RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPM7 (Homo sapiens)

Ensembl gene IDs: ENSG00000092439

Ensembl transcript IDs: ENST00000558444.5, ENST00000560284.1, ENST00000560516.1, ENST00000560638.1, ENST00000560849.2, ENST00000560955.5, ENST00000561267.5, ENST00000561443.5, ENST00000645282.1, ENST00000646667.1

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAATAAAACAGCTGCCAATAAAATCTGCATGGACACCTACCTTTaGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCTCATC +
Preference number: 1 (lower is better)
Translates to: GNKTAANKICMDTYL*LMVLYHIRESITLI
Trigger: GATGAGGGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCATGCAGATTTTATTGGCAGCTGTTTTATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR GCA 90 bp AAGAATATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTaGATACACCTTTCTATATTACCAAACAATTTCCTCCCGAGGGAA +
Preference number: 1 (lower is better)
Translates to: KNIDLLTVLESANST*IHLSILPNNFLPRE
Trigger: TTCCCTCGGGAGGAAATTGTTTGGTAATATAGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAATATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR CAA 90 bp TTTTCTTACAGTATGCCCATCACAAACCAGGCAGCAAGCAAGGTATaGGGTGCTACTCAATCCAGTGAAGTCTTGAGGGTCCCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: FSYSMPITNQAASKV*GATQSSEVLRVPSL
Trigger: GAGGGAAGGGACCCTCAAGACTTCACTGGATTGAGTAGCACCCAATACCTTGCTTGCTGCCTGGTTTGTGATGGGCATACTGTAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
3UTR-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCTCCCGAGGGAAAAGTaGCACAGTAACATTTCTGTG +
Preference number: 2 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLPREK*HSNISV
Trigger: CACAGAAATGTTACTGTGTCACTTTTCCCTCGGGAG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACTCCCGAGGGAAAAGTaGCACAGTAACATTTCTGTG +
Preference number: 2 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLPREK*HSNISV
Trigger: CACAGAAATGTTACTGTGTCACTTTTCCCTCGGGAG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGCTGCCAATAAAATCTaGATGGACACCTACCTTTGG +
Preference number: 2 (lower is better)
Translates to: SHFPSRGQQASSWEPVISAANKI*MDTYLW
Trigger: CCAAAGGTAGGTGTCCATGCAGATTTTATTGGCAGC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR CCA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGTCCCAGCTCCTCGGGTaGCTGAGGCAGGAGAATCGC +
Preference number: 2 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRSQLLG*LRQENR
Trigger: GCGATTCTCCTGCCTCAGCCACCCGAGGAGCTGGGA...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
3UTR-3UTR TCA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAGCTCCTCGGGTGGCTaGGGCAGGAGAATCGCTGAA +
Preference number: 2 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRSSSGG*GRRIAE
Trigger: TTCAGCGATTCTCCTGCCTCAGCCACCCGAGGAGCT...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
3UTR-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACCTATAGGGACTTTCTaGCTGATTAATCAGGTCAAA +
Preference number: 2 (lower is better)
Translates to: SHFPSRGQQASSWEPVISPIGTF*LINQVK
Trigger: TTTGACCTGATTAATCAGTCAGAAAGTCCCTATAGG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACTTCATTTCCCTAGTTaGATGGCAATAAAACAGCTG +
Preference number: 2 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLHFPS*MAIKQL
Trigger: CAGCTGTTTTATTGCCATTCAACTAGGGAAATGAAG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATTAAAATTTCTCAGCTaGCAGCTCTATCCTATAGGG +
Preference number: 2 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLKFLS*QLYPIG
Trigger: CCCTATAGGATAGAGCTGGCAGCTGAGAAATTTTAA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAATGGACACCTACCTTTaGTTAATGGTATTGTACCAC +
Preference number: 2 (lower is better)
Translates to: SHFPSRGQQASSWEPVISMDTYL*LMVLYH
Trigger: GTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGATGGACACCTACCTTTaGTTAATGGTATTGTACCAC +
Preference number: 2 (lower is better)
Translates to: LEQVISLPVANKHLVGNQMDTYL*LMVLYH
Trigger: GTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAGGTCAAAAGAATATTaGCCTTTTAACTGTGCTGGA +
Preference number: 2 (lower is better)
Translates to: LEQVISLPVANKHLVGNQRSKEY*PFNCAG
Trigger: TCCAGCACAGTTAAAAGGTCAATATTCTTTTGACCT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCCTATAGGGACTTTCTaGCTGATTAATCAGGTCAAA +
Preference number: 2 (lower is better)
Translates to: MDTYLWLMVLYHIRESITPIGTF*LINQVK
Trigger: TTTGACCTGATTAATCAGTCAGAAAGTCCCTATAGG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR TCA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAAGGAATGGCAGATGTaGAGTATGAGGCAAACAAAC +
Preference number: 2 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRKEWQM*SMRQTN
Trigger: GTTTGTTTGCCTCATACTTCACATCTGCCATTCCTT...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
3UTR GCA 72 bp ATACAGCACATAATTCACAGCACAGATGAGGCTGGGTaGAGCAATTCATGCCTGCAATTCTACCACTTTGGG +
Preference number: 3 (lower is better)
Translates to: IQHIIHSTDEAG*SNSCLQFYHFG
Trigger: CCCAAAGTGGTAGAATTGCAGGCATGAATTGCTGCACCCAGCCTCATCTGTGCTGTGAATTATGTGCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
3UTR-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACATGGACACCTACCTTaGGTTAATGGTATTGTACCA +
Preference number: 3 (lower is better)
Translates to: SHFPSRGQQASSWEPVISHGHLP*VNGIVP
Trigger: TGGTACAATACCATTAACCAAAGGTAGGTGTCCATG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCTTTGGTTAATGGTATaGTACCACATAAGAGAGAGC +
Preference number: 3 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLWLMV*YHIRES
Trigger: GCTCTCTCTTATGTGGTACAATACCATTAACCAAAG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR TCA 72 bp TGGAGCCTAACCCTGATTCATAAATACCGTCCCTCTTaGAAATGGTCTTCAGTTCAGGCTTCTCATACCTCT +
Preference number: 3 (lower is better)
Translates to: WSLTLIHKYRPS*KWSSVQASHTS
Trigger: AGAGGTATGAGAAGCCTGAACTGAAGACCATTTTCAAGAGGGACGGTATTTATGAATCAGGGTTAGGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR CCA 72 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTaGGAACCAGTGATATCATCACTGAACACACTAAAT +
Preference number: 3 (lower is better)
Translates to: SHFPSRGQQASS*EPVISSLNTLN
Trigger: ATTTAGTGTGTTCAGTGATGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR GCA 72 bp AATATATATATAAAATTAGGTACGTGTGGTGGTGCATaGCTGTGGTTCCACCTAATCAAGAGGCAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: NIYIKLGTCGGA*LWFHLIKRQWQ
Trigger: CTGCCACTGCCTCTTGATTAGGTGGAACCACAGGCATGCACCACCACACGTACCTAATTTTATATATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
3UTR TCA 72 bp TCTATATTACCAAACAATTTCCTCCCGAGGGAAAAGTaGCACAGTAACATTTCTGTGAGGTGCAGGCAAAAC +
Preference number: 3 (lower is better)
Translates to: SILPNNFLPREK*HSNISVRCRQN
Trigger: GTTTTGCCTGCACCTCACAGAAATGTTACTGTGTCACTTTTCCCTCGGGAGGAAATTGTTTGGTAATATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR GCA 72 bp AACAGGAAATGGTACAGAAACCACCAATGGTCATCATaGTTGAGAGTCAATACAGCACATAATTCACAGCAC +
Preference number: 3 (lower is better)
Translates to: NRKWYRNHQWSS*LRVNTAHNSQH
Trigger: GTGCTGTGAATTATGTGCTGTATTGACTCTCAAGCATGATGACCATTGGTGGTTTCTGTACCATTTCCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
3UTR CCA 72 bp ACAGCTGCCAATAAAATCTGCATGGACACCTACCTTTaGTTAATGGTATTGTACCACATAAGAGAGAGCATC +
Preference number: 3 (lower is better)
Translates to: TAANKICMDTYL*LMVLYHIRESI
Trigger: GATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCATGCAGATTTTATTGGCAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR-3UTR CAA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATAATGGGTATAGGGGATaGGGATTGAGCATGAGAAAC +
Preference number: 3 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNNGYRG*GLSMRN
Trigger: GTTTCTCATGCTCAATCCCAATCCCCTATACCCATT...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560638.1
3UTR TCA 72 bp TTTCTCAGCTGCCAGCTCTATCCTATAGGGACTTTCTaGCTGATTAATCAGGTCAAAAGAATATTGACCTTT +
Preference number: 3 (lower is better)
Translates to: FLSCQLYPIGTF*LINQVKRILTF
Trigger: AAAGGTCAATATTCTTTTGACCTGATTAATCAGTCAGAAAGTCCCTATAGGATAGAGCTGGCAGCTGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR CCA 72 bp CAAAACAAAAACAGTATAGATGAAAGGCAGCCAGCCTaGGTTCAAATCCTACCGTTGCTACTTATTATTAAA +
Preference number: 3 (lower is better)
Translates to: QNKNSIDERQPA*VQILPLLLIIK
Trigger: TTTAATAATAAGTAGCAACGGTAGGATTTGAACCCAGGCTGGCTGCCTTTCATCTATACTGTTTTTGTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGACCAACTCCTCCGGGTaGCTGGCCACAGGGACGCGC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQTNSSG*LATGTR
Trigger: GCGCGTCCCTGTGGCCAGTCACCCGGAGGAGTTGGT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCACTCCTCCGGGTGACTaGCCACAGGGACGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITTPPGD*PQGRAR
Trigger: GCGGGCGCGTCCCTGTGGCCAGTCACCCGGAGGAGT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGCGGTTGTGGTGAGCTaGGATCGCACCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQAVVVS*DRTTAL
Trigger: GAGTGCAGTGGTGCGATCTCAGCTCACCACAACCGC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGACTCCTGAGCCCAAGTaGTCCACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQTPEPK*STCLGL
Trigger: GAGGCCAAGGCAGGTGGATCACTTGGGCTCAGGAGT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGGAGTCTCGCACTGTTaGCCAGGCTGGAGCGCAATG +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISGVSHC*PGWSAM
Trigger: CATTGCGCTCCAGCCTGGGCAACAGTGCGAGACTCC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGTGTTAGCAGCCAGGTaGGGTGGCTCACAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQVLAAR*GGSQGQ
Trigger: CTGACCTTGTGAGCCACCGCACCTGGCTGCTAACAC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTACCAACTCCTCCGGGTaGCTGGCCACAGGGACGCGC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSTNSSG*LATGTR
Trigger: GCGCGTCCCTGTGGCCAGTCACCCGGAGGAGTTGGT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCCAAACGATACACTGTaGCAGGCTCCCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQPNDTL*QAPLLE
Trigger: CTCCAAGAGGGGAGCCTGTCACAGTGTATCGTTTGG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCTGGTCTCAAACTCCTaGGCCCAAGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLVSNS*AQVIHL
Trigger: CAGGTGGATCACTTGGGCTCAGGAGTTTGAGACCAG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGGCGAGAGGATCACTTaGGCCCAGGAATTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQGERIT*AQEFET
Trigger: GGTCTCAAATTCCTGGGCTCAAGTGATCCTCTCGCC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGACTGAGGAGTGCTGCTaGAGGTATTTCGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQTEECC*RYFGQT
Trigger: GGTCTGGCCGAAATACCTCCAGCAGCACTCCTCAGT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACAGGCTGGAGTGCAGTaGCAGCAATCTAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISQAGVQ*QQSRLT
Trigger: AGTGAGCCTAGATTGCTGCCACTGCACTCCAGCCTG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTTGAGCCCAGGAATTTaGGACCAGCGTGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLSPGI*DQRGQQ
Trigger: TTGTTGCCCACGCTGGTCTCAAATTCCTGGGCTCAA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCCTGCCTCAGCCTCCTaGGTAGCTGGGCCTACAGGC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSPASAS*VAGPTG
Trigger: GCCTGTAGGCCCAGCTACTCAGGAGGCTGAGGCAGG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAAACGGGCCATGACCTaGCTCTTCATAAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISKRAMT*LFIRQA
Trigger: GGCTTGCCTTATGAAGAGGCAGGTCATGGCCCGTTT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATCTCTGTCGCAGTTCTaGAGGGGAAACAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISSLSQF*RGNSTW
Trigger: CCAAGTGCTGTTTCCCCTCCAGAACTGCGACAGAGA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAGACTCCTGAGTAGCTaGGATTACAGGCACTCACCG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQRLLSS*DYRHSP
Trigger: CGGTGAGTGCCTGTAATCCCAGCTACTCAGGAGTCT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGTTCTCTTCTCAGTCTaGCTTCCGCCCCATACTTTC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQVLFSV*LPPHTF
Trigger: GAAAGTATGGGGCGGAAGTCAGACTGAGAAGAGAAC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAGCACGAGAATTGCTTaGTCTTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQSTRIA*SWEAEV
Trigger: AACCTCTGCCTCCCAAGATCAAGCAATTCTCGTGCT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATGCTACTCAATCCAGTaGAGTCTTGAGGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISCYSIQ*SLEGPF
Trigger: GAAGGGACCCTCAAGACTTCACTGGATTGAGTAGCA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGACCCTCAAATATAAGTaGCACCACAGGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQTLKYK*HHRDTL
Trigger: CAGGGTGTCCCTGTGGTGGCACTTATATTTGAGGGT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGCAGATCTGCAGCTCTaGCTGTTCCTTCACACACAA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQADLQL*LFLHTQ
Trigger: TTGTGTGTGAAGGAACAGGCAGAGCTGCAGATCTGC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAATATCGGGCTCTGCTaGATCAGGAAGATTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISNIGLC*IRKIPS
Trigger: GGAGGGAATCTTCCTGATGCAGCAGAGCCCGATATT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAATATCGGGCTCTGCTaGATCAGGAAGATTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQNIGLC*IRKIPS
Trigger: GGAGGGAATCTTCCTGATGCAGCAGAGCCCGATATT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTCACCCAGGCTGGAGTaGAGTGGCAGCAATCTAGGC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITSPRLE*SGSNLG
Trigger: GCCTAGATTGCTGCCACTGCACTCCAGCCTGGGTGA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGACTGCTTGAAGAAATaGAGTCAACCACGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISDCLKK*SQPRPR
Trigger: CCTGGGACGTGGTTGACTCCATTTCTTCAAGCAGTC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATCTATCCAGGATTTCTaGGACATTCTCCTCACGGGG +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISSIQDF*DILLTG
Trigger: CCCCGTGAGGAGAATGTCCCAGAAATCCTGGATAGA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGCAATTCTACCACTTTaGGAAGCTCAGGCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQAILPL*EAQARG
Trigger: TCCTCTCGCCTGAGCTTCCCAAAGTGGTAGAATTGC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCCTGGAAGGCATCTGTaGGGGTCCTTGGAACTTGGT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITPGRHL*GSLELG
Trigger: ACCAAGTTCCAAGGACCCTCACAGATGCCTTCCAGG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATTCCAAGCAACTGCTTaGTTCGTGGGTGAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISFQATA*FVGEAQ
Trigger: TTGAGCTTCACCCACGAATCAAGCAGTTGCTTGGAA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCCAAACGATACACTGTaGCAGGCTCCCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITPNDTL*QAPLLE
Trigger: CTCCAAGAGGGGAGCCTGTCACAGTGTATCGTTTGG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGCAACTGAGGAGTGCTaGTGGAGGTATTTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITATEEC*WRYFGQ
Trigger: CTGGCCGAAATACCTCCAGCAGCACTCCTCAGTTGC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAGCTGGAACTACAGGTaGACACCATCACATCCAGTT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISSWNYR*TPSHPV
Trigger: AACTGGATGTGATGGTGTGCACCTGTAGTTCCAGCT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCACTGAGGAGTGCTGCTaGAGGTATTTCGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITTEECC*RYFGQT
Trigger: GGTCTGGCCGAAATACCTCCAGCAGCACTCCTCAGT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAGCCAGGCATTATGGTaGGTACCTGTAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISSQALW*VPVISA
Trigger: AGCTGAGATTACAGGTACCCACCATAATGCCTGGCT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCAGCAAGCAAGGTATTaGGTGCTACTCAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQQQARY*VLLNPV
Trigger: CACTGGATTGAGTAGCACCCAATACCTTGCTTGCTG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGCAGAAGTTGCAGAATaGCTTCAGGTTTGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISAEVAE*LQVWCH
Trigger: ATGACACCAAACCTGAAGTCATTCTGCAACTTCTGC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGCAGAAGTTGCAGAATaGCTTCAGGTTTGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQAEVAE*LQVWCH
Trigger: ATGACACCAAACCTGAAGTCATTCTGCAACTTCTGC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATGGAAGCATGTTCTTTaGGGGCATCTCCAACATGTT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISWKHVL*GHLQHV
Trigger: AACATGTTGGAGATGCCCTCAAAGAACATGCTTCCA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGGAATGGAAGTTCTGTaGCAGTCAGTAAATCCAGCA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQGMEVL*QSVNPA
Trigger: TGCTGGATTTACTGACTGTCACAGAACTTCCATTCC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAATCCAGTGAAGTCTTaGGGGTCCCTTCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITNPVKS*GSLPSV
Trigger: CACAGAGGGAAGGGACCCTCAAGACTTCACTGGATT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGGGCTCTGTTCTGTATaGTTTTCCACAGACCATTCT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQGLCSV*FSTDHS
Trigger: AGAATGGTCTGTGGAAAAGCATACAGAACAGAGCCC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAATAATATCGGGCTCTaGTGCATCAGGAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQNNIGL*CIRKIP
Trigger: GGGAATCTTCCTGATGCAGCAGAGCCCGATATTATT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTTCGCAACTGAGGAGTaGTGCTGGAGGTATTTCGGC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITFATEE*CWRYFG
Trigger: GCCGAAATACCTCCAGCAGCACTCCTCAGTTGCGAA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATGGTCGGTAGGGCTGTaGTGTCTTAATGAAATGGTT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISWSVGL*CLNEMV
Trigger: AACCATTTCATTAAGACAGCACAGCCCTACCGACCA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTTTCCAAGTGGCTTTTaGAACTTGGCTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQFPSGF*NLAEMV
Trigger: CACCATCTCAGCCAAGTTGCAAAAGCCACTTGGAAA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGCTGCCAATAAAATCTaGATGGACACCTACCTTTGG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQAANKI*MDTYLW
Trigger: CCAAAGGTAGGTGTCCATGCAGATTTTATTGGCAGC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGGCATAAGGTTGCACTaGAATCTGCCAGTATCACAT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISGIRLH*NLPVSH
Trigger: ATGTGATACTGGCAGATTGCAGTGCAACCTTATGCC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGGCATAAGGTTGCACTaGAATCTGCCAGTATCACAT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQGIRLH*NLPVSH
Trigger: ATGTGATACTGGCAGATTGCAGTGCAACCTTATGCC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCACGTGTGGTGGTGCATaGCTGTGGTTCCACCTAATC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITTCGGA*LWFHLI
Trigger: GATTAGGTGGAACCACAGGCATGCACCACCACACGT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAACAAATTTGACATCCTaGAAGGCATCTGTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISTNLTS*KASVRV
Trigger: GACCCTCACAGATGCCTTCCAGGATGTCAAATTTGT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTCCATAAGCATCCGTTaGGCTCTGTTCTGTATGCTT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQSISIR*ALFCML
Trigger: AAGCATACAGAACAGAGCCCAACGGATGCTTATGGA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATCCATAAGCATCCGTTaGGCTCTGTTCTGTATGCTT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISSISIR*ALFCML
Trigger: AAGCATACAGAACAGAGCCCAACGGATGCTTATGGA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATTCAATCACTCCCCATaGAGCTATTCCGATAGTGCA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISFNHSP*SYSDSA
Trigger: TGCACTATCGGAATAGCTCCATGGGGAGTGATTGAA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAACTGTATCAATCTTTaGTCGGTAGGGCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISNCINL*SVGLCC
Trigger: ACAGCACAGCCCTACCGACCAAAGATTGATACAGTT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGCTTCCGACGCTTTCTaGGCAGTGAGTGTTTTTAAT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQASDAF*AVSVFN
Trigger: ATTAAAAACACTCACTGCCCAGAAAGCGTCGGAAGC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTCTCTGTCGCAGTTCTaGAGGGGAAACAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITSLSQF*RGNSTW
Trigger: CCAAGTGCTGTTTCCCCTCCAGAACTGCGACAGAGA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAGCAGCCAGGTGCGGTaGCTCACAAGGTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSSSQVR*LTRSGV
Trigger: AACTCCTGACCTTGTGAGCCACCGCACCTGGCTGCT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAAAATTAGGTACGTGTaGTGGTGCATGCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQKIRYV*WCMPVV
Trigger: AACCACAGGCATGCACCACCACACGTACCTAATTTT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAATCAGCCAGGCATTATaGTGGGTACCTGTAATCTCA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISISQAL*WVPVIS
Trigger: TGAGATTACAGGTACCCACCATAATGCCTGGCTGAT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCCAGGACCACAGATTTaGGGGATAACAGAATCATTT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQPGPQI*GITESF
Trigger: AAATGATTCTGTTATCCCTCAAATCTGTGGTCCTGG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGAGGATATCATGTTCTaGCCAGGTACACTGTACTTT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQEDIMF*PGTLYF
Trigger: AAAGTACAGTGTACCTGGTCAGAACATGATATCCTC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGACCACAAAAACACCTaGCGAGTTGCTGACAAATTT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISDHKNT*RVADKF
Trigger: AAATTTGTCAGCAACTCGTCAGGTGTTTTTGTGGTC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGAAGATTTCCCTGTTTaGCGTCTCGAACAAGATGAA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQEDFPV*RLEQDE
Trigger: TTCATCTTGTTCGAGACGTCAAACAGGGAAATCTTC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGAAGATTTCCCTGTTTaGCGTCTCGAACAAGATGAA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISEDFPV*RLEQDE
Trigger: TTCATCTTGTTCGAGACGTCAAACAGGGAAATCTTC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACCACTCTTTCAAAAGTaGCACGAATTCTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISPLFQK*HEFSLH
Trigger: GTGAAGAGAGAATTCGTGTCACTTTTGAAAGAGTGG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCATCTACCGTCAGGGCTaGAAGATCTTGCAAATGGCC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITIYRQG*KILQMA
Trigger: GGCCATTTGCAAGATCTTTCAGCCCTGACGGTAGAT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCTGAAGATTCAAATCTaGAGGCTCATCCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLKIQI*RLILRK
Trigger: TTTCCTCAGGATGAGCCTTCAGATTTGAATCTTCAG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAACCAAAAGGCTGCGTaGTTTCTTCATTTCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQNQKAA*FLHFPS
Trigger: ACTAGGGAAATGAAGAAATCACGCAGCCTTTTGGTT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAACCAAAAGGCTGCGTaGTTTCTTCATTTCCCTAGT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISNQKAA*FLHFPS
Trigger: ACTAGGGAAATGAAGAAATCACGCAGCCTTTTGGTT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAAATACCGTCCCTCTTaGAAATGGTCTTCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQKYRPS*KWSSVQ
Trigger: CTGAACTGAAGACCATTTTCAAGAGGGACGGTATTT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGAAAACAACATAGTCTaGCTTGAGAGTGGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQENNIV*LESGES
Trigger: ACTTTCCCCACTCTCAAGTCAGACTATGTTGTTTTC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCCCTCTTGGTCAAAGTaGTTTCTATCCAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQPSWSK*FLSRIS
Trigger: AGAAATCCTGGATAGAAAGCACTTTGACCAAGAGGG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGTAAAACAAGCATGTTaGTTGACCAAGCGACCACAA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQVKQAC*LTKRPQ
Trigger: TTGTGGTCGCTTGGTCAAGCAACATGCTTGTTTTAC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAATCTCCAACATGTTTTaGCACACCTGTGTTTACTCC +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISISNMF*HTCVYS
Trigger: GGAGTAAACACAGGTGTGGCAAAACATGTTGGAGAT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCACCCTCAAATATAAGTaGCACCACAGGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITTLKYK*HHRDTL
Trigger: CAGGGTGTCCCTGTGGTGGCACTTATATTTGAGGGT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGCAACTGAGGAGTGCTaGTGGAGGTATTTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSATEEC*WRYFGQ
Trigger: CTGGCCGAAATACCTCCAGCAGCACTCCTCAGTTGC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATCTACCAGGTCACTCTaGTTTGCTTCATATGCCATT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISSTRSL*FASYAI
Trigger: AATGGCATATGAAGCAAAGCAGAGTGACCTGGTAGA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAGGCATGAGCCACCATaGCCCACCAAGACAAACAAA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITRHEPP*PTKTNK
Trigger: TTTGTTTGTCTTGGTGGGGCATGGTGGCTCATGCCT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAGTGAGCCAAGATTGTaGCACTGTACTCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSSEPRL*HCTPAW
Trigger: CCAGGCCGGAGTACAGTGGCACAATCTTGGCTCACT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACACCAATGGTCATCATaGTTGAGAGTCAATACAGCA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISHQWSS*LRVNTA
Trigger: TGCTGTATTGACTCTCAAGCATGATGACCATTGGTG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAGCAAGAGTCCAAGATaGTGCTTCATGAGGATAAAG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQSKSPR*CFMRIK
Trigger: CTTTATCCTCATGAAGCACCATCTTGGACTCTTGCT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGCTAAGAATGATAAGTaGAGGAGGCAGAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISAKNDK*RRQNWF
Trigger: AAACCAGTTCTGCCTCCTCCACTTATCATTCTTAGC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTCTATCCAGGATTTCTaGGACATTCTCCTCACGGGG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITSIQDF*DILLTG
Trigger: CCCCGTGAGGAGAATGTCCCAGAAATCCTGGATAGA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACAACTGCTTGATTCGTaGGTGAAGCTCAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISQLLDS*VKLKFL
Trigger: CAGAAATTTGAGCTTCACCCACGAATCAAGCAGTTG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAGCATCTTGAGATTGTaGGATATGGGACATTTCAGC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQSILRL*DMGHFS
Trigger: GCTGAAATGTCCCATATCCCACAATCTCAAGATGCT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATTTGAGCCAAGTGTTTaGAAATGCTCAGTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISFEPSV*KCSVLV
Trigger: CACGAGAACTGAGCATTTCCAAACACTTGGCTCAAA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGACAGGCTCCCCTCTTaGAGGCACAGGTGTAAATGG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSDRLPS*RHRCKW
Trigger: CCATTTACACCTGTGCCTCCAAGAGGGGAGCCTGTC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCATTAGGTACGTGTGGTaGTGCATGCCTGTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITIRYVW*CMPVVP
Trigger: TGGAACCACAGGCATGCACCACCACACGTACCTAAT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGCAACCTCCACCTCTTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITATSTS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAAGAGGTGGAGGTTGC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAAACCACTGTCCTGCTaGATGGCAATACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITKPLSC*MAIQQE
Trigger: TTCCTGCTGTATTGCCATTCAGCAGGACAGTGGTTT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAACCCAATTTCACATCTaGGTATTTCATGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISTQFHI*VFHGKT
Trigger: AGTCTTGCCATGAAATACTCAGATGTGAAATTGGGT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAACGTCTCGAACAAGATaGAACAGCATTGGATTAGTT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISTSRTR*NSIGLV
Trigger: AACTAATCCAATGCTGTTTCATCTTGTTCGAGACGT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCCAACTTCTTTAATCTaGATGCACATCTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQPTSLI*MHICST
Trigger: AGTGGAACAGATGTGCATTCAGATTAAAGAAGTTGG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGACGCTTTCTGGGCAGTaGGTGTTTTTAATGTATCTA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQTLSGQ*VFLMYL
Trigger: TAGATACATTAAAAACACTCACTGCCCAGAAAGCGT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATGCTCAGTTCTCGTGTaGTTTCATTATGAACTTTGC +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISCSVLV*FHYELC
Trigger: GCAAAGTTCATAATGAAATCACACGAGAACTGAGCA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACTTTTGCAACTTGGCTaGGATGGTGTACTAACAAAA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLLQLG*DGVLTK
Trigger: TTTTGTTAGTACACCATCTCAGCCAAGTTGCAAAAG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATCTGCTTGTTTTGAATaGACAGGAATGGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISSACFE*TGMEVL
Trigger: CAGAACTTCCATTCCTGTTCATTCAAAACAAGCAGA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGGGAGGTGGATCACTTaGGGTCAGGAGTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSGRWIT*GQEFEI
Trigger: GATCTCAAACTCCTGACCTCAAGTGATCCACCTCCC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAATGGTCATCATGCTTaGGAGTCAATACAGCACATA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISNGHHA*ESIQHI
Trigger: TATGTGCTGTATTGACTCTCAAGCATGATGACCATT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCAACATAGTCTGACTTaGGAGTGGGGAAAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITQHSLT*EWGKWN
Trigger: GTTCCACTTTCCCCACTCTCAAGTCAGACTATGTTG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCGTAAGCTTTTGTGCTaGTCTCTGTTGTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQRKLLC*SLLLNF
Trigger: GAAATTCAACAACAGAGAGCAGCACAAAAGCTTACG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGGATCTCTTTTCTTCTaGTTTTATCACAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQGSLFF*FYHRWV
Trigger: GACCCATCTGTGATAAAAGCAGAAGAAAAGAGATCC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGGCTCCAGTTGTAACTaGAGCTTTAATAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQGSSCN*SFNKTF
Trigger: AAAGGTCTTATTAAAGCTGCAGTTACAACTGGAGCC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGCTCCTTTCTTTTCATaGACTCCATCAGTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQAPFFS*TPSVFE
Trigger: TTCAAACACTGATGGAGTGCATGAAAAGAAAGGAGC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTTCGCAACTGAGGAGTaGTGCTGGAGGTATTTCGGC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSFATEE*CWRYFG
Trigger: GCCGAAATACCTCCAGCAGCACTCCTCAGTTGCGAA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAACCTCTGTAAATCCATaGTATCTCTGTGTCCTACAA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISTSVNP*YLCVLQ
Trigger: TTGTAGGACACAGAGATAGCATGGATTTACAGAGGT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTTAAAATTTCTCAGCTaGCAGCTCTATCCTATAGGG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLKFLS*QLYPIG
Trigger: CCCTATAGGATAGAGCTGGCAGCTGAGAAATTTTAA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGGTTGCACTGCAATCTaGCAGTATCACATAATGATA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISGCTAI*QYHIMI
Trigger: TATCATTATGTGATACTGGCAGATTGCAGTGCAACC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGGTTGCACTGCAATCTaGCAGTATCACATAATGATA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQGCTAI*QYHIMI
Trigger: TATCATTATGTGATACTGGCAGATTGCAGTGCAACC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCAGCTTATCATCTCTTaGCTTGTCTGTATCTATGAG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQQLIIS*LVCIYE
Trigger: CTCATAGATACAGACAAGGCAAGAGATGATAAGCTG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGATACACATTCCCTCTTaGTCAAAGTGCTTTCTATCC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQIHIPS*SKCFLS
Trigger: GGATAGAAAGCACTTTGACCAAGAGGGAATGTGTAT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCAACAAGCATCTAGTTaGGAACCAGTGATATCATCA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQQQASS*EPVISS
Trigger: TGATGATATCACTGGTTCCCAACTAGATGCTTGTTG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGAAAGGCAGCCAGCCTaGGTTCAAATCCTACCGTTG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSERQPA*VQILPL
Trigger: CAACGGTAGGATTTGAACCCAGGCTGGCTGCCTTTC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGGTGGTGCATGCCTGTaGTTCCACCTAATCAAGAGG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSGGACL*FHLIKR
Trigger: CCTCTTGATTAGGTGGAACCACAGGCATGCACCACC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAGGTACACTGTACTTTaGCAGCTCTTCGTAAACCTC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITRYTVL*QLFVNL
Trigger: GAGGTTTACGAAGAGCTGTCAAAGTACAGTGTACCT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGCTGCTCTCTGTTGTTaGATTTCTCTCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITAALCC*ISLRQR
Trigger: TCTCTGTCTGAGAGAAATTCAACAACAGAGAGCAGC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTGCTTGATTCGTGGGTaGAGCTCAAATTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITCLIRG*SSNFCM
Trigger: CATGCAGAAATTTGAGCTTCACCCACGAATCAAGCA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTGGAAGCATGTTCTTTaGGGGCATCTCCAACATGTT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITWKHVL*GHLQHV
Trigger: AACATGTTGGAGATGCCCTCAAAGAACATGCTTCCA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGTTCTCTTCTCAGTCTaGCTTCCGCCCCATACTTTC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSVLFSV*LPPHTF
Trigger: GAAAGTATGGGGCGGAAGTCAGACTGAGAAGAGAAC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAATCTTGATGTTCATCTaGCCCAATATGGAAAACAGT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISILMFI*PNMENS
Trigger: ACTGTTTTCCATATTGGGTCAGATGAACATCAAGAT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGCTACATCTATATCTTaGTGTTCATCTGACCCAATA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISATSIS*CSSDPI
Trigger: TATTGGGTCAGATGAACATCAAGATATAGATGTAGC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTATCTACCGTCAGGGCTaGAAGATCTTGCAAATGGCC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSIYRQG*KILQMA
Trigger: GGCCATTTGCAAGATCTTTCAGCCCTGACGGTAGAT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCTTTCAAGATCACCTTaGGGAAGAGAGGAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITLSRSP*GREELS
Trigger: ACTTAGCTCCTCTCTTCCTCAAGGTGATCTTGAAAG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGGAATGGAAGTTCTGTaGCAGTCAGTAAATCCAGCA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITGMEVL*QSVNPA
Trigger: TGCTGGATTTACTGACTGTCACAGAACTTCCATTCC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGCCTGGCCAACAAGGTaGAACCTTGTCTCTACGAAA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSAWPTR*NLVSTK
Trigger: TTTCGTAGAGACAAGGTTTCACCTTGTTGGCCAGGC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAAGAGTCCAAGATGGTaGTTCATGAGGATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQKSPRW*FMRIKY
Trigger: ATACTTTATCCTCATGAAGCACCATCTTGGACTCTT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAAGAGTCCAAGATGGTaGTTCATGAGGATAAAGTAT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISKSPRW*FMRIKY
Trigger: ATACTTTATCCTCATGAAGCACCATCTTGGACTCTT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTACAAAGAGGTAGACTaGTTGAAGAAATGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQYKEVD*LKKWSQ
Trigger: TTGACTCCATTTCTTCAAGCAGTCTACCTCTTTGTA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATTTCATGGCAAGACTTaGAGTAAAACAAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISFHGKT*SKTSML
Trigger: CAACATGCTTGTTTTACTGCAAGTCTTGCCATGAAA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGGGCTCTGTTCTGTATaGTTTTCCACAGACCATTCT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITGLCSV*FSTDHS
Trigger: AGAATGGTCTGTGGAAAAGCATACAGAACAGAGCCC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATCAAAACATTCAATTTaGTCAGGGGGTTCAATAAGG +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISSKHSI*SGGSIR
Trigger: CCTTATTGAACCCCCTGAGCAAATTGAATGTTTTGA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGCAGATCTGCAGCTCTaGCTGTTCCTTCACACACAA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSADLQL*LFLHTQ
Trigger: TTGTGTGTGAAGGAACAGGCAGAGCTGCAGATCTGC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGATAAGCTGGTCAAATaGAGATGCATTAGTACCTTT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISDKLVK*RCISTF
Trigger: AAAGGTACTAATGCATCTGCATTTGACCAGCTTATC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGGCAACTGAGGAGTGCTaGTGGAGGTATTTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRATEEC*WRYFGQ
Trigger: CTGGCCGAAATACCTCCAGCAGCACTCCTCAGTTGC...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTGGTCGGTAGGGCTGTaGTGTCTTAATGAAATGGTT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITWSVGL*CLNEMV
Trigger: AACCATTTCATTAAGACAGCACAGCCCTACCGACCA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTTTCCAAGTGGCTTTTaGAACTTGGCTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITFPSGF*NLAEMV
Trigger: CACCATCTCAGCCAAGTTGCAAAAGCCACTTGGAAA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGACTGCTTGAAGAAATaGAGTCAACCACGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSDCLKK*SQPRPR
Trigger: CCTGGGACGTGGTTGACTCCATTTCTTCAAGCAGTC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATTAAAAACTCTATTTTaGCACAGAGGCCTAGTTGTG +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLKTLF*HRGLVV
Trigger: CACAACTAGGCCTCTGTGCCAAAATAGAGTTTTTAA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTTAAAAACTCTATTTTaGCACAGAGGCCTAGTTGTG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLKTLF*HRGLVV
Trigger: CACAACTAGGCCTCTGTGCCAAAATAGAGTTTTTAA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGAACCTTGGAGAATATaGTATGGATTTGGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQEPWRI*YGFGFH
Trigger: ATGAAACCCAAATCCATACCATATTCTCCAAGGTTC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCACTGTCCTGCTGAATaGCAATACAGCAGGAAAACT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITHCPAE*QYSRKT
Trigger: AGTTTTCCTGCTGTATTGCCATTCAGCAGGACAGTG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCACAAATTTGACATCCTaGAAGGCATCTGTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITTNLTS*KASVRV
Trigger: GACCCTCACAGATGCCTTCCAGGATGTCAAATTTGT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCAGCATTGGATTAGTTaGACCTTGTTTAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQQHWIS*TLFSVV
Trigger: TACAACACTAAACAAGGTCCAACTAATCCAATGCTG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAGTGATCTTATATCCTaGAGGAAGATTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISSDLIS*RKISLF
Trigger: AAACAGGGAAATCTTCCTCCAGGATATAAGATCACT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATACTGAGGAGTGCTGCTaGAGGTATTTCGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNTEECC*RYFGQT
Trigger: GGTCTGGCCGAAATACCTCCAGCAGCACTCCTCAGT...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAACTGTATCAATCTTTaGTCGGTAGGGCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITNCINL*SVGLCC
Trigger: ACAGCACAGCCCTACCGACCAAAGATTGATACAGTT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAAAGCGCTTGGTTTCTaGATCATCAATGTCTACAAT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQKALGF*IINVYN
Trigger: ATTGTAGACATTGATGATCCAGAAACCAAGCGCTTT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGCTTCCGACGCTTTCTaGGCAGTGAGTGTTTTTAAT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITASDAF*AVSVFN
Trigger: ATTAAAAACACTCACTGCCCAGAAAGCGTCGGAAGC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAATTCTGATTCTTTGGTaGAATTTCCAGGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISILILW*NFQAED
Trigger: ATCTTCAGCCTGGAAATTCCACCAAAGAATCAGAAT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTTGATTCTGATTCTTTaGTGGAATTTCCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLILIL*WNFQAE
Trigger: TTCAGCCTGGAAATTCCACCAAAGAATCAGAATCAA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGTGAGCCACTGCACCTaGCCGAGAATTCCACATTTT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSVSHCT*PRIPHF
Trigger: AAAATGTGGAATTCTCGGCCAGGTGCAGTGGCTCAC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAAACCACTGTCCTGCTaGATGGCAATACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSKPLSC*MAIQQE
Trigger: TTCCTGCTGTATTGCCATTCAGCAGGACAGTGGTTT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTGCTTCATATGCCATTaGACGATAGATCTTACAGGC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITCFICH*TIDLTG
Trigger: GCCTGTAAGATCTATCGTTCAATGGCATATGAAGCA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCTGAAGATTCAAATCTaGAGGCTCATCCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITLKIQI*RLILRK
Trigger: TTTCCTCAGGATGAGCCTTCAGATTTGAATCTTCAG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCTCCCGAGGGAAAAGTaGCACAGTAACATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSLPREK*HSNISV
Trigger: CACAGAAATGTTACTGTGTCACTTTTCCCTCGGGAG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCACTTCCCTTGACGAGTaGGTTAGGTTTCTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITTSLDE*VRFLLL
Trigger: TAAAAGCAGAAACCTAACTCACTCGTCAAGGGAAGT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGTAAAACAAGCATGTTaGTTGACCAAGCGACCACAA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITVKQAC*LTKRPQ
Trigger: TTGTGGTCGCTTGGTCAAGCAACATGCTTGTTTTAC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCAGTGCAGTAAGTATTaGTACATCTATATCTTGATG +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQQCSKY*YIYILM
Trigger: CATCAAGATATAGATGTAGCAATACTTACTGCACTG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp GTGATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATATTCGCAACTGAGGAGTaGTGCTGGAGGTATTTCGGC +
Preference number: 4 (lower is better)
Translates to: VICLHLLKFPRMNRNFRIFATEE*CWRYFG
Trigger: GCCGAAATACCTCCAGCAGCACTCCTCAGTTGCGAA...TATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR GCA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATAAACGGGCCATGACCTaGCTCTTCATAAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNKRAMT*LFIRQA
Trigger: GGCTTGCCTTATGAAGAGGCAGGTCATGGCCCGTTT...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTCTACCAGGTCACTCTaGTTTGCTTCATATGCCATT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITSTRSL*FASYAI
Trigger: AATGGCATATGAAGCAAAGCAGAGTGACCTGGTAGA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGTATTTACAACACCATaGTTTTTCCATACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISVFTTP*FFHTEG
Trigger: ACCTTCTGTATGGAAAAAGCATGGTGTTGTAAATAC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTCTGTGTCCTACAAATaGTCCAAATTCTGTATTATC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQSVSYK*SKFCII
Trigger: GATAATACAGAATTTGGAGCATTTGTAGGACACAGA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTTCAAGCAATTCTCCTaGCTCAGACTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSFKQFS*LRLLSS
Trigger: GCTACTCAGGAGTCTGAGGCAGGAGAATTGCTTGAA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAACTTCAAGGAACCTTaGAGAATATGGTATGGATTT +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISNFKEP*RIWYGF
Trigger: AAATCCATACCATATTCTCCAAGGTTCCTTGAAGTT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAGGGTCCTTGGAACTTaGTATAATATATACACATTC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQRVLGT*YNIYTF
Trigger: GAATGTGTATATATTATACCAAGTTCCAAGGACCCT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCAACTGCTTGATTCGTaGGTGAAGCTCAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITQLLDS*VKLKFL
Trigger: CAGAAATTTGAGCTTCACCCACGAATCAAGCAGTTG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAATGTAAGGATAAGCTaGTCAAATGCAGATGCATTA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQNVRIS*SNADAL
Trigger: TAATGCATCTGCATTTGACCAGCTTATCCTTACATT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCAAATACATGATTTTTaGCAATGTCAACTCTATCCC +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQQIHDF*QCQLYP
Trigger: GGGATAGAGTTGACATTGCCAAAAATCATGTATTTG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAAGATGAAACAGCATTaGATTAGTTGGACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQKMKQH*ISWTLF
Trigger: AAACAAGGTCCAACTAATCCAATGCTGTTTCATCTT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAGCATCTTGAGATTGTaGGATATGGGACATTTCAGC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITSILRL*DMGHFS
Trigger: GCTGAAATGTCCCATATCCCACAATCTCAAGATGCT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACCAAATATATTACACTaGGGATCTTTGTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISPNILH*GSLSSF
Trigger: GAAAGATGACAAAGATCCCCAGTGTAATATATTTGG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCAGTTTCTTGATCTTTaGTTCCAGTTTCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITQFLDL*FQFPSG
Trigger: GCCACTTGGAAACTGGAACCAAAGATCAAGAAACTG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGTATTAAAGCTGCTTTaGAATCTACTTCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQVLKLL*NLLHEC
Trigger: ACACTCATGAAGTAGATTCCAAAGCAGCTTTAATAC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGATTCCTCTTCAGATCTaGAAGTTTAAGCTTTCTACA +
Preference number: 4 (lower is better)
Translates to: LEQVISLPVANKHLVGNQIPLQI*KFKLST
Trigger: TGTAGAAAGCTTAAACTTCCAGATCTGAAGAGGAAT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGAAGTTTGTAAGTTCTaGGTTGTTGCTATAGATACA +
Preference number: 4 (lower is better)
Translates to: SHFPSRGQQASSWEPVISEVCKF*VVAIDT
Trigger: TGTATCTATAGCAACAACCCAGAACTTACAAACTTC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR CAA 72 bp AGGAAATGGTACAGAAACCACCAATGGTCATCATGCTaGAGAGTCAATACAGCACATAATTCACAGCACAGA +
Preference number: 4 (lower is better)
Translates to: RKWYRNHQWSSC*RVNTAHNSQHR
Trigger: TCTGTGCTGTGAATTATGTGCTGTATTGACTCTCAAGCATGATGACCATTGGTGGTTTCTGTACCATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAGGTACACTGTACTTTaGCAGCTCTTCGTAAACCTC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSRYTVL*QLFVNL
Trigger: GAGGTTTACGAAGAGCTGTCAAAGTACAGTGTACCT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGCTGCTCTCTGTTGTTaGATTTCTCTCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSAALCC*ISLRQR
Trigger: TCTCTGTCTGAGAGAAATTCAACAACAGAGAGCAGC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTGCTTGATTCGTGGGTaGAGCTCAAATTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSCLIRG*SSNFCM
Trigger: CATGCAGAAATTTGAGCTTCACCCACGAATCAAGCA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCATTTGTGTACAGGTGTaGGCTACAAAAGGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITICVQV*ATKGLS
Trigger: ACTTAGACCTTTTGTAGCTCACACCTGTACACAAAT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTGCTCAGTTCTCGTGTaGTTTCATTATGAACTTTGC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITCSVLV*FHYELC
Trigger: GCAAAGTTCATAATGAAATCACACGAGAACTGAGCA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCACTGCAGGTAAGTCTTaGCCAAATATATTACACTGG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITTAGKS*PNILHW
Trigger: CCAGTGTAATATATTTGGTCAAGACTTACCTGCAGT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCTTCATTTCCCTAGTTaGATGGCAATAAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITLHFPS*MAIKQL
Trigger: CAGCTGTTTTATTGCCATTCAACTAGGGAAATGAAG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGGCTCCAGTTGTAACTaGAGCTTTAATAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITGSSCN*SFNKTF
Trigger: AAAGGTCTTATTAAAGCTGCAGTTACAACTGGAGCC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGCTCCTTTCTTTTCATaGACTCCATCAGTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITAPFFS*TPSVFE
Trigger: TTCAAACACTGATGGAGTGCATGAAAAGAAAGGAGC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTTAAAATTTCTCAGCTaGCAGCTCTATCCTATAGGG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITLKFLS*QLYPIG
Trigger: CCCTATAGGATAGAGCTGGCAGCTGAGAAATTTTAA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGCTGCCAATAAAATCTaGATGGACACCTACCTTTGG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSAANKI*MDTYLW
Trigger: CCAAAGGTAGGTGTCCATGCAGATTTTATTGGCAGC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCAGCTTATCATCTCTTaGCTTGTCTGTATCTATGAG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITQLIIS*LVCIYE
Trigger: CTCATAGATACAGACAAGGCAAGAGATGATAAGCTG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGGGTGCAGCAATTCATaGCTGCAATTCTACCACTTT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSGCSNS*LQFYHF
Trigger: AAAGTGGTAGAATTGCAGGCATGAATTGCTGCACCC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCACTGTCCTGCTGAATaGCAATACAGCAGGAAAACT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSHCPAE*QYSRKT
Trigger: AGTTTTCCTGCTGTATTGCCATTCAGCAGGACAGTG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCATGTGACCAGATGCAGTaGCTAGCACTGGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESCDQMQ*LALVIP
Trigger: TGGGATTACCAGTGCTAGCCACTGCATCTGGTCACA...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGTGGCTTTTGCAACTTaGCTGAGATGGTGTACTAAC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSVAFAT*LRWCTN
Trigger: GTTAGTACACCATCTCAGCCAAGTTGCAAAAGCCAC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCAACAAGCATCTAGTTaGGAACCAGTGATATCATCA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITQQASS*EPVISS
Trigger: TGATGATATCACTGGTTCCCAACTAGATGCTTGTTG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCCAGGACCACAGATTTaGGGGATAACAGAATCATTT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSPGPQI*GITESF
Trigger: AAATGATTCTGTTATCCCTCAAATCTGTGGTCCTGG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGATTTGGGTTTCATTTaGTTAAAGGCAAACGTAAGC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITDLGFI*LKANVS
Trigger: GCTTACGTTTGCCTTTAATCAAATGAAACCCAAATC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCAAAACCACTGTCCTGCTaGATGGCAATACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESKPLSC*MAIQQE
Trigger: TTCCTGCTGTATTGCCATTCAGCAGGACAGTGGTTT...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGACCACAAAAACACCTaGCGAGTTGCTGACAAATTT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSDHKNT*RVADKF
Trigger: AAATTTGTCAGCAACTCGTCAGGTGTTTTTGTGGTC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCATTCTTCTATTGCCTaGTTAAAATGGTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITHSSIA*LKWSPN
Trigger: ATTGGGTGACCATTTTAATCAGGCAATAGAAGAATG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCCCCTTGAAAATTTATaGCTCCATAAGCATCCGTTG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSPLENL*LHKHPL
Trigger: CAACGGATGCTTATGGAGTCATAAATTTTCAAGGGG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCATCATCCACCAATATaGAATGGGAATGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITHHPPI*NGNADY
Trigger: ATAATCTGCATTCCCATTTCATATTGGTGGATGATG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGCTACATCTATATCTTaGTGTTCATCTGACCCAATA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITATSIS*CSSDPI
Trigger: TATTGGGTCAGATGAACATCAAGATATAGATGTAGC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTGCTTCATATGCCATTaGACGATAGATCTTACAGGC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSCFICH*TIDLTG
Trigger: GCCTGTAAGATCTATCGTTCAATGGCATATGAAGCA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCCACTCTTTCAAAAGTaGCACGAATTCTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSPLFQK*HEFSLH
Trigger: GTGAAGAGAGAATTCGTGTCACTTTTGAAAGAGTGG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTCATCAATAAGGTTTTaGGCCAAGTGTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITSSIRF*AKCLEM
Trigger: CATTTCCAAACACTTGGCTCAAAACCTTATTGATGA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAGGTCAAAAGAATATTaGCCTTTTAACTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITRSKEY*PFNCAG
Trigger: TCCAGCACAGTTAAAAGGTCAATATTCTTTTGACCT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAAATACCGTCCCTCTTaGAAATGGTCTTCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSKYRPS*KWSSVQ
Trigger: CTGAACTGAAGACCATTTTCAAGAGGGACGGTATTT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTACCTCTCTAGCACCTTaGCTTTCAAATCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSTSLAP*LSNLQN
Trigger: GTTTTGCAGATTTGAAAGTCAAGGTGCTAGAGAGGT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCTCCCATCTCCTCTTTaGTTAAAAACTCTATTTTGG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITLPSPL*LKTLFW
Trigger: CCAAAATAGAGTTTTTAAGCAAAGAGGAGATGGGAG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTTTTCACCAACACCTTaGAAATCAAGTACCAGTAAC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITFSPTP*KSSTSN
Trigger: GTTACTGGTACTTGATTTGCAAGGTGTTGGTGAAAA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCCCTCTTGGTCAAAGTaGTTTCTATCCAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSPSWSK*FLSRIS
Trigger: AGAAATCCTGGATAGAAAGCACTTTGACCAAGAGGG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAGACCATTCTTCTATTaGCTGATTAAAATGGTCACC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITRPFFY*LIKMVT
Trigger: GGTGACCATTTTAATCAGGCAATAGAAGAATGGTCT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTTGGGTAACTCCATTTaGCATTCTTTAAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITLGNSI*HSLSRS
Trigger: ACTTCTGCTTAAAGAATGGCAAATGGAGTTACCCAA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTCAAAACATTCAATTTaGTCAGGGGGTTCAATAAGG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITSKHSI*SGGSIR
Trigger: CCTTATTGAACCCCCTGAGCAAATTGAATGTTTTGA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGATAAGCTGGTCAAATaGAGATGCATTAGTACCTTT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITDKLVK*RCISTF
Trigger: AAAGGTACTAATGCATCTGCATTTGACCAGCTTATC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGTCAACTCTATCCCATaGCAATGTAAGGATAAGCTG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSVNSIP*QCKDKL
Trigger: CAGCTTATCCTTACATTGGCATGGGATAGAGTTGAC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAGCAAGAGTCCAAGATaGTGCTTCATGAGGATAAAG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSSKSPR*CFMRIK
Trigger: CTTTATCCTCATGAAGCACCATCTTGGACTCTTGCT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAAAGCGCTTGGTTTCTaGATCATCAATGTCTACAAT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITKALGF*IINVYN
Trigger: ATTGTAGACATTGATGATCCAGAAACCAAGCGCTTT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTTTGAGCCAAGTGTTTaGAAATGCTCAGTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSFEPSV*KCSVLV
Trigger: CACGAGAACTGAGCATTTCCAAACACTTGGCTCAAA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCAGTTTCTTGATCTTTaGTTCCAGTTTCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSQFLDL*FQFPSG
Trigger: GCCACTTGGAAACTGGAACCAAAGATCAAGAAACTG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCATTTGTATCCATAGCTaGCTTAAATGGAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITICIHS*LKWRSE
Trigger: CTCACTTCTCCATTTAAGCCAGCTATGGATACAAAT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCATTCTGATTCTTTGGTaGAATTTCCAGGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITILILW*NFQAED
Trigger: ATCTTCAGCCTGGAAATTCCACCAAAGAATCAGAAT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTTGATTCTGATTCTTTaGTGGAATTTCCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITLILIL*WNFQAE
Trigger: TTCAGCCTGGAAATTCCACCAAAGAATCAGAATCAA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTACAGAAACCACCAATaGTCATCATGCTTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSYRNHQ*SSCLRV
Trigger: GACTCTCAAGCATGATGACCATTGGTGGTTTCTGTA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCAGCTGCTCTCTGTTGTTaGATTTCTCTCAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESAALCC*ISLRQR
Trigger: TCTCTGTCTGAGAGAAATTCAACAACAGAGAGCAGC...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTACCCAATTTCACATCTaGGTATTTCATGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSTQFHI*VFHGKT
Trigger: AGTCTTGCCATGAAATACTCAGATGTGAAATTGGGT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTATTTGTGTACAGGTGTaGGCTACAAAAGGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSICVQV*ATKGLS
Trigger: ACTTAGACCTTTTGTAGCTCACACCTGTACACAAAT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCCAACTTCTTTAATCTaGATGCACATCTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSPTSLI*MHICST
Trigger: AGTGGAACAGATGTGCATTCAGATTAAAGAAGTTGG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTACGCTTTCTGGGCAGTaGGTGTTTTTAATGTATCTA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSTLSGQ*VFLMYL
Trigger: TAGATACATTAAAAACACTCACTGCCCAGAAAGCGT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTACTGCAGGTAAGTCTTaGCCAAATATATTACACTGG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSTAGKS*PNILHW
Trigger: CCAGTGTAATATATTTGGTCAAGACTTACCTGCAGT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCTTCATTTCCCTAGTTaGATGGCAATAAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSLHFPS*MAIKQL
Trigger: CAGCTGTTTTATTGCCATTCAACTAGGGAAATGAAG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCGTAAGCTTTTGTGCTaGTCTCTGTTGTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSRKLLC*SLLLNF
Trigger: GAAATTCAACAACAGAGAGCAGCACAAAAGCTTACG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp GTGATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATATGGTCGGTAGGGCTGTaGTGTCTTAATGAAATGGTT +
Preference number: 4 (lower is better)
Translates to: VICLHLLKFPRMNRNFRIWSVGL*CLNEMV
Trigger: AACCATTTCATTAAGACAGCACAGCCCTACCGACCA...TATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGTATTTACAACACCATaGTTTTTCCATACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITVFTTP*FFHTEG
Trigger: ACCTTCTGTATGGAAAAAGCATGGTGTTGTAAATAC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTCTGTGTCCTACAAATaGTCCAAATTCTGTATTATC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITSVSYK*SKFCII
Trigger: GATAATACAGAATTTGGAGCATTTGTAGGACACAGA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTACCTCTGTAAATCCATaGTATCTCTGTGTCCTACAA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSTSVNP*YLCVLQ
Trigger: TTGTAGGACACAGAGATAGCATGGATTTACAGAGGT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAACTTCAAGGAACCTTaGAGAATATGGTATGGATTT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITNFKEP*RIWYGF
Trigger: AAATCCATACCATATTCTCCAAGGTTCCTTGAAGTT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCACACTGTCCTGCTGAATaGCAATACAGCAGGAAAACT +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESHCPAE*QYSRKT
Trigger: AGTTTTCCTGCTGTATTGCCATTCAGCAGGACAGTG...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTGTGAGGATAACATTTaGCCCACCCTCAAATATAAG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSCEDNI*PTLKYK
Trigger: CTTATATTTGAGGGTGGGCCAAATGTTATCCTCACA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAATGTAAGGATAAGCTaGTCAAATGCAGATGCATTA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITNVRIS*SNADAL
Trigger: TAATGCATCTGCATTTGACCAGCTTATCCTTACATT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCAAATACATGATTTTTaGCAATGTCAACTCTATCCC +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITQIHDF*QCQLYP
Trigger: GGGATAGAGTTGACATTGCCAAAAATCATGTATTTG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp GTGATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAACTGTATCAATCTTTaGTCGGTAGGGCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VICLHLLKFPRMNRNFRINCINL*SVGLCC
Trigger: ACAGCACAGCCCTACCGACCAAAGATTGATACAGTT...TATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCAATGTAGAACATATTaGCCACCATTTTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITQCRTY*PPFFQS
Trigger: TGATTGGAAAAATGGTGGCCAATATGTTCTACATTG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTATGGACACCTACCTTTaGTTAATGGTATTGTACCAC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSMDTYL*LMVLYH
Trigger: GTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAACGTAAGAATCTTATaGACGTTACTTTACCTCTCT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITNVRIL*TLLYLS
Trigger: AGAGAGGTAAAGTAACGTCCATAAGATTCTTACGTT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CCA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCATATTTAAAATTAGTTaGGTGTTACCCAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: MDTYLWLMVLYHIRESITIFKIS*VLPRHG
Trigger: ACCATGCCTGGGTAACACCCAACTAATTTTAAATAT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCATTCTTCTATTGCCTaGTTAAAATGGTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSHSSIA*LKWSPN
Trigger: ATTGGGTGACCATTTTAATCAGGCAATAGAAGAATG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCATCATCCACCAATATaGAATGGGAATGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSHHPPI*NGNADY
Trigger: ATAATCTGCATTCCCATTTCATATTGGTGGATGATG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATGAAGATTTCCCTGTTTaGCGTCTCGAACAAGATGAA +
Preference number: 4 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNEDFPV*RLEQDE
Trigger: TTCATCTTGTTCGAGACGTCAAACAGGGAAATCTTC...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCTATATCAATCAGAGTaGTCTTATATCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSLYQSE*SYILEE
Trigger: TTCCTCCAGGATATAAGATCACTCTGATTGATATAG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATTGCTTCATATGCCATTaGACGATAGATCTTACAGGC +
Preference number: 4 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNCFICH*TIDLTG
Trigger: GCCTGTAAGATCTATCGTTCAATGGCATATGAAGCA...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR TCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTCATCAATAAGGTTTTaGGCCAAGTGTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSSSIRF*AKCLEM
Trigger: CATTTCCAAACACTTGGCTCAAAACCTTATTGATGA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATAAGGAATGGCAGATGTaGAGTATGAGGCAAACAAAC +
Preference number: 4 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNKEWQM*SMRQTN
Trigger: GTTTGTTTGCCTCATACTTCACATCTGCCATTCCTT...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTACAAAGAGGTAGACTaGTTGAAGAAATGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSYKEVD*LKKWSQ
Trigger: TTGACTCCATTTCTTCAAGCAGTCTACCTCTTTGTA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTTTTCACCAACACCTTaGAAATCAAGTACCAGTAAC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSFSPTP*KSSTSN
Trigger: GTTACTGGTACTTGATTTGCAAGGTGTTGGTGAAAA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTTTCATGGCAAGACTTaGAGTAAAACAAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSFHGKT*SKTSML
Trigger: CAACATGCTTGTTTTACTGCAAGTCTTGCCATGAAA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAGACCATTCTTCTATTaGCTGATTAAAATGGTCACC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSRPFFY*LIKMVT
Trigger: GGTGACCATTTTAATCAGGCAATAGAAGAATGGTCT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTTGGGTAACTCCATTTaGCATTCTTTAAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSLGNSI*HSLSRS
Trigger: ACTTCTGCTTAAAGAATGGCAAATGGAGTTACCCAA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR GCA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGTCTACCAGGTCACTCTaGTTTGCTTCATATGCCATT +
Preference number: 4 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRSTRSL*FASYAI
Trigger: AATGGCATATGAAGCAAAGCAGAGTGACCTGGTAGA...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCAGCATTGGATTAGTTaGACCTTGTTTAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSQHWIS*TLFSVV
Trigger: TACAACACTAAACAAGGTCCAACTAATCCAATGCTG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp GTGATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGCATCTTGAGATTGTaGGATATGGGACATTTCAGC +
Preference number: 4 (lower is better)
Translates to: VICLHLLKFPRMNRNFRISILRL*DMGHFS
Trigger: GCTGAAATGTCCCATATCCCACAATCTCAAGATGCT...TATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTTAAATTCTTTTCTCTaGGGTACTGCAGGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSLNSFL*GTAGKS
Trigger: AGACTTACCTGCAGTACCCCAGAGAAAAGAATTTAA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTATTTGTATCCATAGCTaGCTTAAATGGAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSICIHS*LKWRSE
Trigger: CTCACTTCTCCATTTAAGCCAGCTATGGATACAAAT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
3UTR CAA 72 bp AGAATCTTATGGACGTTACTTTACCTCTCTAGCACCTaGACTTTCAAATCTGCAAAACAGGATAATAACACC +
Preference number: 4 (lower is better)
Translates to: RILWTLLYLSST*TFKSAKQDNNT
Trigger: GGTGTTATTATCCTGTTTTGCAGATTTGAAAGTCAAGGTGCTAGAGAGGTAAAGTAACGTCCATAAGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR TCA 90 bp GTGATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAACGTCTCGAACAAGATaGAACAGCATTGGATTAGTT +
Preference number: 4 (lower is better)
Translates to: VICLHLLKFPRMNRNFRITSRTR*NSIGLV
Trigger: AACTAATCCAATGCTGTTTCATCTTGTTCGAGACGT...TATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAATCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR TCA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATATTTGTGTACAGGTGTaGGCTACAAAAGGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNICVQV*ATKGLS
Trigger: ACTTAGACCTTTTGTAGCTCACACCTGTACACAAAT...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR GCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCACGTAAGCTTTTGTGCTaGTCTCTGTTGTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESRKLLC*SLLLNF
Trigger: GAAATTCAACAACAGAGAGCAGCACAAAAGCTTACG...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR GCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCAGGATCTCTTTTCTTCTaGTTTTATCACAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESGSLFF*FYHRWV
Trigger: GACCCATCTGTGATAAAAGCAGAAGAAAAGAGATCC...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR GCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCAGTGCAGTAAGTATTaGTACATCTATATCTTGATG +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSQCSKY*YIYILM
Trigger: CATCAAGATATAGATGTAGCAATACTTACTGCACTG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCAGTGAGACCTCATCTCTaGAAGTTTAAGCTTTCTACA +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESVRPHL*KFKLST
Trigger: TGTAGAAAGCTTAAACTTCCAGAGATGAGGTCTCAC...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAAGATGAAACAGCATTaGATTAGTTGGACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSKMKQH*ISWTLF
Trigger: AAACAAGGTCCAACTAATCCAATGCTGTTTCATCTT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCAATGTAGAACATATTaGCCACCATTTTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSQCRTY*PPFFQS
Trigger: TGATTGGAAAAATGGTGGCCAATATGTTCTACATTG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCCAAATATATTACACTaGGGATCTTTGTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSPNILH*GSLSSF
Trigger: GAAAGATGACAAAGATCCCCAGTGTAATATATTTGG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGTATTAAAGCTGCTTTaGAATCTACTTCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSVLKLL*NLLHEC
Trigger: ACACTCATGAAGTAGATTCCAAAGCAGCTTTAATAC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTATTCCTCTTCAGATCTaGAAGTTTAAGCTTTCTACA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSIPLQI*KFKLST
Trigger: TGTAGAAAGCTTAAACTTCCAGATCTGAAGAGGAAT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CCA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGAAGTTTGTAAGTTCTaGGTTGTTGCTATAGATACA +
Preference number: 4 (lower is better)
Translates to: IDLLTVLESANSTCIHLSEVCKF*VVAIDT
Trigger: TGTATCTATAGCAACAACCCAGAACTTACAAACTTC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR TCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCAGATTTGGGTTTCATTTaGTTAAAGGCAAACGTAAGC +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESDLGFI*LKANVS
Trigger: GCTTACGTTTGCCTTTAATCAAATGAAACCCAAATC...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR TCA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGCTATATCAATCAGAGTaGTCTTATATCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRLYQSE*SYILEE
Trigger: TTCCTCCAGGATATAAGATCACTCTGATTGATATAG...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR GCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCATTTTCACCAACACCTTaGAAATCAAGTACCAGTAAC +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESFSPTP*KSSTSN
Trigger: GTTACTGGTACTTGATTTGCAAGGTGTTGGTGAAAA...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR GCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCAACGAAACCTTTAATGTaGTTTTACTATCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESTKPLM*FYYLPL
Trigger: CAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGT...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCAGAACCTTGGAGAATATaGTATGGATTTGGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESEPWRI*YGFGFH
Trigger: ATGAAACCCAAATCCATACCATATTCTCCAAGGTTC...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CCA 90 bp GTGATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATACAGCATTGGATTAGTTaGACCTTGTTTAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: VICLHLLKFPRMNRNFRIQHWIS*TLFSVV
Trigger: TACAACACTAAACAAGGTCCAACTAATCCAATGCTG...TATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAATCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CCA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATAGTGATCTTATATCCTaGAGGAAGATTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNSDLIS*RKISLF
Trigger: AAACAGGGAAATCTTCCTCCAGGATATAAGATCACT...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CCA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAAAGCGCTTGGTTTCTaGATCATCAATGTCTACAAT +
Preference number: 4 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRKALGF*IINVYN
Trigger: ATTGTAGACATTGATGATCCAGAAACCAAGCGCTTT...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CCA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCAAACTTCAAGGAACCTTaGAGAATATGGTATGGATTT +
Preference number: 4 (lower is better)
Translates to: FPNRNETFNVLLLSSPESNFKEP*RIWYGF
Trigger: AAATCCATACCATATTCTCCAAGGTTCCTTGAAGTT...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CCA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAAGATGAAACAGCATTaGATTAGTTGGACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRKMKQH*ISWTLF
Trigger: AAACAAGGTCCAACTAATCCAATGCTGTTTCATCTT...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS CCA 90 bp GAAGCCGAGTCTTTCATAATTGTGCGACCAACTCCTCCGGGTGACTaGCCACAGGGACGCGCCCGCGCCCGCCTCCGCCGGCGACGGGGC +
Preference number: 5 (lower is better)
Translates to: EAESFIIVRPTPPGD*PQGRARARLRRRRG
Trigger: GCCCCGTCGCCGGCGGAGGCGGGCGCGGGCGCGTCCCTGTGGCCAGTCACCCGGAGGAGTTGGTCGCACAATTATGAAAGACTCGGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS TCA 90 bp AGCAGAAGCCGAGTCTTTCATAATTGTGCGACCAACTCCTCCGGGTaGCTGGCCACAGGGACGCGCCCGCGCCCGCCTCCGCCGGCGACG +
Preference number: 5 (lower is better)
Translates to: SRSRVFHNCATNSSG*LATGTRPRPPPPAT
Trigger: CGTCGCCGGCGGAGGCGGGCGCGGGCGCGTCCCTGTGGCCAGTCACCCGGAGGAGTTGGTCGCACAATTATGAAAGACTCGGCTTCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGAGGGGAAACAGCACTaGGGAATAAGGCACCAGAAG +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQEGKQH*GIRHQK
Trigger: CTTCTGGTGCCTTATTCCCAAGTGCTGTTTCCCCTC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACTTGAGGTCAGGAGTTaGAGATCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLEVRS*RSAWPT
Trigger: TGTTGGCCAGGCTGATCTCAAACTCCTGACCTCAAG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACAATCCAGTGAAGTCTaGAGGGTCCCTTCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISQSSEV*RVPSLC
Trigger: ACAGAGGGAAGGGACCCTCAAGACTTCACTGGATTG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS GCA 90 bp CCCTATTGCCAAAAGATTCATGACTCTTTCGCAACTGAGGAGTGCTaGTGGAGGTATTTCGGCCAGACCTCCGATTATTTCCACCAAGAC +
Preference number: 5 (lower is better)
Translates to: PYCQKIHDSFATEEC*WRYFGQTSDYFHQD
Trigger: GTCTTGGTGGAAATAATCGGAGGTCTGGCCGAAATACCTCCAGCAGCACTCCTCAGTTGCGAAAGAGTCATGAATCTTTTGGCAATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS GCA 90 bp CTGCCCTATTGCCAAAAGATTCATGACTCTTTCGCAACTGAGGAGTaGTGCTGGAGGTATTTCGGCCAGACCTCCGATTATTTCCACCAA +
Preference number: 5 (lower is better)
Translates to: LPYCQKIHDSFATEE*CWRYFGQTSDYFHQ
Trigger: TTGGTGGAAATAATCGGAGGTCTGGCCGAAATACCTCCAGCAGCACTCCTCAGTTGCGAAAGAGTCATGAATCTTTTGGCAATAGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATGCAACCTCCACCTCTaGGGTTCAAGCAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISCNLHL*GSSNSP
Trigger: AGGAGAATTGCTTGAACCCAAGAGGTGGAGGTTGCA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGCAGCAAGCAAGGTATaGGGTGCTACTCAATCCAGT +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQAASKV*GATQSS
Trigger: ACTGGATTGAGTAGCACCCAATACCTTGCTTGCTGC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCTGGAAGCATGTTCTTaGAGGGCATCTCCAACATGT +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLEACS*RASPTC
Trigger: ACATGTTGGAGATGCCCTCAAAGAACATGCTTCCAG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAGCATCAAGCATAGCTaGTTCCAAGGATCCAACCAG +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQSIKHS*FQGSNQ
Trigger: CTGGTTGGATCCTTGGAACAAGCTATGCTTGATGCT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGGTAATCTCAGCTACTTaGGAGGCTGAAGCACGAGAA +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQVISAT*EAEARE
Trigger: TTCTCGTGCTTCAGCCTCCAAAGTAGCTGAGATTAC...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS GCA 90 bp TTCAAGAACTGTGAGGATAACATTTGGCCCACCCTCAAATATAAGTaGCACCACAGGGACACCCTGGCCAATCCTAGCATGAATTCTTTG +
Preference number: 5 (lower is better)
Translates to: FKNCEDNIWPTLKYK*HHRDTLANPSMNSL
Trigger: CAAAGAATTCATGCTAGGATTGGCCAGGGTGTCCCTGTGGTGGCACTTATATTTGAGGGTGGGCCAAATGTTATCCTCACAGTTCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACCCAGGACCACAGATTaGAGGGATAACAGAATCATT +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISPRTTD*RDNRII
Trigger: AATGATTCTGTTATCCCTCAAATCTGTGGTCCTGGG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACAGGTACACTGTACTTaGACAGCTCTTCGTAAACCT +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISQVHCT*TALRKP
Trigger: AGGTTTACGAAGAGCTGTCAAAGTACAGTGTACCTG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCATCTCCAACATGTTTaGCCACACCTGTGTTTACTC +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQHLQHV*PHLCLL
Trigger: GAGTAAACACAGGTGTGGCAAAACATGTTGGAGATG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACATCTGATGAGCATCTaGAGATTGTGGGATATGGGA +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISHLMSI*RLWDMG
Trigger: TCCCATATCCCACAATCTCAAGATGCTCATCAGATG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCGAGGGGAAACAGCACTaGGGAATAAGGCACCAGAAG +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITEGKQH*GIRHQK
Trigger: CTTCTGGTGCCTTATTCCCAAGTGCTGTTTCCCCTC...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CCA 90 bp TATTGCCAAAAGATTCATGACTCTTTCGCAACTGAGGAGTGCTGCTaGAGGTATTTCGGCCAGACCTCCGATTATTTCCACCAAGACTAT +
Preference number: 5 (lower is better)
Translates to: YCQKIHDSFATEECC*RYFGQTSDYFHQDY
Trigger: ATAGTCTTGGTGGAAATAATCGGAGGTCTGGCCGAAATACCTCCAGCAGCACTCCTCAGTTGCGAAAGAGTCATGAATCTTTTGGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCATGAGGATAAAGTATaGCCTTTCTGGGAACACCAA +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQHEDKV*PFWEHQ
Trigger: TTGGTGTTCCCAGAAAGGCAATACTTTATCCTCATG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACATGAGGATAAAGTATaGCCTTTCTGGGAACACCAA +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISHEDKV*PFWEHQ
Trigger: TTGGTGTTCCCAGAAAGGCAATACTTTATCCTCATG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAAAACACCTGACGAGTaGCTGACAAATTTGACATCC +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQKTPDE*LTNLTS
Trigger: GGATGTCAAATTTGTCAGCAACTCGTCAGGTGTTTT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAAAACAAGCATGTTGCTaGACCAAGCGACCACAAAAA +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISKQACC*TKRPQK
Trigger: TTTTTGTGGTCGCTTGGTCAAGCAACATGCTTGTTT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCTCCATAAGCATCCGTaGGGCTCTGTTCTGTATGCT +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITLHKHP*GSVLYA
Trigger: AGCATACAGAACAGAGCCCAACGGATGCTTATGGAG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGATGAGCATCTTGAGATaGTGGGATATGGGACATTTC +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQMSILR*WDMGHF
Trigger: GAAATGTCCCATATCCCACAATCTCAAGATGCTCAT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATTTCGCTGTCATCCATaGTCATCTGATGAGCATCTT +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISFRCHP*SSDEHL
Trigger: AAGATGCTCATCAGATGACAATGGATGACAGCGAAA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCAATGGTCATCATGCTaGAGAGTCAATACAGCACAT +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQQWSSC*RVNTAH
Trigger: ATGTGCTGTATTGACTCTCAAGCATGATGACCATTG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACTTAAAAACTCTATTTaGGCACAGAGGCCTAGTTGT +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLKNSI*AQRPSC
Trigger: ACAACTAGGCCTCTGTGCCAAAATAGAGTTTTTAAG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCTTAAAAACTCTATTTaGGCACAGAGGCCTAGTTGT +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLKNSI*AQRPSC
Trigger: ACAACTAGGCCTCTGTGCCAAAATAGAGTTTTTAAG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGCCTCCCATCTCCTCTTaGCTTAAAAACTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQPPISS*LKNSIL
Trigger: CAAAATAGAGTTTTTAAGCAAAGAGGAGATGGGAGG...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTATACACATTCCCTCTaGGTCAAAGTGCTTTCTATC +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQYTHSL*VKVLSI
Trigger: GATAGAAAGCACTTTGACCAAGAGGGAATGTGTATA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATATACACATTCCCTCTaGGTCAAAGTGCTTTCTATC +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISYTHSL*VKVLSI
Trigger: GATAGAAAGCACTTTGACCAAGAGGGAATGTGTATA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAGGAATGAGAACCCCCTaGAAAATTTATGACTCCATA +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISGMRTP*KIYDSI
Trigger: TATGGAGTCATAAATTTTCAAGGGGGTTCTCATTCC...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAGCATCAAGCATAGCTaGTTCCAAGGATCCAACCAG +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITSIKHS*FQGSNQ
Trigger: CTGGTTGGATCCTTGGAACAAGCTATGCTTGATGCT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTTGCTTCATATGCCATaGAACGATAGATCTTACAGG +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLLHMP*NDRSYR
Trigger: CCTGTAAGATCTATCGTTCAATGGCATATGAAGCAA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATTGCTTCATATGCCATaGAACGATAGATCTTACAGG +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLLHMP*NDRSYR
Trigger: CCTGTAAGATCTATCGTTCAATGGCATATGAAGCAA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCAATGGCATTTCTCTGTTaGATGGTCTATCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISMAFLC*MVYLVT
Trigger: GGTTACAAGATAGACCATCAAACAGAGAAATGCCAT...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACTTTGGTTAATGGTATaGTACCACATAAGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLWLMV*YHIRES
Trigger: GCTCTCTCTTATGTGGTACAATACCATTAACCAAAG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CCA 90 bp AACTGCAGCTTTAATAAGACCTTTTCCAAGCAACTGCTTGATTCGTaGGTGAAGCTCAAATTTCTGCATGCCCCCATGTACAGAGATAAC +
Preference number: 5 (lower is better)
Translates to: NCSFNKTFSKQLLDS*VKLKFLHAPMYRDN
Trigger: GTTATCTCTGTACATGGGGGCATGCAGAAATTTGAGCTTCACCCACGAATCAAGCAGTTGCTTGGAAAAGGTCTTATTAAAGCTGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACTGTTAAGAAAAGTTTaGGTCCATCGGAAGTCTTAT +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLLRKV*VHRKSY
Trigger: ATAAGACTTCCGATGGACCAAAACTTTTCTTAACAG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGAAACTTCAAGGAACCTaGGAGAATATGGTATGGATT +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQKLQGT*ENMVWI
Trigger: AATCCATACCATATTCTCCAAGGTTCCTTGAAGTTT...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCCAGTAACTCCCCTCTaGTATATTCGTAAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITPVTPL*YIRKSS
Trigger: ACTGGACTTACGAATATACAAGAGGGGAGTTACTGG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAGTAAAACAAGCATGTaGCTTGACCAAGCGACCACA +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITSKTSM*LDQATT
Trigger: TGTGGTCGCTTGGTCAAGCAACATGCTTGTTTTACT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATTCTTTAAGCAGAAGTaGCAGAATGACTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISFFKQK*QNDFRF
Trigger: AAACCTGAAGTCATTCTGCAACTTCTGCTTAAAGAA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTTCTTTAAGCAGAAGTaGCAGAATGACTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQFFKQK*QNDFRF
Trigger: AAACCTGAAGTCATTCTGCAACTTCTGCTTAAAGAA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATGGATTAGTTGGACCTaGTTTAGTGTTGTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISWISWT*FSVVKF
Trigger: GAACTTTACAACACTAAACAAGGTCCAACTAATCCA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCATCTGATGAGCATCTaGAGATTGTGGGATATGGGA +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITHLMSI*RLWDMG
Trigger: TCCCATATCCCACAATCTCAAGATGCTCATCAGATG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTTGCAAAGTTCCATTTaGCTCCAAATCTTAGTCCAA +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLQSSI*LQILVQ
Trigger: TTGGACTAAGATTTGGAGCAAAATGGAACTTTGCAA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCATTGCAAAGTTCCATTTaGCTCCAAATCTTAGTCCAA +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLQSSI*LQILVQ
Trigger: TTGGACTAAGATTTGGAGCAAAATGGAACTTTGCAA...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCACTTTCAAGATCACCTaGAGGAAGAGAGGAGCTAAG +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITTFKIT*RKRGAK
Trigger: CTTAGCTCCTCTCTTCCTCAAGGTGATCTTGAAAGT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACTGTTATTTAGTATGTaGGGTGAACTCTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISLLFSM*GELSSK
Trigger: TTTGGAAGAGAGTTCACCCAACATACTAAATAACAG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTAGAACAAGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTTATCATCTCTTGCCTaGTCTGTATCTATGAGATAC +
Preference number: 5 (lower is better)
Translates to: LEQVISLPVANKHLVGNQLSSLA*SVSMRY
Trigger: GTATCTCATAGATACAGACAAGGCAAGAGATGATAA...CTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACTTGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp AGTCATTTCCCTTCCCGTGGCCAACAAGCATCTAGTTGGGAACCAGTGATATCACAACAAGGTGAAACCTaGTCTCTACGAAAAATACAA +
Preference number: 5 (lower is better)
Translates to: SHFPSRGQQASSWEPVISQQGET*SLRKIQ
Trigger: TTGTATTTTTCGTAGAGACAAGGTTTCACCTTGTTG...TGATATCACTGGTTCCCAACTAGATGCTTGTTGGCCACGGGAAGGGAAATGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCATCTTCTCCTAGATTaGCTGGGCCAAAAACCATAT +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITHLLLD*LGQKPY
Trigger: ATATGGTTTTTGGCCCAGCAAATCTAGGAGAAGATG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTTTATTGGCATAAGGTaGCACTGCAATCTGCCAGTA +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITFIGIR*HCNLPV
Trigger: TACTGGCAGATTGCAGTGCAACCTTATGCCAATAAA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS TCA 90 bp GGGCTCTGTTCTGTATGCTTTTCCACAGACCATTCTTCTATTGCCTaGTTAAAATGGTCACCCAATTTCACATCTGAGTATTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: GLCSVCFSTDHSSIA*LKWSPNFTSEYFMA
Trigger: TGCCATGAAATACTCAGATGTGAAATTGGGTGACCATTTTAATCAGGCAATAGAAGAATGGTCTGTGGAAAAGCATACAGAACAGAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CCA 90 bp TTCGTAAACCTCCTCCCATCTCCTCTTTGCTTAAAAACTCTATTTTaGCACAGAGGCCTAGTTGTGACCAAGAAGACATGCTGTTATTTA +
Preference number: 5 (lower is better)
Translates to: FVNLLPSPLCLKTLF*HRGLVVTKKTCCYL
Trigger: TAAATAACAGCATGTCTTCTTGGTCACAACTAGGCCTCTGTGCCAAAATAGAGTTTTTAAGCAAAGAGGAGATGGGAGGAGGTTTACGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000558444.5
ENST00000560955.5
ENST00000561443.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCCCAGGACCACAGATTaGAGGGATAACAGAATCATT +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSPRTTD*RDNRII
Trigger: AATGATTCTGTTATCCCTCAAATCTGTGGTCCTGGG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCAGGTACACTGTACTTaGACAGCTCTTCGTAAACCT +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSQVHCT*TALRKP
Trigger: AGGTTTACGAAGAGCTGTCAAAGTACAGTGTACCTG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCCAGTAACTCCCCTCTaGTATATTCGTAAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSPVTPL*YIRKSS
Trigger: ACTGGACTTACGAATATACAAGAGGGGAGTTACTGG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCAGGCACTGAGGATTGCTaGAAGTCAGTTCAAGACCAG +
Preference number: 5 (lower is better)
Translates to: FPNRNETFNVLLLSSPESGTEDC*KSVQDQ
Trigger: CTGGTCTTGAACTGACTTCAAGCAATCCTCAGTGCC...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAGTAAAACAAGCATGTaGCTTGACCAAGCGACCACA +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSSKTSM*LDQATT
Trigger: TGTGGTCGCTTGGTCAAGCAACATGCTTGTTTTACT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCACAGAGATAACAAGTTaGGGTAACTCCATTTGCCAT +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITTEITS*GNSICH
Trigger: ATGGCAAATGGAGTTACCCAAACTTGTTATCTCTGT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTACTTTCAAGATCACCTaGAGGAAGAGAGGAGCTAAG +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSTFKIT*RKRGAK
Trigger: CTTAGCTCCTCTCTTCCTCAAGGTGATCTTGAAAGT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTACCTCTCTAGCACCTaGACTTTCAAATCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITYLSST*TFKSAK
Trigger: TTTTGCAGATTTGAAAGTCAAGGTGCTAGAGAGGTA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS GCA 90 bp AAAACTCTATTTTGGCACAGAGGCCTAGTTGTGACCAAGAAGACATaGTGTTATTTAGTATGTTGGGTGAACTCTCTTCCAAACGATACA +
Preference number: 5 (lower is better)
Translates to: KTLFWHRGLVVTKKT*CYLVCWVNSLPNDT
Trigger: TGTATCGTTTGGAAGAGAGTTCACCCAACATACTAAATAACAGCATGTCTTCTTGGTCACAACTAGGCCTCTGTGCCAAAATAGAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000558444.5
ENST00000560849.2
ENST00000560955.5
ENST00000561443.5
ENST00000646667.1
CDS CCA 90 bp AGGAAGATTTCCCTGTTTGACGTCTCGAACAAGATGAAACAGCATTaGATTAGTTGGACCTTGTTTAGTGTTGTAAAGTTCTTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: RKISLFDVSNKMKQH*ISWTLFSVVKFFQS
Trigger: AGACTGGAAGAACTTTACAACACTAAACAAGGTCCAACTAATCCAATGCTGTTTCATCTTGTTCGAGACGTCAAACAGGGAAATCTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCAAACTTCAAGGAACCTaGGAGAATATGGTATGGATT +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITKLQGT*ENMVWI
Trigger: AATCCATACCATATTCTCCAAGGTTCCTTGAAGTTT...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTTGTGCTGCTCTCTGTaGTTGAATTTCTCTCAGACA +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSLCCSL*LNFSQT
Trigger: TGTCTGAGAGAAATTCAACAACAGAGAGCAGCACAA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAAAACACCTGACGAGTaGCTGACAAATTTGACATCC +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSKTPDE*LTNLTS
Trigger: GGATGTCAAATTTGTCAGCAACTCGTCAGGTGTTTT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTAAACAAGCATGTTGCTaGACCAAGCGACCACAAAAA +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSKQACC*TKRPQK
Trigger: TTTTTGTGGTCGCTTGGTCAAGCAACATGCTTGTTT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTTCAAAACATTCAATTaGCTCAGGGGGTTCAATAAG +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITFKTFN*LRGFNK
Trigger: CTTATTGAACCCCCTGAGCAAATTGAATGTTTTGAA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCTGGATTAGTTGGACCTaGTTTAGTGTTGTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITWISWT*FSVVKF
Trigger: GAACTTTACAACACTAAACAAGGTCCAACTAATCCA...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTATGAGCATCTTGAGATaGTGGGATATGGGACATTTC +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSMSILR*WDMGHF
Trigger: GAAATGTCCCATATCCCACAATCTCAAGATGCTCAT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTTTCGCTGTCATCCATaGTCATCTGATGAGCATCTT +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSFRCHP*SSDEHL
Trigger: AAGATGCTCATCAGATGACAATGGATGACAGCGAAA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATGGACACCTACCTTTGGTTAATGGTATTGTACCACATAAGAGAGAGCATCACCCTGTTATTTAGTATGTaGGGTGAACTCTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: MDTYLWLMVLYHIRESITLLFSM*GELSSK
Trigger: TTTGGAAGAGAGTTCACCCAACATACTAAATAACAG...GGTGATGCTCTCTCTTATGTGGTACAATACCATTAACCAAAGGTAGGTGTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCATGGACACCTACCTTaGGTTAATGGTATTGTACCA +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSHGHLP*VNGIVP
Trigger: TGGTACAATACCATTAACCAAAGGTAGGTGTCCATG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTTTTATTGGCATAAGGTaGCACTGCAATCTGCCAGTA +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSFIGIR*HCNLPV
Trigger: TACTGGCAGATTGCAGTGCAACCTTATGCCAATAAA...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS TCA 90 bp TTGTATCACTGGTTCAAACTGAAGTGTACCTATCTCTGTGGTACGTaGAGATTTTCAAGAAGTACAGAGACACAGACAGATTTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: LYHWFKLKCTYLCGT*RFSRSTETQTDLGN
Trigger: ATTCCCTAAATCTGTCTGTGTCTCTGTACTTCTTGAAAATCTTCACGTACCACAGAGATAGGTACACTTCAGTTTGAACCAGTGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560284.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTCCTCCCATCTCCTCTTaGCTTAAAAACTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSPPISS*LKNSIL
Trigger: CAAAATAGAGTTTTTAAGCAAAGAGGAGATGGGAGG...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCACAGGTACACTGTACTTaGACAGCTCTTCGTAAACCT +
Preference number: 5 (lower is better)
Translates to: FPNRNETFNVLLLSSPESQVHCT*TALRKP
Trigger: AGGTTTACGAAGAGCTGTCAAAGTACAGTGTACCTG...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CAA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCACCAGTAACTCCCCTCTaGTATATTCGTAAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: FPNRNETFNVLLLSSPESPVTPL*YIRKSS
Trigger: ACTGGACTTACGAATATACAAGAGGGGAGTTACTGG...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTGGAATGAGAACCCCCTaGAAAATTTATGACTCCATA +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSGMRTP*KIYDSI
Trigger: TATGGAGTCATAAATTTTCAAGGGGGTTCTCATTCC...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTACAGAGATAACAAGTTaGGGTAACTCCATTTGCCAT +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSTEITS*GNSICH
Trigger: ATGGCAAATGGAGTTACCCAAACTTGTTATCTCTGT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp GTGATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATACATCTGATGAGCATCTaGAGATTGTGGGATATGGGA +
Preference number: 5 (lower is better)
Translates to: VICLHLLKFPRMNRNFRIHLMSI*RLWDMG
Trigger: TCCCATATCCCACAATCTCAAGATGCTCATCAGATG...TATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CAA 90 bp ATTGACCTTTTAACTGTGCTGGAGTCAGCAAATTCAACTTGCATACACCTTTCTATGGCATTTCTCTGTTaGATGGTCTATCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: IDLLTVLESANSTCIHLSMAFLC*MVYLVT
Trigger: GGTTACAAGATAGACCATCAAACAGAGAAATGCCAT...AGAAAGGTGTATGCAAGTTGAATTTGCTGACTCCAGCACAGTTAAAAGGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATGGGTATAGGGGATaGGGATTGAGCATGAGAAAC +
Preference number: 5 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRNGYRG*GLSMRN
Trigger: GTTTCTCATGCTCAATCCCAATCCCCTATACCCATT...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS TCA 90 bp CCATTCTTCTATTGCCTGATTAAAATGGTCACCCAATTTCACATCTaGGTATTTCATGGCAAGACTTGCAGTAAAACAAGCATGTTGCTT +
Preference number: 5 (lower is better)
Translates to: PFFYCLIKMVTQFHI*VFHGKTCSKTSMLL
Trigger: AAGCAACATGCTTGTTTTACTGCAAGTCTTGCCATGAAATACTCAGATGTGAAATTGGGTGACCATTTTAATCAGGCAATAGAAGAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS TCA 90 bp TTTTTCCATACAGAAGGTCTTACAGGACCATCATCAATAAGGTTTTaGGCCAAGTGTTTGGAAATGCTCAGTTCTCGTGTGATTTCATTA +
Preference number: 5 (lower is better)
Translates to: FFHTEGLTGPSSIRF*AKCLEMLSSRVISL
Trigger: TAATGAAATCACACGAGAACTGAGCATTTCCAAACACTTGGCTCAAAACCTTATTGATGATGGTCCTGTAAGACCTTCTGTATGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS GCA 90 bp TCCATAAACAAATACATGATTTTTGGCAATGTCAACTCTATCCCATaGCAATGTAAGGATAAGCTGGTCAAATGCAGATGCATTAGTACC +
Preference number: 5 (lower is better)
Translates to: SINKYMIFGNVNSIP*QCKDKLVKCRCIST
Trigger: GGTACTAATGCATCTGCATTTGACCAGCTTATCCTTACATTGGCATGGGATAGAGTTGACATTGCCAAAAATCATGTATTTGTTTATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CCA 90 bp CAGAGAAACTATATGGCTAAGAATGATAAGTGGAGGAGGCAGAACTaGTTTCTCATGATAAGCCATAATAAAATGATAACGCTGGTACTT +
Preference number: 5 (lower is better)
Translates to: QRNYMAKNDKWRRQN*FLMISHNKMITLVL
Trigger: AAGTACCAGCGTTATCATTTTATTATGGCTTATCATGAGAAACCAGTTCTGCCTCCTCCACTTATCATTCTTAGCCATATAGTTTCTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560284.1
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCATTGTGCTGCTCTCTGTaGTTGAATTTCTCTCAGACA +
Preference number: 5 (lower is better)
Translates to: FPNRNETFNVLLLSSPESLCCSL*LNFSQT
Trigger: TGTCTGAGAGAAATTCAACAACAGAGAGCAGCACAA...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CAA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCACATCTTCTCCTAGATTaGCTGGGCCAAAAACCATAT +
Preference number: 5 (lower is better)
Translates to: FPNRNETFNVLLLSSPESHLLLD*LGQKPY
Trigger: ATATGGTTTTTGGCCCAGCAAATCTAGGAGAAGATG...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CAA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGATGAGCATCTTGAGATaGTGGGATATGGGACATTTC +
Preference number: 5 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRMSILR*WDMGHF
Trigger: GAAATGTCCCATATCCCACAATCTCAAGATGCTCAT...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CAA 90 bp ATTTGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGTTTCGCTGTCATCCATaGTCATCTGATGAGCATCTT +
Preference number: 5 (lower is better)
Translates to: ICLHLLKFPRMNRNFRIRFRCHP*SSDEHL
Trigger: AAGATGCTCATCAGATGACAATGGATGACAGCGAAA...CCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CAA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATTTGCTTCATATGCCATaGAACGATAGATCTTACAGG +
Preference number: 5 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNLLHMP*NDRSYR
Trigger: CCTGTAAGATCTATCGTTCAATGGCATATGAAGCAA...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CAA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATGTGATTTGTCTGCATTaGCTGAAATTTCCTAGGATG +
Preference number: 5 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNVICLH*LKFPRM
Trigger: CATCCTAGGAAATTTCAGCAAATGCAGACAAATCAC...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS TCA 90 bp ATGGGCATCTTTATCTACATAATGAATTGTATCACTGGTTCAAACTaGAGTGTACCTATCTCTGTGGTACGTGAAGATTTTCAAGAAGTA +
Preference number: 5 (lower is better)
Translates to: MGIFIYIMNCITGSN*SVPISVVREDFQEV
Trigger: TACTTCTTGAAAATCTTCACGTACCACAGAGATAGGTACACTTCAGTTTGAACCAGTGATACAATTCATTATGTAGATAAAGATGCCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560284.1
CDS TCA 90 bp TTAGTACCTTTTAGCAGTGCAGTAAGTATTGCTACATCTATATCTTaGTGTTCATCTGACCCAATATGGAAAACAGTGATAAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LVPFSSAVSIATSIS*CSSDPIWKTVISSF
Trigger: AAAGGAGCTTATCACTGTTTTCCATATTGGGTCAGATGAACATCAAGATATAGATGTAGCAATACTTACTGCACTGCTAAAAGGTACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS-3UTR CAA 90 bp TTCCCAAATAGAAACGAAACCTTTAATGTGCTTTTACTATCTTCCCCTGAATCAAAACTTCAAGGAACCTaGGAGAATATGGTATGGATT +
Preference number: 5 (lower is better)
Translates to: FPNRNETFNVLLLSSPESKLQGT*ENMVWI
Trigger: AATCCATACCATATTCTCCAAGGTTCCTTGAAGTTT...TGATTCAGGGGAAGATAGTAAAAGCACATTAAAGGTTTCGTTTCTATTTGGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561267.5
CDS-3UTR CAA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATTGGATTAGTTGGACCTaGTTTAGTGTTGTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNWISWT*FSVVKF
Trigger: GAACTTTACAACACTAAACAAGGTCCAACTAATCCA...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS-3UTR CAA 90 bp TGTCTGCATTTGCTGAAATTTCCTAGGATGAACAGGAATTTCAGAATAAGGAATTTGCAAAGTTCCATTTaGCTCCAAATCTTAGTCCAA +
Preference number: 5 (lower is better)
Translates to: CLHLLKFPRMNRNFRIRNLQSSI*LQILVQ
Trigger: TTGGACTAAGATTTGGAGCAAAATGGAACTTTGCAA...ATTCCTTATTCTGAAATTCCTGTTCATCCTAGGAAATTTCAGCAAATGCAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560638.1
CDS TCA 72 bp CGAGTCTTTCATAATTGTGCGACCAACTCCTCCGGGTaGCTGGCCACAGGGACGCGCCCGCGCCCGCCTCCG +
Preference number: 6 (lower is better)
Translates to: RVFHNCATNSSG*LATGTRPRPPP
Trigger: CGGAGGCGGGCGCGGGCGCGTCCCTGTGGCCAGTCACCCGGAGGAGTTGGTCGCACAATTATGAAAGACTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646667.1
CDS CAA 72 bp GTAGTCTCTGTCGCAGTTCTGGAGGGGAAACAGCACTaGGGAATAAGGCACCAGAAGAGGAACCAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: VVSVAVLEGKQH*GIRHQKRNQPL
Trigger: CAGAGGCTGGTTCCTCTTCTGGTGCCTTATTCCCAAGTGCTGTTTCCCCTCCAGAACTGCGACAGAGACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS GCA 72 bp TGTGAGGATAACATTTGGCCCACCCTCAAATATAAGTaGCACCACAGGGACACCCTGGCCAATCCTAGCATG +
Preference number: 6 (lower is better)
Translates to: CEDNIWPTLKYK*HHRDTLANPSM
Trigger: CATGCTAGGATTGGCCAGGGTGTCCCTGTGGTGGCACTTATATTTGAGGGTGGGCCAAATGTTATCCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CAA 72 bp GCGACCACAAAAACACCTGACGAGTTGCTGACAAATTaGACATCCTGGAAGGCATCTGTGAGGGTCCTTGGA +
Preference number: 6 (lower is better)
Translates to: ATTKTPDELLTN*TSWKASVRVLG
Trigger: TCCAAGGACCCTCACAGATGCCTTCCAGGATGTCAAATTTGTCAGCAACTCGTCAGGTGTTTTTGTGGTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS GCA 72 bp TGCCAAAAGATTCATGACTCTTTCGCAACTGAGGAGTaGTGCTGGAGGTATTTCGGCCAGACCTCCGATTAT +
Preference number: 6 (lower is better)
Translates to: CQKIHDSFATEE*CWRYFGQTSDY
Trigger: ATAATCGGAGGTCTGGCCGAAATACCTCCAGCAGCACTCCTCAGTTGCGAAAGAGTCATGAATCTTTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS CCA 72 bp AAGATTCATGACTCTTTCGCAACTGAGGAGTGCTGCTaGAGGTATTTCGGCCAGACCTCCGATTATTTCCAC +
Preference number: 6 (lower is better)
Translates to: KIHDSFATEECC*RYFGQTSDYFH
Trigger: GTGGAAATAATCGGAGGTCTGGCCGAAATACCTCCAGCAGCACTCCTCAGTTGCGAAAGAGTCATGAATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS CAA 90 bp CAGAGGCCTAGTTGTGACCAAGAAGACATGCTGTTATTTAGTATGTaGGGTGAACTCTCTTCCAAACGATACACTGTGACAGGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: QRPSCDQEDMLLFSM*GELSSKRYTVTGSP
Trigger: AGGGGAGCCTGTCACAGTGTATCGTTTGGAAGAGAGTTCACCCAACATACTAAATAACAGCATGTCTTCTTGGTCACAACTAGGCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000558444.5
ENST00000560849.2
ENST00000560955.5
ENST00000561443.5
ENST00000646667.1
CDS GCA 72 bp CAAAAGATTCATGACTCTTTCGCAACTGAGGAGTGCTaGTGGAGGTATTTCGGCCAGACCTCCGATTATTTC +
Preference number: 6 (lower is better)
Translates to: QKIHDSFATEEC*WRYFGQTSDYF
Trigger: GAAATAATCGGAGGTCTGGCCGAAATACCTCCAGCAGCACTCCTCAGTTGCGAAAGAGTCATGAATCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS GCA 72 bp TTTGTTTATGAATATACGCTAGCAGATCTGCAGCTCTaGCTGTTCCTTCACACACAACTACTGGAACAGGGG +
Preference number: 6 (lower is better)
Translates to: FVYEYTLADLQL*LFLHTQLLEQG
Trigger: CCCCTGTTCCAGTAGTTGTGTGTGAAGGAACAGGCAGAGCTGCAGATCTGCTAGCGTATATTCATAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CAA 72 bp TTGAGGATATCATGTTCTGACCAGGTACACTGTACTTaGACAGCTCTTCGTAAACCTCCTCCCATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: LRISCSDQVHCT*TALRKPPPISS
Trigger: AGAGGAGATGGGAGGAGGTTTACGAAGAGCTGTCAAAGTACAGTGTACCTGGTCAGAACATGATATCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000560516.1
ENST00000560955.5
ENST00000561443.5
ENST00000646667.1
CDS CAA 72 bp TTCATGGCAAGACTTGCAGTAAAACAAGCATGTTGCTaGACCAAGCGACCACAAAAACACCTGACGAGTTGC +
Preference number: 6 (lower is better)
Translates to: FMARLAVKQACC*TKRPQKHLTSC
Trigger: GCAACTCGTCAGGTGTTTTTGTGGTCGCTTGGTCAAGCAACATGCTTGTTTTACTGCAAGTCTTGCCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CAA 72 bp TGCAACTCTATCCATTACAAGAGCATCAAGCATAGCTaGTTCCAAGGATCCAACCAGCCACTGCTGTCCATA +
Preference number: 6 (lower is better)
Translates to: CNSIHYKSIKHS*FQGSNQPLLSI
Trigger: TATGGACAGCAGTGGCTGGTTGGATCCTTGGAACAAGCTATGCTTGATGCTCTTGTAATGGATAGAGTTGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CAA 90 bp CACTGTACTTTGACAGCTCTTCGTAAACCTCCTCCCATCTCCTCTTaGCTTAAAAACTCTATTTTGGCACAGAGGCCTAGTTGTGACCAA +
Preference number: 6 (lower is better)
Translates to: HCTLTALRKPPPISS*LKNSILAQRPSCDQ
Trigger: TTGGTCACAACTAGGCCTCTGTGCCAAAATAGAGTTTTTAAGCAAAGAGGAGATGGGAGGAGGTTTACGAAGAGCTGTCAAAGTACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000558444.5
ENST00000560516.1
ENST00000560955.5
ENST00000561443.5
ENST00000646667.1
CDS TCA 72 bp TGCAAATCTTTCGAGATGATCTGGAAGCATGTTCTTTaGGGGCATCTCCAACATGTTTTGCCACACCTGTGT +
Preference number: 6 (lower is better)
Translates to: CKSFEMIWKHVL*GHLQHVLPHLC
Trigger: ACACAGGTGTGGCAAAACATGTTGGAGATGCCCTCAAAGAACATGCTTCCAGATCATCTCGAAAGATTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS TCA 72 bp GCATCAGGAAGATTCCCTCCTTCTTCTGTTTGTTTATaGATATACGCTAGCAGATCTGCAGCTCTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: ASGRFPPSSVCL*IYASRSAALPV
Trigger: AACAGGCAGAGCTGCAGATCTGCTAGCGTATATTCATAAACAAACAGAAGAAGGAGGGAATCTTCCTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CAA 72 bp CCTCACATACTTAGCTCTGTAGGAATGAGAACCCCCTaGAAAATTTATGACTCCATAAGCATCCGTTGGGCT +
Preference number: 6 (lower is better)
Translates to: PHILSSVGMRTP*KIYDSISIRWA
Trigger: AGCCCAACGGATGCTTATGGAGTCATAAATTTTCAAGGGGGTTCTCATTCCTACAGAGCTAAGTATGTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CAA 90 bp ATTCCGATAGTGCAAATCTTTCGAGATGATCTGGAAGCATGTTCTTaGAGGGCATCTCCAACATGTTTTGCCACACCTGTGTTTACTCCT +
Preference number: 6 (lower is better)
Translates to: IPIVQIFRDDLEACS*RASPTCFATPVFTP
Trigger: AGGAGTAAACACAGGTGTGGCAAAACATGTTGGAGATGCCCTCAAAGAACATGCTTCCAGATCATCTCGAAAGATTTGCACTATCGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS TCA 72 bp GGAGGAAGATTTCCCTGTTTGACGTCTCGAACAAGATaGAACAGCATTGGATTAGTTGGACCTTGTTTAGTG +
Preference number: 6 (lower is better)
Translates to: GGRFPCLTSRTR*NSIGLVGPCLV
Trigger: CACTAAACAAGGTCCAACTAATCCAATGCTGTTTCATCTTGTTCGAGACGTCAAACAGGGAAATCTTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS TCA 72 bp ACAGAAGGTCTTACAGGACCATCATCAATAAGGTTTTaGGCCAAGTGTTTGGAAATGCTCAGTTCTCGTGTG +
Preference number: 6 (lower is better)
Translates to: TEGLTGPSSIRF*AKCLEMLSSRV
Trigger: CACACGAGAACTGAGCATTTCCAAACACTTGGCTCAAAACCTTATTGATGATGGTCCTGTAAGACCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CAA 90 bp CTTCGTAAACCTCCTCCCATCTCCTCTTTGCTTAAAAACTCTATTTaGGCACAGAGGCCTAGTTGTGACCAAGAAGACATGCTGTTATTT +
Preference number: 6 (lower is better)
Translates to: LRKPPPISSLLKNSI*AQRPSCDQEDMLLF
Trigger: AAATAACAGCATGTCTTCTTGGTCACAACTAGGCCTCTGTGCCAAAATAGAGTTTTTAAGCAAAGAGGAGATGGGAGGAGGTTTACGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558444.5
ENST00000560955.5
ENST00000561443.5
ENST00000646667.1
CDS CAA 90 bp CTGAAAGTTGTTTTCGCTGTCATCCATTGTCATCTGATGAGCATCTaGAGATTGTGGGATATGGGACATTTCAGCCTTAGTTTTATACTC +
Preference number: 6 (lower is better)
Translates to: LKVVFAVIHCHLMSI*RLWDMGHFSLSFIL
Trigger: GAGTATAAAACTAAGGCTGAAATGTCCCATATCCCACAATCTCAAGATGCTCATCAGATGACAATGGATGACAGCGAAAACAACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS CAA 90 bp GGATCTCTTCTGTTATGTTCTGAAAGTTGTTTTCGCTGTCATCCATaGTCATCTGATGAGCATCTTGAGATTGTGGGATATGGGACATTT +
Preference number: 6 (lower is better)
Translates to: GSLLLCSESCFRCHP*SSDEHLEIVGYGTF
Trigger: AAATGTCCCATATCCCACAATCTCAAGATGCTCATCAGATGACAATGGATGACAGCGAAAACAACTTTCAGAACATAACAGAAGAGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS TCA 72 bp TGGTTCAAACTGAAGTGTACCTATCTCTGTGGTACGTaGAGATTTTCAAGAAGTACAGAGACACAGACAGAT +
Preference number: 6 (lower is better)
Translates to: WFKLKCTYLCGT*RFSRSTETQTD
Trigger: ATCTGTCTGTGTCTCTGTACTTCTTGAAAATCTTCACGTACCACAGAGATAGGTACACTTCAGTTTGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560284.1
CDS TCA 72 bp CAATCCGGTATTAAAGCTGCTTTGGAATCTACTTCATaGGTGTCTTCGGTAGATGGCCTTCTACTGATTTTT +
Preference number: 6 (lower is better)
Translates to: QSGIKAALESTS*VSSVDGLLLIF
Trigger: AAAAATCAGTAGAAGGCCATCTACCGAAGACACTCATGAAGTAGATTCCAAAGCAGCTTTAATACCGGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000560849.2
ENST00000560955.5
ENST00000646667.1
CDS TCA 72 bp CAAACCGGTATTAAAGCTGCTTTGGAATCTACTTCATaGGTGTCTTCGGTAGATGGCCTTCTACTGATTTTT +
Preference number: 6 (lower is better)
Translates to: QTGIKAALESTS*VSSVDGLLLIF
Trigger: AAAAATCAGTAGAAGGCCATCTACCGAAGACACTCATGAAGTAGATTCCAAAGCAGCTTTAATACCGGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645282.1
CDS CCA 72 bp AACAAGTCCTATATCAATCAGAGTGATCTTATATCCTaGAGGAAGATTTCCCTGTTTGACGTCTCGAACAAG +
Preference number: 6 (lower is better)
Translates to: NKSYINQSDLIS*RKISLFDVSNK
Trigger: CTTGTTCGAGACGTCAAACAGGGAAATCTTCCTCCAGGATATAAGATCACTCTGATTGATATAGGACTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS CCA 72 bp GTCATCCATTGTCATCTGATGAGCATCTTGAGATTGTaGGATATGGGACATTTCAGCCTTAGTTTTATACTC +
Preference number: 6 (lower is better)
Translates to: VIHCHLMSILRL*DMGHFSLSFIL
Trigger: GAGTATAAAACTAAGGCTGAAATGTCCCATATCCCACAATCTCAAGATGCTCATCAGATGACAATGGATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS CAA 72 bp CATTCTTTAAGCAGAAGTTGCAGAATGACTTCAGGTTaGGTGTCATATGATAGCCTCACATACTTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: HSLSRSCRMTSG*VSYDSLTYLAL
Trigger: CAGAGCTAAGTATGTGAGGCTATCATATGACACCAAACCTGAAGTCATTCTGCAACTTCTGCTTAAAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CAA 72 bp GCTGTCATCCATTGTCATCTGATGAGCATCTTGAGATaGTGGGATATGGGACATTTCAGCCTTAGTTTTATA +
Preference number: 6 (lower is better)
Translates to: AVIHCHLMSILR*WDMGHFSLSFI
Trigger: TATAAAACTAAGGCTGAAATGTCCCATATCCCACAATCTCAAGATGCTCATCAGATGACAATGGATGACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS CAA 90 bp CTTTTTCCATACAGAAGGTCTTACAGGACCATCATCAATAAGGTTTaGAGCCAAGTGTTTGGAAATGCTCAGTTCTCGTGTGATTTCATT +
Preference number: 6 (lower is better)
Translates to: LFPYRRSYRTIINKV*SQVFGNAQFSCDFI
Trigger: AATGAAATCACACGAGAACTGAGCATTTCCAAACACTTGGCTCAAAACCTTATTGATGATGGTCCTGTAAGACCTTCTGTATGGAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS GCA 72 bp AAATACATGATTTTTGGCAATGTCAACTCTATCCCATaGCAATGTAAGGATAAGCTGGTCAAATGCAGATGC +
Preference number: 6 (lower is better)
Translates to: KYMIFGNVNSIP*QCKDKLVKCRC
Trigger: GCATCTGCATTTGACCAGCTTATCCTTACATTGGCATGGGATAGAGTTGACATTGCCAAAAATCATGTATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CAA 72 bp GAACCTTGGAGAATATGGTATGGATTTGGGTTTCATTaGATTAAAGGCAAACGTAAGCTTTTGTGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: EPWRIWYGFGFH*IKGKRKLLCCS
Trigger: AGAGCAGCACAAAAGCTTACGTTTGCCTTTAATCAAATGAAACCCAAATCCATACCATATTCTCCAAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000560516.1
ENST00000560955.5
ENST00000561267.5
ENST00000561443.5
ENST00000646667.1
CDS CAA 72 bp CTGTTATGTTCTGAAAGTTGTTTTCGCTGTCATCCATaGTCATCTGATGAGCATCTTGAGATTGTGGGATAT +
Preference number: 6 (lower is better)
Translates to: LLCSESCFRCHP*SSDEHLEIVGY
Trigger: ATATCCCACAATCTCAAGATGCTCATCAGATGACAATGGATGACAGCGAAAACAACTTTCAGAACATAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS TCA 72 bp TATTGCCTGATTAAAATGGTCACCCAATTTCACATCTaGGTATTTCATGGCAAGACTTGCAGTAAAACAAGC +
Preference number: 6 (lower is better)
Translates to: YCLIKMVTQFHI*VFHGKTCSKTS
Trigger: GCTTGTTTTACTGCAAGTCTTGCCATGAAATACTCAGATGTGAAATTGGGTGACCATTTTAATCAGGCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS TCA 72 bp TCTGTATGCTTTTCCACAGACCATTCTTCTATTGCCTaGTTAAAATGGTCACCCAATTTCACATCTGAGTAT +
Preference number: 6 (lower is better)
Translates to: SVCFSTDHSSIA*LKWSPNFTSEY
Trigger: ATACTCAGATGTGAAATTGGGTGACCATTTTAATCAGGCAATAGAAGAATGGTCTGTGGAAAAGCATACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS TCA 72 bp ATCCACATATCAGATAACAACATTTGTGTACAGGTGTaGGCTACAAAAGGTCTAAGTCTTGAAGAAACTGCT +
Preference number: 6 (lower is better)
Translates to: IHISDNNICVQV*ATKGLSLEETA
Trigger: AGCAGTTTCTTCAAGACTTAGACCTTTTGTAGCTCACACCTGTACACAAATGTTGTTATCTGATATGTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS TCA 72 bp AGTAAGTATTGCTACATCTATATCTTGATGTTCATCTaGCCCAATATGGAAAACAGTGATAAGCTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: SKYCYIYILMFI*PNMENSDKLLS
Trigger: AGAAAGGAGCTTATCACTGTTTTCCATATTGGGTCAGATGAACATCAAGATATAGATGTAGCAATACTTACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS TCA 72 bp TTTAGCAGTGCAGTAAGTATTGCTACATCTATATCTTaGTGTTCATCTGACCCAATATGGAAAACAGTGATA +
Preference number: 6 (lower is better)
Translates to: FSSAVSIATSIS*CSSDPIWKTVI
Trigger: TATCACTGTTTTCCATATTGGGTCAGATGAACATCAAGATATAGATGTAGCAATACTTACTGCACTGCTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1
CDS CAA 72 bp ATCTTCCAGCCACAAAAACATGATTATCATATGCATTaGCAAAGTTCCATTTTGCTCCAAATCTTAGTCCAA +
Preference number: 6 (lower is better)
Translates to: IFQPQKHDYHMH*QSSILLQILVQ
Trigger: TTGGACTAAGATTTGGAGCAAAATGGAACTTTGCAAATGCATATGATAATCATGTTTTTGTGGCTGGAAGAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000560638.1
ENST00000560955.5
ENST00000646667.1
CDS CAA 72 bp ATTACAATGAAAAGGATTATTACTTTCAAGATCACCTaGAGGAAGAGAGGAGCTAAGTGTATTTACAACACC +
Preference number: 6 (lower is better)
Translates to: ITMKRIITFKIT*RKRGAKCIYNT
Trigger: GGTGTTGTAAATACACTTAGCTCCTCTCTTCCTCAAGGTGATCTTGAAAGTAATAATCCTTTTCATTGTAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560955.5
ENST00000646667.1