RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000083067

Ensembl transcript IDs: ENST00000354500.6, ENST00000357533.6, ENST00000358082.7, ENST00000360823.6, ENST00000361823.9, ENST00000377097.3, ENST00000377101.5, ENST00000377105.5, ENST00000377110.9, ENST00000377111.8, ENST00000396280.9, ENST00000396283.5, ENST00000396285.5, ENST00000396292.8, ENST00000408909.6, ENST00000437699.3, ENST00000677594.1, ENST00000677713.2

Found 1927 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGGAAGCTGGGGTAGGACACTGCAGATGCTGAGCTTCCAATGCTaGCCCCTGGAACCCTGCCTCTCAGCTGAGAGGACCGTCATTCGC +
Preference number: 1 (lower is better)
Translates to: EGSWGRTLQMLSFQC*PLEPCLSAERTVIR
Trigger: GCGAATGACGGTCCTCTCAGCTGAGAGGCAGGGTTCCAGGGGCCAGCATTGGAAGCTCAGCATCTGCAGTGTCCTACCCCAGCTTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR GCA 90 bp GTCGAAGGAAGCTGGGGTAGGACACTGCAGATGCTGAGCTTCCAATaGTGGCCCCTGGAACCCTGCCTCTCAGCTGAGAGGACCGTCATT +
Preference number: 1 (lower is better)
Translates to: VEGSWGRTLQMLSFQ*WPLEPCLSAERTVI
Trigger: AATGACGGTCCTCTCAGCTGAGAGGCAGGGTTCCAGGGGCCAGCATTGGAAGCTCAGCATCTGCAGTGTCCTACCCCAGCTTCCTTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR GCA 90 bp AGGACACTGCAGATGCTGAGCTTCCAATGCTGGCCCCTGGAACCCTaGCTCTCAGCTGAGAGGACCGTCATTCGCCATCAACTAGCACCA +
Preference number: 1 (lower is better)
Translates to: RTLQMLSFQCWPLEP*LSAERTVIRHQLAP
Trigger: TGGTGCTAGTTGATGGCGAATGACGGTCCTCTCAGCTGAGAGGCAGGGTTCCAGGGGCCAGCATTGGAAGCTCAGCATCTGCAGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR TCA 90 bp CCAACTGTAAAGTCGAAGGAAGCTGGGGTAGGACACTGCAGATGCTaGGCTTCCAATGCTGGCCCCTGGAACCCTGCCTCTCAGCTGAGA +
Preference number: 1 (lower is better)
Translates to: PTVKSKEAGVGHCRC*ASNAGPWNPASQLR
Trigger: TCTCAGCTGAGAGGCAGGGTTCCAGGGGCCAGCATTGGAAGCTCAGCATCTGCAGTGTCCTACCCCAGCTTCCTTCGACTTTACAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR GCA 90 bp AGAAAGAAAGCCGCACATCCAGGCACAAGGCTGAATTTCCCCCTTTaGCCCATAGGCCTCAGCCACCTGTCTCCTCCAGAGGAAGGCATG +
Preference number: 1 (lower is better)
Translates to: RKKAAHPGTRLNFPL*PIGLSHLSPPEEGM
Trigger: CATGCCTTCCTCTGGAGGAGACAGGTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGCGGCTTTCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 90 bp GTTTCACAAAGAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTaGCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGG +
Preference number: 1 (lower is better)
Translates to: VSQRSPRNFEEELHS*LRAAFVGESQAERR
Trigger: CCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTCTTTGTGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR GCA 90 bp GGAGCGTGCTCGAAGCCCCTTGTTTCCCCTGCTCTCATGGCTTTCTaGTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCC +
Preference number: 1 (lower is better)
Translates to: GACSKPLVSPALMAF*CDCGYTFISNPSFS
Trigger: GGAGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGAGAGCAGGGGAAACAAGGGGCTTCGAGCACGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR CCA 90 bp CCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCCTGCTCTCATaGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTT +
Preference number: 1 (lower is better)
Translates to: PGMERARSPLFPLLS*LSAVTADTHSSLTL
Trigger: AAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGAGAGCAGGGGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp CCCCTCGATCAGGGATGTGGTGGAATCAATGGGCTGAGCATAAGCTaGCTGCACAAGGCCACAGAATCAATGCCACATTGCTGCACAGAG +
Preference number: 1 (lower is better)
Translates to: PLDQGCGGINGLSIS*LHKATESMPHCCTE
Trigger: CTCTGTGCAGCAATGTGGCATTGATTCTGTGGCCTTGTGCAGTCAGCTTATGCTCAGCCCATTGATTCCACCACATCCCTGATCGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 90 bp CTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTaGTCGAAGCCCCTTGTTTCCCCTGCTCTCATGGCTTTCTGCTGT +
Preference number: 1 (lower is better)
Translates to: LDNGQKSTDASWHGA*SKPLVSPALMAFCC
Trigger: ACAGCAGAAAGCCATGAGAGCAGGGGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp AGCCACCTGTCTCCTCCAGAGGAAGGCATGGGTCCTGATTGGCACTaGCACTCTTTACAAAGCCTATGGACTTCTAGCCATACACATGTC +
Preference number: 1 (lower is better)
Translates to: SHLSPPEEGMGPDWH*HSLQSLWTSSHTHV
Trigger: GACATGTGTATGGCTAGAAGTCCATAGGCTTTGTAAAGAGTGTCAGTGCCAATCAGGACCCATGCCTTCCTCTGGAGGAGACAGGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp AGGACAGCTCCATTGGGTTGTAGGGTGAATGGAAGGTTTGTTGAGTaGGAGCTGGCTCTAGAGAAAAGCTGGGGCCAGGATACAGTGGAT +
Preference number: 1 (lower is better)
Translates to: RTAPLGCRVNGRFVE*ELALEKSWGQDTVD
Trigger: ATCCACTGTATCCTGGCCCCAGCTTTTCTCTAGAGCCAGCTCTCACTCAACAAACCTTCCATTCACCCTACAACCCAATGGAGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR GCA 90 bp AGATGCACAACACCTAGACCTTGGCAGACCCAAGAGGTGTTGGCTTaGCACCTCTGGGTCCCATGGCTATACAACCTGCAGTTAATACTT +
Preference number: 1 (lower is better)
Translates to: RCTTPRPWQTQEVLA*HLWVPWLYNLQLIL
Trigger: AAGTATTAACTGCAGGTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCTGCCAAGGTCTAGGTGTTGTGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 90 bp GCTAAGTTGGTGGGAAGATCAGGCCTGGGACAAAGTCTAAATGTTTaGCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGT +
Preference number: 1 (lower is better)
Translates to: AKLVGRSGLGQSLNV*LFPSGRCFSLLCEG
Trigger: ACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATTTAGACTTTGTCCCAGGCCTGATCTTCCCACCAACTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTaGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCCTGCTCTCATG +
Preference number: 1 (lower is better)
Translates to: HPTTLDNGQKSTDAS*HGACSKPLVSPALM
Trigger: CATGAGAGCAGGGGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR CCA 90 bp AGAAATGTGTCTTGCATATATCACAGATGCACAACACCTAGACCTTaGCAGACCCAAGAGGTGTTGGCTTGCCACCTCTGGGTCCCATGG +
Preference number: 1 (lower is better)
Translates to: RNVSCIYHRCTTPRP*QTQEVLACHLWVPW
Trigger: CCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCTGCCAAGGTCTAGGTGTTGTGCATCTGTGATATATGCAAGACACATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp CAAATGATGACGGTCACACAGCAGCACAACACACGACATGAACGGTaGGAACAGAACATCCCACATGGCAATTTCAGGCTAGTTCTGTCC +
Preference number: 1 (lower is better)
Translates to: QMMTVTQQHNTRHER*EQNIPHGNFRLVLS
Trigger: GGACAGAACTAGCCTGAAATTGCCATGTGGGATGTTCTGTTCTCACCGTTCATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp AGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATaGACGGTGAGAACAGAACATCCCACATGGCAATTTCAGGCTAGT +
Preference number: 1 (lower is better)
Translates to: SHANDDGHTAAQHTT*TVRTEHPTWQFQAS
Trigger: ACTAGCCTGAAATTGCCATGTGGGATGTTCTGTTCTCACCGTTCATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 90 bp TTTTCAGTTTCCAGCACACAAACATTGTGCAAACGCACAAGGGCCTaGAGGTTTAAGGAGGCTGGTAGACTAGGTAAGGTAAGGAAGGGA +
Preference number: 1 (lower is better)
Translates to: FSVSSTQTLCKRTRA*RFKEAGRLGKVRKG
Trigger: TCCCTTCCTTACCTTACCTAGTCTACCAGCCTCCTTAAACCTGCAGGCCCTTGTGCGTTTGCACAATGTTTGTGTGCTGGAAACTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 90 bp CTAAATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTaGGAGGGTCAACAAGGTATAAAGGTAATGTGGGCAAGGGTCTGT +
Preference number: 1 (lower is better)
Translates to: LNVCLFPSGRCFSLL*EGQQGIKVMWARVC
Trigger: ACAGACCCTTGCCCACATTACCTTTATACCTTGTTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 90 bp AAATGGTCATGTGATGAGTGGTGTGAAAAATTGGCAGTTACGTCTTaGAGGTGTTCAGGAGGACGTGGTGGAGCCATGCAAATGATGACG +
Preference number: 1 (lower is better)
Translates to: KWSCDEWCEKLAVTS*RCSGGRGGAMQMMT
Trigger: CGTCATCATTTGCATGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCACACCACTCATCACATGACCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 90 bp ACACCTAGACCTTGGCAGACCCAAGAGGTGTTGGCTTGCCACCTCTaGGTCCCATGGCTATACAACCTGCAGTTAATACTTTATTTCATA +
Preference number: 1 (lower is better)
Translates to: TPRPWQTQEVLACHL*VPWLYNLQLILYFI
Trigger: TATGAAATAAAGTATTAACTGCAGGTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCTGCCAAGGTCTAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 90 bp GATCACACATTCACAGCGATCTGCGCACTTCTGCACTATCACAAATaGACTTTTCGCTCTCATCTCCGGCTTAGCAATTTGCACCCAGTA +
Preference number: 1 (lower is better)
Translates to: DHTFTAICALLHYHK*TFRSHLRLSNLHPV
Trigger: TACTGGGTGCAAATTGCTAAGCCGGAGATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAATGTGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 90 bp TCTAGCCATACACATGTCTTTTCAGTTTCCAGCACACAAACATTGTaGAAACGCACAAGGGCCTGCAGGTTTAAGGAGGCTGGTAGACTA +
Preference number: 1 (lower is better)
Translates to: SSHTHVFSVSSTQTL*KRTRACRFKEAGRL
Trigger: TAGTCTACCAGCCTCCTTAAACCTGCAGGCCCTTGTGCGTTTGCACAATGTTTGTGTGCTGGAAACTGAAAAGACATGTGTATGGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 90 bp TTGTCATATCATTGGATCACACATTCACAGCGATCTGCGCACTTCTaGACTATCACAAATGGACTTTTCGCTCTCATCTCCGGCTTAGCA +
Preference number: 1 (lower is better)
Translates to: LSYHWITHSQRSAHF*TITNGLFALISGLA
Trigger: TGCTAAGCCGGAGATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAATGTGTGATCCAATGATATGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 90 bp TGCGAGGGTCAACAAGGTATAAAGGTAATGTGGGCAAGGGTCTGTTaGTCTGGTGAAAAAGCAGCTAGTCTTAGACTAAGAGAAGAGAAG +
Preference number: 1 (lower is better)
Translates to: CEGQQGIKVMWARVC*SGEKAASLRLREEK
Trigger: CTTCTCTTCTCTTAGTCTAAGACTAGCTGCTTTTTCACCAGACCAACAGACCCTTGCCCACATTACCTTTATACCTTGTTGACCCTCGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 90 bp TGTTTCAGCTTACTGTGCGAGGGTCAACAAGGTATAAAGGTAATGTaGGCAAGGGTCTGTTGGTCTGGTGAAAAAGCAGCTAGTCTTAGA +
Preference number: 1 (lower is better)
Translates to: CFSLLCEGQQGIKVM*ARVCWSGEKAASLR
Trigger: TCTAAGACTAGCTGCTTTTTCACCAGACCAACAGACCCTTGCCCACATTACCTTTATACCTTGTTGACCCTCGCACAGTAAGCTGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp GGGATGTGTATTCTGTCATGCCTTACTTACAAACCCTACTTCTGTTaGCTTTCACCAGTCCAGTTCACACATTTGTGTTTTCTGGATCCG +
Preference number: 1 (lower is better)
Translates to: GMCILSCLTYKPYFC*LSPVQFTHLCFLDP
Trigger: CGGATCCAGAAAACACAAATGTGTGAACTGGACTGGTGAAAGTCAACAGAAGTAGGGTTTGTAAGTAAGGCATGACAGAATACACATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp CTTATTGCCATCTGGATTACCTGGTCACCAAAATCCTCTCTTAGATaGCCTGTAGAAACAGTCACGTTGCTTTCATTAGCAGTGATGAGT +
Preference number: 1 (lower is better)
Translates to: LIAIWITWSPKSSLR*PVETVTLLSLAVMS
Trigger: ACTCATCACTGCTAATGAAAGCAACGTGACTGTTTCTACAGGTCATCTAAGAGAGGATTTTGGTGACCAGGTAATCCAGATGGCAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 90 bp GTACCTCTCTCATCAGGACAGTTGCAAAGGTCATATGAGTTTATATaGATAAAGATCTTGCTCCCTGCTTGGCAGATAGCAAGTTCTTGT +
Preference number: 1 (lower is better)
Translates to: VPLSSGQLQRSYEFI*IKILLPAWQIASSC
Trigger: ACAAGAACTTGCTATCTGCCAAGCAGGGAGCAAGATCTTTATGCATATAAACTCATATGACCTTTGCAACTGTCCTGATGAGAGAGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR GCA 90 bp GTCTTTTGCATAACATGCCAGTTCATCTTTCACAAAATCACAACTTaGCTACCACAGCTCGCAGGACTCATTAGAGGATATACATCAGCT +
Preference number: 1 (lower is better)
Translates to: VFCITCQFIFHKITT*LPQLAGLIRGYTSA
Trigger: AGCTGATGTATATCCTCTAATGAGTCCTGCGAGCTGTGGTAGGCAAGTTGTGATTTTGTGAAAGATGAACTGGCATGTTATGCAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 90 bp GAAAATTTCTTTCCCTCACTTCCAATCTGGCCCAGAATGAGGCCTTaGAGGTGTTTGATGTCAATGAATAATGTTTTCACCTCCTTCTTG +
Preference number: 1 (lower is better)
Translates to: ENFFPSLPIWPRMRP*RCLMSMNNVFTSFL
Trigger: CAAGAAGGAGGTGAAAACATTATTCATTGACATCAAACACCTCCAAGGCCTCATTCTGGGCCAGATTGGAAGTGAGGGAAAGAAATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp AGATTTGGGGTCAAGATTTCTTTATCCCACTTCCAATCCAGATTCTaGTCTAGAAGATTATGCCTCTACTTTAGAGTCTGTAACACTAGC +
Preference number: 1 (lower is better)
Translates to: RFGVKISLSHFQSRF*SRRLCLYFRVCNTS
Trigger: GCTAGTGTTACAGACTCTAAAGTAGAGGCATAATCTTCTAGATCAGAATCTGGATTGGAAGTGGGATAAAGAAATCTTGACCCCAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp GTATTTCGTTTCCCAGTTCCTATCCTTTTCTCTCTGAAATCACGATaGATGGAAACACTTGAGCTGAAAATTTCTTTCCCTCACTTCCAA +
Preference number: 1 (lower is better)
Translates to: VFRFPVPILFSLKSR*METLELKISFPHFQ
Trigger: TTGGAAGTGAGGGAAAGAAATTTTCAGCTCAAGTGTTTCCATTCATCGTGATTTCAGAGAGAAAAGGATAGGAACTGGGAAACGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp TATACATCAGCTTACACACATATTTTACAGTGGTCCAAAGGAACATaGAAAGCATCAAGCAGATCAGGAACAAAAATGCCCGGTTCACAA +
Preference number: 1 (lower is better)
Translates to: YTSAYTHILQWSKGT*KASSRSGTKMPGSQ
Trigger: TTGTGAACCGGGCATTTTTGTTCCTGATCTGCTTGATGCTTTTCATGTTCCTTTGGACCACTGTAAAATATGTGTGTAAGCTGATGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 90 bp CCACATATAACCATATATTCATATACAAAATGGTCATGTGATGAGTaGTGTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGA +
Preference number: 1 (lower is better)
Translates to: PHITIYSYTKWSCDE*CEKLAVTSWRCSGG
Trigger: TCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCACACCACTCATCACATGACCATTTTGTATATGAATATATGGTTATATGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp ACTAGGGTTAGAACGTTTACAAATGAGAGTCTAGGTCCTATATTATaGAATGGCTATGAGTACAGTATACTGCACGTACTGTTTTTACAC +
Preference number: 1 (lower is better)
Translates to: TRVRTFTNESLGPIL*NGYEYSILHVLFLH
Trigger: GTGTAAAAACAGTACGTGCAGTATACTGTACTCATAGCCATTTCATAATATAGGACCTAGACTCTCATTTGTAAACGTTCTAACCCTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 90 bp GTCAGCCAGGTTGATTCAGAATCTATTTCCTCTAAAGGAAAGGAATaGAACACCAGTACATTTTATTATTTGCACCTCACTCAGATAAAT +
Preference number: 1 (lower is better)
Translates to: VSQVDSESISSKGKE*NTSTFYYLHLTQIN
Trigger: ATTTATCTGAGTGAGGTGCAAATAATAAAATGTACTGGTGTTTCATTCCTTTCCTTTAGAGGAAATAGATTCTGAATCAACCTGGCTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR CCA 90 bp AATAAAATGTTAAGTGTTTCTAGAACAGCTGTAAATAAGGGAGTCTaGGTGTTTGTTAGCAATTCACCTAAATGCCAAGGAGTGAAAAAG +
Preference number: 1 (lower is better)
Translates to: NKMLSVSRTAVNKGV*VFVSNSPKCQGVKK
Trigger: CTTTTTCACTCCTTGGCATTTAGGTGAATTGCTAACAAACACCCAGACTCCCTTATTTACAGCTGTTCTAGAAACACTTAACATTTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCACCCTGCCTCTCAGCTaGGAGGACCGTCATTCGCCA +
Preference number: 2 (lower is better)
Translates to: HSCLRAAFVGESQAERRPTLPLS*EDRHSP
Trigger: TGGCGAATGACGGTCCTCTCAGCTGAGAGGCAGGGT...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR GCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCATGCTGAGCTTCCAATaGTGGCCCCTGGAACCCTGC +
Preference number: 2 (lower is better)
Translates to: HSCLRAAFVGESQAERRPMLSFQ*WPLEPC
Trigger: GCAGGGTTCCAGGGGCCAGCATTGGAAGCTCAGCAT...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR GCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTTGGCCCCTGGAACCCTaGCTCTCAGCTGAGAGGACC +
Preference number: 2 (lower is better)
Translates to: SSSATPEIARPTPPLLPPWPLEP*LSAERT
Trigger: GGTCCTCTCAGCTGAGAGGCAGGGTTCCAGGGGCCA...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR TCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTGGACACTGCAGATGCTaGGCTTCCAATGCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: SSSATPEIARPTPPLLPPGHCRC*ASNAGP
Trigger: GGGGCCAGCATTGGAAGCTCAGCATCTGCAGTGTCC...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR CAA 90 bp GAGAAAGAAAGCCGCACATCCAGGCACAAGGCTGAATTTCCCCCTTaGCCCCATAGGCCTCAGCCACCTGTCTCCTCCAGAGGAAGGCAT +
Preference number: 2 (lower is better)
Translates to: EKESRTSRHKAEFPP*PHRPQPPVSSRGRH
Trigger: ATGCCTTCCTCTGGAGGAGACAGGTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGCGGCTTTCTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACACAACACCTAGACCTTaGCAGACCCAAGAGGTGTTG +
Preference number: 2 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHTTPRP*QTQEVL
Trigger: CAACACCTCTTGGGTCTGCCAAGGTCTAGGTGTTGT...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGCAGAAGGCGAGCAGTaGGTCATTTTGACAACTCTA +
Preference number: 2 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHAEGEQ*VILTTL
Trigger: TAGAGTTGTCAAAATGACTCACTGCTCGCCTTCTGC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACCCCAGAATGAGGCCTTaGAGGTGTTTGATGTCAATG +
Preference number: 2 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHPRMRP*RCLMSM
Trigger: CATTGACATCAAACACCTCCAAGGCCTCATTCTGGG...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTACAGCAGGAAGTGCTTaGAGAACAGTGGGGAGGACA +
Preference number: 2 (lower is better)
Translates to: SSSATPEIARPTPPLLPPTAGSA*RTVGRT
Trigger: TGTCCTCCCCACTGTTCTCCAAGCACTTCCTGCTGT...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR TCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATCCTGCCCAGCAAGTGTaGACATGCCTTAAATCCCCT +
Preference number: 2 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHPAQQV*TCLKSP
Trigger: AGGGGATTTAAGGCATGTTCACACTTGCTGGGCAGG...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACTCAATGCCACATTGCTaGACAGAGAACCCAGAAATG +
Preference number: 2 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHSMPHC*TENPEM
Trigger: CATTTCTGGGTTCTCTGTGCAGCAATGTGGCATTGA...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCCCTGTGTCTGGCACTaGGTCAGATCAAATGCTTTC +
Preference number: 2 (lower is better)
Translates to: QKSTDASWHGACSKPLVSPCVWH*VRSNAF
Trigger: GAAAGCATTTGATCTGACCCAGTGCCAGACACAGGG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR CAA 90 bp TATCACAGATGCACAACACCTAGACCTTGGCAGACCCAAGAGGTGTaGGCTTGCCACCTCTGGGTCCCATGGCTATACAACCTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: YHRCTTPRPWQTQEV*ACHLWVPWLYNLQL
Trigger: TAACTGCAGGTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCTGCCAAGGTCTAGGTGTTGTGCATCTGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACTCTCTGAAATCACGATaGATGGAAACACTTGAGCTG +
Preference number: 2 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHSLKSR*METLEL
Trigger: CAGCTCAAGTGTTTCCATTCATCGTGATTTCAGAGA...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGCCCAACTGTTTGAGTaGATTCTTAACTGGCTTAAG +
Preference number: 2 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHAQLFE*ILNWLK
Trigger: CTTAAGCCAGTTAAGAATTCACTCAAACAGTTGGGC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAATCTCTTCCCCCTCCCTaGCCAGCAAGTGTGAACATG +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQSLPPP*PASVNM
Trigger: CATGTTCACACTTGCTGGGCAGGGAGGGGGAAGAGA...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGGTAGAACTGCTTGCTaGCGGCTTATACTGAATAAA +
Preference number: 2 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHGRTAC*RLILNK
Trigger: TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGATCAGGAACAAAAATaGCCGGTTCACAAAGATGCT +
Preference number: 2 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHDQEQK*PVHKDA
Trigger: AGCATCTTTGTGAACCGGGCATTTTTGTTCCTGATC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACTGAATTTCCCCCTTTaGCCCATAGGCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQLNFPL*PIGLSH
Trigger: GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATAGATGCCTCCTGGCATaGAGCGTGCTCGAAGCCCCT +
Preference number: 2 (lower is better)
Translates to: CGTLGRTACCRLILNKEDRCLLA*SVLEAP
Trigger: AGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGTTTTCACAAGCCCTCTaGGTGATTCTGATGCAGAAT +
Preference number: 2 (lower is better)
Translates to: EAPGILRRSSTAASELPLFSQAL*VILMQN
Trigger: ATTCTGCATCAGAATCACCCAGAGGGCTTGTGAAAA...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGCCCCTTGTTTCCCCTaGTCTCATGGCTTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWAPCFP*SHGFLL
Trigger: CAGCAGAAAGCCATGAGAGCAGGGGAAACAAGGGGC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATCCTGGCATGGAGCGTaGTCGAAGCCCCTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: RLILNKEDALHQSPVMEPSWHGA*SKPLVS
Trigger: GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTCCTGGCATGGAGCGTaGTCGAAGCCCCTTGTTTCC +
Preference number: 2 (lower is better)
Translates to: CGTLGRTACCRLILNKEDSWHGA*SKPLVS
Trigger: GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCATCAGAAATCAACAGATaGCTCCTGGCATGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPSEINR*LLAWSV
Trigger: CACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGA...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATGATCAAATGCTTTCTTaGTCTGTGGCCCAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHDQMLS*SVAQKS
Trigger: TGACTTCTGGGCCACAGATCAAGAAAGCATTTGATC...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGGAAATGCAAATTACCTaGCCTCAACCAGATTTATTG +
Preference number: 2 (lower is better)
Translates to: EAPGILRRSSTAASELPLEMQIT*PQPDLL
Trigger: CAATAAATCTGGTTGAGGTCAGGTAATTTGCATTTC...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCACCTCCCAAAGCATTaGTTGTTTTGCTCAGCTAAG +
Preference number: 2 (lower is better)
Translates to: VRNQQMPPGMERARSPLFHLPKH*LFCSAK
Trigger: CTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACAGTGCCTATTACAACTaGATTAACTACGAGCAAACA +
Preference number: 2 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHSAYYN*INYEQT
Trigger: TGTTTGCTCGTAGTTAATGCAGTTGTAATAGGCACT...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATCAACAGATGCCTCCTaGCATGGAGCGTGCTCGAAG +
Preference number: 2 (lower is better)
Translates to: RLILNKEDALHQSPVMEPSTDAS*HGACSK
Trigger: CTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTCAACAGATGCCTCCTaGCATGGAGCGTGCTCGAAG +
Preference number: 2 (lower is better)
Translates to: CGTLGRTACCRLILNKEDSTDAS*HGACSK
Trigger: CTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTCTGAGCTTCCAATGCTaGCCCCTGGAACCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSLSFQC*PLEPCL
Trigger: GAGGCAGGGTTCCAGGGGCCAGCATTGGAAGCTCAG...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACCTGCCCAGCAAGTGTaGACATGCCTTAAATCCCCT +
Preference number: 2 (lower is better)
Translates to: RLILNKEDALHQSPVMEPPAQQV*TCLKSP
Trigger: AGGGGATTTAAGGCATGTTCACACTTGCTGGGCAGG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGCACAACACACGACATaGACGGTGAGAACAGAACAT +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQAQHTT*TVRTEH
Trigger: ATGTTCTGTTCTCACCGTTCATGTCGTGTGTTGTGC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCTCTTCCCCCTCCCTaGCCAGCAAGTGTGAACATG +
Preference number: 2 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSLPPP*PASVNM
Trigger: CATGTTCACACTTGCTGGGCAGGGAGGGGGAAGAGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGCTCTCATGGCTTTCTaGTGTGACTGCGGATACACA +
Preference number: 2 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAALMAF*CDCGYT
Trigger: TGTGTATCCGCAGTCACAGCAGAAAGCCATGAGAGC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAGGCCACAGAATCAATaGCACATTGCTGCACAGAGA +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQRPQNQ*HIAAQR
Trigger: TCTCTGTGCAGCAATGTGGCATTGATTCTGTGGCCT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATTTCCCCTGCTCTCATaGCTTTCTGCTGTGACTGCG +
Preference number: 2 (lower is better)
Translates to: EGCGTLGRTACCRLILNKFPLLS*LSAVTA
Trigger: CGCAGTCACAGCAGAAAGCCATGAGAGCAGGGGAAA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTGTTTATGCTCATGAATaGACACTTGCTTTGCATGGA +
Preference number: 2 (lower is better)
Translates to: SSSATPEIARPTPPLLPPVYAHE*TLALHG
Trigger: TCCATGCAAAGCAAGTGTCCATTCATGAGCATAAAC...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR CAA 90 bp GGCCAGGATACAGTGGATCTTGAGTCCAAGCAAAGGAATGTGATCTaGACCTGTAGGTCAGGGGTCTTCAATGGAGTTTCACAAAGAAGC +
Preference number: 2 (lower is better)
Translates to: GQDTVDLESKQRNVI*TCRSGVFNGVSQRS
Trigger: GCTTCTTTGTGAAACTCCATTGAAGACCCCTGACCTACAGGTCAAGATCACATTCCTTTGCTTGGACTCAAGATCCACTGTATCCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTTAGGGCTGGATTCTTaGGCCTTCTGTGGCGGATAT +
Preference number: 2 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLGLDS*AFCGGY
Trigger: ATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCCCAGAAGTCACCTTTaGGTTAACACCTCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: CGTLGRTACCRLILNKEDPRSHL*VNTSQS
Trigger: GCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAATTGTGGCACCAGAAGTaGATAGATAAGAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQLWHQK*IDKRQV
Trigger: CACCTGTCTCTTATCTATTCACTTCTGGTGCCACAA...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTCTCAACCAGATTTATTaGATTAGAAAATCTGGGGGT +
Preference number: 2 (lower is better)
Translates to: SSSATPEIARPTPPLLPPLNQIY*IRKSGG
Trigger: ACCCCCAGATTTTCTAATTCAATAAATCTGGTTGAG...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTCAGAAATCAACAGATaGCTCCTGGCATGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: CGTLGRTACCRLILNKEDSEINR*LLAWSV
Trigger: CACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAATTTAGAACCACCCAGTaGTTCATCAGACACCCAAAC +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQFRTTQ*FIRHPN
Trigger: GTTTGGGTGTCTGATGAAGCACTGGGTGGTTCTAAA...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTAATGGACACTTGCTTTaGATGGAATATCCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: SSSATPEIARPTPPLLPPNGHLL*MEYPKK
Trigger: TTTCTTGGGATATTCCATGCAAAGCAAGTGTCCATT...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR CCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAACAGAACATCCCACATaGCAATTTCAGGCTAGTTCT +
Preference number: 2 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPTEHPT*QFQASS
Trigger: AGAACTAGCCTGAAATTGCCATGTGGGATGTTCTGT...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCCCCTCACTTCCAATCTaGCCCAGAATGAGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: TIKNLILLALNQRSQTIAPSLPI*PRMRPW
Trigger: CCAAGGCCTCATTCTGGGCCAGATTGGAAGTGAGGG...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATCACCTCTGGGTCCCATaGCTATACAACCTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: FTAICALLHYHKWTFRSHHLWVP*LYNLQL
Trigger: TAACTGCAGGTTGTATAGCCATGGGACCCAGAGGTG...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 90 bp ACTTCTAGCCATACACATGTCTTTTCAGTTTCCAGCACACAAACATaGTGCAAACGCACAAGGGCCTGCAGGTTTAAGGAGGCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: TSSHTHVFSVSSTQT*CKRTRACRFKEAGR
Trigger: TCTACCAGCCTCCTTAAACCTGCAGGCCCTTGTGCGTTTGCACAATGTTTGTGTGCTGGAAACTGAAAAGACATGTGTATGGCTAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATTAGGGCTGGATTCTTaGGCCTTCTGTGGCGGATAT +
Preference number: 2 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGLGLDS*AFCGGY
Trigger: ATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCCCAGAAGTCACCTTTaGGTTAACACCTCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMPRSHL*VNTSQS
Trigger: GCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACCCAGAAGTCACCTTTaGGTTAACACCTCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGPRSHL*VNTSQS
Trigger: GCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGCTGCCGGCTTATACTaGATAAAGAGGATGCTCTTC +
Preference number: 2 (lower is better)
Translates to: FTAICALLHYHKWTFRSHAAGLY*IKRMLF
Trigger: GAAGAGCATCCTCTTTATTCAGTATAAGCCGGCAGC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAATGGTCCAAAGGAACATaGAAAGCATCAAGCAGATCA +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQWSKGT*KASSRS
Trigger: TGATCTGCTTGATGCTTTTCATGTTCCTTTGGACCA...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCACCTCCCAAAGCATTaGTTGTTTTGCTCAGCTAAG +
Preference number: 2 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLHLPKH*LFCSAK
Trigger: CTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCTCTCATGGCTTTCTaGTGTGACTGCGGATACACA +
Preference number: 2 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGALMAF*CDCGYT
Trigger: TGTGTATCCGCAGTCACAGCAGAAAGCCATGAGAGC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAATTAGGTAGAACTGCTTaGTGCCGGCTTATACTGAAT +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQLGRTA*CRLILN
Trigger: ATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAA...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCCCTGTGTCTGGCACTaGGTCAGATCAAATGCTTTC +
Preference number: 2 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMPCVWH*VRSNAF
Trigger: GAAAGCATTTGATCTGACCCAGTGCCAGACACAGGG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACAATTACAGAAGTGTTaGCATGAGAAGGATGTGGGA +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQQLQKC*HEKDVG
Trigger: TCCCACATCCTTCTCATGCCAACACTTCTGTAATTG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTAGACCCAAGAGGTGTTaGCTTGCCACCTCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVRPKRC*LATSGS
Trigger: GGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTTAGGGCTGGATTCTTaGGCCTTCTGTGGCGGATAT +
Preference number: 2 (lower is better)
Translates to: TIKNLILLALNQRSQTIALGLDS*AFCGGY
Trigger: ATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCATGGCTTTCTGCTGTaGCTGCGGATACACATTCAT +
Preference number: 2 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMHGFLL*LRIHIH
Trigger: ATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACCCAGTGCATGTTTGCTaGGAGGGAAATAGCCAGCGT +
Preference number: 2 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYPVHVC*EGNSQR
Trigger: ACGCTGGCTATTTCCCTCTCAGCAAACATGCACTGG...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACACCTCCCAAAGCATTaGTTGTTTTGCTCAGCTAAG +
Preference number: 2 (lower is better)
Translates to: EGCGTLGRTACCRLILNKHLPKH*LFCSAK
Trigger: CTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCTGGGTCAGATCAAATaGTTTCTTGATCTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMLGQIK*FLDLWP
Trigger: GGGCCACAGATCAAGAAAGCATTTGATCTGACCCAG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTCCCTCACTTCCAATCTaGCCCAGAATGAGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVPSLPI*PRMRPW
Trigger: CCAAGGCCTCATTCTGGGCCAGATTGGAAGTGAGGG...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTGCACAGGAAGGAAATaGCTCATGGAAGTTACACAG +
Preference number: 2 (lower is better)
Translates to: FTAICALLHYHKWTFRSHCTGRK*LMEVTQ
Trigger: CTGTGTAACTTCCATGAGCCATTTCCTTCCTGTGCA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACTTAGGGCTGGATTCTTaGGCCTTCTGTGGCGGATAT +
Preference number: 2 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYLGLDS*AFCGGY
Trigger: ATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAA...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCAAATGCTTTCTTaGTCTGTGGCCCAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMDQMLS*SVAQKS
Trigger: TGACTTCTGGGCCACAGATCAAGAAAGCATTTGATC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTGGTCCAAAGGAACATaGAAAGCATCAAGCAGATCA +
Preference number: 2 (lower is better)
Translates to: FTAICALLHYHKWTFRSHWSKGT*KASSRS
Trigger: TGATCTGCTTGATGCTTTTCATGTTCCTTTGGACCA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACACCTCCCAAAGCATTaGTTGTTTTGCTCAGCTAAG +
Preference number: 2 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGHLPKH*LFCSAK
Trigger: CTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCACATTCACAGCGATCTaGGCACTTCTGCACTATCAC +
Preference number: 2 (lower is better)
Translates to: TIKNLILLALNQRSQTIATFTAI*ALLHYH
Trigger: GTGATAGTGCAGAAGTGCGCAGATCGCTGTGAATGT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATACAGAACATCCCACATaGCAATTTCAGGCTAGTTCT +
Preference number: 2 (lower is better)
Translates to: FTAICALLHYHKWTFRSHTEHPT*QFQASS
Trigger: AGAACTAGCCTGAAATTGCCATGTGGGATGTTCTGT...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTTTGGCTTGCCACCTCTaGGTCCCATGGCTATACAAC +
Preference number: 2 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVLACHL*VPWLYN
Trigger: GTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAA...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACAAAACTGTGCAAATTaGCTCCTCTCTTTAACAGAT +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQQNCAN*LLSLTD
Trigger: ATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 90 bp AAACTATTGCCTTTGGGACTGAATGCTGCTGGCAGACATGTTTGTTaGGCTAGGACAGTGTTTGGAAAGCTGAATTTGAAGGTGTTTGTG +
Preference number: 2 (lower is better)
Translates to: KLLPLGLNAAGRHVC*ARTVFGKLNLKVFV
Trigger: CACAAACACCTTCAAATTCAGCTTTCCAAACACTGTCCTAGCCAAACAAACATGTCTGCCAGCAGCATTCAGTCCCAAAGGCAATAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGATCAAATGCTTTCTTaGTCTGTGGCCCAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: TIKNLILLALNQRSQTIADQMLS*SVAQKS
Trigger: TGACTTCTGGGCCACAGATCAAGAAAGCATTTGATC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTCATGGCTTTCTGCTGTaGCTGCGGATACACATTCAT +
Preference number: 2 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSHGFLL*LRIHIH
Trigger: ATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATG...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTTAATTACATTCTCCTaGGCTTGCTCGACTAGACTT +
Preference number: 2 (lower is better)
Translates to: FTAICALLHYHKWTFRSHLITFS*ACSTRL
Trigger: AAGTCTAGTCGAGCAAGCTCAGGAGAATGTAATTAA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTACTAAGAAGATCAAGCTaGAGCGTTCTCCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVLRRSS*SVLQEG
Trigger: CCCCTCCTGGAGAACGCTTCAGCTTGATCTTCTTAG...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTGGTATGCTTGCAACTaGTGGCTTTGGGTTGATACC +
Preference number: 2 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSWYACN*WLWVDT
Trigger: GGTATCAACCCAAAGCCATCAGTTGCAAGCATACCA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTTCAGAAATCAACAGATaGCTCCTGGCATGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVSEINR*LLAWSV
Trigger: CACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGA...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAATGTCATATAGTCTTTTaGATAACATGCCAGTTCATC +
Preference number: 2 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQCHIVF*ITCQFI
Trigger: GATGAACTGGCATGTTATGCAAAAGACTATATGACA...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCCGATCTGCGCACTTCTaGACTATCACAAATGGACTT +
Preference number: 2 (lower is better)
Translates to: TIKNLILLALNQRSQTIARSAHF*TITNGL
Trigger: AAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCG...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCTTTCCCCTGCTCTCATaGCTTTCTGCTGTGACTGCG +
Preference number: 2 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFFPLLS*LSAVTA
Trigger: CGCAGTCACAGCAGAAAGCCATGAGAGCAGGGGAAA...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 90 bp GGTAGACTAGGTAAGGTAAGGAAGGGAAAATTCACCTCATTCTTATaGCCATCTGGATTACCTGGTCACCAAAATCCTCTCTTAGATGAC +
Preference number: 2 (lower is better)
Translates to: GRLGKVRKGKFTSFL*PSGLPGHQNPLLDD
Trigger: GTCATCTAAGAGAGGATTTTGGTGACCAGGTAATCCAGATGGCAATAAGAATGAGGTGAATTTTCCCTTCCTTACCTTACCTAGTCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 90 bp TGGGATGTGTATTCTGTCATGCCTTACTTACAAACCCTACTTCTGTaGACTTTCACCAGTCCAGTTCACACATTTGTGTTTTCTGGATCC +
Preference number: 2 (lower is better)
Translates to: WDVYSVMPYLQTLLL*TFTSPVHTFVFSGS
Trigger: GGATCCAGAAAACACAAATGTGTGAACTGGACTGGTGAAAGTCAACAGAAGTAGGGTTTGTAAGTAAGGCATGACAGAATACACATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 90 bp TTTTGTGTGTACACTCACCAAGTCACTATCAAGAATCTGATCCTGTaGGCTCTAAATCAGAGGTCCCAAACTATTGCCTTTGGGACTGAA +
Preference number: 2 (lower is better)
Translates to: FCVYTHQVTIKNLIL*ALNQRSQTIAFGTE
Trigger: TTCAGTCCCAAAGGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGTGACTTGGTGAGTGTACACACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCAAATCCTCTCTTAGATaGCCTGTAGAAACAGTCACG +
Preference number: 2 (lower is better)
Translates to: TIKNLILLALNQRSQTIAKSSLR*PVETVT
Trigger: CGTGACTGTTTCTACAGGTCATCTAAGAGAGGATTT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATCAGAAAGCACCTCAGTaGTTCATGACTTCCAAGCAA +
Preference number: 2 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHQKAPQ*FMTSKQ
Trigger: TTGCTTGGAAGTCATGAACCACTGAGGTGCTTTCTG...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTATGTGGTGGAATCAATaGGCTGAGCATAAGCTGACT +
Preference number: 2 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSMWWNQ*AEHKLT
Trigger: AGTCAGCTTATGCTCAGCCCATTGATTCCACCACAT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAAGAATAAAGCAGGTATaGTTCAAGGAAAGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGRIKQV*FKERGK
Trigger: TTTTCCCCTTTCCTTGAATCATACCTGCTTTATTCT...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTTTCATCAGTCACCAGTaGTGGAGCCAATGTGAAAAG +
Preference number: 2 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVFISHQ*WSQCEK
Trigger: CTTTTCACATTGGCTCCATCACTGGTGACTGATGAA...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATCACCTCAGTGGTTCATaGCTTCCAAGCAAAATGAAA +
Preference number: 2 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHHLSGS*LPSKMK
Trigger: TTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTG...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR-3UTR GCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACGGTAGAACTGCTTGCTaGCGGCTTATACTGAATAAA +
Preference number: 2 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYGRTAC*RLILNK
Trigger: TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACC...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTTCAATGCCACATTGCTaGACAGAGAACCCAGAAATG +
Preference number: 2 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVSMPHC*TENPEM
Trigger: CATTTCTGGGTTCTCTGTGCAGCAATGTGGCATTGA...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGTCTGTAACACTAGCTaGTTTAAAGTTGCGTGTCTA +
Preference number: 2 (lower is better)
Translates to: TIKNLILLALNQRSQTIAVCNTS*FKVACL
Trigger: TAGACACGCAACTTTAAACCAGCTAGTGTTACAGAC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCCCCAGAATGAGGCCTTaGAGGTGTTTGATGTCAATG +
Preference number: 2 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFPRMRP*RCLMSM
Trigger: CATTGACATCAAACACCTCCAAGGCCTCATTCTGGG...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGGTCAGGGGTCTTCAATaGAGTTTCACAAAGAAGCCC +
Preference number: 2 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLVRGLQ*SFTKKP
Trigger: GGGCTTCTTTGTGAAACTCCATTGAAGACCCCTGAC...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGAGACTTCAGCATTGTaGTTGTGCTTGATACTTAAA +
Preference number: 2 (lower is better)
Translates to: TIKNLILLALNQRSQTIAETSAL*LCLILK
Trigger: TTTAAGTATCAAGCACAATCACAATGCTGAAGTCTC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTATGCAGAATAAAATTTaGGAATCATGGTCTAGGCCT +
Preference number: 2 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSMQNKI*ESWSRP
Trigger: AGGCCTAGACCATGATTCTCAAATTTTATTCTGCAT...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR GCA 90 bp AGTAAGCAGAGAACAAAATCACATGATTTTGTTCACCCTAGCAGGGTCTCTGATATGCTAAAACTCTGCTaGACACACCTTATTAACTCG +
Preference number: 2 (lower is better)
Translates to: SKQRTKSHDFVHPSRVSDMLKLC*THLINS
Trigger: CGAGTTAATAAGGTGTGTGCAGCAGAGTTTTAGCAT...ATCAGAGACCCTGCTAGGGTGAACAAAATCATGTGATTTTGTTCTCTGCTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR-3UTR CCA 90 bp ACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTTTGGCAGTCAGAGCGTTTaGATGAGCTCCAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: THFALILDSSRISYVSPFGSQSV*MSSKRK
Trigger: TTTCCTTTTGGAGCTCATCCAAACGCTCTGACTGCC...AAACGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR CAA 90 bp TTTCATGCACAACAAAAGAATCAGGTAATTGCAAGATCAGGACTGTaGAGTATTTCGTTTCCCAGTTCCTATCCTTTTCTCTCTGAAATC +
Preference number: 2 (lower is better)
Translates to: FHAQQKNQVIARSGL*SISFPSSYPFLSEI
Trigger: GATTTCAGAGAGAAAAGGATAGGAACTGGGAAACGAAATACTCAACAGTCCTGATCTTGCAATTACCTGATTCTTTTGTTGTGCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR TCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTAGACTTCCAAGCAAAATaGAATCCGAAACCTAAGAAG +
Preference number: 2 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVDFQAK*NPKPKK
Trigger: CTTCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTC...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR-3UTR TCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCAAAAGCGAGACTAAATaGGATGTCCTGATAGTGAGT +
Preference number: 2 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFKSETK*DVLIVS
Trigger: ACTCACTATCAGGACATCTCATTTAGTCTCGCTTTT...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACAGGAATCCAAAGATTTaGGGTCAAGATTTCTTTATC +
Preference number: 2 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYRNPKI*GQDFFI
Trigger: GATAAAGAAATCTTGACCCCAAATCTTTGGATTCCT...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTGTAAATAAGGGAGTCTaGGTGTTTGTTAGCAATTCA +
Preference number: 2 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVVNKGV*VFVSNS
Trigger: TGAATTGCTAACAAACACCCAGACTCCCTTATTTAC...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR GCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTAATGATGCTAAAACTCTaGTGCACACACCTTATTAAC +
Preference number: 2 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVMMLKL*CTHLIN
Trigger: GTTAATAAGGTGTGTGCAGCAGAGTTTTAGCATCAT...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR GCA 72 bp GCCGCACATCCAGGCACAAGGCTGAATTTCCCCCTTTaGCCCATAGGCCTCAGCCACCTGTCTCCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: AAHPGTRLNFPL*PIGLSHLSPPE
Trigger: CTCTGGAGGAGACAGGTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 72 bp AGCTGGGGTAGGACACTGCAGATGCTGAGCTTCCAATaGTGGCCCCTGGAACCCTGCCTCTCAGCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: SWGRTLQMLSFQ*WPLEPCLSAER
Trigger: CCTCTCAGCTGAGAGGCAGGGTTCCAGGGGCCAGCATTGGAAGCTCAGCATCTGCAGTGTCCTACCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR CCA 72 bp TGGGGTAGGACACTGCAGATGCTGAGCTTCCAATGCTaGCCCCTGGAACCCTGCCTCTCAGCTGAGAGGACC +
Preference number: 3 (lower is better)
Translates to: WGRTLQMLSFQC*PLEPCLSAERT
Trigger: GGTCCTCTCAGCTGAGAGGCAGGGTTCCAGGGGCCAGCATTGGAAGCTCAGCATCTGCAGTGTCCTACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR GCA 72 bp AGAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTaGCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCA +
Preference number: 3 (lower is better)
Translates to: RSPRNFEEELHS*LRAAFVGESQA
Trigger: TGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR CAA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTGAAGCCCCCGGAATTTaGAGGAGGAGCTCCACAGCT +
Preference number: 3 (lower is better)
Translates to: SSSATPEIARPTPPLLPPEAPGI*RRSSTA
Trigger: AGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR GCA 72 bp GGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTaGTCGAAGCCCCTTGTTTCCCCTGCTCTCATGGCT +
Preference number: 3 (lower is better)
Translates to: GQKSTDASWHGA*SKPLVSPALMA
Trigger: AGCCATGAGAGCAGGGGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR GCA 72 bp ACACCTAGACCTTGGCAGACCCAAGAGGTGTTGGCTTaGCACCTCTGGGTCCCATGGCTATACAACCTGCAG +
Preference number: 3 (lower is better)
Translates to: TPRPWQTQEVLA*HLWVPWLYNLQ
Trigger: CTGCAGGTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCTGCCAAGGTCTAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp GCACAACACCTAGACCTTGGCAGACCCAAGAGGTGTTaGCTTGCCACCTCTGGGTCCCATGGCTATACAACC +
Preference number: 3 (lower is better)
Translates to: AQHLDLGRPKRC*LATSGSHGYTT
Trigger: GGTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCTGCCAAGGTCTAGGTGTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp GGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTaGAGCCATGCAAATGATGACGGTCACACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: GSYVLEVFRRTW*SHANDDGHTAA
Trigger: TGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACCAAGAGGTGTTGGCTaGCCACCTCTGGGTCCCATG +
Preference number: 3 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQPRGVG*PPLGPM
Trigger: CATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp GAGCGTGCTCGAAGCCCCTTGTTTCCCCTGCTCTCATaGCTTTCTGCTGTGACTGCGGATACACATTCATCT +
Preference number: 3 (lower is better)
Translates to: ERARSPLFPLLS*LSAVTADTHSS
Trigger: AGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGAGAGCAGGGGAAACAAGGGGCTTCGAGCACGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp CTTCAATGGAGTTTCACAAAGAAGCCCCCGGAATTTTaGGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: LQWSFTKKPPEF*GGAPQLPQSCL
Trigger: AAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTCTTTGTGAAACTCCATTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR CCA 72 bp ATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTaGTGGAGCCATGCAAATGATGACGGTCACACAGCA +
Preference number: 3 (lower is better)
Translates to: IGSYVLEVFRRT*WSHANDDGHTA
Trigger: TGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp CCTTGGCAGACCCAAGAGGTGTTGGCTTGCCACCTCTaGGTCCCATGGCTATACAACCTGCAGTTAATACTT +
Preference number: 3 (lower is better)
Translates to: PWQTQEVLACHL*VPWLYNLQLIL
Trigger: AAGTATTAACTGCAGGTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCTGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp CAGGGATGTGGTGGAATCAATGGGCTGAGCATAAGCTaGCTGCACAAGGCCACAGAATCAATGCCACATTGC +
Preference number: 3 (lower is better)
Translates to: QGCGGINGLSIS*LHKATESMPHC
Trigger: GCAATGTGGCATTGATTCTGTGGCCTTGTGCAGTCAGCTTATGCTCAGCCCATTGATTCCACCACATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp CCATTGGGTTGTAGGGTGAATGGAAGGTTTGTTGAGTaGGAGCTGGCTCTAGAGAAAAGCTGGGGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: PLGCRVNGRFVE*ELALEKSWGQD
Trigger: ATCCTGGCCCCAGCTTTTCTCTAGAGCCAGCTCTCACTCAACAAACCTTCCATTCACCCTACAACCCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR GCA 72 bp TCGAAGCCCCTTGTTTCCCCTGCTCTCATGGCTTTCTaGTGTGACTGCGGATACACATTCATCTCTAACCCT +
Preference number: 3 (lower is better)
Translates to: SKPLVSPALMAF*CDCGYTFISNP
Trigger: AGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGAGAGCAGGGGAAACAAGGGGCTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp TCTTGCATATATCACAGATGCACAACACCTAGACCTTaGCAGACCCAAGAGGTGTTGGCTTGCCACCTCTGG +
Preference number: 3 (lower is better)
Translates to: SCIYHRCTTPRP*QTQEVLACHLW
Trigger: CCAGAGGTGGCAAGCCAACACCTCTTGGGTCTGCCAAGGTCTAGGTGTTGTGCATCTGTGATATATGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCTCCCAAAGCATTGCTaGTTTTGCTCAGCTAAGAAT +
Preference number: 3 (lower is better)
Translates to: QKSTDASWHGACSKPLVSLPKHC*FCSAKN
Trigger: ATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp ACGGTCACACAGCAGCACAACACACGACATGAACGGTaGGAACAGAACATCCCACATGGCAATTTCAGGCTA +
Preference number: 3 (lower is better)
Translates to: TVTQQHNTRHER*EQNIPHGNFRL
Trigger: TAGCCTGAAATTGCCATGTGGGATGTTCTGTTCTCACCGTTCATGTCGTGTGTTGTGCTGCTGTGTGACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp TCTCCTCCAGAGGAAGGCATGGGTCCTGATTGGCACTaGCACTCTTTACAAAGCCTATGGACTTCTAGCCAT +
Preference number: 3 (lower is better)
Translates to: SPPEEGMGPDWH*HSLQSLWTSSH
Trigger: ATGGCTAGAAGTCCATAGGCTTTGTAAAGAGTGTCAGTGCCAATCAGGACCCATGCCTTCCTCTGGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 72 bp TGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTaGGAGGGTCAACAAGGTATAAAGGTAATGTGGGCA +
Preference number: 3 (lower is better)
Translates to: CLFPSGRCFSLL*EGQQGIKVMWA
Trigger: TGCCCACATTACCTTTATACCTTGTTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 72 bp GTGGGAAGATCAGGCCTGGGACAAAGTCTAAATGTTTaGCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTG +
Preference number: 3 (lower is better)
Translates to: VGRSGLGQSLNV*LFPSGRCFSLL
Trigger: CAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATTTAGACTTTGTCCCAGGCCTGATCTTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp TGTGATGAGTGGTGTGAAAAATTGGCAGTTACGTCTTaGAGGTGTTCAGGAGGACGTGGTGGAGCCATGCAA +
Preference number: 3 (lower is better)
Translates to: CDEWCEKLAVTS*RCSGGRGGAMQ
Trigger: TTGCATGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCACACCACTCATCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATCTCCCAAAGCATTGCTaGTTTTGCTCAGCTAAGAAT +
Preference number: 3 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHLPKHC*FCSAKN
Trigger: ATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAG...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAACTGATGGCTTTGGGTaGATACCAAACTCCCAGTCA +
Preference number: 3 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQTDGFG*IPNSQS
Trigger: TGACTGGGAGTTTGGTATCAACCCAAAGCCATCAGT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTCGCCTAAGTATTCCTTaGAAATGCAAATTACCTGAC +
Preference number: 3 (lower is better)
Translates to: SSSATPEIARPTPPLLPPRLSIP*KCKLPD
Trigger: GTCAGGTAATTTGCATTTCAAAGGAATACTTAGGCG...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTAGATCAAATGCTTTCTaGATCTGTGGCCCAGAAGTC +
Preference number: 3 (lower is better)
Translates to: QLLIMVRNQQMPPGMERARSNAF*ICGPEV
Trigger: GACTTCTGGGCCACAGATCAAGAAAGCATTTGATCT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGAGTGGTGTGAAAAATaGGCAGTTACGTCTTGGAGG +
Preference number: 3 (lower is better)
Translates to: FTAICALLHYHKWTFRSHEWCEK*AVTSWR
Trigger: CCTCCAAGACGTAACTGCCAATTTTTCACACCACTC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATACTGATGGCTTTGGGTaGATACCAAACTCCCAGTCA +
Preference number: 3 (lower is better)
Translates to: FTAICALLHYHKWTFRSHTDGFG*IPNSQS
Trigger: TGACTGGGAGTTTGGTATCAACCCAAAGCCATCAGT...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTCCAGCACACAAACATaGTGCAAACGCACAAGGGCC +
Preference number: 3 (lower is better)
Translates to: TIKNLILLALNQRSQTIASSTQT*CKRTRA
Trigger: GGCCCTTGTGCGTTTGCACAATGTTTGTGTGCTGGA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp AATGATGACGGTCACACAGCAGCACAACACACGACATaGACGGTGAGAACAGAACATCCCACATGGCAATTT +
Preference number: 3 (lower is better)
Translates to: NDDGHTAAQHTT*TVRTEHPTWQF
Trigger: AAATTGCCATGTGGGATGTTCTGTTCTCACCGTTCATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 72 bp CATTGGATCACACATTCACAGCGATCTGCGCACTTCTaGACTATCACAAATGGACTTTTCGCTCTCATCTCC +
Preference number: 3 (lower is better)
Translates to: HWITHSQRSAHF*TITNGLFALIS
Trigger: GGAGATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAATGTGTGATCCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 72 bp ACACATGTCTTTTCAGTTTCCAGCACACAAACATTGTaGAAACGCACAAGGGCCTGCAGGTTTAAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: THVFSVSSTQTL*KRTRACRFKEA
Trigger: AGCCTCCTTAAACCTGCAGGCCCTTGTGCGTTTGCACAATGTTTGTGTGCTGGAAACTGAAAAGACATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATaGACTTTTCGCTCTCATCTCCGGCTTAGCAATTTG +
Preference number: 3 (lower is better)
Translates to: FTAICALLHYHK*TFRSHLRLSNL
Trigger: CAAATTGCTAAGCCGGAGATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp TTACTGTGCGAGGGTCAACAAGGTATAAAGGTAATGTaGGCAAGGGTCTGTTGGTCTGGTGAAAAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: LLCEGQQGIKVM*ARVCWSGEKAA
Trigger: AGCTGCTTTTTCACCAGACCAACAGACCCTTGCCCACATTACCTTTATACCTTGTTGACCCTCGCACAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACTGCTAATACACCTTTaGGCTTGCAGAGATAATACA +
Preference number: 3 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQLLIHL*ACRDNT
Trigger: TGTATTATCTCTGCAAGCCAAAAGGTGTATTAGCAG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp TCTAAATCAGAGGTCCCAAACTATTGCCTTTGGGACTaGATGCTGCTGGCAGACATGTTTGTTTGGCTAGGA +
Preference number: 3 (lower is better)
Translates to: SKSEVPNYCLWD*MLLADMFVWLG
Trigger: TCCTAGCCAAACAAACATGTCTGCCAGCAGCATTCAGTCCCAAAGGCAATAGTTTGGGACCTCTGATTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp ACCCAAGAGGTGTTGGCTTGCCACCTCTGGGTCCCATaGCTATACAACCTGCAGTTAATACTTTATTTCATA +
Preference number: 3 (lower is better)
Translates to: TQEVLACHLWVP*LYNLQLILYFI
Trigger: TATGAAATAAAGTATTAACTGCAGGTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCTCCCAAAGCATTGCTaGTTTTGCTCAGCTAAGAAT +
Preference number: 3 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLPKHC*FCSAKN
Trigger: ATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCTCCCAAAGCATTGCTaGTTTTGCTCAGCTAAGAAT +
Preference number: 3 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLPKHC*FCSAKN
Trigger: ATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAATGGAAGTTACACAGTTaGTGTCTACAGTCATTTAAG +
Preference number: 3 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQWKLHS*CLQSFK
Trigger: CTTAAATGACTGTAGACACAAACTGTGTAACTTCCA...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp TTTCCCTCACTTCCAATCTGGCCCAGAATGAGGCCTTaGAGGTGTTTGATGTCAATGAATAATGTTTTCACC +
Preference number: 3 (lower is better)
Translates to: FPSLPIWPRMRP*RCLMSMNNVFT
Trigger: GGTGAAAACATTATTCATTGACATCAAACACCTCCAAGGCCTCATTCTGGGCCAGATTGGAAGTGAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTTCACTTCAACTCATTTaGTTGAGGCAGTCAGAGCGT +
Preference number: 3 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSSLQLI*LRQSER
Trigger: ACGCTCTGACTGCCTCAACAAAATGAGTTGAAGTGA...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR-3UTR CAA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATAGGCCTTGGAGGTGTTaGATGTCAATGAATAATGTT +
Preference number: 3 (lower is better)
Translates to: FTAICALLHYHKWTFRSHRPWRC*MSMNNV
Trigger: AACATTATTCATTGACATCAAACACCTCCAAGGCCT...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp CAACAAGGTATAAAGGTAATGTGGGCAAGGGTCTGTTaGTCTGGTGAAAAAGCAGCTAGTCTTAGACTAAGA +
Preference number: 3 (lower is better)
Translates to: QQGIKVMWARVC*SGEKAASLRLR
Trigger: TCTTAGTCTAAGACTAGCTGCTTTTTCACCAGACCAACAGACCCTTGCCCACATTACCTTTATACCTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp AGTGACAGGAAGCAGGTAAGTCTTCATACCATGCTATaGTACTCTTCTTCTGAATCTCTCTCACAAAGACTC +
Preference number: 3 (lower is better)
Translates to: SDRKQVSLHTML*YSSSESLSQRL
Trigger: GAGTCTTTGTGAGAGAGATTCAGAAGAAGAGTACCATAGCATGGTATGAAGACTTACCTGCTTCCTGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTGCAAGATCAGGACTGTaGAGTATTTCGTTTCCCAGT +
Preference number: 3 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSARSGL*SISFPS
Trigger: ACTGGGAAACGAAATACTCAACAGTCCTGATCTTGC...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTTAGAGAGGCAAAAATaGGACGAGGTCAATGTGAAC +
Preference number: 3 (lower is better)
Translates to: TIKNLILLALNQRSQTIALERQK*DEVNVN
Trigger: GTTCACATTGACCTCGTCCAATTTTTGCCTCTCTAA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGCAAAGGAATGTGATCTaGACCTGTAGGTCAGGGGTC +
Preference number: 3 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLQRNVI*TCRSGV
Trigger: GACCCCTGACCTACAGGTCAAGATCACATTCCTTTG...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR TCA 72 bp GTAGGGATTCATGACTCAAGGAAGTTTAAGAACGACTaGTTTATTCTCAGACCCAGTGCATGTTTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: VGIHDSRKFKND*FILRPSACLLR
Trigger: TCTCAGCAAACATGCACTGGGTCTGAGAATAAATCAGTCGTTCTTAAACTTCCTTGAGTCATGAATCCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp ATCTGGATTACCTGGTCACCAAAATCCTCTCTTAGATaGCCTGTAGAAACAGTCACGTTGCTTTCATTAGCA +
Preference number: 3 (lower is better)
Translates to: IWITWSPKSSLR*PVETVTLLSLA
Trigger: TGCTAATGAAAGCAACGTGACTGTTTCTACAGGTCATCTAAGAGAGGATTTTGGTGACCAGGTAATCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR GCA 72 bp ATAACATGCCAGTTCATCTTTCACAAAATCACAACTTaGCTACCACAGCTCGCAGGACTCATTAGAGGATAT +
Preference number: 3 (lower is better)
Translates to: ITCQFIFHKITT*LPQLAGLIRGY
Trigger: ATATCCTCTAATGAGTCCTGCGAGCTGTGGTAGGCAAGTTGTGATTTTGTGAAAGATGAACTGGCATGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp ACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTTTAGGCAGTCAGAGCGTTaGGATGAGCTCCAAAAGGAA +
Preference number: 3 (lower is better)
Translates to: THFALILDSSRISYVSPFRQSER*DELQKE
Trigger: TTCCTTTTGGAGCTCATCCAAACGCTCTGACTGCCT...AAACGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR-3UTR CAA 90 bp AGTAAGCAGAGAACAAAATCACATGATTTTGTTCACCCTAGCAGGGTCTCTGATAACAGCCTGGACCCTTaGTCATTAAAGCTATTTGAC +
Preference number: 3 (lower is better)
Translates to: SKQRTKSHDFVHPSRVSDNSLDP*SLKLFD
Trigger: GTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTT...ATCAGAGACCCTGCTAGGGTGAACAAAATCATGTGATTTTGTTCTCTGCTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCCTAGCTGGTTTAAAGTaGCGTGTCTATTCAGATTGT +
Preference number: 3 (lower is better)
Translates to: TIKNLILLALNQRSQTIALAGLK*RVYSDC
Trigger: ACAATCTGAATAGACACGCAACTTTAAACCAGCTAG...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTCAAAACTGTGCAAATaGGCTCCTCTCTTTAACAGA +
Preference number: 3 (lower is better)
Translates to: TIKNLILLALNQRSQTIASKLCK*APLFNR
Trigger: TCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGCTTCAACTCATTTTGTaGAGGCAGTCAGAGCGTTTG +
Preference number: 3 (lower is better)
Translates to: ETHFALILDSSRISYVSPLQLIL*RQSERL
Trigger: CAAACGCTCTGACTGCCTCAACAAAATGAGTTGAAG...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTAGGGAGTCTGGGTGTTaGTTAGCAATTCACCTAAAT +
Preference number: 3 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVRESGC*LAIHLN
Trigger: ATTTAGGTGAATTGCTAACAAACACCCAGACTCCCT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTGGAAGTTACACAGTTaGTGTCTACAGTCATTTAAG +
Preference number: 3 (lower is better)
Translates to: TIKNLILLALNQRSQTIAWKLHS*CLQSFK
Trigger: CTTAAATGACTGTAGACACAAACTGTGTAACTTCCA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp GCTTACACACATATTTTACAGTGGTCCAAAGGAACATaGAAAGCATCAAGCAGATCAGGAACAAAAATGCCC +
Preference number: 3 (lower is better)
Translates to: AYTHILQWSKGT*KASSRSGTKMP
Trigger: GGGCATTTTTGTTCCTGATCTGCTTGATGCTTTTCATGTTCCTTTGGACCACTGTAAAATATGTGTGTAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCAGGGAGTCTGGGTGTTaGTTAGCAATTCACCTAAAT +
Preference number: 3 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFRESGC*LAIHLN
Trigger: ATTTAGGTGAATTGCTAACAAACACCCAGACTCCCT...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR-3UTR CAA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAATACCTGAGATTTCACTaGAGGAAGAATTCAAGGACT +
Preference number: 3 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQYLRFH*RKNSRT
Trigger: AGTCCTTGAATTCTTCCTCAAGTGAAATCTCAGGTA...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR TCA 72 bp ATAGCTTGTTTTGATTTGAGGTCTTGGTTGAGCTACTaGAAACATAATCCACTCATACCCTCGTTTCCAAAC +
Preference number: 3 (lower is better)
Translates to: IACFDLRSWLSY*KHNPLIPSFPN
Trigger: GTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGTAGCTCAACCAAGACCTCAAATCAAAACAAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
3UTR TCA 72 bp ATTCTGTCATGCCTTACTTACAAACCCTACTTCTGTTaGCTTTCACCAGTCCAGTTCACACATTTGTGTTTT +
Preference number: 3 (lower is better)
Translates to: ILSCLTYKPYFC*LSPVQFTHLCF
Trigger: AAAACACAAATGTGTGAACTGGACTGGTGAAAGTCAACAGAAGTAGGGTTTGTAAGTAAGGCATGACAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp TTGAAATGCAAATTACCTGACCTCAACCAGATTTATTaGATTAGAAAATCTGGGGGTGGAGCCAGCAATTGT +
Preference number: 3 (lower is better)
Translates to: LKCKLPDLNQIY*IRKSGGGASNC
Trigger: ACAATTGCTGGCTCCACCCCCAGATTTTCTAATTCAATAAATCTGGTTGAGGTCAGGTAATTTGCATTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR TCA 72 bp TACTGCTTACTCAAGACTTTTAGAGGTTTATGCTCATaGATGGACACTTGCTTTGCATGGAATATCCCAAGA +
Preference number: 3 (lower is better)
Translates to: YCLLKTFRGLCS*MDTCFAWNIPR
Trigger: TCTTGGGATATTCCATGCAAAGCAAGTGTCCATTCATGAGCATAAACCTCTAAAAGTCTTGAGTAAGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR GCA 72 bp GTCCTATATTATGAAATGGCTATGAGTACAGTATACTaGACGTACTGTTTTTACACAGCGGTAGCAGCAATA +
Preference number: 3 (lower is better)
Translates to: VLYYEMAMSTVY*TYCFYTAVAAI
Trigger: TATTGCTGCTACCGCTGTGTAAAAACAGTACGTGCAGTATACTGTACTCATAGCCATTTCATAATATAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp AGATTATGCCTCTACTTTAGAGTCTGTAACACTAGCTaGTTTAAAGTTGCGTGTCTATTCAGATTGTACGTG +
Preference number: 3 (lower is better)
Translates to: RLCLYFRVCNTS*FKVACLFRLYV
Trigger: CACGTACAATCTGAATAGACACGCAACTTTAAACCAGCTAGTGTTACAGACTCTAAAGTAGAGGCATAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CCA 72 bp TTAAGTGTTTCTAGAACAGCTGTAAATAAGGGAGTCTaGGTGTTTGTTAGCAATTCACCTAAATGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: LSVSRTAVNKGV*VFVSNSPKCQG
Trigger: TCCTTGGCATTTAGGTGAATTGCTAACAAACACCCAGACTCCCTTATTTACAGCTGTTCTAGAAACACTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp GTCAAGATTTCTTTATCCCACTTCCAATCCAGATTCTaGTCTAGAAGATTATGCCTCTACTTTAGAGTCTGT +
Preference number: 3 (lower is better)
Translates to: VKISLSHFQSRF*SRRLCLYFRVC
Trigger: ACAGACTCTAAAGTAGAGGCATAATCTTCTAGATCAGAATCTGGATTGGAAGTGGGATAAAGAAATCTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp CCTTTCCCTCATAATCAATATAGAACCAGGGGCTCATaGACCCTTTCAAGTTATATTGCAACTTTGCATTAT +
Preference number: 3 (lower is better)
Translates to: PFPHNQYRTRGS*TLSSYIATLHY
Trigger: ATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTCTATATTGATTATGAGGGAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp AATTGGAACCAGCCTTTCTTTTGGTTGACTCCAATCTaGGAGACAGAATATCCAACTTGTAAAAAGAAGAGA +
Preference number: 3 (lower is better)
Translates to: NWNQPFFWLTPI*ETEYPTCKKKR
Trigger: TCTCTTCTTTTTACAAGTTGGATATTCTGTCTCTCAGATTGGAGTCAACCAAAAGAAAGGCTGGTTCCAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp AGAACGTTTACAAATGAGAGTCTAGGTCCTATATTATaGAATGGCTATGAGTACAGTATACTGCACGTACTG +
Preference number: 3 (lower is better)
Translates to: RTFTNESLGPIL*NGYEYSILHVL
Trigger: CAGTACGTGCAGTATACTGTACTCATAGCCATTTCATAATATAGGACCTAGACTCTCATTTGTAAACGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp GAAAGTTTTTCCCGTGGTATCTGCCAACTTCTGCTCTaGATTGTATATCTAAACAATCAAACTCAAAGTGCA +
Preference number: 3 (lower is better)
Translates to: ESFSRGICQLLL*IVYLNNQTQSA
Trigger: TGCACTTTGAGTTTGATTGTTTAGATATACAATTCAGAGCAGAAGTTGGCAGATACCACGGGAAAAACTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR TCA 72 bp ATACCAGCCCTTGAAAAACTCCAATTAAATTTATGCTaGGCTCAGATTAGATGGCAAAACTCTAGGTATGAA +
Preference number: 3 (lower is better)
Translates to: IPALEKLQLNLC*AQIRWQNSRYE
Trigger: TTCATACCTAGAGTTTTGCCATCTAATCTGAGCTCAGCATAAATTTAATTGGAGTTTTTCAAGGGCTGGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCCGGAGATACTGGGGGTaGGGCCAACATGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPRRYWG*GQHAGL
Trigger: TAGGCCAGCATGTTGGCCTCACCCCCAGTATCTCCG...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCCTGAGCTTCCAATGCTaGCCCCTGGAACCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPLSFQC*PLEPCL
Trigger: GAGGCAGGGTTCCAGGGGCCAGCATTGGAAGCTCAG...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGGCGTCCGTGCAGTCTaGCGAGGTCCTCGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSGVRAV*RGPRAD
Trigger: ATCCGCTCGAGGACCTCGTCAGACTGCACGGACGCC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCTTCCTCTGCCACCCCTaGGATAGCAAGACCAACCCC +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPFLCHP*DSKTNP
Trigger: GGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAA...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGGGTCCGGAAGCGCTTaGGCGTGTAGTTGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHGSGSA*ACSCSD
Trigger: ATCGCTGCAACTACACGCGCAAGCGCTTCCGGACCC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCCCCCATGGACAGAGATaGGAAGCTTGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPPHGQR*EAWEAP
Trigger: TGGAGCTTCCCAAGCTTCTCATCTCTGTCCATGGGG...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCACCAGGGCCTTGGCCATaGCCTCCTCACCGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPPGPWP*PPHRAA
Trigger: GGCAGCACGGTGAGGAGGCCATGGCCAAGGCCCTGG...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGGGGATGCACGATTTTaGAGAAGAGGGACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHGDARF*RRGTAC
Trigger: GCAGGCTGTCCCTCTTCTTCAAAATCGTGCATCCCC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGCTCTTCCTGGTGTGTaGATATGGCGCACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHALPGV*IWRTWL
Trigger: GAGCCAAGTGCGCCATATGCACACACCAGGAAGAGC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCGGACATGGTCTGGTATaGCCGGACAACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPGHGLV*PDNISS
Trigger: GGAAGAGATGTTGTCCGGCCATACCAGACCATGTCC...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACCGATGTCAATCAGGCTaGTTCTGTAGTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHRCQSG*FCSLGA
Trigger: TGCCCCCAGACTACAGAATCAGCCTGATTGACATCG...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGTCCACGGTCTGGAGTaGAGCCTTCATGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSVHGLE*SLHGVL
Trigger: GAGCACTCCATGAAGGCTTCACTCCAGACCGTGGAC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTAAGCCCCCGGAATTTTaGGGAGGAGCTCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SSSATPEIARPTPPLLPPKPPEF*GGAPQL
Trigger: CAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTT...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGGGCCAGGATGTCCGATaGCCGTCCACTCCCATCACA +
Preference number: 4 (lower is better)
Translates to: STHTLVSKQALGFFHGAWGQDVR*PSTPIT
Trigger: TGTGATGGGAGTGGACGGGCATCGGACATCCTGGCC...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGGGTCCGGAAGCGCTTaGGCGTGTAGTTGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFGSGSA*ACSCSD
Trigger: ATCGCTGCAACTACACGCGCAAGCGCTTCCGGACCC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCTGAGTTCTTGCGCATaGGGAGCCGGCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFLSSCA*GAGPST
Trigger: TGTGGATGGGCCGGCTCCGCATGCGCAAGAACTCAG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTCGGTGAGCAGCATCTaGCTGCACGTGTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFSVSSI*LHVCAM
Trigger: CATCGCGCACACGTGCAGCCAGATGCTGCTCACCGA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACCTGAAGGGCTGGTCTTaGAGACGAAGGATCATTCCG +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHLKGWS*RRRIIP
Trigger: CGGAATGATCCTTCGTCTCCAAGACCAGCCCTTCAG...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAAGAGGTAGCAGGCCATaGTGGCCGGCACGATCCAAG +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPRGSRP*WPARSK
Trigger: CTTGGATCGTGCCGGCCATCATGGCCTGCTACCTCT...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGGCGTCCGTGCAGTCTaGCGAGGTCCTCGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWGVRAV*RGPRAD
Trigger: ATCCGCTCGAGGACCTCGTCAGACTGCACGGACGCC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGAGCCTTCAGAAGTCTaGCAGATGGAAGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHEPSEV*QMEERL
Trigger: CAGCCTTTCTTCCATCTGTCAGACTTCTGAAGGCTC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCGAATGGAAGGTTTGTTaGGTGAGAGCTGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPEWKVC*VRAGSR
Trigger: TCTAGAGCCAGCTCTCACTCAACAAACCTTCCATTC...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCCGCTCCAGTTGTCATTaGTGCTTTGATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPRSSCH*CFDEPF
Trigger: AAAGGGCTCATCAAAGCAGCAATGACAACTGGAGCG...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGTCCTTCCACTATGAGTaGCACCACAGGAACACCTTG +
Preference number: 4 (lower is better)
Translates to: EAPGILRRSSTAASELPLSFHYE*HHRNTL
Trigger: CAAGGTGTTCCTGTGGTGGCACTCATAGTGGAAGGA...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGCCCCTTGTTTCCCCTaGTCTCATGGCTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSAPCFP*SHGFLL
Trigger: CAGCAGAAAGCCATGAGAGCAGGGGAAACAAGGGGC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTCCTGGCATGGAGCGTaGTCGAAGCCCCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFSWHGA*SKPLVS
Trigger: GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACCTGCAGCCGTGCTCATaGATACCAAATGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHLQPCS*IPNVAE
Trigger: TTCAGCCACATTTGGTATGCATGAGCACGGCTGCAG...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGATCACAGACAACCACTaGCACGGGAGGGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: STHTLVSKQALGFFHGAWITDNH*HGRGVS
Trigger: CGAGACACCCCTCCCGTGCCAGTGGTTGTCTGTGAT...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACCAGGGCCTTGGCCATaGCCTCCTCACCGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPPGPWP*PPHRAA
Trigger: GGCAGCACGGTGAGGAGGCCATGGCCAAGGCCCTGG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCGATCCATTCCTGGGTaGACGGCCAGCGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFRSIPG*TASVPS
Trigger: AGATGGAACGCTGGCCGTCCACCCAGGAATGGATCG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCATTACGATCCATTCCTaGGTGGACGGCCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSITIHS*VDGQRS
Trigger: GGAACGCTGGCCGTCCACCCAGGAATGGATCGTAAT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCAATGGCCAAGGTGTTaGCAGGGGCTGCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFQWPRC*QGLQEL
Trigger: AAGCTCCTGCAGCCCCTGCCAACACCTTGGCCATTG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGGTAGCGGCTACTTTTaGAACGCTCAATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHGSGYF*NAQWCG
Trigger: ACCACACCATTGAGCGTTCCAAAAGTAGCCGCTACC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACCGATCAGGGATGTGGTaGAATCAATGGGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHRSGMW*NQWAEH
Trigger: ATGCTCAGCCCATTGATTCCACCACATCCCTGATCG...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAGGAGGCTAAGTTGGTaGGAAGATCAGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSRRLSW*EDQAWD
Trigger: GTCCCAGGCCTGATCTTCCCACCAACTTAGCCTCCT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 72 bp TGCACAACACCTAGACCTTGGCAGACCCAAGAGGTGTaGGCTTGCCACCTCTGGGTCCCATGGCTATACAAC +
Preference number: 4 (lower is better)
Translates to: CTTPRPWQTQEV*ACHLWVPWLYN
Trigger: GTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCTGCCAAGGTCTAGGTGTTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAATTACCTTGAGGCCTaGGTTCTTGCGCATGCGGAG +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSNYLEA*VLAHAE
Trigger: CTCCGCATGCGCAAGAACTCAGGCCTCAAGGTAATT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATTCCCTTCCTGGCTGTTaGAGCTGCTCTGACGGACAA +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHSLPGC*SCSDGQ
Trigger: TTGTCCGTCAGAGCAGCTTCAACAGCCAGGAAGGGA...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGGAAGGTACTGGAGTTaGAAAGCTTGGCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFGRYWS*KAWLAQ
Trigger: CTGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATGGAAGGTACTGGAGTTaGAAAGCTTGGCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHGRYWS*KAWLAQ
Trigger: CTGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCC...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCCTTGCCTGAGCCCCTaGACCTTCTTAAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSPCLSP*TFLKQP
Trigger: TGGCTGTTTTAAGAAGGTTCAGGGGCTCAGGCAAGG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGAGATTTGGCCTTCCTaGGAATCACAGAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHEIWPS*ESQRDG
Trigger: ACCATCTCTCTGTGATTCTCAGGAAGGCCAAATCTC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCTCCGTGACCAACATCTaGGAATTGCATGAGGAATCT +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPSVTNI*ELHEES
Trigger: AGATTCCTCATGCAATTCTCAGATGTTGGTCACGGA...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCTCTTCTGAGTATTTATaGCCAAAGGCCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPSSEYL*PKARMS
Trigger: GGACATCCTGGCCTTTGGGCATAAATACTCAGAAGA...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGCCTCCTCACCGTGCTaGCAGAAGAACAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQASSPC*QKNRAI
Trigger: GATGGCCCTGTTCTTCTGGCAGCACGGTGAGGAGGC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGCAGCCACGGCAAGCTaGAGGCACGTGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKAATAS*RHVALL
Trigger: GAGCAACGCCACGTGCCTGCAGCTTGCCGTGGCTGC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGCAGCCACGGCAAGCTaGAGGCACGTGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLAATAS*RHVALL
Trigger: GAGCAACGCCACGTGCCTGCAGCTTGCCGTGGCTGC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGCAGCCACGGCAAGCTaGAGGCACGTGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRAATAS*RHVALL
Trigger: GAGCAACGCCACGTGCCTGCAGCTTGCCGTGGCTGC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGCAGCCACGGCAAGCTaGAGGCACGTGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHAATAS*RHVALL
Trigger: GAGCAACGCCACGTGCCTGCAGCTTGCCGTGGCTGC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAATAAGGTCTTCCAGCTaGGCCAGCCGGATGTCCACG +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPIRSSS*ASRMST
Trigger: CGTGGACATCCGGCTGGCGCAGCTGGAAGACCTTAT...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGGGGTGACTCAGTTCTaGTTCTCGCTCTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFGVTQF*FSLWMA
Trigger: TGCCATCCAGAGCGAGAAGCAGAACTGAGTCACCCC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCACTCCTGGGAGGATATTaGAATGGTGGCTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPLLGGY*NGGSAA
Trigger: GGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAG...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCCGGCTTGGAGGACTTaGTTCTCTGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSPAWRT*FSGRDF
Trigger: GAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGAGGCACACTGCCTGCTaGTTCGGGGAGGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLRHTAC*FGEGMH
Trigger: GTGCATCCCCTCCCCGAAGCAGCAGGCAGTGTGCCT...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCATACTCGCACATACATaGCTTTGTTGGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPILAHT*LCWNGH
Trigger: GTGGCCATTCCAACAAAGCCATGTATGTGCGAGTAT...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTTCTGCAGGCCCCCATaGACAGAGATGAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSFCRPP*TEMRSL
Trigger: CAAGCTTCTCATCTCTGTCCATGGGGGCCTGCAGAA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTGCTTGCTCATGGGATTaGACATGGTCTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: SSSATPEIARPTPPLLPPACSWD*TWSGMA
Trigger: GGCCATACCAGACCATGTCCAATCCCATGAGCAAGC...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCAGGGAGGGTCTATCTaGTCCGCAAACACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFQGGSI*SANTSP
Trigger: TGGGGAAGTGTTTGCGGACCAGATAGACCCTCCCTG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCATCGAGCGGATTTTGTTaGACTCGGCCCGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPSSGFC*TRPAPD
Trigger: GTCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGA...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAGGATATTGCAATGGTaGCTCTGCGGCCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSRILQW*LCGLWP
Trigger: AGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTGGAGAAGCTCTTCCTaGTGTGTGCATATGGCGCAC +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSWRSSS*CVHMAH
Trigger: GTGCGCCATATGCACACACCAGGAAGAGCTTCTCCA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACAGGCTTCCTGGAACTTaGAAGACTAGTCAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHRLPGT*KTSQVA
Trigger: GGCTACTTGACTAGTCTTCCAAGTTCCAGGAAGCCT...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGGTCCCCCACGGCTCTaGCATCCCATGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWGPPRL*HPMVIS
Trigger: GGAGATGACCATGGGATGCCAGAGCCGTGGGGGACC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCTCACTTCCAATCTaGCCCAGAATGAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFPSLPI*PRMRPW
Trigger: CCAAGGCCTCATTCTGGGCCAGATTGGAAGTGAGGG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTAGGAGGAGGCTAAGTTaGTGGGAAGATCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFRRRLS*WEDQAW
Trigger: CCAGGCCTGATCTTCCCACCAACTTAGCCTCCTCCT...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCGGAGATACTGGGGGTaGGGCCAACATGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLRRYWG*GQHAGL
Trigger: TAGGCCAGCATGTTGGCCTCACCCCCAGTATCTCCG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGGTTGAGTGTGTTTGCTaGTGGACCACTTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: EAPGILRRSSTAASELPLVECVC*WTTFQT
Trigger: AGTCTGAAAAGTGGTCCATCAGCAAACACACTCAAC...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTCCGTAGGGCTGAGTTaGGTGTGTTTGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFSVGLS*VCLLMD
Trigger: GTCCATCAGCAAACACACTCAACTCAGCCCTACGGA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGAAGGCATCGCCAACATaGCGAATAACACCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: EAPGILRRSSTAASELPLKASPT*RITPVL
Trigger: TAACACAGGTGTTATTCGTCATGTTGGCGATGCCTT...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTCGTTGTCAGCCAGAATaGAGTGGGAATGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSATPEIARPTPPLLPPRCQPE*SGNACC
Trigger: ACAGCATGCATTCCCACTTCATTCTGGCTGACAACG...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCTTGGCCAGTTTCCATaGTGGCTCCTCATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSLGQFP*WLLIGK
Trigger: TTTCCCAATGAGGAGCCATCATGGAAACTGGCCAAG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGAGGTAGCAGGCCATaGTGGCCGGCACGATCCAAG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLRGSRP*WPARSK
Trigger: CTTGGATCGTGCCGGCCATCATGGCCTGCTACCTCT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGTTCTCCACCCTTTCTaGAGTCACCCGTATCCTCTC +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFVLHPF*SHPYPL
Trigger: GAGAGGATACGGGTGACTTCAGAAAGGGTGGAGAAC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGTCCACGGTCTGGAGTaGAGCCTTCATGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQVHGLE*SLHGVL
Trigger: GAGCACTCCATGAAGGCTTCACTCCAGACCGTGGAC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTTCTGAGCCTGAGCACTaGTTCTGGGTACTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SSSATPEIARPTPPLLPPSEPEH*FWVLAK
Trigger: TTTTGCCAGTACCCAGAATCAGTGCTCAGGCTCAGA...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTACCACAGGAACACCTTaGCCGATTCCAACTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SSSATPEIARPTPPLLPPTTGTP*PIPTES
Trigger: AGACTCAGTTGGAATCGGTCAAGGTGTTCCTGTGGT...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp TGGCTGAGGCCTGGGGGCATCTACCCAGAGTGGGTGATCCACTGCATTGGCTTCCACCTCAGTGGTTCATaGCTTCCAAGCAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: WLRPGGIYPEWVIHCIGFHLSGS*LPSKMK
Trigger: TTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTG...GAAGCCAATGCAGTGGATCACCCACTCTGGGTAGATGCCCCCAGGCCTCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp TGGCTGAGGCCTGGGGGCATCTACCCAGAGTGGGTGATCCACTGCATTGGCTTCGCAGTTGGGTTTAACTaGCCTTTGAGAATAGTCTCT +
Preference number: 4 (lower is better)
Translates to: WLRPGGIYPEWVIHCIGFAVGFN*PLRIVS
Trigger: AGAGACTATTCTCAAAGGTCAGTTAAACCCAACTGC...GAAGCCAATGCAGTGGATCACCCACTCTGGGTAGATGCCCCCAGGCCTCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCGAGGAGCATCAGCCTaGTTCATGACCCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFRGASA*FMTPSK
Trigger: TTTGGAAGGGGTCATGAATCAGGCTGATGCTCCTCG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTGTGGGAAGCTGCGGTaGAGATGTGTAGGACTCTTG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFCGKLR*RCVGLL
Trigger: CAAGAGTCCTACACATCTTCACCGCAGCTTCCCACA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGGGATACAGTGGATCTTaGGTCCAAGCAAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: EAPGILRRSSTAASELPLGYSGS*VQAKEC
Trigger: ACATTCCTTTGCTTGGACTCAAGATCCACTGTATCC...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCAGAGGTTTATGCTCATaGATGGACACTTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPRGLCS*MDTCFA
Trigger: TGCAAAGCAAGTGTCCATTCATGAGCATAAACCTCT...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGGCCAGGATGTCCGATaGCCGTCCACTCCCATCACA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAGQDVR*PSTPIT
Trigger: TGTGATGGGAGTGGACGGGCATCGGACATCCTGGCC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGCTTGCGCGTGTAGTTaGAGCGATAAGCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAACACS*SDKPRP
Trigger: TGGGCGGGGCTTATCGCTGCAACTACACGCGCAAGC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGGGTCCGGAAGCGCTTaGGCGTGTAGTTGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAGSGSA*ACSCSD
Trigger: ATCGCTGCAACTACACGCGCAAGCGCTTCCGGACCC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCTGAGTTCTTGCGCATaGGGAGCCGGCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLLSSCA*GAGPST
Trigger: TGTGGATGGGCCGGCTCCGCATGCGCAAGAACTCAG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCTGAGTTCTTGCGCATaGGGAGCCGGCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLLSSCA*GAGPST
Trigger: TGTGGATGGGCCGGCTCCGCATGCGCAAGAACTCAG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATGTAGGCGGCGTCCGTaGAGTCTGACGAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKCRRRP*SLTRSS
Trigger: CGAGGACCTCGTCAGACTGCACGGACGCCGCCTACA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTGTAGGCGGCGTCCGTaGAGTCTGACGAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLCRRRP*SLTRSS
Trigger: CGAGGACCTCGTCAGACTGCACGGACGCCGCCTACA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACTCCTGGGAGGATATTaGAATGGTGGCTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQLLGGY*NGGSAA
Trigger: GGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCGCACTTGGCTCCTCTaGCGAGTAGCTGTTGGCGCG +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSRTWLL*RVAVGA
Trigger: CGCGCCAACAGCTACTCGGCAGAGGAGCCAAGTGCG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCGCACTTGGCTCCTCTaGCGAGTAGCTGTTGGCGCG +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLRTWLL*RVAVGA
Trigger: CGCGCCAACAGCTACTCGGCAGAGGAGCCAAGTGCG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCGCACTTGGCTCCTCTaGCGAGTAGCTGTTGGCGCG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSRTWLL*RVAVGA
Trigger: CGCGCCAACAGCTACTCGGCAGAGGAGCCAAGTGCG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTAGGCACACTGCCTGCTaGTTCGGGGAGGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSRHTAC*FGEGMH
Trigger: GTGCATCCCCTCCCCGAAGCAGCAGGCAGTGTGCCT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATGGAGGCACACTGCCTaGTGCTTCGGGGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPWRHTA*CFGEGM
Trigger: CATCCCCTCCCCGAAGCAGCAGGCAGTGTGCCTCCA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACAAGAGGTGTTGGCTTaGCACCTCTGGGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQQEVLA*HLWVPW
Trigger: CCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCACTGAATTTCCCCCTTTaGCCCATAGGCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPLNFPL*PIGLSH
Trigger: GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAG...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTGTGAGGCCAACATGCTaGCCTATCAGACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESVRPTC*PIRRPQ
Trigger: CTGTGGGCGTCTGATAGGCCAGCATGTTGGCCTCAC...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGTGCTTGAGTTTTGGCTaGAGTTCAAAGTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EAPGILRRSSTAASELPLCLSFG*SSKFCR
Trigger: CCTGCAGAACTTTGAACTCCAGCCAAAACTCAAGCA...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGGATTGGACATGGTCTaGTATGGCCGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSGLDMV*YGRTTS
Trigger: AGATGTTGTCCGGCCATACCAGACCATGTCCAATCC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAATCACAGACAACCACTaGCACGGGAGGGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQITDNH*HGRGVS
Trigger: CGAGACACCCCTCCCGTGCCAGTGGTTGTCTGTGAT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTAAAGCTAAGCTCAGTTaGTCTGGGGCCGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFKAKLS*SGAEAL
Trigger: CAATGCCTCGGCCCCAGACCAACTGAGCTTAGCTTT...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTCGGTGAGCAGCATCTaGCTGCACGTGTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWSVSSI*LHVCAM
Trigger: CATCGCGCACACGTGCAGCCAGATGCTGCTCACCGA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTCGGTGAGCAGCATCTaGCTGCACGTGTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERASVSSI*LHVCAM
Trigger: CATCGCGCACACGTGCAGCCAGATGCTGCTCACCGA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCGGCAGCACAGGTGCTaGAATATCATGGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFRQHRC*NIMVMW
Trigger: CCACATGACCATGATATTCCAGCACCTGTGCTGCCG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCATGCATATGGCGCACTTaGCTCCTCTGCCGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPCIWRT*LLCRVA
Trigger: AGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCA...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCTCGGCCCTCCGGCTTaGAGGACTTGCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLGPPA*RTCFSG
Trigger: TCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGCTGATTCTGTAGTCTaGGGGCAGGTTCCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSADSVV*GQVPLF
Trigger: AAAAAGGGGAACCTGCCCCCAGACTACAGAATCAGC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377110.9
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGAGATGCCTCCTGGCATaGAGCGTGCTCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLRCLLA*SVLEAP
Trigger: AGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCT...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGATGCCTCCTGGCATaGAGCGTGCTCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLRCLLA*SVLEAP
Trigger: AGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGTTCTTCCATGGGGCCTaGAAAGTTACCTACCCGCCT +
Preference number: 4 (lower is better)
Translates to: STHTLVSKQALGFFHGAWFFHGA*KVTYPP
Trigger: AGGCGGGTAGGTAACTTTCCAGGCCCCATGGAAGAA...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAGGCTTTGGGCCTCTTaGGGCCGAAGAGGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQRLWAS*GRRGCG
Trigger: ACCACAACCTCTTCGGCCCCAAGAGGCCCAAAGCCT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTTCAGGAGGACGTGGTaGAGCCATGCAAATGATGAC +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSFRRTW*SHANDD
Trigger: GTCATCATTTGCATGGCTCCACCACGTCCTCCTGAA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCTTTTCACAAGCCCTCTaGGTGATTCTGATGCAGAAT +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPFSQAL*VILMQN
Trigger: ATTCTGCATCAGAATCACCCAGAGGGCTTGTGAAAA...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR CAA 72 bp TCTTCAATGGAGTTTCACAAAGAAGCCCCCGGAATTTaGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSMEFHKEAPGI*RRSSTAASELP
Trigger: AGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTCTTTGTGAAACTCCATTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCGGAGATACTGGGGGTaGGGCCAACATGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSRRYWG*GQHAGL
Trigger: TAGGCCAGCATGTTGGCCTCACCCCCAGTATCTCCG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACGGAGATACTGGGGGTaGGGCCAACATGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKRRYWG*GQHAGL
Trigger: TAGGCCAGCATGTTGGCCTCACCCCCAGTATCTCCG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATAGAGGTAGCAGGCCATaGTGGCCGGCACGATCCAAG +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDRGSRP*WPARSK
Trigger: CTTGGATCGTGCCGGCCATCATGGCCTGCTACCTCT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGTCCACGGTCTGGAGTaGAGCCTTCATGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLVHGLE*SLHGVL
Trigger: GAGCACTCCATGAAGGCTTCACTCCAGACCGTGGAC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGTACATCGGAGGCTCTaGGTCCCAGGGGTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLVHRRL*VPGVLA
Trigger: TGCCAAAACCCCTGGGACTCAGAGCCTCCGATGTAC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGTACATCGGAGGCTCTaGGTCCCAGGGGTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAVHRRL*VPGVLA
Trigger: TGCCAAAACCCCTGGGACTCAGAGCCTCCGATGTAC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCACCTGCCCAGCAAGTGTaGACATGCCTTAAATCCCCT +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPPAQQV*TCLKSP
Trigger: AGGGGATTTAAGGCATGTTCACACTTGCTGGGCAGG...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTAAATCCTGTGGTCCGTaGCCAACATCTGAGAATTGC +
Preference number: 4 (lower is better)
Translates to: SSSATPEIARPTPPLLPPKSCGP*PTSENC
Trigger: GCAATTCTCAGATGTTGGTCACGGACCACAGGATTT...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGTTGGGAAGCTCCAACTaGCATTCCTTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: STHTLVSKQALGFFHGAWLGSSN*HSLVIR
Trigger: CCTGATGACCAAGGAATGGCAGTTGGAGCTTCCCAA...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTTGGGAAGCTCCAACTaGCATTCCTTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFLGSSN*HSLVIR
Trigger: CCTGATGACCAAGGAATGGCAGTTGGAGCTTCCCAA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCGCTCCAGTTGTCATTaGTGCTTTGATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSRSSCH*CFDEPF
Trigger: AAAGGGCTCATCAAAGCAGCAATGACAACTGGAGCG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGGCCAGGATGTCCGATaGCCGTCCACTCCCATCACA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRGQDVR*PSTPIT
Trigger: TGTGATGGGAGTGGACGGGCATCGGACATCCTGGCC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGGCCAGGATGTCCGATaGCCGTCCACTCCCATCACA +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDGQDVR*PSTPIT
Trigger: TGTGATGGGAGTGGACGGGCATCGGACATCCTGGCC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGCTTGCGCGTGTAGTTaGAGCGATAAGCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRACACS*SDKPRP
Trigger: TGGGCGGGGCTTATCGCTGCAACTACACGCGCAAGC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGCTTGCGCGTGTAGTTaGAGCGATAAGCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPACACS*SDKPRP
Trigger: TGGGCGGGGCTTATCGCTGCAACTACACGCGCAAGC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGCCTCCTCACCGTGCTaGCAGAAGAACAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSASSPC*QKNRAI
Trigger: GATGGCCCTGTTCTTCTGGCAGCACGGTGAGGAGGC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGCCTCCTCACCGTGCTaGCAGAAGAACAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKASSPC*QKNRAI
Trigger: GATGGCCCTGTTCTTCTGGCAGCACGGTGAGGAGGC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCTGAGTTCTTGCGCATaGGGAGCCGGCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLSSCA*GAGPST
Trigger: TGTGGATGGGCCGGCTCCGCATGCGCAAGAACTCAG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATCATCGGCAGCACAGGTaGTGGAATATCATGGTCATG +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHHRQHR*WNIMVM
Trigger: CATGACCATGATATTCCAGCACCTGTGCTGCCGATG...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCATAAGGTCTTCCAGCTaGGCCAGCCGGATGTCCACG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLIRSSS*ASRMST
Trigger: CGTGGACATCCGGCTGGCGCAGCTGGAAGACCTTAT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTATAAGGTCTTCCAGCTaGGCCAGCCGGATGTCCACG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAIRSSS*ASRMST
Trigger: CGTGGACATCCGGCTGGCGCAGCTGGAAGACCTTAT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTGTAGGCGGCGTCCGTaGAGTCTGACGAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMCRRRP*SLTRSS
Trigger: CGAGGACCTCGTCAGACTGCACGGACGCCGCCTACA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCATGGTCTCCTCACCTaGAGGGTCTATACTCTCTTG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFHGLLT*RVYTLL
Trigger: CAAGAGAGTATAGACCCTGCAGGTGAGGAGACCATG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACAGCTTTGGGTTCTTTTaGTACAGAGTGGGAACTAGT +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHSFGFF*YRVGTS
Trigger: ACTAGTTCCCACTCTGTAGCAAAAGAACCCAAAGCT...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCTCCTGGGAGGATATTaGAATGGTGGCTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLLGGY*NGGSAA
Trigger: GGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCGGAGCAGCTCCTGTTaGTTTCATTTTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFRSSSC*FHFAAA
Trigger: AGCTGCAGCAAAATGAAAGCAACAGGAGCTGCTCCG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377105.5
CDS-3UTR GCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCTGGGTCAGATCAAATaGTTTCTTGATCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSLGQIK*FLDLWP
Trigger: GGGCCACAGATCAAGAAAGCATTTGATCTGACCCAG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCAAGAGGTGTTGGCTTaGCACCTCTGGGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAQEVLA*HLWVPW
Trigger: CCATGGGACCCAGAGGTGGCAAGCCAACACCTCTTG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTCCACAGCAACACCTATaGGGGTCTTTGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESPQQHL*GSLVLG
Trigger: ACCCAGCACCAAAGACCCCCATAGGTGTTGCTGTGG...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGTGAGGCCAACATGCTaGCCTATCAGACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLVRPTC*PIRRPQ
Trigger: CTGTGGGCGTCTGATAGGCCAGCATGTTGGCCTCAC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAATGAGGTCCTCCTaGTTTTCCACAATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFPMRSS*FSTIPQ
Trigger: CTGGGGAATTGTGGAAAACCAGGAGGACCTCATTGG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAGCTTGCTCATGGGATTaGACATGGTCTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPACSWD*TWSGMA
Trigger: GGCCATACCAGACCATGTCCAATCCCATGAGCAAGC...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTATCACAGACAACCACTaGCACGGGAGGGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAITDNH*HGRGVS
Trigger: CGAGACACCCCTCCCGTGCCAGTGGTTGTCTGTGAT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCTAAGGCATCCAACATaGCTTGCTCCAGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFLRHPT*LAPEIP
Trigger: TGGGATCTCTGGAGCAAGCCATGTTGGATGCCTTAG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGAATATCATCCCTCTTaGGGCCGAAGAGGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFEYHPS*GRRGCG
Trigger: ACCACAACCTCTTCGGCCCCAAGAGGGATGATATTC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360823.6
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAAAGGGAAGGGGAAGTaGTTGATCTCAGGATCATCC +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSKGKGK*LISGSS
Trigger: GGATGATCCTGAGATCAACCACTTCCCCTTCCCTTT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTCCAGGGCCTTGGCCATaGCCTCCTCACCGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIPGPWP*PPHRAA
Trigger: GGCAGCACGGTGAGGAGGCCATGGCCAAGGCCCTGG...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACAAGCTGCAGGCACGTaGCGTTGCTCCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQQAAGT*RCSSSS
Trigger: TGAAGAACTGGAGCAACGCCACGTGCCTGCAGCTTG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTCGAGCGGATTTTGTTaGACTCGGCCCGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWSSGFC*TRPAPD
Trigger: GTCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCAATGGCCAAGGTGTTaGCAGGGGCTGCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLQWPRC*QGLQEL
Trigger: AAGCTCCTGCAGCCCCTGCCAACACCTTGGCCATTG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAATCAATGCTCCGGCTTaGAGGTCTGTCTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQINAPA*RSVCGC
Trigger: GCACCCACAGACAGACCTCCAAGCCGGAGCATTGAT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCAGGCACCCCAAAGTTaGCATAATAGCTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFQAPQS*HNSSLR
Trigger: CCTCAAGGAGCTATTATGCCAACTTTGGGGTGCCTG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCCTGGTGTGTGCATATaGCGCACTTGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAPGVCI*RTWLLC
Trigger: GCAGAGGAGCCAAGTGCGCCATATGCACACACCAGG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCCTGGTGTGTGCATATaGCGCACTTGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLPGVCI*RTWLLC
Trigger: GCAGAGGAGCCAAGTGCGCCATATGCACACACCAGG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCCTGGTGTGTGCATATaGCGCACTTGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWPGVCI*RTWLLC
Trigger: GCAGAGGAGCCAAGTGCGCCATATGCACACACCAGG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACTCGGCCCTCCGGCTTaGAGGACTTGCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKLGPPA*RTCFSG
Trigger: TCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCTCGGCCCTCCGGCTTaGAGGACTTGCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSLGPPA*RTCFSG
Trigger: TCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCTGTGTCTGGCACTaGGTCAGATCAAATGCTTTC +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFPCVWH*VRSNAF
Trigger: GAAAGCATTTGATCTGACCCAGTGCCAGACACAGGG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATAGATGCCTCCTGGCATaGAGCGTGCTCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHRCLLA*SVLEAP
Trigger: AGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCT...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGAGATGCCTCCTGGCATaGAGCGTGCTCGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRRCLLA*SVLEAP
Trigger: AGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACAGTGGTGTGAAAAATTaGCAGTTACGTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHSGVKN*QLRLGG
Trigger: ACCTCCAAGACGTAACTGCCAATTTTTCACACCACT...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACCCTCACTTCCAATCTaGCCCAGAATGAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQPSLPI*PRMRPW
Trigger: CCAAGGCCTCATTCTGGGCCAGATTGGAAGTGAGGG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGGGACTGAATGCTGCTaGCAGACATGTTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFGTECC*QTCLFG
Trigger: GCCAAACAAACATGTCTGCCAGCAGCATTCAGTCCC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTGTCAGGGGTCTTCAATaGAGTTTCACAAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SSSATPEIARPTPPLLPPVRGLQ*SFTKKP
Trigger: GGGCTTCTTTGTGAAACTCCATTGAAGACCCCTGAC...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTTCCGTAGGGCTGAGTTaGGTGTGTTTGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESSVGLS*VCLLMD
Trigger: GTCCATCAGCAAACACACTCAACTCAGCCCTACGGA...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTCCCAAAGACTTGCTTaGGTTTTGGCTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSSQRLA*VLAGVQ
Trigger: TTGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAAGGCATCGCCAACATaGCGAATAACACCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSKASPT*RITPVL
Trigger: TAACACAGGTGTTATTCGTCATGTTGGCGATGCCTT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGGCGTCCGTGCAGTCTaGCGAGGTCCTCGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIGVRAV*RGPRAD
Trigger: ATCCGCTCGAGGACCTCGTCAGACTGCACGGACGCC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTCCCTTCCTGGCTGTTaGAGCTGCTCTGACGGACAA +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLSLPGC*SCSDGQ
Trigger: TTGTCCGTCAGAGCAGCTTCAACAGCCAGGAAGGGA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGTACATCGGAGGCTCTaGGTCCCAGGGGTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSVHRRL*VPGVLA
Trigger: TGCCAAAACCCCTGGGACTCAGAGCCTCCGATGTAC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGGACAGGGTTCTCTCTaGGTTATCACCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLGQGSL*VITLLG
Trigger: TCCCAGGAGGGTGATAACTCAGAGAGAACCCTGTCC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTACAGAAGTGTTGGCATaGGAAGGATGTGGGACGTTA +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFTEVLA*EGCGTL
Trigger: TAACGTCCCACATCCTTCTCATGCCAACACTTCTGT...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTTGTGGCACCAGAAGTaGATAGATAAGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSLWHQK*IDKRQV
Trigger: CACCTGTCTCTTATCTATTCACTTCTGGTGCCACAA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGGCTGAGGCCTGGGGGCATCTACCCAGAGTGGGTGATCCACTGCATTGGCTTCAAACATCACTGGTTTTaGGTCTTAGCTCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: WLRPGGIYPEWVIHCIGFKHHWF*VLAPHL
Trigger: TAAATGAGGAGCTAAGACTCAAAACCAGTGATGTTT...GAAGCCAATGCAGTGGATCACCCACTCTGGGTAGATGCCCCCAGGCCTCAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATGCACAACACACGACATaGACGGTGAGAACAGAACAT +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHAQHTT*TVRTEH
Trigger: ATGTTCTGTTCTCACCGTTCATGTCGTGTGTTGTGC...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACTTCCAATCCAGATTCTaGTCTAGAAGATTATGCCTC +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHFQSRF*SRRLCL
Trigger: GAGGCATAATCTTCTAGATCAGAATCTGGATTGGAA...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGGGCTGAGCATAAGCTaGCTGCACAAGGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLGLSIS*LHKATE
Trigger: TTCTGTGGCCTTGTGCAGTCAGCTTATGCTCAGCCC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTGGACGAGGTCAATGTaGACACCAGCCGGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSWTRSM*TPAGVE
Trigger: CTCTACCCCGGCTGGTGTTCACATTGACCTCGTCCA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGCATCCAACATGGCTTaGTCCAGAGATCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRASNMA*SRDPTG
Trigger: GCCGGTGGGATCTCTGGAGCAAGCCATGTTGGATGC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGCATCCAACATGGCTTaGTCCAGAGATCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSASNMA*SRDPTG
Trigger: GCCGGTGGGATCTCTGGAGCAAGCCATGTTGGATGC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGCATCCAACATGGCTTaGTCCAGAGATCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHASNMA*SRDPTG
Trigger: GCCGGTGGGATCTCTGGAGCAAGCCATGTTGGATGC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGCTTGCGCGTGTAGTTaGAGCGATAAGCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMACACS*SDKPRP
Trigger: TGGGCGGGGCTTATCGCTGCAACTACACGCGCAAGC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGGAAAAAGGATGGCTTaGCTGGCGACCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWGKRMA*LATPKL
Trigger: GAGCTTTGGGGTCGCCAGGCAAGCCATCCTTTTTCC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGGAAAAAGGATGGCTTaGCTGGCGACCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLGKRMA*LATPKL
Trigger: GAGCTTTGGGGTCGCCAGGCAAGCCATCCTTTTTCC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGGGGTGACTCAGTTCTaGTTCTCGCTCTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWGVTQF*FSLWMA
Trigger: TGCCATCCAGAGCGAGAAGCAGAACTGAGTCACCCC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGCTCTTCCTGGTGTGTaGATATGGCGCACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLALPGV*IWRTWL
Trigger: GAGCCAAGTGCGCCATATGCACACACCAGGAAGAGC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTCTCTTCCCCCTCCCTaGCCAGCAAGTGTGAACATG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWSLPPP*PASVNM
Trigger: CATGTTCACACTTGCTGGGCAGGGAGGGGGAAGAGA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCTCTCTTCCCCCTCCCTaGCCAGCAAGTGTGAACATG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLSLPPP*PASVNM
Trigger: CATGTTCACACTTGCTGGGCAGGGAGGGGGAAGAGA...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGCCCCTTGTTTCCCCTaGTCTCATGGCTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLAPCFP*SHGFLL
Trigger: CAGCAGAAAGCCATGAGAGCAGGGGAAACAAGGGGC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTCCTGGCATGGAGCGTaGTCGAAGCCCCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLSWHGA*SKPLVS
Trigger: GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCACTGCAGCCGTGCTCATaGATACCAAATGTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPLQPCS*IPNVAE
Trigger: TTCAGCCACATTTGGTATGCATGAGCACGGCTGCAG...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATCACCTCCCCTCTCTCTaGAGCCGTGCTCATGCATAC +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHHLPSL*SRAHAY
Trigger: GTATGCATGAGCACGGCTGCAGAGAGAGGGGAGGTG...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAAGCACACAAACATTGTaGAAACGCACAAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPSTQTL*KRTRAC
Trigger: GCAGGCCCTTGTGCGTTTGCACAATGTTTGTGTGCT...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTTGGCCCCTGGAACCCTaGCTCTCAGCTGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSWPLEP*LSAERT
Trigger: GGTCCTCTCAGCTGAGAGGCAGGGTTCCAGGGGCCA...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCCACAGCAACACCTATaGGGGTCTTTGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWPQQHL*GSLVLG
Trigger: ACCCAGCACCAAAGACCCCCATAGGTGTTGCTGTGG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGACCACTTTTCAGACTaGATGTCATTTCGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFDHFSD*MSFRER
Trigger: CCTCTCCCGAAATGACATCCAGTCTGAAAAGTGGTC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGATGGCTTTGTTGGAATaGCCACCTCCTTGGAACTCA +
Preference number: 4 (lower is better)
Translates to: STHTLVSKQALGFFHGAWMALLE*PPPWNS
Trigger: TGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCAT...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGCCAACTGCCATTCCTTaGTCATCAGGTGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: STHTLVSKQALGFFHGAWPTAIP*SSGVRG
Trigger: TCCTCTTACACCTGATGACCAAGGAATGGCAGTTGG...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTGCTTGAGTTTTGGCTaGAGTTCAAAGTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSCLSFG*SSKFCR
Trigger: CCTGCAGAACTTTGAACTCCAGCCAAAACTCAAGCA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTGGACATGGTCTGGTATaGCCGGACAACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESGHGLV*PDNISS
Trigger: GGAAGAGATGTTGTCCGGCCATACCAGACCATGTCC...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCTTCTTCACGTTTCTTaGTTGTCTTTCTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSLLHVS*LSFFLA
Trigger: GGCGAGGAAGAAAGACAACCAAGAAACGTGAAGAAG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAGCTCCACAGCCAGCTaGCCAAAGTCTCTGGAATTG +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQSSTAS*PKSLEL
Trigger: CAATTCCAGAGACTTTGGCCAGCTGGCTGTGGAGCT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCAAGCTGCAGGCACGTaGCGTTGCTCCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWQAAGT*RCSSSS
Trigger: TGAAGAACTGGAGCAACGCCACGTGCCTGCAGCTTG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCAAGCTGCAGGCACGTaGCGTTGCTCCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAQAAGT*RCSSSS
Trigger: TGAAGAACTGGAGCAACGCCACGTGCCTGCAGCTTG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCGGTGAGCAGCATCTaGCTGCACGTGTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSVSSI*LHVCAM
Trigger: CATCGCGCACACGTGCAGCCAGATGCTGCTCACCGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCGATCCATTCCTGGGTaGACGGCCAGCGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDRSIPG*TASVPS
Trigger: AGATGGAACGCTGGCCGTCCACCCAGGAATGGATCG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACATTGGGAAAAAGGATaGCTTGCCTGGCGACCCCAA +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQHWEKG*LAWRPQ
Trigger: TTGGGGTCGCCAGGCAAGCCATCCTTTTTCCCAATG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCAGGGAGGGTCTATCTaGTCCGCAAACACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLQGGSI*SANTSP
Trigger: TGGGGAAGTGTTTGCGGACCAGATAGACCCTCCCTG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATCGAGCGGATTTTGTTaGACTCGGCCCGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKSSGFC*TRPAPD
Trigger: GTCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTCTTTTGCTACAGAGTaGGAACTAGTAGCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFSFATE*ELVARC
Trigger: ACACCGGGCTACTAGTTCCCACTCTGTAGCAAAAGA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCAATGGCCAAGGTGTTaGCAGGGGCTGCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRQWPRC*QGLQEL
Trigger: AAGCTCCTGCAGCCCCTGCCAACACCTTGGCCATTG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCAATGGCCAAGGTGTTaGCAGGGGCTGCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSQWPRC*QGLQEL
Trigger: AAGCTCCTGCAGCCCCTGCCAACACCTTGGCCATTG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGAACGCTCAATGGTGTaGTACATCGGAGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQERSMV*YIGGSE
Trigger: CTCAGAGCCTCCGATGTACCACACCATTGAGCGTTC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCTGCCGAGTAGCTGTTaGCGCGCTCTATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERALPSSC*RALSWE
Trigger: TTCCCAAGATAGAGCGCGCCAACAGCTACTCGGCAG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCCTGGTGTGTGCATATaGCGCACTTGGCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLPGVCI*RTWLLC
Trigger: GCAGAGGAGCCAAGTGCGCCATATGCACACACCAGG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTTCTCTGGCTGAGGCCTaGGGGCATCTACCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: DQAEAFSRRGPILSLQLISLAEA*GHLPRV
Trigger: CACTCTGGGTAGATGCCCCCAGGCCTCAGCCAGAGA...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCCAAATGTGGCTGAATaGAGGCACACTGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWPNVAE*RHTACC
Trigger: GCAGCAGGCAGTGTGCCTCCATTCAGCCACATTTGG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGGCTCTGGCATCCCATaGTCATCTCCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWGSGIP*SSPHLQ
Trigger: TTGCAGGTGTGGAGATGACCATGGGATGCCAGAGCC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTAGGCTTTGGGCCTCTTaGGGCCGAAGAGGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLRLWAS*GRRGCG
Trigger: ACCACAACCTCTTCGGCCCCAAGAGGCCCAAAGCCT...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGCAGTTTCAAGGCTTTaGGCCTCTTGGGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAAVSRL*ASWGRR
Trigger: TCTTCGGCCCCAAGAGGCCCAAAGCCTTGAAACTGC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGCAGTTTCAAGGCTTTaGGCCTCTTGGGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLAVSRL*ASWGRR
Trigger: TCTTCGGCCCCAAGAGGCCCAAAGCCTTGAAACTGC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACTGGTCATGTGATGAGTaGTGTGAAAAATTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHWSCDE*CEKLAV
Trigger: AACTGCCAATTTTTCACACCACTCATCACATGACCA...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAATTGGCTTGCCACCTCTaGGTCCCATGGCTATACAAC +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQLACHL*VPWLYN
Trigger: GTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAA...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAAGACCCAAGAGGTGTTaGCTTGCCACCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKRPKRC*LATSGS
Trigger: GGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCTCCAGAGGAAGGCATaGGTCCTGATTGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLQRKA*VLIGTD
Trigger: GTCAGTGCCAATCAGGACCCATGCCTTCCTCTGGAG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGAGGAGGCTAAGTTGGTaGGAAGATCAGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWRRLSW*EDQAWD
Trigger: GTCCCAGGCCTGATCTTCCCACCAACTTAGCCTCCT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAGGGACTGAATGCTGCTaGCAGACATGTTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPGTECC*QTCLFG
Trigger: GCCAAACAAACATGTCTGCCAGCAGCATTCAGTCCC...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCGTCAAAAGTTATACATaGATTTTTGACCACATGGGG +
Preference number: 4 (lower is better)
Translates to: HSCLRAAFVGESQAERRPVKSYT*IFDHMG
Trigger: CCCCATGTGGTCAAAAATCCATGTATAACTTTTGAC...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGCACAAAACAGCCTGTaGTCGGAGTCAAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQAQNSL*SESKQP
Trigger: AGGCTGCTTTGACTCCGACCACAGGCTGTTTTGTGC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTCGGAGATACTGGGGGTaGGGCCAACATGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSRRYWG*GQHAGL
Trigger: TAGGCCAGCATGTTGGCCTCACCCCCAGTATCTCCG...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGTCATTTTTCTCATTCTaGAGCACGGAGATACTGGGG +
Preference number: 4 (lower is better)
Translates to: STHTLVSKQALGFFHGAWSFFSF*STEILG
Trigger: CCCCAGTATCTCCGTGCTTCAGAATGAGAAAAATGA...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGTTGAGTGTGTTTGCTaGTGGACCACTTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFVECVC*WTTFQT
Trigger: AGTCTGAAAAGTGGTCCATCAGCAAACACACTCAAC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTCCGTAGGGCTGAGTTaGGTGTGTTTGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLSVGLS*VCLLMD
Trigger: GTCCATCAGCAAACACACTCAACTCAGCCCTACGGA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTCCGTAGGGCTGAGTTaGGTGTGTTTGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWSVGLS*VCLLMD
Trigger: GTCCATCAGCAAACACACTCAACTCAGCCCTACGGA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCCCCATGGACAGAGATaGGAAGCTTGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRPHGQR*EAWEAP
Trigger: TGGAGCTTCCCAAGCTTCTCATCTCTGTCCATGGGG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACCCCATGGACAGAGATaGGAAGCTTGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKPHGQR*EAWEAP
Trigger: TGGAGCTTCCCAAGCTTCTCATCTCTGTCCATGGGG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATCCCCATGGACAGAGATaGGAAGCTTGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHPHGQR*EAWEAP
Trigger: TGGAGCTTCCCAAGCTTCTCATCTCTGTCCATGGGG...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCCCCATGGACAGAGATaGGAAGCTTGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDPHGQR*EAWEAP
Trigger: TGGAGCTTCCCAAGCTTCTCATCTCTGTCCATGGGG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCGAGACTTAGAGGCATaGTCCTTCAAGGCATCGCCA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLRDLEA*SFKASP
Trigger: TGGCGATGCCTTGAAGGATCATGCCTCTAAGTCTCG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGACCACAGGAACACCTTaGCCGATTCTTGTGTTTATC +
Preference number: 4 (lower is better)
Translates to: STHTLVSKQALGFFHGAWTTGTP*PILVFI
Trigger: GATAAACACAAGAATCGGTCAAGGTGTTCCTGTGGT...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGTCCTGGTGTCCTTCTaGTCCCATCCGAAATACCGT +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAVLVSF*SHPKYR
Trigger: ACGGTATTTCGGATGGGATCAGAAGGACACCAGGAC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGTGGTACAATGTATTTaGGGGCCCATGTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFVVQCI*GPMSRI
Trigger: AATACGAGACATGGGCCCTCAAATACATTGTACCAC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTCCCTTCCTGGCTGTTaGAGCTGCTCTGACGGACAA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSLPGC*SCSDGQ
Trigger: TTGTCCGTCAGAGCAGCTTCAACAGCCAGGAAGGGA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTACTCTCTTGGAGCTTaGAGGTGTTCCCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAYSLGA*RCSLPG
Trigger: GCCAGGAAGGGAACACCTTCAAGCTCCAAGAGAGTA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATGATGTCTATACACGATaGTGGTCTTCTGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHDVYTR*WSSGIR
Trigger: CCTGATTCCAGAAGACCATCATCGTGTATAGACATC...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGGAAGGTACTGGAGTTaGAAAGCTTGGCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRGRYWS*KAWLAQ
Trigger: CTGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGGAAGGTACTGGAGTTaGAAAGCTTGGCTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSGRYWS*KAWLAQ
Trigger: CTGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTGCATAGGCACTACTTaGAGGGGCTGTGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLCIGTT*RGCGRY
Trigger: GTACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGGACAGGGTTCTCTCTaGGTTATCACCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPGQGSL*VITLLG
Trigger: TCCCAGGAGGGTGATAACTCAGAGAGAACCCTGTCC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTTCTGAGCCTGAGCACTaGTTCTGGGTACTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESSEPEH*FWVLAK
Trigger: TTTTGCCAGTACCCAGAATCAGTGCTCAGGCTCAGA...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGGGCTGAGCATAAGCTaGCTGCACAAGGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLGLSIS*LHKATE
Trigger: TTCTGTGGCCTTGTGCAGTCAGCTTATGCTCAGCCC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACATAGAGCATGATGGATaGCCGGGTAATATTTATCAT +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHIEHDG*PGNIYH
Trigger: ATGATAAATATTACCCGGTCATCCATCATGCTCTAT...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAATCCAGGCACAAGGCTaGATTTCCCCCTTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKIQAQG*ISPFAP
Trigger: TGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGAT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGCCCCTCCATGTGTTTaGATTTGCAGCCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLAPPCV*ICSLSV
Trigger: GACTGAGAGGCTGCAAATTCAAACACATGGAGGGGC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGTACTACATCTTTTTGTaGGAGAGGCTAGTTTGTGAA +
Preference number: 4 (lower is better)
Translates to: EAPGILRRSSTAASELPLYYIFL*ERLVCE
Trigger: TTCACAAACTAGCCTCTCTCACAAAAAGATGTAGTA...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCACGCTCCAGTTGTCATTaGTGCTTTGATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPRSSCH*CFDEPF
Trigger: AAAGGGCTCATCAAAGCAGCAATGACAACTGGAGCG...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTGGCCAGGATGTCCGATaGCCGTCCACTCCCATCACA +
Preference number: 4 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSGQDVR*PSTPIT
Trigger: TGTGATGGGAGTGGACGGGCATCGGACATCCTGGCC...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGGAAAAAGGATGGCTTaGCTGGCGACCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSGKRMA*LATPKL
Trigger: GAGCTTTGGGGTCGCCAGGCAAGCCATCCTTTTTCC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGGAAAAAGGATGGCTTaGCTGGCGACCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKGKRMA*LATPKL
Trigger: GAGCTTTGGGGTCGCCAGGCAAGCCATCCTTTTTCC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGAAGCCTTCATGGAGTaGTCTCTCTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQEAFME*SLSLTS
Trigger: GGAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGATAAGGTCTTCCAGCTaGGCCAGCCGGATGTCCACG +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMIRSSS*ASRMST
Trigger: CGTGGACATCCGGCTGGCGCAGCTGGAAGACCTTAT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAGCTTTGGGTTCTTTTaGTACAGAGTGGGAACTAGT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSSFGFF*YRVGTS
Trigger: ACTAGTTCCCACTCTGTAGCAAAAGAACCCAAAGCT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGGGGTGACTCAGTTCTaGTTCTCGCTCTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKGVTQF*FSLWMA
Trigger: TGCCATCCAGAGCGAGAAGCAGAACTGAGTCACCCC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGGGGTGACTCAGTTCTaGTTCTCGCTCTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLGVTQF*FSLWMA
Trigger: TGCCATCCAGAGCGAGAAGCAGAACTGAGTCACCCC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTGCAATGGTGGCTCTaGGGCCTTTGGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLQWWL*GLWPHS
Trigger: AGAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCTCCTGGGAGGATATTaGAATGGTGGCTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMLLGGY*NGGSAA
Trigger: GGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTCGCACTTGGCTCCTCTaGCGAGTAGCTGTTGGCGCG +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIRTWLL*RVAVGA
Trigger: CGCGCCAACAGCTACTCGGCAGAGGAGCCAAGTGCG...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGCTCTTCCTGGTGTGTaGATATGGCGCACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSALPGV*IWRTWL
Trigger: GAGCCAAGTGCGCCATATGCACACACCAGGAAGAGC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGCTCTTCCTGGTGTGTaGATATGGCGCACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLALPGV*IWRTWL
Trigger: GAGCCAAGTGCGCCATATGCACACACCAGGAAGAGC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCCGGCTTGGAGGACTTaGTTCTCTGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAPAWRT*FSGRDF
Trigger: GAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTCTCTTCCCCCTCCCTaGCCAGCAAGTGTGAACATG +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSLPPP*PASVNM
Trigger: CATGTTCACACTTGCTGGGCAGGGAGGGGGAAGAGA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGCCCCTTGTTTCCCCTaGTCTCATGGCTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSAPCFP*SHGFLL
Trigger: CAGCAGAAAGCCATGAGAGCAGGGGAAACAAGGGGC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTTAGGTAGAACTGCTTaGTGCCGGCTTATACTGAAT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSLGRTA*CRLILN
Trigger: ATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATTCAATGCCACATTGCTaGACAGAGAACCCAGAAATG +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHSMPHC*TENPEM
Trigger: CATTTCTGGGTTCTCTGTGCAGCAATGTGGCATTGA...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAAGGCCACAGAATCAATaGCACATTGCTGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPRPQNQ*HIAAQR
Trigger: TCTCTGTGCAGCAATGTGGCATTGATTCTGTGGCCT...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGATCAGGAACAAAAATaGCCGGTTCACAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSDQEQK*PVHKDA
Trigger: AGCATCTTTGTGAACCGGGCATTTTTGTTCCTGATC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTTTAGAACCACCCAGTaGTTCATCAGACACCCAAAC +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFFRTTQ*FIRHPN
Trigger: GTTTGGGTGTCTGATGAAGCACTGGGTGGTTCTAAA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACATGTGTATTCTGTCATaGCTTACTTACAAACCCTAC +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHMCILS*LTYKPY
Trigger: GTAGGGTTTGTAAGTAAGGCATGACAGAATACACAT...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGAATGGACACTTGCTTTaGATGGAATATCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: EAPGILRRSSTAASELPLNGHLL*MEYPKK
Trigger: TTTCTTGGGATATTCCATGCAAAGCAAGTGTCCATT...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGTGAGGCCAACATGCTaGCCTATCAGACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMVRPTC*PIRRPQ
Trigger: CTGTGGGCGTCTGATAGGCCAGCATGTTGGCCTCAC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGACTTGCTTGAGTTTTaGCTGGAGTTCAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSDLLEF*LEFKVL
Trigger: CAGAACTTTGAACTCCAGCCAAAACTCAAGCAAGTC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTCCAATGAGGTCCTCCTaGTTTTCCACAATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESPMRSS*FSTIPQ
Trigger: CTGGGGAATTGTGGAAAACCAGGAGGACCTCATTGG...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACCAATGAGGTCCTCCTaGTTTTCCACAATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQPMRSS*FSTIPQ
Trigger: CTGGGGAATTGTGGAAAACCAGGAGGACCTCATTGG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTGGATTGGACATGGTCTaGTATGGCCGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESGLDMV*YGRTTS
Trigger: AGATGTTGTCCGGCCATACCAGACCATGTCCAATCC...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGCTTGCTCATGGGATTaGACATGGTCTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLACSWD*TWSGMA
Trigger: GGCCATACCAGACCATGTCCAATCCCATGAGCAAGC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGATCACAGACAACCACTaGCACGGGAGGGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMITDNH*HGRGVS
Trigger: CGAGACACCCCTCCCGTGCCAGTGGTTGTCTGTGAT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGAAAGCTAAGCTCAGTTaGTCTGGGGCCGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLKAKLS*SGAEAL
Trigger: CAATGCCTCGGCCCCAGACCAACTGAGCTTAGCTTT...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAAAGCTAAGCTCAGTTaGTCTGGGGCCGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLKAKLS*SGAEAL
Trigger: CAATGCCTCGGCCCCAGACCAACTGAGCTTAGCTTT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATCTTCTTCACGTTTCTTaGTTGTCTTTCTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHLLHVS*LSFFLA
Trigger: GGCGAGGAAGAAAGACAACCAAGAAACGTGAAGAAG...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCACACCATGAGCTCATaGAAAGGGAAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLHTMSS*KGKGKW
Trigger: CCACTTCCCCTTCCCTTTCCATGAGCTCATGGTGTG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCACACCATGAGCTCATaGAAAGGGAAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLHTMSS*KGKGKW
Trigger: CCACTTCCCCTTCCCTTTCCATGAGCTCATGGTGTG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTAGCTCCACAGCCAGCTaGCCAAAGTCTCTGGAATTG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERASSTAS*PKSLEL
Trigger: CAATTCCAGAGACTTTGGCCAGCTGGCTGTGGAGCT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCAAGCTGCAGGCACGTaGCGTTGCTCCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLQAAGT*RCSSSS
Trigger: TGAAGAACTGGAGCAACGCCACGTGCCTGCAGCTTG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGATTACGATCCATTCCTaGGTGGACGGCCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRITIHS*VDGQRS
Trigger: GGAACGCTGGCCGTCCACCCAGGAATGGATCGTAAT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCTGAAGGGCTGGTCTTaGAGACGAAGGATCATTCCG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLLKGWS*RRRIIP
Trigger: CGGAATGATCCTTCGTCTCCAAGACCAGCCCTTCAG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTCACTCCTGAAGGGCTaGTCTTGGAGACGAAGGATC +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLSLLKG*SWRRRI
Trigger: GATCCTTCGTCTCCAAGACCAGCCCTTCAGGAGTGA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCAGGGAGGGTCTATCTaGTCCGCAAACACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLQGGSI*SANTSP
Trigger: TGGGGAAGTGTTTGCGGACCAGATAGACCCTCCCTG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATCAGGGAGGGTCTATCTaGTCCGCAAACACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHQGGSI*SANTSP
Trigger: TGGGGAAGTGTTTGCGGACCAGATAGACCCTCCCTG...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTTGCAGGGAGGCAGCTaGATTATTTTACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFLQGGS*IILPSS
Trigger: AGAGGATGGTAAAATAATCCAGCTGCCTCCCTGCAA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGGCAGCACAGGTGCTaGAATATCATGGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERARQHRC*NIMVMW
Trigger: CCACATGACCATGATATTCCAGCACCTGTGCTGCCG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCGGATGTCCACGGTCTaGAGTGAAGCCTTCATGGAG +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSRMSTV*SEAFME
Trigger: CTCCATGAAGGCTTCACTCCAGACCGTGGACATCCG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCGGATGTCCACGGTCTaGAGTGAAGCCTTCATGGAG +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDRMSTV*SEAFME
Trigger: CTCCATGAAGGCTTCACTCCAGACCGTGGACATCCG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACGGATGTCCACGGTCTaGAGTGAAGCCTTCATGGAG +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKRMSTV*SEAFME
Trigger: CTCCATGAAGGCTTCACTCCAGACCGTGGACATCCG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAGGGTCTATACTCTCTTaGAGCTTGAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPGSILS*SLKVFP
Trigger: AGGGAACACCTTCAAGCTCCAAGAGAGTATAGACCC...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGAAGTTGGGGACATaGTCTCCTCACCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKEKLGT*SPHLQG
Trigger: ACCCTGCAGGTGAGGAGACCATGTCCCCAACTTCTC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGAGAAGTTGGGGACATaGTCTCCTCACCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSEKLGT*SPHLQG
Trigger: ACCCTGCAGGTGAGGAGACCATGTCCCCAACTTCTC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTGGAATCAGGAACAATaGCCAAGGTGTTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAWNQEQ*PRCWQG
Trigger: CCCCTGCCAACACCTTGGCCATTGTTCCTGATTCCA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTGGAATCAGGAACAATaGCCAAGGTGTTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWWNQEQ*PRCWQG
Trigger: CCCCTGCCAACACCTTGGCCATTGTTCCTGATTCCA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATACGATGATGGTCTTCTaGAATCAGGAACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHTMMVF*NQEQWP
Trigger: TGGCCATTGTTCCTGATTCCAGAAGACCATCATCGT...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTACTTGAAGGGGCTGTaGAAGGTACTGGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFYLKGL*KVLELK
Trigger: TTTCAACTCCAGTACCTTCCACAGCCCCTTCAAGTA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCATCAATGCTCCGGCTTaGAGGTCTGTCTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSINAPA*RSVCGC
Trigger: GCACCCACAGACAGACCTCCAAGCCGGAGCATTGAT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTATCAATGCTCCGGCTTaGAGGTCTGTCTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSINAPA*RSVCGC
Trigger: GCACCCACAGACAGACCTCCAAGCCGGAGCATTGAT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCTAGAAGAAAGGGTGTaGTGGCTAGGTAGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLEERV*WLGSGY
Trigger: GTAGCCGCTACCTAGCCACCACACCCTTTCTTCTAG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACTATGAGATTTCACAATaGGAGCCTCTTCTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHYEISQ*EPLLEE
Trigger: TTCTTCTAGAAGAGGCTCCCATTGTGAAATCTCATA...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGCTTCTCGCTCTGGATaGCAGCAAGTTAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLASRSG*QQVKSS
Trigger: GGAGGACTTAACTTGCTGCCATCCAGAGCGAGAAGC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGCTTCTCGCTCTGGATaGCAGCAAGTTAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLASRSG*QQVKSS
Trigger: GGAGGACTTAACTTGCTGCCATCCAGAGCGAGAAGC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCCTCACTGTCAGAGCTaGGGTGACTCAGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAPHCQS*GDSVLL
Trigger: AAGCAGAACTGAGTCACCCCAGCTCTGACAGTGAGG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCCTCACTGTCAGAGCTaGGGTGACTCAGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLPHCQS*GDSVLL
Trigger: AAGCAGAACTGAGTCACCCCAGCTCTGACAGTGAGG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTGGCTCTGCGGCCTTTaGCCTCATTCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSWLCGL*PHSPHC
Trigger: ACAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATGGCTCTGCGGCCTTTaGCCTCATTCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPWLCGL*PHSPHC
Trigger: ACAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTGGCTCTGCGGCCTTTaGCCTCATTCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRWLCGL*PHSPHC
Trigger: ACAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTGGCTCTGCGGCCTTTaGCCTCATTCTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSWLCGL*PHSPHC
Trigger: ACAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGGATATTGCAATGGTaGCTCTGCGGCCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLRILQW*LCGLWP
Trigger: AGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCTGCCGAGTAGCTGTTaGCGCGCTCTATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSLPSSC*RALSWE
Trigger: TTCCCAAGATAGAGCGCGCCAACAGCTACTCGGCAG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATGCATATGGCGCACTTaGCTCCTCTGCCGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPCIWRT*LLCRVA
Trigger: AGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTGCATATGGCGCACTTaGCTCCTCTGCCGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRCIWRT*LLCRVA
Trigger: AGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTTGCTTTCAAAGCTTTaGAAAGCCGATGTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSLLSKL*KADVLD
Trigger: GTCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCAA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGACTGATTCTGGGTACTaGCAAAAGCAGTCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLTDSGY*QKQSPE
Trigger: CTCCGGGGACTGCTTTTGCCAGTACCCAGAATCAGT...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377105.5
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGGAAGAAAGGCTGCGTaGCACAGCTTCCGGATGGTC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMGRKAA*HSFRMV
Trigger: GACCATCCGGAAGCTGTGCCACGCAGCCTTTCTTCC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGCAGTTTCAAGGCTTTaGGCCTCTTGGGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLAVSRL*ASWGRR
Trigger: TCTTCGGCCCCAAGAGGCCCAAAGCCTTGAAACTGC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTGCACAGGAAGGAAATaGCTCATGGAAGTTACACAG +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFCTGRK*LMEVTQ
Trigger: CTGTGTAACTTCCATGAGCCATTTCCTTCCTGTGCA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATATGTGGTGGAATCAATaGGCTGAGCATAAGCTGACT +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHMWWNQ*AEHKLT
Trigger: AGTCAGCTTATGCTCAGCCCATTGATTCCACCACAT...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACGATCAGGGATGTGGTaGAATCAATGGGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQRSGMW*NQWAEH
Trigger: ATGCTCAGCCCATTGATTCCACCACATCCCTGATCG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCTCCAGAGGAAGGCATaGGTCCTGATTGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLQRKA*VLIGTD
Trigger: GTCAGTGCCAATCAGGACCCATGCCTTCCTCTGGAG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAATGGGCAAGGGTCTGTTaGTCTGGTGAAAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQWARVC*SGEKAA
Trigger: AGCTGCTTTTTCACCAGACCAACAGACCCTTGCCCA...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATGGTATAAAGGTAATGTaGGCAAGGGTCTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHGIKVM*ARVCWS
Trigger: AGACCAACAGACCCTTGCCCACATTACCTTTATACC...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAAGGAGGAGGCTAAGTTaGTGGGAAGATCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKRRRLS*WEDQAW
Trigger: CCAGGCCTGATCTTCCCACCAACTTAGCCTCCTCCT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAGAAAGTTTTTCCCGTaGTATCTGCCAACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSRKFFP*YLPTSA
Trigger: AGCAGAAGTTGGCAGATACCACGGGAAAAACTTTCT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGGACACTTGCTTTGCATaGAATATCCCAAGAAAACAT +
Preference number: 4 (lower is better)
Translates to: EAPGILRRSSTAASELPLDTCFA*NIPRKH
Trigger: ATGTTTTCTTGGGATATTCCATGCAAAGCAAGTGTC...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR CAA 72 bp GTGTTTTCTGGATCCGGCCCCTCCATGTGTTTGAATTaGCAGCCTCTCAGTCTATGTGCAGATGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: VFSGSGPSMCLN*QPLSLCADGWF
Trigger: AAACCAGCCATCTGCACATAGACTGAGAGGCTGCAAATTCAAACACATGGAGGGGCCGGATCCAGAAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCGGAGATACTGGGGGTaGGGCCAACATGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLRRYWG*GQHAGL
Trigger: TAGGCCAGCATGTTGGCCTCACCCCCAGTATCTCCG...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACGAGACTTAGAGGCATaGTCCTTCAAGGCATCGCCA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKRDLEA*SFKASP
Trigger: TGGCGATGCCTTGAAGGATCATGCCTCTAAGTCTCG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCGTTGTCAGCCAGAATaGAGTGGGAATGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLRCQPE*SGNACC
Trigger: ACAGCATGCATTCCCACTTCATTCTGGCTGACAACG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCAGTCCGCCTTCTTCTaGGTATTTATGCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLQSAFF*VFMPKG
Trigger: GCCTTTGGGCATAAATACTCAGAAGAAGGCGGACTG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCAGTCCGCCTTCTTCTaGGTATTTATGCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWQSAFF*VFMPKG
Trigger: GCCTTTGGGCATAAATACTCAGAAGAAGGCGGACTG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGTCCTGGTGTCCTTCTaGTCCCATCCGAAATACCGT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDVLVSF*SHPKYR
Trigger: ACGGTATTTCGGATGGGATCAGAAGGACACCAGGAC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACTAGTCTGGAGATGGTaGGAAAACGGTGCATGCTTA +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQLVWRW*ENGACL
Trigger: TAAGCATGCACCGTTTTCTCACCATCTCCAGACTAG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCGATGTCAATCAGGCTaGTTCTGTAGTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLRCQSG*FCSLGA
Trigger: TGCCCCCAGACTACAGAATCAGCCTGATTGACATCG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAAAGTCTCTGGAATTGTaGTTCAGCTCCTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPKSLEL*FSSWEM
Trigger: CATTTCCCAGGAGCTGAATCACAATTCCAGAGACTT...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATAATTACCTTGAGGCCTaGGTTCTTGCGCATGCGGAG +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDNYLEA*VLAHAE
Trigger: CTCCGCATGCGCAAGAACTCAGGCCTCAAGGTAATT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCAATTACCTTGAGGCCTaGGTTCTTGCGCATGCGGAG +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSNYLEA*VLAHAE
Trigger: CTCCGCATGCGCAAGAACTCAGGCCTCAAGGTAATT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCTTCCCAGAATTACCTTaGGGCCTGAGTTCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLFPELP*GLSSCA
Trigger: TGCGCAAGAACTCAGGCCTCAAGGTAATTCTGGGAA...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGTCCCAACATTGCTGTaGGCTCCATGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDVPTLL*APCPLP
Trigger: AGGAAGAGGACATGGAGCTCACAGCAATGTTGGGAC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGAACCGGTGCTTGCTCTaGACTTCCTCTTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWNRCLL*TSSSSF
Trigger: GAAGGATGAAGAGGAAGTTCAGAGCAAGCACCGGTT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCTTGGCCAGTTTCCATaGTGGCTCCTCATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERALGQFP*WLLIGK
Trigger: TTTCCCAATGAGGAGCCATCATGGAAACTGGCCAAG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCTTGGCCAGTTTCCATaGTGGCTCCTCATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLLGQFP*WLLIGK
Trigger: TTTCCCAATGAGGAGCCATCATGGAAACTGGCCAAG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGTTCTCCACCCTTTCTaGAGTCACCCGTATCCTCTC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLVLHPF*SHPYPL
Trigger: GAGAGGATACGGGTGACTTCAGAAAGGGTGGAGAAC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGTTCTCCACCCTTTCTaGAGTCACCCGTATCCTCTC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDVLHPF*SHPYPL
Trigger: GAGAGGATACGGGTGACTTCAGAAAGGGTGGAGAAC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGTCCACGGTCTGGAGTaGAGCCTTCATGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAVHGLE*SLHGVL
Trigger: GAGCACTCCATGAAGGCTTCACTCCAGACCGTGGAC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTACTCTCTTGGAGCTTaGAGGTGTTCCCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRYSLGA*RCSLPG
Trigger: GCCAGGAAGGGAACACCTTCAAGCTCCAAGAGAGTA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTACTCTCTTGGAGCTTaGAGGTGTTCCCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSYSLGA*RCSLPG
Trigger: GCCAGGAAGGGAACACCTTCAAGCTCCAAGAGAGTA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATACTCTCTTGGAGCTTaGAGGTGTTCCCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPYSLGA*RCSLPG
Trigger: GCCAGGAAGGGAACACCTTCAAGCTCCAAGAGAGTA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTGCATAGGCACTACTTaGAGGGGCTGTGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDCIGTT*RGCGRY
Trigger: GTACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACTGTCCGCAATTGCTTaGGGGGCATTGACACACCTT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKLSAIA*GALTHL
Trigger: AAGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACTGTCCGCAATTGCTTaGGGGGCATTGACACACCTT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPLSAIA*GALTHL
Trigger: AAGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCTGTCCGCAATTGCTTaGGGGGCATTGACACACCTT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLSAIA*GALTHL
Trigger: AAGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGGACAGGGTTCTCTCTaGGTTATCACCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMGQGSL*VITLLG
Trigger: TCCCAGGAGGGTGATAACTCAGAGAGAACCCTGTCC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGGACAGGGTTCTCTCTaGGTTATCACCCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGGQGSL*VITLLG
Trigger: TCCCAGGAGGGTGATAACTCAGAGAGAACCCTGTCC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTGTCGAGTTTGTCACTaGTGGAGAAGCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLCRVCH*WRSSSW
Trigger: CCAGGAAGAGCTTCTCCATCAGTGACAAACTCGACA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTCTGAGCCTGAGCACTaGTTCTGGGTACTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERASEPEH*FWVLAK
Trigger: TTTTGCCAGTACCCAGAATCAGTGCTCAGGCTCAGA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377105.5
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTAGGGCTGGATTCTTaGGCCTTCTGTGGCGGATAT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLGLDS*AFCGGY
Trigger: ATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCCCAGAAGTCACCTTTaGGTTAACACCTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAPRSHL*VNTSQS
Trigger: GCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCCCAGAAGTCACCTTTaGGTTAACACCTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLPRSHL*VNTSQS
Trigger: GCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCCTGCCCAGCAAGTGTaGACATGCCTTAAATCCCCT +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSPAQQV*TCLKSP
Trigger: AGGGGATTTAAGGCATGTTCACACTTGCTGGGCAGG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAACAGAAGTGTTGGCATaGGAAGGATGTGGGACGTTA +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQTEVLA*EGCGTL
Trigger: TAACGTCCCACATCCTTCTCATGCCAACACTTCTGT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACATACCAAATGTGGCTaGATGGAGGCACACTGCCTG +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKHTKCG*MEAHCL
Trigger: CAGGCAGTGTGCCTCCATTCAGCCACATTTGGTATG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCATACCAAATGTGGCTaGATGGAGGCACACTGCCTG +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLHTKCG*MEAHCL
Trigger: CAGGCAGTGTGCCTCCATTCAGCCACATTTGGTATG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATCGAGGAGCATCAGCCTaGTTCATGACCCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHRGASA*FMTPSK
Trigger: TTTGGAAGGGGTCATGAATCAGGCTGATGCTCCTCG...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTGGTCCAAAGGAACATaGAAAGCATCAAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFWSKGT*KASSRS
Trigger: TGATCTGCTTGATGCTTTTCATGTTCCTTTGGACCA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATGCCCAACTGTTTGAGTaGATTCTTAACTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHAQLFE*ILNWLK
Trigger: CTTAAGCCAGTTAAGAATTCACTCAAACAGTTGGGC...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTTGGTTGACTCCAATCTaGGAGACAGAATATCCAACT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFWLTPI*ETEYPT
Trigger: AGTTGGATATTCTGTCTCTCAGATTGGAGTCAACCA...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGGAAGGCATGGGTCCTaGTTGGCACTGACACTCTTT +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHGRHGS*LALTLF
Trigger: AAAGAGTGTCAGTGCCAATCAGGACCCATGCCTTCC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTGGACGAGGTCAATGTaGACACCAGCCGGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAWTRSM*TPAGVE
Trigger: CTCTACCCCGGCTGGTGTTCACATTGACCTCGTCCA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTATTGCCTTTGGGACTaGATGCTGCTGGCAGACATG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWYCLWD*MLLADM
Trigger: CATGTCTGCCAGCAGCATTCAGTCCCAAAGGCAATA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCTTGGGAAGCTCCAACTaGCATTCCTTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLLGSSN*HSLVIR
Trigger: CCTGATGACCAAGGAATGGCAGTTGGAGCTTCCCAA...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTGGGAAGCTCCAACTaGCATTCCTTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLGSSN*HSLVIR
Trigger: CCTGATGACCAAGGAATGGCAGTTGGAGCTTCCCAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTTCCAGTTGTCATTGCTaGTTTGATGAGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESSSCHC*FDEPFP
Trigger: GGGAAAGGGCTCATCAAAGCAGCAATGACAACTGGA...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR GCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTCCTTCCACTATGAGTaGCACCACAGGAACACCTTG +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLSFHYE*HHRNTL
Trigger: CAAGGTGTTCCTGTGGTGGCACTCATAGTGGAAGGA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AAAGCACCTCAGTGGTTCATGACTTCCAAGCAAAATGAAATCCGAAACCTAAGAGGCCAGGATGTCCGATaGCCGTCCACTCCCATCACA +
Preference number: 4 (lower is better)
Translates to: KAPQWFMTSKQNEIRNLRGQDVR*PSTPIT
Trigger: TGTGATGGGAGTGGACGGGCATCGGACATCCTGGCC...TCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATATGGTGAGAAAACGGTaGATGCTTACTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHMVRKR*MLTPFS
Trigger: AGAGAATGGAGTAAGCATGCACCGTTTTCTCACCAT...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGGGTCCGGAAGCGCTTaGGCGTGTAGTTGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIGSGSA*ACSCSD
Trigger: ATCGCTGCAACTACACGCGCAAGCGCTTCCGGACCC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTAACAGGGCCATCTTCTaGCGCTTCATGAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLNRAIF*RFMRTA
Trigger: GGCTGTTCTCATGAAGCGGCAGAAGATGGCCCTGTT...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAAACAGGGCCATCTTCTaGCGCTTCATGAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPNRAIF*RFMRTA
Trigger: GGCTGTTCTCATGAAGCGGCAGAAGATGGCCCTGTT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTAACAGGGCCATCTTCTaGCGCTTCATGAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSNRAIF*RFMRTA
Trigger: GGCTGTTCTCATGAAGCGGCAGAAGATGGCCCTGTT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGTTTCGTCCCAACATTaGTGTGAGCTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLVSSQH*CELHVL
Trigger: GAGGACATGGAGCTCACAGCAATGTTGGGACGAAAC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTATTCATAGATTTTTCTaGCGAGGGGGATTAACCGGT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFIHRFF*RGGLTG
Trigger: ACCGGTTAATCCCCCTCGGCAGAAAAATCTATGAAT...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTTGTAGGCGGCGTCCGTaGAGTCTGACGAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVCRRRP*SLTRSS
Trigger: CGAGGACCTCGTCAGACTGCACGGACGCCGCCTACA...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATTGCAATGGTGGCTCTaGGGCCTTTGGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPLQWWL*GLWPHS
Trigger: AGAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACTTGCTGTGTTCCGCTaGCTGTCGAGTTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPLAVFR*LSSLSL
Trigger: CAGTGACAAACTCGACAGGCAGCGGAACACAGCAAG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCTTGCTGTGTTCCGCTaGCTGTCGAGTTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLAVFR*LSSLSL
Trigger: CAGTGACAAACTCGACAGGCAGCGGAACACAGCAAG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACCGGCTTGGAGGACTTaGTTCTCTGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPPAWRT*FSGRDF
Trigger: GAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCCGGCTTGGAGGACTTaGTTCTCTGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDPAWRT*FSGRDF
Trigger: GAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGCTCTCATGGCTTTCTaGTGTGACTGCGGATACACA +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWALMAF*CDCGYT
Trigger: TGTGTATCCGCAGTCACAGCAGAAAGCCATGAGAGC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTCAGAAATCAACAGATaGCTCCTGGCATGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWSEINR*LLAWSV
Trigger: CACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATTTAGGTAGAACTGCTTaGTGCCGGCTTATACTGAAT +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHLGRTA*CRLILN
Trigger: ATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAA...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCTCTCTCTGCAGCCGTaGTCATGCATACCAAATGTG +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLLSLQP*SCIPNV
Trigger: CACATTTGGTATGCATGAGCACGGCTGCAGAGAGAG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATAGATGGAAGAAAGGCTaGGTGGCACAGCTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHRWKKG*VAQLPD
Trigger: ATCCGGAAGCTGTGCCACGCAGCCTTTCTTCCATCT...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATTGCATATATCACAGATaGACAACACCTAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHCIYHR*TTPRPW
Trigger: CCAAGGTCTAGGTGTTGTGCATCTGTGATATATGCA...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGAAATGGGTAAAGAAATaGATTTGTGCATCTCATGGT +
Preference number: 4 (lower is better)
Translates to: EAPGILRRSSTAASELPLKWVKK*ICASHG
Trigger: ACCATGAGATGCACAAATGCATTTCTTTACCCATTT...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCCACAGCAACACCTATaGGGGTCTTTGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMPQQHL*GSLVLG
Trigger: ACCCAGCACCAAAGACCCCCATAGGTGTTGCTGTGG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTGTGAGGCCAACATGCTaGCCTATCAGACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSVRPTC*PIRRPQ
Trigger: CTGTGGGCGTCTGATAGGCCAGCATGTTGGCCTCAC...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATTCTGCAGGCCCCCATaGACAGAGATGAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPFCRPP*TEMRSL
Trigger: CAAGCTTCTCATCTCTGTCCATGGGGGCCTGCAGAA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGGACATGGTCTGGTATaGCCGGACAACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRGHGLV*PDNISS
Trigger: GGAAGAGATGTTGTCCGGCCATACCAGACCATGTCC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGGACATGGTCTGGTATaGCCGGACAACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHGHGLV*PDNISS
Trigger: GGAAGAGATGTTGTCCGGCCATACCAGACCATGTCC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGGATTGGACATGGTCTaGTATGGCCGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWGLDMV*YGRTTS
Trigger: AGATGTTGTCCGGCCATACCAGACCATGTCCAATCC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTCATGGGATTGGACATaGTCTGGTATGGCCGGACAA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERASWDWT*SGMAGQ
Trigger: TTGTCCGGCCATACCAGACCATGTCCAATCCCATGA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGCTTGCTCATGGGATTaGACATGGTCTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSACSWD*TWSGMA
Trigger: GGCCATACCAGACCATGTCCAATCCCATGAGCAAGC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGCTTGCTCATGGGATTaGACATGGTCTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRACSWD*TWSGMA
Trigger: GGCCATACCAGACCATGTCCAATCCCATGAGCAAGC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACTCCATATTTTCCAGTaGTCCCGTTGTCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQLHIFQ*SRCQPE
Trigger: TTCTGGCTGACAACGGGACCACTGGAAAATATGGAG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTATCACAGACAACCACTaGCACGGGAGGGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSITDNH*HGRGVS
Trigger: CGAGACACCCCTCCCGTGCCAGTGGTTGTCTGTGAT...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCTAAGGCATCCAACATaGCTTGCTCCAGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERALRHPT*LAPEIP
Trigger: TGGGATCTCTGGAGCAAGCCATGTTGGATGCCTTAG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGCTGATTCTGTAGTCTaGGGGCAGGTTCCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLADSVV*GQVPLK
Trigger: TTTAAGGGGAACCTGCCCCCAGACTACAGAATCAGC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377105.5
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCACACCATGAGCTCATaGAAAGGGAAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRHTMSS*KGKGKW
Trigger: CCACTTCCCCTTCCCTTTCCATGAGCTCATGGTGTG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATAGCTCCACAGCCAGCTaGCCAAAGTCTCTGGAATTG +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHSSTAS*PKSLEL
Trigger: CAATTCCAGAGACTTTGGCCAGCTGGCTGTGGAGCT...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCACCAGAACTTCACGATaGGTGCATTGTAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSTRTSR*VHCRIH
Trigger: ATGAATTCTACAATGCACCCATCGTGAAGTTCTGGT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCTGAAGGGCTGGTCTTaGAGACGAAGGATCATTCCG +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLKGWS*RRRIIP
Trigger: CGGAATGATCCTTCGTCTCCAAGACCAGCCCTTCAG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCTGAAGGGCTGGTCTTaGAGACGAAGGATCATTCCG +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLKGWS*RRRIIP
Trigger: CGGAATGATCCTTCGTCTCCAAGACCAGCCCTTCAG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATCACTCCTGAAGGGCTaGTCTTGGAGACGAAGGATC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKSLLKG*SWRRRI
Trigger: GATCCTTCGTCTCCAAGACCAGCCCTTCAGGAGTGA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCACTCCTGAAGGGCTaGTCTTGGAGACGAAGGATC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSLLKG*SWRRRI
Trigger: GATCCTTCGTCTCCAAGACCAGCCCTTCAGGAGTGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAAAAGGATGGCTTGCCTaGCGACCCCAAAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPKGWLA*RPQSSS
Trigger: TGATGAGCTTTGGGGTCGCCAGGCAAGCCATCCTTT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGAAAGGATGGCTTGCCTaGCGACCCCAAAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRKGWLA*RPQSSS
Trigger: TGATGAGCTTTGGGGTCGCCAGGCAAGCCATCCTTT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTAAAGGATGGCTTGCCTaGCGACCCCAAAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSKGWLA*RPQSSS
Trigger: TGATGAGCTTTGGGGTCGCCAGGCAAGCCATCCTTT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTAAAGGATGGCTTGCCTaGCGACCCCAAAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLKGWLA*RPQSSS
Trigger: TGATGAGCTTTGGGGTCGCCAGGCAAGCCATCCTTT...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCATTGGGAAAAAGGATaGCTTGCCTGGCGACCCCAA +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDHWEKG*LAWRPQ
Trigger: TTGGGGTCGCCAGGCAAGCCATCCTTTTTCCCAATG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCATTGGGAAAAAGGATaGCTTGCCTGGCGACCCCAA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRHWEKG*LAWRPQ
Trigger: TTGGGGTCGCCAGGCAAGCCATCCTTTTTCCCAATG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACATTGGGAAAAAGGATaGCTTGCCTGGCGACCCCAA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPHWEKG*LAWRPQ
Trigger: TTGGGGTCGCCAGGCAAGCCATCCTTTTTCCCAATG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGAAGATGATCAGTGGTaGGGGCAGAACTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPEDDQW*GQNWPF
Trigger: GAAAGGCCAGTTCTGCCCCCACCACTGATCATCTTC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGAAGATGATCAGTGGTaGGGGCAGAACTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDEDDQW*GQNWPF
Trigger: GAAAGGCCAGTTCTGCCCCCACCACTGATCATCTTC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGAAGATGATCAGTGGTaGGGGCAGAACTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSEDDQW*GQNWPF
Trigger: GAAAGGCCAGTTCTGCCCCCACCACTGATCATCTTC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCGGCAGCACAGGTGCTaGAATATCATGGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSRQHRC*NIMVMW
Trigger: CCACATGACCATGATATTCCAGCACCTGTGCTGCCG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTGGAATCAGGAACAATaGCCAAGGTGTTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDWNQEQ*PRCWQG
Trigger: CCCCTGCCAACACCTTGGCCATTGTTCCTGATTCCA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGATCAATGCTCCGGCTTaGAGGTCTGTCTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMINAPA*RSVCGC
Trigger: GCACCCACAGACAGACCTCCAAGCCGGAGCATTGAT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGAACGCTCAATGGTGTaGTACATCGGAGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSERSMV*YIGGSE
Trigger: CTCAGAGCCTCCGATGTACCACACCATTGAGCGTTC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGAACGCTCAATGGTGTaGTACATCGGAGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPERSMV*YIGGSE
Trigger: CTCAGAGCCTCCGATGTACCACACCATTGAGCGTTC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCTAGAAGAAAGGGTGTaGTGGCTAGGTAGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSLEERV*WLGSGY
Trigger: GTAGCCGCTACCTAGCCACCACACCCTTTCTTCTAG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATCTAGAAGAAAGGGTGTaGTGGCTAGGTAGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHLEERV*WLGSGY
Trigger: GTAGCCGCTACCTAGCCACCACACCCTTTCTTCTAG...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCAGGCACCCCAAAGTTaGCATAATAGCTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAQAPQS*HNSSLR
Trigger: CCTCAAGGAGCTATTATGCCAACTTTGGGGTGCCTG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCAGGCACCCCAAAGTTaGCATAATAGCTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWQAPQS*HNSSLR
Trigger: CCTCAAGGAGCTATTATGCCAACTTTGGGGTGCCTG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGCTTCTCGCTCTGGATaGCAGCAAGTTAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLASRSG*QQVKSS
Trigger: GGAGGACTTAACTTGCTGCCATCCAGAGCGAGAAGC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGCTTCTCGCTCTGGATaGCAGCAAGTTAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKASRSG*QQVKSS
Trigger: GGAGGACTTAACTTGCTGCCATCCAGAGCGAGAAGC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACCTCACTGTCAGAGCTaGGGTGACTCAGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPPHCQS*GDSVLL
Trigger: AAGCAGAACTGAGTCACCCCAGCTCTGACAGTGAGG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTAGGATATTGCAATGGTaGCTCTGCGGCCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSRILQW*LCGLWP
Trigger: AGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATGGAGAAGCTCTTCCTaGTGTGTGCATATGGCGCAC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKWRSSS*CVHMAH
Trigger: GTGCGCCATATGCACACACCAGGAAGAGCTTCTCCA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATTTGCTTTCAAAGCTTTaGAAAGCCGATGTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHLLSKL*KADVLD
Trigger: GTCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCAA...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTACTGATTCTGGGTACTaGCAAAAGCAGTCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSTDSGY*QKQSPE
Trigger: CTCCGGGGACTGCTTTTGCCAGTACCCAGAATCAGT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377105.5
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGCTGATTCTGTAGTCTaGGGGCAGGTTCCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLADSVV*GQVPLF
Trigger: AAAAAGGGGAACCTGCCCCCAGACTACAGAATCAGC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377110.9
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCCCTGTGTCTGGCACTaGGTCAGATCAAATGCTTTC +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAPCVWH*VRSNAF
Trigger: GAAAGCATTTGATCTGACCCAGTGCCAGACACAGGG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATTTCCCCTGCTCTCATaGCTTTCTGCTGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPFPLLS*LSAVTA
Trigger: CGCAGTCACAGCAGAAAGCCATGAGAGCAGGGGAAA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCAACAGATGCCTCCTaGCATGGAGCGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSTDAS*HGACSK
Trigger: CTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCCAAATGTGGCTGAATaGAGGCACACTGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMPNVAE*RHTACC
Trigger: GCAGCAGGCAGTGTGCCTCCATTCAGCCACATTTGG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACATGCATACCAAATGTaGCTGAATGGAGGCACACTG +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQHAYQM*LNGGTL
Trigger: CAGTGTGCCTCCATTCAGCCACATTTGGTATGCATG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTGGTCCCCCACGGCTCTaGCATCCCATGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVGPPRL*HPMVIS
Trigger: GGAGATGACCATGGGATGCCAGAGCCGTGGGGGACC...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCAGGCTTTGGGCCTCTTaGGGCCGAAGAGGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIARLWAS*GRRGCG
Trigger: ACCACAACCTCTTCGGCCCCAAGAGGCCCAAAGCCT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTACAGAACATCCCACATaGCAATTTCAGGCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFTEHPT*QFQASS
Trigger: AGAACTAGCCTGAAATTGCCATGTGGGATGTTCTGT...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCTTGGCAGTTACGTCTTaGAGGTGTTCAGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLLAVTS*RCSGGR
Trigger: ACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAA...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGAAGGAAATGGCTCATaGAAGTTACACAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSEGNGS*KLHSLC
Trigger: ACACAAACTGTGTAACTTCCATGAGCCATTTCCTTC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCATGCTACAACTACGCTaGGTTAAACATGGGTTACAT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSMLQLR*VKHGLH
Trigger: ATGTAACCCATGTTTAACCCAGCGTAGTTGTAGCAT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTTGGCTTGCCACCTCTaGGTCCCATGGCTATACAAC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLACHL*VPWLYN
Trigger: GTTGTATAGCCATGGGACCCAGAGGTGGCAAGCCAA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCAGACCCAAGAGGTGTTaGCTTGCCACCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIARPKRC*LATSGS
Trigger: GGACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAGGTTTTAATGATGTGTaGGAAGCTGCGGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPGFNDV*EAAVKM
Trigger: CATCTTCACCGCAGCTTCCCACACATCATTAAAACC...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCAGTCTATGTGCAGATaGCTGGTTTTAATGATGTGT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSQSMCR*LVLMMC
Trigger: ACACATCATTAAAACCAGCCATCTGCACATAGACTG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 72 bp CCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTaGATCTGTGGCCCAGAAGTCACCTTTGAGTTAACA +
Preference number: 4 (lower is better)
Translates to: PCVWHWVRSNAF*ICGPEVTFELT
Trigger: TGTTAACTCAAAGGTGACTTCTGGGCCACAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTCTTTGGTGCTGGGTATaGTGTGGACACATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESLWCWV*CGHILF
Trigger: AAAGAGAATGTGTCCACATCATACCCAGCACCAAAG...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTTCCCAAAGACTTGCTTaGGTTTTGGCTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESSQRLA*VLAGVQ
Trigger: TTGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGA...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTAAGGCATCGCCAACATaGCGAATAACACCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESKASPT*RITPVL
Trigger: TAACACAGGTGTTATTCGTCATGTTGGCGATGCCTT...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAAGGCATCGCCAACATaGCGAATAACACCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQKASPT*RITPVL
Trigger: TAACACAGGTGTTATTCGTCATGTTGGCGATGCCTT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACGAGACTTAGAGGCATaGTCCTTCAAGGCATCGCCA +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGRDLEA*SFKASP
Trigger: TGGCGATGCCTTGAAGGATCATGCCTCTAAGTCTCG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCAACATCTCTTCCAATaGGGTCCTCCTGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLQHLFQ*GPPGFP
Trigger: TGGAAAACCAGGAGGACCTCATTGGAAGAGATGTTG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCAACATCTCTTCCAATaGGGTCCTCCTGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWQHLFQ*GPPGFP
Trigger: TGGAAAACCAGGAGGACCTCATTGGAAGAGATGTTG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCGTTGTCAGCCAGAATaGAGTGGGAATGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDRCQPE*SGNACC
Trigger: ACAGCATGCATTCCCACTTCATTCTGGCTGACAACG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACGTTGTCAGCCAGAATaGAGTGGGAATGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPRCQPE*SGNACC
Trigger: ACAGCATGCATTCCCACTTCATTCTGGCTGACAACG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCAGTCCGCCTTCTTCTaGGTATTTATGCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSQSAFF*VFMPKG
Trigger: GCCTTTGGGCATAAATACTCAGAAGAAGGCGGACTG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGTCCTGGTGTCCTTCTaGTCCCATCCGAAATACCGT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGVLVSF*SHPKYR
Trigger: ACGGTATTTCGGATGGGATCAGAAGGACACCAGGAC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGTCCTGGTGTCCTTCTaGTCCCATCCGAAATACCGT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMVLVSF*SHPKYR
Trigger: ACGGTATTTCGGATGGGATCAGAAGGACACCAGGAC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCTAGTCTGGAGATGGTaGGAAAACGGTGCATGCTTA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLLVWRW*ENGACL
Trigger: TAAGCATGCACCGTTTTCTCACCATCTCCAGACTAG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACGATGTCAATCAGGCTaGTTCTGTAGTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGRCQSG*FCSLGA
Trigger: TGCCCCCAGACTACAGAATCAGCCTGATTGACATCG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATTCCCAGAATTACCTTaGGGCCTGAGTTCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPFPELP*GLSSCA
Trigger: TGCGCAAGAACTCAGGCCTCAAGGTAATTCTGGGAA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGTCCCAACATTGCTGTaGGCTCCATGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMVPTLL*APCPLP
Trigger: AGGAAGAGGACATGGAGCTCACAGCAATGTTGGGAC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTAACCGGTGCTTGCTCTaGACTTCCTCTTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSNRCLL*TSSSSF
Trigger: GAAGGATGAAGAGGAAGTTCAGAGCAAGCACCGGTT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCTTGGCCAGTTTCCATaGTGGCTCCTCATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLGQFP*WLLIGK
Trigger: TTTCCCAATGAGGAGCCATCATGGAAACTGGCCAAG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTAGAGGTAGCAGGCCATaGTGGCCGGCACGATCCAAG +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVRGSRP*WPARSK
Trigger: CTTGGATCGTGCCGGCCATCATGGCCTGCTACCTCT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGCTCATCATCGGTTATaGAGAGTTTCAGGCCGTAGT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWAHHRL*RVSGRS
Trigger: ACTACGGCCTGAAACTCTTCATAACCGATGATGAGC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTGCATAGGCACTACTTaGAGGGGCTGTGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMCIGTT*RGCGRY
Trigger: GTACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTGTCGAGTTTGTCACTaGTGGAGAAGCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRCRVCH*WRSSSW
Trigger: CCAGGAAGAGCTTCTCCATCAGTGACAAACTCGACA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTTAGGGCTGGATTCTTaGGCCTTCTGTGGCGGATAT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLGLDS*AFCGGY
Trigger: ATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTAGGGCTGGATTCTTaGGCCTTCTGTGGCGGATAT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLGLDS*AFCGGY
Trigger: ATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCCCAGAAGTCACCTTTaGGTTAACACCTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSPRSHL*VNTSQS
Trigger: GCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCCCAGAAGTCACCTTTaGGTTAACACCTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSPRSHL*VNTSQS
Trigger: GCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCATGGCTTTCTGCTGTaGCTGCGGATACACATTCAT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLHGFLL*LRIHIH
Trigger: ATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGCTTTCTGCTGTaGCTGCGGATACACATTCAT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWHGFLL*LRIHIH
Trigger: ATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGCTGCCGGCTTATACTaGATAAAGAGGATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLAAGLY*IKRMLF
Trigger: GAAGAGCATCCTCTTTATTCAGTATAAGCCGGCAGC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGCTGCCGGCTTATACTaGATAAAGAGGATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWAAGLY*IKRMLF
Trigger: GAAGAGCATCCTCTTTATTCAGTATAAGCCGGCAGC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCACAGAAGTGTTGGCATaGGAAGGATGTGGGACGTTA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLTEVLA*EGCGTL
Trigger: TAACGTCCCACATCCTTCTCATGCCAACACTTCTGT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGGGGATGCACGATTTTaGAGAAGAGGGACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAGDARF*RRGTAC
Trigger: GCAGGCTGTCCCTCTTCTTCAAAATCGTGCATCCCC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATCATCAGCCTGATTCATaGCCCCTTCCAAATTCCACC +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHHQPDS*PLPNST
Trigger: GGTGGAATTTGGAAGGGGTCATGAATCAGGCTGATG...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAACCCTGCCTCTCAGCTaGGAGGACCGTCATTCGCCA +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQTLPLS*EDRHSP
Trigger: TGGCGAATGACGGTCCTCTCAGCTGAGAGGCAGGGT...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGGACACTGCAGATGCTaGGCTTCCAATGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQGHCRC*ASNAGP
Trigger: GGGGCCAGCATTGGAAGCTCAGCATCTGCAGTGTCC...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCTCCAGTTGTCATTGCTaGTTTGATGAGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLSSCHC*FDEPFP
Trigger: GGGAAAGGGCTCATCAAAGCAGCAATGACAACTGGA...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCGCTCCAGTTGTCATTaGTGCTTTGATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWRSSCH*CFDEPF
Trigger: AAAGGGCTCATCAAAGCAGCAATGACAACTGGAGCG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTGGGCAATACCTATGGTaGATATCTTTCCTCGAGACT +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESGQYLW*ISFLET
Trigger: AGTCTCGAGGAAAGATATGCACCATAGGTATTGCCC...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR GCA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTTTCTGGAGTGAAATATaGTTTTCCAGTTGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: SSSATPEIARPTPPLLPPFWSEI*FSSCLR
Trigger: TCGAAGACAACTGGAAAAGCATATTTCACTCCAGAA...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTCCTTCCACTATGAGTaGCACCACAGGAACACCTTG +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSFHYE*HHRNTL
Trigger: CAAGGTGTTCCTGTGGTGGCACTCATAGTGGAAGGA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATCCTTCCACTATGAGTaGCACCACAGGAACACCTTG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPSFHYE*HHRNTL
Trigger: CAAGGTGTTCCTGTGGTGGCACTCATAGTGGAAGGA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTTCTTCTGAGTATTTATaGCCAAAGGCCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESSSEYL*PKARMS
Trigger: GGACATCCTGGCCTTTGGGCATAAATACTCAGAAGA...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR GCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTGCCTCCTCACCGTGCTaGCAGAAGAACAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVASSPC*QKNRAI
Trigger: GATGGCCCTGTTCTTCTGGCAGCACGGTGAGGAGGC...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCATCGGCAGCACAGGTaGTGGAATATCATGGTCATG +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSHRQHR*WNIMVM
Trigger: CATGACCATGATATTCCAGCACCTGTGCTGCCGATG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACATCGGCAGCACAGGTaGTGGAATATCATGGTCATG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPHRQHR*WNIMVM
Trigger: CATGACCATGATATTCCAGCACCTGTGCTGCCGATG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATCATCGGCAGCACAGGTaGTGGAATATCATGGTCATG +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHHRQHR*WNIMVM
Trigger: CATGACCATGATATTCCAGCACCTGTGCTGCCGATG...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGAAGCCTTCATGGAGTaGTCTCTCTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSEAFME*SLSLTS
Trigger: GGAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCATGGTCTCCTCACCTaGAGGGTCTATACTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSHGLLT*RVYTLL
Trigger: CAAGAGAGTATAGACCCTGCAGGTGAGGAGACCATG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCAGGTCTGTCTGTGGGTaGAAGTGTTGCATAGGCACT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSRSVCG*KCCIGT
Trigger: AGTGCCTATGCAACACTTGCACCCACAGACAGACCT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAAGGTCTGTCTGTGGGTaGAAGTGTTGCATAGGCACT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKRSVCG*KCCIGT
Trigger: AGTGCCTATGCAACACTTGCACCCACAGACAGACCT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTAGGTCTGTCTGTGGGTaGAAGTGTTGCATAGGCACT +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLRSVCG*KCCIGT
Trigger: AGTGCCTATGCAACACTTGCACCCACAGACAGACCT...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTAATACTTGTGTATTCTaGTGTTTTTACAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFNTCVF*CFYRHP
Trigger: GGGGTGCCTGTAAAAACAGCAGAATACACAAGTATT...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCAGCTCTGTCCGCAATTaGTTGAGGGGCATTGACACA +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSSVRN*LRGIDT
Trigger: TGTGTCAATGCCCCTCAAGCAATTGCGGACAGAGCT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATAGCTCTGTCCGCAATTaGTTGAGGGGCATTGACACA +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHSSVRN*LRGIDT
Trigger: TGTGTCAATGCCCCTCAAGCAATTGCGGACAGAGCT...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCGGAGCAGCTCCTGTTaGTTTCATTTTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSRSSSC*FHFAAA
Trigger: AGCTGCAGCAAAATGAAAGCAACAGGAGCTGCTCCG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377105.5
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGCTCTCATGGCTTTCTaGTGTGACTGCGGATACACA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPALMAF*CDCGYT
Trigger: TGTGTATCCGCAGTCACAGCAGAAAGCCATGAGAGC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCAGAAATCAACAGATaGCTCCTGGCATGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSEINR*LLAWSV
Trigger: CACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGAGAAGAGGGACAGCCTaGACAAAACAGCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMRRGTA*TKQPVV
Trigger: GACCACAGGCTGTTTTGTGCAGGCTGTCCCTCTTCT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCTGGAGGCACACTGCCTaGTGCTTCGGGGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFWRHTA*CFGEGM
Trigger: CATCCCCTCCCCGAAGCAGCAGGCAGTGTGCCTCCA...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTCACCTCCCCTCTCTCTaGAGCCGTGCTCATGCATAC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIHLPSL*SRAHAY
Trigger: GTATGCATGAGCACGGCTGCAGAGAGAGGGGAGGTG...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGAGATGGAAGAAAGGCTaGGTGGCACAGCTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMRWKKG*VAQLPD
Trigger: ATCCGGAAGCTGTGCCACGCAGCCTTTCTTCCATCT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGGCCACAGAATCAATaGCACATTGCTGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLRPQNQ*HIAAQR
Trigger: TCTCTGTGCAGCAATGTGGCATTGATTCTGTGGCCT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAGAAAGCTTAGGTCAATaGAGGCTGAGAGGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPESLGQ*RLRGKF
Trigger: AAACTTTCCTCTCAGCCTGCATTGACCTAAGCTTTC...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAAGCACACAAACATTGTaGAAACGCACAAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPSTQTL*KRTRAC
Trigger: GCAGGCCCTTGTGCGTTTGCACAATGTTTGTGTGCT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCATTTGGGACTGAATGCTaGTGGCAGACATGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPFGTEC*WQTCLF
Trigger: AAACAAACATGTCTGCCAGCAGCATTCAGTCCCAAA...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGCCTTTGGGACTGAATaGTGCTGGCAGACATGTTTG +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKAFGTE*CWQTCL
Trigger: CAAACATGTCTGCCAGCAGCATTCAGTCCCAAAGGC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGCCTTTGGGACTGAATaGTGCTGGCAGACATGTTTG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPAFGTE*CWQTCL
Trigger: CAAACATGTCTGCCAGCAGCATTCAGTCCCAAAGGC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTGAGGAGCTCCACAGCTaGCTCAGAGCTGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSEELHS*LRAAFV
Trigger: TACAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTC...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTGTGAGGCCAACATGCTaGCCTATCAGACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSVRPTC*PIRRPQ
Trigger: CTGTGGGCGTCTGATAGGCCAGCATGTTGGCCTCAC...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGACCACTTTTCAGACTaGATGTCATTTCGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWDHFSD*MSFRER
Trigger: CCTCTCCCGAAATGACATCCAGTCTGAAAAGTGGTC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTATGGCTTTGTTGGAATaGCCACCTCCTTGGAACTCA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAMALLE*PPPWNS
Trigger: TGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCAT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCATGGCTTTGTTGGAATaGCCACCTCCTTGGAACTCA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLMALLE*PPPWNS
Trigger: TGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCAT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCCAACTGCCATTCCTTaGTCATCAGGTGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAPTAIP*SSGVRG
Trigger: TCCTCTTACACCTGATGACCAAGGAATGGCAGTTGG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCCAACTGCCATTCCTTaGTCATCAGGTGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWPTAIP*SSGVRG
Trigger: TCCTCTTACACCTGATGACCAAGGAATGGCAGTTGG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCCAATGAGGTCCTCCTaGTTTTCCACAATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDPMRSS*FSTIPQ
Trigger: CTGGGGAATTGTGGAAAACCAGGAGGACCTCATTGG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCCAATGAGGTCCTCCTaGTTTTCCACAATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSPMRSS*FSTIPQ
Trigger: CTGGGGAATTGTGGAAAACCAGGAGGACCTCATTGG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGGATTGGACATGGTCTaGTATGGCCGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRGLDMV*YGRTTS
Trigger: AGATGTTGTCCGGCCATACCAGACCATGTCCAATCC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGGATTGGACATGGTCTaGTATGGCCGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPGLDMV*YGRTTS
Trigger: AGATGTTGTCCGGCCATACCAGACCATGTCCAATCC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCATGGGATTGGACATaGTCTGGTATGGCCGGACAA +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSWDWT*SGMAGQ
Trigger: TTGTCCGGCCATACCAGACCATGTCCAATCCCATGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATCATGGGATTGGACATaGTCTGGTATGGCCGGACAA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKSWDWT*SGMAGQ
Trigger: TTGTCCGGCCATACCAGACCATGTCCAATCCCATGA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTATCACAGACAACCACTaGCACGGGAGGGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIITDNH*HGRGVS
Trigger: CGAGACACCCCTCCCGTGCCAGTGGTTGTCTGTGAT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCTAAGGCATCCAACATaGCTTGCTCCAGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLRHPT*LAPEIP
Trigger: TGGGATCTCTGGAGCAAGCCATGTTGGATGCCTTAG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGCTGATTCTGTAGTCTaGGGGCAGGTTCCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSADSVV*GQVPLK
Trigger: TTTAAGGGGAACCTGCCCCCAGACTACAGAATCAGC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377105.5
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGAAAGGGAAGGGGAAGTaGTTGATCTCAGGATCATCC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWKGKGK*LISGSS
Trigger: GGATGATCCTGAGATCAACCACTTCCCCTTCCCTTT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGCTGGCCAAAGTCTCTaGAATTGTGATTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLAGQSL*NCDSAP
Trigger: AGGAGCTGAATCACAATTCCAGAGACTTTGGCCAGC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCACTCCTGAAGGGCTaGTCTTGGAGACGAAGGATC +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSLLKG*SWRRRI
Trigger: GATCCTTCGTCTCCAAGACCAGCCCTTCAGGAGTGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACGGCAGCACAGGTGCTaGAATATCATGGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGRQHRC*NIMVMW
Trigger: CCACATGACCATGATATTCCAGCACCTGTGCTGCCG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTCGAGCGGATTTTGTTaGACTCGGCCCGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMISSGFC*TRPAPD
Trigger: GTCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGGGTCTATACTCTCTTaGAGCTTGAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLGSILS*SLKVFP
Trigger: AGGGAACACCTTCAAGCTCCAAGAGAGTATAGACCC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTTGGAGGTCTGTCTGTaGGTGCAAGTGTTGCATAGG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSLEVCL*VQVLHR
Trigger: CCTATGCAACACTTGCACCCACAGACAGACCTCCAA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATTGGAGGTCTGTCTGTaGGTGCAAGTGTTGCATAGG +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKLEVCL*VQVLHR
Trigger: CCTATGCAACACTTGCACCCACAGACAGACCTCCAA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTGGAGGTCTGTCTGTaGGTGCAAGTGTTGCATAGG +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLEVCL*VQVLHR
Trigger: CCTATGCAACACTTGCACCCACAGACAGACCTCCAA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTTTTGGAACGCTCAATaGTGTGGTACATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAFWNAQ*CGTSEA
Trigger: AGCCTCCGATGTACCACACCATTGAGCGTTCCAAAA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGGTAGCGGCTACTTTTaGAACGCTCAATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKGSGYF*NAQWCG
Trigger: ACCACACCATTGAGCGTTCCAAAAGTAGCCGCTACC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGAAGAAAGGGTGTGGTaGCTAGGTAGCGGCTACTTT +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSEERVW*LGSGYF
Trigger: AAAGTAGCCGCTACCTAGCCACCACACCCTTTCTTC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGAAGAAAGGGTGTGGTaGCTAGGTAGCGGCTACTTT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSEERVW*LGSGYF
Trigger: AAAGTAGCCGCTACCTAGCCACCACACCCTTTCTTC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGAGGATATTGCAATGGTaGCTCTGCGGCCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMRILQW*LCGLWP
Trigger: AGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGAGTTATCACCCTCCTaGGAGGATATTGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWELSPS*EDIAMV
Trigger: CACCATTGCAATATCCTCCCAGGAGGGTGATAACTC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGAGTTATCACCCTCCTaGGAGGATATTGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAELSPS*EDIAMV
Trigger: CACCATTGCAATATCCTCCCAGGAGGGTGATAACTC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGGAAAGCCGATGTTCTaGACAGTCTCCTCATGGACA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLGKPMF*TVSSWT
Trigger: TGTCCATGAGGAGACTGTCCAGAACATCGGCTTTCC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGGAAAGCCGATGTTCTaGACAGTCTCCTCATGGACA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKGKPMF*TVSSWT
Trigger: TGTCCATGAGGAGACTGTCCAGAACATCGGCTTTCC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCCCTGTGTCTGGCACTaGGTCAGATCAAATGCTTTC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSPCVWH*VRSNAF
Trigger: GAAAGCATTTGATCTGACCCAGTGCCAGACACAGGG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATTTCCCCTGCTCTCATaGCTTTCTGCTGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGFPLLS*LSAVTA
Trigger: CGCAGTCACAGCAGAAAGCCATGAGAGCAGGGGAAA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGGCTCTGGCATCCCATaGTCATCTCCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAGSGIP*SSPHLQ
Trigger: TTGCAGGTGTGGAGATGACCATGGGATGCCAGAGCC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACGGAAGAAAGGCTGCGTaGCACAGCTTCCGGATGGTC +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYGRKAA*HSFRMV
Trigger: GACCATCCGGAAGCTGTGCCACGCAGCCTTTCTTCC...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGTGTTCAGGAGGACGTaGTGGAGCCATGCAAATGAT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDVFRRT*WSHAND
Trigger: ATCATTTGCATGGCTCCACCACGTCCTCCTGAACAC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTTGGCAGTTACGTCTTaGAGGTGTTCAGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLAVTS*RCSGGR
Trigger: ACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACACCTCTGGGTCCCATaGCTATACAACCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKHLWVP*LYNLQL
Trigger: TAACTGCAGGTTGTATAGCCATGGGACCCAGAGGTG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCACCTCTGGGTCCCATaGCTATACAACCTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSHLWVP*LYNLQL
Trigger: TAACTGCAGGTTGTATAGCCATGGGACCCAGAGGTG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCAAAACTGTGCAAATTaGCTCCTCTCTTTAACAGAT +
Preference number: 4 (lower is better)
Translates to: QKSTDASWHGACSKPLVSQNCAN*LLSLTD
Trigger: ATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTGGGCAAGGGTCTGTTaGTCTGGTGAAAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHWARVC*SGEKAA
Trigger: AGCTGCTTTTTCACCAGACCAACAGACCCTTGCCCA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCTTTGGTGCTGGGTATaGTGTGGACACATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLLWCWV*CGHILF
Trigger: AAAGAGAATGTGTCCACATCATACCCAGCACCAAAG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCTTTGGTGCTGGGTATaGTGTGGACACATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERALWCWV*CGHILF
Trigger: AAAGAGAATGTGTCCACATCATACCCAGCACCAAAG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTCATTTTTCTCATTCTaGAGCACGGAGATACTGGGG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERASFFSF*STEILG
Trigger: CCCCAGTATCTCCGTGCTTCAGAATGAGAAAAATGA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTCATTTTTCTCATTCTaGAGCACGGAGATACTGGGG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWSFFSF*STEILG
Trigger: CCCCAGTATCTCCGTGCTTCAGAATGAGAAAAATGA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCCCATGGACAGAGATaGGAAGCTTGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLPHGQR*EAWEAP
Trigger: TGGAGCTTCCCAAGCTTCTCATCTCTGTCCATGGGG...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATCCCCATGGACAGAGATaGGAAGCTTGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHPHGQR*EAWEAP
Trigger: TGGAGCTTCCCAAGCTTCTCATCTCTGTCCATGGGG...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAAGGCATCGCCAACATaGCGAATAACACCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLKASPT*RITPVL
Trigger: TAACACAGGTGTTATTCGTCATGTTGGCGATGCCTT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTCGAGACTTAGAGGCATaGTCCTTCAAGGCATCGCCA +
Preference number: 4 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSRDLEA*SFKASP
Trigger: TGGCGATGCCTTGAAGGATCATGCCTCTAAGTCTCG...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCAACATCTCTTCCAATaGGGTCCTCCTGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDQHLFQ*GPPGFP
Trigger: TGGAAAACCAGGAGGACCTCATTGGAAGAGATGTTG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTCGTTGTCAGCCAGAATaGAGTGGGAATGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: DQAEAFSRRGPILSLQLIRCQPE*SGNACC
Trigger: ACAGCATGCATTCCCACTTCATTCTGGCTGACAACG...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCACCACAGGAACACCTTaGCCGATTCTTGTGTTTATC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLTTGTP*PILVFI
Trigger: GATAAACACAAGAATCGGTCAAGGTGTTCCTGTGGT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGATGATGAACAGATGCTaGGCTTGGGTTCGAGTGTAT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLMMNRC*AWVRVY
Trigger: ATACACTCGAACCCAAGCTCAGCATCTGTTCATCAT...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCTAGTCTGGAGATGGTaGGAAAACGGTGCATGCTTA +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLVWRW*ENGACL
Trigger: TAAGCATGCACCGTTTTCTCACCATCTCCAGACTAG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGTGGTACAATGTATTTaGGGGCCCATGTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAVVQCI*GPMSRI
Trigger: AATACGAGACATGGGCCCTCAAATACATTGTACCAC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTAAGTCTCTGGAATTGTaGTTCAGCTCCTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAKSLEL*FSSWEM
Trigger: CATTTCCCAGGAGCTGAATCACAATTCCAGAGACTT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGAAGTCTCTGGAATTGTaGTTCAGCTCCTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWKSLEL*FSSWEM
Trigger: CATTTCCCAGGAGCTGAATCACAATTCCAGAGACTT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCAACTTCCCTGGCTCTaGCATCAGAATCTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDQLPWL*HQNLSH
Trigger: ATGAGAGAGATTCTGATGTCAGAGCCAGGGAAGTTG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACAACTTCCCTGGCTCTaGCATCAGAATCTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPQLPWL*HQNLSH
Trigger: ATGAGAGAGATTCTGATGTCAGAGCCAGGGAAGTTG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCAACTTCCCTGGCTCTaGCATCAGAATCTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRQLPWL*HQNLSH
Trigger: ATGAGAGAGATTCTGATGTCAGAGCCAGGGAAGTTG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGCTCATCATCGGTTATaGAGAGTTTCAGGCCGTAGT +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSAHHRL*RVSGRS
Trigger: ACTACGGCCTGAAACTCTTCATAACCGATGATGAGC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGCTCATCATCGGTTATaGAGAGTTTCAGGCCGTAGT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSAHHRL*RVSGRS
Trigger: ACTACGGCCTGAAACTCTTCATAACCGATGATGAGC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACCTCTCATCATTAGATaGGTTGAACCGATCATCCTT +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQPLIIR*VEPIIL
Trigger: AAGGATGATCGGTTCAACTCATCTAATGATGAGAGG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTCCCTTCCTGGCTGTTaGAGCTGCTCTGACGGACAA +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMISLPGC*SCSDGQ
Trigger: TTGTCCGTCAGAGCAGCTTCAACAGCCAGGAAGGGA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGATGTCTATACACGATaGTGGTCTTCTGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLDVYTR*WSSGIR
Trigger: CCTGATTCCAGAAGACCATCATCGTGTATAGACATC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTGCATAGGCACTACTTaGAGGGGCTGTGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIACIGTT*RGCGRY
Trigger: GTACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGAGGTGGGTGTAGTCTaGAGAAAAAGATCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLEVGVV*RKRSSV
Trigger: GACACTAGATCTTTTTCTTCAGACTACACCCACCTC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATTGCTTGAGGGGCATTaGCACACCTTGTGTCAATAC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKLLEGH*HTLCQY
Trigger: GTATTGACACAAGGTGTGTCAATGCCCCTCAAGCAA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTTGCTTGAGGGGCATTaGCACACCTTGTGTCAATAC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSLLEGH*HTLCQY
Trigger: GTATTGACACAAGGTGTGTCAATGCCCCTCAAGCAA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCTGAGCCTGAGCACTaGTTCTGGGTACTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSEPEH*FWVLAK
Trigger: TTTTGCCAGTACCCAGAATCAGTGCTCAGGCTCAGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377105.5
CDS-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTTAGGGCTGGATTCTTaGGCCTTCTGTGGCGGATAT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMLGLDS*AFCGGY
Trigger: ATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTAGAATAAAGCAGGTATaGTTCAAGGAAAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFRIKQV*FKERGK
Trigger: TTTTCCCCTTTCCTTGAATCATACCTGCTTTATTCT...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCATGGCTTTCTGCTGTaGCTGCGGATACACATTCAT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDHGFLL*LRIHIH
Trigger: ATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCTTCATCAGTCACCAGTaGTGGAGCCAATGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLFISHQ*WSQCEK
Trigger: CTTTTCACATTGGCTCCATCACTGGTGACTGATGAA...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTTCATCAGTCACCAGTaGTGGAGCCAATGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLFISHQ*WSQCEK
Trigger: CTTTTCACATTGGCTCCATCACTGGTGACTGATGAA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTCATCAGTCACCAGTaGTGGAGCCAATGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWFISHQ*WSQCEK
Trigger: CTTTTCACATTGGCTCCATCACTGGTGACTGATGAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGCTGCCGGCTTATACTaGATAAAGAGGATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDAAGLY*IKRMLF
Trigger: GAAGAGCATCCTCTTTATTCAGTATAAGCCGGCAGC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAACAGAAGTGTTGGCATaGGAAGGATGTGGGACGTTA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPTEVLA*EGCGTL
Trigger: TAACGTCCCACATCCTTCTCATGCCAACACTTCTGT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCTTGTGGCACCAGAAGTaGATAGATAAGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLLWHQK*IDKRQV
Trigger: CACCTGTCTCTTATCTATTCACTTCTGGTGCCACAA...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGTCTTGGTTGAGCTACTaGAAACATAATCCACTCATA +
Preference number: 4 (lower is better)
Translates to: STHTLVSKQALGFFHGAWSWLSY*KHNPLI
Trigger: TATGAGTGGATTATGTTTTCAGTAGCTCAACCAAGA...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTCTAAGAAGATCAAGCTaGAGCGTTCTCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSLRRSS*SVLQEG
Trigger: CCCCTCCTGGAGAACGCTTCAGCTTGATCTTCTTAG...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp AATGAGCCGGGTTTCCTCATCTGTAAGATGAGGGTAATAATTGTACCTCTCTCATCTACCCAGAGTGGGTaGTCCACTGCATTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: NEPGFLICKMRVIIVPLSSTQSG*STALAS
Trigger: TGAAGCCAATGCAGTGGATCACCCACTCTGGGTAGA...TGAGAGAGGTACAATTATTACCCTCATCTTACAGATGAGGAAACCCGGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATACACGACATGAACGGTaGGAACAGAACATCCCACAT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDTRHER*EQNIPH
Trigger: ATGTGGGATGTTCTGTTCTCACCGTTCATGTCGTGT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGCAGAAGGCGAGCAGTaGGTCATTTTGACAACTCTA +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHAEGEQ*VILTTL
Trigger: TAGAGTTGTCAAAATGACTCACTGCTCGCCTTCTGC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGAGATTTGGCCTTCCTaGGAATCACAGAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSEIWPS*ESQRDG
Trigger: ACCATCTCTCTGTGATTCTCAGGAAGGCCAAATCTC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTTCAAACTCTGGTGCTaGGATTTGGCCTTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSFKLWC*DLAFLR
Trigger: TCTCAGGAAGGCCAAATCTCAGCACCAGAGTTTGAA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGCCCAACTGTTTGAGTaGATTCTTAACTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQAQLFE*ILNWLK
Trigger: CTTAAGCCAGTTAAGAATTCACTCAAACAGTTGGGC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGGTCCTGATTGGCACTaGCACTCTTTACAAAGCCTA +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHGPDWH*HSLQSL
Trigger: TAGGCTTTGTAAAGAGTGTCAGTGCCAATCAGGACC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTATCCAGGCACAAGGCTaGATTTCCCCCTTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSIQAQG*ISPFAP
Trigger: TGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGAT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTTTGGGAAGCTCCAACTaGCATTCCTTGGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: DQAEAFSRRGPILSLQLILGSSN*HSLVIR
Trigger: CCTGATGACCAAGGAATGGCAGTTGGAGCTTCCCAA...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTCCAGTTGTCATTGCTaGTTTGATGAGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLSSCHC*FDEPFP
Trigger: GGGAAAGGGCTCATCAAAGCAGCAATGACAACTGGA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTCCAGTTGTCATTGCTaGTTTGATGAGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDSSCHC*FDEPFP
Trigger: GGGAAAGGGCTCATCAAAGCAGCAATGACAACTGGA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGGGCAATACCTATGGTaGATATCTTTCCTCGAGACT +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLGQYLW*ISFLET
Trigger: AGTCTCGAGGAAAGATATGCACCATAGGTATTGCCC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGGGCAATACCTATGGTaGATATCTTTCCTCGAGACT +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAGQYLW*ISFLET
Trigger: AGTCTCGAGGAAAGATATGCACCATAGGTATTGCCC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGTTTCGTCCCAACATTaGTGTGAGCTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMVSSQH*CELHVL
Trigger: GAGGACATGGAGCTCACAGCAATGTTGGGACGAAAC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGGATTAACCGGTGCTTaGTCTGAACTTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLGLTGA*SELPLH
Trigger: ATGAAGAGGAAGTTCAGAGCAAGCACCGGTTAATCC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAATTCATAGATTTTTCTaGCGAGGGGGATTAACCGGT +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQIHRFF*RGGLTG
Trigger: ACCGGTTAATCCCCCTCGGCAGAAAAATCTATGAAT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAAGCCTTCATGGAGTaGTCTCTCTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMEAFME*SLSLTS
Trigger: GGAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACATGGTCTCCTCACCTaGAGGGTCTATACTCTCTTG +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGHGLLT*RVYTLL
Trigger: CAAGAGAGTATAGACCCTGCAGGTGAGGAGACCATG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATGTCCTCAAAATCAATaGTCCGGCTTGGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKCPQNQ*SGLEVC
Trigger: ACAGACCTCCAAGCCGGAGCATTGATTTTGAGGACA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTGTCCTCAAAATCAATaGTCCGGCTTGGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHCPQNQ*SGLEVC
Trigger: ACAGACCTCCAAGCCGGAGCATTGATTTTGAGGACA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTGTCCTCAAAATCAATaGTCCGGCTTGGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSCPQNQ*SGLEVC
Trigger: ACAGACCTCCAAGCCGGAGCATTGATTTTGAGGACA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCACCTCCCAAAGCATTaGTTGTTTTGCTCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWHLPKH*LFCSAK
Trigger: CTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCTGGGTCAGATCAAATaGTTTCTTGATCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLGQIK*FLDLWP
Trigger: GGGCCACAGATCAAGAAAGCATTTGATCTGACCCAG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCTGGGTCAGATCAAATaGTTTCTTGATCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLGQIK*FLDLWP
Trigger: GGGCCACAGATCAAGAAAGCATTTGATCTGACCCAG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCTGGGTCAGATCAAATaGTTTCTTGATCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLGQIK*FLDLWP
Trigger: GGGCCACAGATCAAGAAAGCATTTGATCTGACCCAG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGCTTTCTGCTGTGACTaGGGATACACATTCATCTCT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWAFCCD*GYTFIS
Trigger: AGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTCAGAAATCAACAGATaGCTCCTGGCATGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMSEINR*LLAWSV
Trigger: CACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATTTGCTGCTCATAAACTaGTTAATTCACAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHLLLIN*LIHKDR
Trigger: CCTGTCTTTGTGAATTAAGCAGTTTATGAGCAGCAA...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACACAAAATCACAACTTaGCTACCACAGCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPHKITT*LPQLAG
Trigger: TCCTGCGAGCTGTGGTAGGCAAGTTGTGATTTTGTG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTCTGAATTTCCCCCTTTaGCCCATAGGCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSLNFPL*PIGLSH
Trigger: GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAG...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATCCACAGCAACACCTATaGGGGTCTTTGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHPQQHL*GSLVLG
Trigger: ACCCAGCACCAAAGACCCCCATAGGTGTTGCTGTGG...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGACCACTTTTCAGACTaGATGTCATTTCGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPDHFSD*MSFRER
Trigger: CCTCTCCCGAAATGACATCCAGTCTGAAAAGTGGTC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGACCACTTTTCAGACTaGATGTCATTTCGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDDHFSD*MSFRER
Trigger: CCTCTCCCGAAATGACATCCAGTCTGAAAAGTGGTC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATATGGCTTTGTTGGAATaGCCACCTCCTTGGAACTCA +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDMALLE*PPPWNS
Trigger: TGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCAT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCATACTCGCACATACATaGCTTTGTTGGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLILAHT*LCWNGH
Trigger: GTGGCCATTCCAACAAAGCCATGTATGTGCGAGTAT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCCAACTGCCATTCCTTaGTCATCAGGTGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLPTAIP*SSGVRG
Trigger: TCCTCTTACACCTGATGACCAAGGAATGGCAGTTGG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCAGGGGGCAATACCTATaGTGCATATCTTTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSRGQYL*CISFLE
Trigger: CTCGAGGAAAGATATGCACCATAGGTATTGCCCCCT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTGGACATGGTCTGGTATaGCCGGACAACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSGHGLV*PDNISS
Trigger: GGAAGAGATGTTGTCCGGCCATACCAGACCATGTCC...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCATGGGATTGGACATaGTCTGGTATGGCCGGACAA +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSWDWT*SGMAGQ
Trigger: TTGTCCGGCCATACCAGACCATGTCCAATCCCATGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCTCCATATTTTCCAGTaGTCCCGTTGTCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLHIFQ*SRCQPE
Trigger: TTCTGGCTGACAACGGGACCACTGGAAAATATGGAG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCTCCATATTTTCCAGTaGTCCCGTTGTCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSLHIFQ*SRCQPE
Trigger: TTCTGGCTGACAACGGGACCACTGGAAAATATGGAG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGCCAAATCAATGTCCTaGTGTCCTTCTGATCCCATC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSAKSMS*CPSDPI
Trigger: GATGGGATCAGAAGGACACCAGGACATTGATTTGGC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCACATCCCTGACCAAGTaGTACAATGTATTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLTSLTK*YNVFEG
Trigger: GCCCTCAAATACATTGTACCACTTGGTCAGGGATGT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTACATCCCTGACCAAGTaGTACAATGTATTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERATSLTK*YNVFEG
Trigger: GCCCTCAAATACATTGTACCACTTGGTCAGGGATGT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGATCCAACCGAAACCTaGATACTCTCGCTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERADPTET*ILSLFD
Trigger: GTCAAAAAGCGAGAGTATCCAGGTTTCGGTTGGATC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377105.5
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGATCCAACCGAAACCTaGATACTCTCGCTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWDPTET*ILSLFD
Trigger: GTCAAAAAGCGAGAGTATCCAGGTTTCGGTTGGATC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377105.5
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCTTCTTCACGTTTCTTaGTTGTCTTTCTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLLLHVS*LSFFLA
Trigger: GGCGAGGAAGAAAGACAACCAAGAAACGTGAAGAAG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGCTGGCCAAAGTCTCTaGAATTGTGATTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLAGQSL*NCDSAP
Trigger: AGGAGCTGAATCACAATTCCAGAGACTTTGGCCAGC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTCGATCCATTCCTGGGTaGACGGCCAGCGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVRSIPG*TASVPS
Trigger: AGATGGAACGCTGGCCGTCCACCCAGGAATGGATCG...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTATTACGATCCATTCCTaGGTGGACGGCCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSITIHS*VDGQRS
Trigger: GGAACGCTGGCCGTCCACCCAGGAATGGATCGTAAT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTGCAGGGAGGCAGCTaGATTATTTTACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLQGGS*IILPSS
Trigger: AGAGGATGGTAAAATAATCCAGCTGCCTCCCTGCAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGAAGATGATCAGTGGTaGGGGCAGAACTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAEDDQW*GQNWPF
Trigger: GAAAGGCCAGTTCTGCCCCCACCACTGATCATCTTC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTCGGATGTCCACGGTCTaGAGTGAAGCCTTCATGGAG +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIRMSTV*SEAFME
Trigger: CTCCATGAAGGCTTCACTCCAGACCGTGGACATCCG...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGGGTCTATACTCTCTTaGAGCTTGAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPGSILS*SLKVFP
Trigger: AGGGAACACCTTCAAGCTCCAAGAGAGTATAGACCC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACGAGAAGTTGGGGACATaGTCTCCTCACCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYEKLGT*SPHLQG
Trigger: ACCCTGCAGGTGAGGAGACCATGTCCCCAACTTCTC...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTCTTTTGCTACAGAGTaGGAACTAGTAGCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSFATE*ELVARC
Trigger: ACACCGGGCTACTAGTTCCCACTCTGTAGCAAAAGA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATCTTTTGCTACAGAGTaGGAACTAGTAGCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKSFATE*ELVARC
Trigger: ACACCGGGCTACTAGTTCCCACTCTGTAGCAAAAGA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCTTTTGCTACAGAGTaGGAACTAGTAGCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSFATE*ELVARC
Trigger: ACACCGGGCTACTAGTTCCCACTCTGTAGCAAAAGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTACGATGATGGTCTTCTaGAATCAGGAACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERATMMVF*NQEQWP
Trigger: TGGCCATTGTTCCTGATTCCAGAAGACCATCATCGT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTACTTGAAGGGGCTGTaGAAGGTACTGGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAYLKGL*KVLELK
Trigger: TTTCAACTCCAGTACCTTCCACAGCCCCTTCAAGTA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTACTTGAAGGGGCTGTaGAAGGTACTGGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLYLKGL*KVLELK
Trigger: TTTCAACTCCAGTACCTTCCACAGCCCCTTCAAGTA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATTTTGGAACGCTCAATaGTGTGGTACATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKFWNAQ*CGTSEA
Trigger: AGCCTCCGATGTACCACACCATTGAGCGTTCCAAAA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGGTAGCGGCTACTTTTaGAACGCTCAATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMGSGYF*NAQWCG
Trigger: ACCACACCATTGAGCGTTCCAAAAGTAGCCGCTACC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAAGAAAGGGTGTGGTaGCTAGGTAGCGGCTACTTT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMEERVW*LGSGYF
Trigger: AAAGTAGCCGCTACCTAGCCACCACACCCTTTCTTC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCCCTCACTGTCAGAGCTaGGGTGACTCAGTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAPHCQS*GDSVLL
Trigger: AAGCAGAACTGAGTCACCCCAGCTCTGACAGTGAGG...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGAGTTATCACCCTCCTaGGAGGATATTGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLELSPS*EDIAMV
Trigger: CACCATTGCAATATCCTCCCAGGAGGGTGATAACTC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTGCATATGGCGCACTTaGCTCCTCTGCCGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMICIWRT*LLCRVA
Trigger: AGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTTTCCCCTGCTCTCATaGCTTTCTGCTGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAFPLLS*LSAVTA
Trigger: CGCAGTCACAGCAGAAAGCCATGAGAGCAGGGGAAA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTCAACAGATGCCTCCTaGCATGGAGCGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMISTDAS*HGACSK
Trigger: CTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACTCAACAGATGCCTCCTaGCATGGAGCGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYSTDAS*HGACSK
Trigger: CTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGA...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCATGCATACCAAATGTaGCTGAATGGAGGCACACTG +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSHAYQM*LNGGTL
Trigger: CAGTGTGCCTCCATTCAGCCACATTTGGTATGCATG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAAGGCTTCCTGGAACTTaGAAGACTAGTCAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPRLPGT*KTSQVA
Trigger: GGCTACTTGACTAGTCTTCCAAGTTCCAGGAAGCCT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTTCAGGAGGACGTGGTaGAGCCATGCAAATGATGAC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMFRRTW*SHANDD
Trigger: GTCATCATTTGCATGGCTCCACCACGTCCTCCTGAA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGTGTTCAGGAGGACGTaGTGGAGCCATGCAAATGAT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMVFRRT*WSHAND
Trigger: ATCATTTGCATGGCTCCACCACGTCCTCCTGAACAC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAGTGGTGTGAAAAATTaGCAGTTACGTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQSGVKN*QLRLGG
Trigger: ACCTCCAAGACGTAACTGCCAATTTTTCACACCACT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACCCAGAATGAGGCCTTaGAGGTGTTTGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPPRMRP*RCLMSM
Trigger: CATTGACATCAAACACCTCCAAGGCCTCATTCTGGG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGGTTTTAATGATGTGTaGGAAGCTGCGGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLGFNDV*EAAVKM
Trigger: CATCTTCACCGCAGCTTCCCACACATCATTAAAACC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGCAGACATGTTTGTTTaGCTAGGACAGTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQADMFV*LGQCLE
Trigger: TTCCAAACACTGTCCTAGCCAAACAAACATGTCTGC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCTTTGGTGCTGGGTATaGTGTGGACACATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSLWCWV*CGHILF
Trigger: AAAGAGAATGTGTCCACATCATACCCAGCACCAAAG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTCATTTTTCTCATTCTaGAGCACGGAGATACTGGGG +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSFFSF*STEILG
Trigger: CCCCAGTATCTCCGTGCTTCAGAATGAGAAAAATGA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATCCCAAAGACTTGCTTaGGTTTTGGCTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKSQRLA*VLAGVQ
Trigger: TTGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCCCAAAGACTTGCTTaGGTTTTGGCTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSQRLA*VLAGVQ
Trigger: TTGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTAAGGCATCGCCAACATaGCGAATAACACCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLKASPT*RITPVL
Trigger: TAACACAGGTGTTATTCGTCATGTTGGCGATGCCTT...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCGAGACTTAGAGGCATaGTCCTTCAAGGCATCGCCA +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLRDLEA*SFKASP
Trigger: TGGCGATGCCTTGAAGGATCATGCCTCTAAGTCTCG...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACAACATCTCTTCCAATaGGGTCCTCCTGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGQHLFQ*GPPGFP
Trigger: TGGAAAACCAGGAGGACCTCATTGGAAGAGATGTTG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCATGATGAACAGATGCTaGGCTTGGGTTCGAGTGTAT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSMMNRC*AWVRVY
Trigger: ATACACTCGAACCCAAGCTCAGCATCTGTTCATCAT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACTAGTCTGGAGATGGTaGGAAAACGGTGCATGCTTA +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGLVWRW*ENGACL
Trigger: TAAGCATGCACCGTTTTCTCACCATCTCCAGACTAG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGTGGTACAATGTATTTaGGGGCCCATGTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRVVQCI*GPMSRI
Trigger: AATACGAGACATGGGCCCTCAAATACATTGTACCAC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTAAGTCTCTGGAATTGTaGTTCAGCTCCTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLKSLEL*FSSWEM
Trigger: CATTTCCCAGGAGCTGAATCACAATTCCAGAGACTT...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACGTCCCAACATTGCTGTaGGCTCCATGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYVPTLL*APCPLP
Trigger: AGGAAGAGGACATGGAGCTCACAGCAATGTTGGGAC...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCTAACACGATATAGTTaGAGAGCATCAGGTATCCGA +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLTRYS*RASGIR
Trigger: TCGGATACCTGATGCTCTTCAACTATATCGTGTTAG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACAACTTCCCTGGCTCTaGCATCAGAATCTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGQLPWL*HQNLSH
Trigger: ATGAGAGAGATTCTGATGTCAGAGCCAGGGAAGTTG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGCTCATCATCGGTTATaGAGAGTTTCAGGCCGTAGT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMAHHRL*RVSGRS
Trigger: ACTACGGCCTGAAACTCTTCATAACCGATGATGAGC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCCTCTCATCATTAGATaGGTTGAACCGATCATCCTT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWPLIIR*VEPIIL
Trigger: AAGGATGATCGGTTCAACTCATCTAATGATGAGAGG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGATGTCTATACACGATaGTGGTCTTCTGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRDVYTR*WSSGIR
Trigger: CCTGATTCCAGAAGACCATCATCGTGTATAGACATC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGATGTCTATACACGATaGTGGTCTTCTGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHDVYTR*WSSGIR
Trigger: CCTGATTCCAGAAGACCATCATCGTGTATAGACATC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGAGGTGGGTGTAGTCTaGAGAAAAAGATCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRREVGVV*RKRSSV
Trigger: GACACTAGATCTTTTTCTTCAGACTACACCCACCTC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGAGGTGGGTGTAGTCTaGAGAAAAAGATCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDEVGVV*RKRSSV
Trigger: GACACTAGATCTTTTTCTTCAGACTACACCCACCTC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTGTCGAGTTTGTCACTaGTGGAGAAGCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIACRVCH*WRSSSW
Trigger: CCAGGAAGAGCTTCTCCATCAGTGACAAACTCGACA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCAAATGCTTTCTTaGTCTGTGGCCCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLDQMLS*SVAQKS
Trigger: TGACTTCTGGGCCACAGATCAAGAAAGCATTTGATC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGATCAAATGCTTTCTTaGTCTGTGGCCCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSDQMLS*SVAQKS
Trigger: TGACTTCTGGGCCACAGATCAAGAAAGCATTTGATC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGATCAAATGCTTTCTTaGTCTGTGGCCCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPDQMLS*SVAQKS
Trigger: TGACTTCTGGGCCACAGATCAAGAAAGCATTTGATC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCTGCCGGCTTATACTaGATAAAGAGGATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGAAGLY*IKRMLF
Trigger: GAAGAGCATCCTCTTTATTCAGTATAAGCCGGCAGC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTTGTGGCACCAGAAGTaGATAGATAAGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLWHQK*IDKRQV
Trigger: CACCTGTCTCTTATCTATTCACTTCTGGTGCCACAA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATTGTGGCACCAGAAGTaGATAGATAAGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPLWHQK*IDKRQV
Trigger: CACCTGTCTCTTATCTATTCACTTCTGGTGCCACAA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTCTATCCAGGATTTCTaGGCCTTCAGAAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHSIQDF*AFRSLT
Trigger: TGTCAGACTTCTGAAGGCTCAGAAATCCTGGATAGA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATCTATCCAGGATTTCTaGGCCTTCAGAAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPSIQDF*AFRSLT
Trigger: TGTCAGACTTCTGAAGGCTCAGAAATCCTGGATAGA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAAAAGCGAGACTAAATaGGATGTCCTGATAGTGAGT +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQKSETK*DVLIVS
Trigger: ACTCACTATCAGGACATCTCATTTAGTCTCGCTTTT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTCCAGTGCATGTTTGCTaGGAGGGAAATAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSPVHVC*EGNSQR
Trigger: ACGCTGGCTATTTCCCTCTCAGCAAACATGCACTGG...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTTCAAACTCTGGTGCTaGGATTTGGCCTTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMFKLWC*DLAFLR
Trigger: TCTCAGGAAGGCCAAATCTCAGCACCAGAGTTTGAA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAATAGAGCATGATGGATaGCCGGGTAATATTTATCAT +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPIEHDG*PGNIYH
Trigger: ATGATAAATATTACCCGGTCATCCATCATGCTCTAT...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTGGTTGACTCCAATCTaGGAGACAGAATATCCAACT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLWLTPI*ETEYPT
Trigger: AGTTGGATATTCTGTCTCTCAGATTGGAGTCAACCA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAAGCCTTTCTTTTGGTTaGCTCCAATCTGAGAGACAG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPSLSFG*LQSERQ
Trigger: CTGTCTCTCAGATTGGAGTCAACCAAAAGAAAGGCT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACTGTGGGAAGCTGCGGTaGAGATGTGTAGGACTCTTG +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYCGKLR*RCVGLL
Trigger: CAAGAGTCCTACACATCTTCACCGCAGCTTCCCACA...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACGCCCCTCCATGTGTTTaGATTTGCAGCCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYAPPCV*ICSLSV
Trigger: GACTGAGAGGCTGCAAATTCAAACACATGGAGGGGC...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAAGCTGCCTTTGTAGGTaGGAGCCAGGCAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQSCLCR*EPGRKE
Trigger: CTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCT...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCCAGTTGTCATTGCTaGTTTGATGAGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSSCHC*FDEPFP
Trigger: GGGAAAGGGCTCATCAAAGCAGCAATGACAACTGGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGGGCAATACCTATGGTaGATATCTTTCCTCGAGACT +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSGQYLW*ISFLET
Trigger: AGTCTCGAGGAAAGATATGCACCATAGGTATTGCCC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGGGCAATACCTATGGTaGATATCTTTCCTCGAGACT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPGQYLW*ISFLET
Trigger: AGTCTCGAGGAAAGATATGCACCATAGGTATTGCCC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCATTCTGGAGTGAAATATaGTTTTCCAGTTGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPFWSEI*FSSCLR
Trigger: TCGAAGACAACTGGAAAAGCATATTTCACTCCAGAA...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCTTCTGAGTATTTATaGCCAAAGGCCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSSEYL*PKARMS
Trigger: GGACATCCTGGCCTTTGGGCATAAATACTCAGAAGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTCTTCTGAGTATTTATaGCCAAAGGCCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDSSEYL*PKARMS
Trigger: GGACATCCTGGCCTTTGGGCATAAATACTCAGAAGA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCATGGTGAGAAAACGGTaGATGCTTACTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLMVRKR*MLTPFS
Trigger: AGAGAATGGAGTAAGCATGCACCGTTTTCTCACCAT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTAACAGGGCCATCTTCTaGCGCTTCATGAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMINRAIF*RFMRTA
Trigger: GGCTGTTCTCATGAAGCGGCAGAAGATGGCCCTGTT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGTTTCGTCCCAACATTaGTGTGAGCTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAVSSQH*CELHVL
Trigger: GAGGACATGGAGCTCACAGCAATGTTGGGACGAAAC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGGATTAACCGGTGCTTaGTCTGAACTTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPGLTGA*SELPLH
Trigger: ATGAAGAGGAAGTTCAGAGCAAGCACCGGTTAATCC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGGATTAACCGGTGCTTaGTCTGAACTTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKGLTGA*SELPLH
Trigger: ATGAAGAGGAAGTTCAGAGCAAGCACCGGTTAATCC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGGATTAACCGGTGCTTaGTCTGAACTTCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRGLTGA*SELPLH
Trigger: ATGAAGAGGAAGTTCAGAGCAAGCACCGGTTAATCC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTGTCCTCAAAATCAATaGTCCGGCTTGGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMCPQNQ*SGLEVC
Trigger: ACAGACCTCCAAGCCGGAGCATTGATTTTGAGGACA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTTGCAATGGTGGCTCTaGGGCCTTTGGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMILQWWL*GLWPHS
Trigger: AGAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTCTTGCTGTGTTCCGCTaGCTGTCGAGTTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMILAVFR*LSSLSL
Trigger: CAGTGACAAACTCGACAGGCAGCGGAACACAGCAAG...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCACCTCCCAAAGCATTaGTTGTTTTGCTCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSHLPKH*LFCSAK
Trigger: CTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCACCTCCCAAAGCATTaGTTGTTTTGCTCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDHLPKH*LFCSAK
Trigger: CTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCACCTCCCAAAGCATTaGTTGTTTTGCTCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSHLPKH*LFCSAK
Trigger: CTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGCTTTCTGCTGTGACTaGGGATACACATTCATCTCT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDAFCCD*GYTFIS
Trigger: AGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCTCCTGGCATGGAGCGTaGTCGAAGCCCCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFSWHGA*SKPLVS
Trigger: GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGA...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTAGAAGAGGGACAGCCTaGACAAAACAGCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSRRGTA*TKQPVV
Trigger: GACCACAGGCTGTTTTGTGCAGGCTGTCCCTCTTCT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATATTCTCAGACCCAGTaGATGTTTGCTGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKYSQTQ*MFAERE
Trigger: TTCCCTCTCAGCAAACATGCACTGGGTCTGAGAATA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGATCAGGAACAAAAATaGCCGGTTCACAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWDQEQK*PVHKDA
Trigger: AGCATCTTTGTGAACCGGGCATTTTTGTTCCTGATC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCACAAAATCACAACTTaGCTACCACAGCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMHKITT*LPQLAG
Trigger: TCCTGCGAGCTGTGGTAGGCAAGTTGTGATTTTGTG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGTCTTTTGCATAACATaGCAGTTCATCTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: VRNQQMPPGMERARSPLFVFCIT*QFIFHK
Trigger: TTTGTGAAAGATGAACTGGCATGTTATGCAAAAGAC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGACATTCACAGCGATCTaGGCACTTCTGCACTATCAC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMTFTAI*ALLHYH
Trigger: GTGATAGTGCAGAAGTGCGCAGATCGCTGTGAATGT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACAAAGTCTAAATGTTTaGCTTTTTCCAAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPQSLNV*LFPSGR
Trigger: GCGGCCGCTTGGAAAAAGGCAAACATTTAGACTTTG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGCCTCTCAGTCTATGTaGAGATGGCTGGTTTTAATG +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSASQSM*RWLVLM
Trigger: CATTAAAACCAGCCATCTGCACATAGACTGAGAGGC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGGTGAGGCCAACATGCTaGCCTATCAGACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: ETHFALILDSSRISYVSPVRPTC*PIRRPQ
Trigger: CTGTGGGCGTCTGATAGGCCAGCATGTTGGCCTCAC...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTATGGCTTTGTTGGAATaGCCACCTCCTTGGAACTCA +
Preference number: 4 (lower is better)
Translates to: DQAEAFSRRGPILSLQLIMALLE*PPPWNS
Trigger: TGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCAT...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAATACTCGCACATACATaGCTTTGTTGGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKILAHT*LCWNGH
Trigger: GTGGCCATTCCAACAAAGCCATGTATGTGCGAGTAT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGATACTCGCACATACATaGCTTTGTTGGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRILAHT*LCWNGH
Trigger: GTGGCCATTCCAACAAAGCCATGTATGTGCGAGTAT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGATTCTGCAGGCCCCCATaGACAGAGATGAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGFCRPP*TEMRSL
Trigger: CAAGCTTCTCATCTCTGTCCATGGGGGCCTGCAGAA...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATTTCTGCAGGCCCCCATaGACAGAGATGAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHFCRPP*TEMRSL
Trigger: CAAGCTTCTCATCTCTGTCCATGGGGGCCTGCAGAA...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTTCTGCAGGCCCCCATaGACAGAGATGAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIFCRPP*TEMRSL
Trigger: CAAGCTTCTCATCTCTGTCCATGGGGGCCTGCAGAA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTTCTGCAGGCCCCCATaGACAGAGATGAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSFCRPP*TEMRSL
Trigger: CAAGCTTCTCATCTCTGTCCATGGGGGCCTGCAGAA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTGCTTGAGTTTTGGCTaGAGTTCAAAGTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHCLSFG*SSKFCR
Trigger: CCTGCAGAACTTTGAACTCCAGCCAAAACTCAAGCA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGACTTGCTTGAGTTTTaGCTGGAGTTCAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWDLLEF*LEFKVL
Trigger: CAGAACTTTGAACTCCAGCCAAAACTCAAGCAAGTC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGAGGGGGCAATACCTATaGTGCATATCTTTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMRGQYL*CISFLE
Trigger: CTCGAGGAAAGATATGCACCATAGGTATTGCCCCCT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTCCAATGAGGTCCTCCTaGTTTTCCACAATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSPMRSS*FSTIPQ
Trigger: CTGGGGAATTGTGGAAAACCAGGAGGACCTCATTGG...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGGACATGGTCTGGTATaGCCGGACAACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIGHGLV*PDNISS
Trigger: GGAAGAGATGTTGTCCGGCCATACCAGACCATGTCC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTGGACATGGTCTGGTATaGCCGGACAACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSGHGLV*PDNISS
Trigger: GGAAGAGATGTTGTCCGGCCATACCAGACCATGTCC...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGAGCCGGGTTTCCTCATCTGTAAGATGAGGGTAATAATTGTACCTCTCTCAGGATTGGACATGGTCTaGTATGGCCGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: NEPGFLICKMRVIIVPLSGLDMV*YGRTTS
Trigger: AGATGTTGTCCGGCCATACCAGACCATGTCCAATCC...TGAGAGAGGTACAATTATTACCCTCATCTTACAGATGAGGAAACCCGGCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGAGCTTGCTCATGGGATTaGACATGGTCTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGACSWD*TWSGMA
Trigger: GGCCATACCAGACCATGTCCAATCCCATGAGCAAGC...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCTCCATATTTTCCAGTaGTCCCGTTGTCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMLHIFQ*SRCQPE
Trigger: TTCTGGCTGACAACGGGACCACTGGAAAATATGGAG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGATCACAGACAACCACTaGCACGGGAGGGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLITDNH*HGRGVS
Trigger: CGAGACACCCCTCCCGTGCCAGTGGTTGTCTGTGAT...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCCAAATCAATGTCCTaGTGTCCTTCTGATCCCATC +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGAKSMS*CPSDPI
Trigger: GATGGGATCAGAAGGACACCAGGACATTGATTTGGC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGCCAAATCAATGTCCTaGTGTCCTTCTGATCCCATC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMAKSMS*CPSDPI
Trigger: GATGGGATCAGAAGGACACCAGGACATTGATTTGGC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTAAAGCTAAGCTCAGTTaGTCTGGGGCCGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIKAKLS*SGAEAL
Trigger: CAATGCCTCGGCCCCAGACCAACTGAGCTTAGCTTT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAACATCCCTGACCAAGTaGTACAATGTATTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKTSLTK*YNVFEG
Trigger: GCCCTCAAATACATTGTACCACTTGGTCAGGGATGT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCTTCTTCACGTTTCTTaGTTGTCTTTCTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSLLHVS*LSFFLA
Trigger: GGCGAGGAAGAAAGACAACCAAGAAACGTGAAGAAG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGAAAGGGAAGGGGAAGTaGTTGATCTCAGGATCATCC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMKGKGK*LISGSS
Trigger: GGATGATCCTGAGATCAACCACTTCCCCTTCCCTTT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTCACACCATGAGCTCATaGAAAGGGAAGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIHTMSS*KGKGKW
Trigger: CCACTTCCCCTTCCCTTTCCATGAGCTCATGGTGTG...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCTGGCCAAAGTCTCTaGAATTGTGATTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGAGQSL*NCDSAP
Trigger: AGGAGCTGAATCACAATTCCAGAGACTTTGGCCAGC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTATTACGATCCATTCCTaGGTGGACGGCCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVITIHS*VDGQRS
Trigger: GGAACGCTGGCCGTCCACCCAGGAATGGATCGTAAT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTTGCAGGGAGGCAGCTaGATTATTTTACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSLQGGS*IILPSS
Trigger: AGAGGATGGTAAAATAATCCAGCTGCCTCCCTGCAA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTTGCAGGGAGGCAGCTaGATTATTTTACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHLQGGS*IILPSS
Trigger: AGAGGATGGTAAAATAATCCAGCTGCCTCCCTGCAA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGGGTCTATACTCTCTTaGAGCTTGAAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMGSILS*SLKVFP
Trigger: AGGGAACACCTTCAAGCTCCAAGAGAGTATAGACCC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATACGATGATGGTCTTCTaGAATCAGGAACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDTMMVF*NQEQWP
Trigger: TGGCCATTGTTCCTGATTCCAGAAGACCATCATCGT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTACTTGAAGGGGCTGTaGAAGGTACTGGAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRYLKGL*KVLELK
Trigger: TTTCAACTCCAGTACCTTCCACAGCCCCTTCAAGTA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTGGAGAAGCTCTTCCTaGTGTGTGCATATGGCGCAC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIWRSSS*CVHMAH
Trigger: GTGCGCCATATGCACACACCAGGAAGAGCTTCTCCA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTACTGATTCTGGGTACTaGCAAAAGCAGTCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLTDSGY*QKQSPE
Trigger: CTCCGGGGACTGCTTTTGCCAGTACCCAGAATCAGT...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCAATTACAGAAGTGTTaGCATGAGAAGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLQLQKC*HEKDVG
Trigger: TCCCACATCCTTCTCATGCCAACACTTCTGTAATTG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAACTACGAGCAAACATaGTTCCTTTCCCTCATAATC +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQNYEQT*FLSLII
Trigger: GATTATGAGGGAAAGGAACCATGTTTGCTCGTAGTT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTGCACAGGAAGGAAATaGCTCATGGAAGTTACACAG +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDCTGRK*LMEVTQ
Trigger: CTGTGTAACTTCCATGAGCCATTTCCTTCCTGTGCA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTATGTGGTGGAATCAATaGGCTGAGCATAAGCTGACT +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLMWWNQ*AEHKLT
Trigger: AGTCAGCTTATGCTCAGCCCATTGATTCCACCACAT...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCACAACACCTAGACCTTaGCAGACCCAAGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIATTPRP*QTQEVL
Trigger: CAACACCTCTTGGGTCTGCCAAGGTCTAGGTGTTGT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGGTATAAAGGTAATGTaGGCAAGGGTCTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDGIKVM*ARVCWS
Trigger: AGACCAACAGACCCTTGCCCACATTACCTTTATACC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGCAGACATGTTTGTTTaGCTAGGACAGTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLADMFV*LGQCLE
Trigger: TTCCAAACACTGTCCTAGCCAAACAAACATGTCTGC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 72 bp TCCAGGAGGGGACCAATTTTATCACTTCAACTCATTTaGTTGAGGCAGTCAGAGCGTTTGGATGAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SRRGPILSLQLI*LRQSERLDELQ
Trigger: TTGGAGCTCATCCAAACGCTCTGACTGCCTCAACAAAATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
3UTR CAA 72 bp CATACACATGTCTTTTCAGTTTCCAGCACACAAACATaGTGCAAACGCACAAGGGCCTGCAGGTTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: HTHVFSVSSTQT*CKRTRACRFKE
Trigger: CTCCTTAAACCTGCAGGCCCTTGTGCGTTTGCACAATGTTTGTGTGCTGGAAACTGAAAAGACATGTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 72 bp ACAGTGGATCTTGAGTCCAAGCAAAGGAATGTGATCTaGACCTGTAGGTCAGGGGTCTTCAATGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: TVDLESKQRNVI*TCRSGVFNGVS
Trigger: TGAAACTCCATTGAAGACCCCTGACCTACAGGTCAAGATCACATTCCTTTGCTTGGACTCAAGATCCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCCCAAAGACTTGCTTaGGTTTTGGCTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSQRLA*VLAGVQ
Trigger: TTGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTAAGGCATCGCCAACATaGCGAATAACACCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: DQAEAFSRRGPILSLQLIKASPT*RITPVL
Trigger: TAACACAGGTGTTATTCGTCATGTTGGCGATGCCTT...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCGTTGTCAGCCAGAATaGAGTGGGAATGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLRCQPE*SGNACC
Trigger: ACAGCATGCATTCCCACTTCATTCTGGCTGACAACG...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTCAGTCCGCCTTCTTCTaGGTATTTATGCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSQSAFF*VFMPKG
Trigger: GCCTTTGGGCATAAATACTCAGAAGAAGGCGGACTG...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGATGATGAACAGATGCTaGGCTTGGGTTCGAGTGTAT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMMMNRC*AWVRVY
Trigger: ATACACTCGAACCCAAGCTCAGCATCTGTTCATCAT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAATGATGAACAGATGCTaGGCTTGGGTTCGAGTGTAT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGMMNRC*AWVRVY
Trigger: ATACACTCGAACCCAAGCTCAGCATCTGTTCATCAT...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGTGGTACAATGTATTTaGGGGCCCATGTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGVVQCI*GPMSRI
Trigger: AATACGAGACATGGGCCCTCAAATACATTGTACCAC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTAATTACCTTGAGGCCTaGGTTCTTGCGCATGCGGAG +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVNYLEA*VLAHAE
Trigger: CTCCGCATGCGCAAGAACTCAGGCCTCAAGGTAATT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTTCCCAGAATTACCTTaGGGCCTGAGTTCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIFPELP*GLSSCA
Trigger: TGCGCAAGAACTCAGGCCTCAAGGTAATTCTGGGAA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTTCCCAGAATTACCTTaGGGCCTGAGTTCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSFPELP*GLSSCA
Trigger: TGCGCAAGAACTCAGGCCTCAAGGTAATTCTGGGAA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACAACCGGTGCTTGCTCTaGACTTCCTCTTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYNRCLL*TSSSSF
Trigger: GAAGGATGAAGAGGAAGTTCAGAGCAAGCACCGGTT...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACTAACACGATATAGTTaGAGAGCATCAGGTATCCGA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPLTRYS*RASGIR
Trigger: TCGGATACCTGATGCTCTTCAACTATATCGTGTTAG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACCTCTCATCATTAGATaGGTTGAACCGATCATCCTT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPPLIIR*VEPIIL
Trigger: AAGGATGATCGGTTCAACTCATCTAATGATGAGAGG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGAAAACATAAAGCTATaGGATTTCACAATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLENIKL*DFTMGA
Trigger: GGCTCCCATTGTGAAATCTCATAGCTTTATGTTTTC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTGTCGAGTTTGTCACTaGTGGAGAAGCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSCRVCH*WRSSSW
Trigger: CCAGGAAGAGCTTCTCCATCAGTGACAAACTCGACA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTACCACAGGAACACCTTaGCCGATTCCAACTGAGTCT +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMITTGTP*PIPTES
Trigger: AGACTCAGTTGGAATCGGTCAAGGTGTTCCTGTGGT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360823.6
CDS-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACCATCAGCCTGATTCATaGCCCCTTCCAAATTCCACC +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYHQPDS*PLPNST
Trigger: GGTGGAATTTGGAAGGGGTCATGAATCAGGCTGATG...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTGGTATGCTTGCAACTaGTGGCTTTGGGTTGATACC +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAWYACN*WLWVDT
Trigger: GGTATCAACCCAAAGCCATCAGTTGCAAGCATACCA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCAAGATCAGGACTGTTaGGTATTTCGTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLQDQDC*VFRFPV
Trigger: AACTGGGAAACGAAATACTCAACAGTCCTGATCTTG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCAAGATCAGGACTGTTaGGTATTTCGTTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSQDQDC*VFRFPV
Trigger: AACTGGGAAACGAAATACTCAACAGTCCTGATCTTG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTCCTTGAGCTCTCTATaGCTTTATTTACGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSLSSL*LYLRSS
Trigger: TGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGTGCATGCATTTTGTTaGCACAAAATTAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: GPEVTFELTPPKALLVLLVHAFC*HKIKTR
Trigger: CCTGGTCTTAATTTTGTGTCAACAAAATGCATGCAC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGTGCATGCATTTTGTTaGCACAAAATTAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAVHAFC*HKIKTR
Trigger: CCTGGTCTTAATTTTGTGTCAACAAAATGCATGCAC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAAAATCCTCTCTTAGATaGCCTGTAGAAACAGTCACG +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKKSSLR*PVETVT
Trigger: CGTGACTGTTTCTACAGGTCATCTAAGAGAGGATTT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTGGAAGGCATGGGTCCTaGTTGGCACTGACACTCTTT +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVGRHGS*LALTLF
Trigger: AAAGAGTGTCAGTGCCAATCAGGACCCATGCCTTCC...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTATTGCCTTTGGGACTaGATGCTGCTGGCAGACATG +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSYCLWD*MLLADM
Trigger: CATGTCTGCCAGCAGCATTCAGTCCCAAAGGCAATA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGATGGTACTCTTCTTCTaGATCTCTCTCACAAAGACT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLMVLFF*ISLTKT
Trigger: AGTCTTTGTGAGAGAGATTCAGAAGAAGAGTACCAT...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTGGAAGGTTTGTTGAGTaGGAGCTGGCTCTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSGRFVE*ELALEK
Trigger: TTTCTCTAGAGCCAGCTCTCACTCAACAAACCTTCC...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGGGCAGAGAAGCCTTGTaGCAGCAGGAAGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLGREAL*QQEVLG
Trigger: TCCAAGCACTTCCTGCTGTCACAAGGCTTCTCTGCC...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCCGCTCCAGTTGTCATTaGTGCTTTGATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIARSSCH*CFDEPF
Trigger: AAAGGGCTCATCAAAGCAGCAATGACAACTGGAGCG...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTTCCTTCCACTATGAGTaGCACCACAGGAACACCTTG +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLSFHYE*HHRNTL
Trigger: CAAGGTGTTCCTGTGGTGGCACTCATAGTGGAAGGA...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR GCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTCCTTCCACTATGAGTaGCACCACAGGAACACCTTG +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSSFHYE*HHRNTL
Trigger: CAAGGTGTTCCTGTGGTGGCACTCATAGTGGAAGGA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGATGGTGAGAAAACGGTaGATGCTTACTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRMVRKR*MLTPFS
Trigger: AGAGAATGGAGTAAGCATGCACCGTTTTCTCACCAT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGTTTCGTCCCAACATTaGTGTGAGCTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIVSSQH*CELHVL
Trigger: GAGGACATGGAGCTCACAGCAATGTTGGGACGAAAC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGATTCATAGATTTTTCTaGCGAGGGGGATTAACCGGT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRIHRFF*RGGLTG
Trigger: ACCGGTTAATCCCCCTCGGCAGAAAAATCTATGAAT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAATTCATAGATTTTTCTaGCGAGGGGGATTAACCGGT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPIHRFF*RGGLTG
Trigger: ACCGGTTAATCCCCCTCGGCAGAAAAATCTATGAAT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGAAGCCTTCATGGAGTaGTCTCTCTCGTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIEAFME*SLSLTS
Trigger: GGAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCAGCTTTGGGTTCTTTTaGTACAGAGTGGGAACTAGT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSFGFF*YRVGTS
Trigger: ACTAGTTCCCACTCTGTAGCAAAAGAACCCAAAGCT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTAGCTCTGTCCGCAATTaGTTGAGGGGCATTGACACA +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMISSVRN*LRGIDT
Trigger: TGTGTCAATGCCCCTCAAGCAATTGCGGACAGAGCT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTAGCTCTGTCCGCAATTaGTTGAGGGGCATTGACACA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSSSVRN*LRGIDT
Trigger: TGTGTCAATGCCCCTCAAGCAATTGCGGACAGAGCT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAGGTTTAGTTGTGCTTaGTTTCAAAGCTTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQRFSCA*FQSFGK
Trigger: CTTTCCAAAGCTTTGAAAGCAAGCACAACTAAACCT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCTTTCTGCTGTGACTaGGGATACACATTCATCTCT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGAFCCD*GYTFIS
Trigger: AGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTGCTCTCATGGCTTTCTaGTGTGACTGCGGATACACA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSALMAF*CDCGYT
Trigger: TGTGTATCCGCAGTCACAGCAGAAAGCCATGAGAGC...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGGTAGAACTGCTTGCTaGCGGCTTATACTGAATAAA +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSGRTAC*RLILNK
Trigger: TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGGTAGAACTGCTTGCTaGCGGCTTATACTGAATAAA +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHGRTAC*RLILNK
Trigger: TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTTAGGTAGAACTGCTTaGTGCCGGCTTATACTGAAT +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLGRTA*CRLILN
Trigger: ATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATGCATATATCACAGATaGACAACACCTAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPCIYHR*TTPRPW
Trigger: CCAAGGTCTAGGTGTTGTGCATCTGTGATATATGCA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCGATCTGCGCACTTCTaGACTATCACAAATGGACTT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMRSAHF*TITNGL
Trigger: AAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACGATCTGCGCACTTCTaGACTATCACAAATGGACTT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGRSAHF*TITNGL
Trigger: AAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATTTAGAACCACCCAGTaGTTCATCAGACACCCAAAC +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGFRTTQ*FIRHPN
Trigger: GTTTGGGTGTCTGATGAAGCACTGGGTGGTTCTAAA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTCACCTCATTCTTATTaGCATCTGGATTACCTGGTC +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLSPHSY*HLDYLV
Trigger: GACCAGGTAATCCAGATGGCAATAAGAATGAGGTGA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTCACCTCATTCTTATTaGCATCTGGATTACCTGGTC +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDSPHSY*HLDYLV
Trigger: GACCAGGTAATCCAGATGGCAATAAGAATGAGGTGA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACAAAGTCTAAATGTTTaGCTTTTTCCAAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGQSLNV*LFPSGR
Trigger: GCGGCCGCTTGGAAAAAGGCAAACATTTAGACTTTG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTTGGGACTGAATGCTaGTGGCAGACATGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRFGTEC*WQTCLF
Trigger: AAACAAACATGTCTGCCAGCAGCATTCAGTCCCAAA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAATGTGACAGCAGGAAGTaGTTGGAGAACAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQCDSRK*LENSGE
Trigger: CTCCCCACTGTTCTCCAAGCACTTCCTGCTGTCACA...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCCCACAGCAACACCTATaGGGGTCTTTGGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFPQQHL*GSLVLG
Trigger: ACCCAGCACCAAAGACCCCCATAGGTGTTGCTGTGG...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTATGGCTTTGTTGGAATaGCCACCTCCTTGGAACTCA +
Preference number: 4 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSMALLE*PPPWNS
Trigger: TGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCAT...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAATACTCGCACATACATaGCTTTGTTGGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGILAHT*LCWNGH
Trigger: GTGGCCATTCCAACAAAGCCATGTATGTGCGAGTAT...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTCCAACTGCCATTCCTTaGTCATCAGGTGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSPTAIP*SSGVRG
Trigger: TCCTCTTACACCTGATGACCAAGGAATGGCAGTTGG...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAATTCTGCAGGCCCCCATaGACAGAGATGAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQFCRPP*TEMRSL
Trigger: CAAGCTTCTCATCTCTGTCCATGGGGGCCTGCAGAA...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATGCTTGAGTTTTGGCTaGAGTTCAAAGTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGCLSFG*SSKFCR
Trigger: CCTGCAGAACTTTGAACTCCAGCCAAAACTCAAGCA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGACTTGCTTGAGTTTTaGCTGGAGTTCAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRDLLEF*LEFKVL
Trigger: CAGAACTTTGAACTCCAGCCAAAACTCAAGCAAGTC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTAGGGGGCAATACCTATaGTGCATATCTTTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSRGQYL*CISFLE
Trigger: CTCGAGGAAAGATATGCACCATAGGTATTGCCCCCT...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGATCATGGGATTGGACATaGTCTGGTATGGCCGGACAA +
Preference number: 4 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGSWDWT*SGMAGQ
Trigger: TTGTCCGGCCATACCAGACCATGTCCAATCCCATGA...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATTCATGGGATTGGACATaGTCTGGTATGGCCGGACAA +
Preference number: 4 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHSWDWT*SGMAGQ
Trigger: TTGTCCGGCCATACCAGACCATGTCCAATCCCATGA...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTCTCCATATTTTCCAGTaGTCCCGTTGTCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSLHIFQ*SRCQPE
Trigger: TTCTGGCTGACAACGGGACCACTGGAAAATATGGAG...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGAATATCATGGTCATGTaGCTGAAGATGATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWNIMVM*LKMISG
Trigger: ACCACTGATCATCTTCAGCCACATGACCATGATATT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGACGATGATGGTCTTCTaGAATCAGGAACAATGGCCA +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMTMMVF*NQEQWP
Trigger: TGGCCATTGTTCCTGATTCCAGAAGACCATCATCGT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACTTGGAGGTCTGTCTGTaGGTGCAAGTGTTGCATAGG +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYLEVCL*VQVLHR
Trigger: CCTATGCAACACTTGCACCCACAGACAGACCTCCAA...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTTTTGGAACGCTCAATaGTGTGGTACATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAFWNAQ*CGTSEA
Trigger: AGCCTCCGATGTACCACACCATTGAGCGTTCCAAAA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCCTGCCGAGTAGCTGTTaGCGCGCTCTATCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFLPSSC*RALSWE
Trigger: TTCCCAAGATAGAGCGCGCCAACAGCTACTCGGCAG...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTGGAAAGCCGATGTTCTaGACAGTCTCCTCATGGACA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSGKPMF*TVSSWT
Trigger: TGTCCATGAGGAGACTGTCCAGAACATCGGCTTTCC...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTGCTTTCAAAGCTTTaGAAAGCCGATGTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLLSKL*KADVLD
Trigger: GTCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCAA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATTGCTTTCAAAGCTTTaGAAAGCCGATGTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKLLSKL*KADVLD
Trigger: GTCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCAA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACCAACTGAGTCTAACTaGCAACTACCCCAAAATGAA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPPTESN*QLPQNE
Trigger: TTCATTTTGGGGTAGTTGCCAGTTAGACTCAGTTGG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360823.6
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACAATTACAGAAGTGTTaGCATGAGAAGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPQLQKC*HEKDVG
Trigger: TCCCACATCCTTCTCATGCCAACACTTCTGTAATTG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAACAGAACATCCCACATaGCAATTTCAGGCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPTEHPT*QFQASS
Trigger: AGAACTAGCCTGAAATTGCCATGTGGGATGTTCTGT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGTCTGTAACACTAGCTaGTTTAAAGTTGCGTGTCTA +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLVCNTS*FKVACL
Trigger: TAGACACGCAACTTTAAACCAGCTAGTGTTACAGAC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCTGCACTATCACAAATaGACTTTTCGCTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLHYHK*TFRSHL
Trigger: GAGATGAGAGCGAAAAGTCCATTTGTGATAGTGCAG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATAGAAAGTTTTTCCCGTaGTATCTGCCAACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDRKFFP*YLPTSA
Trigger: AGCAGAAGTTGGCAGATACCACGGGAAAAACTTTCT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 72 bp CTTCCAATCTGGCCCAGAATGAGGCCTTGGAGGTGTTaGATGTCAATGAATAATGTTTTCACCTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LPIWPRMRPWRC*MSMNNVFTSFL
Trigger: CAAGAAGGAGGTGAAAACATTATTCATTGACATCAAACACCTCCAAGGCCTCATTCTGGGCCAGATTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 72 bp AAATGGACTTTTCGCTCTCATCTCCGGCTTAGCAATTaGCACCCAGTAGCTCTGAAGAATCAGAAATGTGTC +
Preference number: 4 (lower is better)
Translates to: KWTFRSHLRLSN*HPVALKNQKCV
Trigger: GACACATTTCTGATTCTTCAGAGCTACTGGGTGCAAATTGCTAAGCCGGAGATGAGAGCGAAAAGTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTCCGTAGGGCTGAGTTaGGTGTGTTTGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: ETHFALILDSSRISYVSPSVGLS*VCLLMD
Trigger: GTCCATCAGCAAACACACTCAACTCAGCCCTACGGA...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGTCCGTAGGGCTGAGTTaGGTGTGTTTGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLSVGLS*VCLLMD
Trigger: GTCCATCAGCAAACACACTCAACTCAGCCCTACGGA...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCAACATCTCTTCCAATaGGGTCCTCCTGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLQHLFQ*GPPGFP
Trigger: TGGAAAACCAGGAGGACCTCATTGGAAGAGATGTTG...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCACCACAGGAACACCTTaGCCGATTCTTGTGTTTATC +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIATTGTP*PILVFI
Trigger: GATAAACACAAGAATCGGTCAAGGTGTTCCTGTGGT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AATGAGCCGGGTTTCCTCATCTGTAAGATGAGGGTAATAATTGTACCTCTCTCAATGATGAACAGATGCTaGGCTTGGGTTCGAGTGTAT +
Preference number: 4 (lower is better)
Translates to: NEPGFLICKMRVIIVPLSMMNRC*AWVRVY
Trigger: ATACACTCGAACCCAAGCTCAGCATCTGTTCATCAT...TGAGAGAGGTACAATTATTACCCTCATCTTACAGATGAGGAAACCCGGCTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCGTCCCAACATTGCTGTaGGCTCCATGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFVPTLL*APCPLP
Trigger: AGGAAGAGGACATGGAGCTCACAGCAATGTTGGGAC...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCTTTGTCTTTCATATTaGCCGAATAGAAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLLCLSY*PNRKNG
Trigger: GCCATTCTTTCTATTCGGTCAATATGAAAGACAAAG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGAAAACATAAAGCTATaGGATTTCACAATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSENIKL*DFTMGA
Trigger: GGCTCCCATTGTGAAATCTCATAGCTTTATGTTTTC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAAAACATAAAGCTATaGGATTTCACAATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKENIKL*DFTMGA
Trigger: GGCTCCCATTGTGAAATCTCATAGCTTTATGTTTTC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTTGCTTGAGGGGCATTaGCACACCTTGTGTCAATAC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMILLEGH*HTLCQY
Trigger: GTATTGACACAAGGTGTGTCAATGCCCCTCAAGCAA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCCTGTCCGCAATTGCTTaGGGGGCATTGACACACCTT +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFLSAIA*GALTHL
Trigger: AAGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAG...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGAGAATAAAGCAGGTATaGTTCAAGGAAAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWRIKQV*FKERGK
Trigger: TTTTCCCCTTTCCTTGAATCATACCTGCTTTATTCT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTAATTACATTCTCCTaGGCTTGCTCGACTAGACTT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLITFS*ACSTRL
Trigger: AAGTCTAGTCGAGCAAGCTCAGGAGAATGTAATTAA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTTAATTACATTCTCCTaGGCTTGCTCGACTAGACTT +
Preference number: 4 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLITFS*ACSTRL
Trigger: AAGTCTAGTCGAGCAAGCTCAGGAGAATGTAATTAA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCCCTTGCCTGAGCCCCTaGACCTTCTTAAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFPCLSP*TFLKQP
Trigger: TGGCTGTTTTAAGAAGGTTCAGGGGCTCAGGCAAGG...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTGAGCCTTCAGAAGTCTaGCAGATGGAAGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVEPSEV*QMEERL
Trigger: CAGCCTTTCTTCCATCTGTCAGACTTCTGAAGGCTC...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACGCACAACACACGACATaGACGGTGAGAACAGAACAT +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYAQHTT*TVRTEH
Trigger: ATGTTCTGTTCTCACCGTTCATGTCGTGTGTTGTGC...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTGGTATGCTTGCAACTaGTGGCTTTGGGTTGATACC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIWYACN*WLWVDT
Trigger: GGTATCAACCCAAAGCCATCAGTTGCAAGCATACCA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAAAAAGCGAGACTAAATaGGATGTCCTGATAGTGAGT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKKSETK*DVLIVS
Trigger: ACTCACTATCAGGACATCTCATTTAGTCTCGCTTTT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTTCCAATCCAGATTCTaGTCTAGAAGATTATGCCTC +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHFQSRF*SRRLCL
Trigger: GAGGCATAATCTTCTAGATCAGAATCTGGATTGGAA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCCCAGTGCATGTTTGCTaGGAGGGAAATAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFPVHVC*EGNSQR
Trigger: ACGCTGGCTATTTCCCTCTCAGCAAACATGCACTGG...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGAGACTTCAGCATTGTaGTTGTGCTTGATACTTAAA +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLETSAL*LCLILK
Trigger: TTTAAGTATCAAGCACAATCACAATGCTGAAGTCTC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGAAATCCTCTCTTAGATaGCCTGTAGAAACAGTCACG +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMKSSLR*PVETVT
Trigger: CGTGACTGTTTCTACAGGTCATCTAAGAGAGGATTT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTGGTCCTGATTGGCACTaGCACTCTTTACAAAGCCTA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSGPDWH*HSLQSL
Trigger: TAGGCTTTGTAAAGAGTGTCAGTGCCAATCAGGACC...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTCATTGGGTTGTAGGGTaGATGGAAGGTTTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSHWVVG*MEGLLS
Trigger: ACTCAACAAACCTTCCATTCACCCTACAACCCAATG...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGACGCTCCAGTTGTCATTaGTGCTTTGATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGRSSCH*CFDEPF
Trigger: AAAGGGCTCATCAAAGCAGCAATGACAACTGGAGCG...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR GCA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATCGCTCCAGTTGTCATTaGTGCTTTGATGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHRSSCH*CFDEPF
Trigger: AAAGGGCTCATCAAAGCAGCAATGACAACTGGAGCG...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp AATGAGCCGGGTTTCCTCATCTGTAAGATGAGGGTAATAATTGTACCTCTCTCAGGGCAATACCTATGGTaGATATCTTTCCTCGAGACT +
Preference number: 4 (lower is better)
Translates to: NEPGFLICKMRVIIVPLSGQYLW*ISFLET
Trigger: AGTCTCGAGGAAAGATATGCACCATAGGTATTGCCC...TGAGAGAGGTACAATTATTACCCTCATCTTACAGATGAGGAAACCCGGCTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGATGGTGAGAAAACGGTaGATGCTTACTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMMVRKR*MLTPFS
Trigger: AGAGAATGGAGTAAGCATGCACCGTTTTCTCACCAT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAAGCTTTGGGTTCTTTTaGTACAGAGTGGGAACTAGT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSFGFF*YRVGTS
Trigger: ACTAGTTCCCACTCTGTAGCAAAAGAACCCAAAGCT...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTAGGTCTGTCTGTGGGTaGAAGTGTTGCATAGGCACT +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVRSVCG*KCCIGT
Trigger: AGTGCCTATGCAACACTTGCACCCACAGACAGACCT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTAATACTTGTGTATTCTaGTGTTTTTACAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSNTCVF*CFYRHP
Trigger: GGGGTGCCTGTAAAAACAGCAGAATACACAAGTATT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCAATACTTGTGTATTCTaGTGTTTTTACAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSNTCVF*CFYRHP
Trigger: GGGGTGCCTGTAAAAACAGCAGAATACACAAGTATT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGAATACTTGTGTATTCTaGTGTTTTTACAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRNTCVF*CFYRHP
Trigger: GGGGTGCCTGTAAAAACAGCAGAATACACAAGTATT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCCTTGCTGTGTTCCGCTaGCTGTCGAGTTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFLAVFR*LSSLSL
Trigger: CAGTGACAAACTCGACAGGCAGCGGAACACAGCAAG...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGAGGTTTAGTTGTGCTTaGTTTCAAAGCTTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWRFSCA*FQSFGK
Trigger: CTTTCCAAAGCTTTGAAAGCAAGCACAACTAAACCT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTTAGGTAGAACTGCTTaGTGCCGGCTTATACTGAAT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMLGRTA*CRLILN
Trigger: ATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTCTCTCTCTGCAGCCGTaGTCATGCATACCAAATGTG +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVLSLQP*SCIPNV
Trigger: CACATTTGGTATGCATGAGCACGGCTGCAGAGAGAG...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTAGTGCCTATTACAACTaGATTAACTACGAGCAAACA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERASAYYN*INYEQT
Trigger: TGTTTGCTCGTAGTTAATGCAGTTGTAATAGGCACT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAAATGCATAAAGCAGTaGATGCATTTTGTTGACACA +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQKCIKQ*MHFVDT
Trigger: TGTGTCAACAAAATGCATGCACTGCTTTATGCATTT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTACATTCACAGCGATCTaGGCACTTCTGCACTATCAC +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSTFTAI*ALLHYH
Trigger: GTGATAGTGCAGAAGTGCGCAGATCGCTGTGAATGT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTGTTTCAGCTTACTGTaGGAGGGTCAACAAGGTATA +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMCFSLL*EGQQGI
Trigger: TATACCTTGTTGACCCTCGCACAGTAAGCTGAAACA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAATGAGTACAGTATACTaGACGTACTGTTTTTACACA +
Preference number: 4 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQMSTVY*TYCFYT
Trigger: TGTGTAAAAACAGTACGTGCAGTATACTGTACTCAT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTGACCACTTTTCAGACTaGATGTCATTTCGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLDHFSD*MSFRER
Trigger: CCTCTCCCGAAATGACATCCAGTCTGAAAAGTGGTC...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATGACCACTTTTCAGACTaGATGTCATTTCGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHDHFSD*MSFRER
Trigger: CCTCTCCCGAAATGACATCCAGTCTGAAAAGTGGTC...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTATGGCTTTGTTGGAATaGCCACCTCCTTGGAACTCA +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIMALLE*PPPWNS
Trigger: TGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCAT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTCCAACTGCCATTCCTTaGTCATCAGGTGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSPTAIP*SSGVRG
Trigger: TCCTCTTACACCTGATGACCAAGGAATGGCAGTTGG...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTGACTTGCTTGAGTTTTaGCTGGAGTTCAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: DQAEAFSRRGPILSLQLIDLLEF*LEFKVL
Trigger: CAGAACTTTGAACTCCAGCCAAAACTCAAGCAAGTC...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGAAGGGGGCAATACCTATaGTGCATATCTTTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGRGQYL*CISFLE
Trigger: CTCGAGGAAAGATATGCACCATAGGTATTGCCCCCT...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTAGGGGGCAATACCTATaGTGCATATCTTTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIRGQYL*CISFLE
Trigger: CTCGAGGAAAGATATGCACCATAGGTATTGCCCCCT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTAGGGGGCAATACCTATaGTGCATATCTTTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSRGQYL*CISFLE
Trigger: CTCGAGGAAAGATATGCACCATAGGTATTGCCCCCT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAATCATGGGATTGGACATaGTCTGGTATGGCCGGACAA +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQSWDWT*SGMAGQ
Trigger: TTGTCCGGCCATACCAGACCATGTCCAATCCCATGA...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCTCCATATTTTCCAGTaGTCCCGTTGTCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLLHIFQ*SRCQPE
Trigger: TTCTGGCTGACAACGGGACCACTGGAAAATATGGAG...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACAAAGGGAAGGGGAAGTaGTTGATCTCAGGATCATCC +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYKGKGK*LISGSS
Trigger: GGATGATCCTGAGATCAACCACTTCCCCTTCCCTTT...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATACCAGAACTTCACGATaGGTGCATTGTAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDTRTSR*VHCRIH
Trigger: ATGAATTCTACAATGCACCCATCGTGAAGTTCTGGT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGACCAGAACTTCACGATaGGTGCATTGTAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRTRTSR*VHCRIH
Trigger: ATGAATTCTACAATGCACCCATCGTGAAGTTCTGGT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAAATATCATGGTCATGTaGCTGAAGATGATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKNIMVM*LKMISG
Trigger: ACCACTGATCATCTTCAGCCACATGACCATGATATT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCTGGAATCAGGAACAATaGCCAAGGTGTTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFWNQEQ*PRCWQG
Trigger: CCCCTGCCAACACCTTGGCCATTGTTCCTGATTCCA...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTGGTAGCGGCTACTTTTaGAACGCTCAATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVGSGYF*NAQWCG
Trigger: ACCACACCATTGAGCGTTCCAAAAGTAGCCGCTACC...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTAACTGATTCTGGGTACTaGCAAAAGCAGTCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVTDSGY*QKQSPE
Trigger: CTCCGGGGACTGCTTTTGCCAGTACCCAGAATCAGT...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTTCTTGAGCCTTCTGTaGCGGATATTAAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSFLSLL*RILRRF
Trigger: AAACCTTCTTAATATCCGCCACAGAAGGCTCAAGAA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTTTAGGAGAGGAAGCTACTaGAGCCAATGGAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: THFALILDSSRISYVSPFRRGSY*SQWSLR
Trigger: CCTCAGGCTCCATTGGCTCCAGTAGCTTCCTCTCCT...AAACGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp AAAGCACCTCAGTGGTTCATGACTTCCAAGCAAAATGAAATCCGAAACCTAAGAGGCAGTCAGAGCGTTTaGATGAGCTCCAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KAPQWFMTSKQNEIRNLRGSQSV*MSSKRK
Trigger: TTTCCTTTTGGAGCTCATCCAAACGCTCTGACTGCC...TCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTGGTCATGTGATGAGTaGTGTGAAAAATTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRWSCDE*CEKLAV
Trigger: AACTGCCAATTTTTCACACCACTCATCACATGACCA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGAAGGAAATGGCTCATaGAAGTTACACAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSEGNGS*KLHSLC
Trigger: ACACAAACTGTGTAACTTCCATGAGCCATTTCCTTC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAATGCTACAACTACGCTaGGTTAAACATGGGTTACAT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKMLQLR*VKHGLH
Trigger: ATGTAACCCATGTTTAACCCAGCGTAGTTGTAGCAT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACTGCACTATCACAAATaGACTTTTCGCTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGLHYHK*TFRSHL
Trigger: GAGATGAGAGCGAAAAGTCCATTTGTGATAGTGCAG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCTCTTGTCATATCATTaGATCACACATTCACAGCGA +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSLLSYH*ITHSQR
Trigger: TCGCTGTGAATGTGTGATCCAATGATATGACAAGAG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGATTCTTATTGCCATCTaGATTACCTGGTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWILIAI*ITWSPK
Trigger: TTTTGGTGACCAGGTAATCCAGATGGCAATAAGAAT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTCTTTACAAAGCCTATaGACTTCTAGCCATACACAT +
Preference number: 4 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLSLQSL*TSSHTH
Trigger: ATGTGTATGGCTAGAAGTCCATAGGCTTTGTAAAGA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCAGTCTATGTGCAGATaGCTGGTTTTAATGATGTGT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDQSMCR*LVLMMC
Trigger: ACACATCATTAAAACCAGCCATCTGCACATAGACTG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCTTCATACCATGCTATaGTACTCTTCTTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLHTML*YSSSES
Trigger: AGATTCAGAAGAAGAGTACCATAGCATGGTATGAAG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AAAGCACCTCAGTGGTTCATGACTTCCAAGCAAAATGAAATCCGAAACCTAAGACTTTGGTGCTGGGTATaGTGTGGACACATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: KAPQWFMTSKQNEIRNLRLWCWV*CGHILF
Trigger: AAAGAGAATGTGTCCACATCATACCCAGCACCAAAG...TCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp AAAGCACCTCAGTGGTTCATGACTTCCAAGCAAAATGAAATCCGAAACCTAAGATCATTTTTCTCATTCTaGAGCACGGAGATACTGGGG +
Preference number: 4 (lower is better)
Translates to: KAPQWFMTSKQNEIRNLRSFFSF*STEILG
Trigger: CCCCAGTATCTCCGTGCTTCAGAATGAGAAAAATGA...TCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTGTTGAGTGTGTTTGCTaGTGGACCACTTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLVECVC*WTTFQT
Trigger: AGTCTGAAAAGTGGTCCATCAGCAAACACACTCAAC...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR TCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGTTGAGTGTGTTTGCTaGTGGACCACTTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIVECVC*WTTFQT
Trigger: AGTCTGAAAAGTGGTCCATCAGCAAACACACTCAAC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACGTTGAGTGTGTTTGCTaGTGGACCACTTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYVECVC*WTTFQT
Trigger: AGTCTGAAAAGTGGTCCATCAGCAAACACACTCAAC...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTTTCGAGACTTAGAGGCATaGTCCTTCAAGGCATCGCCA +
Preference number: 4 (lower is better)
Translates to: THFALILDSSRISYVSPFRDLEA*SFKASP
Trigger: TGGCGATGCCTTGAAGGATCATGCCTCTAAGTCTCG...AAACGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAACAACATCTCTTCCAATaGGGTCCTCCTGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQQHLFQ*GPPGFP
Trigger: TGGAAAACCAGGAGGACCTCATTGGAAGAGATGTTG...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATACCACAGGAACACCTTaGCCGATTCTTGTGTTTATC +
Preference number: 4 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHTTGTP*PILVFI
Trigger: GATAAACACAAGAATCGGTCAAGGTGTTCCTGTGGT...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGCAGTCCGCCTTCTTCTaGGTATTTATGCCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ETHFALILDSSRISYVSPQSAFF*VFMPKG
Trigger: GCCTTTGGGCATAAATACTCAGAAGAAGGCGGACTG...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTATCTGAGCCTGAGCACTaGTTCTGGGTACTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVSEPEH*FWVLAK
Trigger: TTTTGCCAGTACCCAGAATCAGTGCTCAGGCTCAGA...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAAGAATAAAGCAGGTATaGTTCAAGGAAAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPRIKQV*FKERGK
Trigger: TTTTCCCCTTTCCTTGAATCATACCTGCTTTATTCT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTTCATCAGTCACCAGTaGTGGAGCCAATGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSFISHQ*WSQCEK
Trigger: CTTTTCACATTGGCTCCATCACTGGTGACTGATGAA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATTAATTACATTCTCCTaGGCTTGCTCGACTAGACTT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGLITFS*ACSTRL
Trigger: AAGTCTAGTCGAGCAAGCTCAGGAGAATGTAATTAA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTATTCAAGAAAATGACTaGAAATGTGGAGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: DQAEAFSRRGPILSLQLIIQEND*KCGDSW
Trigger: CCAGCTGTCTCCACATTTTCAGTCATTTTCTTGAAT...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTACACGACATGAACGGTaGGAACAGAACATCCCACAT +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVTRHER*EQNIPH
Trigger: ATGTGGGATGTTCTGTTCTCACCGTTCATGTCGTGT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTGCAGAAGGCGAGCAGTaGGTCATTTTGACAACTCTA +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVAEGEQ*VILTTL
Trigger: TAGAGTTGTCAAAATGACTCACTGCTCGCCTTCTGC...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGAGACTTCAGCATTGTaGTTGTGCTTGATACTTAAA +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSETSAL*LCLILK
Trigger: TTTAAGTATCAAGCACAATCACAATGCTGAAGTCTC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTAGCCTTTCTTTTGGTTaGCTCCAATCTGAGAGACAG +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSSLSFG*LQSERQ
Trigger: CTGTCTCTCAGATTGGAGTCAACCAAAAGAAAGGCT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATATTATGAAATGGCTATaGGTACAGTATACTGCACGT +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDIMKWL*VQYTAR
Trigger: ACGTGCAGTATACTGTACTCATAGCCATTTCATAAT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAATCCAGTTGTCATTGCTaGTTTGATGAGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQSSCHC*FDEPFP
Trigger: GGGAAAGGGCTCATCAAAGCAGCAATGACAACTGGA...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTCTGGAGTGAAATATaGTTTTCCAGTTGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRFWSEI*FSSCLR
Trigger: TCGAAGACAACTGGAAAAGCATATTTCACTCCAGAA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTTCTGGAGTGAAATATaGTTTTCCAGTTGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: FTAICALLHYHKWTFRSHFWSEI*FSSCLR
Trigger: TCGAAGACAACTGGAAAAGCATATTTCACTCCAGAA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTATCCTTCCACTATGAGTaGCACCACAGGAACACCTTG +
Preference number: 4 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVSFHYE*HHRNTL
Trigger: CAAGGTGTTCCTGTGGTGGCACTCATAGTGGAAGGA...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATTCTTCTGAGTATTTATaGCCAAAGGCCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHSSEYL*PKARMS
Trigger: GGACATCCTGGCCTTTGGGCATAAATACTCAGAAGA...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTCTTCTGAGTATTTATaGCCAAAGGCCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMISSEYL*PKARMS
Trigger: GGACATCCTGGCCTTTGGGCATAAATACTCAGAAGA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAACTTCACGATGGGTaGATTGTAGAATTCATAGAT +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKELHDG*IVEFID
Trigger: ATCTATGAATTCTACAATGCACCCATCGTGAAGTTC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGAACTTCACGATGGGTaGATTGTAGAATTCATAGAT +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSELHDG*IVEFID
Trigger: ATCTATGAATTCTACAATGCACCCATCGTGAAGTTC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGAACTTCACGATGGGTaGATTGTAGAATTCATAGAT +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPELHDG*IVEFID
Trigger: ATCTATGAATTCTACAATGCACCCATCGTGAAGTTC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGCTTTCTGCTGTGACTaGGGATACACATTCATCTCT +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIAFCCD*GYTFIS
Trigger: AGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTAACAGCTGGCCACCCATaGGGAATTACCTACCAATTC +
Preference number: 4 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVTAGHP*GITYQF
Trigger: GAATTGGTAGGTAATTCCGCATGGGTGGCCAGCTGT...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTATGCTAAAACTCTGCTaGACACACCTTATTAACTCG +
Preference number: 4 (lower is better)
Translates to: DQAEAFSRRGPILSLQLIMLKLC*THLINS
Trigger: CGAGTTAATAAGGTGTGTGCAGCAGAGTTTTAGCAT...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTATTCTCAGACCCAGTaGATGTTTGCTGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSYSQTQ*MFAERE
Trigger: TTCCCTCTCAGCAAACATGCACTGGGTCTGAGAATA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGATTAATACAACCACATaGTACAACTACGCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: GENFRAGFLSLLWRILRRINTTT*YNYAGL
Trigger: TAACCCAGCGTAGTTGTAGCATGTGGTTGTATTAAT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGTCTTTTGCATAACATaGCAGTTCATCTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAVFCIT*QFIFHK
Trigger: TTTGTGAAAGATGAACTGGCATGTTATGCAAAAGAC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTGTCATATAGTCTTTTaGATAACATGCCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWCHIVF*ITCQFI
Trigger: GATGAACTGGCATGTTATGCAAAAGACTATATGACA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTAAATGCATAAAGCAGTaGATGCATTTTGTTGACACA +
Preference number: 4 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAKCIKQ*MHFVDT
Trigger: TGTGTCAACAAAATGCATGCACTGCTTTATGCATTT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGAATACTCGCACATACATaGCTTTGTTGGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGILAHT*LCWNGH
Trigger: GTGGCCATTCCAACAAAGCCATGTATGTGCGAGTAT...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAACCAACTGCCATTCCTTaGTCATCAGGTGTAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQPTAIP*SSGVRG
Trigger: TCCTCTTACACCTGATGACCAAGGAATGGCAGTTGG...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTTGCTTGAGTTTTGGCTaGAGTTCAAAGTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLCLSFG*SSKFCR
Trigger: CCTGCAGAACTTTGAACTCCAGCCAAAACTCAAGCA...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp AGTAAGCAGAGAACAAAATCACATGATTTTGTTCACCCTAGCAGGGTCTCTGATTGCTTGAGTTTTGGCTaGAGTTCAAAGTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SKQRTKSHDFVHPSRVSDCLSFG*SSKFCR
Trigger: CCTGCAGAACTTTGAACTCCAGCCAAAACTCAAGCA...ATCAGAGACCCTGCTAGGGTGAACAAAATCATGTGATTTTGTTCTCTGCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGCCAATGAGGTCCTCCTaGTTTTCCACAATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLPMRSS*FSTIPQ
Trigger: CTGGGGAATTGTGGAAAACCAGGAGGACCTCATTGG...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGGGATTGGACATGGTCTaGTATGGCCGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLGLDMV*YGRTTS
Trigger: AGATGTTGTCCGGCCATACCAGACCATGTCCAATCC...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp ACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTTTGCTTGCTCATGGGATTaGACATGGTCTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: THFALILDSSRISYVSPFACSWD*TWSGMA
Trigger: GGCCATACCAGACCATGTCCAATCCCATGAGCAAGC...AAACGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTACATCCCTGACCAAGTaGTACAATGTATTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSTSLTK*YNVFEG
Trigger: GCCCTCAAATACATTGTACCACTTGGTCAGGGATGT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATATGAGATTTCACAATaGGAGCCTCTTCTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: EGCGTLGRTACCRLILNKYEISQ*EPLLEE
Trigger: TTCTTCTAGAAGAGGCTCCCATTGTGAAATCTCATA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCATATGAGATTTCACAATaGGAGCCTCTTCTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPYEISQ*EPLLEE
Trigger: TTCTTCTAGAAGAGGCTCCCATTGTGAAATCTCATA...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTTCTTGAGCCTTCTGTaGCGGATATTAAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMFLSLL*RILRRF
Trigger: AAACCTTCTTAATATCCGCCACAGAAGGCTCAAGAA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTTTTAGGGTTCTTCCATaGGGCCTGGAAAGTTACCTA +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLFRVLP*GLESYL
Trigger: TAGGTAACTTTCCAGGCCCCATGGAAGAACCCTAAA...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGAAATGTGGAGACAGCTaGCCACCCATGCGGAATTAC +
Preference number: 4 (lower is better)
Translates to: ETHFALILDSSRISYVSPKCGDS*PPMRNY
Trigger: GTAATTCCGCATGGGTGGCCAGCTGTCTCCACATTT...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp ACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTTTAGCTACTGGAGCCAATaGAGCCTGAGGAGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: THFALILDSSRISYVSPFSYWSQ*SLRRAV
Trigger: TACAGCTCTCCTCAGGCTCCATTGGCTCCAGTAGCT...AAACGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp AGTAAGCAGAGAACAAAATCACATGATTTTGTTCACCCTAGCAGGGTCTCTGATCAGAAAGCACCTCAGTaGTTCATGACTTCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SKQRTKSHDFVHPSRVSDQKAPQ*FMTSKQ
Trigger: TTGCTTGGAAGTCATGAACCACTGAGGTGCTTTCTG...ATCAGAGACCCTGCTAGGGTGAACAAAATCATGTGATTTTGTTCTCTGCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp AGTAAGCAGAGAACAAAATCACATGATTTTGTTCACCCTAGCAGGGTCTCTGATATCTTGCTCCCTGCTTaGCAGATAGCAAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SKQRTKSHDFVHPSRVSDILLPA*QIASSC
Trigger: ACAAGAACTTGCTATCTGCCAAGCAGGGAGCAAGAT...ATCAGAGACCCTGCTAGGGTGAACAAAATCATGTGATTTTGTTCTCTGCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGTAAATAAGGGAGTCTaGGTGTTTGTTAGCAATTCA +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDVNKGV*VFVSNS
Trigger: TGAATTGCTAACAAACACCCAGACTCCCTTATTTAC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGTAAATAAGGGAGTCTaGGTGTTTGTTAGCAATTCA +
Preference number: 4 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSVNKGV*VFVSNS
Trigger: TGAATTGCTAACAAACACCCAGACTCCCTTATTTAC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTCCCAGAATGAGGCCTTaGAGGTGTTTGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVPRMRP*RCLMSM
Trigger: CATTGACATCAAACACCTCCAAGGCCTCATTCTGGG...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACTCTTGTCATATCATTaGATCACACATTCACAGCGA +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGLLSYH*ITHSQR
Trigger: TCGCTGTGAATGTGTGATCCAATGATATGACAAGAG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGGGGGCCAGGATACAGTaGATCTTGAGTCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLGARIQ*ILSPSK
Trigger: TTTGCTTGGACTCAAGATCCACTGTATCCTGGCCCC...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396283.5
3UTR CAA 72 bp GTTTGTTTGGCTAGGACAGTGTTTGGAAAGCTGAATTaGAAGGTGTTTGTGGTGGGATGTGTATTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: VCLARTVFGKLN*KVFVVGCVFCH
Trigger: ATGACAGAATACACATCCCACCACAAACACCTTCAAATTCAGCTTTCCAAACACTGTCCTAGCCAAACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAATCATTTTTCTCATTCTaGAGCACGGAGATACTGGGG +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQSFFSF*STEILG
Trigger: CCCCAGTATCTCCGTGCTTCAGAATGAGAAAAATGA...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAATCCCAAAGACTTGCTTaGGTTTTGGCTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQSQRLA*VLAGVQ
Trigger: TTGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGA...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTACAACATCTCTTCCAATaGGGTCCTCCTGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVQHLFQ*GPPGFP
Trigger: TGGAAAACCAGGAGGACCTCATTGGAAGAGATGTTG...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTCCTCTCATCATTAGATaGGTTGAACCGATCATCCTT +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSPLIIR*VEPIIL
Trigger: AAGGATGATCGGTTCAACTCATCTAATGATGAGAGG...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACTTTGTCTTTCATATTaGCCGAATAGAAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGLCLSY*PNRKNG
Trigger: GCCATTCTTTCTATTCGGTCAATATGAAAGACAAAG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTGAGGTGGGTGTAGTCTaGAGAAAAAGATCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVEVGVV*RKRSSV
Trigger: GACACTAGATCTTTTTCTTCAGACTACACCCACCTC...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGAAAACATAAAGCTATaGGATTTCACAATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIAENIKL*DFTMGA
Trigger: GGCTCCCATTGTGAAATCTCATAGCTTTATGTTTTC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTGATCAAATGCTTTCTTaGTCTGTGGCCCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVDQMLS*SVAQKS
Trigger: TGACTTCTGGGCCACAGATCAAGAAAGCATTTGATC...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCTTAATTACATTCTCCTaGGCTTGCTCGACTAGACTT +
Preference number: 4 (lower is better)
Translates to: TIKNLILLALNQRSQTIALITFS*ACSTRL
Trigger: AAGTCTAGTCGAGCAAGCTCAGGAGAATGTAATTAA...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTCTCTGAAATCACGATaGATGGAAACACTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSSLKSR*METLEL
Trigger: CAGCTCAAGTGTTTCCATTCATCGTGATTTCAGAGA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTCCTTGAGCTCTCTATaGCTTTATTTACGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSSLSSL*LYLRSS
Trigger: TGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTCCAGTTGTCATTGCTaGTTTGATGAGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: ETHFALILDSSRISYVSPSSCHC*FDEPFP
Trigger: GGGAAAGGGCTCATCAAAGCAGCAATGACAACTGGA...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAAGGTTTAGTTGTGCTTaGTTTCAAAGCTTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGRFSCA*FQSFGK
Trigger: CTTTCCAAAGCTTTGAAAGCAAGCACAACTAAACCT...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGGTAGAACTGCTTGCTaGCGGCTTATACTGAATAAA +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIGRTAC*RLILNK
Trigger: TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTGGTAGAACTGCTTGCTaGCGGCTTATACTGAATAAA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSGRTAC*RLILNK
Trigger: TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACC...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACGAAAGCTTAGGTCAATaGAGGCTGAGAGGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYESLGQ*RLRGKF
Trigger: AAACTTTCCTCTCAGCCTGCATTGACCTAAGCTTTC...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGATGTGTATTCTGTCATaGCTTACTTACAAACCCTAC +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMMCILS*LTYKPY
Trigger: GTAGGGTTTGTAAGTAAGGCATGACAGAATACACAT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATATGAGTACAGTATACTaGACGTACTGTTTTTACACA +
Preference number: 4 (lower is better)
Translates to: CGTLGRTACCRLILNKEDMSTVY*TYCFYT
Trigger: TGTGTAAAAACAGTACGTGCAGTATACTGTACTCAT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGGACCACTTTTCAGACTaGATGTCATTTCGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLDHFSD*MSFRER
Trigger: CCTCTCCCGAAATGACATCCAGTCTGAAAAGTGGTC...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTGACTTGCTTGAGTTTTaGCTGGAGTTCAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLDLLEF*LEFKVL
Trigger: CAGAACTTTGAACTCCAGCCAAAACTCAAGCAAGTC...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CCA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGAGGGGGCAATACCTATaGTGCATATCTTTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: ETHFALILDSSRISYVSPRGQYL*CISFLE
Trigger: CTCGAGGAAAGATATGCACCATAGGTATTGCCCCCT...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGCTCCATATTTTCCAGTaGTCCCGTTGTCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLLHIFQ*SRCQPE
Trigger: TTCTGGCTGACAACGGGACCACTGGAAAATATGGAG...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCGAGTTATCACCCTCCTaGGAGGATATTGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFELSPS*EDIAMV
Trigger: CACCATTGCAATATCCTCCCAGGAGGGTGATAACTC...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACCAATTACAGAAGTGTTaGCATGAGAAGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYQLQKC*HEKDVG
Trigger: TCCCACATCCTTCTCATGCCAACACTTCTGTAATTG...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTCAATTACAGAAGTGTTaGCATGAGAAGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSQLQKC*HEKDVG
Trigger: TCCCACATCCTTCTCATGCCAACACTTCTGTAATTG...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAAGGAATCCAAAGATTTaGGGTCAAGATTTCTTTATC +
Preference number: 4 (lower is better)
Translates to: RLILNKEDALHQSPVMEPRNPKI*GQDFFI
Trigger: GATAAAGAAATCTTGACCCCAAATCTTTGGATTCCT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCAGGAATCCAAAGATTTaGGGTCAAGATTTCTTTATC +
Preference number: 4 (lower is better)
Translates to: PEVTFELTPPKALLVLLSRNPKI*GQDFFI
Trigger: GATAAAGAAATCTTGACCCCAAATCTTTGGATTCCT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACAAAACTGTGCAAATTaGCTCCTCTCTTTAACAGAT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGQNCAN*LLSLTD
Trigger: ATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCTTTACAAAGCCTATaGACTTCTAGCCATACACAT +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSLQSL*TSSHTH
Trigger: ATGTGTATGGCTAGAAGTCCATAGGCTTTGTAAAGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCTTCATACCATGCTATaGTACTCTTCTTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMLHTML*YSSSES
Trigger: AGATTCAGAAGAAGAGTACCATAGCATGGTATGAAG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTGTTTATGCTCATGAATaGACACTTGCTTTGCATGGA +
Preference number: 4 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSVYAHE*TLALHG
Trigger: TCCATGCAAAGCAAGTGTCCATTCATGAGCATAAAC...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGGTTGAGTGTGTTTGCTaGTGGACCACTTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: ETHFALILDSSRISYVSPVECVC*WTTFQT
Trigger: AGTCTGAAAAGTGGTCCATCAGCAAACACACTCAAC...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTATCCCAAAGACTTGCTTaGGTTTTGGCTGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVSQRLA*VLAGVQ
Trigger: TTGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGA...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp AGTAAGCAGAGAACAAAATCACATGATTTTGTTCACCCTAGCAGGGTCTCTGATGACTTCCAAGCAAAATaGAATCCGAAACCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: SKQRTKSHDFVHPSRVSDDFQAK*NPKPKK
Trigger: CTTCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTC...ATCAGAGACCCTGCTAGGGTGAACAAAATCATGTGATTTTGTTCTCTGCTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGGGGCAATACCTATGGTaGATATCTTTCCTCGAGACT +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLGQYLW*ISFLET
Trigger: AGTCTCGAGGAAAGATATGCACCATAGGTATTGCCC...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTTCTCATCAGGACAGTTaGAAAGGTCATATGAGTTTA +
Preference number: 4 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSSHQDS*KGHMSL
Trigger: TAAACTCATATGACCTTTGCAACTGTCCTGATGAGA...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATGTCATATAGTCTTTTaGATAACATGCCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGCHIVF*ITCQFI
Trigger: GATGAACTGGCATGTTATGCAAAAGACTATATGACA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTTGTTTCAGCTTACTGTaGGAGGGTCAACAAGGTATA +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVCFSLL*EGQQGI
Trigger: TATACCTTGTTGACCCTCGCACAGTAAGCTGAAACA...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCGCCTCTCAGTCTATGTaGAGATGGCTGGTTTTAATG +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFASQSM*RWLVLM
Trigger: CATTAAAACCAGCCATCTGCACATAGACTGAGAGGC...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTAATACTCGCACATACATaGCTTTGTTGGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVILAHT*LCWNGH
Trigger: GTGGCCATTCCAACAAAGCCATGTATGTGCGAGTAT...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGACTTGCTTGAGTTTTaGCTGGAGTTCAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQDLLEF*LEFKVL
Trigger: CAGAACTTTGAACTCCAGCCAAAACTCAAGCAAGTC...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTACCAGAACTTCACGATaGGTGCATTGTAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSTRTSR*VHCRIH
Trigger: ATGAATTCTACAATGCACCCATCGTGAAGTTCTGGT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGTCTGTAACACTAGCTaGTTTAAAGTTGCGTGTCTA +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIVCNTS*FKVACL
Trigger: TAGACACGCAACTTTAAACCAGCTAGTGTTACAGAC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACAACTACGAGCAAACATaGTTCCTTTCCCTCATAATC +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYNYEQT*FLSLII
Trigger: GATTATGAGGGAAAGGAACCATGTTTGCTCGTAGTT...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 72 bp GAGCTCTCTATGACTTTATTTACGGTCCTCAGTAACTaGCTGCTCATAAACTGCTTAATTCACAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: ELSMTLFTVLSN*LLINCLIHKDR
Trigger: CCTGTCTTTGTGAATTAAGCAGTTTATGAGCAGCAAGTTACTGAGGACCGTAAATAAAGTCATAGAGAGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACCTTTGTCTTTCATATTaGCCGAATAGAAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYLCLSY*PNRKNG
Trigger: GCCATTCTTTCTATTCGGTCAATATGAAAGACAAAG...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTAGTCATTAAAGCTATTTaGCAGAAAGCACCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVVIKAI*QKAPQW
Trigger: CCACTGAGGTGCTTTCTGTCAAATAGCTTTAATGAC...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCTCTCTGAAATCACGATaGATGGAAACACTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFSLKSR*METLEL
Trigger: CAGCTCAAGTGTTTCCATTCATCGTGATTTCAGAGA...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTATGGTACTCTTCTTCTaGATCTCTCTCACAAAGACT +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVMVLFF*ISLTKT
Trigger: AGTCTTTGTGAGAGAGATTCAGAAGAAGAGTACCAT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACATTATGAAATGGCTATaGGTACAGTATACTGCACGT +
Preference number: 4 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYIMKWL*VQYTAR
Trigger: ACGTGCAGTATACTGTACTCATAGCCATTTCATAAT...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTTCTGGAGTGAAATATaGTTTTCCAGTTGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIFWSEI*FSSCLR
Trigger: TCGAAGACAACTGGAAAAGCATATTTCACTCCAGAA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGATTCTGGAGTGAAATATaGTTTTCCAGTTGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGFWSEI*FSSCLR
Trigger: TCGAAGACAACTGGAAAAGCATATTTCACTCCAGAA...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR GCA 90 bp AAAGCACCTCAGTGGTTCATGACTTCCAAGCAAAATGAAATCCGAAACCTAAGATTCTGGAGTGAAATATaGTTTTCCAGTTGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: KAPQWFMTSKQNEIRNLRFWSEI*FSSCLR
Trigger: TCGAAGACAACTGGAAAAGCATATTTCACTCCAGAA...TCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp ACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTTTAAAGATCTTGCTCCCTaGTTGGCAGATAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: THFALILDSSRISYVSPFKDLAP*LADSKF
Trigger: GAACTTGCTATCTGCCAAGCAGGGAGCAAGATCTTT...AAACGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR GCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTTGCTGCTCATAAACTaGTTAATTCACAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSLLLIN*LIHKDR
Trigger: CCTGTCTTTGTGAATTAAGCAGTTTATGAGCAGCAA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTATTAATACAACCACATaGTACAACTACGCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIINTTT*YNYAGL
Trigger: TAACCCAGCGTAGTTGTAGCATGTGGTTGTATTAAT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTAATATCATGGTCATGTaGCTGAAGATGATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVNIMVM*LKMISG
Trigger: ACCACTGATCATCTTCAGCCACATGACCATGATATT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGCCAACTGAGTCTAACTaGCAACTACCCCAAAATGAA +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLPTESN*QLPQNE
Trigger: TTCATTTTGGGGTAGTTGCCAGTTAGACTCAGTTGG...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTATTCTTATTGCCATCTaGATTACCTGGTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSILIAI*ITWSPK
Trigger: TTTTGGTGACCAGGTAATCCAGATGGCAATAAGAAT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 72 bp TATTCTGTCATGCCTTACTTACAAACCCTACTTCTGTaGACTTTCACCAGTCCAGTTCACACATTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: YSVMPYLQTLLL*TFTSPVHTFVF
Trigger: AAACACAAATGTGTGAACTGGACTGGTGAAAGTCAACAGAAGTAGGGTTTGTAAGTAAGGCATGACAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR TCA 90 bp ACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTTTCATTTACTAATCAAATaGGCCGGGTTTCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: THFALILDSSRISYVSPFHLLIK*AGFPHL
Trigger: CAGATGAGGAAACCCGGCTCATTTGATTAGTAAATG...AAACGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR TCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAATGCAGAATAAAATTTaGGAATCATGGTCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQMQNKI*ESWSRP
Trigger: AGGCCTAGACCATGATTCTCAAATTTTATTCTGCAT...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGAAATGCAAATTACCTaGCCTCAACCAGATTTATTG +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQEMQIT*PQPDLL
Trigger: CAATAAATCTGGTTGAGGTCAGGTAATTTGCATTTC...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAACAGTAGTGCAGACTTaGGTTAATCTTGAAATCCTA +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQTVVQT*VNLEIL
Trigger: TAGGATTTCAAGATTAACTCAAGTCTGCACTACTGT...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGTTGTCTCCAAGACACTaGATCATGGTTCTATGGATT +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLLSPRH*IMVLWI
Trigger: AATCCATAGAACCATGATTCAGTGTCTTGGAGACAA...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCTTCTTGAGCCTTCTGTaGCGGATATTAAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFFLSLL*RILRRF
Trigger: AAACCTTCTTAATATCCGCCACAGAAGGCTCAAGAA...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CCA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAACAAGACACTGAATCATaGTTCTATGGATTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQQDTES*FYGFRG
Trigger: TCCTCTAAATCCATAGAACCATGATTCAGTGTCTTG...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR TCA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGCTCAACCAGATTTATTaGATTAGAAAATCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLLNQIY*IRKSGG
Trigger: ACCCCCAGATTTTCTAATTCAATAAATCTGGTTGAG...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR GCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCGAACTTCACGATGGGTaGATTGTAGAATTCATAGAT +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFELHDG*IVEFID
Trigger: ATCTATGAATTCTACAATGCACCCATCGTGAAGTTC...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR GCA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCAGTGCCTATTACAACTaGATTAACTACGAGCAAACA +
Preference number: 4 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFSAYYN*INYEQT
Trigger: TGTTTGCTCGTAGTTAATGCAGTTGTAATAGGCACT...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
3UTR CAA 72 bp ATGAGGGTAATAATTGTACCTCTCTCATCAGGACAGTaGCAAAGGTCATATGAGTTTATATGCATAAAGATC +
Preference number: 4 (lower is better)
Translates to: MRVIIVPLSSGQ*QRSYEFICIKI
Trigger: GATCTTTATGCATATAAACTCATATGACCTTTGCAACTGTCCTGATGAGAGAGGTACAATTATTACCCTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS GCA 90 bp TCCACGACTCGGCAAACCTGCCCCGGCTGGCGCTCCGGCTGCGTCTaGGGCTCTCCGCGTTGTCCTCGCGGTCGGAGCAGCCCCGCTCCA +
Preference number: 5 (lower is better)
Translates to: STTRQTCPGWRSGCV*GSPRCPRGRSSPAP
Trigger: TGGAGCGGGGCTGCTCCGACCGCGAGGACAACGCGGAGAGCCGCAGACGCAGCCGGAGCGCCAGCCGGGGCAGGTTTGCCGAGTCGTGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS GCA 90 bp ACCTTTTCCACGACTCGGCAAACCTGCCCCGGCTGGCGCTCCGGCTaGGTCTGCGGCTCTCCGCGTTGTCCTCGCGGTCGGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: TFSTTRQTCPGWRSG*VCGSPRCPRGRSSP
Trigger: GGGGCTGCTCCGACCGCGAGGACAACGCGGAGAGCCGCAGACGCAGCCGGAGCGCCAGCCGGGGCAGGTTTGCCGAGTCGTGGAAAAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS CCA 90 bp AGGCGGCGTCCGTGCAGTCTGACGAGGTCCTCGAGCGGATTTTGTTaGACTCGGCCCGCTCCAGACCTGTCAGGCGCTCCAGGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: RRRPCSLTRSSSGFC*TRPAPDLSGAPGPW
Trigger: CCACGGCCCTGGAGCGCCTGACAGGTCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGAGGACCTCGTCAGACTGCACGGACGCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS TCA 90 bp AGCAGCCCCGCTCCATTTCCGCCGCATCCCTCCACTTCTTCCCCATaGGAAGTTCGCCTCCCTCGGCCGGGAAACAGCCCAGCGCCGAGC +
Preference number: 5 (lower is better)
Translates to: SSPAPFPPHPSTSSP*EVRLPRPGNSPAPS
Trigger: GCTCGGCGCTGGGCTGTTTCCCGGCCGAGGGAGGCGAACTTCTCATGGGGAAGAAGTGGAGGGATGCGGCGGAAATGGAGCGGGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS GCA 90 bp AGGCGCTCCAGGGCCGTGGCCATGCGCCCGATAAGGTCTTCCAGCTaGGCCAGCCGGATGTCCACGGTCTGGAGTGAAGCCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: RRSRAVAMRPIRSSS*ASRMSTVWSEAFME
Trigger: CTCCATGAAGGCTTCACTCCAGACCGTGGACATCCGGCTGGCGCAGCTGGAAGACCTTATCGGGCGCATGGCCACGGCCCTGGAGCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 90 bp GCTTGGAACTTAACCTTTTCCACGACTCGGCAAACCTGCCCCGGCTaGCGCTCCGGCTGCGTCTGCGGCTCTCCGCGTTGTCCTCGCGGT +
Preference number: 5 (lower is better)
Translates to: AWNLTFSTTRQTCPG*RSGCVCGSPRCPRG
Trigger: ACCGCGAGGACAACGCGGAGAGCCGCAGACGCAGCCGGAGCGCCAGCCGGGGCAGGTTTGCCGAGTCGTGGAAAAGGTTAAGTTCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS GCA 90 bp TGGACCCCTGCTTGGAACTTAACCTTTTCCACGACTCGGCAAACCTaGCCCGGCTGGCGCTCCGGCTGCGTCTGCGGCTCTCCGCGTTGT +
Preference number: 5 (lower is better)
Translates to: WTPAWNLTFSTTRQT*PGWRSGCVCGSPRC
Trigger: ACAACGCGGAGAGCCGCAGACGCAGCCGGAGCGCCAGCCGGGGCAGGTTTGCCGAGTCGTGGAAAAGGTTAAGTTCCAAGCAGGGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS GCA 90 bp TCCTCATGGACAGGCTGTCCCCTCGGCCCTCCGGCTTGGAGGACTTaGTTCTCTGGAAGGGATTTCGCAGGCTTGCTGTGTTCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: SSWTGCPLGPPAWRT*FSGRDFAGLLCSAA
Trigger: GGCAGCGGAACACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGTCCATGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp GACAGGCTGTCCCCTCGGCCCTCCGGCTTGGAGGACTTGCTTCTCTaGAAGGGATTTCGCAGGCTTGCTGTGTTCCGCTGCCTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: DRLSPRPSGLEDLLL*KGFRRLAVFRCLSS
Trigger: ACTCGACAGGCAGCGGAACACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS TCA 90 bp GTTGAAGCTGCTCTGACGGACAATGTAGGCGGCGTCCGTGCAGTCTaGCGAGGTCCTCGAGCGGATTTTGTTGGACTCGGCCCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: VEAALTDNVGGVRAV*RGPRADFVGLGPLQ
Trigger: CTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGAGGACCTCGTCAGACTGCACGGACGCCGCCTACATTGTCCGTCAGAGCAGCTTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS GCA 90 bp CGAAGAGGTTGTGGTAGAGGGTCCGGAAGCGCTTGCGCGTGTAGTTaGAGCGATAAGCCCCGCCCATCAGGTACTCGATCACCAGGCCGA +
Preference number: 5 (lower is better)
Translates to: RRGCGRGSGSACACS*SDKPRPSGTRSPGR
Trigger: TCGGCCTGGTGATCGAGTACCTGATGGGCGGGGCTTATCGCTGCAACTACACGCGCAAGCGCTTCCGGACCCTCTACCACAACCTCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS TCA 90 bp GGTACCTGGATCCGTGCCTCTCCCCTCCTTTGTACTCTAGACTCCTaGCGGGCCCCTGCTTGTCAAGTGCCCATGTGCCACTACCTGCCT +
Preference number: 5 (lower is better)
Translates to: GTWIRASPLLCTLDS*RAPACQVPMCHYLP
Trigger: AGGCAGGTAGTGGCACATGGGCACTTGACAAGCAGGGGCCCGTCAGGAGTCTAGAGTACAAAGGAGGGGAGAGGCACGGATCCAGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CCA 90 bp CGCCCGATAAGGTCTTCCAGCTGCGCCAGCCGGATGTCCACGGTCTaGAGTGAAGCCTTCATGGAGTGCTCTCTCTCGTTGACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RPIRSSSCASRMSTV*SEAFMECSLSLTSS
Trigger: GGAGGAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTCACTCCAGACCGTGGACATCCGGCTGGCGCAGCTGGAAGACCTTATCGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 90 bp TGGACAGTCTCCTCATGGACAGGCTGTCCCCTCGGCCCTCCGGCTTaGAGGACTTGCTTCTCTGGAAGGGATTTCGCAGGCTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: WTVSSWTGCPLGPPA*RTCFSGRDFAGLLC
Trigger: ACACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGTCCATGAGGAGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCCTCGGCCCTCCGGCTaGGAGGACTTGCTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSPRPSG*EDLLLW
Trigger: CCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACCCAAGAGGTGTTGGCTaGCCACCTCTGGGTCCCATG +
Preference number: 5 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHPRGVG*PPLGPM
Trigger: CATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGG...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS TCA 90 bp GATAAGGTCTTCCAGCTGCGCCAGCCGGATGTCCACGGTCTGGAGTaGAGCCTTCATGGAGTGCTCTCTCTCGTTGACTTCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: DKVFQLRQPDVHGLE*SLHGVLSLVDFLQP
Trigger: CGGCTGGAGGAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTCACTCCAGACCGTGGACATCCGGCTGGCGCAGCTGGAAGACCTTATC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 90 bp ATTTCTGAGCCGGCGTCTGCTGCGACGGGAGTCCCGAGCGTTTGGTaGACCCCTGCTTGGAACTTAACCTTTTCCACGACTCGGCAAACC +
Preference number: 5 (lower is better)
Translates to: ISEPASAATGVPSVW*TPAWNLTFSTTRQT
Trigger: GGTTTGCCGAGTCGTGGAAAAGGTTAAGTTCCAAGCAGGGGTCCACCAAACGCTCGGGACTCCCGTCGCAGCAGACGCCGGCTCAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS CCA 90 bp AGGATTTCTGAGCCGGCGTCTGCTGCGACGGGAGTCCCGAGCGTTTaGTGGACCCCTGCTTGGAACTTAACCTTTTCCACGACTCGGCAA +
Preference number: 5 (lower is better)
Translates to: RISEPASAATGVPSV*WTPAWNLTFSTTRQ
Trigger: TTGCCGAGTCGTGGAAAAGGTTAAGTTCCAAGCAGGGGTCCACCAAACGCTCGGGACTCCCGTCGCAGCAGACGCCGGCTCAGAAATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS-3UTR CAA 90 bp TGGCTGAGGCCTGGGGGCATCTACCCAGAGTGGGTGATCCACTGCATTGGCTTCCACCTATGGGGGTCTTaGGTGCTGGGTATGATGTGG +
Preference number: 5 (lower is better)
Translates to: WLRPGGIYPEWVIHCIGFHLWGS*VLGMMW
Trigger: CCACATCATACCCAGCACCAAAGACCCCCATAGGTG...GAAGCCAATGCAGTGGATCACCCACTCTGGGTAGATGCCCCCAGGCCTCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGGGAAAAAGGATGGCTaGCCTGGCGACCCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHGKKDG*PGDPKA
Trigger: AGCTTTGGGGTCGCCAGGCAAGCCATCCTTTTTCCC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGTCCTCGAGCGGATTTaGTTGGACTCGGCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSVLERI*LDSARS
Trigger: GGAGCGGGCCGAGTCCAACAAAATCCGCTCGAGGAC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS GCA 90 bp TGCGCCAGCCGGATGTCCACGGTCTGGAGTGAAGCCTTCATGGAGTaGTCTCTCTCGTTGACTTCCTCCAGCCGCATAGACATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CASRMSTVWSEAFME*SLSLTSSSRIDMFS
Trigger: GGAGAACATGTCTATGCGGCTGGAGGAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTCACTCCAGACCGTGGACATCCGGCTGGCGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS GCA 90 bp CTGCCTGTCGAGTTTGTCACTGATGGAGAAGCTCTTCCTGGTGTGTaGATATGGCGCACTTGGCTCCTCTGCCGAGTAGCTGTTGGCGCG +
Preference number: 5 (lower is better)
Translates to: LPVEFVTDGEALPGV*IWRTWLLCRVAVGA
Trigger: CGCGCCAACAGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCACACACCAGGAAGAGCTTCTCCATCAGTGACAAACTCGACAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGGCATCCAACATGGCTaGCTCCAGAGATCCCACCGG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSGIQHG*LQRSHR
Trigger: CCGGTGGGATCTCTGGAGCAAGCCATGTTGGATGCC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCATGAAGTCGCGGTGTTaGGCAGCCACGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSMKSRC*AATASC
Trigger: GCAGCTTGCCGTGGCTGCCAAACACCGCGACTTCAT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGTGGCTCTGCGGCCTTaGGCCTCATTCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSVALRP*ASFSSL
Trigger: CAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCAC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCGTGCTCGAAGCCCCTaGTTTCCCCTGCTCTCATGG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSRARSP*FPLLSW
Trigger: CCATGAGAGCAGGGGAAACAAGGGGCTTCGAGCACG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS CCA 90 bp TCATCCGGGTCGCTCTCGTGTTTCCTCCATCGGCAGCACAGGTGCTaGAATATCATGGTCATGTGGCTGAAGATGATCAGTGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: SSGSLSCFLHRQHRC*NIMVMWLKMISGGG
Trigger: GCCCCCACCACTGATCATCTTCAGCCACATGACCATGATATTCCAGCACCTGTGCTGCCGATGGAGGAAACACGAGAGCGACCCGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 90 bp GTCACTGATGGAGAAGCTCTTCCTGGTGTGTGCATATGGCGCACTTaGCTCCTCTGCCGAGTAGCTGTTGGCGCGCTCTATCTTGGGAAC +
Preference number: 5 (lower is better)
Translates to: VTDGEALPGVCIWRT*LLCRVAVGALYLGN
Trigger: GTTCCCAAGATAGAGCGCGCCAACAGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCACACACCAGGAAGAGCTTCTCCATCAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp TGCTTTCAAAGCTTTGGAAAGCCGATGTTCTGGACAGTCTCCTCATaGACAGGCTGTCCCCTCGGCCCTCCGGCTTGGAGGACTTGCTTC +
Preference number: 5 (lower is better)
Translates to: CFQSFGKPMFWTVSS*TGCPLGPPAWRTCF
Trigger: GAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGTCCATGAGGAGACTGTCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS-3UTR CAA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCATCCGTAGGGCTGAGTaGAGTGTGTTTGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: HSCLRAAFVGESQAERRPIRRAE*SVFADG
Trigger: TCCATCAGCAAACACACTCAACTCAGCCCTACGGAT...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp TGGCTGAGGCCTGGGGGCATCTACCCAGAGTGGGTGATCCACTGCATTGGCTTCACATACATGGCTTTGTaGGAATGGCCACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: WLRPGGIYPEWVIHCIGFTYMAL*EWPPPW
Trigger: CCAAGGAGGTGGCCATTCCAACAAAGCCATGTATGT...GAAGCCAATGCAGTGGATCACCCACTCTGGGTAGATGCCCCCAGGCCTCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp TGGCTGAGGCCTGGGGGCATCTACCCAGAGTGGGTGATCCACTGCATTGGCTTCACAGAGATGAGAAGCTaGGGAAGCTCCAACTGCCAT +
Preference number: 5 (lower is better)
Translates to: WLRPGGIYPEWVIHCIGFTEMRS*GSSNCH
Trigger: ATGGCAGTTGGAGCTTCCCAAGCTTCTCATCTCTGT...GAAGCCAATGCAGTGGATCACCCACTCTGGGTAGATGCCCCCAGGCCTCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACAGCTTGCTCATGGGATaGGACATGGTCTGGTATGGC +
Preference number: 5 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHSLLMG*DMVWYG
Trigger: GCCATACCAGACCATGTCCAATCCCATGAGCAAGCT...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTGCAGGCACGTGGCGTaGCTCCAGTTCTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSCRHVA*LQFFSS
Trigger: TGAGCTGAAGAACTGGAGCAACGCCACGTGCCTGCA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTATGAAGTCGCGGTGTTaGGCAGCCACGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFMKSRC*AATASC
Trigger: GCAGCTTGCCGTGGCTGCCAAACACCGCGACTTCAT...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGTGGCTCTGCGGCCTTaGGCCTCATTCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFVALRP*ASFSSL
Trigger: CAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCAC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCAGGAGGAGGCTAAGTaGGTGGGAAGATCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSQEEAK*VGRSGL
Trigger: CAGGCCTGATCTTCCCACCAACTTAGCCTCCTCCTG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS GCA 90 bp GGAGAAGCTCTTCCTGGTGTGTGCATATGGCGCACTTGGCTCCTCTaGCGAGTAGCTGTTGGCGCGCTCTATCTTGGGAACAGTGATGTT +
Preference number: 5 (lower is better)
Translates to: GEALPGVCIWRTWLL*RVAVGALYLGNSDV
Trigger: AACATCACTGTTCCCAAGATAGAGCGCGCCAACAGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCACACACCAGGAAGAGCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS GCA 90 bp CTCCGGCTTGGAGGACTTGCTTCTCTGGAAGGGATTTCGCAGGCTTaGTGTGTTCCGCTGCCTGTCGAGTTTGTCACTGATGGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LRLGGLASLEGISQA*CVPLPVEFVTDGEA
Trigger: AGCTTCTCCATCAGTGACAAACTCGACAGGCAGCGGAACACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp CTGCGAGCGATGTCGACTCTGTTCCAGGCTAAAGCTAAGCTCAGTTaGTCTGGGGCCGAGGCATTGGCTCCTTTGAGTAAAGCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LRAMSTLFQAKAKLS*SGAEALAPLSKAVR
Trigger: CCTGACAGCTTTACTCAAAGGAGCCAATGCCTCGGCCCCAGACCAACTGAGCTTAGCTTTAGCCTGGAACAGAGTCGACATCGCTCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 90 bp GGGTTCTCTCTGAGTTATCACCCTCCTGGGAGGATATTGCAATGGTaGCTCTGCGGCCTTTGGCCTCATTCTCCTCACTGTCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GFSLSYHPPGRILQW*LCGLWPHSPHCQSW
Trigger: CCAGCTCTGACAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAGGGTGATAACTCAGAGAGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp GTCGAGTTTGTCACTGATGGAGAAGCTCTTCCTGGTGTGTGCATATaGCGCACTTGGCTCCTCTGCCGAGTAGCTGTTGGCGCGCTCTAT +
Preference number: 5 (lower is better)
Translates to: VEFVTDGEALPGVCI*RTWLLCRVAVGALY
Trigger: ATAGAGCGCGCCAACAGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCACACACCAGGAAGAGCTTCTCCATCAGTGACAAACTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGACATACATGGCTTTGTaGGAATGGCCACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: EAPGILRRSSTAASELPLTYMAL*EWPPPW
Trigger: CCAAGGAGGTGGCCATTCCAACAAAGCCATGTATGT...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTGAGGCCTGAGTTCTaGCGCATGCGGAGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLRPEF*RMRSRP
Trigger: GGGCCGGCTCCGCATGCGCAAGAACTCAGGCCTCAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACACAGCAATGAGGAGGTaGACCAGCAAGATGTTTGCC +
Preference number: 5 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHTAMRR*TSKMFA
Trigger: GGCAAACATCTTGCTGGTCAACCTCCTCATTGCTGT...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGAGTGCTCTCTCTCGTaGACTTCCTCCAGCCGCATA +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSECSLS*TSSSRI
Trigger: TATGCGGCTGGAGGAAGTCAACGAGAGAGAGCACTC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAATCAATGCTCCGGCTaGGAGGTCTGTCTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSNQCSG*EVCLWV
Trigger: CACCCACAGACAGACCTCCAAGCCGGAGCATTGATT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTAGGGATTTCGCAGGCTaGCTGTGTTCCGCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFRDFAG*LCSAAC
Trigger: ACAGGCAGCGGAACACAGCAAGCCTGCGAAATCCCT...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGCTGAATTTCCCCCTTaGCCCCATAGGCCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFAEFPP*PHRPQP
Trigger: TGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS TCA 90 bp GATTTCGCAGGCTTGCTGTGTTCCGCTGCCTGTCGAGTTTGTCACTaGTGGAGAAGCTCTTCCTGGTGTGTGCATATGGCGCACTTGGCT +
Preference number: 5 (lower is better)
Translates to: DFAGLLCSAACRVCH*WRSSSWCVHMAHLA
Trigger: AGCCAAGTGCGCCATATGCACACACCAGGAAGAGCTTCTCCATCAGTGACAAACTCGACAGGCAGCGGAACACAGCAAGCCTGCGAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS TCA 90 bp GATGCTGAGCTTCCAATGCTGGCCCCTGGAACCCTGCCTCTCAGCTaGGAGGACCGTCATTCGCCATCAACTAGCACCATTTCACTTCTA +
Preference number: 5 (lower is better)
Translates to: DAELPMLAPGTLPLS*EDRHSPSTSTISLL
Trigger: TAGAAGTGAAATGGTGCTAGTTGATGGCGAATGACGGTCCTCTCAGCTGAGAGGCAGGGTTCCAGGGGCCAGCATTGGAAGCTCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS GCA 90 bp CTTTCATCCGGGTCGCTCTCGTGTTTCCTCCATCGGCAGCACAGGTaGTGGAATATCATGGTCATGTGGCTGAAGATGATCAGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LSSGSLSCFLHRQHR*WNIMVMWLKMISGG
Trigger: CCCACCACTGATCATCTTCAGCCACATGACCATGATATTCCAGCACCTGTGCTGCCGATGGAGGAAACACGAGAGCGACCCGGATGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS GCA 90 bp TGCTACCCACACTACTGGCTAACCAGCCCAGCTGCCACCAGGGCCTaGCACAATGACATGCTTTGCCTCTCTGGACCGATTTTGTCTTAT +
Preference number: 5 (lower is better)
Translates to: CYPHYWLTSPAATRA*HNDMLCLSGPILSY
Trigger: ATAAGACAAAATCGGTCCAGAGAGGCAAAGCATGTCATTGTGGCAGGCCCTGGTGGCAGCTGGGCTGGTTAGCCAGTAGTGTGGGTAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CCA 90 bp ATGATGGCCGGCACGATCCAAGCTCCTGTCTTGCAGGGAGGCAGCTaGATTATTTTACCATCCTCTCGGGTCTCATTCTGTCCACAGGGA +
Preference number: 5 (lower is better)
Translates to: MMAGTIQAPVLQGGS*IILPSSRVSFCPQG
Trigger: TCCCTGTGGACAGAATGAGACCCGAGAGGATGGTAAAATAATCCAGCTGCCTCCCTGCAAGACAGGAGCTTGGATCGTGCCGGCCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 90 bp TGTCTGTGGGTGCAAGTGTTGCATAGGCACTACTTGAAGGGGCTGTaGAAGGTACTGGAGTTGAAAAGCTTGGCTCGCCCAGCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: CLWVQVLHRHYLKGL*KVLELKSLARPAQG
Trigger: TCCTTGGGCTGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAACACTTGCACCCACAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp CCTCTTCTAGAAGAAAGGGTGTGGTGGCTAGGTAGCGGCTACTTTTaGAACGCTCAATGGTGTGGTACATCGGAGGCTCTGAGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PLLEERVWWLGSGYF*NAQWCGTSEALSPR
Trigger: CCTGGGACTCAGAGCCTCCGATGTACCACACCATTGAGCGTTCCAAAAGTAGCCGCTACCTAGCCACCACACCCTTTCTTCTAGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp ACAGGGTTCTCTCTGAGTTATCACCCTCCTGGGAGGATATTGCAATaGTGGCTCTGCGGCCTTTGGCCTCATTCTCCTCACTGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: TGFSLSYHPPGRILQ*WLCGLWPHSPHCQS
Trigger: GCTCTGACAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAGGGTGATAACTCAGAGAGAACCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp AGGTTTAGTTGTGCTTGCTTTCAAAGCTTTGGAAAGCCGATGTTCTaGACAGTCTCCTCATGGACAGGCTGTCCCCTCGGCCCTCCGGCT +
Preference number: 5 (lower is better)
Translates to: RFSCACFQSFGKPMF*TVSSWTGCPLGPPA
Trigger: AGCCGGAGGGCCGAGGGGACAGCCTGTCCATGAGGAGACTGTCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCAAGCACAACTAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357533.6
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGCACCTATGGGGGTCTTaGGTGCTGGGTATGATGTGG +
Preference number: 5 (lower is better)
Translates to: STHTLVSKQALGFFHGAWHLWGS*VLGMMW
Trigger: CCACATCATACCCAGCACCAAAGACCCCCATAGGTG...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGGAATGGCCACCTCCTaGGAACTCAATGGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSGMATS*ELNGPK
Trigger: TTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCGCACATACATGGCTTaGTTGGAATGGCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSRTYMA*LEWPPP
Trigger: AGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTCGCACATACATGGCTTaGTTGGAATGGCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: SSSATPEIARPTPPLLPPRTYMA*LEWPPP
Trigger: AGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCG...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAGCTTGCTCATGGGATaGGACATGGTCTGGTATGGC +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSSLLMG*DMVWYG
Trigger: GCCATACCAGACCATGTCCAATCCCATGAGCAAGCT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGACAATCGAGATCACATaGGGTCCTCCTTCCACTATG +
Preference number: 5 (lower is better)
Translates to: EAPGILRRSSTAASELPLTIEIT*GPPSTM
Trigger: CATAGTGGAAGGAGGACCCAATGTGATCTCGATTGT...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTCCCACCGGCCACTGTaGCCCGTAAATAAAGATCTG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSSHRPL*PVNKDL
Trigger: CAGATCTTTATTTACGGGCAACAGTGGCCGGTGGGA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTGAGGCCTGAGTTCTaGCGCATGCGGAGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLRPEF*RMRSRP
Trigger: GGGCCGGCTCCGCATGCGCAAGAACTCAGGCCTCAA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCTGGAGGACTCCCCGTaGTTTCGTCCCAACATTGCT +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFLEDSP*FRPNIA
Trigger: AGCAATGTTGGGACGAAACAACGGGGAGTCCTCCAG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTGAAGGGCTGGTCTaGGAGACGAAGGATCATTCC +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFPEGLV*ETKDHS
Trigger: GGAATGATCCTTCGTCTCCAAGACCAGCCCTTCAGG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGTCCTCGAGCGGATTTaGTTGGACTCGGCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLVLERI*LDSARS
Trigger: GGAGCGGGCCGAGTCCAACAAAATCCGCTCGAGGAC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACCTCGGCCCTCCGGCTaGGAGGACTTGCTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKPRPSG*EDLLLW
Trigger: CCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCCTCGGCCCTCCGGCTaGGAGGACTTGCTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSPRPSG*EDLLLW
Trigger: CCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGGCCCCTCCATGTGTTaGAATTTGCAGCCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSGPSMC*NLQPLS
Trigger: ACTGAGAGGCTGCAAATTCAAACACATGGAGGGGCC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS GCA 90 bp GACTTGCTTCTCTGGAAGGGATTTCGCAGGCTTGCTGTGTTCCGCTaGCTGTCGAGTTTGTCACTGATGGAGAAGCTCTTCCTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: DLLLWKGFRRLAVFR*LSSLSLMEKLFLVC
Trigger: ACACACCAGGAAGAGCTTCTCCATCAGTGACAAACTCGACAGGCAGCGGAACACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS-3UTR CAA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGGGAATGGCCACCTCCTaGGAACTCAATGGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: STHTLVSKQALGFFHGAWGMATS*ELNGPK
Trigger: TTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCC...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCGCACATACATGGCTTaGTTGGAATGGCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFRTYMA*LEWPPP
Trigger: AGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATCGCACATACATGGCTTaGTTGGAATGGCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHRTYMA*LEWPPP
Trigger: AGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCG...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTTCCAACTGCCATTCCTaGGTCATCAGGTGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: SSSATPEIARPTPPLLPPSNCHS*VIRCKR
Trigger: CCTCTTACACCTGATGACCAAGGAATGGCAGTTGGA...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTACAGAGATGAGAAGCTaGGGAAGCTCCAACTGCCAT +
Preference number: 5 (lower is better)
Translates to: SSSATPEIARPTPPLLPPTEMRS*GSSNCH
Trigger: ATGGCAGTTGGAGCTTCCCAAGCTTCTCATCTCTGT...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTTGGGAATGCATGCTGTaGAGAACAGTGAGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: SSSATPEIARPTPPLLPPWECML*RTVSLL
Trigger: GAGCAAGCTCACTGTTCTCAACAGCATGCATTCCCA...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGGCATCCAACATGGCTaGCTCCAGAGATCCCACCGG +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAGIQHG*LQRSHR
Trigger: CCGGTGGGATCTCTGGAGCAAGCCATGTTGGATGCC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGGCATCCAACATGGCTaGCTCCAGAGATCCCACCGG +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWGIQHG*LQRSHR
Trigger: CCGGTGGGATCTCTGGAGCAAGCCATGTTGGATGCC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGGATACTCTCGCTTTTaGACATCCCTGACCAAGTGG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSGYSRF*TSLTKW
Trigger: CCACTTGGTCAGGGATGTCAAAAAGCGAGAGTATCC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377105.5
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCATGAAGTCGCGGTGTTaGGCAGCCACGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLMKSRC*AATASC
Trigger: GCAGCTTGCCGTGGCTGCCAAACACCGCGACTTCAT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCACTGGAGGACTCCCCGTaGTTTCGTCCCAACATTGCT +
Preference number: 5 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPLEDSP*FRPNIA
Trigger: AGCAATGTTGGGACGAAACAACGGGGAGTCCTCCAG...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGTCCTCGAGCGGATTTaGTTGGACTCGGCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKVLERI*LDSARS
Trigger: GGAGCGGGCCGAGTCCAACAAAATCCGCTCGAGGAC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCATACTCTCTTGGAGCTaGAAGGTGTTCCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSILSWS*KVFPSW
Trigger: CCAGGAAGGGAACACCTTCAAGCTCCAAGAGAGTAT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTTAAGGTTGGAGAAGTaGGGGACATGGTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSLRLEK*GTWSPH
Trigger: GTGAGGAGACCATGTCCCCAACTTCTCCAACCTTAA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGGAACAGTGATGTTGTaGGACAGGGTTCTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSGTVML*DRVLSE
Trigger: CTCAGAGAGAACCCTGTCCAACAACATCACTGTTCC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGTGCATATGGCGCACTaGGCTCCTCTGCCGAGTAGC +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLVHMAH*APLPSS
Trigger: GCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCAC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGAAAACGGCAGGCATCTaGTGTTTATCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: EAPGILRRSSTAASELPLKTAGI*CLSSGV
Trigger: CACTCCAGAAGATAAACACAAGATGCCTGCCGTTTT...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCGTGCTCGAAGCCCCTaGTTTCCCCTGCTCTCATGG +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLRARSP*FPLLSW
Trigger: CCATGAGAGCAGGGGAAACAAGGGGCTTCGAGCACG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATACTAGTCAAGTAGCCTaGCCTGAGCCCCTGAACCTT +
Preference number: 5 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHTSQVA*PEPLNL
Trigger: AAGGTTCAGGGGCTCAGGCAAGGCTACTTGACTAGT...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAAGGCTTTGGGCCTCTaGGGGCCGAAGAGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLKALGL*GPKRLW
Trigger: CCACAACCTCTTCGGCCCCAAGAGGCCCAAAGCCTT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCAGACCCAAGAGGTGTaGGCTTGCCACCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLQTQEV*ACHLWV
Trigger: GACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCTG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS TCA 90 bp GGCGACTTTCATTTTTCTCATTCTGAAGCACGGAGATACTGGGGGTaGGGCCAACATGCTGGCCTATCAGACGCCCACAGCAACACCTAT +
Preference number: 5 (lower is better)
Translates to: GDFHFSHSEARRYWG*GQHAGLSDAHSNTY
Trigger: ATAGGTGTTGCTGTGGGCGTCTGATAGGCCAGCATGTTGGCCTCACCCCCAGTATCTCCGTGCTTCAGAATGAGAAAAATGAAAGTCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000437699.3
ENST00000677594.1
ENST00000677713.2
CDS TCA 90 bp GCGCTCTATCTTGGGAACAGTGATGTTGTTGGACAGGGTTCTCTCTaGGTTATCACCCTCCTGGGAGGATATTGCAATGGTGGCTCTGCG +
Preference number: 5 (lower is better)
Translates to: ALYLGNSDVVGQGSL*VITLLGGYCNGGSA
Trigger: CGCAGAGCCACCATTGCAATATCCTCCCAGGAGGGTGATAACTCAGAGAGAACCCTGTCCAACAACATCACTGTTCCCAAGATAGAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS GCA 90 bp TGGTCTTCTGGAATCAGGAACAATGGCCAAGGTGTTGGCAGGGGCTaGAGGAGCTTTGGGTTCTTTTGCTACAGAGTGGGAACTAGTAGC +
Preference number: 5 (lower is better)
Translates to: WSSGIRNNGQGVGRG*RSFGFFCYRVGTSS
Trigger: GCTACTAGTTCCCACTCTGTAGCAAAAGAACCCAAAGCTCCTGCAGCCCCTGCCAACACCTTGGCCATTGTTCCTGATTCCAGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp GTGTTGGCAGGGGCTGCAGGAGCTTTGGGTTCTTTTGCTACAGAGTaGGAACTAGTAGCCCGGTGTAGGCTCAGGGACCTTTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: VLAGAAGALGSFATE*ELVARCRLRDLSLK
Trigger: TTTTAAAGAAAGGTCCCTGAGCCTACACCGGGCTACTAGTTCCCACTCTGTAGCAAAAGAACCCAAAGCTCCTGCAGCCCCTGCCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp ACAGTGATGTTGTTGGACAGGGTTCTCTCTGAGTTATCACCCTCCTaGGAGGATATTGCAATGGTGGCTCTGCGGCCTTTGGCCTCATTC +
Preference number: 5 (lower is better)
Translates to: TVMLLDRVLSELSPS*EDIAMVALRPLASF
Trigger: GAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAGGGTGATAACTCAGAGAGAACCCTGTCCAACAACATCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS-3UTR CAA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGACAGAGATGAGAAGCTaGGGAAGCTCCAACTGCCAT +
Preference number: 5 (lower is better)
Translates to: STHTLVSKQALGFFHGAWTEMRS*GSSNCH
Trigger: ATGGCAGTTGGAGCTTCCCAAGCTTCTCATCTCTGT...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGGCCCATGTCTCGTATaGTACAATTCCTCTAGTCTG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSGPCLV*YNSSSL
Trigger: CAGACTAGAGGAATTGTACAATACGAGACATGGGCC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTGCAGGCACGTGGCGTaGCTCCAGTTCTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWCRHVA*LQFFSS
Trigger: TGAGCTGAAGAACTGGAGCAACGCCACGTGCCTGCA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAACTGGAGGACTCCCCGTaGTTTCGTCCCAACATTGCT +
Preference number: 5 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQLEDSP*FRPNIA
Trigger: AGCAATGTTGGGACGAAACAACGGGGAGTCCTCCAG...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGGGGAAAAAGGATGGCTaGCCTGGCGACCCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWGKKDG*PGDPKA
Trigger: AGCTTTGGGGTCGCCAGGCAAGCCATCCTTTTTCCC...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATACAGCAATGAGGAGGTaGACCAGCAAGATGTTTGCC +
Preference number: 5 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHTAMRR*TSKMFA
Trigger: GGCAAACATCTTGCTGGTCAACCTCCTCATTGCTGT...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGAGTGCTCTCTCTCGTaGACTTCCTCCAGCCGCATA +
Preference number: 5 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQECSLS*TSSSRI
Trigger: TATGCGGCTGGAGGAAGTCAACGAGAGAGAGCACTC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCTCGAGCGGATTTTGTaGGACTCGGCCCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLERIL*DSARSR
Trigger: TCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGAG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCTCGAGCGGATTTTGTaGGACTCGGCCCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSLERIL*DSARSR
Trigger: TCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGAG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCTCGAGCGGATTTTGTaGGACTCGGCCCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLERIL*DSARSR
Trigger: TCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGAG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGTCCTCGAGCGGATTTaGTTGGACTCGGCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMVLERI*LDSARS
Trigger: GGAGCGGGCCGAGTCCAACAAAATCCGCTCGAGGAC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCTGGAGTTGAAAAGCTaGGCTCGCCCAGCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLLELKS*ARPAQG
Trigger: TCCTTGGGCTGGGCGAGCCAAGCTTTTCAACTCCAG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAATCAATGCTCCGGCTaGGAGGTCTGTCTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQNQCSG*EVCLWV
Trigger: CACCCACAGACAGACCTCCAAGCCGGAGCATTGATT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGTGGCTCTGCGGCCTTaGGCCTCATTCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: FTAICALLHYHKWTFRSHVALRP*ASFSSL
Trigger: CAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCAC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCTTGGGAACAGTGATGTaGTTGGACAGGGTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSLGTVM*LDRVLS
Trigger: AGAGAGAACCCTGTCCAACAACATCACTGTTCCCAA...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGAGGGATTTCGCAGGCTaGCTGTGTTCCGCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLRDFAG*LCSAAC
Trigger: ACAGGCAGCGGAACACAGCAAGCCTGCGAAATCCCT...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCGTGCTCGAAGCCCCTaGTTTCCCCTGCTCTCATGG +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDRARSP*FPLLSW
Trigger: CCATGAGAGCAGGGGAAACAAGGGGCTTCGAGCACG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAAGGGGATGCACGATTTaGAAGAAGAGGGACAGCCTG +
Preference number: 5 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPRGCTI*KKRDSL
Trigger: CAGGCTGTCCCTCTTCTTCAAAATCGTGCATCCCCT...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCAAGGCTTTGGGCCTCTaGGGGCCGAAGAGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSKALGL*GPKRLW
Trigger: CCACAACCTCTTCGGCCCCAAGAGGCCCAAAGCCTT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGAGTGGTGTGAAAAATaGGCAGTTACGTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSEWCEK*AVTSWR
Trigger: CCTCCAAGACGTAACTGCCAATTTTTCACACCACTC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAGAATCAATGCCACATaGCTGCACAGAGAACCCAGA +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSRINAT*LHREPR
Trigger: TCTGGGTTCTCTGTGCAGCAATGTGGCATTGATTCT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACTCTCTTGTCATATCATaGGATCACACATTCACAGCG +
Preference number: 5 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHSLVIS*DHTFTA
Trigger: CGCTGTGAATGTGTGATCCAATGATATGACAAGAGA...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGTAGAAACAGTCACGTaGCTTTCATTAGCAGTGATG +
Preference number: 5 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHVETVT*LSLAVM
Trigger: CATCACTGCTAATGAAAGCAACGTGACTGTTTCTAC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATGTCCAGTTCACACATTaGTGTTTTCTGGATCCGGCC +
Preference number: 5 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHVQFTH*CFLDPA
Trigger: GGCCGGATCCAGAAAACACAAATGTGTGAACTGGAC...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCACCCAAACTATTGCCTTaGGGACTGAATGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPPKLLP*GLNAAG
Trigger: GCCAGCAGCATTCAGTCCCAAAGGCAATAGTTTGGG...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCACATCCAGGCACAAGGCTGAATTTCCCCCTTTGCCCCATAGGCCTCAGCCACGGTTCTCAGTGTATTTaGTGTGTACACTCACCAAGT +
Preference number: 5 (lower is better)
Translates to: AHPGTRLNFPLCPIGLSHGSQCI*CVHSPS
Trigger: ACTTGGTGAGTGTACACACAAAATACACTGAGAACC...GTGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGCCTTGTGCCTGGATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACAGCTGCCTCAGAGCTGCCTTTGTAGGTGAGAGCCAGGCAGAAAGGAGGCCCCGCCTAAGTATTCCTTaGAAATGCAAATTACCTGAC +
Preference number: 5 (lower is better)
Translates to: HSCLRAAFVGESQAERRPRLSIP*KCKLPD
Trigger: GTCAGGTAATTTGCATTTCAAAGGAATACTTAGGCG...GGGCCTCCTTTCTGCCTGGCTCTCACCTACAAAGGCAGCTCTGAGGCAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGAACTACAGTTTACCCTaGAACAACAGGGGTTTGAAC +
Preference number: 5 (lower is better)
Translates to: EAPGILRRSSTAASELPLNYSLP*NNRGLN
Trigger: GTTCAAACCCCTGTTGTTCAAGGGTAAACTGTAGTT...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS TCA 90 bp GACTGGATGTCATTTCGGGAGAGGCGACTTTCATTTTTCTCATTCTaGAGCACGGAGATACTGGGGGTGAGGCCAACATGCTGGCCTATC +
Preference number: 5 (lower is better)
Translates to: DWMSFRERRLSFFSF*STEILGVRPTCWPI
Trigger: GATAGGCCAGCATGTTGGCCTCACCCCCAGTATCTCCGTGCTTCAGAATGAGAAAAATGAAAGTCGCCTCTCCCGAAATGACATCCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000437699.3
ENST00000677594.1
ENST00000677713.2
CDS GCA 90 bp CTAACCAGCCCAGCTGCCACCAGGGCCTGCCACAATGACATGCTTTaGCTCTCTGGACCGATTTTGTCTTATTACCAAGTACTGAACTTG +
Preference number: 5 (lower is better)
Translates to: LTSPAATRACHNDML*LSGPILSYYQVLNL
Trigger: CAAGTTCAGTACTTGGTAATAAGACAAAATCGGTCCAGAGAGGCAAAGCATGTCATTGTGGCAGGCCCTGGTGGCAGCTGGGCTGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CCA 90 bp TCTCCACACCTGCAAATTCCATTAGGGCAGAGGCTTCCTGGAACTTaGAAGACTAGTCAAGTAGCCTTGCCTGAGCCCCTGAACCTTCTT +
Preference number: 5 (lower is better)
Translates to: SPHLQIPLGQRLPGT*KTSQVALPEPLNLL
Trigger: AAGAAGGTTCAGGGGCTCAGGCAAGGCTACTTGACTAGTCTTCCAAGTTCCAGGAAGCCTCTGCCCTAATGGAATTTGCAGGTGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377110.9
ENST00000377111.8
ENST00000677713.2
CDS-3UTR CAA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAATCCGTAGGGCTGAGTaGAGTGTGTTTGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPIRRAE*SVFADG
Trigger: TCCATCAGCAAACACACTCAACTCAGCCCTACGGAT...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTCGCACATACATGGCTTaGTTGGAATGGCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESRTYMA*LEWPPP
Trigger: AGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCG...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp TCTTCCTCTGCCACCCCTGAGATAGCAAGACCAACCCCTCCTCTTCTTCCTCCTTTCCCAAAGACTTGCTaGAGTTTTGGCTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SSSATPEIARPTPPLLPPFPKTC*SFGWSS
Trigger: TGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGAA...AGGAGGAAGAAGAGGAGGGGTTGGTCTTGCTATCTCAGGGGTGGCAGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGGTTGTCATTGCTGCTTaGATGAGCCCTTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: STHTLVSKQALGFFHGAWVVIAA*MSPFPK
Trigger: CTTTGGGAAAGGGCTCATCAAAGCAGCAATGACAAC...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGTTGTCATTGCTGCTTaGATGAGCCCTTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFVVIAA*MSPFPK
Trigger: CTTTGGGAAAGGGCTCATCAAAGCAGCAATGACAAC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCATGGGAATGCATGCTGTaGAGAACAGTGAGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPWECML*RTVSLL
Trigger: GAGCAAGCTCACTGTTCTCAACAGCATGCATTCCCA...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGGCCCATGTCTCGTATaGTACAATTCCTCTAGTCTG +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFGPCLV*YNSSSL
Trigger: CAGACTAGAGGAATTGTACAATACGAGACATGGGCC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGGAATATCATCCCTCTaGGGGCCGAAGAGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLGISSL*GPKRLW
Trigger: CCACAACCTCTTCGGCCCCAAGAGGGATGATATTCC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360823.6
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTGCAGGCACGTGGCGTaGCTCCAGTTCTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSCRHVA*LQFFSS
Trigger: TGAGCTGAAGAACTGGAGCAACGCCACGTGCCTGCA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGATGAAGTCGCGGTGTTaGGCAGCCACGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMMKSRC*AATASC
Trigger: GCAGCTTGCCGTGGCTGCCAAACACCGCGACTTCAT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTTGAGGCCTGAGTTCTaGCGCATGCGGAGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSLRPEF*RMRSRP
Trigger: GGGCCGGCTCCGCATGCGCAAGAACTCAGGCCTCAA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTTCTGCCTCCTTCTCTaGGAGGTGGATTTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAFCLLL*EVDFLG
Trigger: GCCCAGGAAATCCACCTCCAAGAGAAGGAGGCAGAA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCCTGAAGGGCTGGTCTaGGAGACGAAGGATCATTCC +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLPEGLV*ETKDHS
Trigger: GGAATGATCCTTCGTCTCCAAGACCAGCCCTTCAGG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGGGAAAAAGGATGGCTaGCCTGGCGACCCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: EHALNPLCLALGQIKCFLGKKDG*PGDPKA
Trigger: AGCTTTGGGGTCGCCAGGCAAGCCATCCTTTTTCCC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAGGATGTTCACGGAATaGTCCAGAGGGTCTATATCA +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSRMFTE*SRGSIS
Trigger: TGATATAGACCCTCTGGACAATTCCGTGAACATCCT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACTGGAGTTGAAAAGCTaGGCTCGCCCAGCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: RLILNKEDALHQSPVMEPLELKS*ARPAQG
Trigger: TCCTTGGGCTGGGCGAGCCAAGCTTTTCAACTCCAG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCACTGTGGGTGCAAGTGTaGCATAGGCACTACTTGAAG +
Preference number: 5 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPLWVQV*HRHYLK
Trigger: CTTCAAGTAGTGCCTATGCAACACTTGCACCCACAG...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGAATCAATGCTCCGGCTaGGAGGTCTGTCTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWNQCSG*EVCLWV
Trigger: CACCCACAGACAGACCTCCAAGCCGGAGCATTGATT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGTGCATATGGCGCACTaGGCTCCTCTGCCGAGTAGC +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMVHMAH*APLPSS
Trigger: GCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCAC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGCTGCCTGTCGAGTTaGTCACTGATGGAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERARCLSS*SLMEKL
Trigger: GAGCTTCTCCATCAGTGACAAACTCGACAGGCAGCG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGAACCAGCCTTTCTTTaGGTTGACTCCAATCTGAGA +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSEPAFL*VDSNLR
Trigger: TCTCAGATTGGAGTCAACCAAAAGAAAGGCTGGTTC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAATCCAGCACACAAACATaGTGCAAACGCACAAGGGCC +
Preference number: 5 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQSSTQT*CKRTRA
Trigger: GGCCCTTGTGCGTTTGCACAATGTTTGTGTGCTGGA...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCCAAACCCTACTTCTGTaGACTTTCACCAGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSQTLLL*TFTSPV
Trigger: AACTGGACTGGTGAAAGTCAACAGAAGTAGGGTTTG...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTGGCAGACATGTTTGTTaGGCTAGGACAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFGRHVC*ARTVFG
Trigger: TCCAAACACTGTCCTAGCCAAACAAACATGTCTGCC...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGCCCCCGGAATTTTGAGGAGGAGCTCCACAGCTGCCTCAGAGCTGCCTTTGTACCTGAGATTTCACTaGAGGAAGAATTCAAGGACT +
Preference number: 5 (lower is better)
Translates to: EAPGILRRSSTAASELPLYLRFH*RKNSRT
Trigger: AGTCCTTGAATTCTTCCTCAAGTGAAATCTCAGGTA...CAAAGGCAGCTCTGAGGCAGCTGTGGAGCTCCTCCTCAAAATTCCGGGGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS GCA 90 bp CACTTTGTCTCCAAGACCTCCAGGGAAGGCAGCTCTGTCCGCAATTaGTTGAGGGGCATTGACACACCTTGTGTCAATACAGTCTGTAAT +
Preference number: 5 (lower is better)
Translates to: HFVSKTSREGSSVRN*LRGIDTPCVNTVCN
Trigger: ATTACAGACTGTATTGACACAAGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAGAGCTGCCTTCCCTGGAGGTCTTGGAGACAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACACCTATGGGGGTCTTaGGTGCTGGGTATGATGTGG +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKHLWGS*VLGMMW
Trigger: CCACATCATACCCAGCACCAAAGACCCCCATAGGTG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCACCTATGGGGGTCTTaGGTGCTGGGTATGATGTGG +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDHLWGS*VLGMMW
Trigger: CCACATCATACCCAGCACCAAAGACCCCCATAGGTG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTATCCGTAGGGCTGAGTaGAGTGTGTTTGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESIRRAE*SVFADG
Trigger: TCCATCAGCAAACACACTCAACTCAGCCCTACGGAT...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTTCCAGTGGTCCCGTaGTCAGCCAGAATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWFPVVP*SARMKW
Trigger: CCACTTCATTCTGGCTGACAACGGGACCACTGGAAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGCACCTTGACCGATTCTaGTGTTTATCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: STHTLVSKQALGFFHGAWHLDRF*CLSSGV
Trigger: CACTCCAGAAGATAAACACAAGAATCGGTCAAGGTG...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGCACCACAGGAACACCTaGACCGATTCTTGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: STHTLVSKQALGFFHGAWHHRNT*TDSCVY
Trigger: ATAAACACAAGAATCGGTCAAGGTGTTCCTGTGGTG...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGGATACTCTCGCTTTTaGACATCCCTGACCAAGTGG +
Preference number: 5 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQGYSRF*TSLTKW
Trigger: CCACTTGGTCAGGGATGTCAAAAAGCGAGAGTATCC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTGCAGGCACGTGGCGTaGCTCCAGTTCTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMCRHVA*LQFFSS
Trigger: TGAGCTGAAGAACTGGAGCAACGCCACGTGCCTGCA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTTCTGCCTCCTTCTCTaGGAGGTGGATTTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: EHALNPLCLALGQIKCFLFCLLL*EVDFLG
Trigger: GCCCAGGAAATCCACCTCCAAGAGAAGGAGGCAGAA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTCTGCCTCCTTCTCTaGGAGGTGGATTTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRFCLLL*EVDFLG
Trigger: GCCCAGGAAATCCACCTCCAAGAGAAGGAGGCAGAA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACTGGAGGACTCCCCGTaGTTTCGTCCCAACATTGCT +
Preference number: 5 (lower is better)
Translates to: RLILNKEDALHQSPVMEPLEDSP*FRPNIA
Trigger: AGCAATGTTGGGACGAAACAACGGGGAGTCCTCCAG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACCTGAAGGGCTGGTCTaGGAGACGAAGGATCATTCC +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKPEGLV*ETKDHS
Trigger: GGAATGATCCTTCGTCTCCAAGACCAGCCCTTCAGG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACCTGAAGGGCTGGTCTaGGAGACGAAGGATCATTCC +
Preference number: 5 (lower is better)
Translates to: RLILNKEDALHQSPVMEPPEGLV*ETKDHS
Trigger: GGAATGATCCTTCGTCTCCAAGACCAGCCCTTCAGG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGAGTGCTCTCTCTCGTaGACTTCCTCCAGCCGCATA +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSECSLS*TSSSRI
Trigger: TATGCGGCTGGAGGAAGTCAACGAGAGAGAGCACTC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTGGGGCTGCAGGAGCTTaGGGTTCTTTTGCTACAGAG +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSGAAGA*GSFATE
Trigger: CTCTGTAGCAAAAGAACCCAAAGCTCCTGCAGCCCC...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGGGGCTGCAGGAGCTTaGGGTTCTTTTGCTACAGAG +
Preference number: 5 (lower is better)
Translates to: RLILNKEDALHQSPVMEPGAAGA*GSFATE
Trigger: CTCTGTAGCAAAAGAACCCAAAGCTCCTGCAGCCCC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGGGGCTGCAGGAGCTTaGGGTTCTTTTGCTACAGAG +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRGAAGA*GSFATE
Trigger: CTCTGTAGCAAAAGAACCCAAAGCTCCTGCAGCCCC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCTGGAGTTGAAAAGCTaGGCTCGCCCAGCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMLELKS*ARPAQG
Trigger: TCCTTGGGCTGGGCGAGCCAAGCTTTTCAACTCCAG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTGGAAGGTACTGGAGTaGAAAAGCTTGGCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLWKVLE*KSLARP
Trigger: TGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCCA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCGCTGCCTGTCGAGTTaGTCACTGATGGAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRRCLSS*SLMEKL
Trigger: GAGCTTCTCCATCAGTGACAAACTCGACAGGCAGCG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACGCTGCCTGTCGAGTTaGTCACTGATGGAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKRCLSS*SLMEKL
Trigger: GAGCTTCTCCATCAGTGACAAACTCGACAGGCAGCG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGAGGGATTTCGCAGGCTaGCTGTGTTCCGCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMRDFAG*LCSAAC
Trigger: ACAGGCAGCGGAACACAGCAAGCCTGCGAAATCCCT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCCGGAGCAGCTCCTGTaGCTTTCATTTTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDPEQLL*LSFCCS
Trigger: GCTGCAGCAAAATGAAAGCAACAGGAGCTGCTCCGG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377105.5
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCCCGGAGCAGCTCCTGTaGCTTTCATTTTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSPEQLL*LSFCCS
Trigger: GCTGCAGCAAAATGAAAGCAACAGGAGCTGCTCCGG...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377105.5
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGGCAGGTTCCCCTTTTaGACATCCCTGACCAAGTGG +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDGRFPF*TSLTKW
Trigger: CCACTTGGTCAGGGATGTCAAAAAGGGGAACCTGCC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377110.9
CDS-3UTR CAA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGGCAGGTTCCCCTTTTaGACATCCCTGACCAAGTGG +
Preference number: 5 (lower is better)
Translates to: RLILNKEDALHQSPVMEPGRFPF*TSLTKW
Trigger: CCACTTGGTCAGGGATGTCAAAAAGGGGAACCTGCC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360823.6
ENST00000377110.9
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTATTGGCAGTTACGTCTaGGAGGTGTTCAGGAGGACG +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAIGSYV*EVFRRT
Trigger: CGTCCTCCTGAACACCTCCAAGACGTAACTGCCAAT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCAAGAAGCCCAACTGTTaGAGTGAATTCTTAACTGGC +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSKKPNC*SEFLTG
Trigger: GCCAGTTAAGAATTCACTCAAACAGTTGGGCTTCTT...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGCTGAATTTCCCCCTTaGCCCCATAGGCCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMAEFPP*PHRPQP
Trigger: TGGCTGAGGCCTATGGGGCAAAGGGGGAAATTCAGC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS TCA 90 bp TTGTCTCCAAGACCTCCAGGGAAGGCAGCTCTGTCCGCAATTGCTTaGGGGGCATTGACACACCTTGTGTCAATACAGTCTGTAATACTT +
Preference number: 5 (lower is better)
Translates to: LSPRPPGKAALSAIA*GALTHLVSIQSVIL
Trigger: AAGTATTACAGACTGTATTGACACAAGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAGAGCTGCCTTCCCTGGAGGTCTTGGAGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp CATAGATGTCTATACACGATGATGGTCTTCTGGAATCAGGAACAATaGCCAAGGTGTTGGCAGGGGCTGCAGGAGCTTTGGGTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: HRCLYTMMVFWNQEQ*PRCWQGLQELWVLL
Trigger: CAAAAGAACCCAAAGCTCCTGCAGCCCCTGCCAACACCTTGGCCATTGTTCCTGATTCCAGAAGACCATCATCGTGTATAGACATCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 90 bp AGCTATGAGATTTCACAATGGGAGCCTCTTCTAGAAGAAAGGGTGTaGTGGCTAGGTAGCGGCTACTTTTGGAACGCTCAATGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: SYEISQWEPLLEERV*WLGSGYFWNAQWCG
Trigger: ACCACACCATTGAGCGTTCCAAAAGTAGCCGCTACCTAGCCACCACACCCTTTCTTCTAGAAGAGGCTCCCATTGTGAAATCTCATAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCACCTATGGGGGTCTTaGGTGCTGGGTATGATGTGG +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMHLWGS*VLGMMW
Trigger: CCACATCATACCCAGCACCAAAGACCCCCATAGGTG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTATCCGTAGGGCTGAGTaGAGTGTGTTTGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAIRRAE*SVFADG
Trigger: TCCATCAGCAAACACACTCAACTCAGCCCTACGGAT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATGGAATGGCCACCTCCTaGGAACTCAATGGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDGMATS*ELNGPK
Trigger: TTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCC...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGGAATGGCCACCTCCTaGGAACTCAATGGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: FTAICALLHYHKWTFRSHGMATS*ELNGPK
Trigger: TTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGGAATGGCCACCTCCTaGGAACTCAATGGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRGMATS*ELNGPK
Trigger: TTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCGCACATACATGGCTTaGTTGGAATGGCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDRTYMA*LEWPPP
Trigger: AGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGTCCAACTGCCATTCCTaGGTCATCAGGTGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLSNCHS*VIRCKR
Trigger: CCTCTTACACCTGATGACCAAGGAATGGCAGTTGGA...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGACAGAGATGAGAAGCTaGGGAAGCTCCAACTGCCAT +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWTEMRS*GSSNCH
Trigger: ATGGCAGTTGGAGCTTCCCAAGCTTCTCATCTCTGT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGAGCTTGCTCATGGGATaGGACATGGTCTGGTATGGC +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSLLMG*DMVWYG
Trigger: GCCATACCAGACCATGTCCAATCCCATGAGCAAGCT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATAGCTTGCTCATGGGATaGGACATGGTCTGGTATGGC +
Preference number: 5 (lower is better)
Translates to: FTAICALLHYHKWTFRSHSLLMG*DMVWYG
Trigger: GCCATACCAGACCATGTCCAATCCCATGAGCAAGCT...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTTTGAGAACAGTGAGCTaGCTCATGGGATTGGACATG +
Preference number: 5 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESLRTVS*LMGLDM
Trigger: CATGTCCAATCCCATGAGCAAGCTCACTGTTCTCAA...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTGGGAATGCATGCTGTaGAGAACAGTGAGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAWECML*RTVSLL
Trigger: GAGCAAGCTCACTGTTCTCAACAGCATGCATTCCCA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTTTCCAGTGGTCCCGTaGTCAGCCAGAATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDFPVVP*SARMKW
Trigger: CCACTTCATTCTGGCTGACAACGGGACCACTGGAAA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTTTCCAGTGGTCCCGTaGTCAGCCAGAATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSFPVVP*SARMKW
Trigger: CCACTTCATTCTGGCTGACAACGGGACCACTGGAAA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTCCCACCGGCCACTGTaGCCCGTAAATAAAGATCTG +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSHRPL*PVNKDL
Trigger: CAGATCTTTATTTACGGGCAACAGTGGCCGGTGGGA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTGGCATCCAACATGGCTaGCTCCAGAGATCCCACCGG +
Preference number: 5 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSGIQHG*LQRSHR
Trigger: CCGGTGGGATCTCTGGAGCAAGCCATGTTGGATGCC...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGAGTGCTCTCTCTCGTaGACTTCCTCCAGCCGCATA +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGECSLS*TSSSRI
Trigger: TATGCGGCTGGAGGAAGTCAACGAGAGAGAGCACTC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGGGTCTATACTCTCTaGGAGCTTGAAGGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLRVYTL*ELEGVP
Trigger: GGGAACACCTTCAAGCTCCAAGAGAGTATAGACCCT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTAAGGTTGGAGAAGTaGGGGACATGGTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLRLEK*GTWSPH
Trigger: GTGAGGAGACCATGTCCCCAACTTCTCCAACCTTAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTGGAAGGTACTGGAGTaGAAAAGCTTGGCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDWKVLE*KSLARP
Trigger: TGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCCA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTGGAAGGTACTGGAGTaGAAAAGCTTGGCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSWKVLE*KSLARP
Trigger: TGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCCA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCTGTGGGTGCAAGTGTaGCATAGGCACTACTTGAAG +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERALWVQV*HRHYLK
Trigger: CTTCAAGTAGTGCCTATGCAACACTTGCACCCACAG...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCTGTCCGCAATTGCTaGAGGGGCATTGACACACCT +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSVRNC*RGIDTP
Trigger: AGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGTGGCTCTGCGGCCTTaGGCCTCATTCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIVALRP*ASFSSL
Trigger: CAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCAC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCTTGGCGCGCTCTATCTaGGGAACAGTGATGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLLARSI*GTVMLL
Trigger: CAACAACATCACTGTTCCCAAGATAGAGCGCGCCAA...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGTGCATATGGCGCACTaGGCTCCTCTGCCGAGTAGC +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIVHMAH*APLPSS
Trigger: GCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCAC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCCGGCTTGGAGGACTaGCTTCTCTGGAAGGGATTT +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSGLED*LLWKGF
Trigger: AAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTCCGGCTTGGAGGACTaGCTTCTCTGGAAGGGATTT +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSGLED*LLWKGF
Trigger: AAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCCCTCGGCCCTCCGGCTaGGAGGACTTGCTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFPRPSG*EDLLLW
Trigger: CCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGG...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTACTAGTCAAGTAGCCTaGCCTGAGCCCCTGAACCTT +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSTSQVA*PEPLNL
Trigger: AAGGTTCAGGGGCTCAGGCAAGGCTACTTGACTAGT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAGAGTGGTGTGAAAAATaGGCAGTTACGTCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQEWCEK*AVTSWR
Trigger: CCTCCAAGACGTAACTGCCAATTTTTCACACCACTC...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACCAGACCCAAGAGGTGTaGGCTTGCCACCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYQTQEV*ACHLWV
Trigger: GACCCAGAGGTGGCAAGCCAACACCTCTTGGGTCTG...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATCTCCGGCTTAGCAATTaGCACCCAGTAGCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: FTAICALLHYHKWTFRSHLRLSN*HPVALK
Trigger: CTTCAGAGCTACTGGGTGCAAATTGCTAAGCCGGAG...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATTCCAGCACACAAACATaGTGCAAACGCACAAGGGCC +
Preference number: 5 (lower is better)
Translates to: FTAICALLHYHKWTFRSHSSTQT*CKRTRA
Trigger: GGCCCTTGTGCGTTTGCACAATGTTTGTGTGCTGGA...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATGGCCCCTCCATGTGTTaGAATTTGCAGCCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: FTAICALLHYHKWTFRSHGPSMC*NLQPLS
Trigger: ACTGAGAGGCTGCAAATTCAAACACATGGAGGGGCC...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACCCAAACTATTGCCTTaGGGACTGAATGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKPKLLP*GLNAAG
Trigger: GCCAGCAGCATTCAGTCCCAAAGGCAATAGTTTGGG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATGGTTCTCAGTGTATTTaGTGTGTACACTCACCAAGT +
Preference number: 5 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHGSQCI*CVHSPS
Trigger: ACTTGGTGAGTGTACACACAAAATACACTGAGAACC...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTGACAGCAGGAAGTGCTaGGAGAACAGTGGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSDSRKC*ENSGED
Trigger: GTCCTCCCCACTGTTCTCCAAGCACTTCCTGCTGTC...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS TCA 90 bp CCTCCTTGGAACTCAATGGTCCCAAAAGCATCCGTAGGGCTGAGTTaGGTGTGTTTGCTGATGGACCACTTTTCAGACTGGATGTCATTT +
Preference number: 5 (lower is better)
Translates to: PPWNSMVPKASVGLS*VCLLMDHFSDWMSF
Trigger: AAATGACATCCAGTCTGAAAAGTGGTCCATCAGCAAACACACTCAACTCAGCCCTACGGATGCTTTTGGGACCATTGAGTTCCAAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377097.3
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000437699.3
ENST00000677594.1
ENST00000677713.2
CDS TCA 90 bp ACAGTGGAGCTCATCCATAGCAGAGACATAGATGTCTATACACGATaGTGGTCTTCTGGAATCAGGAACAATGGCCAAGGTGTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: TVELIHSRDIDVYTR*WSSGIRNNGQGVGR
Trigger: CCTGCCAACACCTTGGCCATTGTTCCTGATTCCAGAAGACCATCATCGTGTATAGACATCTATGTCTCTGCTATGGATGAGCTCCACTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS TCA 90 bp CCAGGATTTCTGAGCCAGCATTTGCAATGGCAGCGGAGTCTCCCATaGAATTCAATGAGCTGCTCAGAGGATTCCTTCTCTAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: PGFLSQHLQWQRSLP*NSMSCSEDSFSKPL
Trigger: TAAAGGCTTAGAGAAGGAATCCTCTGAGCAGCTCATTGAATTTCATGGGAGACTCCGCTGCCATTGCAAATGCTGGCTCAGAAATCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437699.3
CDS CCA 90 bp TATGAGATTTCACAATGGGAGCCTCTTCTAGAAGAAAGGGTGTGGTaGCTAGGTAGCGGCTACTTTTGGAACGCTCAATGGTGTGGTACA +
Preference number: 5 (lower is better)
Translates to: YEISQWEPLLEERVW*LGSGYFWNAQWCGT
Trigger: TGTACCACACCATTGAGCGTTCCAAAAGTAGCCGCTACCTAGCCACCACACCCTTTCTTCTAGAAGAGGCTCCCATTGTGAAATCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTATCCGTAGGGCTGAGTaGAGTGTGTTTGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSIRRAE*SVFADG
Trigger: TCCATCAGCAAACACACTCAACTCAGCCCTACGGAT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGACATACATGGCTTTGTaGGAATGGCCACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRTYMAL*EWPPPW
Trigger: CCAAGGAGGTGGCCATTCCAACAAAGCCATGTATGT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATACATACATGGCTTTGTaGGAATGGCCACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDTYMAL*EWPPPW
Trigger: CCAAGGAGGTGGCCATTCCAACAAAGCCATGTATGT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAGAGGAGATCAGGTTTaGTATCAAAAGATACTCGCA +
Preference number: 5 (lower is better)
Translates to: STHTLVSKQALGFFHGAWRGDQV*YQKILA
Trigger: TGCGAGTATCTTTTGATACAAAACCTGATCTCCTCT...CCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTCCAACTGCCATTCCTaGGTCATCAGGTGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSSNCHS*VIRCKR
Trigger: CCTCTTACACCTGATGACCAAGGAATGGCAGTTGGA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCCAACTGCCATTCCTaGGTCATCAGGTGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSNCHS*VIRCKR
Trigger: CCTCTTACACCTGATGACCAAGGAATGGCAGTTGGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTGGAAAGTTTCCCAAAGACTTGCTaGAGTTTTGGCTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SYPRFQTGFRVLPWGLESFPKTC*SFGWSS
Trigger: TGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGAA...ACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGGTTGTCATTGCTGCTTaGATGAGCCCTTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLVVIAA*MSPFPK
Trigger: CTTTGGGAAAGGGCTCATCAAAGCAGCAATGACAAC...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCTTGAGAACAGTGAGCTaGCTCATGGGATTGGACATG +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLLRTVS*LMGLDM
Trigger: CATGTCCAATCCCATGAGCAAGCTCACTGTTCTCAA...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTGAGAACAGTGAGCTaGCTCATGGGATTGGACATG +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLRTVS*LMGLDM
Trigger: CATGTCCAATCCCATGAGCAAGCTCACTGTTCTCAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATGGGAATGCATGCTGTaGAGAACAGTGAGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKWECML*RTVSLL
Trigger: GAGCAAGCTCACTGTTCTCAACAGCATGCATTCCCA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCACAATCGAGATCACATaGGGTCCTCCTTCCACTATG +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLTIEIT*GPPSTM
Trigger: CATAGTGGAAGGAGGACCCAATGTGATCTCGATTGT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTGAGGCATTGGCTCCTTaGAGTAAAGCTGTCAGGATA +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAEALAP*SKAVRI
Trigger: TATCCTGACAGCTTTACTCAAAGGAGCCAATGCCTC...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGGCCCATGTCTCGTATaGTACAATTCCTCTAGTCTG +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLGPCLV*YNSSSL
Trigger: CAGACTAGAGGAATTGTACAATACGAGACATGGGCC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAATTCCCAGAATTACCTaGAGGCCTGAGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKIPRIT*RPEFLR
Trigger: GCGCAAGAACTCAGGCCTCAAGGTAATTCTGGGAAT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTACGGGCCCAAATACTaGTTCACGCCGAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSYGPKY*FTPKMS
Trigger: AGACATCTTCGGCGTGAACAAGTATTTGGGCCCGTA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTACGGGCCCAAATACTaGTTCACGCCGAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSYGPKY*FTPKMS
Trigger: AGACATCTTCGGCGTGAACAAGTATTTGGGCCCGTA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTACGGGCCCAAATACTaGTTCACGCCGAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: EHALNPLCLALGQIKCFLYGPKY*FTPKMS
Trigger: AGACATCTTCGGCGTGAACAAGTATTTGGGCCCGTA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGTGGTGGAGCCATGCAAATGATGACGGTCACACAGCAGCACAACACACGACATCTGAAACTTCCAGACTaGGTTGGATATCGATTTTAC +
Preference number: 5 (lower is better)
Translates to: RGGAMQMMTVTQQHNTRHLKLPD*VGYRFY
Trigger: GTAAAATCGATATCCAACCAAGTCTGGAAGTTTCAG...ATGTCGTGTGTTGTGCTGCTGTGTGACCGTCATCATTTGCATGGCTCCACCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCTGAAACTTCCAGACTaGGTTGGATATCGATTTTAC +
Preference number: 5 (lower is better)
Translates to: VRNQQMPPGMERARSPLFLKLPD*VGYRFY
Trigger: GTAAAATCGATATCCAACCAAGTCTGGAAGTTTCAG...AAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTCTCGAGCGGATTTTGTaGGACTCGGCCCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVLERIL*DSARSR
Trigger: TCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGAG...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTAGGGTCTATACTCTCTaGGAGCTTGAAGGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: EHALNPLCLALGQIKCFLRVYTL*ELEGVP
Trigger: GGGAACACCTTCAAGCTCCAAGAGAGTATAGACCCT...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTTAAGGTTGGAGAAGTaGGGGACATGGTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSLRLEK*GTWSPH
Trigger: GTGAGGAGACCATGTCCCCAACTTCTCCAACCTTAA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGGGGCTGCAGGAGCTTaGGGTTCTTTTGCTACAGAG +
Preference number: 5 (lower is better)
Translates to: TIKNLILLALNQRSQTIAGAAGA*GSFATE
Trigger: CTCTGTAGCAAAAGAACCCAAAGCTCCTGCAGCCCC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTCTGGAGTTGAAAAGCTaGGCTCGCCCAGCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMILELKS*ARPAQG
Trigger: TCCTTGGGCTGGGCGAGCCAAGCTTTTCAACTCCAG...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTGCATAGGCACTACTaGAAGGGGCTGTGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRLHRHY*KGLWKV
Trigger: TACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTTGCATAGGCACTACTaGAAGGGGCTGTGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSLHRHY*KGLWKV
Trigger: TACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTTGCATAGGCACTACTaGAAGGGGCTGTGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSLHRHY*KGLWKV
Trigger: TACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGGAACAGTGATGTTGTaGGACAGGGTTCTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSGTVML*DRVLSE
Trigger: CTCAGAGAGAACCCTGTCCAACAACATCACTGTTCC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTGGGAACAGTGATGTaGTTGGACAGGGTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLGTVM*LDRVLS
Trigger: AGAGAGAACCCTGTCCAACAACATCACTGTTCCCAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATTGGCGCGCTCTATCTaGGGAACAGTGATGTTGTTG +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKLARSI*GTVMLL
Trigger: CAACAACATCACTGTTCCCAAGATAGAGCGCGCCAA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTTGGCGCGCTCTATCTaGGGAACAGTGATGTTGTTG +
Preference number: 5 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLARSI*GTVMLL
Trigger: CAACAACATCACTGTTCCCAAGATAGAGCGCGCCAA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTAGGGATTTCGCAGGCTaGCTGTGTTCCGCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIRDFAG*LCSAAC
Trigger: ACAGGCAGCGGAACACAGCAAGCCTGCGAAATCCCT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTCGAAGCCCCTTGTTTCCGCCAGGAACAATAGATaGTTTTCCTTAAAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: QKSTDASWHGACSKPLVSARNNR*FSLKAL
Trigger: TAAAGCCTTTAAGGAAAACAATCTATTGTTCCTGGC...GGAAACAAGGGGCTTCGAGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTCCAAGAGGTGTTGGCTaGCCACCTCTGGGTCCCATG +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVPRGVG*PPLGPM
Trigger: CATGGGACCCAGAGGTGGCAAGCCAACACCTCTTGG...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAACAAAGTCTAAATGTTaGCCTTTTTCCAAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQTKSKC*PFSKRP
Trigger: CGGCCGCTTGGAAAAAGGCAAACATTTAGACTTTGT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGTCCAGTTCACACATTaGTGTTTTCTGGATCCGGCC +
Preference number: 5 (lower is better)
Translates to: RLILNKEDALHQSPVMEPVQFTH*CFLDPA
Trigger: GGCCGGATCCAGAAAACACAAATGTGTGAACTGGAC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCATTTGGAAAGCTGAATTaGAAGGTGTTTGTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPFGKLN*KVFVVG
Trigger: TCCCACCACAAACACCTTCAAATTCAGCTTTCCAAA...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS GCA 90 bp CTCCAAAACAATCGAGATCACATTGGGTCCTCCTTCCACTATGAGTaGCACCACAGGAACACCTTGACCGATTCTTGTGTTTATCTTCTG +
Preference number: 5 (lower is better)
Translates to: LQNNRDHIGSSFHYE*HHRNTLTDSCVYLL
Trigger: CAGAAGATAAACACAAGAATCGGTCAAGGTGTTCCTGTGGTGGCACTCATAGTGGAAGGAGGACCCAATGTGATCTCGATTGTTTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000357533.6
ENST00000361823.9
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCCAACTGCCATTCCTaGGTCATCAGGTGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSNCHS*VIRCKR
Trigger: CCTCTTACACCTGATGACCAAGGAATGGCAGTTGGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGGTTGTCATTGCTGCTTaGATGAGCCCTTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRVVIAA*MSPFPK
Trigger: CTTTGGGAAAGGGCTCATCAAAGCAGCAATGACAAC...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATTTGAGAACAGTGAGCTaGCTCATGGGATTGGACATG +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLRTVS*LMGLDM
Trigger: CATGTCCAATCCCATGAGCAAGCTCACTGTTCTCAA...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AATGAGCCGGGTTTCCTCATCTGTAAGATGAGGGTAATAATTGTACCTCTCTCATTTCCAGTGGTCCCGTaGTCAGCCAGAATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: NEPGFLICKMRVIIVPLSFPVVP*SARMKW
Trigger: CCACTTCATTCTGGCTGACAACGGGACCACTGGAAA...TGAGAGAGGTACAATTATTACCCTCATCTTACAGATGAGGAAACCCGGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCCACCTTGACCGATTCTaGTGTTTATCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLHLDRF*CLSSGV
Trigger: CACTCCAGAAGATAAACACAAGAATCGGTCAAGGTG...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAACAATCGAGATCACATaGGGTCCTCCTTCCACTATG +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKTIEIT*GPPSTM
Trigger: CATAGTGGAAGGAGGACCCAATGTGATCTCGATTGT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGCATTGGCTCCTTaGAGTAAAGCTGTCAGGATA +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKEALAP*SKAVRI
Trigger: TATCCTGACAGCTTTACTCAAAGGAGCCAATGCCTC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCGAGGCATTGGCTCCTTaGAGTAAAGCTGTCAGGATA +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSEALAP*SKAVRI
Trigger: TATCCTGACAGCTTTACTCAAAGGAGCCAATGCCTC...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGGCCCATGTCTCGTATaGTACAATTCCTCTAGTCTG +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKGPCLV*YNSSSL
Trigger: CAGACTAGAGGAATTGTACAATACGAGACATGGGCC...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAATTCCCAGAATTACCTaGAGGCCTGAGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGIPRIT*RPEFLR
Trigger: GCGCAAGAACTCAGGCCTCAAGGTAATTCTGGGAAT...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GTGAAAAATTGGCAGTTACGTCTTGGAGGTGTTCAGGAGGACGTGGTGGAGCCAATGTCGTCTTTGTTCTaGAACTCCAAGCTGAGAATT +
Preference number: 5 (lower is better)
Translates to: VKNWQLRLGGVQEDVVEPMSSLF*NSKLRI
Trigger: AATTCTCAGCTTGGAGTTCAAGAACAAAGACGACAT...TGGCTCCACCACGTCCTCCTGAACACCTCCAAGACGTAACTGCCAATTTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTTCTGCCTCCTTCTCTaGGAGGTGGATTTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIFCLLL*EVDFLG
Trigger: GCCCAGGAAATCCACCTCCAAGAGAAGGAGGCAGAA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCTTCCTCTTTTTCCTTaGTGGGCTTCTCTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWLPLFP*WASLVL
Trigger: AAGAACCAGAGAAGCCCACAAAGGAAAAAGAGGAAG...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGACAGCAATGAGGAGGTaGACCAGCAAGATGTTTGCC +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMTAMRR*TSKMFA
Trigger: GGCAAACATCTTGCTGGTCAACCTCCTCATTGCTGT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGATACTCTCTTGGAGCTaGAAGGTGTTCCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMILSWS*KVFPSW
Trigger: CCAGGAAGGGAACACCTTCAAGCTCCAAGAGAGTAT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGAGGGTCTATACTCTCTaGGAGCTTGAAGGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMRVYTL*ELEGVP
Trigger: GGGAACACCTTCAAGCTCCAAGAGAGTATAGACCCT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGGATGTTCACGGAATaGTCCAGAGGGTCTATATCA +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLRMFTE*SRGSIS
Trigger: TGATATAGACCCTCTGGACAATTCCGTGAACATCCT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACTGTGGGTGCAAGTGTaGCATAGGCACTACTTGAAG +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGLWVQV*HRHYLK
Trigger: CTTCAAGTAGTGCCTATGCAACACTTGCACCCACAG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTTGGGAACAGTGATGTaGTTGGACAGGGTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLGTVM*LDRVLS
Trigger: AGAGAGAACCCTGTCCAACAACATCACTGTTCCCAA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTAAAACGGCAGGCATCTaGTGTTTATCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAKTAGI*CLSSGV
Trigger: CACTCCAGAAGATAAACACAAGATGCCTGCCGTTTT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360823.6
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGAGATCAAATGCTTTCTaGATCTGTGGCCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWRSNAF*ICGPEV
Trigger: GACTTCTGGGCCACAGATCAAGAAAGCATTTGATCT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGAGATCAAATGCTTTCTaGATCTGTGGCCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLRSNAF*ICGPEV
Trigger: GACTTCTGGGCCACAGATCAAGAAAGCATTTGATCT...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTAGGCAGTCAGAGCGTTaGGATGAGCTCCAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: DQAEAFSRRGPILSLQLIRQSER*DELQKE
Trigger: TTCCTTTTGGAGCTCATCCAAACGCTCTGACTGCCT...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAACTGATGGCTTTGGGTaGATACCAAACTCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: RLILNKEDALHQSPVMEPTDGFG*IPNSQS
Trigger: TGACTGGGAGTTTGGTATCAACCCAAAGCCATCAGT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCCCAGAATGAGGCCTaGGAGGTGTTTGATGTCAAT +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGAQNEA*EVFDVN
Trigger: ATTGACATCAAACACCTCCAAGGCCTCATTCTGGGC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAAGAATCAATGCCACATaGCTGCACAGAGAACCCAGA +
Preference number: 5 (lower is better)
Translates to: RLILNKEDALHQSPVMEPRINAT*LHREPR
Trigger: TCTGGGTTCTCTGTGCAGCAATGTGGCATTGATTCT...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATAGAGGTCCCAAACTATaGCCTTTGGGACTGAATGCT +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDRGPKL*PLGLNA
Trigger: AGCATTCAGTCCCAAAGGCAATAGTTTGGGACCTCT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTAGAGGTCCCAAACTATaGCCTTTGGGACTGAATGCT +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSRGPKL*PLGLNA
Trigger: AGCATTCAGTCCCAAAGGCAATAGTTTGGGACCTCT...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS GCA 90 bp ACCAGAACTTCACGATGGGTGCATTGTAGAATTCATAGATTTTTCTaGCGAGGGGGATTAACCGGTGCTTGCTCTGAACTTCCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: TRTSRWVHCRIHRFF*RGGLTGACSELPLH
Trigger: ATGAAGAGGAAGTTCAGAGCAAGCACCGGTTAATCCCCCTCGGCAGAAAAATCTATGAATTCTACAATGCACCCATCGTGAAGTTCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS-3UTR CAA 90 bp AAAGCACCTCAGTGGTTCATGACTTCCAAGCAAAATGAAATCCGAAACCTAAGAGGAATGGCCACCTCCTaGGAACTCAATGGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: KAPQWFMTSKQNEIRNLRGMATS*ELNGPK
Trigger: TTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCC...TCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp AGTAAGCAGAGAACAAAATCACATGATTTTGTTCACCCTAGCAGGGTCTCTGATCGCACATACATGGCTTaGTTGGAATGGCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: SKQRTKSHDFVHPSRVSDRTYMA*LEWPPP
Trigger: AGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCG...ATCAGAGACCCTGCTAGGGTGAACAAAATCATGTGATTTTGTTCTCTGCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAATTCCCAAAGACTTGCTaGAGTTTTGGCTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKFPKTC*SFGWSS
Trigger: TGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGAA...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGTTGTCATTGCTGCTTaGATGAGCCCTTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMVVIAA*MSPFPK
Trigger: CTTTGGGAAAGGGCTCATCAAAGCAGCAATGACAAC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTAGCTTGCTCATGGGATaGGACATGGTCTGGTATGGC +
Preference number: 5 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLSLLMG*DMVWYG
Trigger: GCCATACCAGACCATGTCCAATCCCATGAGCAAGCT...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATAGCTTGCTCATGGGATaGGACATGGTCTGGTATGGC +
Preference number: 5 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHSLLMG*DMVWYG
Trigger: GCCATACCAGACCATGTCCAATCCCATGAGCAAGCT...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGATTTCCAGTGGTCCCGTaGTCAGCCAGAATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGFPVVP*SARMKW
Trigger: CCACTTCATTCTGGCTGACAACGGGACCACTGGAAA...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGCACCTTGACCGATTCTaGTGTTTATCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRHLDRF*CLSSGV
Trigger: CACTCCAGAAGATAAACACAAGAATCGGTCAAGGTG...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAACACCACAGGAACACCTaGACCGATTCTTGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKHHRNT*TDSCVY
Trigger: ATAAACACAAGAATCGGTCAAGGTGTTCCTGTGGTG...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCACCACAGGAACACCTaGACCGATTCTTGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSHHRNT*TDSCVY
Trigger: ATAAACACAAGAATCGGTCAAGGTGTTCCTGTGGTG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTACAATCGAGATCACATaGGGTCCTCCTTCCACTATG +
Preference number: 5 (lower is better)
Translates to: DQAEAFSRRGPILSLQLITIEIT*GPPSTM
Trigger: CATAGTGGAAGGAGGACCCAATGTGATCTCGATTGT...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACTCCCACCGGCCACTGTaGCCCGTAAATAAAGATCTG +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYSHRPL*PVNKDL
Trigger: CAGATCTTTATTTACGGGCAACAGTGGCCGGTGGGA...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGAGTGGTACAATGTATTaGAGGGCCCATGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSGTMY*RAHVSY
Trigger: ATACGAGACATGGGCCCTCAAATACATTGTACCACT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAAGTGGTACAATGTATTaGAGGGCCCATGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKSGTMY*RAHVSY
Trigger: ATACGAGACATGGGCCCTCAAATACATTGTACCACT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAATGTCGTCTTTGTTCTaGAACTCCAAGCTGAGAATT +
Preference number: 5 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQMSSLF*NSKLRI
Trigger: AATTCTCAGCTTGGAGTTCAAGAACAAAGACGACAT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AATGTTTGCCTTTTTCCAAGCGGCCGCTGTTTCAGCTTACTGTGCGAGGGTCAAAAGTCATGTACTTTCTaGAGCTCATCATCGGTTATG +
Preference number: 5 (lower is better)
Translates to: NVCLFPSGRCFSLLCEGQKSCTF*SSSSVM
Trigger: CATAACCGATGATGAGCTCAAGAAAGTACATGACTT...TTGACCCTCGCACAGTAAGCTGAAACAGCGGCCGCTTGGAAAAAGGCAAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCAGGGTCTATACTCTCTaGGAGCTTGAAGGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: TIKNLILLALNQRSQTIARVYTL*ELEGVP
Trigger: GGGAACACCTTCAAGCTCCAAGAGAGTATAGACCCT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTGGAAGGTACTGGAGTaGAAAAGCTTGGCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIWKVLE*KSLARP
Trigger: TGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCCA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTTCTGTCCGCAATTGCTaGAGGGGCATTGACACACCT +
Preference number: 5 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSSVRNC*RGIDTP
Trigger: AGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAGA...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTCCGGCTTGGAGGACTaGCTTCTCTGGAAGGGATTT +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMISGLED*LLWKGF
Trigger: AAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATCTTGCTTTCAAAGCTTaGGAAAGCCGATGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDLAFKA*ESRCSG
Trigger: TCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCAAG...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGCTCCCAAAGCATTGCTaGTTTTGCTCAGCTAAGAAT +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLLPKHC*FCSAKN
Trigger: ATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAG...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTAGGGGATGCACGATTTaGAAGAAGAGGGACAGCCTG +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIRGCTI*KKRDSL
Trigger: CAGGCTGTCCCTCTTCTTCAAAATCGTGCATCCCCT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTATTGGCAGTTACGTCTaGGAGGTGTTCAGGAGGACG +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIIGSYV*EVFRRT
Trigger: CGTCCTCCTGAACACCTCCAAGACGTAACTGCCAAT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAACTGATGGCTTTGGGTaGATACCAAACTCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGTDGFG*IPNSQS
Trigger: TGACTGGGAGTTTGGTATCAACCCAAAGCCATCAGT...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGATCTGATATTCATGGTATGCTaGCAACTGATGGCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: ALNPLCLALGQIKCFLDLIFMVC*QLMALG
Trigger: ACCCAAAGCCATCAGTTGCAAGCATACCATGAATAT...CAGATCAAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTGCAAGATCAGGACTGTaGAGTATTTCGTTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: EHALNPLCLALGQIKCFLARSGL*SISFPS
Trigger: ACTGGGAAACGAAATACTCAACAGTCCTGATCTTGC...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTCTCCGGCTTAGCAATTaGCACCCAGTAGCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSLRLSN*HPVALK
Trigger: CTTCAGAGCTACTGGGTGCAAATTGCTAAGCCGGAG...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGAAGGAGGGAGGTCTCTaGTCATATCATTGGATCACA +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRKEGGL*SYHWIT
Trigger: TGTGATCCAATGATATGACAAGAGACCTCCCTCCTT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGTTCACCTCATTCTTATaGCCATCTGGATTACCTGGT +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWFTSFL*PSGLPG
Trigger: ACCAGGTAATCCAGATGGCAATAAGAATGAGGTGAA...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGACAAAGTCTAAATGTTaGCCTTTTTCCAAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRTKSKC*PFSKRP
Trigger: CGGCCGCTTGGAAAAAGGCAAACATTTAGACTTTGT...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTTAGAGAGGCAAAAATaGGACGAGGTCAATGTGAAC +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERALERQK*DEVNVN
Trigger: GTTCACATTGACCTCGTCCAATTTTTGCCTCTCTAA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGGCAGACATGTTTGTTaGGCTAGGACAGTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGGRHVC*ARTVFG
Trigger: TCCAAACACTGTCCTAGCCAAACAAACATGTCTGCC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAGGATGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAAAGAATCTGATCCTGTaGGCTCTAAATCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: EGCGTLGRTACCRLILNKKNLIL*ALNQRS
Trigger: GGACCTCTGATTTAGAGCCAACAGGATCAGATTCTT...TTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACATCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS GCA 90 bp TTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTTAGTTGTGCTTaGTTTCAAAGCTTTGGAAAGCCGATGTTCTGGACAGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: FLSLLWRILRRFSCA*FQSFGKPMFWTVSS
Trigger: TGAGGAGACTGTCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCAAGCACAACTAAACCTTCTTAATATCCGCCACAGAAGGCTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS CCA 90 bp TTGGCTCCTTTGAGTAAAGCTGTCAGGATAGCCAAATCAATGTCCTaGTGTCCTTCTGATCCCATCCGAAATACCGTAATCAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: LAPLSKAVRIAKSMS*CPSDPIRNTVINSF
Trigger: GAAGGAATTGATTACGGTATTTCGGATGGGATCAGAAGGACACCAGGACATTGATTTGGCTATCCTGACAGCTTTACTCAAAGGAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTATCCGTAGGGCTGAGTaGAGTGTGTTTGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIIRRAE*SVFADG
Trigger: TCCATCAGCAAACACACTCAACTCAGCCCTACGGAT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGAACATACATGGCTTTGTaGGAATGGCCACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGTYMAL*EWPPPW
Trigger: CCAAGGAGGTGGCCATTCCAACAAAGCCATGTATGT...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACACATACATGGCTTTGTaGGAATGGCCACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYTYMAL*EWPPPW
Trigger: CCAAGGAGGTGGCCATTCCAACAAAGCCATGTATGT...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGAGAGGAGATCAGGTTTaGTATCAAAAGATACTCGCA +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWRGDQV*YQKILA
Trigger: TGCGAGTATCTTTTGATACAAAACCTGATCTCCTCT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGAGGAGATCAGGTTTaGTATCAAAAGATACTCGCA +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLRGDQV*YQKILA
Trigger: TGCGAGTATCTTTTGATACAAAACCTGATCTCCTCT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGATCCAACTGCCATTCCTaGGTCATCAGGTGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGSNCHS*VIRCKR
Trigger: CCTCTTACACCTGATGACCAAGGAATGGCAGTTGGA...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTACAGAGATGAGAAGCTaGGGAAGCTCCAACTGCCAT +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMITEMRS*GSSNCH
Trigger: ATGGCAGTTGGAGCTTCCCAAGCTTCTCATCTCTGT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTACAGAGATGAGAAGCTaGGGAAGCTCCAACTGCCAT +
Preference number: 5 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSTEMRS*GSSNCH
Trigger: ATGGCAGTTGGAGCTTCCCAAGCTTCTCATCTCTGT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACACAGAGATGAGAAGCTaGGGAAGCTCCAACTGCCAT +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYTEMRS*GSSNCH
Trigger: ATGGCAGTTGGAGCTTCCCAAGCTTCTCATCTCTGT...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTTCCCAAAGACTTGCTaGAGTTTTGGCTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMFPKTC*SFGWSS
Trigger: TGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGAA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATTCCCAAAGACTTGCTaGAGTTTTGGCTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGFPKTC*SFGWSS
Trigger: TGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGAA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAAGCTTGCTCATGGGATaGGACATGGTCTGGTATGGC +
Preference number: 5 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQSLLMG*DMVWYG
Trigger: GCCATACCAGACCATGTCCAATCCCATGAGCAAGCT...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp TACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGCCCTCTTTGAGAACAGTGAGCTaGCTCATGGGATTGGACATG +
Preference number: 5 (lower is better)
Translates to: YISSTRSSCIAIYFHKPSLRTVS*LMGLDM
Trigger: CATGTCCAATCCCATGAGCAAGCTCACTGTTCTCAA...AGAGGGCTTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp CCTCACCCTTTTTATTATCCGTGTAGCTTTCATAGAATTTCCCACTTCACAGGATGGGAATGCATGCTGTaGAGAACAGTGAGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: PHPFYYPCSFHRISHFTGWECML*RTVSLL
Trigger: GAGCAAGCTCACTGTTCTCAACAGCATGCATTCCCA...TCCTGTGAAGTGGGAAATTCTATGAAAGCTACACGGATAATAAAAAGGGTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp AAAGCACCTCAGTGGTTCATGACTTCCAAGCAAAATGAAATCCGAAACCTAAGATGGGAATGCATGCTGTaGAGAACAGTGAGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: KAPQWFMTSKQNEIRNLRWECML*RTVSLL
Trigger: GAGCAAGCTCACTGTTCTCAACAGCATGCATTCCCA...TCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACACCACAGGAACACCTaGACCGATTCTTGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGHHRNT*TDSCVY
Trigger: ATAAACACAAGAATCGGTCAAGGTGTTCCTGTGGTG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCACAATCGAGATCACATaGGGTCCTCCTTCCACTATG +
Preference number: 5 (lower is better)
Translates to: TIKNLILLALNQRSQTIATIEIT*GPPSTM
Trigger: CATAGTGGAAGGAGGACCCAATGTGATCTCGATTGT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAAGTGGTACAATGTATTaGAGGGCCCATGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSGTMY*RAHVSY
Trigger: ATACGAGACATGGGCCCTCAAATACATTGTACCACT...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCATGTCGTCTTTGTTCTaGAACTCCAAGCTGAGAATT +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLMSSLF*NSKLRI
Trigger: AATTCTCAGCTTGGAGTTCAAGAACAAAGACGACAT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GCCCTGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGATGTCGTCTTTGTTCTaGAACTCCAAGCTGAGAATT +
Preference number: 5 (lower is better)
Translates to: ALHPTTLDNGQKSTDASWMSSLF*NSKLRI
Trigger: AATTCTCAGCTTGGAGTTCAAGAACAAAGACGACAT...CCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCTTCCTCTTTTTCCTTaGTGGGCTTCTCTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMLPLFP*WASLVL
Trigger: AAGAACCAGAGAAGCCCACAAAGGAAAAAGAGGAAG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACTACGGGCCCAAATACTaGTTCACGCCGAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYYGPKY*FTPKMS
Trigger: AGACATCTTCGGCGTGAACAAGTATTTGGGCCCGTA...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTACAGCAATGAGGAGGTaGACCAGCAAGATGTTTGCC +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMITAMRR*TSKMFA
Trigger: GGCAAACATCTTGCTGGTCAACCTCCTCATTGCTGT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTAAGTCATGTACTTTCTaGAGCTCATCATCGGTTATG +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERAKSCTF*SSSSVM
Trigger: CATAACCGATGATGAGCTCAAGAAAGTACATGACTT...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACATACTCTCTTGGAGCTaGAAGGTGTTCCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYILSWS*KVFPSW
Trigger: CCAGGAAGGGAACACCTTCAAGCTCCAAGAGAGTAT...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACTTAAGGTTGGAGAAGTaGGGGACATGGTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYLRLEK*GTWSPH
Trigger: GTGAGGAGACCATGTCCCCAACTTCTCCAACCTTAA...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTCTGTGGGTGCAAGTGTaGCATAGGCACTACTTGAAG +
Preference number: 5 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSLWVQV*HRHYLK
Trigger: CTTCAAGTAGTGCCTATGCAACACTTGCACCCACAG...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCTTGCTTTCAAAGCTTaGGAAAGCCGATGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMLAFKA*ESRCSG
Trigger: TCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCAAG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTCTCCCAAAGCATTGCTaGTTTTGCTCAGCTAAGAAT +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSLPKHC*FCSAKN
Trigger: ATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAG...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGACGGTCCTCAGTAACTaGCTGCTCATAAACTGCTTA +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMTVLSN*LLINCL
Trigger: TAAGCAGTTTATGAGCAGCAAGTTACTGAGGACCGT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCGTGCTTCAAAACTGTGCAAATaGGCTCCTCTCTTTAACAGA +
Preference number: 5 (lower is better)
Translates to: QLLIMVRNQQMPPGMERASKLCK*APLFNR
Trigger: TCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGA...AGCACGCTCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTTAGAGAGGCAAAAATaGGACGAGGTCAATGTGAAC +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSLERQK*DEVNVN
Trigger: GTTCACATTGACCTCGTCCAATTTTTGCCTCTCTAA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCCATGTGTTTGAATTaGCAGCCTCTCAGTCTATGT +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSMCLN*QPLSLC
Trigger: ACATAGACTGAGAGGCTGCAAATTCAAACACATGGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTCCATGTGTTTGAATTaGCAGCCTCTCAGTCTATGT +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRSMCLN*QPLSLC
Trigger: ACATAGACTGAGAGGCTGCAAATTCAAACACATGGA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGCAAACCCTACTTCTGTaGACTTTCACCAGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMQTLLL*TFTSPV
Trigger: AACTGGACTGGTGAAAGTCAACAGAAGTAGGGTTTG...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTGGCGGATATTAAGAAGGTTTGGAAAGCTGAATTaGAAGGTGTTTGTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: GENFRAGFLSLLWRILRRFGKLN*KVFVVG
Trigger: TCCCACCACAAACACCTTCAAATTCAGCTTTCCAAA...CCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAAAGAATCTGATCCTGTaGGCTCTAAATCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGKNLIL*ALNQRS
Trigger: GGACCTCTGATTTAGAGCCAACAGGATCAGATTCTT...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS TCA 90 bp ACCACTATTAAGTTCAGGGGTAGAACTGCTATAGGAGCTAACTCTTaGCATTCACTACAGCTCATGCACAAATTCCTTACCTTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: TTIKFRGRTAIGANS*HSLQLMHKFLTLGL
Trigger: AAGGCCCAAGGTAAGGAATTTGTGCATGAGCTGTAGTGAATGTCAAGAGTTAGCTCCTATAGCAGTTCTACCCCTGAACTTAATAGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CCA 90 bp TGGGTTCGAGTGTATGTGAAAGTCTTCTGTATAGTCACCAACAGCTaGTCCCTCAAAGATTCATTTATCAGTCCGCCTTCTTCTGAGTAT +
Preference number: 5 (lower is better)
Translates to: WVRVYVKVFCIVTNS*SLKDSFISPPSSEY
Trigger: ATACTCAGAAGAAGGCGGACTGATAAATGAATCTTTGAGGGACCAGCTGTTGGTGACTATACAGAAGACTTTCACATACACTCGAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS-3UTR CAA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGGGAATGGCCACCTCCTaGGAACTCAATGGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLGMATS*ELNGPK
Trigger: TTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCC...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp TGTGGGACGTTAGGTAGAACTGCTTGCTGCCGGCTTATACTGAATAAAGAGGATAGAGGAGATCAGGTTTaGTATCAAAAGATACTCGCA +
Preference number: 5 (lower is better)
Translates to: CGTLGRTACCRLILNKEDRGDQV*YQKILA
Trigger: TGCGAGTATCTTTTGATACAAAACCTGATCTCCTCT...ATCCTCTTTATTCAGTATAAGCCGGCAGCAAGCAGTTCTACCTAACGTCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AAAGCACCTCAGTGGTTCATGACTTCCAAGCAAAATGAAATCCGAAACCTAAGAGTTGTCATTGCTGCTTaGATGAGCCCTTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: KAPQWFMTSKQNEIRNLRVVIAA*MSPFPK
Trigger: CTTTGGGAAAGGGCTCATCAAAGCAGCAATGACAAC...TCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp AAAGCACCTCAGTGGTTCATGACTTCCAAGCAAAATGAAATCCGAAACCTAAGATTGAGAACAGTGAGCTaGCTCATGGGATTGGACATG +
Preference number: 5 (lower is better)
Translates to: KAPQWFMTSKQNEIRNLRLRTVS*LMGLDM
Trigger: CATGTCCAATCCCATGAGCAAGCTCACTGTTCTCAA...TCTTAGGTTTCGGATTTCATTTTGCTTGGAAGTCATGAACCACTGAGGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTTGAGAACAGTGAGCTaGCTCATGGGATTGGACATG +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMILRTVS*LMGLDM
Trigger: CATGTCCAATCCCATGAGCAAGCTCACTGTTCTCAA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTTGGGAATGCATGCTGTaGAGAACAGTGAGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVWECML*RTVSLL
Trigger: GAGCAAGCTCACTGTTCTCAACAGCATGCATTCCCA...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGTTTCCAGTGGTCCCGTaGTCAGCCAGAATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLFPVVP*SARMKW
Trigger: CCACTTCATTCTGGCTGACAACGGGACCACTGGAAA...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTCACCTTGACCGATTCTaGTGTTTATCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSHLDRF*CLSSGV
Trigger: CACTCCAGAAGATAAACACAAGAATCGGTCAAGGTG...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp ACTGAAAACATAATCCACTCATACCCTCGTTTCCAAACAGGCTTTAGGGTTCTTACAATCGAGATCACATaGGGTCCTCCTTCCACTATG +
Preference number: 5 (lower is better)
Translates to: TENIIHSYPRFQTGFRVLTIEIT*GPPSTM
Trigger: CATAGTGGAAGGAGGACCCAATGTGATCTCGATTGT...AAGAACCCTAAAGCCTGTTTGGAAACGAGGGTATGAGTGGATTATGTTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACACAATCGAGATCACATaGGGTCCTCCTTCCACTATG +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYTIEIT*GPPSTM
Trigger: CATAGTGGAAGGAGGACCCAATGTGATCTCGATTGT...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCACTGAAACTTCCAGACTaGGTTGGATATCGATTTTAC +
Preference number: 5 (lower is better)
Translates to: RLILNKEDALHQSPVMEPLKLPD*VGYRFY
Trigger: GTAAAATCGATATCCAACCAAGTCTGGAAGTTTCAG...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCGTATTCTTCTATGCATaGCTCTTCAAAGTCATGTAC +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLVFFYA*LFKVMY
Trigger: GTACATGACTTTGAAGAGCAATGCATAGAAGAATAC...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTTTGCATAGGCACTACTaGAAGGGGCTGTGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVLHRHY*KGLWKV
Trigger: TACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAA...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCTCTGTCCGCAATTGCTaGAGGGGCATTGACACACCT +
Preference number: 5 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFSVRNC*RGIDTP
Trigger: AGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAGA...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTTTGGCGCGCTCTATCTaGGGAACAGTGATGTTGTTG +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVLARSI*GTVMLL
Trigger: CAACAACATCACTGTTCCCAAGATAGAGCGCGCCAA...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GATCAAGCTGAAGCGTTCTCCAGGAGGGGACCAATTTTATCACTTCAACTCATTAACAGCCTGGACCCTTaGTCATTAAAGCTATTTGAC +
Preference number: 5 (lower is better)
Translates to: DQAEAFSRRGPILSLQLINSLDP*SLKLFD
Trigger: GTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTT...AATGAGTTGAAGTGATAAAATTGGTCCCCTCCTGGAGAACGCTTCAGCTTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGATATTCATGGTATGCTaGCAACTGATGGCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMIFMVC*QLMALG
Trigger: ACCCAAAGCCATCAGTTGCAAGCATACCATGAATAT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TTCACAGCGATCTGCGCACTTCTGCACTATCACAAATGGACTTTTCGCTCTCATCTAGCTGGTTTAAAGTaGCGTGTCTATTCAGATTGT +
Preference number: 5 (lower is better)
Translates to: FTAICALLHYHKWTFRSHLAGLK*RVYSDC
Trigger: ACAATCTGAATAGACACGCAACTTTAAACCAGCTAG...ATGAGAGCGAAAAGTCCATTTGTGATAGTGCAGAAGTGCGCAGATCGCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTGCCCAGAATGAGGCCTaGGAGGTGTTTGATGTCAAT +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVAQNEA*EVFDVN
Trigger: ATTGACATCAAACACCTCCAAGGCCTCATTCTGGGC...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTCTGCTAATACACCTTTaGGCTTGCAGAGATAATACA +
Preference number: 5 (lower is better)
Translates to: EHALNPLCLALGQIKCFLLLIHL*ACRDNT
Trigger: TGTATTATCTCTGCAAGCCAAAAGGTGTATTAGCAG...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GGCCCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAATCAGAAATGTGTCTaGCATATATCACAGATGCAC +
Preference number: 5 (lower is better)
Translates to: GPEVTFELTPPKALLVLLNQKCV*HISQMH
Trigger: GTGCATCTGTGATATATGCAAGACACATTTCTGATT...GAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGAGCTGAGAGGAAAGTTTaGTCTACTCATTTTAGGAGC +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGAERKV*STHFRS
Trigger: GCTCCTAAAATGAGTAGACAAAACTTTCCTCTCAGC...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCGAACCAGCCTTTCTTTaGGTTGACTCCAATCTGAGA +
Preference number: 5 (lower is better)
Translates to: TIKNLILLALNQRSQTIAEPAFL*VDSNLR
Trigger: TCTCAGATTGGAGTCAACCAAAAGAAAGGCTGGTTC...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATTCACCTCATTCTTATaGCCATCTGGATTACCTGGT +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGFTSFL*PSGLPG
Trigger: ACCAGGTAATCCAGATGGCAATAAGAATGAGGTGAA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAACAAAGGAATGTGATCTaGACCTGTAGGTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQQRNVI*TCRSGV
Trigger: GACCCCTGACCTACAGGTCAAGATCACATTCCTTTG...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS TCA 90 bp TTAATTATTAATATATTCACTGGAAGAGGAGCCTGTGGGTCTCTATaGAGCCACAAATACAGTCCCAAAAGTAAGTCCCGTGGTACCTGG +
Preference number: 5 (lower is better)
Translates to: LIINIFTGRGACGSL*SHKYSPKSKSRGTW
Trigger: CCAGGTACCACGGGACTTACTTTTGGGACTGTATTTGTGGCTTCATAGAGACCCACAGGCTCCTCTTCCAGTGAATATATTAATAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CCA 90 bp ACTGGAGTTGGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTaGCGGATATTAAGAAGGTTTAGTTGTGCTTGCTTTCAAAGCTTT +
Preference number: 5 (lower is better)
Translates to: TGVGENFRAGFLSLL*RILRRFSCACFQSF
Trigger: AAAGCTTTGAAAGCAAGCACAACTAAACCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCCAACTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGATCCGTAGGGCTGAGTaGAGTGTGTTTGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: ETHFALILDSSRISYVSPIRRAE*SVFADG
Trigger: TCCATCAGCAAACACACTCAACTCAGCCCTACGGAT...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTCCAACTGCCATTCCTaGGTCATCAGGTGTAAGAGG +
Preference number: 5 (lower is better)
Translates to: ETHFALILDSSRISYVSPSNCHS*VIRCKR
Trigger: CCTCTTACACCTGATGACCAAGGAATGGCAGTTGGA...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAGTTGTCATTGCTGCTTaGATGAGCCCTTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQVVIAA*MSPFPK
Trigger: CTTTGGGAAAGGGCTCATCAAAGCAGCAATGACAAC...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCATTCCCAGAATTACCTaGAGGCCTGAGTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFIPRIT*RPEFLR
Trigger: GCGCAAGAACTCAGGCCTCAAGGTAATTCTGGGAAT...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTCTTCCTCTTTTTCCTTaGTGGGCTTCTCTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMILPLFP*WASLVL
Trigger: AAGAACCAGAGAAGCCCACAAAGGAAAAAGAGGAAG...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACTGAAACTTCCAGACTaGGTTGGATATCGATTTTAC +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGLKLPD*VGYRFY
Trigger: GTAAAATCGATATCCAACCAAGTCTGGAAGTTTCAG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGAAGTCATGTACTTTCTaGAGCTCATCATCGGTTATG +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMKSCTF*SSSSVM
Trigger: CATAACCGATGATGAGCTCAAGAAAGTACATGACTT...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CGGCTTATACTGAATAAAGAGGATGCTCTTCATCAGTCACCAGTGATGGAGCCAGTATTCTTCTATGCATaGCTCTTCAAAGTCATGTAC +
Preference number: 5 (lower is better)
Translates to: RLILNKEDALHQSPVMEPVFFYA*LFKVMY
Trigger: GTACATGACTTTGAAGAGCAATGCATAGAAGAATAC...TGGCTCCATCACTGGTGACTGATGAAGAGCATCCTCTTTATTCAGTATAAGCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACATGCCTTAAATCCCCTGTGTCTGGCACTGGGTCAGATCAAATGCTTTCTTTCATCATTAGATGAGTaGAACCGATCATCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: EHALNPLCLALGQIKCFLSSLDE*NRSSFS
Trigger: AGAAAAGGATGATCGGTTCAACTCATCTAATGATGA...AAGAAAGCATTTGATCTGACCCAGTGCCAGACACAGGGGATTTAAGGCATGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTCATCATTAGATGAGTaGAACCGATCATCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSSSLDE*NRSSFS
Trigger: AGAAAAGGATGATCGGTTCAACTCATCTAATGATGA...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTAGGATGTTCACGGAATaGTCCAGAGGGTCTATATCA +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIRMFTE*SRGSIS
Trigger: TGATATAGACCCTCTGGACAATTCCGTGAACATCCT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTCTTGCTTTCAAAGCTTaGGAAAGCCGATGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSLAFKA*ESRCSG
Trigger: TCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCAAG...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTAGATCAAATGCTTTCTaGATCTGTGGCCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIRSNAF*ICGPEV
Trigger: GACTTCTGGGCCACAGATCAAGAAAGCATTTGATCT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATCTTCAACTCATTTTGTaGAGGCAGTCAGAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHLQLIL*RQSERL
Trigger: CAAACGCTCTGACTGCCTCAACAAAATGAGTTGAAG...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp AGTAAGCAGAGAACAAAATCACATGATTTTGTTCACCCTAGCAGGGTCTCTGATTCACTTCAACTCATTTaGTTGAGGCAGTCAGAGCGT +
Preference number: 5 (lower is better)
Translates to: SKQRTKSHDFVHPSRVSDSLQLI*LRQSER
Trigger: ACGCTCTGACTGCCTCAACAAAATGAGTTGAAGTGA...ATCAGAGACCCTGCTAGGGTGAACAAAATCATGTGATTTTGTTCTCTGCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp TGTAACAGCCTGGACCCTTTGTCATTAAAGCTATTTGACAGAAAGCACCTCAGTCAAAATCACATGATTTaGTTCACCCTAGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: CNSLDPLSLKLFDRKHLSQNHMI*FTLAGS
Trigger: AGACCCTGCTAGGGTGAACAAAATCATGTGATTTTG...ACTGAGGTGCTTTCTGTCAAATAGCTTTAATGACAAAGGGTCCAGGCTGTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTAGATCTTGCTCCCTGCTaGGCAGATAGCAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVDLAPC*ADSKFL
Trigger: CAAGAACTTGCTATCTGCCAAGCAGGGAGCAAGATC...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGACTAGCTGGTTTAAAGTaGCGTGTCTATTCAGATTGT +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGLAGLK*RVYSDC
Trigger: ACAATCTGAATAGACACGCAACTTTAAACCAGCTAG...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCAGGGAGTCTGGGTGTTaGTTAGCAATTCACCTAAAT +
Preference number: 5 (lower is better)
Translates to: TIKNLILLALNQRSQTIARESGC*LAIHLN
Trigger: ATTTAGGTGAATTGCTAACAAACACCCAGACTCCCT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TCATGGCTTTCTGCTGTGACTGCGGATACACATTCATCTCTAACCCTTCCTTCTTGGAAGTTACACAGTTaGTGTCTACAGTCATTTAAG +
Preference number: 5 (lower is better)
Translates to: SWLSAVTADTHSSLTLPSWKLHS*CLQSFK
Trigger: CTTAAATGACTGTAGACACAAACTGTGTAACTTCCA...AGAAGGAAGGGTTAGAGATGAATGTGTATCCGCAGTCACAGCAGAAAGCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCAAGAAGCCCAACTGTTaGAGTGAATTCTTAACTGGC +
Preference number: 5 (lower is better)
Translates to: TIKNLILLALNQRSQTIAKKPNC*SEFLTG
Trigger: GCCAGTTAAGAATTCACTCAAACAGTTGGGCTTCTT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CCAGAAGTCACCTTTGAGTTAACACCTCCCAAAGCATTGCTTGTTTTGCTCAGCAATCAGAAATGTGTCTaGCATATATCACAGATGCAC +
Preference number: 5 (lower is better)
Translates to: PEVTFELTPPKALLVLLSNQKCV*HISQMH
Trigger: GTGCATCTGTGATATATGCAAGACACATTTCTGATT...GCTGAGCAAAACAAGCAATGCTTTGGGAGGTGTTAACTCAAAGGTGACTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AACCGAAGCTATTACTTCCTTGAGCTCTCTATGACTTTATTTACGGTCCTCAGTAAGGAGGGAGGTCTCTaGTCATATCATTGGATCACA +
Preference number: 5 (lower is better)
Translates to: NRSYYFLELSMTLFTVLSKEGGL*SYHWIT
Trigger: TGTGATCCAATGATATGACAAGAGACCTCCCTCCTT...ACTGAGGACCGTAAATAAAGTCATAGAGAGCTCAAGGAAGTAATAGCTTCGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGATCAAAACTGTGCAAATaGGCTCCTCTCTTTAACAGA +
Preference number: 5 (lower is better)
Translates to: HPTTLDNGQKSTDASWHGSKLCK*APLFNR
Trigger: TCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGA...TCCATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS CCA 90 bp CTAACTCTTGACATTCACTACAGCTCATGCACAAATTCCTTACCTTaGGCCTTTTTACTTCCTGTGACTTCAGAATTTCTCTTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LTLDIHYSSCTNSLP*AFLLPVTSEFLLGF
Trigger: AAAGCCCAAGAGAAATTCTGAAGTCACAGGAAGTAAAAAGGCCCAAGGTAAGGAATTTGTGCATGAGCTGTAGTGAATGTCAAGAGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTCACCTTGACCGATTCTaGTGTTTATCTTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVHLDRF*CLSSGV
Trigger: CACTCCAGAAGATAAACACAAGAATCGGTCAAGGTG...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTAGTGGTACAATGTATTaGAGGGCCCATGTCTCGTAT +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVSGTMY*RAHVSY
Trigger: ATACGAGACATGGGCCCTCAAATACATTGTACCACT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTCTTCCTCTTTTTCCTTaGTGGGCTTCTCTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVLPLFP*WASLVL
Trigger: AAGAACCAGAGAAGCCCACAAAGGAAAAAGAGGAAG...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGTCATCATTAGATGAGTaGAACCGATCATCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMSSLDE*NRSSFS
Trigger: AGAAAAGGATGATCGGTTCAACTCATCTAATGATGA...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCTTGGGAACAGTGATGTaGTTGGACAGGGTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFLGTVM*LDRVLS
Trigger: AGAGAGAACCCTGTCCAACAACATCACTGTTCCCAA...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACCTCCCAAAGCATTGCTaGTTTTGCTCAGCTAAGAAT +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYLPKHC*FCSAKN
Trigger: ATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAG...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTAGATCAAATGCTTTCTaGATCTGTGGCCCAGAAGTC +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVRSNAF*ICGPEV
Trigger: GACTTCTGGGCCACAGATCAAGAAAGCATTTGATCT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATATATGCATAAAGATCTaGCTCCCTGCTTGGCAGATA +
Preference number: 5 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHICIKI*LPAWQI
Trigger: TATCTGCCAAGCAGGGAGCAAGATCTTTATGCATAT...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp CATGATTTTGTTCACCCTAGCAGGGTCTCTGATCATACCACATTTGTAAGACATCTCTCATCAGGACAGTaGCAAAGGTCATATGAGTTT +
Preference number: 5 (lower is better)
Translates to: HDFVHPSRVSDHTTFVRHLSSGQ*QRSYEF
Trigger: AAACTCATATGACCTTTGCAACTGTCCTGATGAGAG...ATGTCTTACAAATGTGGTATGATCAGAGACCCTGCTAGGGTGAACAAAATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp TGCATCCTACAACTCTTGATAATGGTCAGAAATCAACAGATGCCTCCTGGCATGGCCAGGAACAATAGATaGTTTTCCTTAAAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: CILQLLIMVRNQQMPPGMARNNR*FSLKAL
Trigger: TAAAGCCTTTAAGGAAAACAATCTATTGTTCCTGGC...CATGCCAGGAGGCATCTGTTGATTTCTGACCATTATCAAGAGTTGTAGGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACAGGGAGTCTGGGTGTTaGTTAGCAATTCACCTAAAT +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYRESGC*LAIHLN
Trigger: ATTTAGGTGAATTGCTAACAAACACCCAGACTCCCT...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp ACTATCAAGAATCTGATCCTGTTGGCTCTAAATCAGAGGTCCCAAACTATTGCCAGGCCTTGGAGGTGTTaGATGTCAATGAATAATGTT +
Preference number: 5 (lower is better)
Translates to: TIKNLILLALNQRSQTIARPWRC*MSMNNV
Trigger: AACATTATTCATTGACATCAAACACCTCCAAGGCCT...GGCAATAGTTTGGGACCTCTGATTTAGAGCCAACAGGATCAGATTCTTGATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp GAACCAGGGGCTCATGAACCCTTTCAAGTTATATTGCAACTTTGCATTATGTACGCTGAGAGGAAAGTTTaGTCTACTCATTTTAGGAGC +
Preference number: 5 (lower is better)
Translates to: EPGAHEPFQVILQLCIMYAERKV*STHFRS
Trigger: GCTCCTAAAATGAGTAGACAAAACTTTCCTCTCAGC...GTACATAATGCAAAGTTGCAATATAACTTGAAAGGGTTCATGAGCCCCTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGTAGAAACAGTCACGTaGCTTTCATTAGCAGTGATG +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIVETVT*LSLAVM
Trigger: CATCACTGCTAATGAAAGCAACGTGACTGTTTCTAC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS GCA 90 bp GAGAAAAACGGCAGGCATCTTGTGTTTATCTTCTGGAGTGAAATATaGTTTTCCAGTTGTCTTCGAAGTTTCACCTCTGCTCCATATTTT +
Preference number: 5 (lower is better)
Translates to: EKNGRHLVFIFWSEI*FSSCLRSFTSAPYF
Trigger: AAAATATGGAGCAGAGGTGAAACTTCGAAGACAACTGGAAAAGCATATTTCACTCCAGAAGATAAACACAAGATGCCTGCCGTTTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358082.7
ENST00000360823.6
ENST00000396283.5
ENST00000396292.8
CDS-3UTR CAA 90 bp ATTCCTCCAGGATTTCTTATGTTTCTCCGTTTTCTACCTGTACAGATTAGTGTATTCCCAAAGACTTGCTaGAGTTTTGGCTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: IPPGFLMFLRFLPVQISVFPKTC*SFGWSS
Trigger: TGAACTCCAGCCAAAACTCAAGCAAGTCTTTGGGAA...TACACTAATCTGTACAGGTAGAAAACGGAGAAACATAAGAAATCCTGGAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp GAAACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGCACCACAGGAACACCTaGACCGATTCTTGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: ETHFALILDSSRISYVSPHHRNT*TDSCVY
Trigger: ATAAACACAAGAATCGGTCAAGGTGTTCCTGTGGTG...CGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTAAGTCATGTACTTTCTaGAGCTCATCATCGGTTATG +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIKSCTF*SSSSVM
Trigger: CATAACCGATGATGAGCTCAAGAAAGTACATGACTT...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCAGGATGTTCACGGAATaGTCCAGAGGGTCTATATCA +
Preference number: 5 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFRMFTE*SRGSIS
Trigger: TGATATAGACCCTCTGGACAATTCCGTGAACATCCT...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCGCAAGATCAGGACTGTaGAGTATTTCGTTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFARSGL*SISFPS
Trigger: ACTGGGAAACGAAATACTCAACAGTCCTGATCTTGC...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCACGGTCCTCAGTAACTaGCTGCTCATAAACTGCTTA +
Preference number: 5 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFTVLSN*LLINCL
Trigger: TAAGCAGTTTATGAGCAGCAAGTTACTGAGGACCGT...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTTCTCTTGTCATATCATaGGATCACACATTCACAGCG +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVSLVIS*DHTFTA
Trigger: CGCTGTGAATGTGTGATCCAATGATATGACAAGAGA...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGAGGATACAGTGGATCTaGAGTCCAAGCAAAGGAATG +
Preference number: 5 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLRIQWI*SPSKGM
Trigger: CATTCCTTTGCTTGGACTCAAGATCCACTGTATCCT...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAAAGAGGAGATCAGGTTTaGTATCAAAAGATACTCGCA +
Preference number: 5 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQRGDQV*YQKILA
Trigger: TGCGAGTATCTTTTGATACAAAACCTGATCTCCTCT...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp AGGAGCAGTCATTTTCAAAACTGTGCAAATTGGCTCCTCTCTTTAACAGATGTTAGAGGAGATCAGGTTTaGTATCAAAAGATACTCGCA +
Preference number: 5 (lower is better)
Translates to: RSSHFQNCANWLLSLTDVRGDQV*YQKILA
Trigger: TGCGAGTATCTTTTGATACAAAACCTGATCTCCTCT...AACATCTGTTAAAGAGAGGAGCCAATTTGCACAGTTTTGAAAATGACTGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTGTATTCTTCTATGCATaGCTCTTCAAAGTCATGTAC +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMIVFFYA*LFKVMY
Trigger: GTACATGACTTTGAAGAGCAATGCATAGAAGAATAC...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CACCTCCCAAAGCATTGCTTGTTTTGCTCAGCTAAGAATAAAGCAGGTATGATTTCATCATTAGATGAGTaGAACCGATCATCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: HLPKHCLFCSAKNKAGMISSLDE*NRSSFS
Trigger: AGAAAAGGATGATCGGTTCAACTCATCTAATGATGA...AATCATACCTGCTTTATTCTTAGCTGAGCAAAACAAGCAATGCTTTGGGAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp TGTACGATACATCTCCTCAACTCGTTCCTCCTGTATAGCCATTTATTTTCACAACTAATGTCAGCCAGGTaGATTCAGAATCTATTTCCT +
Preference number: 5 (lower is better)
Translates to: CTIHLLNSFLLYSHLFSQLMSAR*IQNLFP
Trigger: AGGAAATAGATTCTGAATCAACCTGGCTGACATTAG...TTGTGAAAATAAATGGCTATACAGGAGGAACGAGTTGAGGAGATGTATCGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGGAATGGACACTTGCTTaGCATGGAATATCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLEWTLA*HGISQE
Trigger: TTCTTGGGATATTCCATGCAAAGCAAGTGTCCATTC...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCAGGCCTTGGAGGTGTTaGATGTCAATGAATAATGTT +
Preference number: 5 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFRPWRC*MSMNNV
Trigger: AACATTATTCATTGACATCAAACACCTCCAAGGCCT...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGGATTGGTTATATATTTaGAGCCGCCTTCTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLDWLYI*SRLLLS
Trigger: ACTCAGAAGAAGGCGGCTCAAAATATATAACCAATC...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS-3UTR CAA 90 bp ACACATTTTGCTCTGATTTTAGATTCCTCCAGGATTTCTTATGTTTCTCCGTTTAGAGGAGATCAGGTTTaGTATCAAAAGATACTCGCA +
Preference number: 5 (lower is better)
Translates to: THFALILDSSRISYVSPFRGDQV*YQKILA
Trigger: TGCGAGTATCTTTTGATACAAAACCTGATCTCCTCT...AAACGGAGAAACATAAGAAATCCTGGAGGAATCTAAAATCAGAGCAAAATGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS-3UTR CAA 90 bp TGCATGCATTTTGTTGACACAAAATTAAGACCAGGTTTGGAGAGAGATTACTTCGTATTCTTCTATGCATaGCTCTTCAAAGTCATGTAC +
Preference number: 5 (lower is better)
Translates to: CMHFVDTKLRPGLERDYFVFFYA*LFKVMY
Trigger: GTACATGACTTTGAAGAGCAATGCATAGAAGAATAC...GAAGTAATCTCTCTCCAAACCTGGTCTTAATTTTGTGTCAACAAAATGCATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377110.9
ENST00000677713.2
CDS-3UTR CAA 90 bp CTCCAAGACACTGAATCATGGTTCTATGGATTTAGAGGAATGGATTATTTACTGCTCACTCAGATAAATTaGTGGGTTTTAAAGCCCTTA +
Preference number: 5 (lower is better)
Translates to: LQDTESWFYGFRGMDYLLLTQIN*WVLKPL
Trigger: TAAGGGCTTTAAAACCCACAAATTTATCTGAGTGAG...CAGTAAATAATCCATTCCTCTAAATCCATAGAACCATGATTCAGTGTCTTGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396283.5
CDS GCA 72 bp CGGCAAACCTGCCCCGGCTGGCGCTCCGGCTGCGTCTaGGGCTCTCCGCGTTGTCCTCGCGGTCGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: RQTCPGWRSGCV*GSPRCPRGRSS
Trigger: GCTGCTCCGACCGCGAGGACAACGCGGAGAGCCGCAGACGCAGCCGGAGCGCCAGCCGGGGCAGGTTTGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS GCA 72 bp ACGACTCGGCAAACCTGCCCCGGCTGGCGCTCCGGCTaGGTCTGCGGCTCTCCGCGTTGTCCTCGCGGTCGG +
Preference number: 6 (lower is better)
Translates to: TTRQTCPGWRSG*VCGSPRCPRGR
Trigger: CCGACCGCGAGGACAACGCGGAGAGCCGCAGACGCAGCCGGAGCGCCAGCCGGGGCAGGTTTGCCGAGTCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS CAA 90 bp AACCTGCCCCGGCTGGCGCTCCGGCTGCGTCTGCGGCTCTCCGCGTaGTCCTCGCGGTCGGAGCAGCCCCGCTCCATTTCCGCCGCATCC +
Preference number: 6 (lower is better)
Translates to: NLPRLALRLRLRLSA*SSRSEQPRSISAAS
Trigger: GGATGCGGCGGAAATGGAGCGGGGCTGCTCCGACCGCGAGGACAACGCGGAGAGCCGCAGACGCAGCCGGAGCGCCAGCCGGGGCAGGTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS GCA 72 bp AGGGCCGTGGCCATGCGCCCGATAAGGTCTTCCAGCTaGGCCAGCCGGATGTCCACGGTCTGGAGTGAAGCC +
Preference number: 6 (lower is better)
Translates to: RAVAMRPIRSSS*ASRMSTVWSEA
Trigger: GGCTTCACTCCAGACCGTGGACATCCGGCTGGCGCAGCTGGAAGACCTTATCGGGCGCATGGCCACGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp TTAACCTTTTCCACGACTCGGCAAACCTGCCCCGGCTaGCGCTCCGGCTGCGTCTGCGGCTCTCCGCGTTGT +
Preference number: 6 (lower is better)
Translates to: LTFSTTRQTCPG*RSGCVCGSPRC
Trigger: ACAACGCGGAGAGCCGCAGACGCAGCCGGAGCGCCAGCCGGGGCAGGTTTGCCGAGTCGTGGAAAAGGTTAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS CAA 72 bp GCGTCCGTGCAGTCTGACGAGGTCCTCGAGCGGATTTaGTTGGACTCGGCCCGCTCCAGACCTGTCAGGCGC +
Preference number: 6 (lower is better)
Translates to: ASVQSDEVLERI*LDSARSRPVRR
Trigger: GCGCCTGACAGGTCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGAGGACCTCGTCAGACTGCACGGACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp CCGTGCAGTCTGACGAGGTCCTCGAGCGGATTTTGTTaGACTCGGCCCGCTCCAGACCTGTCAGGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: PCSLTRSSSGFC*TRPAPDLSGAP
Trigger: TGGAGCGCCTGACAGGTCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGAGGACCTCGTCAGACTGCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 72 bp TCCGTGCAGTCTGACGAGGTCCTCGAGCGGATTTTGTaGGACTCGGCCCGCTCCAGACCTGTCAGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SVQSDEVLERIL*DSARSRPVRRS
Trigger: GGAGCGCCTGACAGGTCTGGAGCGGGCCGAGTCCAACAAAATCCGCTCGAGGACCTCGTCAGACTGCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 90 bp CTCCTCATGGACAGGCTGTCCCCTCGGCCCTCCGGCTTGGAGGACTaGCTTCTCTGGAAGGGATTTCGCAGGCTTGCTGTGTTCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LLMDRLSPRPSGLED*LLWKGFRRLAVFRC
Trigger: GCAGCGGAACACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGTCCATGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS TCA 72 bp GCTCCATTTCCGCCGCATCCCTCCACTTCTTCCCCATaGGAAGTTCGCCTCCCTCGGCCGGGAAACAGCCCA +
Preference number: 6 (lower is better)
Translates to: APFPPHPSTSSP*EVRLPRPGNSP
Trigger: TGGGCTGTTTCCCGGCCGAGGGAGGCGAACTTCTCATGGGGAAGAAGTGGAGGGATGCGGCGGAAATGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CCA 72 bp GAGCCGGCGTCTGCTGCGACGGGAGTCCCGAGCGTTTaGTGGACCCCTGCTTGGAACTTAACCTTTTCCACG +
Preference number: 6 (lower is better)
Translates to: EPASAATGVPSV*WTPAWNLTFST
Trigger: CGTGGAAAAGGTTAAGTTCCAAGCAGGGGTCCACCAAACGCTCGGGACTCCCGTCGCAGCAGACGCCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS CCA 72 bp TCCCCTCGGCCCTCCGGCTTGGAGGACTTGCTTCTCTaGAAGGGATTTCGCAGGCTTGCTGTGTTCCGCTGC +
Preference number: 6 (lower is better)
Translates to: SPRPSGLEDLLL*KGFRRLAVFRC
Trigger: GCAGCGGAACACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp TCCTCATGGACAGGCTGTCCCCTCGGCCCTCCGGCTTaGAGGACTTGCTTCTCTGGAAGGGATTTCGCAGGC +
Preference number: 6 (lower is better)
Translates to: SSWTGCPLGPPA*RTCFSGRDFAG
Trigger: GCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGTCCATGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp GACAGGCTGTCCCCTCGGCCCTCCGGCTTGGAGGACTaGCTTCTCTGGAAGGGATTTCGCAGGCTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: DRLSPRPSGLED*LLWKGFRRLAV
Trigger: CACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp CTCCTCATGGACAGGCTGTCCCCTCGGCCCTCCGGCTaGGAGGACTTGCTTCTCTGGAAGGGATTTCGCAGG +
Preference number: 6 (lower is better)
Translates to: LLMDRLSPRPSG*EDLLLWKGFRR
Trigger: CCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGTCCATGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 90 bp CTGGACAGTCTCCTCATGGACAGGCTGTCCCCTCGGCCCTCCGGCTaGGAGGACTTGCTTCTCTGGAAGGGATTTCGCAGGCTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: LDSLLMDRLSPRPSG*EDLLLWKGFRRLAV
Trigger: CACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGTCCATGAGGAGACTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS TCA 72 bp GCTCTGACGGACAATGTAGGCGGCGTCCGTGCAGTCTaGCGAGGTCCTCGAGCGGATTTTGTTGGACTCGGC +
Preference number: 6 (lower is better)
Translates to: ALTDNVGGVRAV*RGPRADFVGLG
Trigger: GCCGAGTCCAACAAAATCCGCTCGAGGACCTCGTCAGACTGCACGGACGCCGCCTACATTGTCCGTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS GCA 72 bp ACAGGCTGTCCCCTCGGCCCTCCGGCTTGGAGGACTTaGTTCTCTGGAAGGGATTTCGCAGGCTTGCTGTGT +
Preference number: 6 (lower is better)
Translates to: TGCPLGPPAWRT*FSGRDFAGLLC
Trigger: ACACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp CCGGCGTCTGCTGCGACGGGAGTCCCGAGCGTTTGGTaGACCCCTGCTTGGAACTTAACCTTTTCCACGACT +
Preference number: 6 (lower is better)
Translates to: PASAATGVPSVW*TPAWNLTFSTT
Trigger: AGTCGTGGAAAAGGTTAAGTTCCAAGCAGGGGTCCACCAAACGCTCGGGACTCCCGTCGCAGCAGACGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS CCA 72 bp AGCTTTGGAAAGCCGATGTTCTGGACAGTCTCCTCATaGACAGGCTGTCCCCTCGGCCCTCCGGCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: SFGKPMFWTVSS*TGCPLGPPAWR
Trigger: CCTCCAAGCCGGAGGGCCGAGGGGACAGCCTGTCCATGAGGAGACTGTCCAGAACATCGGCTTTCCAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp GTCCCGTGGTACCTGGATCCGTGCCTCTCCCCTCCTTaGTACTCTAGACTCCTGACGGGCCCCTGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: VPWYLDPCLSPP*YSRLLTGPCLS
Trigger: TGACAAGCAGGGGCCCGTCAGGAGTCTAGAGTACAAAGGAGGGGAGAGGCACGGATCCAGGTACCACGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS TCA 72 bp ATCCGTGCCTCTCCCCTCCTTTGTACTCTAGACTCCTaGCGGGCCCCTGCTTGTCAAGTGCCCATGTGCCAC +
Preference number: 6 (lower is better)
Translates to: IRASPLLCTLDS*RAPACQVPMCH
Trigger: GTGGCACATGGGCACTTGACAAGCAGGGGCCCGTCAGGAGTCTAGAGTACAAAGGAGGGGAGAGGCACGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS TCA 72 bp CTCTCTGCAGCCGTGCTCATGCATACCAAATGTGGCTaGATGGAGGCACACTGCCTGCTGCTTCGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: LSAAVLMHTKCG*MEAHCLLLRGG
Trigger: CCCTCCCCGAAGCAGCAGGCAGTGTGCCTCCATTCAGCCACATTTGGTATGCATGAGCACGGCTGCAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377110.9
ENST00000377111.8
ENST00000677713.2
CDS GCA 72 bp TGTGGTAGAGGGTCCGGAAGCGCTTGCGCGTGTAGTTaGAGCGATAAGCCCCGCCCATCAGGTACTCGATCA +
Preference number: 6 (lower is better)
Translates to: CGRGSGSACACS*SDKPRPSGTRS
Trigger: TGATCGAGTACCTGATGGGCGGGGCTTATCGCTGCAACTACACGCGCAAGCGCTTCCGGACCCTCTACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp GCGACGGGAGTCCCGAGCGTTTGGTGGACCCCTGCTTaGAACTTAACCTTTTCCACGACTCGGCAAACCTGC +
Preference number: 6 (lower is better)
Translates to: ATGVPSVWWTPA*NLTFSTTRQTC
Trigger: GCAGGTTTGCCGAGTCGTGGAAAAGGTTAAGTTCCAAGCAGGGGTCCACCAAACGCTCGGGACTCCCGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS CCA 72 bp GTCCGATGCCCGTCCACTCCCATCACAGACAACCACTaGCACGGGAGGGGTGTCTCGAAGGTACTCCAAAAC +
Preference number: 6 (lower is better)
Translates to: VRCPSTPITDNH*HGRGVSKVLQN
Trigger: GTTTTGGAGTACCTTCGAGACACCCCTCCCGTGCCAGTGGTTGTCTGTGATGGGAGTGGACGGGCATCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000361823.9
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396283.5
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp AGGTCTTCCAGCTGCGCCAGCCGGATGTCCACGGTCTaGAGTGAAGCCTTCATGGAGTGCTCTCTCTCGTTG +
Preference number: 6 (lower is better)
Translates to: RSSSCASRMSTV*SEAFMECSLSL
Trigger: CAACGAGAGAGAGCACTCCATGAAGGCTTCACTCCAGACCGTGGACATCCGGCTGGCGCAGCTGGAAGACCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp CTGCAGCCGTGCTCATGCATACCAAATGTGGCTGAATaGAGGCACACTGCCTGCTGCTTCGGGGAGGGGATG +
Preference number: 6 (lower is better)
Translates to: LQPCSCIPNVAE*RHTACCFGEGM
Trigger: CATCCCCTCCCCGAAGCAGCAGGCAGTGTGCCTCCATTCAGCCACATTTGGTATGCATGAGCACGGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377110.9
ENST00000377111.8
ENST00000677713.2
CDS TCA 72 bp TTCCAGCTGCGCCAGCCGGATGTCCACGGTCTGGAGTaGAGCCTTCATGGAGTGCTCTCTCTCGTTGACTTC +
Preference number: 6 (lower is better)
Translates to: FQLRQPDVHGLE*SLHGVLSLVDF
Trigger: GAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTCACTCCAGACCGTGGACATCCGGCTGGCGCAGCTGGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS GCA 72 bp TGCTGCGACGGGAGTCCCGAGCGTTTGGTGGACCCCTaGTTGGAACTTAACCTTTTCCACGACTCGGCAAAC +
Preference number: 6 (lower is better)
Translates to: CCDGSPERLVDP*LELNLFHDSAN
Trigger: GTTTGCCGAGTCGTGGAAAAGGTTAAGTTCCAAGCAGGGGTCCACCAAACGCTCGGGACTCCCGTCGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS GCA 72 bp CTTCCTGGTGTGTGCATATGGCGCACTTGGCTCCTCTaGCGAGTAGCTGTTGGCGCGCTCTATCTTGGGAAC +
Preference number: 6 (lower is better)
Translates to: LPGVCIWRTWLL*RVAVGALYLGN
Trigger: GTTCCCAAGATAGAGCGCGCCAACAGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCACACACCAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS GCA 72 bp TCCCCTCCTTTGTACTCTAGACTCCTGACGGGCCCCTaGTTGTCAAGTGCCCATGTGCCACTACCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: SPPLYSRLLTGP*LSSAHVPLPAL
Trigger: CAAGGCAGGTAGTGGCACATGGGCACTTGACAAGCAGGGGCCCGTCAGGAGTCTAGAGTACAAAGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 72 bp TGCGACGGGAGTCCCGAGCGTTTGGTGGACCCCTGCTaGGAACTTAACCTTTTCCACGACTCGGCAAACCTG +
Preference number: 6 (lower is better)
Translates to: CDGSPERLVDPC*ELNLFHDSANL
Trigger: CAGGTTTGCCGAGTCGTGGAAAAGGTTAAGTTCCAAGCAGGGGTCCACCAAACGCTCGGGACTCCCGTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354500.6
ENST00000357533.6
CDS TCA 72 bp CCAGCAAGATGTTTGCCACTAAGAGGTAGCAGGCCATaGTGGCCGGCACGATCCAAGCTCCTGTCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: PARCLPLRGSRP*WPARSKLLSCR
Trigger: CCTGCAAGACAGGAGCTTGGATCGTGCCGGCCATCATGGCCTGCTACCTCTTAGTGGCAAACATCTTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS GCA 72 bp CGGATGTCCACGGTCTGGAGTGAAGCCTTCATGGAGTaGTCTCTCTCGTTGACTTCCTCCAGCCGCATAGAC +
Preference number: 6 (lower is better)
Translates to: RMSTVWSEAFME*SLSLTSSSRID
Trigger: GTCTATGCGGCTGGAGGAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTCACTCCAGACCGTGGACATCCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp GGGGCTGCAGGAGCTTTGGGTTCTTTTGCTACAGAGTaGGAACTAGTAGCCCGGTGTAGGCTCAGGGACCTT +
Preference number: 6 (lower is better)
Translates to: GAAGALGSFATE*ELVARCRLRDL
Trigger: AAGGTCCCTGAGCCTACACCGGGCTACTAGTTCCCACTCTGTAGCAAAAGAACCCAAAGCTCCTGCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp GTCACTGATGGAGAAGCTCTTCCTGGTGTGTGCATATaGCGCACTTGGCTCCTCTGCCGAGTAGCTGTTGGC +
Preference number: 6 (lower is better)
Translates to: VTDGEALPGVCI*RTWLLCRVAVG
Trigger: GCCAACAGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCACACACCAGGAAGAGCTTCTCCATCAGTGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp CAAAGAGCCTGGGTCACTCCCTACCCTCTAAGGAGCTaGCTGCTCCATCCGACTTTGGGGGCTGAGTACAGT +
Preference number: 6 (lower is better)
Translates to: QRAWVTPYPLRS*LLHPTLGAEYS
Trigger: ACTGTACTCAGCCCCCAAAGTCGGATGGAGCAGCAAGCTCCTTAGAGGGTAGGGAGTGACCCAGGCTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS TCA 72 bp TTTGGAACGCTCAATGGTGTGGTACATCGGAGGCTCTaGGTCCCAGGGGTTTTGGCATTCTGGGAGGTGGGT +
Preference number: 6 (lower is better)
Translates to: FGTLNGVVHRRL*VPGVLAFWEVG
Trigger: ACCCACCTCCCAGAATGCCAAAACCCCTGGGACTCAGAGCCTCCGATGTACCACACCATTGAGCGTTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS GCA 72 bp TATCACCCTCCTGGGAGGATATTGCAATGGTGGCTCTaGGGCCTTTGGCCTCATTCTCCTCACTGTCAGAGC +
Preference number: 6 (lower is better)
Translates to: YHPPGRILQWWL*GLWPHSPHCQS
Trigger: GCTCTGACAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAGGGTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS GCA 72 bp CCAGCCCAGCTGCCACCAGGGCCTGCCACAATGACATaGTTTGCCTCTCTGGACCGATTTTGTCTTATTACC +
Preference number: 6 (lower is better)
Translates to: PAQLPPGPATMT*FASLDRFCLIT
Trigger: GGTAATAAGACAAAATCGGTCCAGAGAGGCAAAGCATGTCATTGTGGCAGGCCCTGGTGGCAGCTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CCA 72 bp CCAGGATTTCTGAGCCTGAGCACTGATTCTGGGTACTaGCAAAAGCAGTCCCCGGAGCAGCTCCTGTTGCTT +
Preference number: 6 (lower is better)
Translates to: PGFLSLSTDSGY*QKQSPEQLLLL
Trigger: AAGCAACAGGAGCTGCTCCGGGGACTGCTTTTGCCAGTACCCAGAATCAGTGCTCAGGCTCAGAAATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377101.5
ENST00000377105.5
ENST00000677594.1
CDS CCA 72 bp GCCTTCAGAAGTCTGACAGATGGAAGAAAGGCTGCGTaGCACAGCTTCCGGATGGTCCAGTTTAGGGGTCGA +
Preference number: 6 (lower is better)
Translates to: AFRSLTDGRKAA*HSFRMVQFRGR
Trigger: TCGACCCCTAAACTGGACCATCCGGAAGCTGTGCCACGCAGCCTTTCTTCCATCTGTCAGACTTCTGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377110.9
ENST00000377111.8
ENST00000677713.2
CDS CAA 72 bp TGCTCCGGCTTGGAGGTCTGTCTGTGGGTGCAAGTGTaGCATAGGCACTACTTGAAGGGGCTGTGGAAGGTA +
Preference number: 6 (lower is better)
Translates to: CSGLEVCLWVQV*HRHYLKGLWKV
Trigger: TACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAACACTTGCACCCACAGACAGACCTCCAAGCCGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp CCTCCTTTGTACTCTAGACTCCTGACGGGCCCCTGCTaGTCAAGTGCCCATGTGCCACTACCTGCCTTGATA +
Preference number: 6 (lower is better)
Translates to: PPLYSRLLTGPC*SSAHVPLPALI
Trigger: TATCAAGGCAGGTAGTGGCACATGGGCACTTGACAAGCAGGGGCCCGTCAGGAGTCTAGAGTACAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 90 bp AGGCACTACTTGAAGGGGCTGTGGAAGGTACTGGAGTTGAAAAGCTaGGCTCGCCCAGCCCAAGGATGTTCACGGAATTGTCCAGAGGGT +
Preference number: 6 (lower is better)
Translates to: RHYLKGLWKVLELKS*ARPAQGCSRNCPEG
Trigger: ACCCTCTGGACAATTCCGTGAACATCCTTGGGCTGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCCACAGCCCCTTCAAGTAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 90 bp GGCTTGGAGGTCTGTCTGTGGGTGCAAGTGTTGCATAGGCACTACTaGAAGGGGCTGTGGAAGGTACTGGAGTTGAAAAGCTTGGCTCGC +
Preference number: 6 (lower is better)
Translates to: GLEVCLWVQVLHRHY*KGLWKVLELKSLAR
Trigger: GCGAGCCAAGCTTTTCAACTCCAGTACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAACACTTGCACCCACAGACAGACCTCCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 90 bp TGGAAGGGATTTCGCAGGCTTGCTGTGTTCCGCTGCCTGTCGAGTTaGTCACTGATGGAGAAGCTCTTCCTGGTGTGTGCATATGGCGCA +
Preference number: 6 (lower is better)
Translates to: WKGFRRLAVFRCLSS*SLMEKLFLVCAYGA
Trigger: TGCGCCATATGCACACACCAGGAAGAGCTTCTCCATCAGTGACAAACTCGACAGGCAGCGGAACACAGCAAGCCTGCGAAATCCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS TCA 72 bp CATTTTTCTCATTCTGAAGCACGGAGATACTGGGGGTaGGGCCAACATGCTGGCCTATCAGACGCCCACAGC +
Preference number: 6 (lower is better)
Translates to: HFSHSEARRYWG*GQHAGLSDAHS
Trigger: GCTGTGGGCGTCTGATAGGCCAGCATGTTGGCCTCACCCCCAGTATCTCCGTGCTTCAGAATGAGAAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000437699.3
ENST00000677594.1
ENST00000677713.2
CDS GCA 72 bp GGGTCGCTCTCGTGTTTCCTCCATCGGCAGCACAGGTaGTGGAATATCATGGTCATGTGGCTGAAGATGATC +
Preference number: 6 (lower is better)
Translates to: GSLSCFLHRQHR*WNIMVMWLKMI
Trigger: GATCATCTTCAGCCACATGACCATGATATTCCAGCACCTGTGCTGCCGATGGAGGAAACACGAGAGCGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS GCA 72 bp GAGTTTGTCACTGATGGAGAAGCTCTTCCTGGTGTGTaGATATGGCGCACTTGGCTCCTCTGCCGAGTAGCT +
Preference number: 6 (lower is better)
Translates to: EFVTDGEALPGV*IWRTWLLCRVA
Trigger: AGCTACTCGGCAGAGGAGCCAAGTGCGCCATATGCACACACCAGGAAGAGCTTCTCCATCAGTGACAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS GCA 72 bp CTCTGGAAGGGATTTCGCAGGCTTGCTGTGTTCCGCTaGCTGTCGAGTTTGTCACTGATGGAGAAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: LWKGFRRLAVFR*LSSLSLMEKLF
Trigger: GAAGAGCTTCTCCATCAGTGACAAACTCGACAGGCAGCGGAACACAGCAAGCCTGCGAAATCCCTTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS GCA 72 bp GGAGGACTTGCTTCTCTGGAAGGGATTTCGCAGGCTTaGTGTGTTCCGCTGCCTGTCGAGTTTGTCACTGAT +
Preference number: 6 (lower is better)
Translates to: GGLASLEGISQA*CVPLPVEFVTD
Trigger: ATCAGTGACAAACTCGACAGGCAGCGGAACACAGCAAGCCTGCGAAATCCCTTCCAGAGAAGCAAGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp CAAAATCCACTCTGTCCAGAACTAAGGCATCCAACATaGCTTGCTCCAGAGATCCCACCGGCCACTGTTGCC +
Preference number: 6 (lower is better)
Translates to: QNPLCPELRHPT*LAPEIPPATVA
Trigger: GGCAACAGTGGCCGGTGGGATCTCTGGAGCAAGCCATGTTGGATGCCTTAGTTCTGGACAGAGTGGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp GAAGAAAGGGTGTGGTGGCTAGGTAGCGGCTACTTTTaGAACGCTCAATGGTGTGGTACATCGGAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: EERVWWLGSGYF*NAQWCGTSEAL
Trigger: CAGAGCCTCCGATGTACCACACCATTGAGCGTTCCAAAAGTAGCCGCTACCTAGCCACCACACCCTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp CTGAGTTATCACCCTCCTGGGAGGATATTGCAATGGTaGCTCTGCGGCCTTTGGCCTCATTCTCCTCACTGT +
Preference number: 6 (lower is better)
Translates to: LSYHPPGRILQW*LCGLWPHSPHC
Trigger: ACAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAGGGTGATAACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp TCTCTGAGTTATCACCCTCCTGGGAGGATATTGCAATaGTGGCTCTGCGGCCTTTGGCCTCATTCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: SLSYHPPGRILQ*WLCGLWPHSPH
Trigger: GTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAGGGTGATAACTCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp TGTGCTTGCTTTCAAAGCTTTGGAAAGCCGATGTTCTaGACAGTCTCCTCATGGACAGGCTGTCCCCTCGGC +
Preference number: 6 (lower is better)
Translates to: CACFQSFGKPMF*TVSSWTGCPLG
Trigger: GCCGAGGGGACAGCCTGTCCATGAGGAGACTGTCCAGAACATCGGCTTTCCAAAGCTTTGAAAGCAAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp GTCTGGAGTGAAGCCTTCATGGAGTGCTCTCTCTCGTaGACTTCCTCCAGCCGCATAGACATGTTCTCCACC +
Preference number: 6 (lower is better)
Translates to: VWSEAFMECSLS*TSSSRIDMFST
Trigger: GGTGGAGAACATGTCTATGCGGCTGGAGGAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTCACTCCAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 72 bp AAGCTTGGCTCGCCCAGCCCAAGGATGTTCACGGAATaGTCCAGAGGGTCTATATCACAGTGGAGCTCATCC +
Preference number: 6 (lower is better)
Translates to: KLGSPSPRMFTE*SRGSISQWSSS
Trigger: GGATGAGCTCCACTGTGATATAGACCCTCTGGACAATTCCGTGAACATCCTTGGGCTGGGCGAGCCAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp GGGTTCTCTCTGAGTTATCACCCTCCTGGGAGGATATaGCAATGGTGGCTCTGCGGCCTTTGGCCTCATTCT +
Preference number: 6 (lower is better)
Translates to: GFSLSYHPPGRI*QWWLCGLWPHS
Trigger: AGAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAGGGTGATAACTCAGAGAGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 90 bp GTTCACGCAGTAGATGACCCTCCCGTCACTCCTGAAGGGCTGGTCTaGGAGACGAAGGATCATTCCGACAGAAAACAGAAGGATGGCGAT +
Preference number: 6 (lower is better)
Translates to: VHAVDDPPVTPEGLV*ETKDHSDRKQKDGD
Trigger: ATCGCCATCCTTCTGTTTTCTGTCGGAATGATCCTTCGTCTCCAAGACCAGCCCTTCAGGAGTGACGGGAGGGTCATCTACTGCGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 90 bp AGAAGTTGGGGACATGGTCTCCTCACCTGCAGGGTCTATACTCTCTaGGAGCTTGAAGGTGTTCCCTTCCTGGCTGTTGAAGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: RSWGHGLLTCRVYTL*ELEGVPFLAVEAAL
Trigger: CAGAGCAGCTTCAACAGCCAGGAAGGGAACACCTTCAAGCTCCAAGAGAGTATAGACCCTGCAGGTGAGGAGACCATGTCCCCAACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 90 bp TGTTGGACAGGGTTCTCTCTGAGTTATCACCCTCCTGGGAGGATATaGCAATGGTGGCTCTGCGGCCTTTGGCCTCATTCTCCTCACTGT +
Preference number: 6 (lower is better)
Translates to: CWTGFSLSYHPPGRI*QWWLCGLWPHSPHC
Trigger: ACAGTGAGGAGAATGAGGCCAAAGGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAGGGTGATAACTCAGAGAGAACCCTGTCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 90 bp TACCTACTTCAAAGAGCCTGGGTCACTCCCTACCCTCTAAGGAGCTaGCTGCTCCATCCGACTTTGGGGGCTGAGTACAGTAATGAGGGA +
Preference number: 6 (lower is better)
Translates to: YLLQRAWVTPYPLRS*LLHPTLGAEYSNEG
Trigger: TCCCTCATTACTGTACTCAGCCCCCAAAGTCGGATGGAGCAGCAAGCTCCTTAGAGGGTAGGGAGTGACCCAGGCTCTTTGAAGTAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS TCA 72 bp AGACCTCCAGGGAAGGCAGCTCTGTCCGCAATTGCTTaGGGGGCATTGACACACCTTGTGTCAATACAGTCT +
Preference number: 6 (lower is better)
Translates to: RPPGKAALSAIA*GALTHLVSIQS
Trigger: AGACTGTATTGACACAAGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAGAGCTGCCTTCCCTGGAGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS GCA 72 bp TCCAAGACCTCCAGGGAAGGCAGCTCTGTCCGCAATTaGTTGAGGGGCATTGACACACCTTGTGTCAATACA +
Preference number: 6 (lower is better)
Translates to: SKTSREGSSVRN*LRGIDTPCVNT
Trigger: TGTATTGACACAAGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAGAGCTGCCTTCCCTGGAGGTCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp CGCACATACATGGCTTTGTTGGAATGGCCACCTCCTTaGAACTCAATGGTCCCAAAAGCATCCGTAGGGCTG +
Preference number: 6 (lower is better)
Translates to: RTYMALLEWPPP*NSMVPKASVGL
Trigger: CAGCCCTACGGATGCTTTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377097.3
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp GGCACGATCCAAGCTCCTGTCTTGCAGGGAGGCAGCTaGATTATTTTACCATCCTCTCGGGTCTCATTCTGT +
Preference number: 6 (lower is better)
Translates to: GTIQAPVLQGGS*IILPSSRVSFC
Trigger: ACAGAATGAGACCCGAGAGGATGGTAAAATAATCCAGCTGCCTCCCTGCAAGACAGGAGCTTGGATCGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp CTATACACGATGATGGTCTTCTGGAATCAGGAACAATaGCCAAGGTGTTGGCAGGGGCTGCAGGAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: LYTMMVFWNQEQ*PRCWQGLQELW
Trigger: CCAAAGCTCCTGCAGCCCCTGCCAACACCTTGGCCATTGTTCCTGATTCCAGAAGACCATCATCGTGTATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp GTGCAAGTGTTGCATAGGCACTACTTGAAGGGGCTGTaGAAGGTACTGGAGTTGAAAAGCTTGGCTCGCCCA +
Preference number: 6 (lower is better)
Translates to: VQVLHRHYLKGL*KVLELKSLARP
Trigger: TGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAACACTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp CCTCAAAATCAATGCTCCGGCTTGGAGGTCTGTCTGTaGGTGCAAGTGTTGCATAGGCACTACTTGAAGGGG +
Preference number: 6 (lower is better)
Translates to: PQNQCSGLEVCL*VQVLHRHYLKG
Trigger: CCCCTTCAAGTAGTGCCTATGCAACACTTGCACCCACAGACAGACCTCCAAGCCGGAGCATTGATTTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp CATGGAGGTGATGTCCTCAAAATCAATGCTCCGGCTTaGAGGTCTGTCTGTGGGTGCAAGTGTTGCATAGGC +
Preference number: 6 (lower is better)
Translates to: HGGDVLKINAPA*RSVCGCKCCIG
Trigger: GCCTATGCAACACTTGCACCCACAGACAGACCTCCAAGCCGGAGCATTGATTTTGAGGACATCACCTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp TTGTTGGACAGGGTTCTCTCTGAGTTATCACCCTCCTaGGAGGATATTGCAATGGTGGCTCTGCGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: LLDRVLSELSPS*EDIAMVALRPL
Trigger: CAAAGGCCGCAGAGCCACCATTGCAATATCCTCCCAGGAGGGTGATAACTCAGAGAGAACCCTGTCCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp ACCTCAAAGGTCCTGCTTTACCTACTTCAAAGAGCCTaGGTCACTCCCTACCCTCTAAGGAGCTTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: TSKVLLYLLQRA*VTPYPLRSLLL
Trigger: GAGCAGCAAGCTCCTTAGAGGGTAGGGAGTGACCCAGGCTCTTTGAAGTAGGTAAAGCAGGACCTTTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 72 bp GTAGATGACCCTCCCGTCACTCCTGAAGGGCTGGTCTaGGAGACGAAGGATCATTCCGACAGAAAACAGAAG +
Preference number: 6 (lower is better)
Translates to: VDDPPVTPEGLV*ETKDHSDRKQK
Trigger: CTTCTGTTTTCTGTCGGAATGATCCTTCGTCTCCAAGACCAGCCCTTCAGGAGTGACGGGAGGGTCATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 72 bp GGACATGGTCTCCTCACCTGCAGGGTCTATACTCTCTaGGAGCTTGAAGGTGTTCCCTTCCTGGCTGTTGAA +
Preference number: 6 (lower is better)
Translates to: GHGLLTCRVYTL*ELEGVPFLAVE
Trigger: TTCAACAGCCAGGAAGGGAACACCTTCAAGCTCCAAGAGAGTATAGACCCTGCAGGTGAGGAGACCATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp AATGGCTTCGCATACGGGGCATTAAGGTTGGAGAAGTaGGGGACATGGTCTCCTCACCTGCAGGGTCTATAC +
Preference number: 6 (lower is better)
Translates to: NGFAYGALRLEK*GTWSPHLQGLY
Trigger: GTATAGACCCTGCAGGTGAGGAGACCATGTCCCCAACTTCTCCAACCTTAATGCCCCGTATGCGAAGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp GATGGTCTTCTGGAATCAGGAACAATGGCCAAGGTGTaGGCAGGGGCTGCAGGAGCTTTGGGTTCTTTTGCT +
Preference number: 6 (lower is better)
Translates to: DGLLESGTMAKV*AGAAGALGSFA
Trigger: AGCAAAAGAACCCAAAGCTCCTGCAGCCCCTGCCAACACCTTGGCCATTGTTCCTGATTCCAGAAGACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp TTGAAGGGGCTGTGGAAGGTACTGGAGTTGAAAAGCTaGGCTCGCCCAGCCCAAGGATGTTCACGGAATTGT +
Preference number: 6 (lower is better)
Translates to: LKGLWKVLELKS*ARPAQGCSRNC
Trigger: ACAATTCCGTGAACATCCTTGGGCTGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCCACAGCCCCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp AAGACCTCCAGGGAAGGCAGCTCTGTCCGCAATTGCTaGAGGGGCATTGACACACCTTGTGTCAATACAGTC +
Preference number: 6 (lower is better)
Translates to: KTSREGSSVRNC*RGIDTPCVNTV
Trigger: GACTGTATTGACACAAGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAGAGCTGCCTTCCCTGGAGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp CTGTTGGCGCGCTCTATCTTGGGAACAGTGATGTTGTaGGACAGGGTTCTCTCTGAGTTATCACCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LLARSILGTVML*DRVLSELSPSW
Trigger: CCAGGAGGGTGATAACTCAGAGAGAACCCTGTCCAACAACATCACTGTTCCCAAGATAGAGCGCGCCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp AGAGGATGCTCTGCAGGGTCTATACTCTCTTGGAGCTaGAAGGTGTTCCCTTCCTGGCTGTTGAAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: RGCSAGSILSWS*KVFPSWLLKLL
Trigger: GAGCAGCTTCAACAGCCAGGAAGGGAACACCTTCAAGCTCCAAGAGAGTATAGACCCTGCAGAGCATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377111.8
ENST00000677594.1
CDS CAA 90 bp ATGTCCACGGTCTGGAGTGAAGCCTTCATGGAGTGCTCTCTCTCGTaGACTTCCTCCAGCCGCATAGACATGTTCTCCACCCTTTCTGAA +
Preference number: 6 (lower is better)
Translates to: MSTVWSEAFMECSLS*TSSSRIDMFSTLSE
Trigger: TTCAGAAAGGGTGGAGAACATGTCTATGCGGCTGGAGGAAGTCAACGAGAGAGAGCACTCCATGAAGGCTTCACTCCAGACCGTGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 90 bp GGAGTTGAAAAGCTTGGCTCGCCCAGCCCAAGGATGTTCACGGAATaGTCCAGAGGGTCTATATCACAGTGGAGCTCATCCATAGCAGAG +
Preference number: 6 (lower is better)
Translates to: GVEKLGSPSPRMFTE*SRGSISQWSSSIAE
Trigger: CTCTGCTATGGATGAGCTCCACTGTGATATAGACCCTCTGGACAATTCCGTGAACATCCTTGGGCTGGGCGAGCCAAGCTTTTCAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 90 bp GTGTTGCATAGGCACTACTTGAAGGGGCTGTGGAAGGTACTGGAGTaGAAAAGCTTGGCTCGCCCAGCCCAAGGATGTTCACGGAATTGT +
Preference number: 6 (lower is better)
Translates to: VLHRHYLKGLWKVLE*KSLARPAQGCSRNC
Trigger: ACAATTCCGTGAACATCCTTGGGCTGGGCGAGCCAAGCTTTTCAACTCCAGTACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 90 bp CAAAATCAATGCTCCGGCTTGGAGGTCTGTCTGTGGGTGCAAGTGTaGCATAGGCACTACTTGAAGGGGCTGTGGAAGGTACTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: QNQCSGLEVCLWVQV*HRHYLKGLWKVLEL
Trigger: CAACTCCAGTACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAACACTTGCACCCACAGACAGACCTCCAAGCCGGAGCATTGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 90 bp ATGACTTATGAGTCACTCTCTTGTAGGGCGACCCATTATCTCAGTTaGCCCAGACTGAGGGGGCCCAGGGATTTGGGACTTTCACGGCTA +
Preference number: 6 (lower is better)
Translates to: MTYESLSCRATHYLS*PRLRGPRDLGLSRL
Trigger: TAGCCGTGAAAGTCCCAAATCCCTGGGCCCCCTCAGTCTGGGCAAACTGAGATAATGGGTCGCCCTACAAGAGAGTGACTCATAAGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 90 bp CTCTTTTTCCTTTGTGGGCTTCTCTGGTTCTTCTGCCTCCTTCTCTaGGAGGTGGATTTCCTGGGCCTGAGACATATAGGGCATGTCGTC +
Preference number: 6 (lower is better)
Translates to: LFFLCGLLWFFCLLL*EVDFLGLRHIGHVV
Trigger: GACGACATGCCCTATATGTCTCAGGCCCAGGAAATCCACCTCCAAGAGAAGGAGGCAGAAGAACCAGAGAAGCCCACAAAGGAAAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 90 bp ATACACGATGATGGTCTTCTGGAATCAGGAACAATGGCCAAGGTGTaGGCAGGGGCTGCAGGAGCTTTGGGTTCTTTTGCTACAGAGTGG +
Preference number: 6 (lower is better)
Translates to: IHDDGLLESGTMAKV*AGAAGALGSFATEW
Trigger: CCACTCTGTAGCAAAAGAACCCAAAGCTCCTGCAGCCCCTGCCAACACCTTGGCCATTGTTCCTGATTCCAGAAGACCATCATCGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS GCA 72 bp CCAGCTGCCACCAGGGCCTGCCACAATGACATGCTTTaGCTCTCTGGACCGATTTTGTCTTATTACCAAGTA +
Preference number: 6 (lower is better)
Translates to: PAATRACHNDML*LSGPILSYYQV
Trigger: TACTTGGTAATAAGACAAAATCGGTCCAGAGAGGCAAAGCATGTCATTGTGGCAGGCCCTGGTGGCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CCA 72 bp ATGTCGACTCTGTTCCAGGCTAAAGCTAAGCTCAGTTaGTCTGGGGCCGAGGCATTGGCTCCTTTGAGTAAA +
Preference number: 6 (lower is better)
Translates to: MSTLFQAKAKLS*SGAEALAPLSK
Trigger: TTTACTCAAAGGAGCCAATGCCTCGGCCCCAGACCAACTGAGCTTAGCTTTAGCCTGGAACAGAGTCGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp TCGCTCTCGTGTTTCCTCCATCGGCAGCACAGGTGCTaGAATATCATGGTCATGTGGCTGAAGATGATCAGT +
Preference number: 6 (lower is better)
Translates to: SLSCFLHRQHRC*NIMVMWLKMIS
Trigger: ACTGATCATCTTCAGCCACATGACCATGATATTCCAGCACCTGTGCTGCCGATGGAGGAAACACGAGAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp TCACAATGGGAGCCTCTTCTAGAAGAAAGGGTGTGGTaGCTAGGTAGCGGCTACTTTTGGAACGCTCAATGG +
Preference number: 6 (lower is better)
Translates to: SQWEPLLEERVW*LGSGYFWNAQW
Trigger: CCATTGAGCGTTCCAAAAGTAGCCGCTACCTAGCCACCACACCCTTTCTTCTAGAAGAGGCTCCCATTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp TCGCACATACATGGCTTTGTTGGAATGGCCACCTCCTaGGAACTCAATGGTCCCAAAAGCATCCGTAGGGCT +
Preference number: 6 (lower is better)
Translates to: SHIHGFVGMATS*ELNGPKSIRRA
Trigger: AGCCCTACGGATGCTTTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377097.3
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000677594.1
ENST00000677713.2
CDS CAA 72 bp GTCTGTCTGTGGGTGCAAGTGTTGCATAGGCACTACTaGAAGGGGCTGTGGAAGGTACTGGAGTTGAAAAGC +
Preference number: 6 (lower is better)
Translates to: VCLWVQVLHRHY*KGLWKVLELKS
Trigger: GCTTTTCAACTCCAGTACCTTCCACAGCCCCTTCAAGTAGTGCCTATGCAACACTTGCACCCACAGACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS TCA 72 bp TCATTTCGGGAGAGGCGACTTTCATTTTTCTCATTCTaGAGCACGGAGATACTGGGGGTGAGGCCAACATGC +
Preference number: 6 (lower is better)
Translates to: SFRERRLSFFSF*STEILGVRPTC
Trigger: GCATGTTGGCCTCACCCCCAGTATCTCCGTGCTTCAGAATGAGAAAAATGAAAGTCGCCTCTCCCGAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000437699.3
ENST00000677594.1
ENST00000677713.2
CDS CAA 72 bp AATAGAAAGAATGGCTTCGCATACGGGGCATTAAGGTaGGAGAAGTTGGGGACATGGTCTCCTCACCTGCAG +
Preference number: 6 (lower is better)
Translates to: NRKNGFAYGALR*EKLGTWSPHLQ
Trigger: CTGCAGGTGAGGAGACCATGTCCCCAACTTCTCCAACCTTAATGCCCCGTATGCGAAGCCATTCTTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp AAAGCAGTCCCCGGAGCAGCTCCTGTTGCTTTCATTTaGCTGCAGCTAGGGCTGGTCATTCCGTTAATAATG +
Preference number: 6 (lower is better)
Translates to: KAVPGAAPVAFI*LQLGLVIPLIM
Trigger: CATTATTAACGGAATGACCAGCCCTAGCTGCAGCAAAATGAAAGCAACAGGAGCTGCTCCGGGGACTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677594.1
CDS CAA 90 bp AATAGAAAGAATGGCTTCGCATACGGGGCATTAAGGTTGGAGAAGTaGGGGACATGGTCTCCTCACCTGCAGGGTCTATACTCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: NRKNGFAYGALRLEK*GTWSPHLQGLYSLG
Trigger: TCCAAGAGAGTATAGACCCTGCAGGTGAGGAGACCATGTCCCCAACTTCTCCAACCTTAATGCCCCGTATGCGAAGCCATTCTTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 90 bp TTTGTCTCCAAGACCTCCAGGGAAGGCAGCTCTGTCCGCAATTGCTaGAGGGGCATTGACACACCTTGTGTCAATACAGTCTGTAATACT +
Preference number: 6 (lower is better)
Translates to: FVSKTSREGSSVRNC*RGIDTPCVNTVCNT
Trigger: AGTATTACAGACTGTATTGACACAAGGTGTGTCAATGCCCCTCAAGCAATTGCGGACAGAGCTGCCTTCCCTGGAGGTCTTGGAGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS TCA 72 bp AACTCAATGGTCCCAAAAGCATCCGTAGGGCTGAGTTaGGTGTGTTTGCTGATGGACCACTTTTCAGACTGG +
Preference number: 6 (lower is better)
Translates to: NSMVPKASVGLS*VCLLMDHFSDW
Trigger: CCAGTCTGAAAAGTGGTCCATCAGCAAACACACTCAACTCAGCCCTACGGATGCTTTTGGGACCATTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377097.3
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000437699.3
ENST00000677594.1
ENST00000677713.2
CDS TCA 72 bp CTTGGGAACAGTGATGTTGTTGGACAGGGTTCTCTCTaGGTTATCACCCTCCTGGGAGGATATTGCAATGGT +
Preference number: 6 (lower is better)
Translates to: LGNSDVVGQGSL*VITLLGGYCNG
Trigger: ACCATTGCAATATCCTCCCAGGAGGGTGATAACTCAGAGAGAACCCTGTCCAACAACATCACTGTTCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS TCA 72 bp CAGTGCCATCCATATATGCAGCAGCTCTCCCATTTCTaGAGAAAGTCACCCCTTCAGGCACGTACATTGCAA +
Preference number: 6 (lower is better)
Translates to: QCHPYMQQLSHF*RKSPLQARTLQ
Trigger: TTGCAATGTACGTGCCTGAAGGGGTGACTTTCTTCAGAAATGGGAGAGCTGCTGCATATATGGATGGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS GCA 72 bp AATCGAGATCACATTGGGTCCTCCTTCCACTATGAGTaGCACCACAGGAACACCTTGACCGATTCTTGTGTT +
Preference number: 6 (lower is better)
Translates to: NRDHIGSSFHYE*HHRNTLTDSCV
Trigger: AACACAAGAATCGGTCAAGGTGTTCCTGTGGTGGCACTCATAGTGGAAGGAGGACCCAATGTGATCTCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000357533.6
ENST00000361823.9
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp CAGAGACATAGATGTCTATACACGATGATGGTCTTCTaGAATCAGGAACAATGGCCAAGGTGTTGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: QRHRCLYTMMVF*NQEQWPRCWQG
Trigger: CCCCTGCCAACACCTTGGCCATTGTTCCTGATTCCAGAAGACCATCATCGTGTATAGACATCTATGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CCA 72 bp ATTTCACAATGGGAGCCTCTTCTAGAAGAAAGGGTGTaGTGGCTAGGTAGCGGCTACTTTTGGAACGCTCAA +
Preference number: 6 (lower is better)
Translates to: ISQWEPLLEERV*WLGSGYFWNAQ
Trigger: TTGAGCGTTCCAAAAGTAGCCGCTACCTAGCCACCACACCCTTTCTTCTAGAAGAGGCTCCCATTGTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS CAA 72 bp GAACTCAATGGTCCCAAAAGCATCCGTAGGGCTGAGTaGAGTGTGTTTGCTGATGGACCACTTTTCAGACTG +
Preference number: 6 (lower is better)
Translates to: ELNGPKSIRRAE*SVFADGPLFRL
Trigger: CAGTCTGAAAAGTGGTCCATCAGCAAACACACTCAACTCAGCCCTACGGATGCTTTTGGGACCATTGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377097.3
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000437699.3
ENST00000677594.1
ENST00000677713.2
CDS CAA 90 bp ACCTCCTTGGAACTCAATGGTCCCAAAAGCATCCGTAGGGCTGAGTaGAGTGTGTTTGCTGATGGACCACTTTTCAGACTGGATGTCATT +
Preference number: 6 (lower is better)
Translates to: TSLELNGPKSIRRAE*SVFADGPLFRLDVI
Trigger: AATGACATCCAGTCTGAAAAGTGGTCCATCAGCAAACACACTCAACTCAGCCCTACGGATGCTTTTGGGACCATTGAGTTCCAAGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377097.3
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000437699.3
ENST00000677594.1
ENST00000677713.2
CDS CAA 90 bp AAAAGATACTCGCACATACATGGCTTTGTTGGAATGGCCACCTCCTaGGAACTCAATGGTCCCAAAAGCATCCGTAGGGCTGAGTTGAGT +
Preference number: 6 (lower is better)
Translates to: KRYSHIHGFVGMATS*ELNGPKSIRRAELS
Trigger: ACTCAACTCAGCCCTACGGATGCTTTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCGAGTATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377097.3
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000677594.1
ENST00000677713.2
CDS CAA 90 bp GTAGGAAGGAGAAGCTGTGGTCTGATAAATCTAACATCCCTGTTTTaGGAGGAAGGTGGCGATGGCAATGAAGACCCATTTGGGACAGGT +
Preference number: 6 (lower is better)
Translates to: VGRRSCGLINLTSLF*EEGGDGNEDPFGTG
Trigger: ACCTGTCCCAAATGGGTCTTCATTGCCATCGCCACCTTCCTCCAAAAACAGGGATGTTAGATTTATCAGACCACAGCTTCTCCTTCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS TCA 72 bp ACGGCCAGCGTTCCATCTTCACTAACACGATATAGTTaGAGAGCATCAGGTATCCGATATACGCCAGTGTGT +
Preference number: 6 (lower is better)
Translates to: TASVPSSLTRYS*RASGIRYTPVC
Trigger: ACACACTGGCGTATATCGGATACCTGATGCTCTTCAACTATATCGTGTTAGTGAAGATGGAACGCTGGCCGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp CCTGGATACTCTCGCTTTTTGACATCCCTGACCAAGTaGTACAATGTATTTGAGGGCCCATGTCTCGTATTG +
Preference number: 6 (lower is better)
Translates to: PGYSRFLTSLTK*YNVFEGPCLVL
Trigger: CAATACGAGACATGGGCCCTCAAATACATTGTACCACTTGGTCAGGGATGTCAAAAAGCGAGAGTATCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357533.6
ENST00000377105.5
ENST00000396280.9
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp GTTTCCAAACAGGCTTTAGGGTTCTTCCATGGGGCCTaGAAAGTTACCTACCCGCCTTCTTCTGAGTATTTA +
Preference number: 6 (lower is better)
Translates to: VSKQALGFFHGA*KVTYPPSSEYL
Trigger: TAAATACTCAGAAGAAGGCGGGTAGGTAACTTTCCAGGCCCCATGGAAGAACCCTAAAGCCTGTTTGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361823.9
CDS CAA 90 bp ATCTCAGGATCATCCAAGTCAATGTCCACCTCTTCTTCACGTTTCTaGGTTGTCTTTCTTCCTCGCCTCAAGGGAATATCATCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: ISGSSKSMSTSSSRF*VVFLPRLKGISSLL
Trigger: CAAGAGGGATGATATTCCCTTGAGGCGAGGAAGAAAGACAACCAAGAAACGTGAAGAAGAGGTGGACATTGACTTGGATGATCCTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000396280.9
CDS CAA 90 bp TCTGCCGTTTTTCATGTTAAGACCAGGTCCGCTTTTTGCCTGTCTTaGTGTCTTTGTCAGTGCTGTTCTAGAGGCCTTTGTGTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: SAVFHVKTRSAFCLS*CLCQCCSRGLCVLS
Trigger: ACTGAGAACACAAAGGCCTCTAGAACAGCACTGACAAAGACACAAAGACAGGCAAAAAGCGGACCTGGTCTTAACATGAAAAACGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS GCA 72 bp TCACGATGGGTGCATTGTAGAATTCATAGATTTTTCTaGCGAGGGGGATTAACCGGTGCTTGCTCTGAACTT +
Preference number: 6 (lower is better)
Translates to: SRWVHCRIHRFF*RGGLTGACSEL
Trigger: AAGTTCAGAGCAAGCACCGGTTAATCCCCCTCGGCAGAAAAATCTATGAATTCTACAATGCACCCATCGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp TCAAAAGATACTCGCACATACATGGCTTTGTTGGAATaGCCACCTCCTTGGAACTCAATGGTCCCAAAAGCA +
Preference number: 6 (lower is better)
Translates to: SKDTRTYMALLE*PPPWNSMVPKA
Trigger: TGCTTTTGGGACCATTGAGTTCCAAGGAGGTGGCCATTCCAACAAAGCCATGTATGTGCGAGTATCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377097.3
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000677594.1
ENST00000677713.2
CDS CAA 90 bp CCAACTGCCATTCCTTGGTCATCAGGTGTAAGAGGAGATCAGGTTTaGTATCAAAAGATACTCGCACATACATGGCTTTGTTGGAATGGC +
Preference number: 6 (lower is better)
Translates to: PTAIPWSSGVRGDQV*YQKILAHTWLCWNG
Trigger: GCCATTCCAACAAAGCCATGTATGTGCGAGTATCTTTTGATACAAAACCTGATCTCCTCTTACACCTGATGACCAAGGAATGGCAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354500.6
ENST00000357533.6
ENST00000360823.6
ENST00000361823.9
ENST00000377097.3
ENST00000377101.5
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396283.5
ENST00000677594.1
ENST00000677713.2
CDS CAA 90 bp ATCTCAGGATCATCCAAGTCAATGTCCACCTCTTCTTCACGTTTCTaGGTTGTCTTTCTTCCTCGCCTCAAGGGAATATCATCCTCCATT +
Preference number: 6 (lower is better)
Translates to: ISGSSKSMSTSSSRF*VVFLPRLKGISSSI
Trigger: AATGGAGGATGATATTCCCTTGAGGCGAGGAAGAAAGACAACCAAGAAACGTGAAGAAGAGGTGGACATTGACTTGGATGATCCTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS TCA 72 bp CTCATCCATAGCAGAGACATAGATGTCTATACACGATaGTGGTCTTCTGGAATCAGGAACAATGGCCAAGGT +
Preference number: 6 (lower is better)
Translates to: LIHSRDIDVYTR*WSSGIRNNGQG
Trigger: ACCTTGGCCATTGTTCCTGATTCCAGAAGACCATCATCGTGTATAGACATCTATGTCTCTGCTATGGATGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677713.2
CDS TCA 72 bp AATATATTCACTGGAAGAGGAGCCTGTGGGTCTCTATaGAGCCACAAATACAGTCCCAAAAGTAAGTCCCGT +
Preference number: 6 (lower is better)
Translates to: NIFTGRGACGSL*SHKYSPKSKSR
Trigger: ACGGGACTTACTTTTGGGACTGTATTTGTGGCTTCATAGAGACCCACAGGCTCCTCTTCCAGTGAATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS GCA 72 bp TTTTTGCTGTTAATTGAATGGAGACCTCAAAGGTCCTaGTTTACCTACTTCAAAGAGCCTGGGTCACTCCCT +
Preference number: 6 (lower is better)
Translates to: FLLLIEWRPQRS*FTYFKEPGSLP
Trigger: AGGGAGTGACCCAGGCTCTTTGAAGTAGGTAAAGCAGGACCTTTGAGGTCTCCATTCAATTAACAGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS GCA 72 bp AAAATGACTGAAAATGTGGAGACAGCTGGCCACCCATaGGGAATTACCTACCAATTCCTTCTTCTTCATGCA +
Preference number: 6 (lower is better)
Translates to: KMTENVETAGHP*GITYQFLLLHA
Trigger: TGCATGAAGAAGAAGGAATTGGTAGGTAATTCCGCATGGGTGGCCAGCTGTCTCCACATTTTCAGTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377101.5
CDS CCA 72 bp TTGAGTAAAGCTGTCAGGATAGCCAAATCAATGTCCTaGTGTCCTTCTGATCCCATCCGAAATACCGTAATC +
Preference number: 6 (lower is better)
Translates to: LSKAVRIAKSMS*CPSDPIRNTVI
Trigger: GATTACGGTATTTCGGATGGGATCAGAAGGACACCAGGACATTGATTTGGCTATCCTGACAGCTTTACTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 72 bp TCATCCAAGTCAATGTCCACCTCTTCTTCACGTTTCTaGGTTGTCTTTCTTCCTCGCCTCAAGGGAATATCA +
Preference number: 6 (lower is better)
Translates to: SSKSMSTSSSRF*VVFLPRLKGIS
Trigger: TGATATTCCCTTGAGGCGAGGAAGAAAGACAACCAAGAAACGTGAAGAAGAGGTGGACATTGACTTGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 72 bp CTACGAGCCATGCCAGTGGGAACAACCGCTACTTACTaGTGTTTATCTTCTGGAGTGAAATATGCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: LRAMPVGTTATY*CLSSGVKYAFP
Trigger: TGGAAAAGCATATTTCACTCCAGAAGATAAACACAAGTAAGTAGCGGTTGTTCCCACTGGCATGGCTCGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 72 bp AGAAGCTGTGGTCTGATAAATCTAACATCCCTGTTTTaGGAGGAAGGTGGCGATGGCAATGAAGACCCATTT +
Preference number: 6 (lower is better)
Translates to: RSCGLINLTSLF*EEGGDGNEDPF
Trigger: AAATGGGTCTTCATTGCCATCGCCACCTTCCTCCAAAAACAGGGATGTTAGATTTATCAGACCACAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 72 bp TTTCATGTTAAGACCAGGTCCGCTTTTTGCCTGTCTTaGTGTCTTTGTCAGTGCTGTTCTAGAGGCCTTTGT +
Preference number: 6 (lower is better)
Translates to: FHVKTRSAFCLS*CLCQCCSRGLC
Trigger: ACAAAGGCCTCTAGAACAGCACTGACAAAGACACAAAGACAGGCAAAAAGCGGACCTGGTCTTAACATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 90 bp TGTCAGTGCTGTTCTAGAGGCCTTTGTGTTCTCAGTGAGCATTTTTaGCTGTTAATTGAATGGAGACCTCAAAGGTCCTGCTTTACCTAC +
Preference number: 6 (lower is better)
Translates to: CQCCSRGLCVLSEHF*LLIEWRPQRSCFTY
Trigger: GTAGGTAAAGCAGGACCTTTGAGGTCTCCATTCAATTAACAGCAAAAAATGCTCACTGAGAACACAAAGGCCTCTAGAACAGCACTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS TCA 72 bp TGTCAGGATAGCCAAATCAATGTCCTGGTGTCCTTCTaGTCCCATCCGAAATACCGTAATCAATTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: CQDSQINVLVSF*SHPKYRNQFLL
Trigger: AAGAAGGAATTGATTACGGTATTTCGGATGGGATCAGAAGGACACCAGGACATTGATTTGGCTATCCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CCA 72 bp GGAGAGAATTTTAGGGCTGGATTCTTGAGCCTTCTGTaGCGGATATTAAGAAGGTTTAGTTGTGCTTGCTTT +
Preference number: 6 (lower is better)
Translates to: GENFRAGFLSLL*RILRRFSCACF
Trigger: AAAGCAAGCACAACTAAACCTTCTTAATATCCGCCACAGAAGGCTCAAGAATCCAGCCCTAAAATTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000677713.2
CDS CCA 72 bp GTTCTCCTCTGGATGGCTTCCTCTCATTCTAAGCTCTaGCCCGGTAGAAATAATGGTTCATGTTTAAAACTT +
Preference number: 6 (lower is better)
Translates to: VLLWMASSHSKL*PGRNNGSCLKL
Trigger: AAGTTTTAAACATGAACCATTATTTCTACCGGGCCAGAGCTTAGAATGAGAGGAAGCCATCCAGAGGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 72 bp TGCCACAATGACATGCTTTGCCTCTCTGGACCGATTTaGTCTTATTACCAAGTACTGAACTTGACCCTGAAT +
Preference number: 6 (lower is better)
Translates to: CHNDMLCLSGPI*SYYQVLNLTLN
Trigger: ATTCAGGGTCAAGTTCAGTACTTGGTAATAAGACAAAATCGGTCCAGAGAGGCAAAGCATGTCATTGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 90 bp TCCACCCTTTCTGAAGTCACCCGTATCCTCTCATCATTAGATGAGTaGAACCGATCATCCTTTTCTCTGAAGTATTCTTCTATGCATTGC +
Preference number: 6 (lower is better)
Translates to: STLSEVTRILSSLDE*NRSSFSLKYSSMHC
Trigger: GCAATGCATAGAAGAATACTTCAGAGAAAAGGATGATCGGTTCAACTCATCTAATGATGAGAGGATACGGGTGACTTCAGAAAGGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 90 bp CTTTGCCTCTCTGGACCGATTTTGTCTTATTACCAAGTACTGAACTaGACCCTGAATTTATTCCTTGTTTCCTTGCTCTTATCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: LCLSGPILSYYQVLN*TLNLFLVSLLLSSS
Trigger: TGAAGAGGATAAGAGCAAGGAAACAAGGAATAAATTCAGGGTCAAGTTCAGTACTTGGTAATAAGACAAAATCGGTCCAGAGAGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 72 bp TCTGAAGTCACCCGTATCCTCTCATCATTAGATGAGTaGAACCGATCATCCTTTTCTCTGAAGTATTCTTCT +
Preference number: 6 (lower is better)
Translates to: SEVTRILSSLDE*NRSSFSLKYSS
Trigger: AGAAGAATACTTCAGAGAAAAGGATGATCGGTTCAACTCATCTAATGATGAGAGGATACGGGTGACTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357533.6
ENST00000358082.7
ENST00000360823.6
ENST00000377105.5
ENST00000377110.9
ENST00000377111.8
ENST00000396280.9
ENST00000396285.5
ENST00000396292.8
ENST00000408909.6
ENST00000677594.1
ENST00000677713.2
CDS CAA 72 bp TGCAAGCCACTTAGTGATCTGGGGAGCATTGCTGTTTaGATGATGCTACCTTTCACAGTTAAAACAAATGTT +
Preference number: 6 (lower is better)
Translates to: CKPLSDLGSIAV*MMLPFTVKTNV
Trigger: AACATTTGTTTTAACTGTGAAAGGTAGCATCATCAAAACAGCAATGCTCCCCAGATCACTAAGTGGCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 90 bp AGTCTGAAGAGAAAGCTTATCTGCATACACATACCCCAGATGGAGTaGAATTTTTCACACATGATACATAAGCTGGAGTCACTAATTGTG +
Preference number: 6 (lower is better)
Translates to: SLKRKLICIHIPQME*NFSHMIHKLESLIV
Trigger: CACAATTAGTGACTCCAGCTTATGTATCATGTGTGAAAAATTCAACTCCATCTGGGGTATGTGTATGCAGATAAGCTTTCTCTTCAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 72 bp AACCTACCACCCATTGATCACAGTGCTTTGTTACATTaGATCTCTGCTGGTCTCTGTATATTTTCTAGTCTT +
Preference number: 6 (lower is better)
Translates to: NLPPIDHSALLH*ISAGLCIFSSL
Trigger: AAGACTAGAAAATATACAGAGACCAGCAGAGATCAAATGTAACAAAGCACTGTGATCAATGGGTGGTAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354500.6
CDS CAA 72 bp TGTTCTAAATTGCTGACTGAGGATTGCATTAAAGGTTaGTATTCTTCTGCCGTTTTTCATGTTAAGACCAGG +
Preference number: 6 (lower is better)
Translates to: CSKLLTEDCIKG*YSSAVFHVKTR
Trigger: CCTGGTCTTAACATGAAAAACGGCAGAAGAATACAAACCTTTAATGCAATCCTCAGTCAGCAATTTAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354500.6