AGTYTN
Trigger: GTTGGTATATGTACCAGCCAATCCCTTCATTAAATG...GACTGGCCATTGGACCATTTGTTCCAAAACCCATAAATTGTTGCCTAAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp ACAGGAGGCTTAGAAAAGCAAATCCATACTGGTTCATCACACACAAGAAAGAAAGATGGAATATCTTTGTaGCATACGTACACTGTAGAA +
Preference number: 5 (lower is better)
Translates to: TGGLEKQIHTGSSHTRKKDGISL*HTYTVE
Trigger: TTCTACAGTGTACGTATGCAACAAAGATATTCCATC...TTTCTTTCTTGTGTGTGATGAACCAGTATGGATTTGCTTTTCTAAGCCTCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS-3UTR CAA 90 bp AATGGGTACATGTGTGGACAAAATGAATCTAAACCGCAAACAAAAGGACTACTGCATGATGGAATATCTTaGTTGCATACGTACACTGTA +
Preference number: 5 (lower is better)
Translates to: NGYMCGQNESKPQTKGLLHDGIS*LHTYTV
Trigger: TACAGTGTACGTATGCAACAAAGATATTCCATCATG...CAGTAGTCCTTTTGTTTGCGGTTTAGATTCATTTTGTCCACACATGTACCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395715.8
ENST00000640765.1
CDS TCA 90 bp CATCACTTCATCCAGAAAGACAATGCCACAGTGCACACATTTTGTTaGAAGTTCATCTTGAGTACTTCTATCAACTTTCTCTGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: HHFIQKDNATVHTFC*KFILSTSINFLCFY
Trigger: GTAAAAACAGAGAAAGTTGATAGAAGTACTCAAGATGAACTTTCAACAAAATGTGTGCACTGTGGCATTGTCTTTCTGGATGAAGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS TCA 90 bp AGAAAGACAATGCCACAGTGCACACATTTTGTTGAAAGTTCATCTTaGGTACTTCTATCAACTTTCTCTGTTTTTACTACATTCAAGGGA +
Preference number: 5 (lower is better)
Translates to: RKTMPQCTHFVESSS*VLLSTFSVFTTFKG
Trigger: TCCCTTGAATGTAGTAAAAACAGAGAAAGTTGATAGAAGTACTCAAGATGAACTTTCAACAAAATGTGTGCACTGTGGCATTGTCTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp GTGCCAGACACAGGCGTCAGCAGCCCCAGGCTTGCTTaGGTGTATGACGGACTCCCCCGCAGGATGTCTGCC +
Preference number: 6 (lower is better)
Translates to: VPDTGVSSPRLA*VYDGLPRRMSA
Trigger: GGCAGACATCCTGCGGGGGAGTCCGTCATACACCCAAGCAAGCCTGGGGCTGCTGACGCCTGTGTCTGGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp GCGCCAGATGGGCGGCCTCCACATTGGGACTATCCCTTAGAGTCTTaGTCTGCTCTTGGGTGCCAGACACAGGCGTCAGCAGCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: APDGRPPHWDYPLES*SALGCQTQASAAPG
Trigger: GCCTGGGGCTGCTGACGCCTGTGTCTGGCACCCAAGAGCAGACAAAGACTCTAAGGGATAGTCCCAATGTGGAGGCCGCCCATCTGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp CCGGCGGCTGAACTTGACCCTGCTGACTCCAGGGGCTACTGCAGTTaGAAGTCGCTGGTTTCCAAAGCTCAGATGCCTCAGACCCACCAA +
Preference number: 6 (lower is better)
Translates to: PAAELDPADSRGYCS*KSLVSKAQMPQTHQ
Trigger: TTGGTGGGTCTGAGGCATCTGAGCTTTGGAAACCAGCGACTTCAAACTGCAGTAGCCCCTGGAGTCAGCAGGGTCAAGTTCAGCCGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451156.1
CDS GCA 72 bp GGGGGTGCAGGCCATATCTTGAGGGTCATCTGCCTCTaGTCTTTGCGGAGACTTCAAGGGCTCACAGACTCC +
Preference number: 6 (lower is better)
Translates to: GGAGHILRVICL*SLRRLQGLTDS
Trigger: GGAGTCTGTGAGCCCTTGAAGTCTCCGCAAAGAGCAGAGGCAGATGACCCTCAAGATATGGCCTGCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp AATCGTCAAGAACACCCTCGGCAGCCCGAAAGATGGTaGCGCGGCGGCCAAAGCCATGAACCGTCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: NRQEHPRQPERW*RGGQSHEPSSV
Trigger: AACAGAAGACGGTTCATGGCTTTGGCCGCCGCGCCACCATCTTTCGGGCTGCCGAGGGTGTTCTTGACGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
CDS CAA 72 bp GGGCGGCCTCCACATTGGGACTATCCCTTAGAGTCTTaGTCTGCTCTTGGGTGCCAGACACAGGCGTCAGCA +
Preference number: 6 (lower is better)
Translates to: GRPPHWDYPLES*SALGCQTQASA
Trigger: TGCTGACGCCTGTGTCTGGCACCCAAGAGCAGACAAAGACTCTAAGGGATAGTCCCAATGTGGAGGCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp TGGGACTATCCCTTAGAGTCTTTGTCTGCTCTTGGGTaGCAGACACAGGCGTCAGCAGCCCCAGGCTTGCTT +
Preference number: 6 (lower is better)
Translates to: WDYPLESLSALG*QTQASAAPGLL
Trigger: AAGCAAGCCTGGGGCTGCTGACGCCTGTGTCTGGCACCCAAGAGCAGACAAAGACTCTAAGGGATAGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp ATTAATCGTCAAGAACACCCTCGGCAGCCCGAAAGATaGTGGCGCGGCGGCCAAAGCCATGAACCGTCTTCT +
Preference number: 6 (lower is better)
Translates to: INRQEHPRQPER*WRGGQSHEPSS
Trigger: AGAAGACGGTTCATGGCTTTGGCCGCCGCGCCACCATCTTTCGGGCTGCCGAGGGTGTTCTTGACGATTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
CDS CAA 72 bp CTCCCCCGCAGGATGTCTGCCCCTCTCCAAGTCACATaGCGAAGGTCATCACTGGAACTCTCGGTCCAAACT +
Preference number: 6 (lower is better)
Translates to: LPRRMSAPLQVT*RRSSLELSVQT
Trigger: AGTTTGGACCGAGAGTTCCAGTGATGACCTTCGCAATGTGACTTGGAGAGGGGCAGACATCCTGCGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp CGCCTCCGTAACAGGGACTGGGATTCATCCTTGGACTaGTTTTCTCCCGATGCAGGATACTGCTGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: RLRNRDWDSSLD*FSPDAGYCWGR
Trigger: CCTCCCCCAGCAGTATCCTGCATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGTCCCTGTTACGGAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp TCCCCCGCAGGATGTCTGCCCCTCTCCAAGTCACATTaGGAAGGTCATCACTGGAACTCTCGGTCCAAACTT +
Preference number: 6 (lower is better)
Translates to: SPAGCLPLSKSH*EGHHWNSRSKL
Trigger: AAGTTTGGACCGAGAGTTCCAGTGATGACCTTCGCAATGTGACTTGGAGAGGGGCAGACATCCTGCGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp GCCCCTCTGCTGTTTGTTGAGCTGCTCAGCCTGAAGTaGCTCTGGGTTAAGGCGCTTTCTTGTTCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: APLLFVELLSLK*LWVKALSCSPP
Trigger: AGGAGGAGAACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAACAAACAGCAGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp TGGTGGTGCCTTCGTTTTCTCCTTGGAGGCACCGTTTaGAGTTGGCCCAGGTCTGGAATGCTTGATCGCCAA +
Preference number: 6 (lower is better)
Translates to: WWCLRFLLGGTV*SWPRSGMLDRQ
Trigger: TTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAACGGTGCCTCCAAGGAGAAAACGAAGGCACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp GCGGCTGAACTTGACCCTGCTGACTCCAGGGGCTACTaGAGTTTGAAGTCGCTGGTTTCCAAAGCTCAGATG +
Preference number: 6 (lower is better)
Translates to: AAELDPADSRGY*SLKSLVSKAQM
Trigger: CATCTGAGCTTTGGAAACCAGCGACTTCAAACTGCAGTAGCCCCTGGAGTCAGCAGGGTCAAGTTCAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451156.1
CDS CAA 72 bp CTCCTCTCTAACGGGCTTCCATTGACTTGCTCCTCATaGCTGCCCCTCTGCTGTTTGTTGAGCTGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: LLSNGLPLTCSS*LPLCCLLSCSA
Trigger: GGCTGAGCAGCTCAACAAACAGCAGAGGGGCAGCAATGAGGAGCAAGTCAATGGAAGCCCGTTAGAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp TTGCTGCCCCTCTGCTGTTTGTTGAGCTGCTCAGCCTaGAGTGCCTCTGGGTTAAGGCGCTTTCTTGTTCTC +
Preference number: 6 (lower is better)
Translates to: LLPLCCLLSCSA*SASGLRRFLVL
Trigger: GAGAACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAACAAACAGCAGAGGGGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp CTCTACGCCTCCGTAACAGGGACTGGGATTCATCCTTaGACTTGTTTTCTCCCGATGCAGGATACTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LYASVTGTGIHP*TCFLPMQDTAG
Trigger: CCCAGCAGTATCCTGCATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGTCCCTGTTACGGAGGCGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp CCTCTACGCCTCCGTAACAGGGACTGGGATTCATCCTaGGACTTGTTTTCTCCCGATGCAGGATACTGCTGG +
Preference number: 6 (lower is better)
Translates to: PLRLRNRDWDSS*DLFSPDAGYCW
Trigger: CCAGCAGTATCCTGCATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGTCCCTGTTACGGAGGCGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp GAACTTGACCCTGCTGACTCCAGGGGCTACTGCAGTTaGAAGTCGCTGGTTTCCAAAGCTCAGATGCCTCAG +
Preference number: 6 (lower is better)
Translates to: ELDPADSRGYCS*KSLVSKAQMPQ
Trigger: CTGAGGCATCTGAGCTTTGGAAACCAGCGACTTCAAACTGCAGTAGCCCCTGGAGTCAGCAGGGTCAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451156.1
CDS CAA 90 bp TATGACGGACTCCCCCGCAGGATGTCTGCCCCTCTCCAAGTCACATaGCGAAGGTCATCACTGGAACTCTCGGTCCAAACTTTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: YDGLPRRMSAPLQVT*RRSSLELSVQTFSL
Trigger: CAAAGAGAAAGTTTGGACCGAGAGTTCCAGTGATGACCTTCGCAATGTGACTTGGAGAGGGGCAGACATCCTGCGGGGGAGTCCGTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp AACTTGACCCTGCTGACTCCAGGGGCTACTGCAGTTTaGAGTCGCTGGTTTCCAAAGCTCAGATGCCTCAGA +
Preference number: 6 (lower is better)
Translates to: NLTLLTPGATAV*SRWFPKLRCLR
Trigger: TCTGAGGCATCTGAGCTTTGGAAACCAGCGACTTCAAACTGCAGTAGCCCCTGGAGTCAGCAGGGTCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451156.1
CDS GCA 72 bp TCTTCTGACCTCCTCTCTAACGGGCTTCCATTGACTTaGTCCTCATTGCTGCCCCTCTGCTGTTTGTTGAGC +
Preference number: 6 (lower is better)
Translates to: SSDLLSNGLPLT*SSLLPLCCLLS
Trigger: GCTCAACAAACAGCAGAGGGGCAGCAATGAGGAGCAAGTCAATGGAAGCCCGTTAGAGAGGAGGTCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp GATACCTTGCTTTCTGTACCTATAGGCTCCAGGATCTaGCCCTCGCCTTCACTTGCAACGTTTCTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: DTLLSVPIGSRI*PSPSLATFLRG
Trigger: CCCTCTGAGAAACGTTGCAAGTGAAGGCGAGGGCCAGATCCTGGAGCCTATAGGTACAGAAAGCAAGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220888.9
ENST00000395713.6
ENST00000395715.8
ENST00000422939.1
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000519815.5
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp TCCTTGACAGACTGCTGCCCATCCGATCCTTGCAGGTaGTTTGCTTCTTGTTTGACATCCGATGCTTGGGAC +
Preference number: 6 (lower is better)
Translates to: SLTDCCPSDPCR*FASCLTSDAWD
Trigger: GTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAGCAGTCTGTCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp TCAATTTTGGGCTCCTCTTTGATGGTGGATATGGCATaGCCGTCCTCTTCGCCGTTGGCTGTAGTGATGTCC +
Preference number: 6 (lower is better)
Translates to: SILGSSLMVDMA*PSSSPLAVVMS
Trigger: GGACATCACTACAGCCAACGGCGAAGAGGACGGTCATGCCATATCCACCATCAAAGAGGAGCCCAAAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp GATGATCTTCTGACCTCCTCTCTAACGGGCTTCCATTaGCTTGCTCCTCATTGCTGCCCCTCTGCTGTTTGT +
Preference number: 6 (lower is better)
Translates to: DDLLTSSLTGFH*LAPHCCPSAVC
Trigger: ACAAACAGCAGAGGGGCAGCAATGAGGAGCAAGTCAATGGAAGCCCGTTAGAGAGGAGGTCAGAAGATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp GACAGACTGCTGCCCATCCGATCCTTGCAGGTGATTTaGTTCTTGTTTGACATCCGATGCTTGGGACTCATG +
Preference number: 6 (lower is better)
Translates to: DRLLPIRSLQVI*FLFDIRCLGLM
Trigger: CATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAGCAGTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp GTAGAGGCCACACGCGTTGCATACATATCCGCCATTTaGATTCTTTCGCCAGAGAGAGGTCTTTGTGGTCAG +
Preference number: 6 (lower is better)
Translates to: VEATRVAYISAI*ILSPERGLCGQ
Trigger: CTGACCACAAAGACCTCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTATGCAACGCGTGTGGCCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp TTGAGGCCACTGAAACTGGGCTCAAACCTTGACAATTaGCTTGACCACTCTGTGCTTGCCCTGTTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LRPLKLGSNLDN*LDHSVLALFPL
Trigger: CAGAGGAAACAGGGCAAGCACAGAGTGGTCAAGCCAATTGTCAAGGTTTGAGCCCAGTTTCAGTGGCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp GGGCCAAGATTTTGCTGTCCAGCTCAGCATCTTGCCTaGTGCGGTTATGCAGTCCTAAGTGATACTTTCGGA +
Preference number: 6 (lower is better)
Translates to: GPRFCCPAQHLA*CGYAVLSDTFG
Trigger: TCCGAAAGTATCACTTAGGACTGCATAACCGCACCAGGCAAGATGCTGAGCTGGACAGCAAAATCTTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp CTGCTGCCCATCCGATCCTTGCAGGTGATTTGCTTCTaGTTTGACATCCGATGCTTGGGACTCATGCACACT +
Preference number: 6 (lower is better)
Translates to: LLPIRSLQVICF*FDIRCLGLMHT
Trigger: AGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp GGTAGAGGCCACACGCGTTGCATACATATCCGCCATTaGCATTCTTTCGCCAGAGAGAGGTCTTTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: GRGHTRCIHIRH*HSFARERSLWS
Trigger: TGACCACAAAGACCTCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTATGCAACGCGTGTGGCCTCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp TTCTCCTTGGAGGCACCGTTTGCAGTTGGCCCAGGTCTGGAATGCTaGATCGCCAAATCTAGAGGAATGTCATTGTCTGATCCAACAGCT +
Preference number: 6 (lower is better)
Translates to: FSLEAPFAVGPGLEC*IAKSRGMSLSDPTA
Trigger: AGCTGTTGGATCAGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAACGGTGCCTCCAAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp GTGAAAGAGGAGTACATCTACGTCAGGGGTGGTGAATaGACACTGATGGCACTGATGTTTGACTCGCGAGCT +
Preference number: 6 (lower is better)
Translates to: VKEEYIYVRGGE*TLMALMFDSRA
Trigger: AGCTCGCGAGTCAAACATCAGTGCCATCAGTGTTCATTCACCACCCCTGACGTAGATGTACTCCTCTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp GGTCATCACTGGAACTCTCGGTCCAAACTTTCTCTTTaGGCCCGTCCTTCTCTTCCAGCTTCTCTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: GHHWNSRSKLSL*ARPSLPASLSS
Trigger: TGAAGAGAGAGAAGCTGGAAGAGAAGGACGGGCTCAAAGAGAAAGTTTGGACCGAGAGTTCCAGTGATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp AGGCACCGTTTGCAGTTGGCCCAGGTCTGGAATGCTTaGTCGCCAAATCTAGAGGAATGTCATTGTCTGATC +
Preference number: 6 (lower is better)
Translates to: RHRLQLAQVWNA*SPNLEECHCLI
Trigger: GATCAGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAACGGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp TTGGAGGCACCGTTTGCAGTTGGCCCAGGTCTGGAATaGTTGATCGCCAAATCTAGAGGAATGTCATTGTCT +
Preference number: 6 (lower is better)
Translates to: LEAPFAVGPGLE*LIAKSRGMSLS
Trigger: AGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAACGGTGCCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp GTGCAAAGGTTGCATCCTTTTGTGAATATCCAGAGTTaGGCTGACCAGGACTGGCTGCTGAGCAGAATGGCT +
Preference number: 6 (lower is better)
Translates to: VQRLHPFVNIQS*ADQDWLLSRMA
Trigger: AGCCATTCTGCTCAGCAGCCAGTCCTGGTCAGCCAAACTCTGGATATTCACAAAAGGATGCAACCTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp GAGGCACCGTTTGCAGTTGGCCCAGGTCTGGAATGCTaGATCGCCAAATCTAGAGGAATGTCATTGTCTGAT +
Preference number: 6 (lower is better)
Translates to: EAPFAVGPGLEC*IAKSRGMSLSD
Trigger: ATCAGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAACGGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp TGCAGGCCCCTCTGGATATGTGTTGTGAAGTCATATTaGTCCGTGCAAAGATGCTGGCATATGCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: CRPLWICVVKSY*SVQRCWHMLHW
Trigger: CCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp CTTGACAGACTGCTGCCCATCCGATCCTTGCAGGTGATTTGCTTCTaGTTTGACATCCGATGCTTGGGACTCATGCACACTTTCATAGTG +
Preference number: 6 (lower is better)
Translates to: LDRLLPIRSLQVICF*FDIRCLGLMHTFIV
Trigger: CACTATGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAGCAGTCTGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp TCAGCATCTTGCCTGGTGCGGTTATGCAGTCCTAAGTaGTACTTTCGGAAGTGCTTAATCAGATCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: SASCLVRLCSPK*YFRKCLIRSVG
Trigger: CCCCACAGATCTGATTAAGCACTTCCGAAAGTATCACTTAGGACTGCATAACCGCACCAGGCAAGATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp TCCCTTGGCAATCTGGTGTTTTCCGTCCAATGCCAATaGATGTTCCACCTGAAGTCACCTGCACATCATAGG +
Preference number: 6 (lower is better)
Translates to: SLGNLVFSVQCQ*MFHLKSPAHHR
Trigger: CCTATGATGTGCAGGTGACTTCAGGTGGAACATTCATTGGCATTGGACGGAAAACACCAGATTGCCAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp GCACTGAGTACCCAACAGGAGTGTCATCTCCTGCTTTaGCTGTTATCTTGTCCTGCCATTTTCCCAAGTCTC +
Preference number: 6 (lower is better)
Translates to: ALSTQQECHLLL*LLSCPAIFPSL
Trigger: GAGACTTGGGAAAATGGCAGGACAAGATAACAGTCAAAGCAGGAGATGACACTCCTGTTGGGTACTCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp GCCCATCCGATCCTTGCAGGTGATTTGCTTCTTGTTTaGCATCCGATGCTTGGGACTCATGCACACTTTCAT +
Preference number: 6 (lower is better)
Translates to: AHPILAGDLLLV*HPMLGTHAHFH
Trigger: ATGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp CCAAGATTTTGCTGTCCAGCTCAGCATCTTGCCTGGTaGGGTTATGCAGTCCTAAGTGATACTTTCGGAAGT +
Preference number: 6 (lower is better)
Translates to: PRFCCPAQHLAW*GYAVLSDTFGS
Trigger: ACTTCCGAAAGTATCACTTAGGACTGCATAACCGCACCAGGCAAGATGCTGAGCTGGACAGCAAAATCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp TCCAGCCGCCCCAGGAGACAAGTGCAGAAGCAAGAGTaGACAGTGGGAACAATTACTTTTTCTACAAGCAAA +
Preference number: 6 (lower is better)
Translates to: SSRPRRQVQKQE*TVGTITFSTSK
Trigger: TTTGCTTGTAGAAAAAGTAATTGTTCCCACTGTGCACTCTTGCTTCTGCACTTGTCTCCTGGGGCGGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp AGTCATATTTGTCCGTGCAAAGATGCTGGCATATGCTaGACTGGAAAGGTCCACTGTCACCATGGCAACTCA +
Preference number: 6 (lower is better)
Translates to: SHICPCKDAGIC*TGKVHCHHGNS
Trigger: TGAGTTGCCATGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp CTGCTGTTTGTTGAGCTGCTCAGCCTGAAGTGCCTCTaGGTTAAGGCGCTTTCTTGTTCTCCTCCTAATAAT +
Preference number: 6 (lower is better)
Translates to: LLFVELLSLKCL*VKALSCSPPNN
Trigger: ATTATTAGGAGGAGAACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAACAAACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp ATTCAAAAACCCGTAACAGGGACTGGGATTCATCCTTaGACTTGTTTTCTCCCGATGCAGGATACTGCTGGG +
Preference number: 6 (lower is better)
Translates to: IQKPVTGTGIHP*TCFLPMQDTAG
Trigger: CCCAGCAGTATCCTGCATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGTCCCTGTTACGGGTTTTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519674.1
CDS CAA 72 bp TTTGCTTTCCTTGACAGACTGCTGCCCATCCGATCCTaGCAGGTGATTTGCTTCTTGTTTGACATCCGATGC +
Preference number: 6 (lower is better)
Translates to: FAFLDRLLPIRS*QVICFLFDIRC
Trigger: GCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGATGGGCAGCAGTCTGTCAAGGAAAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp GGCTTTATGGGCACTGAGTACCCAACAGGAGTGTCATCTCCTGCTTaGACTGTTATCTTGTCCTGCCATTTTCCCAAGTCTCCAGAATCA +
Preference number: 6 (lower is better)
Translates to: GFMGTEYPTGVSSPA*TVILSCHFPKSPES
Trigger: TGATTCTGGAGACTTGGGAAAATGGCAGGACAAGATAACAGTCAAAGCAGGAGATGACACTCCTGTTGGGTACTCAGTGCCCATAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp TTGTTCCTATGCAGGCCCCTCTGGATATGTGTTGTGAAGTCATATTaGTCCGTGCAAAGATGCTGGCATATGCTGCACTGGAAAGGTCCA +
Preference number: 6 (lower is better)
Translates to: LFLCRPLWICVVKSY*SVQRCWHMLHWKGP
Trigger: TGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCATAGGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp TGGAAGTCTTTGGAATGGCTGAACTGCACCATGTTATaGAGGGCCAAGATTTTGCTGTCCAGCTCAGCATCT +
Preference number: 6 (lower is better)
Translates to: WKSLEWLNCTML*RAKILLSSSAS
Trigger: AGATGCTGAGCTGGACAGCAAAATCTTGGCCCTTCATAACATGGTGCAGTTCAGCCATTCCAAAGACTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp GCCTCTCTCAGAACTTCCTTTCCCTTCAGATACGGATaGACTATTTCCTGGATCTCCAGTACTTTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: ASLRTSFPFRYG*TISWISSTFLR
Trigger: CCTCAGGAAAGTACTGGAGATCCAGGAAATAGTTCATCCGTATCTGAAGGGAAAGGAAGTTCTGAGAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp CCGGGTCTGGGTTGTCATTCACCAGTAAGTCAGTTTTaGATTTATTCAGTCTTACACCCCCATCTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: PGLGCHSPVSQF*IYSVLHPHLKA
Trigger: TGCCTTCAGATGGGGGTGTAAGACTGAATAAATCCAAAACTGACTTACTGGTGAATGACAACCCAGACCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp TGTGTTGTGAAGTCATATTTGTCCGTGCAAAGATGCTaGCATATGCTGCACTGGAAAGGTCCACTGTCACCA +
Preference number: 6 (lower is better)
Translates to: CVVKSYLSVQRC*HMLHWKGPLSP
Trigger: TGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp GTCATCCAAGCAGATTCAAAAACCCGTAACAGGGACTaGGATTCATCCTTGGACTTGTTTTCTCCCGATGCA +
Preference number: 6 (lower is better)
Translates to: VIQADSKTRNRD*DSSLDLFSPDA
Trigger: TGCATCGGGAGAAAACAAGTCCAAGGATGAATCCCAGTCCCTGTTACGGGTTTTTGAATCTGCTTGGATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519674.1
CDS TCA 72 bp TGGGTACTGGTACTTTTCAATAGGGCTGCCTGGTGGTaGATAATTTGGGTGTTTCGCAGGTCTCATGTACTT +
Preference number: 6 (lower is better)
Translates to: WVLVLFNRAAWW*IIWVFRRSHVL
Trigger: AAGTACATGAGACCTGCGAAACACCCAAATTATTCACCACCAGGCAGCCCTATTGAAAAGTACCAGTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp CATTGTTCCTATGCAGGCCCCTCTGGATATGTGTTGTaGAGTCATATTTGTCCGTGCAAAGATGCTGGCATA +
Preference number: 6 (lower is better)
Translates to: HCSYAGPSGYVL*SHICPCKDAGI
Trigger: TATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCATAGGAACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp GAAGACGTGGTTGCCAAGGTTAATAAGACAGAATCTTaGATCCCAGTTGATGAGGCTGGACCACTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: EDVVAKVNKTES*IPVDEAGPLGE
Trigger: TTCTCCAAGTGGTCCAGCCTCATCAACTGGGATTCAAGATTCTGTCTTATTAACCTTGGCAACCACGTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422939.1
CDS CCA 72 bp GTGGCCCCACTACAATTACATCAGGGCCATGGCTTTTaGAATATCGGAAGTCACAGAACTGACAATTATAGC +
Preference number: 6 (lower is better)
Translates to: VAPLQLHQGHGF*NIGSHRTDNYS
Trigger: GCTATAATTGTCAGTTCTGTGACTTCCGATATTCCAAAAGCCATGGCCCTGATGTAATTGTAGTGGGGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp CTGGAAGTCATTATGTACAAAGGGAAGTCCAAAAAGTaGGTACTGGTACTTTTCAATAGGGCTGCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: LEVIMYKGKSKK*VLVLFNRAAWW
Trigger: CCACCAGGCAGCCCTATTGAAAAGTACCAGTACCCACTTTTTGGACTTCCCTTTGTACATAATGACTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp ATCCGATCCTTGCAGGTGATTTGCTTCTTGTTTGACATCCGATGCTaGGGACTCATGCACACTTTCATAGTGAAAGAGGAGTACATCTAC +
Preference number: 6 (lower is better)
Translates to: IRSLQVICFLFDIRC*GLMHTFIVKEEYIY
Trigger: GTAGATGTACTCCTCTTTCACTATGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp TATCTGAATGTGCAAAGGTTGCATCCTTTTGTGAATATCCAGAGTTaGGCTGACCAGGACTGGCTGCTGAGCAGAATGGCTTTTAGTCAA +
Preference number: 6 (lower is better)
Translates to: YLNVQRLHPFVNIQS*ADQDWLLSRMAFSQ
Trigger: TTGACTAAAAGCCATTCTGCTCAGCAGCCAGTCCTGGTCAGCCAAACTCTGGATATTCACAAAAGGATGCAACCTTTGCACATTCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp GTCTTAGAAGACGCTCAGAAGACACAGAAGACATTTTaGGAGCTGATCTGTACATATGGAAGACGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: VLEDAQKTQKTF*ELICTYGRRGC
Trigger: GCAACCACGTCTTCCATATGTACAGATCAGCTCTCAAAATGTCTTCTGTGTCTTCTGAGCGTCTTCTAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422939.1
CDS TCA 72 bp GTCTTAGAAGACGCTCAGAAGACACAGAAGACATTTTaGGAGCTGATCTGTACATTACTCTGCATGCTGGTG +
Preference number: 6 (lower is better)
Translates to: VLEDAQKTQKTF*ELICTLLCMLV
Trigger: CACCAGCATGCAGAGTAATGTACAGATCAGCTCTCAAAATGTCTTCTGTGTCTTCTGAGCGTCTTCTAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451156.1
CDS GCA 72 bp TCCTTGCAGGTGATTTGCTTCTTGTTTGACATCCGATaGTTGGGACTCATGCACACTTTCATAGTGAAAGAG +
Preference number: 6 (lower is better)
Translates to: SLQVICFLFDIR*LGLMHTFIVKE
Trigger: CTCTTTCACTATGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp ATATGTGTTGTGAAGTCATATTTGTCCGTGCAAAGATaGTGGCATATGCTGCACTGGAAAGGTCCACTGTCA +
Preference number: 6 (lower is better)
Translates to: ICVVKSYLSVQR*WHMLHWKGPLS
Trigger: TGACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp TTTTCCACTTGTGCATTGTTCCTATGCAGGCCCCTCTaGATATGTGTTGTGAAGTCATATTTGTCCGTGCAA +
Preference number: 6 (lower is better)
Translates to: FSTCALFLCRPL*ICVVKSYLSVQ
Trigger: TTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCATAGGAACAATGCACAAGTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp TTGCAGGTGATTTGCTTCTTGTTTGACATCCGATGCTaGGGACTCATGCACACTTTCATAGTGAAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: LQVICFLFDIRC*GLMHTFIVKEE
Trigger: CTCCTCTTTCACTATGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp ATCTCCAGTACTTTCCTGAGGACTTTTTATCTGAATGTGCAAAGGTaGCATCCTTTTGTGAATATCCAGAGTTTGGCTGACCAGGACTGG +
Preference number: 6 (lower is better)
Translates to: ISSTFLRTFYLNVQR*HPFVNIQSLADQDW
Trigger: CCAGTCCTGGTCAGCCAAACTCTGGATATTCACAAAAGGATGCAACCTTTGCACATTCAGATAAAAAGTCCTCAGGAAAGTACTGGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp ATCCGATCCTTGCAGGTGATTTGCTTCTTGTTTGACATCCGATGCTaGGGACTCATGCACACTTTCATAGTGAAAGAGGAGTACATCATT +
Preference number: 6 (lower is better)
Translates to: IRSLQVICFLFDIRC*GLMHTFIVKEEYII
Trigger: AATGATGTACTCCTCTTTCACTATGAAAGTGTGCATGAGTCCCAAGCATCGGATGTCAAACAAGAAGCAAATCACCTGCAAGGATCGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517323.2
ENST00000519076.5
CDS CCA 72 bp TTGCAGAATTTACAGCGGAAATACTTGGTGTTCCCTTaGCAATCTGGTGTTTTCCGTCCAATGCCAATGAAT +
Preference number: 6 (lower is better)
Translates to: LQNLQRKYLVFP*QSGVFRPMPMN
Trigger: ATTCATTGGCATTGGACGGAAAACACCAGATTGCCAAGGGAACACCAAGTATTTCCGCTGTAAATTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp ATTGCAGAATTTACAGCGGAAATACTTGGTGTTCCCTaGGCAATCTGGTGTTTTCCGTCCAATGCCAATGAA +
Preference number: 6 (lower is better)
Translates to: IAEFTAEILGVP*AIWCFPSNANE
Trigger: TTCATTGGCATTGGACGGAAAACACCAGATTGCCAAGGGAACACCAAGTATTTCCGCTGTAAATTCTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp TGTCTTAGAAGACGCTCAGAAGACACAGAAGACATTTaGAGAGCTGATCTGTACATATGGAAGACGTGGTTG +
Preference number: 6 (lower is better)
Translates to: CLRRRSEDTEDI*RADLYIWKTWL
Trigger: CAACCACGTCTTCCATATGTACAGATCAGCTCTCAAAATGTCTTCTGTGTCTTCTGAGCGTCTTCTAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422939.1
CDS CAA 72 bp TGTCTTAGAAGACGCTCAGAAGACACAGAAGACATTTaGAGAGCTGATCTGTACATTACTCTGCATGCTGGT +
Preference number: 6 (lower is better)
Translates to: CLRRRSEDTEDI*RADLYITLHAG
Trigger: ACCAGCATGCAGAGTAATGTACAGATCAGCTCTCAAAATGTCTTCTGTGTCTTCTGAGCGTCTTCTAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451156.1
CDS CAA 90 bp ATAAGTGAAATTGCAGAATTTACAGCGGAAATACTTGGTGTTCCCTaGGCAATCTGGTGTTTTCCGTCCAATGCCAATGAATGTTCCACC +
Preference number: 6 (lower is better)
Translates to: ISEIAEFTAEILGVP*AIWCFPSNANECST
Trigger: GGTGGAACATTCATTGGCATTGGACGGAAAACACCAGATTGCCAAGGGAACACCAAGTATTTCCGCTGTAAATTCTGCAATTTCACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS CCA 72 bp TATTTACTCCAGAACCGCAGCCAATCAGCTTCACTCTaGAAGTCATTATGTACAAAGGGAAGTCCAAAAAGT +
Preference number: 6 (lower is better)
Translates to: YLLQNRSQSASL*KSLCTKGSPKS
Trigger: ACTTTTTGGACTTCCCTTTGTACATAATGACTTCCAGAGTGAAGCTGATTGGCTGCGGTTCTGGAGTAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS GCA 72 bp GGGTTAAGGCGCTTTCTTGTTCTCCTCCTAATAATCTaGTCACCGTTGTTTTGTTTAATGATGTTTAAAGGC +
Preference number: 6 (lower is better)
Translates to: GLRRFLVLLLII*SPLFCLMMFKG
Trigger: GCCTTTAAACATCATTAAACAAAACAACGGTGAGCAGATTATTAGGAGGAGAACAAGAAAGCGCCTTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000518018.1
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp GTTGTTCTAATTCGGTGGATGAGTTGCCCATATAAGTaGAATTGCAGAATTTACAGCGGAAATACTTGGTGT +
Preference number: 6 (lower is better)
Translates to: VVLIRWMSCPYK*NCRIYSGNTWC
Trigger: ACACCAAGTATTTCCGCTGTAAATTCTGCAATTTCACTTATATGGGCAACTCATCCACCGAATTAGAACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000517323.2
ENST00000519076.5
ENST00000519674.1
ENST00000520276.5
ENST00000640765.1
CDS TCA 72 bp ATCCAGAAAGACAATGCCACAGTGCACACATTTTGTTaGAAGTTCATCTTGAGTACTTCTATCAACTTTCTC +
Preference number: 6 (lower is better)
Translates to: IQKDNATVHTFC*KFILSTSINFL
Trigger: GAGAAAGTTGATAGAAGTACTCAAGATGAACTTTCAACAAAATGTGTGCACTGTGGCATTGTCTTTCTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 90 bp CATACATCACTTCATCCAGAAAGACAATGCCACAGTGCACACATTTaGTTGAAAGTTCATCTTGAGTACTTCTATCAACTTTCTCTGTTT +
Preference number: 6 (lower is better)
Translates to: HTSLHPERQCHSAHI*LKVHLEYFYQLSLF
Trigger: AAACAGAGAAAGTTGATAGAAGTACTCAAGATGAACTTTCAACAAAATGTGTGCACTGTGGCATTGTCTTTCTGGATGAAGTGATGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220888.9
ENST00000395715.8
ENST00000519076.5
ENST00000520276.5
ENST00000640765.1
CDS CAA 72 bp TGTCTTAGAAGACGCTCAGAAGACACAGAAGACATTTaGAGAGCTGATCTGTACATCTTTGTTCAAATAATA +
Preference number: 6 (lower is better)
Translates to: CLRRRSEDTEDI*RADLYIFVQII
Trigger: TATTATTTGAACAAAGATGTACAGATCAGCTCTCAAAATGTCTTCTGTGTCTTCTGAGCGTCTTCTAAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395713.6