RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000142185

Ensembl transcript IDs: ENST00000300481.13, ENST00000300482.9, ENST00000397928.5, ENST00000397928.6, ENST00000397932.6, ENST00000431901.5, ENST00000490982.1, ENST00000498430.5, ENST00000621064.1

Found 1081 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCCCCCACGTCCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATaGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGCTTCTGC +
Preference number: 1 (lower is better)
Translates to: RPPRPRLLLMPSLAT*PARGSQGVGRESFC
Trigger: GCAGAAGCTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGGACGTGGGGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR CCA 90 bp TCCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTaGCTCCCAGGGAGTAGGGAGGGAGAGCTTCTGCAGCCTCGTCCC +
Preference number: 1 (lower is better)
Translates to: SPPPAHAVPGHMAST*LPGSREGELLQPRP
Trigger: GGGACGAGGCTGCAGAAGCTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR CCA 90 bp AGAGCTTTGGGTCAGGTGGAAGACAGAGGCCTGTCCAGGGAAGGGTaGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCAGGC +
Preference number: 1 (lower is better)
Translates to: RALGQVEDRGLSREG*ASPRPVLSGQAAPG
Trigger: GCCTGGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGTCTTCCACCTGACCCAAAGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR CCA 90 bp CAGCCTGAGTCCTGGCCAGGCTCAGGAGAGAGAAGCCCTGGTTTCTaGGGGGAACGTCTATGGACTGGAGCCGCCCAGCCTGAGGGCACA +
Preference number: 1 (lower is better)
Translates to: QPESWPGSGERSPGF*GERLWTGAAQPEGT
Trigger: TGTGCCCTCAGGCTGGGCGGCTCCAGTCCATAGACGTTCCCCCCAGAAACCAGGGCTTCTCTCTCCTGAGCCTGGCCAGGACTCAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR CCA 90 bp GCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCATGTaGATGCCTGCATCCTGGCCTGGTGGGCTTGGGGACGATGCTGGA +
Preference number: 1 (lower is better)
Translates to: AHWHHHAGEAKEEGM*MPASWPGGLGDDAG
Trigger: TCCAGCATCGTCCCCAAGCCCACCAGGCCAGGATGCAGGCATCCACATGCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR TCA 90 bp ACTGGGTCCACCAAACCCCATCATGTGCAGGGCCCAGGAACAGCCTaGGTCCTGGCCAGGCTCAGGAGAGAGAAGCCCTGGTTTCTGGGG +
Preference number: 1 (lower is better)
Translates to: TGSTKPHHVQGPGTA*VLARLRREKPWFLG
Trigger: CCCCAGAAACCAGGGCTTCTCTCTCCTGAGCCTGGCCAGGACTCAGGCTGTTCCTGGGCCCTGCACATGATGGGGTTTGGTGGACCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR TCA 90 bp GACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATaGGCTGCTCGGGGTGACACAGCCAGGAAGGGAGTGGACTCTGGC +
Preference number: 1 (lower is better)
Translates to: DSPGNLPQANDLHGG*AARGDTARKGVDSG
Trigger: GCCAGAGTCCACTCCCTTCCTGGCTGTGTCACCCCGAGCAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR TCA 90 bp GGCCTGGGCTTTGTCTGGGCTCCTGTACCCCCACGGAGTTTATCCTaGCAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAA +
Preference number: 1 (lower is better)
Translates to: GLGFVWAPVPPRSLS*QSGVQTVPLAQARQ
Trigger: TTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCCAGACAAAGCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR CCA 90 bp AGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTCTTaGGGAGAGTGGCAGGGCCCCTTCCTCACAGACATAGGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: RQGSMLRHLETWRPS*GEWQGPFLTDIGLR
Trigger: CCTCAGGCCTATGTCTGTGAGGAAGGGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR CCA 90 bp CACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTaGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGAAG +
Preference number: 1 (lower is better)
Translates to: HRGIEENFRQPSHSP*PWTCQELYLWKAQK
Trigger: CTTCTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR CCA 90 bp GGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTaGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGAAGAGCCAG +
Preference number: 1 (lower is better)
Translates to: GIEENFRQPSHSPWP*TCQELYLWKAQKSQ
Trigger: CTGGCTCTTCTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGGGCCCCTCAGCTCTaGGTAGCCTGTGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: PRLLLMPSLATWPARGSQGAPQL*VACALS
Trigger: AGACAGGGCACAGGCTACTCAGAGCTGAGGGGCCCC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR GCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACCCCGCCTCCTGCTCATaGCGTCCCTGGCCACATGGC +
Preference number: 2 (lower is better)
Translates to: PGDRGELQAAVTQPLALDPASCS*RPWPHG
Trigger: GCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGG...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGAAGGGAGTGGACTCTaGCCAAGGGCCCAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: PRLLLMPSLATWPARGSQEGSGL*PRAQLH
Trigger: GTGCAGCTGGGCCCTTGGCCAGAGTCCACTCCCTTC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCCCCTGGGGCCAACCCTaGCAGGGGCCCTCTGCGTCT +
Preference number: 2 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAPWGQP*QGPSAS
Trigger: AGACGCAGAGGGCCCCTGCCAGGGTTGGCCCCAGGG...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGCCCAGCCCCTCGCCTaGTGGCCAAGGGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEAQPLA*WPRVPG
Trigger: CCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR GCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCCACGTCCCCGCCTCCTaGTCATGCCGTCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAHVPAS*SCRPWP
Trigger: TGGCCAGGGACGGCATGAGCAGGAGGCGGGGACGTG...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCGTAGGGCTGAGGGGCTaGAGGACATCCACAGGCTGC +
Preference number: 2 (lower is better)
Translates to: VQGRVGITSASAQWPGSPVGLRG*RTSTGC
Trigger: GCAGCCTGTGGATGTCCTGCAGCCCCTCAGCCCTAC...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGCAGCCAGGAAGGGAGTaGACTCTGGCCAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: AVPGHMASTWLPGSREGEQPGRE*TLAKGP
Trigger: TGGGCCCTTGGCCAGAGTCCACTCCCTTCCTGGCTG...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAACCGTCCCTGGCCACATaGCCAGCACGTGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQPSLAT*PARGSQ
Trigger: CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGG...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCGCCCAGCCCCTCGCCTaGTGGCCAAGGGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSAQPLA*WPRVPG
Trigger: CCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGC...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR TCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGGCCCAGCCCCTCGCCTaGTGGCCAAGGGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELAQPLA*WPRVPG
Trigger: CCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGC...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCGACCTCCATGGTGGATaGGCTGCTCGGGGTGACACA +
Preference number: 2 (lower is better)
Translates to: VQGRVGITSASAQWPGSPDLHGG*AARGDT
Trigger: TGTGTCACCCCGAGCAGCTCATCCACCATGGAGGTC...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCACCACGTTCCCCTCCTaGGGGCCCTCATGGTTCACG +
Preference number: 2 (lower is better)
Translates to: LSREGWASPRPVLSGQAATTFPS*GPSWFT
Trigger: CGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGT...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGCTCTGAGTAGCCTGTaGCCTGTCTTGAGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGALSSL*PVLSSP
Trigger: AGGAGAGCTCAAGACAGGGCACAGGCTACTCAGAGC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR GCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGGAGGGAGAGCTTCTaGAGCCTCGTCCCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQGRESF*SLVPGS
Trigger: GGACCCTGGGACGAGGCTGCAGAAGCTCTCCCTCCC...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGAGCCGTGAGGGGCACTaGGTCCACCAAACCCCATCA +
Preference number: 2 (lower is better)
Translates to: AVPGHMASTWLPGSREGESREGH*VHQTPS
Trigger: TGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCT...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCTGCTCATGCCGTCCCTaGCCACATGGCCAGCACGTG +
Preference number: 2 (lower is better)
Translates to: LSREGWASPRPVLSGQAACSCRP*PHGQHV
Trigger: CACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCA...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCGTCACACAGCCCCTaGCCCTGGACGTGTCAGGAA +
Preference number: 2 (lower is better)
Translates to: LSREGWASPRPVLSGQAAPSHSP*PWTCQE
Trigger: TTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGG...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCTGGATGCCTGCATCCTaGCCTGGTGGGCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGWMPAS*PGGLGD
Trigger: GTCCCCAAGCCCACCAGGCCAGGATGCAGGCATCCA...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAGCCCAGCCCCTCGCCTaGTGGCCAAGGGTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLAQPLA*WPRVPG
Trigger: CCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGC...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGATGAGCTGCTCGGGGTaGCACAGCCAGGAAGGGAGT +
Preference number: 2 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRMSCSG*HSQEGS
Trigger: ACTCCCTTCCTGGCTGTGTCACCCCGAGCAGCTCAT...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCATGAGCTGCTCGGGGTaGCACAGCCAGGAAGGGAGT +
Preference number: 2 (lower is better)
Translates to: LSREGWASPRPVLSGQAAMSCSG*HSQEGS
Trigger: ACTCCCTTCCTGGCTGTGTCACCCCGAGCAGCTCAT...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGCCAAACCCCATCATGTaGAGGGCCCAGGAACAGCCT +
Preference number: 2 (lower is better)
Translates to: AVPGHMASTWLPGSREGEPNPIM*RAQEQP
Trigger: AGGCTGTTCCTGGGCCCTGCACATGATGGGGTTTGG...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR GCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGGTTCATGAGGTCATCTaGAGCAGACTTGCGGCAGCC +
Preference number: 2 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGVHEVI*SRLAAA
Trigger: GGCTGCCGCAAGTCTGCTGCAGATGACCTCATGAAC...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR GCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGCTCTGAGTAGCCTGTaGCCTGTCTTGAGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: PRLLLMPSLATWPARGSQALSSL*PVLSSP
Trigger: AGGAGAGCTCAAGACAGGGCACAGGCTACTCAGAGC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR GCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCTGGGCTTGGGGACGATaGTGGAGCCCAGGTTTAGGA +
Preference number: 2 (lower is better)
Translates to: VQGRVGITSASAQWPGSPWAWGR*WSPGLG
Trigger: TCCTAAACCTGGGCTCCAGCATCGTCCCCAAGCCCA...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGTGCATCCTGGCCTGGTaGGCTTGGGGACGATGCTGG +
Preference number: 2 (lower is better)
Translates to: LCRGARAHWHHHAGEAKECILAW*AWGRCW
Trigger: CCAGCATCGTCCCCAAGCCCACCAGGCCAGGATGCA...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCTGGATGCCTGCATCCTaGCCTGGTGGGCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAWMPAS*PGGLGD
Trigger: GTCCCCAAGCCCACCAGGCCAGGATGCAGGCATCCA...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCAAGGAGGAGGGCATGTaGATGCCTGCATCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: VQGRVGITSASAQWPGSPKEEGM*MPASWP
Trigger: AGGCCAGGATGCAGGCATCCACATGCCCTCCTCCTT...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCGGTGCCAGGGCACATTaGCACCACCACGCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAGARAH*HHHAGE
Trigger: TTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACC...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGGGGCCCCTCAGCTCTaGGTAGCCTGTGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDGAPQL*VACALS
Trigger: AGACAGGGCACAGGCTACTCAGAGCTGAGGGGCCCC...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGCTCCTGTGAGCTGTTaGCACCAAACCAGAAGGCCC +
Preference number: 2 (lower is better)
Translates to: PGDRGELQAAVTQPLALDAPVSC*HQTRRP
Trigger: GGGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGC...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCGCTCTGAGTAGCCTGTaGCCTGTCTTGAGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: VQGRVGITSASAQWPGSPALSSL*PVLSSP
Trigger: AGGAGAGCTCAAGACAGGGCACAGGCTACTCAGAGC...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCACGTCCCCGCCTCCTaGTCATGCCGTCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQHVPAS*SCRPWP
Trigger: TGGCCAGGGACGGCATGAGCAGGAGGCGGGGACGTG...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCCACGTCCCCGCCTCCTaGTCATGCCGTCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSHVPAS*SCRPWP
Trigger: TGGCCAGGGACGGCATGAGCAGGAGGCGGGGACGTG...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR GCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAAGGAGGGCATGTGGATaGCTGCATCCTGGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQRRACG*LHPGLV
Trigger: CACCAGGCCAGGATGCAGGCATCCACATGCCCTCCT...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCGAAGGGAGTGGACTCTaGCCAAGGGCCCAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGEGSGL*PRAQLH
Trigger: GTGCAGCTGGGCCCTTGGCCAGAGTCCACTCCCTTC...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTCTTaGGGAGAGTGGCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: QTVPLAQARQGSMLRHLETWRPS*GEWQGP
Trigger: GGGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGT...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGGGGCCCCTCAGCTCTaGGTAGCCTGTGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEGAPQL*VACALS
Trigger: AGACAGGGCACAGGCTACTCAGAGCTGAGGGGCCCC...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGGGGGCCCCTCAGCTCTaGGTAGCCTGTGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELGAPQL*VACALS
Trigger: AGACAGGGCACAGGCTACTCAGAGCTGAGGGGCCCC...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR GCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCCCGCCTCCTGCTCATaGCGTCCCTGGCCACATGGC +
Preference number: 2 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCEPASCS*RPWPHG
Trigger: GCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGG...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR GCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCCACGTCCCCGCCTCCTaGTCATGCCGTCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: EGPHGSRSCELLTPNQKAHVPAS*SCRPWP
Trigger: TGGCCAGGGACGGCATGAGCAGGAGGCGGGGACGTG...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGAAGGGAGTGGACTCTaGCCAAGGGCCCAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: LAQARQGSMLRHLETWRPEGSGL*PRAQLH
Trigger: GTGCAGCTGGGCCCTTGGCCAGAGTCCACTCCCTTC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCAGCCAGGAAGGGAGTaGACTCTGGCCAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAQPGRE*TLAKGP
Trigger: TGGGCCCTTGGCCAGAGTCCACTCCCTTCCTGGCTG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATACATGGAGGCCCTCTTaGGGAGAGTGGCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHTWRPS*GEWQGP
Trigger: GGGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGT...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCACCTCGAAACATaGAGGCCCTCTTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: TEACPGKGGHHLGQCSVARHLET*RPSWGE
Trigger: CTCTCCCCAAGAGGGCCTCCATGTTTCGAGGTGCCT...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCCGTCCCTGGCCACATaGCCAGCACGTGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCEPSLAT*PARGSQ
Trigger: CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGG...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR CAA 90 bp GGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTaGAGGCACCTCGAAACATGGAGGCCCTCTTGGGGAGAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: GVQTVPLAQARQGSM*RHLETWRPSWGEWQ
Trigger: CTGCCACTCTCCCCAAGAGGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCCTCCCGGGTCACCTTaGCCCCTTCCAGTTCATGAG +
Preference number: 2 (lower is better)
Translates to: APSPGQARLHVEAPRNMEPPGSP*PLPVHE
Trigger: CTCATGAACTGGAAGGGGTCAAGGTGACCCGGGAGG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCCTCCCGGGTCACCTTaGCCCCTTCCAGTTCATGAG +
Preference number: 2 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDPPGSP*PLPVHE
Trigger: CTCATGAACTGGAAGGGGTCAAGGTGACCCGGGAGG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAGCCTGTGCCCTGTCTTaGGCTCTCCTCCCGGGTCAC +
Preference number: 2 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLACALS*ALLPGH
Trigger: GTGACCCGGGAGGAGAGCTCAAGACAGGGCACAGGC...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACATGAGCTGCTCGGGGTaGCACAGCCAGGAAGGGAGT +
Preference number: 2 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNMSCSG*HSQEGS
Trigger: ACTCCCTTCCTGGCTGTGTCACCCCGAGCAGCTCAT...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGACCTCCATGGTGGATaGGCTGCTCGGGGTGACACA +
Preference number: 2 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEDLHGG*AARGDT
Trigger: TGTGTCACCCCGAGCAGCTCATCCACCATGGAGGTC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGTGGTTCACGCTCCTGTaGGCTGTTGACACCAAACCA +
Preference number: 2 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRWFTLL*AVDTKP
Trigger: TGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCA...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCCCAGGTTTAGGAAAATaGAGACAGGGAGCTGATGGG +
Preference number: 2 (lower is better)
Translates to: VQGRVGITSASAQWPGSPPGLGK*RQGADG
Trigger: CCCATCAGCTCCCTGTCTTCATTTTCCTAAACCTGG...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGGGGAGGGAGAGCTTCTaGAGCCTCGTCCCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCEGRESF*SLVPGS
Trigger: GGACCCTGGGACGAGGCTGCAGAAGCTCTCCCTCCC...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATGAAGGGAGTGGACTCTaGCCAAGGGCCCAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHEGSGL*PRAQLH
Trigger: GTGCAGCTGGGCCCTTGGCCAGAGTCCACTCCCTTC...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGCAGCCAGGAAGGGAGTaGACTCTGGCCAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELQPGRE*TLAKGP
Trigger: TGGGCCCTTGGCCAGAGTCCACTCCCTTCCTGGCTG...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATCAGCCAGGAAGGGAGTaGACTCTGGCCAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHQPGRE*TLAKGP
Trigger: TGGGCCCTTGGCCAGAGTCCACTCCCTTCCTGGCTG...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTaGCCCTGGACGTGTCAGGAA +
Preference number: 2 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQPSHSP*PWTCQE
Trigger: TTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGG...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR CAA 90 bp CAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTCTaGGGGAGAGTGGCAGGGCCCCTTCCTCACAGACATAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: QARLHVEAPRNMEAL*GRVAGPLPHRHRPE
Trigger: CTCAGGCCTATGTCTGTGAGGAAGGGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGATGAGCTGCTCGGGGTaGCACAGCCAGGAAGGGAGT +
Preference number: 2 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMMSCSG*HSQEGS
Trigger: ACTCCCTTCCTGGCTGTGTCACCCCGAGCAGCTCAT...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGACCTCCATGGTGGATaGGCTGCTCGGGGTGACACA +
Preference number: 2 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMDLHGG*AARGDT
Trigger: TGTGTCACCCCGAGCAGCTCATCCACCATGGAGGTC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR TCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCGACCTCCATGGTGGATaGGCTGCTCGGGGTGACACA +
Preference number: 2 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSDLHGG*AARGDT
Trigger: TGTGTCACCCCGAGCAGCTCATCCACCATGGAGGTC...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR TCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATGCCCTCTGCGTCTCTTaGCAGGCCTGGGCTTTGTCT +
Preference number: 2 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHALCVS*QAWALS
Trigger: AGACAAAGCCCAGGCCTGTCAAGAGACGCAGAGGGC...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCACTCTCCGGGGAACTTaGCTCAGGCCAATGACCTCC +
Preference number: 2 (lower is better)
Translates to: LAQARQGSMLRHLETWRPTLRGT*LRPMTS
Trigger: GGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGT...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACTCTCCGGGGAACTTaGCTCAGGCCAATGACCTCC +
Preference number: 2 (lower is better)
Translates to: QTVPLAQARQGSMLRHLETLRGT*LRPMTS
Trigger: GGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGT...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGAGCCGTGAGGGGCACTaGGTCCACCAAACCCCATCA +
Preference number: 2 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQSREGH*VHQTPS
Trigger: TGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCT...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGAGCCGTGAGGGGCACTaGGTCCACCAAACCCCATCA +
Preference number: 2 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELSREGH*VHQTPS
Trigger: TGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCGCTTGGGGACGATGCTaGAGCCCAGGTTTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAAWGRC*SPGLGK
Trigger: TTTTCCTAAACCTGGGCTCCAGCATCGTCCCCAAGC...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCCAAACCCCATCATGTaGAGGGCCCAGGAACAGCCT +
Preference number: 2 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRPNPIM*RAQEQP
Trigger: AGGCTGTTCCTGGGCCCTGCACATGATGGGGTTTGG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR GCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCAAACCCCATCATGTaGAGGGCCCAGGAACAGCCT +
Preference number: 2 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQPNPIM*RAQEQP
Trigger: AGGCTGTTCCTGGGCCCTGCACATGATGGGGTTTGG...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGCCAAACCCCATCATGTaGAGGGCCCAGGAACAGCCT +
Preference number: 2 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELPNPIM*RAQEQP
Trigger: AGGCTGTTCCTGGGCCCTGCACATGATGGGGTTTGG...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCTCTGAGTAGCCTGTaGCCTGTCTTGAGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: APSPGQARLHVEAPRNMEALSSL*PVLSSP
Trigger: AGGAGAGCTCAAGACAGGGCACAGGCTACTCAGAGC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGCTCTGAGTAGCCTGTaGCCTGTCTTGAGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: LAQARQGSMLRHLETWRPALSSL*PVLSSP
Trigger: AGGAGAGCTCAAGACAGGGCACAGGCTACTCAGAGC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGGAACAGCCTGAGTCCTaGCCAGGCTCAGGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: SGVQTVPLAQARQGSMLREQPES*PGSGER
Trigger: TCTCTCTCCTGAGCCTGGCCAGGACTCAGGCTGTTC...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCAGGCACCTCGAAACATaGAGGCCCTCTTGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSRHLET*RPSWGE
Trigger: CTCTCCCCAAGAGGGCCTCCATGTTTCGAGGTGCCT...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTCCCTGGGGCCAACCCTaGCAGGGGCCCTCTGCGTCT +
Preference number: 2 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGPWGQP*QGPSAS
Trigger: AGACGCAGAGGGCCCCTGCCAGGGTTGGCCCCAGGG...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR TCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCACCTCCCGGGTCACCTTaGCCCCTTCCAGTTCATGAG +
Preference number: 2 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAPPGSP*PLPVHE
Trigger: CTCATGAACTGGAAGGGGTCAAGGTGACCCGGGAGG...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR GCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTTCATGAGGTCATCTaGAGCAGACTTGCGGCAGCC +
Preference number: 2 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEVHEVI*SRLAAA
Trigger: GGCTGCCGCAAGTCTGCTGCAGATGACCTCATGAAC...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGGTTCATGAGGTCATCTaGAGCAGACTTGCGGCAGCC +
Preference number: 2 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELVHEVI*SRLAAA
Trigger: GGCTGCCGCAAGTCTGCTGCAGATGACCTCATGAAC...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR GCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGTTCATGAGGTCATCTaGAGCAGACTTGCGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMVHEVI*SRLAAA
Trigger: GGCTGCCGCAAGTCTGCTGCAGATGACCTCATGAAC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR GCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCACTCTCCGGGGAACTTaGCTCAGGCCAATGACCTCC +
Preference number: 2 (lower is better)
Translates to: EGPHGSRSCELLTPNQKATLRGT*LRPMTS
Trigger: GGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGT...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR GCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGACTCTCCGGGGAACTTaGCTCAGGCCAATGACCTCC +
Preference number: 2 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCETLRGT*LRPMTS
Trigger: GGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGT...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAAGAAGCCCTGGTTTCTaGGGGGAACGTCTATGGACT +
Preference number: 2 (lower is better)
Translates to: QTVPLAQARQGSMLRHLERSPGF*GERLWT
Trigger: AGTCCATAGACGTTCCCCCCAGAAACCAGGGCTTCT...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCAGAAGCCCTGGTTTCTaGGGGGAACGTCTATGGACT +
Preference number: 2 (lower is better)
Translates to: LAQARQGSMLRHLETWRPRSPGF*GERLWT
Trigger: AGTCCATAGACGTTCCCCCCAGAAACCAGGGCTTCT...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCAGAAGCCCTGGTTTCTaGGGGGAACGTCTATGGACT +
Preference number: 2 (lower is better)
Translates to: PSPGQARLHVEAPRNMEARSPGF*GERLWT
Trigger: AGTCCATAGACGTTCCCCCCAGAAACCAGGGCTTCT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGCCGTGAGGGGCACTaGGTCCACCAAACCCCATCA +
Preference number: 2 (lower is better)
Translates to: EFILTVRSSDSAPSPGQASREGH*VHQTPS
Trigger: TGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCT...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGCCCTGGGGCCAACCCTaGCAGGGGCCCTCTGCGTCT +
Preference number: 2 (lower is better)
Translates to: RPEMADLMSWVLPRSPPEPWGQP*QGPSAS
Trigger: AGACGCAGAGGGCCCCTGCCAGGGTTGGCCCCAGGG...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTGGGAGGGAGAGCTTCTaGAGCCTCGTCCCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPGRESF*SLVPGS
Trigger: GGACCCTGGGACGAGGCTGCAGAAGCTCTCCCTCCC...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGAGAAGCCCTGGTTTCTaGGGGGAACGTCTATGGACT +
Preference number: 2 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRRSPGF*GERLWT
Trigger: AGTCCATAGACGTTCCCCCCAGAAACCAGGGCTTCT...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGGAAGGGAGTGGACTCTaGCCAAGGGCCCAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQEGSGL*PRAQLH
Trigger: GTGCAGCTGGGCCCTTGGCCAGAGTCCACTCCCTTC...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGCCGTCCCTGGCCACATaGCCAGCACGTGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RPEMADLMSWVLPRSPPEPSLAT*PARGSQ
Trigger: CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGG...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCGCAGATTTAATGTCTTaGGTTTTACCACGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: LSREGWASPRPVLSGQAAADLMS*VLPRSP
Trigger: AGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGCCTCCCGGGTCACCTTaGCCCCTTCCAGTTCATGAG +
Preference number: 2 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQPPGSP*PLPVHE
Trigger: CTCATGAACTGGAAGGGGTCAAGGTGACCCGGGAGG...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGGACCTCCATGGTGGATaGGCTGCTCGGGGTGACACA +
Preference number: 2 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQDLHGG*AARGDT
Trigger: TGTGTCACCCCGAGCAGCTCATCCACCATGGAGGTC...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCACGGAGTTTATCCTaGCAGTCAGGAGTTCAGACA +
Preference number: 2 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQPRSLS*QSGVQT
Trigger: TGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGG...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR TCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATGGTTCACGCTCCTGTaGGCTGTTGACACCAAACCA +
Preference number: 2 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLWFTLL*AVDTKP
Trigger: TGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCA...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR GCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCGTTCATGAGGTCATCTaGAGCAGACTTGCGGCAGCC +
Preference number: 2 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCVHEVI*SRLAAA
Trigger: GGCTGCCGCAAGTCTGCTGCAGATGACCTCATGAAC...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR TCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTGCCCTCTGCGTCTCTTaGCAGGCCTGGGCTTTGTCT +
Preference number: 2 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPALCVS*QAWALS
Trigger: AGACAAAGCCCAGGCCTGTCAAGAGACGCAGAGGGC...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR GCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTCCAAACCCCATCATGTaGAGGGCCCAGGAACAGCCT +
Preference number: 2 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGPNPIM*RAQEQP
Trigger: AGGCTGTTCCTGGGCCCTGCACATGATGGGGTTTGG...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAGCAGATTTAATGTCTTaGGTTTTACCACGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLADLMS*VLPRSP
Trigger: AGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGGCAGATTTAATGTCTTaGGTTTTACCACGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQADLMS*VLPRSP
Trigger: AGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR CCA 72 bp TCTGCAGCCTCGTCCCAGGGTCCCTGGGGCCAACCCTaGCAGGGGCCCTCTGCGTCTCTTGACAGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: SAASSQGPWGQP*QGPSASLDRPG
Trigger: CCCAGGCCTGTCAAGAGACGCAGAGGGCCCCTGCCAGGGTTGGCCCCAGGGACCCTGGGACGAGGCTGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR CCA 72 bp CGTCCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATaGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: RPRLLLMPSLAT*PARGSQGVGRE
Trigger: CTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CAA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGAACATGGAGGCCCTCTaGGGGAGAGTGGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: PRLLLMPSLATWPARGSQNMEAL*GRVAGP
Trigger: GGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGTT...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CAA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGAACATGGAGGCCCTCTaGGGGAGAGTGGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: AVPGHMASTWLPGSREGENMEAL*GRVAGP
Trigger: GGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGTT...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR GCA 72 bp AAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATaGCGTCCCTGGCCACATGGCCAGCACGTGGCTCCC +
Preference number: 3 (lower is better)
Translates to: KPEGPHVPASCS*RPWPHGQHVAP
Trigger: GGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CAA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGACTCTCCGGGGAACTaGCCTCAGGCCAATGACCTC +
Preference number: 3 (lower is better)
Translates to: PRLLLMPSLATWPARGSQDSPGN*PQANDL
Trigger: GAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CAA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCGGTCAGAGGAGAAACTaGGGGGTAGGGCTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: VQGRVGITSASAQWPGSPGQRRN*GVGLRG
Trigger: GCCCCTCAGCCCTACCCCCAAGTTTCTCCTCTGACC...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR GCA 72 bp GACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTaGTCATGCCGTCCCTGGCCACATGGCCAGCACGTG +
Preference number: 3 (lower is better)
Translates to: DTKPEGPHVPAS*SCRPWPHGQHV
Trigger: CACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR CCA 72 bp CCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTaGCTCCCAGGGAGTAGGGAGGGAGAGCTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: PAHAVPGHMAST*LPGSREGELLQ
Trigger: CTGCAGAAGCTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR CCA 72 bp CACCACCACGCAGGGGAAGCCAAGGAGGAGGGCATGTaGATGCCTGCATCCTGGCCTGGTGGGCTTGGGGAC +
Preference number: 3 (lower is better)
Translates to: HHHAGEAKEEGM*MPASWPGGLGD
Trigger: GTCCCCAAGCCCACCAGGCCAGGATGCAGGCATCCACATGCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CAA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGACTCTCCGGGGAACTaGCCTCAGGCCAATGACCTC +
Preference number: 3 (lower is better)
Translates to: PGDRGELQAAVTQPLALDDSPGN*PQANDL
Trigger: GAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTC...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR CCA 72 bp GAAGCCAAGGAGGAGGGCATGTGGATGCCTGCATCCTaGCCTGGTGGGCTTGGGGACGATGCTGGAGCCCAG +
Preference number: 3 (lower is better)
Translates to: EAKEEGMWMPAS*PGGLGDDAGAQ
Trigger: CTGGGCTCCAGCATCGTCCCCAAGCCCACCAGGCCAGGATGCAGGCATCCACATGCCCTCCTCCTTGGCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR TCA 72 bp CTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTaGCACCAAACCAGAAGGCCCCCACGTCCCCGCCTC +
Preference number: 3 (lower is better)
Translates to: LRALMVHAPVSC*HQTRRPPRPRL
Trigger: GAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR CCA 72 bp GGAGGAGGGCATGTGGATGCCTGCATCCTGGCCTGGTaGGCTTGGGGACGATGCTGGAGCCCAGGTTTAGGA +
Preference number: 3 (lower is better)
Translates to: GGGHVDACILAW*AWGRCWSPGLG
Trigger: TCCTAAACCTGGGCTCCAGCATCGTCCCCAAGCCCACCAGGCCAGGATGCAGGCATCCACATGCCCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CAA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGAACATGGAGGCCCTCTaGGGGAGAGTGGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQNMEAL*GRVAGP
Trigger: GGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGTT...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CAA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCGACTCTCCGGGGAACTaGCCTCAGGCCAATGACCTC +
Preference number: 3 (lower is better)
Translates to: PSPGQARLHVEAPRNMEADSPGN*PQANDL
Trigger: GAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTC...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR CCA 72 bp GGGGACAAGGGGGTGGCTAGAGAGCTTTGGGTCAGGTaGAAGACAGAGGCCTGTCCAGGGAAGGGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: GDKGVARELWVR*KTEACPGKGGH
Trigger: ATGCCCACCCTTCCCTGGACAGGCCTCTGTCTTCCACCTGACCCAAAGCTCTCTAGCCACCCCCTTGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CAA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCAGGCAAGGCTCCATGTaGAGGCACCTCGAAACATGG +
Preference number: 3 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGRQGSM*RHLETW
Trigger: CCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCT...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR TCA 72 bp GGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATaGGCTGCTCGGGGTGACACAGCCAGGAAGGGAGTG +
Preference number: 3 (lower is better)
Translates to: GNLPQANDLHGG*AARGDTARKGV
Trigger: CACTCCCTTCCTGGCTGTGTCACCCCGAGCAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
3UTR-3UTR CAA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCGACTCTCCGGGGAACTaGCCTCAGGCCAATGACCTC +
Preference number: 3 (lower is better)
Translates to: EGPHGSRSCELLTPNQKADSPGN*PQANDL
Trigger: GAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTC...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CAA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCTGTCAGGAACTTTATTaGTGGAAAGCACAGAAGAGC +
Preference number: 3 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGCQELY*WKAQKS
Trigger: GCTCTTCTGTGCTTTCCACAAATAAAGTTCCTGACA...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CAA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCAGGCAAGGCTCCATGTaGAGGCACCTCGAAACATGG +
Preference number: 3 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCRQGSM*RHLETW
Trigger: CCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCT...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CAA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAATGTCAGGAACTTTATTaGTGGAAAGCACAGAAGAGC +
Preference number: 3 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQCQELY*WKAQKS
Trigger: GCTCTTCTGTGCTTTCCACAAATAAAGTTCCTGACA...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR TCA 72 bp TTTGTCTGGGCTCCTGTACCCCCACGGAGTTTATCCTaGCAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAG +
Preference number: 3 (lower is better)
Translates to: FVWAPVPPRSLS*QSGVQTVPLAQ
Trigger: CTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCCAGACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR-3UTR CAA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTGACTCTCCGGGGAACTaGCCTCAGGCCAATGACCTC +
Preference number: 3 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGDSPGN*PQANDL
Trigger: GAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTC...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
3UTR CCA 72 bp GAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTaGACGTGTCAGGAACTTTATTTGTGGAAAGCACAG +
Preference number: 3 (lower is better)
Translates to: ENFRQPSHSPWP*TCQELYLWKAQ
Trigger: CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR-3UTR CAA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGAGGCAAGGCTCCATGTaGAGGCACCTCGAAACATGG +
Preference number: 3 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQRQGSM*RHLETW
Trigger: CCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCT...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
3UTR CCA 72 bp ATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTaGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAA +
Preference number: 3 (lower is better)
Translates to: IEENFRQPSHSP*PWTCQELYLWK
Trigger: TTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
CDS-3UTR TCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCGTCCGCCTCCGAGCTaGAGCCGCTGGCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGRPPPS*SRWPAA
Trigger: CGCTGCGGGCCAGCGGCTTCAGCTCGGAGGCGGACG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGCGTCCGCCTCCGAGCTaGAGCCGCTGGCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQRPPPS*SRWPAA
Trigger: CGCTGCGGGCCAGCGGCTTCAGCTCGGAGGCGGACG...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGCCTCCAGGGCGAGCTaGAGGCAGGTGGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGASRAS*RQVVFP
Trigger: GGGGAAGACCACCTGCCTGCAGCTCGCCCTGGAGGC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGCCCTGGGGCCAACCCTaGCAGGGGCCCTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQPWGQP*QGPSAS
Trigger: AGACGCAGAGGGCCCCTGCCAGGGTTGGCCCCAGGG...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACTGGCCACCTGGGCAATaGCGTCGGCCACGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDWPPGQ*RRPRGP
Trigger: CGGGCCGCGTGGCCGACGTCATTGCCCAGGTGGCCA...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCCCACCACGGGTGCGGTaGAGAAGGCACGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGPPRVR*RRHGRG
Trigger: CCCGCGCCCGTGCCTTCTTCACCGCACCCGTGGTGG...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGGGGCCCCTCAGCTCTaGGTAGCCTGTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGGAPQL*VACALS
Trigger: AGACAGGGCACAGGCTACTCAGAGCTGAGGGGCCCC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
71% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGGCAGGTTGGCCACCTaGGCAATGACGTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGGRLAT*AMTSAT
Trigger: CGTGGCCGACGTCATTGCCCAGGTGGCCAACCTGCC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGCAGGCCCCTGTGGTCTaGGCCACCTTGACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGQAPVV*ATLTRP
Trigger: AGGCCTGGTCAAGGTGGCTCAGACCACAGGGGCCTG...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAACCACCACGGGTGCGGTaGAGAAGGCACGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQPPRVR*RRHGRG
Trigger: CCCGCGCCCGTGCCTTCTTCACCGCACCCGTGGTGG...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGAGTCCAGAGAGAGGATaGCGCGCCCGGGGTACAGCG +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQSPERG*RARGTA
Trigger: CGCTGTACCCCGGGCGCGTCATCCTCTCTCTGGACT...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGTGGGTCCGAAGCAGCTaGGGCTCCCGCGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRWVRSS*GSRAHA
Trigger: TGCGTGGGCGCGGGAGCCTCAGCTGCTTCGGACCCA...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCTGGGTCCGAAGCAGCTaGGGCTCCCGCGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGWVRSS*GSRAHA
Trigger: TGCGTGGGCGCGGGAGCCTCAGCTGCTTCGGACCCA...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACCGCGGCGGTGGACAGTaGCCCAGGTGGCGACTCCGA +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDRGGGQ*PRWRLR
Trigger: TCGGAGTCGCCACCTGGGGCACTGTCCACCGCCGCG...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGAGGGAGGCCAACCTCTaGTCCATGGAGCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGREANL*SMEPDL
Trigger: GAGGTCGGGCTCCATGGAGCAGAGGTTGGCCTCCCT...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCCCCGCCTCCTGCTCATaGCGTCCCTGGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPPASCS*RPWPHG
Trigger: GCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGG...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGCATCACCTCGGCCAGTaGTCAGTGGCCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGHHLGQ*SVARQP
Trigger: GGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATG...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAAGGCCCTCGCGGCGGTaGACAGTGCCCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQRPSRR*TVPQVA
Trigger: CGCCACCTGGGGCACTGTCCACCGCCGCGAGGGCCT...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGACCCCGTACTGGCCGTaGGTCCCGTCGTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGETPYWP*VPSSTR
Trigger: CCTCGTGGACGACGGGACCCACGGCCAGTACGGGGT...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCACAGGGGGTGCCGTTaGTGGTGGCGTTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGHRGCR*WWRCRW
Trigger: CCATCGACAACGCCACCACCAACGGCACCCCCTGTG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGCGAGCTGCAGGCAGGTaGTCTTCCCCCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGERAAGR*SSPRPR
Trigger: CCGAGGCCTGGGGGAAGACCACCTGCCTGCAGCTCG...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGACATGGAGGCCCTCTTaGGGAGAGTGGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGTWRPS*GEWQGP
Trigger: GGGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGT...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGCCCTGGGGCCAACCCTaGCAGGGGCCCTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRPWGQP*QGPSAS
Trigger: AGACGCAGAGGGCCCCTGCCAGGGTTGGCCCCAGGG...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGCCTGCATCCTGGCCTaGTGGGCTTGGGGACGATGC +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQACILA*WAWGRC
Trigger: GCATCGTCCCCAAGCCCACCAGGCCAGGATGCAGGC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGTGCCGGGCATTCACGTaGTACTGTCGCCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGCRAFT*YCRPAP
Trigger: AGGAGCCGGGCGACAGTACCACGTGAATGCCCGGCA...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621064.1
CDS-3UTR TCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGCGCCTACCTGCTTCATaGCGCCGGTGTGGGACCCCC +
Preference number: 4 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRRLPAS*RRCGTP
Trigger: GGGGGTCCCACACCGGCGTCATGAAGCAGGTAGGCG...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCCCTGGAAGTGGACGCTaGCGGCCACCGTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPPGSGR*RPPSRS
Trigger: GGATCGAGACGGTGGCCGTCAGCGTCCACTTCCAGG...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGACCTCCATGGTGGATaGGCTGCTCGGGGTGACACA +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGDLHGG*AARGDT
Trigger: TGTGTCACCCCGAGCAGCTCATCCACCATGGAGGTC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGACCTGGGCCACGTGGTaGATCTGCAGCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGTWATW*ICSLLW
Trigger: CCACAGCAAGCTGCAGATGCACCACGTGGCCCAGGT...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300481.13
CDS-3UTR GCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGGGAGGCCAACCTCTaGTCCATGGAGCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGREANL*SMEPDL
Trigger: GAGGTCGGGCTCCATGGAGCAGAGGTTGGCCTCCCT...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGTGCCCTGGAAGGTGTaGGGCTTGGTAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQVPWKV*GLVASS
Trigger: GGAGGAGGCTACCAAGCCCCACACCTTCCAGGGCAC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGGTGGTAGATCACGCTaGAGGGCGTGTCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGGGRSR*RACPGR
Trigger: TCTCCCAGGACACGCCCTCCAGCGTGATCTACCACC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCCGGGGAAGCTGCCCGTaGGATGGATCAGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGRGSCP*DGSGPR
Trigger: GCGAGGGCCTGATCCATCCCACGGGCAGCTTCCCCG...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGAGGGGGTGCCGTTGGTaGTGGCGTTGTCGATGGTGT +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGRGCRW*WRCRWC
Trigger: ACACCATCGACAACGCCACCACCAACGGCACCCCCT...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCAGCTCCCGCAGCACCTaGGCCACGTGGTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPSSRST*ATWCIC
Trigger: GCAGATGCACCACGTGGCCCAGGTGCTGCGGGAGCT...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCAGGAGGGCACAGGCTaGAAGTCCACCATGAGCACG +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGQEGTG*KSTMST
Trigger: CGTGCTCATGGTGGACTTCCAGCCTGTGCCCTCCTG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGTTCTGGTCCTGGAAGTaGACGCTGACGGCCACCGTC +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGFWSWK*TLTATV
Trigger: GACGGTGGCCGTCAGCGTCCACTTCCAGGACCAGAA...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGTGCATCCTGGCCTGGTaGGCTTGGGGACGATGCTGG +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGCILAW*AWGRCW
Trigger: CCAGCATCGTCCCCAAGCCCACCAGGCCAGGATGCA...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTGGCCACCTGGGCAATaGCGTCGGCCACGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAWPPGQ*RRPRGP
Trigger: CGGGCCGCGTGGCCGACGTCATTGCCCAGGTGGCCA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGGATAAAGCGGCTGCGTaGAGTCCCCCAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGEDKAAA*SPPAAP
Trigger: GGGAGCTGCTGGGGGACTTCACGCAGCCGCTTTATC...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCGATAAAGCGGCTGCGTaGAGTCCCCCAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPDKAAA*SPPAAP
Trigger: GGGAGCTGCTGGGGGACTTCACGCAGCCGCTTTATC...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGTCTGCCCGAAGATGGTaGGGTAGGAGTGGTAGACGG +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGSARRW*GRSGRR
Trigger: CCGTCTACCACTCCTACCTCACCATCTTCGGGCAGA...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGCGTCCGCCTCCGAGCTaGAGCCGCTGGCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMRPPPS*SRWPAA
Trigger: CGCTGCGGGCCAGCGGCTTCAGCTCGGAGGCGGACG...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGCCTCCCGGGTCACCTTaGCCCCTTCCAGTTCATGAG +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGPPGSP*PLPVHE
Trigger: CTCATGAACTGGAAGGGGTCAAGGTGACCCGGGAGG...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCGGGGCCCCTCAGCTCTaGGTAGCCTGTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGGAPQL*VACALS
Trigger: AGACAGGGCACAGGCTACTCAGAGCTGAGGGGCCCC...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCAGCCCCTCGCCTaGTGGCCAAGGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEAQPLA*WPRVPG
Trigger: CCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGCCCAGCCCCTCGCCTaGTGGCCAAGGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPAQPLA*WPRVPG
Trigger: CCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGACCACGTTCCCCTCCTaGGGGCCCTCATGGTTCACG +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGETTFPS*GPSWFT
Trigger: CGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGT...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGCGATGGTGTGCAACGTaGCCGGGCCGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKERWCAT*PGRPPA
Trigger: TGCTGGAGGGCGGCCCGGGCACGTTGCACACCATCG...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGAGCCCAGATGATTCCTaGCAGCTCCCGACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGSPDDS*QLPTVL
Trigger: CAGAACCGTCGGGAGCTGGCAGGAATCATCTGGGCT...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGTTCCTTCAGGATCTTaGTGCAGGCCAAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGVPSGS*CRPRPL
Trigger: CAGCGGCCTTGGCCTGCAGCAAGATCCTGAAGGAAC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACGCGGGCCGCGGGGGTaGCCACATCCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLERGPRG*PHPAAS
Trigger: AGAGGCTGCAGGATGTGGGCACCCCCGCGGCCCGCG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGCGGGCCGCGGGGGTaGCCACATCCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEARGPRG*PHPAAS
Trigger: AGAGGCTGCAGGATGTGGGCACCCCCGCGGCCCGCG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGCTGTCTGGGCCACCTaGTCCTCCAGGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRAVWAT*SSREAN
Trigger: GTTGGCCTCCCTGGAGGAGCAGGTGGCCCAGACAGC...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGTCCTCACGATCCAGTaGAGGGCTTGGGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQVLTIQ*RAWAVW
Trigger: CCAGACAGCCCAAGCCCTGCACTGGATCGTGAGGAC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCGACGGCCAGTGCTCCTaGCGGAGGATCCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSREGWASPRPVLSGQAADGQCS*RRIRFS
Trigger: GCTGAAGCGGATCCTCCGGCAGGAGCACTGGCCGTC...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGTCGCATAGAGTGGGATaGGCCTGTCCACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQSHRVG*ACPPPA
Trigger: GGCAGGTGGTGGACAGGCGCATCCCACTCTATGCGA...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGAGCTGCAACCAGGCCTaGTGCCCTCAGGACAGTCCT +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQSCNQA*CPQDSP
Trigger: AGGACTGTCCTGAGGGCAGCAGGCCTGGTTGCAGCT...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGCTGCTTGTGCCTCTTaGCCGGAGTCTTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGAACAS*PESSGP
Trigger: TGGTCCTGAAGACTCCGGCCAAGAGGCACAAGCAGC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGTTCTGGTCCTGGAAGTaGACGCTGACGGCCACCGTC +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQFWSWK*TLTATV
Trigger: GACGGTGGCCGTCAGCGTCCACTTCCAGGACCAGAA...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGCCACCTGCCATCGGATaGAGGCCCCCGAGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEPPAIG*RPPSRR
Trigger: CCTGCGACTCGGGGGCCTCCATCCGATGGCAGGTGG...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACACATGGAGGCCCTCTTaGGGAGAGTGGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDTWRPS*GEWQGP
Trigger: GGGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGT...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGGGTGCCAGGGCACATTaGCACCACCACGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGEGARAH*HHHAGE
Trigger: TTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACC...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAACCAGGGTGTCTCCCATaGGGTCCATGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQPGCLP*GPWRPR
Trigger: ACGCGGCCGCCATGGACCCCATGGGAGACACCCTGG...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300482.9
3UTR CAA 72 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATaGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LHPEPLQGCQGT*APPRRGSQGGG
Trigger: CCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
CDS-3UTR TCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGTGGCCACCTGGGCAATaGCGTCGGCCACGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEWPPGQ*RRPRGP
Trigger: CGGGCCGCGTGGCCGACGTCATTGCCCAGGTGGCCA...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCTCCGGTAGCACTCGGTaGAGACCCCGATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPSGSTR*RPRWLC
Trigger: ACAGAGCCATCGGGGTCTTCACCGAGTGCTACCGGA...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACCCTCGGACACGCGGGTaGGCAGTTTCTGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDPRTRG*AVSGLS
Trigger: AGAGAGCCCAGAAACTGCTCACCCGCGTGTCCGAGG...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGCCACCACGGGTGCGGTaGAGAAGGCACGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEPPRVR*RRHGRG
Trigger: CCCGCGCCCGTGCCTTCTTCACCGCACCCGTGGTGG...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAATGGGTCCGAAGCAGCTaGGGCTCCCGCGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEWVRSS*GSRAHA
Trigger: TGCGTGGGCGCGGGAGCCTCAGCTGCTTCGGACCCA...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTTGGGTCCGAAGCAGCTaGGGCTCCCGCGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCWVRSS*GSRAHA
Trigger: TGCGTGGGCGCGGGAGCCTCAGCTGCTTCGGACCCA...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCCCTGGAAGTGGACGCTaGCGGCCACCGTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAPGSGR*RPPSRS
Trigger: GGATCGAGACGGTGGCCGTCAGCGTCCACTTCCAGG...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGCCCAGCCCCTCGCCTaGTGGCCAAGGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMAQPLA*WPRVPG
Trigger: CCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACCGCGGCGGTGGACAGTaGCCCAGGTGGCGACTCCGA +
Preference number: 4 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNRGGGQ*PRWRLR
Trigger: TCGGAGTCGCCACCTGGGGCACTGTCCACCGCCGCG...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCACTCGGCGGGGAAGCTaGCCGTGGGATGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVATRRGS*PWDGSG
Trigger: GCCTGATCCATCCCACGGGCAGCTTCCCCGCCGAGT...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGCGATTCCATGCCACTaGCAGTTTCAGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGAIPCH*QFQLVV
Trigger: GACCACCAGCTGAAACTGGCAGTGGCATGGAATCGC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCGCAGGCCAAGGCCGCTaGGATGCAGTCCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAAGQGR*DAVLAL
Trigger: CAGAGCCAGGACTGCATCGCAGCGGCCTTGGCCTGC...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGCGCGGGCCGCGGGGGTaGCCACATCCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMRGPRG*PHPAAS
Trigger: AGAGGCTGCAGGATGTGGGCACCCCCGCGGCCCGCG...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGAAGACCACCACGGGTaGGGTGAAGAAGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDEDHHG*GEEGTG
Trigger: GCCCGTGCCTTCTTCACCGCACCCGTGGTGGTCTTC...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCTGGATGAGGATGGCCTaGTTGGCCACCCCGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPWMRMA*LATPKD
Trigger: GTCCTTCGGGGTGGCCAAGCAGGCCATCCTCATCCA...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGGGAAGGCCGGCCTCTaGTGCGTCGCGTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDGKAGL*CVASLS
Trigger: CGAGAGCGACGCGACGCAGCAGAGGCCGGCCTTCCC...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCGCCCACGCAGTCCTGTaGGGCCCATGGGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAAHAVL*GPWGSL
Trigger: GAGAGAACCCCATGGGCCGCACAGGACTGCGTGGGC...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300481.13
CDS-3UTR GCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGCCCGAACTCAGCGGCTaGCTTCTGGAGGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGEPELSG*LLEEGL
Trigger: AAGACCCTCCTCCAGAAGGCAGCCGCTGAGTTCGGG...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGTTCATGAGGTCATCTaGAGCAGACTTGCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGVHEVI*SRLAAA
Trigger: GGCTGCCGCAAGTCTGCTGCAGATGACCTCATGAAC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGTGGGCTTGGGGACGATaGTGGAGCCCAGGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQWAWGR*WSPGLG
Trigger: TCCTAAACCTGGGCTCCAGCATCGTCCCCAAGCCCA...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCAGGAGGGCATGTGGATaGCTGCATCCTGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPRRACG*LHPGLV
Trigger: CACCAGGCCAGGATGCAGGCATCCACATGCCCTCCT...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCACCTGGGCCACGTGGTaGATCTGCAGGCGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPTWATW*ICRRGA
Trigger: GGCGCCCCGCCTGCAGATGCACCACGTGGCCCAGGT...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGAGGCCCTCGCGGCGGTaGACAGTGCCCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRRPSRR*TVPQVA
Trigger: CGCCACCTGGGGCACTGTCCACCGCCGCGAGGGCCT...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCATCTCCACCCCGTACTaGCCGTGGGTCCCGTCGTCC +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAISTPY*PWVPSS
Trigger: GGACGACGGGACCCACGGCCAGTACGGGGTGGAGAT...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGTGCAGCTGTCATCGTaGGGTGCAGATCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGVQLSS*GADLKA
Trigger: AGCCTTCAGATCTGCACCCCACGATGACAGCTGCAC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCAAACTTCATGTCCTTaGCCTCCAGGGCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGQTSCP*PPGRAA
Trigger: TGCAGCTCGCCCTGGAGGCCAAGGACATGAAGTTTG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGAGAGCCAGAGGTAGATaGCACACTCGCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQRARGR*HTRTRR
Trigger: CCTCCTGGTGCGAGTGTGCCATCTACCTCTGGCTCT...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGCTGCTTGTGCCTCTTaGCCGGAGTCTTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQAACAS*PESSGP
Trigger: TGGTCCTGAAGACTCCGGCCAAGAGGCACAAGCAGC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGGCTGCTTGTGCCTCTTaGCCGGAGTCTTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGAACAS*PESSGP
Trigger: TGGTCCTGAAGACTCCGGCCAAGAGGCACAAGCAGC...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCTCCTCCGCGGCCTTCTaGGAGGCCAGAGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGSSAAF*EARVGT
Trigger: CGTCCCCACTCTGGCCTCCCAGAAGGCCGCGGAGGA...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGTGCTCTTCCTGCAGATaGCTCCATCCTCGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGCSSCR*LHPRSA
Trigger: GGCGGAACGAGGATGGAGCCATCTGCAGGAAGAGCA...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGAAGGGAGTGGACTCTaGCCAAGGGCCCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRREGSGL*PRAQLH
Trigger: GTGCAGCTGGGCCCTTGGCCAGAGTCCACTCCCTTC...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCTGCTCATGCCGTCCCTaGCCACATGGCCAGCACGTG +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGCSCRP*PHGQHV
Trigger: CACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCA...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGTGCCAGGGCACATTaGCACCACCACGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRGARAH*HHHAGE
Trigger: TTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACC...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCTCTGGCTCAGGCCCGTaGAGACGATGTCGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LSREGWASPRPVLSGQAASGSGP*RRCRQR
Trigger: CCTTTGGCGACATCGTCTTCACGGGCCTGAGCCAGA...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCCAGTGCTGGGTCATaGGGTGGTAGATCACGCTGG +
Preference number: 4 (lower is better)
Translates to: LSREGWASPRPVLSGQAAPSAGS*GGRSRW
Trigger: CCAGCGTGATCTACCACCTCATGACCCAGCACTGGG...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCGCCTACCTGCTTCATaGCGCCGGTGTGGGACCCCC +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDRLPAS*RRCGTP
Trigger: GGGGGTCCCACACCGGCGTCATGAAGCAGGTAGGCG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCAGCTGCTGCTCAGGCTaGAGTCCCGCACCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPSCCSG*SPAPPR
Trigger: GCGAGGCGGTGCGGGACTTCAGCCTGAGCAGCAGCT...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGGATGGGGTCCATGGTaGAGGTCACATGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDGWGPW*RSHGLR
Trigger: CCTCAGGCCATGTGACCTTCACCATGGACCCCATCC...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACTCCGGTAGCACTCGGTaGAGACCCCGATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDSGSTR*RPRWLC
Trigger: ACAGAGCCATCGGGGTCTTCACCGAGTGCTACCGGA...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCGCCTGGATGCCCCCGTaGGACACAAACTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPAWMPP*DTNFMS
Trigger: GGACATGAAGTTTGTGTCTCACGGGGGCATCCAGGC...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCGCCTGTGCCCTGTCTTaGGCTCTCCTCCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGACALS*ALLPGH
Trigger: GTGACCCGGGAGGAGAGCTCAAGACAGGGCACAGGC...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGACCTCCATGGTGGATaGGCTGCTCGGGGTGACACA +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDDLHGG*AARGDT
Trigger: TGTGTCACCCCGAGCAGCTCATCCACCATGGAGGTC...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGCGCGGCGGTGGACAGTaGCCCAGGTGGCGACTCCGA +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELRGGGQ*PRWRLR
Trigger: TCGGAGTCGCCACCTGGGGCACTGTCCACCGCCGCG...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCGATGGTGTGCAACGTaGCCGGGCCGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMERWCAT*PGRPPA
Trigger: TGCTGGAGGGCGGCCCGGGCACGTTGCACACCATCG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAAGACAGTCAGCAGCTaGCGCCTCCGGACGATATCT +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGKTVSS*RLRTIS
Trigger: AGATATCGTCCGGAGGCGGCAGCTGCTGACTGTCTT...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGTCCACGCGATTCCATaGCACTGCCAGTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQVHAIP*HCQFQL
Trigger: CAGCTGAAACTGGCAGTGGCATGGAATCGCGTGGAC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGCGGGAAGGCCAGCATaGACAGGGTCACACGCCACA +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEAGRPA*TGSHAT
Trigger: TGTGGCGTGTGACCCTGTGCATGCTGGCCTTCCCGC...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCGGGGTGCCCACATCCTaGAGCCTCTTCTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGGVPTS*SLFSLK
Trigger: CTTCAGGGAGAAGAGGCTGCAGGATGTGGGCACCCC...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGGGGAAGGCCGGCCTCTaGTGCGTCGCGTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRGKAGL*CVASLS
Trigger: CGAGAGCGACGCGACGCAGCAGAGGCCGGCCTTCCC...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGAGCTTGTTCTTGAGCTaGTTGTGCCTCTTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGSLFLS*LCLLAG
Trigger: TCCGGCCAAGAGGCACAAGCAGCTCAAGAACAAGCT...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCCCCGAGTCGCAGGCGTaGAGGTTAGAGTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGPESQA*RLEFSL
Trigger: CAGGCTGAACTCTAACCTGCACGCCTGCGACTCGGG...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTCGCCTGTCCACCACCTaGCATCGGATGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCRLSTT*HRMEAP
Trigger: GGGGGCCTCCATCCGATGGCAGGTGGTGGACAGGCG...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACGCCTGTCCACCACCTaGCATCGGATGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLERLSTT*HRMEAP
Trigger: GGGGGCCTCCATCCGATGGCAGGTGGTGGACAGGCG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCTCGCATAGAGTGGGATaGGCCTGTCCACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LSREGWASPRPVLSGQAASHRVG*ACPPPA
Trigger: GGCAGGTGGTGGACAGGCGCATCCCACTCTATGCGA...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGGCTCTGAGTAGCCTGTaGCCTGTCTTGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGALSSL*PVLSSP
Trigger: AGGAGAGCTCAAGACAGGGCACAGGCTACTCAGAGC...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGACTCTCCGGGGAACTTaGCTCAGGCCAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGETLRGT*LRPMTS
Trigger: GGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGT...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCCGCCTCCTGCTCATaGCGTCCCTGGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAPASCS*RPWPHG
Trigger: GCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACACGTCCCCGCCTCCTaGTCATGCCGTCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEHVPAS*SCRPWP
Trigger: TGGCCAGGGACGGCATGAGCAGGAGGCGGGGACGTG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGTAGGGCTGAGGGGCTaGAGGACATCCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQVGLRG*RTSTGC
Trigger: GCAGCCTGTGGATGTCCTGCAGCCCCTCAGCCCTAC...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGTGGGCTTGGGGACGATaGTGGAGCCCAGGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGEWAWGR*WSPGLG
Trigger: TCCTAAACCTGGGCTCCAGCATCGTCCCCAAGCCCA...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGGCATGTGGATGCCTaGATCCTGGCCTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQGHVDA*ILAWWA
Trigger: AGCCCACCAGGCCAGGATGCAGGCATCCACATGCCC...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGTCCACCAGCACCTTCTaGAGCTTGCTGTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQSTSTF*SLLWNR
Trigger: CCTGTTCCACAGCAAGCTGCAGAAGGTGCTGGTGGA...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGAGGGGCAACCCGGCCTaGACTGTGTACGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMERGNPA*TVYGPW
Trigger: CCACGGGCCGTACACAGTGCAGGCCGGGTTGCCCCT...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGACAGCCTTGCAAACATaGGAGGGTGGTTACTGGAGC +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGTALQT*EGGYWS
Trigger: GCTCCAGTAACCACCCTCGCATGTTTGCAAGGCTGT...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS-3UTR CCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCCTGGAGGGCGTGTCCTaGGAGACTCGGACGTACTTT +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPLEGVS*ETRTYF
Trigger: AAAGTACGTCCGAGTCTCCCAGGACACGCCCTCCAG...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTCGGGGAAGCTGCCCGTaGGATGGATCAGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCRGSCP*DGSGPR
Trigger: GCGAGGGCCTGATCCATCCCACGGGCAGCTTCCCCG...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCGCCAGTTTCAGCTGGTaGTCCCAGTTCTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPASFSW*SQFSWP
Trigger: TGGCCACGAGAACTGGGACCACCAGCTGAAACTGGC...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGTGCAGCTGTCATCGTaGGGTGCAGATCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQVQLSS*GADLKA
Trigger: AGCCTTCAGATCTGCACCCCACGATGACAGCTGCAC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTCGAGCTGCAGGCAGGTaGTCTTCCCCCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCRAAGR*SSPRPR
Trigger: CCGAGGCCTGGGGGAAGACCACCTGCCTGCAGCTCG...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACGCGGCGGGGCGGCCGTaGTACTCCTCGATCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNAAGRP*YSSIRS
Trigger: TGACCTGATCGAGGAGTACCACGGCCGCCCCGCCGC...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGCGGCGGGGCGGCCGTaGTACTCCTCGATCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEAAGRP*YSSIRS
Trigger: TGACCTGATCGAGGAGTACCACGGCCGCCCCGCCGC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGCCCGACCTCTTCAGTaGGTCCAGGTCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEARPLQ*VQVQQV
Trigger: GACCTGCTGGACCTGGACCCACTGAAGAGGTCGGGC...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATTCTGGGAGGCCAGAGTaGGGACGTCCGCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDSGRPE*GRPPPS
Trigger: GCTCGGAGGCGGACGTCCCCACTCTGGCCTCCCAGA...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTCTGGGAGGCCAGAGTaGGGACGTCCGCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEASGRPE*GRPPPS
Trigger: GCTCGGAGGCGGACGTCCCCACTCTGGCCTCCCAGA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGTCCTCCGCGGCCTTCTaGGAGGCCAGAGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMESSAAF*EARVGT
Trigger: CGTCCCCACTCTGGCCTCCCAGAAGGCCGCGGAGGA...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTTCCTCCGCGGCCTTCTaGGAGGCCAGAGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCSSAAF*EARVGT
Trigger: CGTCCCCACTCTGGCCTCCCAGAAGGCCGCGGAGGA...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCCACCTGCCATCGGATaGAGGCCCCCGAGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDPPAIG*RPPSRR
Trigger: CCTGCGACTCGGGGGCCTCCATCCGATGGCAGGTGG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTCCACCTGCCATCGGATaGAGGCCCCCGAGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCPPAIG*RPPSRR
Trigger: CCTGCGACTCGGGGGCCTCCATCCGATGGCAGGTGG...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGAGGCACCTCGAAACATaGAGGCCCTCTTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGERHLET*RPSWGE
Trigger: CTCTCCCCAAGAGGGCCTCCATGTTTCGAGGTGCCT...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTCCGTCCCTGGCCACATaGCCAGCACGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCPSLAT*PARGSQ
Trigger: CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGG...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCCGTCCCTGGCCACATaGCCAGCACGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPPSLAT*PARGSQ
Trigger: CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGCTTGGGGACGATGCTaGAGCCCAGGTTTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGAWGRC*SPGLGK
Trigger: TTTTCCTAAACCTGGGCTCCAGCATCGTCCCCAAGC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCTGCATCCTGGCCTGGTaGGCTTGGGGACGATGCTGG +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVACILAW*AWGRCW
Trigger: CCAGCATCGTCCCCAAGCCCACCAGGCCAGGATGCA...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGTGGATGCCTGCATCCTaGCCTGGTGGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEWMPAS*PGGLGD
Trigger: GTCCCCAAGCCCACCAGGCCAGGATGCAGGCATCCA...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCCAGGGTGTCTCCCATaGGGTCCATGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPPGCLP*GPWRPR
Trigger: ACGCGGCCGCCATGGACCCCATGGGAGACACCCTGG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGCGTTGTACTGGATCGTaGACAGTGGCTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGRCTGS*TVAPGC
Trigger: ACACCCTGGAGCCACTGTCCACGATCCAGTACAACG...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGTCCTGTGCGGCCCATaGGGTTCAGGGGCAACCCGG +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDVLCGP*GSGATR
Trigger: CCGGGTTGCCCCTGAACCCCATGGGCCGCACAGGAC...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGTCCTGTGCGGCCCATaGGGTTCAGGGGCAACCCGG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPVLCGP*GSGATR
Trigger: CCGGGTTGCCCCTGAACCCCATGGGCCGCACAGGAC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCAGCTTTCCTCAGGGCTaGGGGCTCCATTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: LSREGWASPRPVLSGQAASFPQG*GLHSET
Trigger: GGTCTCAGAATGGAGCCCTCAGCCCTGAGGAAAGCT...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCGTAGCCTCCAGCTCTTaGAGAGGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGVASSS*RGCCCC
Trigger: GCAGCAACAGCAGCCTCTTCAAGAGCTGGAGGCTAC...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCCCCAGTGCTGGGTCATaGGGTGGTAGATCACGCTGG +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAPSAGS*GGRSRW
Trigger: CCAGCGTGATCTACCACCTCATGACCCAGCACTGGG...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACAGGCCCCTGTGGTCTaGGCCACCTTGACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEQAPVV*ATLTRP
Trigger: AGGCCTGGTCAAGGTGGCTCAGACCACAGGGGCCTG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCAGGCCCCTGTGGTCTaGGCCACCTTGACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPQAPVV*ATLTRP
Trigger: AGGCCTGGTCAAGGTGGCTCAGACCACAGGGGCCTG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGAGCTGCTGCTCAGGCTaGAGTCCCGCACCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELSCCSG*SPAPPR
Trigger: GCGAGGCGGTGCGGGACTTCAGCCTGAGCAGCAGCT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCACATCCACGTCCTGCTaGCCATCCTTGCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVATSTSC*PSLPSR
Trigger: CCGGGAAGGCAAGGATGGTCAGCAGGACGTGGATGT...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAACGTGGGGTGCAGATCTaGAGGCTTCCACTGCCACTC +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQRGVQI*RLPLPL
Trigger: GAGTGGCAGTGGAAGCCTTCAGATCTGCACCCCACG...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGAGTCCAGAGAGAGGATaGCGCGCCCGGGGTACAGCG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMESPERG*RARGTA
Trigger: CGCTGTACCCCGGGCGCGTCATCCTCTCTCTGGACT...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTGCACGGGGAAGCGCGTaGCAGGGCAGTTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCARGSA*QGSWGR
Trigger: TCTACCCCAACTGCCCTGTCACGCGCTTCCCCGTGC...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGTCCGCCTCCACCGCGTaGCCATGGGGTACAGCGTGT +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMESASTA*PWGTAC
Trigger: ACACGCTGTACCCCATGGTCACGCGGTGGAGGCGGA...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAATCCGCCTCCACCGCGTaGCCATGGGGTACAGCGTGT +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLESASTA*PWGTAC
Trigger: ACACGCTGTACCCCATGGTCACGCGGTGGAGGCGGA...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCCTGGAAGTGGACGCTaGCGGCCACCGTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPPGSGR*RPPSRS
Trigger: GGATCGAGACGGTGGCCGTCAGCGTCCACTTCCAGG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCGCCTGTGCCCTGTCTTaGGCTCTCCTCCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAACALS*ALLPGH
Trigger: GTGACCCGGGAGGAGAGCTCAAGACAGGGCACAGGC...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGTGGTTCACGCTCCTGTaGGCTGTTGACACCAAACCA +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQWFTLL*AVDTKP
Trigger: TGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCA...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGAGAGCCAGCCAGGCCTaGGATGGCAGATTTAATGTC +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQRASQA*DGRFNV
Trigger: GACATTAAATCTGCCATCTCAGGCCTGGCTGGCTCT...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCCAGGTTTAGGAAAATaGAGACAGGGAGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGPGLGK*RQGADG
Trigger: CCCATCAGCTCCCTGTCTTCATTTTCCTAAACCTGG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCACTCGGCGGGGAAGCTaGCCGTGGGATGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEATRRGS*PWDGSG
Trigger: GCCTGATCCATCCCACGGGCAGCTTCCCCGCCGAGT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCCGATGGTGTGCAACGTaGCCGGGCCGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSRWCAT*PGRPPA
Trigger: TGCTGGAGGGCGGCCCGGGCACGTTGCACACCATCG...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCGGTGCATCTGCAGCTTaGTGTGGAACAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSREGWASPRPVLSGQAAGASAA*CGTGRR
Trigger: CCTCCTGCCTGTTCCACAGCAAGCTGCAGATGCACC...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300481.13
CDS-3UTR GCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCAGCCCAGATGATTCCTaGCAGCTCCCGACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LSREGWASPRPVLSGQAASPDDS*QLPTVL
Trigger: CAGAACCGTCGGGAGCTGGCAGGAATCATCTGGGCT...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCAGGCCAAGGCCGCTaGGATGCAGTCCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEAGQGR*DAVLAL
Trigger: CAGAGCCAGGACTGCATCGCAGCGGCCTTGGCCTGC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGCAGGCCAAGGCCGCTaGGATGCAGTCCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDAGQGR*DAVLAL
Trigger: CAGAGCCAGGACTGCATCGCAGCGGCCTTGGCCTGC...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGGCCTCCAGGGCGAGCTaGAGGCAGGTGGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELASRAS*RQVVFP
Trigger: GGGGAAGACCACCTGCCTGCAGCTCGCCCTGGAGGC...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACCCTGCAGGTCAGCCCTaGCACGAAGAGCAAGATTGC +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDPAGQP*HEEQDC
Trigger: GCAATCTTGCTCTTCGTGGCAGGGCTGACCTGCAGG...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGCTTGTAGGGGTCGGTaGCATTGGGGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEACRGR*HWGCSA
Trigger: AGCACTGCAGCCCCAATGGCACCGACCCCTACAAGC...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGCTGTCTGGGCCACCTaGTCCTCCAGGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEAVWAT*SSREAN
Trigger: GTTGGCCTCCCTGGAGGAGCAGGTGGCCCAGACAGC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGACGGCCAGTGCTCCTaGCGGAGGATCCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEDGQCS*RRIRFS
Trigger: GCTGAAGCGGATCCTCCGGCAGGAGCACTGGCCGTC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGACGGCCAGTGCTCCTaGCGGAGGATCCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPDGQCS*RRIRFS
Trigger: GCTGAAGCGGATCCTCCGGCAGGAGCACTGGCCGTC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAATCAAAAGACGGCCAGTaGTCCTGCCGGAGGATCCGC +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQSKDGQ*SCRRIR
Trigger: GCGGATCCTCCGGCAGGAGCACTGGCCGTCTTTTGA...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTGGGAGGGAGAGCTTCTaGAGCCTCGTCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCGRESF*SLVPGS
Trigger: GGACCCTGGGACGAGGCTGCAGAAGCTCTCCCTCCC...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATCACGTCCCCGCCTCCTaGTCATGCCGTCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHHVPAS*SCRPWP
Trigger: TGGCCAGGGACGGCATGAGCAGGAGGCGGGGACGTG...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCATCACCTCGGCCAGTaGTCAGTGGCCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAHHLGQ*SVARQP
Trigger: GGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCTCCCACTGTGTGCCCTaGAAGGTGTGGGGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGSHCVP*KVWGLV
Trigger: TACCAAGCCCCACACCTTCCAGGGCACACAGTGGGA...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGCTGGACATGTTTCTTTaGGTCCCACTGTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQLDMFL*VPLCAL
Trigger: CAGGGCACACAGTGGGACCCAAAGAAACATGTCCAG...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGAAGCTGCCCGTGGGATaGATCAGGCCCTCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRKLPVG*IRPSRR
Trigger: CCGCCGCGAGGGCCTGATCCATCCCACGGGCAGCTT...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGACCCCGTACTGGCCGTaGGTCCCGTCGTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELTPYWP*VPSSTR
Trigger: CCTCGTGGACGACGGGACCCACGGCCAGTACGGGGT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGGCAGGTTGGCCACCTaGGCAATGACGTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPGRLAT*AMTSAT
Trigger: CGTGGCCGACGTCATTGCCCAGGTGGCCAACCTGCC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGCAAACTTCATGTCCTTaGCCTCCAGGGCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGEQTSCP*PPGRAA
Trigger: TGCAGCTCGCCCTGGAGGCCAAGGACATGAAGTTTG...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAATTGTCCACGGAGAGCTaGCCCCACCACACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQLSTES*PHHTLV
Trigger: GACCAAGGTGTGGTGGGGCCAGCTCTCCGTGGACAA...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCGGCGGGGCGGCCGTaGTACTCCTCGATCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEAAGRP*YSSIRS
Trigger: TGACCTGATCGAGGAGTACCACGGCCGCCCCGCCGC...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCAACCTCTGCTCCATaGAGCCCGACCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LSREGWASPRPVLSGQAAPTSAP*SPTSSV
Trigger: CACTGAAGAGGTCGGGCTCCATGGAGCAGAGGTTGG...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCTCTGGGAGGCCAGAGTaGGGACGTCCGCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSSGRPE*GRPPPS
Trigger: GCTCGGAGGCGGACGTCCCCACTCTGGCCTCCCAGA...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGTCTGGGAGGCCAGAGTaGGGACGTCCGCCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMSGRPE*GRPPPS
Trigger: GCTCGGAGGCGGACGTCCCCACTCTGGCCTCCCAGA...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGTCCTCCGCGGCCTTCTaGGAGGCCAGAGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMSSAAF*EARVGT
Trigger: CGTCCCCACTCTGGCCTCCCAGAAGGCCGCGGAGGA...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCTCCCATGGGGTCCATaGCGGCCGCGTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDLPWGP*RPRPSS
Trigger: AGAGGAAGGACGCGGCCGCCATGGACCCCATGGGAG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTGGGGTTCTCTCCCATaGGGTCCATGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPWGSLP*GPWRPR
Trigger: ACGCGGCCGCCATGGACCCCATGGGAGAGAACCCCA...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000621064.1
CDS-3UTR CCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCATGGGGTACAGCGTGTaGTTGGGTCCGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGMGYSV*LGPKQL
Trigger: CAGCTGCTTCGGACCCAACCACACGCTGTACCCCAT...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCCGTCCCTGGCCACATaGCCAGCACGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRPSLAT*PARGSQ
Trigger: CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTGGCCTGGTGGGCTTaGGGACGATGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEALAWWA*GRCWSP
Trigger: TGGGCTCCAGCATCGTCCCCAAGCCCACCAGGCCAG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACCTGGCCTGGTGGGCTTaGGGACGATGCTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNLAWWA*GRCWSP
Trigger: TGGGCTCCAGCATCGTCCCCAAGCCCACCAGGCCAG...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCGCCTGCATCCTGGCCTaGTGGGCTTGGGGACGATGC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAACILA*WAWGRC
Trigger: GCATCGTCCCCAAGCCCACCAGGCCAGGATGCAGGC...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCAAGGAGGAGGGCATGTaGATGCCTGCATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSREGWASPRPVLSGQAAKEEGM*MPASWP
Trigger: AGGCCAGGATGCAGGCATCCACATGCCCTCCTCCTT...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGTCGGCCAGTGCTCAGTaGCCAGGCAGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQSASAQ*PGSPRL
Trigger: GAGCCTGGGGCTGCCTGGCCACTGAGCACTGGCCGA...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTACTGTGTACGGCCCGTaGAAGCTCCGGCGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCTVYGP*KLRRSL
Trigger: GAGGGACCGCCGGAGCTTCCACGGGCCGTACACAGT...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
3UTR CAA 72 bp CCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTaGACACCAAACCAGAAGGCCCCCACGTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: PEGPHGSRSCEL*TPNQKAPTSPP
Trigger: AGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000621064.1
CDS-3UTR TCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCAGGAATCCACGAACTaGGGCTTTCTTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGQESTN*GFLACH
Trigger: ATGACAAGCAAGAAAGCCTCAGTTCGTGGATTCCTG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTGATAAAGCGGCTGCGTaGAGTCCCCCAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCDKAAA*SPPAAP
Trigger: GGGAGCTGCTGGGGGACTTCACGCAGCCGCTTTATC...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCGGACAATGGCCCAAATaGGAAGGTCACGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGGQWPK*EGHGWG
Trigger: ACCCCATCCGTGACCTTCTCATTTGGGCCATTGTCC...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACGGCGCTCGTTGTGGATaGGGATGGCCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNGARCG*GWPAWP
Trigger: TGGCCAAGCAGGCCATCCTCATCCACAACGAGCGCC...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGGCGCTCGTTGTGGATaGGGATGGCCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEGARCG*GWPAWP
Trigger: TGGCCAAGCAGGCCATCCTCATCCACAACGAGCGCC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGTCTGCCCGAAGATGGTaGGGTAGGAGTGGTAGACGG +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKESARRW*GRSGRR
Trigger: CCGTCTACCACTCCTACCTCACCATCTTCGGGCAGA...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACTGCAGTGCTCCGGGTTaGAGTTCACACCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDCSAPG*SSHRRC
Trigger: ACATCGACGGTGTGAACTTCAACCCGGAGCACTGCA...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGCACGGGGAAGCGCGTaGCAGGGCAGTTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMARGSA*QGSWGR
Trigger: TCTACCCCAACTGCCCTGTCACGCGCTTCCCCGTGC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTCCGCCTCCACCGCGTaGCCATGGGGTACAGCGTGT +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRSASTA*PWGTAC
Trigger: ACACGCTGTACCCCATGGTCACGCGGTGGAGGCGGA...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGCCTGGAAGTGGACGCTaGCGGCCACCGTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMPGSGR*RPPSRS
Trigger: GGATCGAGACGGTGGCCGTCAGCGTCCACTTCCAGG...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATACCGCCTCGCCTACCTaGTTCATGACGCCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDTASPT*FMTPVW
Trigger: CCACACCGGCGTCATGAAGCAGGTAGGCGAGGCGGT...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGACCGCCTCGCCTACCTaGTTCATGACGCCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMETASPT*FMTPVW
Trigger: CCACACCGGCGTCATGAAGCAGGTAGGCGAGGCGGT...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGCGATTCCATGCCACTaGCAGTTTCAGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDAIPCH*QFQLVV
Trigger: GACCACCAGCTGAAACTGGCAGTGGCATGGAATCGC...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCGGGAAGGCCAGCATaGACAGGGTCACACGCCACA +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEAGRPA*TGSHAT
Trigger: TGTGGCGTGTGACCCTGTGCATGCTGGCCTTCCCGC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGAAGACCACCACGGGTaGGGTGAAGAAGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEEDHHG*GEEGTG
Trigger: GCCCGTGCCTTCTTCACCGCACCCGTGGTGGTCTTC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCGAAGACCACCACGGGTaGGGTGAAGAAGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAEDHHG*GEEGTG
Trigger: GCCCGTGCCTTCTTCACCGCACCCGTGGTGGTCTTC...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCCCTGCAGGTCAGCCCTaGCACGAAGAGCAAGATTGC +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAPAGQP*HEEQDC
Trigger: GCAATCTTGCTCTTCGTGGCAGGGCTGACCTGCAGG...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGGCTGTCTGGGCCACCTaGTCCTCCAGGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRAVWAT*SSREAN
Trigger: GTTGGCCTCCCTGGAGGAGCAGGTGGCCCAGACAGC...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCCAGCATCTTCTTTATaGTCTTCCTGCAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGPASSL*SSCRWL
Trigger: GAGCCATCTGCAGGAAGAGCATAAAGAAGATGCTGG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCGCCTGTCCACCACCTaGCATCGGATGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCERLSTT*HRMEAP
Trigger: GGGGGCCTCCATCCGATGGCAGGTGGTGGACAGGCG...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCTCGCATAGAGTGGGATaGGCCTGTCCACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGSHRVG*ACPPPA
Trigger: GGCAGGTGGTGGACAGGCGCATCCCACTCTATGCGA...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGCCAAACCCCATCATGTaGAGGGCCCAGGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEPNPIM*RAQEQP
Trigger: AGGCTGTTCCTGGGCCCTGCACATGATGGGGTTTGG...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAACCAAACCCCATCATGTaGAGGGCCCAGGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQPNPIM*RAQEQP
Trigger: AGGCTGTTCCTGGGCCCTGCACATGATGGGGTTTGG...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGGGAGGGAGAGCTTCTaGAGCCTCGTCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMGRESF*SLVPGS
Trigger: GGACCCTGGGACGAGGCTGCAGAAGCTCTCCCTCCC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGGGCATGTGGATGCCTaGATCCTGGCCTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEGHVDA*ILAWWA
Trigger: AGCCCACCAGGCCAGGATGCAGGCATCCACATGCCC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCAGGGGCAACCCGGCCTaGACTGTGTACGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKARGNPA*TVYGPW
Trigger: CCACGGGCCGTACACAGTGCAGGCCGGGTTGCCCCT...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS-3UTR GCA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGTCCACCACCGTGAGATaGAGGAACTGTCTAGATTTG +
Preference number: 4 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGSTTVR*RNCLDL
Trigger: CAAATCTAGACAGTTCCTGCATCTCACGGTGGTGGA...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCTCCGTCTTCTTCCTaGTCCCGGCTCAGCATCCGG +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAPPSSS*SRLSIR
Trigger: CCGGATGCTGAGCCGGGAGCAGGAAGAAGACGGAGG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621064.1
CDS-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGCCAAAGGCATCGGTTaGCATCTCCTGGACATGTTT +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQAKGIG*HLLDMF
Trigger: AAACATGTCCAGGAGATGCCAACCGATGCCTTTGGC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCAAGCTGCCCGTGGGATaGATCAGGCCCTCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKAKLPVG*IRPSRR
Trigger: CCGCCGCGAGGGCCTGATCCATCCCACGGGCAGCTT...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCGGGGAAGCTGCCCGTaGGATGGATCAGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCERGSCP*DGSGPR
Trigger: GCGAGGGCCTGATCCATCCCACGGGCAGCTTCCCCG...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGATCTCCACCCCGTACTaGCCGTGGGTCCCGTCGTCC +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMISTPY*PWVPSS
Trigger: GGACGACGGGACCCACGGCCAGTACGGGGTGGAGAT...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCGGGTGCCGTTGGTGGTaGCGTTGTCGATGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGGCRWW*RCRWCA
Trigger: TGCACACCATCGACAACGCCACCACCAACGGCACCC...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACACAGGGGGTGCCGTTaGTGGTGGCGTTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEHRGCR*WWRCRW
Trigger: CCATCGACAACGCCACCACCAACGGCACCCCCTGTG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCGCAAGGCCTGCAAGATaGCCACATCCACGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAARPAR*PHPRPA
Trigger: AGCAGGACGTGGATGTGGCCATCTTGCAGGCCTTGC...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGAGCTCCCGCAGCACCTaGGCCACGTGGTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELSSRST*ATWCIC
Trigger: GCAGATGCACCACGTGGCCCAGGTGCTGCGGGAGCT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGAGCTCCCGCAGCACCTaGGCCACGTGGTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMSSRST*ATWCIC
Trigger: GCAGATGCACCACGTGGCCCAGGTGCTGCGGGAGCT...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCCGAGCTGCAGGCAGGTaGTCTTCCCCCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKARAAGR*SSPRPR
Trigger: CCGAGGCCTGGGGGAAGACCACCTGCCTGCAGCTCG...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGCCGCTGCTTTTGCTaGAACTGTCGGTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQGRCFC*NCRFWR
Trigger: CCTCCAGAACCGACAGTTCCAGCAAAAGCAGCGGCC...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGCCCGACCTCTTCAGTaGGTCCAGGTCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPARPLQ*VQVQQV
Trigger: GACCTGCTGGACCTGGACCCACTGAAGAGGTCGGGC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAACCAACCTCTGCTCCATaGAGCCCGACCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQPTSAP*SPTSSV
Trigger: CACTGAAGAGGTCGGGCTCCATGGAGCAGAGGTTGG...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGCTCCCATGGGGTCCATaGCGGCCGCGTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVELPWGP*RPRPSS
Trigger: AGAGGAAGGACGCGGCCGCCATGGACCCCATGGGAG...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTGTCCTGTGCGGCCCATaGGGTTCTCTCCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCVLCGP*GSLPWG
Trigger: ACCCCATGGGAGAGAACCCCATGGGCCGCACAGGAC...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000621064.1
CDS-3UTR CCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGATGGGGTACAGCGTGTaGTTGGGTCCGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEMGYSV*LGPKQL
Trigger: CAGCTGCTTCGGACCCAACCACACGCTGTACCCCAT...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGTGGTTCGCATAGAGTaGGATGCGCCTGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEVVRIE*DAPVHH
Trigger: GTGGTGGACAGGCGCATCCCACTCTATGCGAACCAC...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCGAAGGGAGTGGACTCTaGCCAAGGGCCCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAEGSGL*PRAQLH
Trigger: GTGCAGCTGGGCCCTTGGCCAGAGTCCACTCCCTTC...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCAGCCAGGAAGGGAGTaGACTCTGGCCAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDQPGRE*TLAKGP
Trigger: TGGGCCCTTGGCCAGAGTCCACTCCCTTCCTGGCTG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCACCCTGGGGCCAACCCTaGCAGGGGCCCTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAPWGQP*QGPSAS
Trigger: AGACGCAGAGGGCCCCTGCCAGGGTTGGCCCCAGGG...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACCCGTCACACAGCCCCTaGCCCTGGACGTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNPSHSP*PWTCQE
Trigger: TTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGG...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTGTCCAGGGAAGGGTaGGCATCACCTCGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEALSREG*ASPRPV
Trigger: CACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAACTGGGGACAAGGGGGTaGCTAGAGAGCTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQLGTRG*LESFGS
Trigger: TGACCCAAAGCTCTCTAGCCACCCCCTTGTCCCCAG...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGACTGTGTACGGCCCGTaGAAGCTCCGGCGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQTVYGP*KLRRSL
Trigger: GAGGGACCGCCGGAGCTTCCACGGGCCGTACACAGT...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS-3UTR TCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTCTGGCTCAGGCCCGTaGAGACGATGTCGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEASGSGP*RRCRQR
Trigger: CCTTTGGCGACATCGTCTTCACGGGCCTGAGCCAGA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCAGCTGCTGCTCAGGCTaGAGTCCCGCACCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCSCCSG*SPAPPR
Trigger: GCGAGGCGGTGCGGGACTTCAGCCTGAGCAGCAGCT...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATCCACGTCCTGCTaGCCATCCTTGCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLETSTSC*PSLPSR
Trigger: CCGGGAAGGCAAGGATGGTCAGCAGGACGTGGATGT...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATACATCCACGTCCTGCTaGCCATCCTTGCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDTSTSC*PSLPSR
Trigger: CCGGGAAGGCAAGGATGGTCAGCAGGACGTGGATGT...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGTGGTCTTGGCTCCGTaGGGCTTTCAGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEVVLAP*GFQQGL
Trigger: CAGGCCTTGCTGAAAGCCTCACGGAGCCAAGACCAC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCGCAAGGTGTCCCAGGTaGCAAACTCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAARCPR*QTPSAA
Trigger: TGCAGCTGAAGGAGTTTGTCACCTGGGACACCTTGC...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTCCGGTAGCACTCGGTaGAGACCCCGATGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEASGSTR*RPRWLC
Trigger: ACAGAGCCATCGGGGTCTTCACCGAGTGCTACCGGA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCCTCGGACACGCGGGTaGGCAGTTTCTGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRPRTRG*AVSGLS
Trigger: AGAGAGCCCAGAAACTGCTCACCCGCGTGTCCGAGG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCTGGAAGTCCACCATaGGCACGTAGGCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEAGSPP*ARRRTG
Trigger: GCCTGTTCGCCTACGTGCTCATGGTGGACTTCCAGC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGCTGGAAGTCCACCATaGGCACGTAGGCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPAGSPP*ARRRTG
Trigger: GCCTGTTCGCCTACGTGCTCATGGTGGACTTCCAGC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCAGTCCAGAGAGAGGATaGCGCGCCCGGGGTACAGCG +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKASPERG*RARGTA
Trigger: CGCTGTACCCCGGGCGCGTCATCCTCTCTCTGGACT...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTCGTCCGCCTCCGAGCTaGAGCCGCTGGCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGRPPPS*SRWPAA
Trigger: CGCTGCGGGCCAGCGGCTTCAGCTCGGAGGCGGACG...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACCTCCCGGGTCACCTTaGCCCCTTCCAGTTCATGAG +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEPPGSP*PLPVHE
Trigger: CTCATGAACTGGAAGGGGTCAAGGTGACCCGGGAGG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAATGAGCTGCTCGGGGTaGCACAGCCAGGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEMSCSG*HSQEGS
Trigger: ACTCCCTTCCTGGCTGTGTCACCCCGAGCAGCTCAT...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCATGAGCTGCTCGGGGTaGCACAGCCAGGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAMSCSG*HSQEGS
Trigger: ACTCCCTTCCTGGCTGTGTCACCCCGAGCAGCTCAT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCACCACGTTCCCCTCCTaGGGGCCCTCATGGTTCACG +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSTTFPS*GPSWFT
Trigger: CGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGT...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACTTCTCGGACCCGCGTaGTTCCACCACCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLELLGPA*FHHREM
Trigger: CATCTCACGGTGGTGGAATCACGCGGGTCCGAGAAG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS-3UTR GCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATTTGGGTCCCACTGTGTaGCCTGGAAGGTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDLGPTV*PGRCGA
Trigger: AGCCCCACACCTTCCAGGGCACACAGTGGGACCCAA...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCACCGCCTCGCCTACCTaGTTCATGACGCCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSTASPT*FMTPVW
Trigger: CCACACCGGCGTCATGAAGCAGGTAGGCGAGGCGGT...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCACTCGGCGGGGAAGCTaGCCGTGGGATGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKATRRGS*PWDGSG
Trigger: GCCTGATCCATCCCACGGGCAGCTTCCCCGCCGAGT...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCAACCACACAGGGGGTaGCGTTGGTGGTGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAQPHRG*RWWWRC
Trigger: ACAACGCCACCACCAACGGCACCCCCTGTGTGGTTG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCAACCACACAGGGGGTaGCGTTGGTGGTGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPQPHRG*RWWWRC
Trigger: ACAACGCCACCACCAACGGCACCCCCTGTGTGGTTG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGAACACGCTCAGTTTCTaGTGGATCAGGGAGATAGTG +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQNTLSF*WIREIV
Trigger: CACTATCTCCCTGATCCAGCAGAAACTGAGCGTGTT...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCGCGATTCCATGCCACTaGCAGTTTCAGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAAIPCH*QFQLVV
Trigger: GACCACCAGCTGAAACTGGCAGTGGCATGGAATCGC...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCGCTGTCATCGTGGGGTaGAGATCTGAAGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAAVIVG*RSEGFH
Trigger: GTGGAAGCCTTCAGATCTGCACCCCACGATGACAGC...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGCTGTCATCGTGGGGTaGAGATCTGAAGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQAVIVG*RSEGFH
Trigger: GTGGAAGCCTTCAGATCTGCACCCCACGATGACAGC...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACACCCCGATGGCTCTGTaGTCATACTCCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNTPMAL*SYSSAS
Trigger: GCTGGCGGAGGAGTATGAGCACAGAGCCATCGGGGT...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATGCGGGAAGGCCAGCATaGACAGGGTCACACGCCACA +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHAGRPA*TGSHAT
Trigger: TGTGGCGTGTGACCCTGTGCATGCTGGCCTTCCCGC...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGGGGTGCCCACATCCTaGAGCCTCTTCTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPGVPTS*SLFSLK
Trigger: CTTCAGGGAGAAGAGGCTGCAGGATGTGGGCACCCC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGCTTGTAGGGGTCGGTaGCATTGGGGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDACRGR*HWGCSA
Trigger: AGCACTGCAGCCCCAATGGCACCGACCCCTACAAGC...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGCCTCCGTCTTCTTCCTaGCTCCCGGCTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEPPSSS*LPAQHP
Trigger: CGGATGCTGAGCCGGGAGGCAGGAAGAAGACGGAGG...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCGACGGCCAGTGCTCCTaGCGGAGGATCCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKADGQCS*RRIRFS
Trigger: GCTGAAGCGGATCCTCCGGCAGGAGCACTGGCCGTC...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGTCAAAAGACGGCCAGTaGTCCTGCCGGAGGATCCGC +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMESKDGQ*SCRRIR
Trigger: GCGGATCCTCCGGCAGGAGCACTGGCCGTCTTTTGA...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTCAAAAGACGGCCAGTaGTCCTGCCGGAGGATCCGC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEASKDGQ*SCRRIR
Trigger: GCGGATCCTCCGGCAGGAGCACTGGCCGTCTTTTGA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCCCGAGTCGCAGGCGTaGAGGTTAGAGTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEPESQA*RLEFSL
Trigger: CAGGCTGAACTCTAACCTGCACGCCTGCGACTCGGG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCCCGAACTCAGCGGCTaGCTTCTGGAGGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPPELSG*LLEEGL
Trigger: AAGACCCTCCTCCAGAAGGCAGCCGCTGAGTTCGGG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGCTCTGAGTAGCCTGTaGCCTGTCTTGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQALSSL*PVLSSP
Trigger: AGGAGAGCTCAAGACAGGGCACAGGCTACTCAGAGC...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCACTCTCCGGGGAACTTaGCTCAGGCCAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGTLRGT*LRPMTS
Trigger: GGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGT...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCACACGTCCCCGCCTCCTaGTCATGCCGTCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAHVPAS*SCRPWP
Trigger: TGGCCAGGGACGGCATGAGCAGGAGGCGGGGACGTG...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGGTAGGGCTGAGGGGCTaGAGGACATCCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQVGLRG*RTSTGC
Trigger: GCAGCCTGTGGATGTCCTGCAGCCCCTCAGCCCTAC...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGAGGAGGGCATGTGGATaGCTGCATCCTGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMERRACG*LHPGLV
Trigger: CACCAGGCCAGGATGCAGGCATCCACATGCCCTCCT...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATGAGCCTCTGCAGGGGTaGCAGGGCACATTGGCACCA +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHEPLQG*QGTLAP
Trigger: TGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCAAGCTGCCCGTGGGATaGATCAGGCCCTCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCKLPVG*IRPSRR
Trigger: CCGCCGCGAGGGCCTGATCCATCCCACGGGCAGCTT...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAATCTCCACCCCGTACTaGCCGTGGGTCCCGTCGTCC +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLISTPY*PWVPSS
Trigger: GGACGACGGGACCCACGGCCAGTACGGGGTGGAGAT...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGTGGTGGCGTTGTCGATaGTGTGCAACGTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELWWRCR*CATCPG
Trigger: GCCCGGGCACGTTGCACACCATCGACAACGCCACCA...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGTGGTGGCGTTGTCGATaGTGTGCAACGTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQWWRCR*CATCPG
Trigger: GCCCGGGCACGTTGCACACCATCGACAACGCCACCA...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGTGGTGGCGTTGTCGATaGTGTGCAACGTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMWWRCR*CATCPG
Trigger: GCCCGGGCACGTTGCACACCATCGACAACGCCACCA...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGAGGGGGTGCCGTTGGTaGTGGCGTTGTCGATGGTGT +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMERGCRW*WRCRWC
Trigger: ACACCATCGACAACGCCACCACCAACGGCACCCCCT...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATCACAGGGGGTGCCGTTaGTGGTGGCGTTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHHRGCR*WWRCRW
Trigger: CCATCGACAACGCCACCACCAACGGCACCCCCTGTG...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGACGCTCAGTTTCTGCTaGATCAGGGAGATAGTGATG +
Preference number: 4 (lower is better)
Translates to: PPPAHAVPGHMASTWLPGTLSFC*IREIVM
Trigger: CATCACTATCTCCCTGATCCAGCAGAAACTGAGCGT...CCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTAGCACCTGGGCCACGTaGTGCATCTGCAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCSTWAT*CICSLL
Trigger: CAGCAAGCTGCAGATGCACCACGTGGCCCAGGTGCT...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300481.13
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATACGTTGAGCTTGACGTaGGGAACGGGCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDTLSLT*GTGSRS
Trigger: GCTCCTGCTGCCCGTTCCCCACGTCAAGCTCAACGT...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCACGTTGAGCTTGACGTaGGGAACGGGCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEATLSLT*GTGSRS
Trigger: GCTCCTGCTGCCCGTTCCCCACGTCAAGCTCAACGT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAACGGGTGAGCAGTTTCTaGGCTCTCTCTTCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQRVSSF*ALSSSF
Trigger: GAAGGACGAAGAGAGAGCCCAGAAACTGCTCACCCG...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTTGTCCACGGAGAGCTaGCCCCACCACACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEALSTES*PHHTLV
Trigger: GACCAAGGTGTGGTGGGGCCAGCTCTCCGTGGACAA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCAGGAGGGCACAGGCTaGAAGTCCACCATGAGCACG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEQEGTG*KSTMST
Trigger: CGTGCTCATGGTGGACTTCCAGCCTGTGCCCTCCTG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGATGAAGAGCTGCAGGTaGCTGAGGAGGATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEMKSCR*LRRMKG
Trigger: CCCCTTCATCCTCCTCAGCCACCTGCAGCTCTTCAT...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCCTCCCATGGGGTCCATaGCGGCCGCGTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKALPWGP*RPRPSS
Trigger: AGAGGAAGGACGCGGCCGCCATGGACCCCATGGGAG...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGTGGGGTTCTCTCCCATaGGGTCCATGGCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCEWGSLP*GPWRPR
Trigger: ACGCGGCCGCCATGGACCCCATGGGAGAGAACCCCA...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000621064.1
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATTTCTGGTCCTGGAAGTaGACGCTGACGGCCACCGTC +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDFWSWK*TLTATV
Trigger: GACGGTGGCCGTCAGCGTCCACTTCCAGGACCAGAA...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGCTCCACGTCATTCTaGTCCTGGAAGTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVASSTSF*SWKWTL
Trigger: CAGCGTCCACTTCCAGGACCAGAATGACGTGGAGCT...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCACCACCTGCCATCGGATaGAGGCCCCCGAGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAPPAIG*RPPSRR
Trigger: CCTGCGACTCGGGGGCCTCCATCCGATGGCAGGTGG...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCGAACAGCCTGAGTCCTaGCCAGGCTCAGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGEQPES*PGSGER
Trigger: TCTCTCTCCTGAGCCTGGCCAGGACTCAGGCTGTTC...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCAGCCGTGAGGGGCACTaGGTCCACCAAACCCCATCA +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEASREGH*VHQTPS
Trigger: TGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAAGCCGTGAGGGGCACTaGGTCCACCAAACCCCATCA +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLESREGH*VHQTPS
Trigger: TGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCT...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGGAAGGGAGTGGACTCTaGCCAAGGGCCCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELEGSGL*PRAQLH
Trigger: GTGCAGCTGGGCCCTTGGCCAGAGTCCACTCCCTTC...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCAGCCAGGAAGGGAGTaGACTCTGGCCAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRQPGRE*TLAKGP
Trigger: TGGGCCCTTGGCCAGAGTCCACTCCCTTCCTGGCTG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCAGCCAGGAAGGGAGTaGACTCTGGCCAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQQPGRE*TLAKGP
Trigger: TGGGCCCTTGGCCAGAGTCCACTCCCTTCCTGGCTG...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGCAGCCAGGAAGGGAGTaGACTCTGGCCAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEQPGRE*TLAKGP
Trigger: TGGGCCCTTGGCCAGAGTCCACTCCCTTCCTGGCTG...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGTGCTCATGCCGTCCCTaGCCACATGGCCAGCACGTG +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMCSCRP*PHGQHV
Trigger: CACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCA...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCCGTCACACAGCCCCTaGCCCTGGACGTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRPSHSP*PWTCQE
Trigger: TTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCTCGGCCAGTGCTCAGTaGCCAGGCAGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCSASAQ*PGSPRL
Trigger: GAGCCTGGGGCTGCCTGGCCACTGAGCACTGGCCGA...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGTGCGAGGGTGGTTACTaGAGCCTTCTCGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVECEGGY*SLLGPA
Trigger: CGCGGGTCCGAGAAGGCTCCAGTAACCACCCTCGCA...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
3UTR CAA 72 bp ACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTaGAGGCACCTCGAAACATGGAGGCCCTCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TVPLAQARQGSM*RHLETWRPSWG
Trigger: TCCCCAAGAGGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.5
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGAGCTTTCCTCAGGGCTaGGGGCTCCATTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMESFPQG*GLHSET
Trigger: GGTCTCAGAATGGAGCCCTCAGCCCTGAGGAAAGCT...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGTAGCCTCCAGCTCTTaGAGAGGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPVASSS*RGCCCC
Trigger: GCAGCAACAGCAGCCTCTTCAAGAGCTGGAGGCTAC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGCCCAGTGCTGGGTCATaGGGTGGTAGATCACGCTGG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEPSAGS*GGRSRW
Trigger: CCAGCGTGATCTACCACCTCATGACCCAGCACTGGG...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATTGGTCTGAGCCACCTTaGCCAGGCCTCTGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDWSEPP*PGLCGK
Trigger: TTTTCCGCAGAGGCCTGGTCAAGGTGGCTCAGACCA...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGTGGTCTGAGCCACCTTaGCCAGGCCTCTGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEWSEPP*PGLCGK
Trigger: TTTTCCGCAGAGGCCTGGTCAAGGTGGCTCAGACCA...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGCGTGGGGTGCAGATCTaGAGGCTTCCACTGCCACTC +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELRGVQI*RLPLPL
Trigger: GAGTGGCAGTGGAAGCCTTCAGATCTGCACCCCACG...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCGTGGGGTGCAGATCTaGAGGCTTCCACTGCCACTC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRRGVQI*RLPLPL
Trigger: GAGTGGCAGTGGAAGCCTTCAGATCTGCACCCCACG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGGATGGGGTCCATGGTaGAGGTCACATGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEGWGPW*RSHGLR
Trigger: CCTCAGGCCATGTGACCTTCACCATGGACCCCATCC...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACGCCTGGATGCCCCCGTaGGACACAAACTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNAWMPP*DTNFMS
Trigger: GGACATGAAGTTTGTGTCTCACGGGGGCATCCAGGC...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGCCTGGATGCCCCCGTaGGACACAAACTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEAWMPP*DTNFMS
Trigger: GGACATGAAGTTTGTGTCTCACGGGGGCATCCAGGC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAATCTGCCCGAAGATGGTaGGGTAGGAGTGGTAGACGG +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLESARRW*GRSGRR
Trigger: CCGTCTACCACTCCTACCTCACCATCTTCGGGCAGA...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAGCACGGGGAAGCGCGTaGCAGGGCAGTTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAARGSA*QGSWGR
Trigger: TCTACCCCAACTGCCCTGTCACGCGCTTCCCCGTGC...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGCCTCCCGGGTCACCTTaGCCCCTTCCAGTTCATGAG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEPPGSP*PLPVHE
Trigger: CTCATGAACTGGAAGGGGTCAAGGTGACCCGGGAGG...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR TCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAGCCTGTGCCCTGTCTTaGGCTCTCCTCCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAACALS*ALLPGH
Trigger: GTGACCCGGGAGGAGAGCTCAAGACAGGGCACAGGC...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCGGGGCCCCTCAGCTCTaGGTAGCCTGTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCGAPQL*VACALS
Trigger: AGACAGGGCACAGGCTACTCAGAGCTGAGGGGCCCC...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGGCCCTCTGCGTCTCTTaGCAGGCCTGGGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELALCVS*QAWALS
Trigger: AGACAAAGCCCAGGCCTGTCAAGAGACGCAGAGGGC...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGAGAGGCTGCTGTTGCTaGGCCGGAGATTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMERGCCC*AGDWRP
Trigger: TGGTCTCCAATCTCCGGCGCAGCAACAGCAGCCTCT...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCAGAGGCTGCTGTTGCTaGGCCGGAGATTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEARGCCC*AGDWRP
Trigger: TGGTCTCCAATCTCCGGCGCAGCAACAGCAGCCTCT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATTTGGGTCCCACTGTGTaGCCTGGAAGGTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHLGPTV*PGRCGA
Trigger: AGCCCCACACCTTCCAGGGCACACAGTGGGACCCAA...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCTCTGAAGGCTTCCACTaGCACTCATCCATGAAGATC +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPSEGFH*HSSMKI
Trigger: GATCTTCATGGATGAGTGGCAGTGGAAGCCTTCAGA...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCAGCCCAGATGATTCCTaGCAGCTCCCGACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPSPDDS*QLPTVL
Trigger: CAGAACCGTCGGGAGCTGGCAGGAATCATCTGGGCT...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGCCTTCAGGATCTTGCTaGAGGCCAAGGCCGCTGCGA +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEPSGSC*RPRPLR
Trigger: TCGCAGCGGCCTTGGCCTGCAGCAAGATCCTGAAGG...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCCTTCAGGATCTTGCTaGAGGCCAAGGCCGCTGCGA +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRPSGSC*RPRPLR
Trigger: TCGCAGCGGCCTTGGCCTGCAGCAAGATCCTGAAGG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGACCCCGATGGCTCTGTaGTCATACTCCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVETPMAL*SYSSAS
Trigger: GCTGGCGGAGGAGTATGAGCACAGAGCCATCGGGGT...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGGGGTGCCCACATCCTaGAGCCTCTTCTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMGVPTS*SLFSLK
Trigger: CTTCAGGGAGAAGAGGCTGCAGGATGTGGGCACCCC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCACTGAAGTACAAGGCTaGCTTCTTCATCAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGTEVQG*LLHQPA
Trigger: TGCGGGCTGATGAAGAAGGCAGCCTTGTACTTCAGT...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCTGCAGGTCAGCCCTaGCACGAAGAGCAAGATTGC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAPAGQP*HEEQDC
Trigger: GCAATCTTGCTCTTCGTGGCAGGGCTGACCTGCAGG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGTGGATGAGGATGGCCTaGTTGGCCACCCCGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELWMRMA*LATPKD
Trigger: GTCCTTCGGGGTGGCCAAGCAGGCCATCCTCATCCA...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGTGGATGAGGATGGCCTaGTTGGCCACCCCGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEWMRMA*LATPKD
Trigger: GTCCTTCGGGGTGGCCAAGCAGGCCATCCTCATCCA...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGGCTTGTAGGGGTCGGTaGCATTGGGGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELACRGR*HWGCSA
Trigger: AGCACTGCAGCCCCAATGGCACCGACCCCTACAAGC...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAAGCTTGTTCTTGAGCTaGTTGTGCCTCTTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQSLFLS*LCLLAG
Trigger: TCCGGCCAAGAGGCACAAGCAGCTCAAGAACAAGCT...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTTCTGCTCGGGCCGCTaGTTTTGCTGGAACTGTCGG +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAFCSGR*FCWNCR
Trigger: CCGACAGTTCCAGCAAAAGCAGCGGCCCGAGCAGAA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAATTCTGCTCGGGCCGCTaGTTTTGCTGGAACTGTCGG +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEFCSGR*FCWNCR
Trigger: CCGACAGTTCCAGCAAAAGCAGCGGCCCGAGCAGAA...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGGTCCTCACGATCCAGTaGAGGGCTTGGGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRVLTIQ*RAWAVW
Trigger: CCAGACAGCCCAAGCCCTGCACTGGATCGTGAGGAC...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCGCGTCCTTCCTCTCTaGCGTGTAAAAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMERVLPL*RVKGWV
Trigger: GACCCACCCTTTTACACGGCAGAGAGGAAGGACGCG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAGCCCACGCAGTCCTGTaGGGCCCATGGGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAAHAVL*GPWGSL
Trigger: GAGAGAACCCCATGGGCCGCACAGGACTGCGTGGGC...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000621064.1
CDS-3UTR GCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGCTTTGTACACCTCCATaGCGCACTTCAGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQLCTPP*RTSASF
Trigger: AAAACTTGCTGAAGTGCGGCATGGAGGTGTACAAAG...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGCCCGAGTCGCAGGCGTaGAGGTTAGAGTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMPESQA*RLEFSL
Trigger: CAGGCTGAACTCTAACCTGCACGCCTGCGACTCGGG...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTCGCATAGAGTGGGATaGGCCTGTCCACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRSHRVG*ACPPPA
Trigger: GGCAGGTGGTGGACAGGCGCATCCCACTCTATGCGA...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATCCCGAACTCAGCGGCTaGCTTCTGGAGGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHPELSG*LLEEGL
Trigger: AAGACCCTCCTCCAGAAGGCAGCCGCTGAGTTCGGG...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCCAAACCCCATCATGTaGAGGGCCCAGGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEPNPIM*RAQEQP
Trigger: AGGCTGTTCCTGGGCCCTGCACATGATGGGGTTTGG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCGTTCATGAGGTCATCTaGAGCAGACTTGCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGVHEVI*SRLAAA
Trigger: GGCTGCCGCAAGTCTGCTGCAGATGACCTCATGAAC...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGTCCATCCGGAGCCTCTaGAGGGGTGCCAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCESIRSL*RGARAH
Trigger: ATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGA...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCTCCATCCGGAGCCTCTaGAGGGGTGCCAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKASIRSL*RGARAH
Trigger: ATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGA...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATTGCAACCAGGCCTGCTaGCCTCAGGACAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHCNQAC*PQDSPL
Trigger: GAGAGGACTGTCCTGAGGGCAGCAGGCCTGGTTGCA...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGTCCCACTGTGTGCCCTaGAAGGTGTGGGGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMESHCVP*KVWGLV
Trigger: TACCAAGCCCCACACCTTCCAGGGCACACAGTGGGA...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTGGAGGGCGTGTCCTaGGAGACTCGGACGTACTTT +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEALEGVS*ETRTYF
Trigger: AAAGTACGTCCGAGTCTCCCAGGACACGCCCTCCAG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGGTGGTAGATCACGCTaGAGGGCGTGTCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMGGRSR*RACPGR
Trigger: TCTCCCAGGACACGCCCTCCAGCGTGATCTACCACC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCCGAGATCAAGAGATTaGGGACGTCCAGCCCCCAGT +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEPRSRD*GRPAPS
Trigger: ACTGGGGGCTGGACGTCCCCAATCTCTTGATCTCGG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCCGAGATCAAGAGATTaGGGACGTCCAGCCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDPRSRD*GRPAPS
Trigger: ACTGGGGGCTGGACGTCCCCAATCTCTTGATCTCGG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTAGGCCCTCGCGGCGGTaGACAGTGCCCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGRPSRR*TVPQVA
Trigger: CGCCACCTGGGGCACTGTCCACCGCCGCGAGGGCCT...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGGGGTGCCGTTGGTGGTaGCGTTGTCGATGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQGCRWW*RCRWCA
Trigger: TGCACACCATCGACAACGCCACCACCAACGGCACCC...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGGGTGCCGTTGGTGGTaGCGTTGTCGATGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMGCRWW*RCRWCA
Trigger: TGCACACCATCGACAACGCCACCACCAACGGCACCC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCGGCAGGTTGGCCACCTaGGCAATGACGTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCGRLAT*AMTSAT
Trigger: CGTGGCCGACGTCATTGCCCAGGTGGCCAACCTGCC...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGCAAGGCCTGCAAGATaGCCACATCCACGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEARPAR*PHPRPA
Trigger: AGCAGGACGTGGATGTGGCCATCTTGCAGGCCTTGC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGCAAGGCCTGCAAGATaGCCACATCCACGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDARPAR*PHPRPA
Trigger: AGCAGGACGTGGATGTGGCCATCTTGCAGGCCTTGC...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGCCAGTTTCAGCTGGTaGTCCCAGTTCTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEASFSW*SQFSWP
Trigger: TGGCCACGAGAACTGGGACCACCAGCTGAAACTGGC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGACGTTGAGCTTGACGTaGGGAACGGGCAGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRTLSLT*GTGSRS
Trigger: GCTCCTGCTGCCCGTTCCCCACGTCAAGCTCAACGT...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAAGCTCCCGACGGTTCTaGACAATGGCCCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQSSRRF*TMAQMR
Trigger: TCTCATTTGGGCCATTGTCCAGAACCGTCGGGAGCT...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATTTGTCCACGGAGAGCTaGCCCCACCACACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHLSTES*PHHTLV
Trigger: GACCAAGGTGTGGTGGGGCCAGCTCTCCGTGGACAA...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGAGAGGATGTTCAGGTaGAAGACCACCACGGGTGCG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEERMFR*KTTTGA
Trigger: CGCACCCGTGGTGGTCTTCCACCTGAACATCCTCTC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGAGAGGATGTTCAGGTaGAAGACCACCACGGGTGCG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPERMFR*KTTTGA
Trigger: CGCACCCGTGGTGGTCTTCCACCTGAACATCCTCTC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGCAGGAGGGCACAGGCTaGAAGTCCACCATGAGCACG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEQEGTG*KSTMST
Trigger: CGTGCTCATGGTGGACTTCCAGCCTGTGCCCTCCTG...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAAGAGCCAGAGGTAGATaGCACACTCGCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLERARGR*HTRTRR
Trigger: CCTCCTGGTGCGAGTGTGCCATCTACCTCTGGCTCT...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATACCCGGCGCTCGTTGTaGATGAGGATGGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHTRRSL*MRMACL
Trigger: CAAGCAGGCCATCCTCATCCACAACGAGCGCCGGGT...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGACCCGGCGCTCGTTGTaGATGAGGATGGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRTRRSL*MRMACL
Trigger: CAAGCAGGCCATCCTCATCCACAACGAGCGCCGGGT...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACATCAGGTCATGGCGCTaGAACTTCCAAATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDIRSWR*NFQIWS
Trigger: GGACCAGATTTGGAAGTTCCAGCGCCATGACCTGAT...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCATGAAGAGCTGCAGGTaGCTGAGGAGGATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGMKSCR*LRRMKG
Trigger: CCCCTTCATCCTCCTCAGCCACCTGCAGCTCTTCAT...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGGCCGCTGCTTTTGCTaGAACTGTCGGTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPGRCFC*NCRFWR
Trigger: CCTCCAGAACCGACAGTTCCAGCAAAAGCAGCGGCC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGTGCCGTGTAAAAGGGTaGGTCATAGATCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGECRVKG*VIDQEL
Trigger: GAGTTCCTGATCTATGACCCACCCTTTTACACGGCA...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCTCCCATGGGGTCCATaGCGGCCGCGTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCLPWGP*RPRPSS
Trigger: AGAGGAAGGACGCGGCCGCCATGGACCCCATGGGAG...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCGTCCTGTGCGGCCCATaGGGTTCTCTCCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKAVLCGP*GSLPWG
Trigger: ACCCCATGGGAGAGAACCCCATGGGCCGCACAGGAC...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000621064.1
CDS-3UTR CCA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTGCTCTTCCTGCAGATaGCTCCATCCTCGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNCSSCR*LHPRSA
Trigger: GGCGGAACGAGGATGGAGCCATCTGCAGGAAGAGCA...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTGCTCTTCCTGCAGATaGCTCCATCCTCGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEACSSCR*LHPRSA
Trigger: GGCGGAACGAGGATGGAGCCATCTGCAGGAAGAGCA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCTTCTGGTCCTGGAAGTaGACGCTGACGGCCACCGTC +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSFWSWK*TLTATV
Trigger: GACGGTGGCCGTCAGCGTCCACTTCCAGGACCAGAA...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGAGAAGCCCTGGTTTCTaGGGGGAACGTCTATGGACT +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKERSPGF*GERLWT
Trigger: AGTCCATAGACGTTCCCCCCAGAAACCAGGGCTTCT...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTGAACAGCCTGAGTCCTaGCCAGGCTCAGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCEQPES*PGSGER
Trigger: TCTCTCTCCTGAGCCTGGCCAGGACTCAGGCTGTTC...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAACAGCCTGAGTCCTaGCCAGGCTCAGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDEQPES*PGSGER
Trigger: TCTCTCTCCTGAGCCTGGCCAGGACTCAGGCTGTTC...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGAGCCGTGAGGGGCACTaGGTCCACCAAACCCCATCA +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVESREGH*VHQTPS
Trigger: TGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCT...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAACATGGAGGCCCTCTTaGGGAGAGTGGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQATWRPS*GEWQGP
Trigger: GGGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGT...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGAGGCACCTCGAAACATaGAGGCCCTCTTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMERHLET*RPSWGE
Trigger: CTCTCCCCAAGAGGGCCTCCATGTTTCGAGGTGCCT...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATGGATGCCTGCATCCTaGCCTGGTGGGCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLWMPAS*PGGLGD
Trigger: GTCCCCAAGCCCACCAGGCCAGGATGCAGGCATCCA...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGTGGCTAGAGAGCTTTaGGTCAGGTGGAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEVAREL*VRWKTE
Trigger: CTCTGTCTTCCACCTGACCCAAAGCTCTCTAGCCAC...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCGGTTCTAGAGACACATaGGGTGGTTGCTGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGGSRDT*GGCCSE
Trigger: CTCCGAGCAGCAACCACCCCATGTGTCTCTAGAACC...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACGTCGTCCACGAGGATaGAGTGAGAGTGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLERRPRG*SESGCC
Trigger: ACAGCAACCACTCTCACTTCATCCTCGTGGACGACG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGTGGTCTGCTCCGATATaGACTTCTCCAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEWSAPI*TSPAWS
Trigger: GGACCAGGCTGGAGAAGTTCATATCGGAGCAGACCA...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGGACAATGGCCCAAATaGGAAGGTCACGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEGQWPK*EGHGWG
Trigger: ACCCCATCCGTGACCTTCTCATTTGGGCCATTGTCC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGATGCAGTCCTGGCTCTaGGCCCAGATGATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRMQSWL*AQMIPA
Trigger: GGCAGGAATCATCTGGGCTCAGAGCCAGGACTGCAT...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGCCCAGCCCCTCGCCTaGTGGCCAAGGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RPEMADLMSWVLPRSPPEAQPLA*WPRVPG
Trigger: CCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGC...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAATGAGCTGCTCGGGGTaGCACAGCCAGGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLMSCSG*HSQEGS
Trigger: ACTCCCTTCCTGGCTGTGTCACCCCGAGCAGCTCAT...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGGACCTCCATGGTGGATaGGCTGCTCGGGGTGACACA +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCEDLHGG*AARGDT
Trigger: TGTGTCACCCCGAGCAGCTCATCCACCATGGAGGTC...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCTCCTGTGAGCTGTTaGCACCAAACCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEAPVSC*HQTRRP
Trigger: GGGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGC...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATAGAGGCTGCTGTTGCTaGGCCGGAGATTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHRGCCC*AGDWRP
Trigger: TGGTCTCCAATCTCCGGCGCAGCAACAGCAGCCTCT...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCGAACTGAGGCTTTCTTaGTTGTCATTGTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPELRLS*LSLLPK
Trigger: CTTCGGCAACAATGACAAGCAAGAAAGCCTCAGTTC...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGTTGGGTCCCACTGTGTaGCCTGGAAGGTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCELGPTV*PGRCGA
Trigger: AGCCCCACACCTTCCAGGGCACACAGTGGGACCCAA...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGGCCTCTGCGGAAAATaGTCTTCAGCCGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMGLCGK*SSAAAS
Trigger: TGAAGCCGCGGCTGAAGAGCATTTTCCGCAGAGGCC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCAAGACAGTCAGCAGCTaGCGCCTCCGGACGATATCT +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAKTVSS*RLRTIS
Trigger: AGATATCGTCCGGAGGCGGCAGCTGCTGACTGTCTT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCTTTCAGCAAGGCCTaGAAGATGGCCACATCCACG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEAFSKA*KMATST
Trigger: CGTGGATGTGGCCATCTTGCAGGCCTTGCTGAAAGC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGTCCACGCGATTCCATaGCACTGCCAGTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEVHAIP*HCQFQL
Trigger: CAGCTGAAACTGGCAGTGGCATGGAATCGCGTGGAC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGCTGTCATCGTGGGGTaGAGATCTGAAGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPAVIVG*RSEGFH
Trigger: GTGGAAGCCTTCAGATCTGCACCCCACGATGACAGC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCGCCACGTGGTGCATCTaGAGCTTGCTGTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSATWCI*SLLWNR
Trigger: CCTGTTCCACAGCAAGCTGCAGATGCACCACGTGGC...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300481.13
CDS-3UTR GCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTTCCTTCAGGATCTTaGTGCAGGCCAAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEVPSGS*CRPRPL
Trigger: CAGCGGCCTTGGCCTGCAGCAAGATCCTGAAGGAAC...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCACCCCGATGGCTCTGTaGTCATACTCCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKATPMAL*SYSSAS
Trigger: GCTGGCGGAGGAGTATGAGCACAGAGCCATCGGGGT...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCATTGGGGCTGCAGTaGTCCGGGTTGAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAPLGLQ*SGLKFT
Trigger: TGTGAACTTCAACCCGGAGCACTGCAGCCCCAATGG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCCATTGGGGCTGCAGTaGTCCGGGTTGAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDPLGLQ*SGLKFT
Trigger: TGTGAACTTCAACCCGGAGCACTGCAGCCCCAATGG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTCAAATCTGGTCCGTGTaGTCCTGCACCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCQIWSV*SCTCWK
Trigger: CTTCCAGCAGGTGCAGGAGCACACGGACCAGATTTG...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCTCGGGCCGCTGCTTTTaGTGGAACTGTCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSSGRCF*WNCRFW
Trigger: CCAGAACCGACAGTTCCAGCAAAAGCAGCGGCCCGA...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGTCGGGCCGCTGCTTTTaGTGGAACTGTCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELSGRCF*WNCRFW
Trigger: CCAGAACCGACAGTTCCAGCAAAAGCAGCGGCCCGA...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCATGTCCTCGATCTTCTaGTCGGGCCGCTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAMSSIF*SGRCFC
Trigger: GCAAAAGCAGCGGCCCGAGCAGAAGATCGAGGACAT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCATGTCCTCGATCTTCTaGTCGGGCCGCTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPMSSIF*SGRCFC
Trigger: GCAAAAGCAGCGGCCCGAGCAGAAGATCGAGGACAT...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCACCTCCGTCTTCTTCCTaGCTCCCGGCTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAPPSSS*LPAQHP
Trigger: CGGATGCTGAGCCGGGAGGCAGGAAGAAGACGGAGG...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGTCTTTATGCTCTTCCTaGAGATGGCTCCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRSLCSS*RWLHPR
Trigger: ACGAGGATGGAGCCATCTGCAGGAAGAGCATAAAGA...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCCTTTGTACACCTCCATaGCGCACTTCAGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: VQGRVGITSASAQWPGSPLCTPP*RTSASF
Trigger: AAAACTTGCTGAAGTGCGGCATGGAGGTGTACAAAG...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGTTCATGAGGTCATCTaGAGCAGACTTGCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEVHEVI*SRLAAA
Trigger: GGCTGCCGCAAGTCTGCTGCAGATGACCTCATGAAC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGACTCTCCGGGGAACTTaGCTCAGGCCAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELTLRGT*LRPMTS
Trigger: GGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGTCCCACTGTGTGCCCTaGAAGGTGTGGGGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMSHCVP*KVWGLV
Trigger: TACCAAGCCCCACACCTTCCAGGGCACACAGTGGGA...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCTACTTTTTCACCTTCTaGCTCAGGCCCGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAYFFTF*LRPVKT
Trigger: CGTCTTCACGGGCCTGAGCCAGAAGGTGAAAAAGTA...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCGGTGGTAGATCACGCTaGAGGGCGTGTCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKAGGRSR*RACPGR
Trigger: TCTCCCAGGACACGCCCTCCAGCGTGATCTACCACC...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACCTCCGGACGATATCTTaGATCTTTTTGGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDLRTIS*IFLVHS
Trigger: CGAGTGGACCAAAAAGATCCAAGATATCGTCCGGAG...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAATGGCCAAAGTGGTCTTaGCTCCGTGAGGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEWPKWS*LREAFS
Trigger: GCTGAAAGCCTCACGGAGCCAAGACCACTTTGGCCA...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTTCTCGTGGCCAAAGTaGTCTTGGCTCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAFSWPK*SWLREA
Trigger: AGCCTCACGGAGCCAAGACCACTTTGGCCACGAGAA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATTGGTCCCAGTTCTCGTaGCCAAAGTGGTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDWSQFS*PKWSWL
Trigger: GAGCCAAGACCACTTTGGCCACGAGAACTGGGACCA...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGTGGTCCCAGTTCTCGTaGCCAAAGTGGTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEWSQFS*PKWSWL
Trigger: GAGCCAAGACCACTTTGGCCACGAGAACTGGGACCA...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCACTGCCAGTTTCAGCTaGTGGTCCCAGTTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPTASFS*WSQFSW
Trigger: CCACGAGAACTGGGACCACCAGCTGAAACTGGCAGT...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCAGCTCCCGACGGTTCTaGACAATGGCCCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGSSRRF*TMAQMR
Trigger: TCTCATTTGGGCCATTGTCCAGAACCGTCGGGAGCT...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGGAGAGGATGTTCAGGTaGAAGACCACCACGGGTGCG +
Preference number: 4 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQERMFR*KTTTGA
Trigger: CGCACCCGTGGTGGTCTTCCACCTGAACATCCTCTC...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGAGAGCCAGAGGTAGATaGCACACTCGCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELRARGR*HTRTRR
Trigger: CCTCCTGGTGCGAGTGTGCCATCTACCTCTGGCTCT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGATGAAGAGCTGCAGGTaGCTGAGGAGGATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEMKSCR*LRRMKG
Trigger: CCCCTTCATCCTCCTCAGCCACCTGCAGCTCTTCAT...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGGCCGCTGCTTTTGCTaGAACTGTCGGTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEGRCFC*NCRFWR
Trigger: CCTCCAGAACCGACAGTTCCAGCAAAAGCAGCGGCC...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGCCAACCTCTGCTCCATaGAGCCCGACCTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMPTSAP*SPTSSV
Trigger: CACTGAAGAGGTCGGGCTCCATGGAGCAGAGGTTGG...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGATGGGGTACAGCGTGTaGTTGGGTCCGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMMGYSV*LGPKQL
Trigger: CAGCTGCTTCGGACCCAACCACACGCTGTACCCCAT...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGACGTCATTCTGGTCCTaGAAGTGGACGCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELTSFWS*KWTLTA
Trigger: GGCCGTCAGCGTCCACTTCCAGGACCAGAATGACGT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCACGTCATTCTGGTCCTaGAAGTGGACGCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSTSFWS*KWTLTA
Trigger: GGCCGTCAGCGTCCACTTCCAGGACCAGAATGACGT...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATAGCTCCACGTCATTCTaGTCCTGGAAGTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDSSTSF*SWKWTL
Trigger: CAGCGTCCACTTCCAGGACCAGAATGACGTGGAGCT...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCAGCTCCACGTCATTCTaGTCCTGGAAGTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEASSTSF*SWKWTL
Trigger: CAGCGTCCACTTCCAGGACCAGAATGACGTGGAGCT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTGGTTCGCATAGAGTaGGATGCGCCTGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEVVRIE*DAPVHH
Trigger: GTGGTGGACAGGCGCATCCCACTCTATGCGAACCAC...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGGTGGTTCGCATAGAGTaGGATGCGCCTGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRVVRIE*DAPVHH
Trigger: GTGGTGGACAGGCGCATCCCACTCTATGCGAACCAC...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAACAGCCTGAGTCCTaGCCAGGCTCAGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMEQPES*PGSGER
Trigger: TCTCTCTCCTGAGCCTGGCCAGGACTCAGGCTGTTC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGCAGATTTAATGTCTTaGGTTTTACCACGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PRLLLMPSLATWPARGSQADLMS*VLPRSP
Trigger: AGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGAGCTTTGGGTCAGGTaGAAGACAGAGGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEELWVR*KTEACP
Trigger: TGGACAGGCCTCTGTCTTCCACCTGACCCAAAGCTC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGAGCTTTGGGTCAGGTaGAAGACAGAGGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPELWVR*KTEACP
Trigger: TGGACAGGCCTCTGTCTTCCACCTGACCCAAAGCTC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTCGTTGTACTGGATCGTaGACAGTGGCTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCRCTGS*TVAPGC
Trigger: ACACCCTGGAGCCACTGTCCACGATCCAGTACAACG...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAGCAAACATGCGAGGGTaGTTACTGGAGCCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEANMRG*LLEPSR
Trigger: CCGAGAAGGCTCCAGTAACCACCCTCGCATGTTTGC...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCCAGCAGGTCCACCATaGCGTCAACCCTGCCATGTT +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRPAGPP*RQPCHV
Trigger: AACATGGCAGGGTTGACGCCATGGTGGACCTGCTGG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS-3UTR TCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGAGCTTTCCTCAGGGCTaGGGGCTCCATTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCESFPQG*GLHSET
Trigger: GGTCTCAGAATGGAGCCCTCAGCCCTGAGGAAAGCT...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGTGGTCTGCTCCGATATaGACTTCTCCAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMWSAPI*TSPAWS
Trigger: GGACCAGGCTGGAGAAGTTCATATCGGAGCAGACCA...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACACACGATGGGGATCTTaGTGGCCACACCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNTRWGS*WPHLLF
Trigger: AAAGAGGAGGTGTGGCCATCAAGATCCCCATCGTGT...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCACACGATGGGGATCTTaGTGGCCACACCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEATRWGS*WPHLLF
Trigger: AAAGAGGAGGTGTGGCCATCAAGATCCCCATCGTGT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAGTGGTCTTGGCTCCGTaGGGCTTTCAGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAVVLAP*GFQQGL
Trigger: CAGGCCTTGCTGAAAGCCTCACGGAGCCAAGACCAC...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATACTGCCACTCATCCATaGAGATCTCACTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDTATHP*RSHCGQ
Trigger: TTGCCCGCAGTGAGATCTTCATGGATGAGTGGCAGT...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGCAGGCTTGTTGGAGATaGGTGCAGCTGTCATCGTGG +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELQACWR*VQLSSW
Trigger: CCACGATGACAGCTGCACTCATCTCCAACAAGCCTG...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGCAAGGTGTCCCAGGTaGCAAACTCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMARCPR*QTPSAA
Trigger: TGCAGCTGAAGGAGTTTGTCACCTGGGACACCTTGC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGGGACAATGGCCCAAATaGGAAGGTCACGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELGQWPK*EGHGWG
Trigger: ACCCCATCCGTGACCTTCTCATTTGGGCCATTGTCC...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAATGCAGTCCTGGCTCTaGGCCCAGATGATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLMQSWL*AQMIPA
Trigger: GGCAGGAATCATCTGGGCTCAGAGCCAGGACTGCAT...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCGCTGGAAGTCCACCATaGGCACGTAGGCGAACAGGC +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCAGSPP*ARRRTG
Trigger: GCCTGTTCGCCTACGTGCTCATGGTGGACTTCCAGC...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGTGCAGTGCTCCGGGTTaGAGTTCACACCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELCSAPG*SSHRRC
Trigger: ACATCGACGGTGTGAACTTCAACCCGGAGCACTGCA...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGTCTCCAGCTTGTTCTTaGGCTGCTTGTGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMESPACS*AACASW
Trigger: CCAAGAGGCACAAGCAGCTCAAGAACAAGCTGGAGA...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTCTCCAGCTTGTTCTTaGGCTGCTTGTGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPSPACS*AACASW
Trigger: CCAAGAGGCACAAGCAGCTCAAGAACAAGCTGGAGA...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCATGAGCTGCTCGGGGTaGCACAGCCAGGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCMSCSG*HSQEGS
Trigger: ACTCCCTTCCTGGCTGTGTCACCCCGAGCAGCTCAT...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATAGAGCCAGCCAGGCCTaGGATGGCAGATTTAATGTC +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDRASQA*DGRFNV
Trigger: GACATTAAATCTGCCATCTCAGGCCTGGCTGGCTCT...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGCTGAGGGCTCCATTCTaGGACCCCCACGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQLRAPF*DPHASC
Trigger: GCAGCTGGCGTGGGGGTCTCAGAATGGAGCCCTCAG...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS-3UTR TCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTGCCTTATTGCTaGTGTCCTCGATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEALPYC*CPRSSA
Trigger: AGCAGAAGATCGAGGACATCAGCAATAAGGCAGGGC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTTGCTTGTCATTGTTaGCGAAGGGGCACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEALACHC*RRGTVA
Trigger: GGCTACAGTGCCCCTTCGGCAACAATGACAAGCAAG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGAAGACAGTCAGCAGCTaGCGCCTCCGGACGATATCT +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEKTVSS*RLRTIS
Trigger: AGATATCGTCCGGAGGCGGCAGCTGCTGACTGTCTT...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGCCTGCTGACCATCCTTaGCTTCCCGGAAGACAGTCA +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELPADHP*LPGRQS
Trigger: TGACTGTCTTCCGGGAAGGCAAGGATGGTCAGCAGG...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATGCTTTCAGCAAGGCCTaGAAGATGGCCACATCCACG +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHAFSKA*KMATST
Trigger: CGTGGATGTGGCCATCTTGCAGGCCTTGCTGAAAGC...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCTTGTTGGAGATGAGTaGAGCTGTCATCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMELVGDE*SCHRGV
Trigger: CACCCCACGATGACAGCTGCACTCATCTCCAACAAG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCACAAACTCCTTCAGCTaGACCCCGTTCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPTNSFS*TPFSRK
Trigger: CTTCCTGGAGAACGGGGTGCAGCTGAAGGAGTTTGT...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTACAAACTCCTTCAGCTaGACCCCGTTCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCTNSFS*TPFSRK
Trigger: CTTCCTGGAGAACGGGGTGCAGCTGAAGGAGTTTGT...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTGCCTCCAGGGCGAGCTaGAGGCAGGTGGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPASRAS*RQVVFP
Trigger: GGGGAAGACCACCTGCCTGCAGCTCGCCCTGGAGGC...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCCCATTGGGGCTGCAGTaGTCCGGGTTGAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSPLGLQ*SGLKFT
Trigger: TGTGAACTTCAACCCGGAGCACTGCAGCCCCAATGG...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGGAAGGCCGGCCTCTaGTGCGTCGCGTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RPEMADLMSWVLPRSPPEGKAGL*CVASLS
Trigger: CGAGAGCGACGCGACGCAGCAGAGGCCGGCCTTCCC...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCTCTTGATGAAGAGCTaGAGGTGGCTGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPLLMKS*RWLRRM
Trigger: CATCCTCCTCAGCCACCTGCAGCTCTTCATCAAGAG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTTCTTGAGCTGCTTGTaGCTCTTGGCCGGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAFLSCL*LLAGVF
Trigger: GAAGACTCCGGCCAAGAGGCACAAGCAGCTCAAGAA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAGTCCTCACGATCCAGTaGAGGGCTTGGGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAVLTIQ*RAWAVW
Trigger: CCAGACAGCCCAAGCCCTGCACTGGATCGTGAGGAC...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAATCTTTATGCTCTTCCTaGAGATGGCTCCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQSLCSS*RWLHPR
Trigger: ACGAGGATGGAGCCATCTGCAGGAAGAGCATAAAGA...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGCCAGCATCTTCTTTATaGTCTTCCTGCAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: LCRGARAHWHHHAGEAKEPASSL*SSCRWL
Trigger: GAGCCATCTGCAGGAAGAGCATAAAGAAGATGCTGG...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTCGCCTGTCCACCACCTaGCATCGGATGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGRLSTT*HRMEAP
Trigger: GGGGGCCTCCATCCGATGGCAGGTGGTGGACAGGCG...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCACCCGAACTCAGCGGCTaGCTTCTGGAGGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAPELSG*LLEEGL
Trigger: AAGACCCTCCTCCAGAAGGCAGCCGCTGAGTTCGGG...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCCAAACCCCATCATGTaGAGGGCCCAGGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCEPNPIM*RAQEQP
Trigger: AGGCTGTTCCTGGGCCCTGCACATGATGGGGTTTGG...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGGTTCATGAGGTCATCTaGAGCAGACTTGCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRVHEVI*SRLAAA
Trigger: GGCTGCCGCAAGTCTGCTGCAGATGACCTCATGAAC...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGGGGAGGGAGAGCTTCTaGAGCCTCGTCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQGRESF*SLVPGS
Trigger: GGACCCTGGGACGAGGCTGCAGAAGCTCTCCCTCCC...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTCCACCAGCACCTTCTaGAGCTTGCTGTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRSTSTF*SLLWNR
Trigger: CCTGTTCCACAGCAAGCTGCAGAAGGTGCTGGTGGA...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCCTGGAGGGCGTGTCCTaGGAGACTCGGACGTACTTT +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKALEGVS*ETRTYF
Trigger: AAAGTACGTCCGAGTCTCCCAGGACACGCCCTCCAG...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCAGGTCAGGTTCCCTTaGCCATCCTCATCCAGTATG +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDQVRFP*PSSSSM
Trigger: CATACTGGATGAGGATGGCCAAGGGAACCTGACCTG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTCAGGTCAGGTTCCCTTaGCCATCCTCATCCAGTATG +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCQVRFP*PSSSSM
Trigger: CATACTGGATGAGGATGGCCAAGGGAACCTGACCTG...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGTGGCCAAAGTGGTCTTaGCTCCGTGAGGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEWPKWS*LREAFS
Trigger: GCTGAAAGCCTCACGGAGCCAAGACCACTTTGGCCA...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATTTCTCGTGGCCAAAGTaGTCTTGGCTCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHFSWPK*SWLREA
Trigger: AGCCTCACGGAGCCAAGACCACTTTGGCCACGAGAA...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTTCTCGTGGCCAAAGTaGTCTTGGCTCCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRFSWPK*SWLREA
Trigger: AGCCTCACGGAGCCAAGACCACTTTGGCCACGAGAA...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGTGGTCCCAGTTCTCGTaGCCAAAGTGGTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEWSQFS*PKWSWL
Trigger: GAGCCAAGACCACTTTGGCCACGAGAACTGGGACCA...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAGCCAGTTTCAGCTGGTaGTCCCAGTTCTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLASFSW*SQFSWP
Trigger: TGGCCACGAGAACTGGGACCACCAGCTGAAACTGGC...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGACTGCCAGTTTCAGCTaGTGGTCCCAGTTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQTASFS*WSQFSW
Trigger: CCACGAGAACTGGGACCACCAGCTGAAACTGGCAGT...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCGGGTGAGCAGTTTCTaGGCTCTCTCTTCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRRVSSF*ALSSSF
Trigger: GAAGGACGAAGAGAGAGCCCAGAAACTGCTCACCCG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGCGGGTGAGCAGTTTCTaGGCTCTCTCTTCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMRVSSF*ALSSSF
Trigger: GAAGGACGAAGAGAGAGCCCAGAAACTGCTCACCCG...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAATGCCGTGTAAAAGGGTaGGTCATAGATCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQCRVKG*VIDQEL
Trigger: GAGTTCCTGATCTATGACCCACCCTTTTACACGGCA...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATGCTCTTCCTGCAGATaGCTCCATCCTCGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLCSSCR*LHPRSA
Trigger: GGCGGAACGAGGATGGAGCCATCTGCAGGAAGAGCA...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGAGCTCCACGTCATTCTaGTCCTGGAAGTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELSSTSF*SWKWTL
Trigger: CAGCGTCCACTTCCAGGACCAGAATGACGTGGAGCT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTAGAAGCCCTGGTTTCTaGGGGGAACGTCTATGGACT +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCRSPGF*GERLWT
Trigger: AGTCCATAGACGTTCCCCCCAGAAACCAGGGCTTCT...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGGCAGATTTAATGTCTTaGGTTTTACCACGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: AVPGHMASTWLPGSREGEADLMS*VLPRSP
Trigger: AGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACAGCCCCTGGCCCTaGACGTGTCAGGAACTTTAT +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRHSPWP*TCQELY
Trigger: ATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGCACAGCCCCTGGCCCTaGACGTGTCAGGAACTTTAT +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMHSPWP*TCQELY
Trigger: ATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTG...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTCCACCACGTTGTACTaGATCGTGGACAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRSTTLY*IVDSGS
Trigger: GGAGCCACTGTCCACGATCCAGTACAACGTGGTGGA...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGCGCATTCTTTCTTCTTaGTGTTTTCAGGAATCCACG +
Preference number: 4 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRRILSS*CFQEST
Trigger: CGTGGATTCCTGAAAACATCAAGAAGAAAGAATGCG...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACCGCATTCTTTCTTCTTaGTGTTTTCAGGAATCCACG +
Preference number: 4 (lower is better)
Translates to: PGDRGELQAAVTQPLALDRILSS*CFQEST
Trigger: CGTGGATTCCTGAAAACATCAAGAAGAAAGAATGCG...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTCCACGAGGATGAAGTaGGAGTGGTTGCTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRSTRMK*EWLLSR
Trigger: CCTAGACAGCAACCACTCTCACTTCATCCTCGTGGA...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATGGTCTGCTCCGATATaGACTTCTCCAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLWSAPI*TSPAWS
Trigger: GGACCAGGCTGGAGAAGTTCATATCGGAGCAGACCA...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTACAGGCTTGTTGGAGATaGGTGCAGCTGTCATCGTGG +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLQACWR*VQLSSW
Trigger: CCACGATGACAGCTGCACTCATCTCCAACAAGCCTG...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAGCAAGGTGTCCCAGGTaGCAAACTCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLARCPR*QTPSAA
Trigger: TGCAGCTGAAGGAGTTTGTCACCTGGGACACCTTGC...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGCCTCGGACACGCGGGTaGGCAGTTTCTGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQPRTRG*AVSGLS
Trigger: AGAGAGCCCAGAAACTGCTCACCCGCGTGTCCGAGG...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCTGCAGTGCTCCGGGTTaGAGTTCACACCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKACSAPG*SSHRRC
Trigger: ACATCGACGGTGTGAACTTCAACCCGGAGCACTGCA...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTGCACGGGGAAGCGCGTaGCAGGGCAGTTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPARGSA*QGSWGR
Trigger: TCTACCCCAACTGCCCTGTCACGCGCTTCCCCGTGC...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTGCCTGTGCCCTGTCTTaGGCTCTCCTCCCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGACALS*ALLPGH
Trigger: GTGACCCGGGAGGAGAGCTCAAGACAGGGCACAGGC...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCCACGGAGTTTATCCTaGCAGTCAGGAGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPPRSLS*QSGVQT
Trigger: TGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGTGGTTCACGCTCCTGTaGGCTGTTGACACCAAACCA +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVEWFTLL*AVDTKP
Trigger: TGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCA...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGTGGTTCACGCTCCTGTaGGCTGTTGACACCAAACCA +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMWFTLL*AVDTKP
Trigger: TGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCA...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCCCTGCTGACCATCCTTaGCTTCCCGGAAGACAGTCA +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKAPADHP*LPGRQS
Trigger: TGACTGTCTTCCGGGAAGGCAAGGATGGTCAGCAGG...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTACCTGCTGACCATCCTTaGCTTCCCGGAAGACAGTCA +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLPADHP*LPGRQS
Trigger: TGACTGTCTTCCGGGAAGGCAAGGATGGTCAGCAGG...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGACAAACTCCTTCAGCTaGACCCCGTTCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELTNSFS*TPFSRK
Trigger: CTTCCTGGAGAACGGGGTGCAGCTGAAGGAGTTTGT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACACGAAGAGCAAGATTaGGCCGACGTCCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEHEEQD*ADVQLI
Trigger: AATAAGCTGGACGTCGGCGCAATCTTGCTCTTCGTG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCAAATCTGGTCCGTGTaGTCCTGCACCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCEQIWSV*SCTCWK
Trigger: CTTCCAGCAGGTGCAGGAGCACACGGACCAGATTTG...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCCTCTTGATGAAGAGCTaGAGGTGGCTGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSLLMKS*RWLRRM
Trigger: CATCCTCCTCAGCCACCTGCAGCTCTTCATCAAGAG...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCTTCTTGAGCTGCTTGTaGCTCTTGGCCGGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSFLSCL*LLAGVF
Trigger: GAAGACTCCGGCCAAGAGGCACAAGCAGCTCAAGAA...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGAGCTTGTTCTTGAGCTaGTTGTGCCTCTTGGCCGGA +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVESLFLS*LCLLAG
Trigger: TCCGGCCAAGAGGCACAAGCAGCTCAAGAACAAGCT...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCGCGTCCTTCCTCTCTaGCGTGTAAAAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCRVLPL*RVKGWV
Trigger: GACCCACCCTTTTACACGGCAGAGAGGAAGGACGCG...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGGTGCCCTGGAAGGTGTaGGGCTTGGTAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQVPWKV*GLVASS
Trigger: GGAGGAGGCTACCAAGCCCCACACCTTCCAGGGCAC...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCTGGACATGTTTCTTTaGGTCCCACTGTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRLDMFL*VPLCAL
Trigger: CAGGGCACACAGTGGGACCCAAAGAAACATGTCCAG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTGCCAAAGGCATCGGTTaGCATCTCCTGGACATGTTT +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCAKGIG*HLLDMF
Trigger: AAACATGTCCAGGAGATGCCAACCGATGCCTTTGGC...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGTATCTTGGATCTTTTTaGTCCACTCGACAATCCTGC +
Preference number: 4 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRYLGSF*STRQSC
Trigger: GCAGGATTGTCGAGTGGACCAAAAAGATCCAAGATA...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCTGGCCAAAGTGGTCTTaGCTCCGTGAGGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKAWPKWS*LREAFS
Trigger: GCTGAAAGCCTCACGGAGCCAAGACCACTTTGGCCA...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAACTGCCAGTTTCAGCTaGTGGTCCCAGTTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLTASFS*WSQFSW
Trigger: CCACGAGAACTGGGACCACCAGCTGAAACTGGCAGT...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGAGCTCCCGACGGTTCTaGACAATGGCCCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMSSRRF*TMAQMR
Trigger: TCTCATTTGGGCCATTGTCCAGAACCGTCGGGAGCT...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTATCAGGTCATGGCGCTaGAACTTCCAAATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCIRSWR*NFQIWS
Trigger: GGACCAGATTTGGAAGTTCCAGCGCCATGACCTGAT...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCATCAGGTCATGGCGCTaGAACTTCCAAATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAIRSWR*NFQIWS
Trigger: GGACCAGATTTGGAAGTTCCAGCGCCATGACCTGAT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCACGTCATTCTGGTCCTaGAAGTGGACGCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCTSFWS*KWTLTA
Trigger: GGCCGTCAGCGTCCACTTCCAGGACCAGAATGACGT...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCACCTCGAAACATaGAGGCCCTCTTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQARHLET*RPSWGE
Trigger: CTCTCCCCAAGAGGGCCTCCATGTTTCGAGGTGCCT...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGCTGTCCAGGGAAGGGTaGGCATCACCTCGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQLSREG*ASPRPV
Trigger: CACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGGTGGCTAGAGAGCTTTaGGTCAGGTGGAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRVAREL*VRWKTE
Trigger: CTCTGTCTTCCACCTGACCCAAAGCTCTCTAGCCAC...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTCCAGCTCGCTACACTaGGGTTCTAGAGACACATGG +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRSSSLH*GSRDTW
Trigger: CCATGTGTCTCTAGAACCCCAGTGTAGCGAGCTGGA...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS-3UTR TCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCAGGAATCCACGAACTaGGGCTTTCTTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDQESTN*GFLACH
Trigger: ATGACAAGCAAGAAAGCCTCAGTTCGTGGATTCCTG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR TCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCACACGATGGGGATCTTaGTGGCCACACCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKATRWGS*WPHLLF
Trigger: AAAGAGGAGGTGTGGCCATCAAGATCCCCATCGTGT...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGGTGGTCTTGGCTCCGTaGGGCTTTCAGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQVVLAP*GFQQGL
Trigger: CAGGCCTTGCTGAAAGCCTCACGGAGCCAAGACCAC...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCAGGCTTGTTGGAGATaGGTGCAGCTGTCATCGTGG +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCQACWR*VQLSSW
Trigger: CCACGATGACAGCTGCACTCATCTCCAACAAGCCTG...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTGGCGCTCGTTGTGGATaGGGATGGCCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGGARCG*GWPAWP
Trigger: TGGCCAAGCAGGCCATCCTCATCCACAACGAGCGCC...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGGCCCTCTGCGTCTCTTaGCAGGCCTGGGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQALCVS*QAWALS
Trigger: AGACAAAGCCCAGGCCTGTCAAGAGACGCAGAGGGC...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTACCACGTTCCCCTCCTaGGGGCCCTCATGGTTCACG +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPTTFPS*GPSWFT
Trigger: CGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGT...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCTTGCTTGTCATTGTTaGCGAAGGGGCACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCELACHC*RRGTVA
Trigger: GGCTACAGTGCCCCTTCGGCAACAATGACAAGCAAG...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCCTCTTTCCTTGGTCTaGTCCGATATGAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEPLSLV*SDMNFS
Trigger: GGAGAAGTTCATATCGGAGCAGACCAAGGAAAGAGG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAGTCCACGCGATTCCATaGCACTGCCAGTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAVHAIP*HCQFQL
Trigger: CAGCTGAAACTGGCAGTGGCATGGAATCGCGTGGAC...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGCCTTCAGGATCTTGCTaGAGGCCAAGGCCGCTGCGA +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQPSGSC*RPRPLR
Trigger: TCGCAGCGGCCTTGGCCTGCAGCAAGATCCTGAAGG...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGACTGAAGTACAAGGCTaGCTTCTTCATCAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMTEVQG*LLHQPA
Trigger: TGCGGGCTGATGAAGAAGGCAGCCTTGTACTTCAGT...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCTGATGGTAAAAATGTaGATGAGCCGGAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPLMVKM*MSRRQN
Trigger: GTTCTGCCTCCGGCTCATGCACATTTTTACCATCAG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCCTCCGTCTTCTTCCTaGCTCCCGGCTCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPPPSSS*LPAQHP
Trigger: CGGATGCTGAGCCGGGAGGCAGGAAGAAGACGGAGG...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAATCTTTATGCTCTTCCTaGAGATGGCTCCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLESLCSS*RWLHPR
Trigger: ACGAGGATGGAGCCATCTGCAGGAAGAGCATAAAGA...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACCAGCATCTTCTTTATaGTCTTCCTGCAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEPASSL*SSCRWL
Trigger: GAGCCATCTGCAGGAAGAGCATAAAGAAGATGCTGG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAGCTCTGAGTAGCCTGTaGCCTGTCTTGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAALSSL*PVLSSP
Trigger: AGGAGAGCTCAAGACAGGGCACAGGCTACTCAGAGC...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGTTTCCCAGACAGCCTTaGAAACATGCGAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMFPRQP*KHARVV
Trigger: AACCACCCTCGCATGTTTGCAAGGCTGTCTGGGAAA...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS-3UTR CCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCTCGGTTGGCATCTCCTaGACATGTTTCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSSVGIS*TCFFGS
Trigger: GGACCCAAAGAAACATGTCCAGGAGATGCCAACCGA...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGTCGGTTGGCATCTCCTaGACATGTTTCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMSVGIS*TCFFGS
Trigger: GGACCCAAAGAAACATGTCCAGGAGATGCCAACCGA...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGCCAAAGGCATCGGTTaGCATCTCCTGGACATGTTT +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMAKGIG*HLLDMF
Trigger: AAACATGTCCAGGAGATGCCAACCGATGCCTTTGGC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGTACTTTTTCACCTTCTaGCTCAGGCCCGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMYFFTF*LRPVKT
Trigger: CGTCTTCACGGGCCTGAGCCAGAAGGTGAAAAAGTA...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATACGCTCAGTTTCTGCTaGATCAGGGAGATAGTGATG +
Preference number: 4 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDTLSFC*IREIVM
Trigger: CATCACTATCTCCCTGATCCAGCAGAAACTGAGCGT...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCGTCTCAAACATCTCCTaGAAGAACACGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGVSNIS*KNTLSF
Trigger: GAAACTGAGCGTGTTCTTCCAGGAGATGTTTGAGAC...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCTCCGGACGATATCTTaGATCTTTTTGGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMELRTIS*IFLVHS
Trigger: CGAGTGGACCAAAAAGATCCAAGATATCGTCCGGAG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAGCTTGGGGACGATGCTaGAGCCCAGGTTTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLAWGRC*SPGLGK
Trigger: TTTTCCTAAACCTGGGCTCCAGCATCGTCCCCAAGC...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTTCTGGCTCAGGCCCGTaGAGACGATGTCGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPSGSGP*RRCRQR
Trigger: CCTTTGGCGACATCGTCTTCACGGGCCTGAGCCAGA...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCACTGCCACTCATCCATaGAGATCTCACTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCTATHP*RSHCGQ
Trigger: TTGCCCGCAGTGAGATCTTCATGGATGAGTGGCAGT...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTGGATGGGGTCCATGGTaGAGGTCACATGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGGWGPW*RSHGLR
Trigger: CCTCAGGCCATGTGACCTTCACCATGGACCCCATCC...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCCGTCAACCTTATTGCTaGTGTCCTCGATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSRQPYC*CPRSSA
Trigger: AGCAGAAGATCGAGGACATCAGCAATAAGGTTGACG...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCGTCAACCTTATTGCTaGTGTCCTCGATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQRQPYC*CPRSSA
Trigger: AGCAGAAGATCGAGGACATCAGCAATAAGGTTGACG...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCCTCCCGGGTCACCTTaGCCCCTTCCAGTTCATGAG +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPPPGSP*PLPVHE
Trigger: CTCATGAACTGGAAGGGGTCAAGGTGACCCGGGAGG...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCCAGGTTTAGGAAAATaGAGACAGGGAGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCEPGLGK*RQGADG
Trigger: CCCATCAGCTCCCTGTCTTCATTTTCCTAAACCTGG...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTGAACTGAGGCTTTCTTaGTTGTCATTGTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCELRLS*LSLLPK
Trigger: CTTCGGCAACAATGACAAGCAAGAAAGCCTCAGTTC...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCCTCTTTCCTTGGTCTaGTCCGATATGAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRPLSLV*SDMNFS
Trigger: GGAGAAGTTCATATCGGAGCAGACCAAGGAAAGAGG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGAACACGCTCAGTTTCTaGTGGATCAGGGAGATAGTG +
Preference number: 4 (lower is better)
Translates to: VRSSDSAPSPGQARLHVENTLSF*WIREIV
Trigger: CACTATCTCCCTGATCCAGCAGAAACTGAGCGTGTT...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGTCTGAAGGCTTCCACTaGCACTCATCCATGAAGATC +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELSEGFH*HSSMKI
Trigger: GATCTTCATGGATGAGTGGCAGTGGAAGCCTTCAGA...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCTTGTTGGAGATGAGTaGAGCTGTCATCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCLVGDE*SCHRGV
Trigger: CACCCCACGATGACAGCTGCACTCATCTCCAACAAG...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCACTCTTGATGAAGAGCTaGAGGTGGCTGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQALLMKS*RWLRRM
Trigger: CATCCTCCTCAGCCACCTGCAGCTCTTCATCAAGAG...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCCAGCATCTTCTTTATaGTCTTCCTGCAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRPASSL*SSCRWL
Trigger: GAGCCATCTGCAGGAAGAGCATAAAGAAGATGCTGG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCTTTGTACACCTCCATaGCGCACTTCAGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMELCTPP*RTSASF
Trigger: AAAACTTGCTGAAGTGCGGCATGGAGGTGTACAAAG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR GCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCCCGAGTCGCAGGCGTaGAGGTTAGAGTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPPESQA*RLEFSL
Trigger: CAGGCTGAACTCTAACCTGCACGCCTGCGACTCGGG...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGAGCCTCTGCAGGGGTaGCAGGGCACATTGGCACCA +
Preference number: 4 (lower is better)
Translates to: RPEMADLMSWVLPRSPPEEPLQG*QGTLAP
Trigger: TGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCACAGGTCAGGTTCCCTTaGCCATCCTCATCCAGTATG +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAQVRFP*PSSSSM
Trigger: CATACTGGATGAGGATGGCCAAGGGAACCTGACCTG...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGTCTCAAACATCTCCTaGAAGAACACGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEVSNIS*KNTLSF
Trigger: GAAACTGAGCGTGTTCTTCCAGGAGATGTTTGAGAC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGCCCGACCTCTTCAGTaGGTCCAGGTCCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RPEMADLMSWVLPRSPPEARPLQ*VQVQQV
Trigger: GACCTGCTGGACCTGGACCCACTGAAGAGGTCGGGC...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTGCCGTGTAAAAGGGTaGGTCATAGATCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRCRVKG*VIDQEL
Trigger: GAGTTCCTGATCTATGACCCACCCTTTTACACGGCA...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGACGTCATTCTGGTCCTaGAAGTGGACGCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQTSFWS*KWTLTA
Trigger: GGCCGTCAGCGTCCACTTCCAGGACCAGAATGACGT...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGAAGGAGGAGGGCATGTaGATGCCTGCATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQKEEGM*MPASWP
Trigger: AGGCCAGGATGCAGGCATCCACATGCCCTCCTCCTT...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGCTGGGGACAAGGGGGTaGCTAGAGAGCTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQLGTRG*LESFGS
Trigger: TGACCCAAAGCTCTCTAGCCACCCCCTTGTCCCCAG...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTATGCAGTCCTGGCTCTaGGCCCAGATGATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPMQSWL*AQMIPA
Trigger: GGCAGGAATCATCTGGGCTCAGAGCCAGGACTGCAT...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCACGGAGTTTATCCTaGCAGTCAGGAGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCPRSLS*QSGVQT
Trigger: TGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGG...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTGCTCCTGTGAGCTGTTaGCACCAAACCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGAPVSC*HQTRRP
Trigger: GGGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGC...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTGCTCCTGTGAGCTGTTaGCACCAAACCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPAPVSC*HQTRRP
Trigger: GGGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGC...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAACTGAGGCTTTCTTaGTTGTCATTGTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMELRLS*LSLLPK
Trigger: CTTCGGCAACAATGACAAGCAAGAAAGCCTCAGTTC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTGGCCTCTGCGGAAAATaGTCTTCAGCCGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGGLCGK*SSAAAS
Trigger: TGAAGCCGCGGCTGAAGAGCATTTTCCGCAGAGGCC...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTGGCCTCTGCGGAAAATaGTCTTCAGCCGCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPGLCGK*SSAAAS
Trigger: TGAAGCCGCGGCTGAAGAGCATTTTCCGCAGAGGCC...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATCTGAAGGCTTCCACTaGCACTCATCCATGAAGATC +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLSEGFH*HSSMKI
Trigger: GATCTTCATGGATGAGTGGCAGTGGAAGCCTTCAGA...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTGTTCCTTCAGGATCTTaGTGCAGGCCAAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGVPSGS*CRPRPL
Trigger: CAGCGGCCTTGGCCTGCAGCAAGATCCTGAAGGAAC...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTACTGATGGTAAAAATGTaGATGAGCCGGAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLLMVKM*MSRRQN
Trigger: GTTCTGCCTCCGGCTCATGCACATTTTTACCATCAG...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGCAAATCTGGTCCGTGTaGTCCTGCACCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQQIWSV*SCTCWK
Trigger: CTTCCAGCAGGTGCAGGAGCACACGGACCAGATTTG...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCGGGCCGCTGCTTTTaGTGGAACTGTCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGSGRCF*WNCRFW
Trigger: CCAGAACCGACAGTTCCAGCAAAAGCAGCGGCCCGA...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTTTCTGCTCGGGCCGCTaGTTTTGCTGGAACTGTCGG +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPFCSGR*FCWNCR
Trigger: CCGACAGTTCCAGCAAAAGCAGCGGCCCGAGCAGAA...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTCGCGTCCTTCCTCTCTaGCGTGTAAAAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGRVLPL*RVKGWV
Trigger: GACCCACCCTTTTACACGGCAGAGAGGAAGGACGCG...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTACTCTCCGGGGAACTTaGCTCAGGCCAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPTLRGT*LRPMTS
Trigger: GGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGT...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCCGAGATCAAGAGATTaGGGACGTCCAGCCCCCAGT +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPPRSRD*GRPAPS
Trigger: ACTGGGGGCTGGACGTCCCCAATCTCTTGATCTCGG...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGAGGGGGTGCCGTTGGTaGTGGCGTTGTCGATGGTGT +
Preference number: 4 (lower is better)
Translates to: RPEMADLMSWVLPRSPPERGCRW*WRCRWC
Trigger: ACACCATCGACAACGCCACCACCAACGGCACCCCCT...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCACGCTCAGTTTCTGCTaGATCAGGGAGATAGTGATG +
Preference number: 4 (lower is better)
Translates to: EGPHGSRSCELLTPNQKATLSFC*IREIVM
Trigger: CATCACTATCTCCCTGATCCAGCAGAAACTGAGCGT...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTATCTTGGATCTTTTTaGTCCACTCGACAATCCTGC +
Preference number: 4 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAYLGSF*STRQSC
Trigger: GCAGGATTGTCGAGTGGACCAAAAAGATCCAAGATA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTACTCCGGACGATATCTTaGATCTTTTTGGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLLRTIS*IFLVHS
Trigger: CGAGTGGACCAAAAAGATCCAAGATATCGTCCGGAG...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGCAAACTTCATGTCCTTaGCCTCCAGGGCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQQTSCP*PPGRAA
Trigger: TGCAGCTCGCCCTGGAGGCCAAGGACATGAAGTTTG...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGACCCGGCGCTCGTTGTaGATGAGGATGGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RPEMADLMSWVLPRSPPETRRSL*MRMACL
Trigger: CAAGCAGGCCATCCTCATCCACAACGAGCGCCGGGT...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTATGGGGTACAGCGTGTaGTTGGGTCCGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPMGYSV*LGPKQL
Trigger: CAGCTGCTTCGGACCCAACCACACGCTGTACCCCAT...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTGTGGTTCGCATAGAGTaGGATGCGCCTGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGVVRIE*DAPVHH
Trigger: GTGGTGGACAGGCGCATCCCACTCTATGCGAACCAC...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGCAGATTTAATGTCTTaGGTTTTACCACGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPADLMS*VLPRSP
Trigger: AGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGTCCACCACGTTGTACTaGATCGTGGACAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQSTTLY*IVDSGS
Trigger: GGAGCCACTGTCCACGATCCAGTACAACGTGGTGGA...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS-3UTR TCA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGCGCATTCTTTCTTCTTaGTGTTTTCAGGAATCCACG +
Preference number: 4 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELRILSS*CFQEST
Trigger: CGTGGATTCCTGAAAACATCAAGAAGAAAGAATGCG...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR GCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAACACGCTCAGTTTCTaGTGGATCAGGGAGATAGTG +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQANTLSF*WIREIV
Trigger: CACTATCTCCCTGATCCAGCAGAAACTGAGCGTGTT...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTGCTTTCAGCAAGGCCTaGAAGATGGCCACATCCACG +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPAFSKA*KMATST
Trigger: CGTGGATGTGGCCATCTTGCAGGCCTTGCTGAAAGC...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp TCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTTGTGGAAAGCACAGCTTGTTGGAGATGAGTaGAGCTGTCATCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SHSPWPWTCQELYLWKAQLVGDE*SCHRGV
Trigger: CACCCCACGATGACAGCTGCACTCATCTCCAACAAG...CTGTGCTTTCCACAAATAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGTATCTTGGATCTTTTTaGTCCACTCGACAATCCTGC +
Preference number: 4 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQYLGSF*STRQSC
Trigger: GCAGGATTGTCGAGTGGACCAAAAAGATCCAAGATA...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTGTGCAGCTGTCATCGTaGGGTGCAGATCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPVQLSS*GADLKA
Trigger: AGCCTTCAGATCTGCACCCCACGATGACAGCTGCAC...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCTGCCGTGTAAAAGGGTaGGTCATAGATCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCCRVKG*VIDQEL
Trigger: GAGTTCCTGATCTATGACCCACCCTTTTACACGGCA...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTTCCACGAGGATGAAGTaGGAGTGGTTGCTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPSTRMK*EWLLSR
Trigger: CCTAGACAGCAACCACTCTCACTTCATCCTCGTGGA...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGCGTCGTCCACGAGGATaGAGTGAGAGTGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RPEMADLMSWVLPRSPPERRPRG*SESGCC
Trigger: ACAGCAACCACTCTCACTTCATCCTCGTGGACGACG...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTTTCTTGAGCTGCTTGTaGCTCTTGGCCGGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPFLSCL*LLAGVF
Trigger: GAAGACTCCGGCCAAGAGGCACAAGCAGCTCAAGAA...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGATGTCCTCGATCTTCTaGTCGGGCCGCTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: RPEMADLMSWVLPRSPPEMSSIF*SGRCFC
Trigger: GCAAAAGCAGCGGCCCGAGCAGAAGATCGAGGACAT...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCAGCATCAGACAGTTTaGAACTTTCCACAAAATACA +
Preference number: 4 (lower is better)
Translates to: APSPGQARLHVEAPRNMEQHQTV*NFPQNT
Trigger: TGTATTTTGTGGAAAGTTCCAAACTGTCTGATGCTG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCAGCATCAGACAGTTTaGAACTTTCCACAAAATACA +
Preference number: 4 (lower is better)
Translates to: LAQARQGSMLRHLETWRPQHQTV*NFPQNT
Trigger: TGTATTTTGTGGAAAGTTCCAAACTGTCTGATGCTG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAACAGCATCAGACAGTTTaGAACTTTCCACAAAATACA +
Preference number: 4 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEQHQTV*NFPQNT
Trigger: TGTATTTTGTGGAAAGTTCCAAACTGTCTGATGCTG...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CCA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAGTCTCAAACATCTCCTaGAAGAACACGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAVSNIS*KNTLSF
Trigger: GAAACTGAGCGTGTTCTTCCAGGAGATGTTTGAGAC...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTAGAAGCCCTGGTTTCTaGGGGGAACGTCTATGGACT +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPRSPGF*GERLWT
Trigger: AGTCCATAGACGTTCCCCCCAGAAACCAGGGCTTCT...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR TCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGTCCACGAGGATGAAGTaGGAGTGGTTGCTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: RPEMADLMSWVLPRSPPESTRMK*EWLLSR
Trigger: CCTAGACAGCAACCACTCTCACTTCATCCTCGTGGA...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGTCTCCAGCTTGTTCTTaGGCTGCTTGTGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RPEMADLMSWVLPRSPPESPACS*AACASW
Trigger: CCAAGAGGCACAAGCAGCTCAAGAACAAGCTGGAGA...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCCACGGAGTTTATCCTaGCAGTCAGGAGTTCAGACA +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPPRSLS*QSGVQT
Trigger: TGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGG...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR GCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTCACGAAGAGCAAGATTaGGCCGACGTCCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGHEEQD*ADVQLI
Trigger: AATAAGCTGGACGTCGGCGCAATCTTGCTCTTCGTG...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCGGTTGGCATCTCCTaGACATGTTTCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGSVGIS*TCFFGS
Trigger: GGACCCAAAGAAACATGTCCAGGAGATGCCAACCGA...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR TCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTCAGGAATCCACGAACTaGGGCTTTCTTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGQESTN*GFLACH
Trigger: ATGACAAGCAAGAAAGCCTCAGTTCGTGGATTCCTG...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTCCTCTTTCCTTGGTCTaGTCCGATATGAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGPLSLV*SDMNFS
Trigger: GGAGAAGTTCATATCGGAGCAGACCAAGGAAAGAGG...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR GCA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCTGATGGTAAAAATGTaGATGAGCCGGAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPLMVKM*MSRRQN
Trigger: GTTCTGCCTCCGGCTCATGCACATTTTTACCATCAG...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS CCA 90 bp CGGCCACGCGGCCCGAGCCCTCCACAACCACACAGGGGGTGCCGTTaGTGGTGGCGTTGTCGATGGTGTGCAACGTGCCCGGGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: RPRGPSPPQPHRGCR*WWRCRWCATCPGRP
Trigger: AGGGCGGCCCGGGCACGTTGCACACCATCGACAACGCCACCACCAACGGCACCCCCTGTGTGGTTGTGGAGGGCTCGGGCCGCGTGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS TCA 90 bp CCGCGGCCTTCTGGGAGGCCAGAGTGGGGACGTCCGCCTCCGAGCTaGAGCCGCTGGCCCGCAGCGTCCTCACGATCCAGTGCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: PRPSGRPEWGRPPPS*SRWPAASSRSSAGL
Trigger: AAGCCCTGCACTGGATCGTGAGGACGCTGCGGGCCAGCGGCTTCAGCTCGGAGGCGGACGTCCCCACTCTGGCCTCCCAGAAGGCCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS-3UTR CAA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCCCTGCACGTTGAGCTaGACGTGGGGAACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGPCTLS*TWGTGS
Trigger: GCTGCCCGTTCCCCACGTCAAGCTCAACGTGCAGGG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGTCCGAGACAGGCAGGTaGGCCACCTGGGCAATGACG +
Preference number: 5 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGSETGR*ATWAMT
Trigger: CGTCATTGCCCAGGTGGCCAACCTGCCTGTCTCGGA...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGCCCTGCACGTTGAGCTaGACGTGGGGAACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PRLLLMPSLATWPARGSQPCTLS*TWGTGS
Trigger: GCTGCCCGTTCCCCACGTCAAGCTCAACGTGCAGGG...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGGGAGTAGGGAGGGAGAGCAGGGCACCTTCTCGTaGGGCACGGGGAAGCGCGTG +
Preference number: 5 (lower is better)
Translates to: AVPGHMASTWLPGSREGEQGTFS*GTGKRV
Trigger: CACGCGCTTCCCCGTGCCCAACGAGAAGGTGCCCTG...CTCTCCCTCCCTACTCCCTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS GCA 90 bp CGGGCATTCACGTGGTACTGTCGCCCGGCTCCTCCGTCTTCTTCCTaGTCCCGGCTCAGCATCCGGCTCCTCCGCGGCCTTCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: RAFTWYCRPAPPSSS*SRLSIRLLRGLLGG
Trigger: GCCTCCCAGAAGGCCGCGGAGGAGCCGGATGCTGAGCCGGGAGCAGGAAGAAGACGGAGGAGCCGGGCGACAGTACCACGTGAATGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621064.1
CDS-3UTR CAA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCTCACTCCCTGCACGTaGAGCTTGACGTGGGGAACG +
Preference number: 5 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGLTPCT*SLTWGT
Trigger: CGTTCCCCACGTCAAGCTCAACGTGCAGGGAGTGAG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCTCCACCCGGCGCTCGTaGTGGATGAGGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VQGRVGITSASAQWPGSPSTRRS*WMRMAC
Trigger: GCAGGCCATCCTCATCCACAACGAGCGCCGGGTGGA...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCTCGGGCCGCTGCTTTaGCTGGAACTGTCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGLGPLL*LELSVL
Trigger: CAGAACCGACAGTTCCAGCAAAAGCAGCGGCCCGAG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS GCA 90 bp GCGGGCGCGCAAGCCGGGCGCTCGGGATCCTCCACCAGCACCTTCTaGAGCTTGCTGTGGAACAGGCAGGAGGGGTCCAGGTTCTCGTAC +
Preference number: 5 (lower is better)
Translates to: AGAQAGRSGSSTSTF*SLLWNRQEGSRFSY
Trigger: GTACGAGAACCTGGACCCCTCCTGCCTGTTCCACAGCAAGCTGCAGAAGGTGCTGGTGGAGGATCCCGAGCGCCCGGCTTGCGCGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 90 bp CCCATGGGGTTCAGGGGCAACCCGGCCTGCACTGTGTACGGCCCGTaGAAGCTCCGGCGGTCCCTCAGGCCATCCACCACGTTGTACTGG +
Preference number: 5 (lower is better)
Translates to: PMGFRGNPACTVYGP*KLRRSLRPSTTLYW
Trigger: CCAGTACAACGTGGTGGATGGCCTGAGGGACCGCCGGAGCTTCCACGGGCCGTACACAGTGCAGGCCGGGTTGCCCCTGAACCCCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS-3UTR CAA 90 bp CCCCGCCTCCTGCTCATGCCGTCCCTGGCCACATGGCCAGCACGTGGCTCCCAGTTGCTGCGCCGGAGATaGGAGACCATCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PRLLLMPSLATWPARGSQLLRRR*ETIPRS
Trigger: TGACCTGGGGATGGTCTCCAATCTCCGGCGCAGCAA...CTGGGAGCCACGTGCTGGCCATGTGGCCAGGGACGGCATGAGCAGGAGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGTTGAAGAGGCTGCTGTaGCTGCGCCGGAGATTGGAG +
Preference number: 5 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGLKRLL*LRRRLE
Trigger: CTCCAATCTCCGGCGCAGCAACAGCAGCCTCTTCAA...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCTGCAGTGCTCCGGGTaGAAGTTCACACCGTCGATG +
Preference number: 5 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGLQCSG*KFTPSM
Trigger: CATCGACGGTGTGAACTTCAACCCGGAGCACTGCAG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGGTGCCAGGGCACATaGGCACCACCACGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: EPLQGCQGTLAPPRRGSQGCQGT*APPRRG
Trigger: TCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCC...TTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS TCA 90 bp AGACGGCCCCTCGGAACAGCCAGTCCACCCGGCGCTCGTTGTGGATaGGGATGGCCTGCTTGGCCACCCCGAAGGACACCACCCACACAG +
Preference number: 5 (lower is better)
Translates to: RRPLGTASPPGARCG*GWPAWPPRRTPPTQ
Trigger: CTGTGTGGGTGGTGTCCTTCGGGGTGGCCAAGCAGGCCATCCTCATCCACAACGAGCGCCGGGTGGACTGGCTGTTCCGAGGGGCCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 90 bp GAAGGCGAAGTAGGAGAGGATGTTCAGGTGGAAGACCACCACGGGTaGGGTGAAGAAGGCACGGGCGCGGGCCGCGGGGGTGCCCACATC +
Preference number: 5 (lower is better)
Translates to: EGEVGEDVQVEDHHG*GEEGTGAGRGGAHI
Trigger: GATGTGGGCACCCCCGCGGCCCGCGCCCGTGCCTTCTTCACCGCACCCGTGGTGGTCTTCCACCTGAACATCCTCTCCTACTTCGCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS-3UTR CAA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCTGGAAGGTGTGGGGCTaGGTAGCCTCCTCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: VQGRVGITSASAQWPGSPWKVWG*VASSKC
Trigger: GCACTTGGAGGAGGCTACCAAGCCCCACACCTTCCA...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGACACGCCACAGCCCATaGTCCACGGAGAGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LCRGARAHWHHHAGEAKETRHSP*STESWP
Trigger: GGGCCAGCTCTCCGTGGACAATGGGCTGTGGCGTGT...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCATGAGGATGGCCTGCTaGGCCACCCCGAAGGACACC +
Preference number: 5 (lower is better)
Translates to: LSREGWASPRPVLSGQAAMRMAC*ATPKDT
Trigger: GGTGTCCTTCGGGGTGGCCAAGCAGGCCATCCTCAT...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGATGAGGATGGCCTGCTaGGCCACCCCGAAGGACACC +
Preference number: 5 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRMRMAC*ATPKDT
Trigger: GGTGTCCTTCGGGGTGGCCAAGCAGGCCATCCTCAT...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCAGGGCACCTTCTCGTaGGGCACGGGGAAGCGCGTG +
Preference number: 5 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGQGTFS*GTGKRV
Trigger: CACGCGCTTCCCCGTGCCCAACGAGAAGGTGCCCTG...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGAACATGGAGGCCCTCTaGGGGAGAGTGGCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: LCRGARAHWHHHAGEAKENMEAL*GRVAGP
Trigger: GGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGTT...CTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGAGGCCATCCACCACGTaGTACTGGATCGTGGACAGT +
Preference number: 5 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGRPSTT*YWIVDS
Trigger: ACTGTCCACGATCCAGTACAACGTGGTGGATGGCCT...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS GCA 90 bp CGGAACAGCCAGTCCACCCGGCGCTCGTTGTGGATGAGGATGGCCTaGTTGGCCACCCCGAAGGACACCACCCACACAGCCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RNSQSTRRSLWMRMA*LATPKDTTHTASRK
Trigger: CTTCCTGCTGGCTGTGTGGGTGGTGTCCTTCGGGGTGGCCAAGCAGGCCATCCTCATCCACAACGAGCGCCGGGTGGACTGGCTGTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 90 bp CGGCTGCCTTCTGGAGGAGGGTCTTGTGGTTCGCATAGAGTGGGATaGGCCTGTCCACCACCTGCCATCGGATGGAGGCCCCCGAGTCGC +
Preference number: 5 (lower is better)
Translates to: RLPSGGGSCGSHRVG*ACPPPAIGWRPPSR
Trigger: GCGACTCGGGGGCCTCCATCCGATGGCAGGTGGTGGACAGGCGCATCCCACTCTATGCGAACCACAAGACCCTCCTCCAGAAGGCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS-3UTR CAA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCACCGAGATCAAGAGATaGGGGACGTCCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: LSREGWASPRPVLSGQAATEIKR*GTSSPQ
Trigger: CTGGGGGCTGGACGTCCCCAATCTCTTGATCTCGGT...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCACCGAGATCAAGAGATaGGGGACGTCCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGTEIKR*GTSSPQ
Trigger: CTGGGGGCTGGACGTCCCCAATCTCTTGATCTCGGT...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CTCCATCCGGAGCCTCTGCAGGGGTGCCAGGGCACATTGGCACCACCACGCAGGCTCACTCCCTGCACGTaGAGCTTGACGTGGGGAACG +
Preference number: 5 (lower is better)
Translates to: LHPEPLQGCQGTLAPPRRLTPCT*SLTWGT
Trigger: CGTTCCCCACGTCAAGCTCAACGTGCAGGGAGTGAG...CCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCTGCAGAGGCTCCGGATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCAGGGCACCTTCTCGTaGGGCACGGGGAAGCGCGTG +
Preference number: 5 (lower is better)
Translates to: APSPGQARLHVEAPRNMEQGTFS*GTGKRV
Trigger: CACGCGCTTCCCCGTGCCCAACGAGAAGGTGCCCTG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCGTCTCGATCCAGGCATaGTCCGTGTTCCTCGGGTCA +
Preference number: 5 (lower is better)
Translates to: VQGRVGITSASAQWPGSPVSIQA*SVFLGS
Trigger: TGACCCGAGGAACACGGACAATGCCTGGATCGAGAC...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCGGTCAGAGGAGAAACTaGGGGGTAGGGCTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: TEACPGKGGHHLGQCSVAGQRRN*GVGLRG
Trigger: GCCCCTCAGCCCTACCCCCAAGTTTCTCCTCTGACC...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS CCA 90 bp CTCAGCGGCTGCCTTCTGGAGGAGGGTCTTGTGGTTCGCATAGAGTaGGATGCGCCTGTCCACCACCTGCCATCGGATGGAGGCCCCCGA +
Preference number: 5 (lower is better)
Translates to: LSGCLLEEGLVVRIE*DAPVHHLPSDGGPR
Trigger: TCGGGGGCCTCCATCCGATGGCAGGTGGTGGACAGGCGCATCCCACTCTATGCGAACCACAAGACCCTCCTCCAGAAGGCAGCCGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS CCA 90 bp CTCCAGGGAGGCCAACCTCTGCTCCATGGAGCCCGACCTCTTCAGTaGGTCCAGGTCCAGCAGGTCCACCATGGCGTCAACCCTGCCATG +
Preference number: 5 (lower is better)
Translates to: LQGGQPLLHGARPLQ*VQVQQVHHGVNPAM
Trigger: CATGGCAGGGTTGACGCCATGGTGGACCTGCTGGACCTGGACCCACTGAAGAGGTCGGGCTCCATGGAGCAGAGGTTGGCCTCCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS-3UTR CAA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCTTGCTGCGCCGGAGATaGGAGACCATCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TEACPGKGGHHLGQCSVALLRRR*ETIPRS
Trigger: TGACCTGGGGATGGTCTCCAATCTCCGGCGCAGCAA...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCCCTGCACGTTGAGCTaGACGTGGGGAACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDPCTLS*TWGTGS
Trigger: GCTGCCCGTTCCCCACGTCAAGCTCAACGTGCAGGG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCTTGTTCTTGAGCTGCTaGTGCCTCTTGGCCGGAGTC +
Preference number: 5 (lower is better)
Translates to: VQGRVGITSASAQWPGSPLFLSC*CLLAGV
Trigger: GACTCCGGCCAAGAGGCACAAGCAGCTCAAGAACAA...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGTTCTCCAGCTTGTTCTaGAGCTGCTTGTGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGFSSLF*SCLCLL
Trigger: CAAGAGGCACAAGCAGCTCAAGAACAAGCTGGAGAA...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCGTCTCGATCCAGGCATaGTCCGTGTTCCTCGGGTCA +
Preference number: 5 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGVSIQA*SVFLGS
Trigger: TGACCCGAGGAACACGGACAATGCCTGGATCGAGAC...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS GCA 90 bp CGCAAGCCGGGCGCTCGGGATCCTCCACCAGCACCTTCTGCAGCTTaGTGTGGAACAGGCAGGAGGGGTCCAGGTTCTCGTACAGGTAGA +
Preference number: 5 (lower is better)
Translates to: RKPGARDPPPAPSAA*CGTGRRGPGSRTGR
Trigger: TCTACCTGTACGAGAACCTGGACCCCTCCTGCCTGTTCCACAGCAAGCTGCAGAAGGTGCTGGTGGAGGATCCCGAGCGCCCGGCTTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 90 bp TGGATCAGGGAGATAGTGATGTCCGAGACAGGCAGGTTGGCCACCTaGGCAATGACGTCGGCCACGCGGCCCGAGCCCTCCACAACCACA +
Preference number: 5 (lower is better)
Translates to: WIREIVMSETGRLAT*AMTSATRPEPSTTT
Trigger: TGTGGTTGTGGAGGGCTCGGGCCGCGTGGCCGACGTCATTGCCCAGGTGGCCAACCTGCCTGTCTCGGACATCACTATCTCCCTGATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS-3UTR CAA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCTCTTGCTTGTCATTGTaGCCGAAGGGGCACTGTAGC +
Preference number: 5 (lower is better)
Translates to: VQGRVGITSASAQWPGSPSCLSL*PKGHCS
Trigger: GCTACAGTGCCCCTTCGGCAACAATGACAAGCAAGA...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGCGAACTGAGGCTTTCTaGCTTGTCATTGTTGCCGAA +
Preference number: 5 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGRTEAF*LVIVAE
Trigger: TTCGGCAACAATGACAAGCAAGAAAGCCTCAGTTCG...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCGCCAAAGGCATCGGTaGGCATCTCCTGGACATGTT +
Preference number: 5 (lower is better)
Translates to: LSREGWASPRPVLSGQAARQRHR*ASPGHV
Trigger: AACATGTCCAGGAGATGCCAACCGATGCCTTTGGCG...GGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATACACAGGGGGTGCCGTaGGTGGTGGCGTTGTCGATG +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDTQGVP*VVALSM
Trigger: CATCGACAACGCCACCACCAACGGCACCCCCTGTGT...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACACACAGGGGGTGCCGTaGGTGGTGGCGTTGTCGATG +
Preference number: 5 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNTQGVP*VVALSM
Trigger: CATCGACAACGCCACCACCAACGGCACCCCCTGTGT...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTCCGAGACAGGCAGGTaGGCCACCTGGGCAATGACG +
Preference number: 5 (lower is better)
Translates to: LAQARQGSMLRHLETWRPSETGR*ATWAMT
Trigger: CGTCATTGCCCAGGTGGCCAACCTGCCTGTCTCGGA...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGACACGCCACAGCCCATaGTCCACGGAGAGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VRSSDSAPSPGQARLHVETRHSP*STESWP
Trigger: GGGCCAGCTCTCCGTGGACAATGGGCTGTGGCGTGT...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGACACGCCACAGCCCATaGTCCACGGAGAGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELTRHSP*STESWP
Trigger: GGGCCAGCTCTCCGTGGACAATGGGCTGTGGCGTGT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATTCCACCCGGCGCTCGTaGTGGATGAGGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHSTRRS*WMRMAC
Trigger: GCAGGCCATCCTCATCCACAACGAGCGCCGGGTGGA...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGTCCACCCGGCGCTCGTaGTGGATGAGGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VRSSDSAPSPGQARLHVESTRRS*WMRMAC
Trigger: GCAGGCCATCCTCATCCACAACGAGCGCCGGGTGGA...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp ACAGAGGCCTGTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCCTGCAGTGCTCCGGGTaGAAGTTCACACCGTCGATG +
Preference number: 5 (lower is better)
Translates to: TEACPGKGGHHLGQCSVALQCSG*KFTPSM
Trigger: CATCGACGGTGTGAACTTCAACCCGGAGCACTGCAG...GGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGACAGGCCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCTTGTTCTTGAGCTGCTaGTGCCTCTTGGCCGGAGTC +
Preference number: 5 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGLFLSC*CLLAGV
Trigger: GACTCCGGCCAAGAGGCACAAGCAGCTCAAGAACAA...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCAGGGCACCTTCTCGTaGGGCACGGGGAAGCGCGTG +
Preference number: 5 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCEQGTFS*GTGKRV
Trigger: CACGCGCTTCCCCGTGCCCAACGAGAAGGTGCCCTG...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CAA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGGGTACAGCGTGTGGTaGGGTCCGAAGCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: APSPGQARLHVEAPRNMEGYSVW*GPKQLR
Trigger: CCTCAGCTGCTTCGGACCCAACCACACGCTGTACCC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGAACATGGAGGCCCTCTaGGGGAGAGTGGCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELNMEAL*GRVAGP
Trigger: GGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGTT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp AGGGGTGCCAGGGCACATTGGCACCACCACGCAGGGGAAGCCAAGGAGGAGGGCAGGCAAGGCTCCATGTaGAGGCACCTCGAAACATGG +
Preference number: 5 (lower is better)
Translates to: RGARAHWHHHAGEAKEEGRQGSM*RHLETW
Trigger: CCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCT...GCCCTCCTCCTTGGCTTCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGGGCCCAGCTGCACAGGCCCAGCCCCTCGCCTGATGGCCAAGGGTCCCAGGGGGGCAGATTTAATGTCTaGGGTTTTACCACGTTCCCC +
Preference number: 5 (lower is better)
Translates to: RAQLHRPSPSPDGQGSQGGRFNV*GFTTFP
Trigger: GGGGAACGTGGTAAAACCCAAGACATTAAATCTGCC...CCCCTGGGACCCTTGGCCATCAGGCGAGGGGCTGGGCCTGTGCAGCTGGGCCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS TCA 90 bp CCGAGATCAAGAGATTGGGGACGTCCAGCCCCCAGTGCTGGGTCATaGGGTGGTAGATCACGCTGGAGGGCGTGTCCTGGGAGACTCGGA +
Preference number: 5 (lower is better)
Translates to: PRSRDWGRPAPSAGS*GGRSRWRACPGRLG
Trigger: TCCGAGTCTCCCAGGACACGCCCTCCAGCGTGATCTACCACCTCATGACCCAGCACTGGGGGCTGGACGTCCCCAATCTCTTGATCTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
CDS GCA 90 bp CCCAGCCTGAGGGCACAGTCAGTAGTGAGCCCCGAACTCAGCGGCTaGCTTCTGGAGGAGGGTCTTGTGGTTCGCATAGAGTGGGATGCG +
Preference number: 5 (lower is better)
Translates to: PSLRAQSVVSPELSG*LLEEGLVVRIEWDA
Trigger: CGCATCCCACTCTATGCGAACCACAAGACCCTCCTCCAGAAGGCAGCCGCTGAGTTCGGGGCTCACTACTGACTGTGCCCTCAGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS-3UTR CAA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTTGCTGCGCCGGAGATaGGAGACCATCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PSPGQARLHVEAPRNMEALLRRR*ETIPRS
Trigger: TGACCTGGGGATGGTCTCCAATCTCCGGCGCAGCAA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATTGGAAGGTGTGGGGCTaGGTAGCCTCCTCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDWKVWG*VASSKC
Trigger: GCACTTGGAGGAGGCTACCAAGCCCCACACCTTCCA...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTACCGAGATCAAGAGATaGGGGACGTCCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCTEIKR*GTSSPQ
Trigger: CTGGGGGCTGGACGTCCCCAATCTCTTGATCTCGGT...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCCGTTGGTGGTGGCGTaGTCGATGGTGTGCAACGTG +
Preference number: 5 (lower is better)
Translates to: APSPGQARLHVEAPRNMEPLVVA*SMVCNV
Trigger: CACGTTGCACACCATCGACAACGCCACCACCAACGG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGACACAGGGGGTGCCGTaGGTGGTGGCGTTGTCGATG +
Preference number: 5 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMTQGVP*VVALSM
Trigger: CATCGACAACGCCACCACCAACGGCACCCCCTGTGT...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGTCCGAGACAGGCAGGTaGGCCACCTGGGCAATGACG +
Preference number: 5 (lower is better)
Translates to: VRSSDSAPSPGQARLHVESETGR*ATWAMT
Trigger: CGTCATTGCCCAGGTGGCCAACCTGCCTGTCTCGGA...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGATGAGGATGGCCTGCTaGGCCACCCCGAAGGACACC +
Preference number: 5 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELMRMAC*ATPKDT
Trigger: GGTGTCCTTCGGGGTGGCCAAGCAGGCCATCCTCAT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGGGTACAGCGTGTGGTaGGGTCCGAAGCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMGYSVW*GPKQLR
Trigger: CCTCAGCTGCTTCGGACCCAACCACACGCTGTACCC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTGACTCTCCGGGGAACTaGCCTCAGGCCAATGACCTC +
Preference number: 5 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCDSPGN*PQANDL
Trigger: GAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTC...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGACTCTCCGGGGAACTaGCCTCAGGCCAATGACCTC +
Preference number: 5 (lower is better)
Translates to: APSPGQARLHVEAPRNMEDSPGN*PQANDL
Trigger: GAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCGGTCAGAGGAGAAACTaGGGGGTAGGGCTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSGQRRN*GVGLRG
Trigger: GCCCCTCAGCCCTACCCCCAAGTTTCTCCTCTGACC...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCGGGTGCCAGGGCACATaGGCACCACCACGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCGCQGT*APPRRG
Trigger: TCCCCTGCGTGGTGGTGCCAATGTGCCCTGGCACCC...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS TCA 90 bp GAATCTCCACCCCGTACTGGCCGTGGGTCCCGTCGTCCACGAGGATaGAGTGAGAGTGGTTGCTGTCTAGGCAGGTCAGGTTCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: ESPPRTGRGSRRPRG*SESGCCLGRSGSLG
Trigger: GCCAAGGGAACCTGACCTGCCTAGACAGCAACCACTCTCACTTCATCCTCGTGGACGACGGGACCCACGGCCAGTACGGGGTGGAGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 90 bp GCAAGGCCTGCAAGATGGCCACATCCACGTCCTGCTGACCATCCTTaGCTTCCCGGAAGACAGTCAGCAGCTGCCGCCTCCGGACGATAT +
Preference number: 5 (lower is better)
Translates to: ARPARWPHPRPADHP*LPGRQSAAAASGRY
Trigger: ATATCGTCCGGAGGCGGCAGCTGCTGACTGTCTTCCGGGAAGGCAAGGATGGTCAGCAGGACGTGGATGTGGCCATCTTGCAGGCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 90 bp CAGGGTGTCTCCCATGGGGTCCATGGCGGCCGCGTCCTTCCTCTCTaGCGTGTAAAAGGGTGGGTCATAGATCAGGAACTCCGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: QGVSHGVHGGRVLPL*RVKGWVIDQELRLP
Trigger: TGGGAGACGGAGTTCCTGATCTATGACCCACCCTTTTACACGGCAGAGAGGAAGGACGCGGCCGCCATGGACCCCATGGGAGACACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 90 bp CTCCAGGGAGGCCAACCTCTGCTCCATGGAGCCCGACCTCTTCAGTaGGTCCAGGTCCAGCAGGTCCACCATGGCGTCAACCTTATTGCT +
Preference number: 5 (lower is better)
Translates to: LQGGQPLLHGARPLQ*VQVQQVHHGVNLIA
Trigger: AGCAATAAGGTTGACGCCATGGTGGACCTGCTGGACCTGGACCCACTGAAGAGGTCGGGCTCCATGGAGCAGAGGTTGGCCTCCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000498430.5
CDS-3UTR CAA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGGAAGGTGTGGGGCTaGGTAGCCTCCTCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSWKVWG*VASSKC
Trigger: GCACTTGGAGGAGGCTACCAAGCCCCACACCTTCCA...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATCCGTTGGTGGTGGCGTaGTCGATGGTGTGCAACGTG +
Preference number: 5 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHPLVVA*SMVCNV
Trigger: CACGTTGCACACCATCGACAACGCCACCACCAACGG...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACCCTCCGGACGATATCTaGGATCTTTTTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: PGDRGELQAAVTQPLALDPPDDI*DLFGPL
Trigger: GAGTGGACCAAAAAGATCCAAGATATCGTCCGGAGG...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATTGGTGCATCTGCAGCTaGCTGTGGAACAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDWCICS*LWNRQE
Trigger: CTCCTGCCTGTTCCACAGCAAGCTGCAGATGCACCA...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300481.13
CDS-3UTR CAA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGCTCACTCCCTGCACGTaGAGCTTGACGTGGGGAACG +
Preference number: 5 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMLTPCT*SLTWGT
Trigger: CGTTCCCCACGTCAAGCTCAACGTGCAGGGAGTGAG...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACAAACTTCATGTCCTaGGCCTCCAGGGCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: QTVPLAQARQGSMLRHLETNFMS*ASRASC
Trigger: GCAGCTCGCCCTGGAGGCCAAGGACATGAAGTTTGT...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATACAAACTTCATGTCCTaGGCCTCCAGGGCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDTNFMS*ASRASC
Trigger: GCAGCTCGCCCTGGAGGCCAAGGACATGAAGTTTGT...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGAGCTGCTTGTGCCTCTaGGCCGGAGTCTTCAGGACC +
Preference number: 5 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMSCLCL*AGVFRT
Trigger: GGTCCTGAAGACTCCGGCCAAGAGGCACAAGCAGCT...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACTTCTCCAGCTTGTTCTaGAGCTGCTTGTGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PGDRGELQAAVTQPLALDFSSLF*SCLCLL
Trigger: CAAGAGGCACAAGCAGCTCAAGAACAAGCTGGAGAA...GTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAGGGTACAGCGTGTGGTaGGGTCCGAAGCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLGYSVW*GPKQLR
Trigger: CCTCAGCTGCTTCGGACCCAACCACACGCTGTACCC...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCGTCTCGATCCAGGCATaGTCCGTGTTCCTCGGGTCA +
Preference number: 5 (lower is better)
Translates to: LAQARQGSMLRHLETWRPVSIQA*SVFLGS
Trigger: TGACCCGAGGAACACGGACAATGCCTGGATCGAGAC...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATGACTCTCCGGGGAACTaGCCTCAGGCCAATGACCTC +
Preference number: 5 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHDSPGN*PQANDL
Trigger: GAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTC...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CAA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCAACATGGAGGCCCTCTaGGGGAGAGTGGCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCNMEAL*GRVAGP
Trigger: GGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGTT...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCGCTCCTGTGAGCTGTaGACACCAAACCAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDRSCEL*TPNQKA
Trigger: GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CAA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTCGCTCCTGTGAGCTGTaGACACCAAACCAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCRSCEL*TPNQKA
Trigger: GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCG...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CAA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCAGCACCTTCTGCAGCTaGCTGTGGAACAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: PSPGQARLHVEAPRNMEASTFCS*LWNRQE
Trigger: CTCCTGCCTGTTCCACAGCAAGCTGCAGAAGGTGCT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGAGCACCTTCTGCAGCTaGCTGTGGAACAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: APSPGQARLHVEAPRNMESTFCS*LWNRQE
Trigger: CTCCTGCCTGTTCCACAGCAAGCTGCAGAAGGTGCT...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS CCA 90 bp CAGGCGTGCAGGTTAGAGTTCAGCCTGTTCAGCTCCACGTCATTCTaGTCCTGGAAGTGGACGCTGACGGCCACCGTCTCGATCCAGGCA +
Preference number: 5 (lower is better)
Translates to: QACRLEFSLFSSTSF*SWKWTLTATVSIQA
Trigger: TGCCTGGATCGAGACGGTGGCCGTCAGCGTCCACTTCCAGGACCAGAATGACGTGGAGCTGAACAGGCTGAACTCTAACCTGCACGCCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCCTGGACATGTTTCTTaGGGTCCCACTGTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDPGHVS*GPTVCP
Trigger: AGGGCACACAGTGGGACCCAAAGAAACATGTCCAGG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGCCTGGACATGTTTCTTaGGGTCCCACTGTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: APSPGQARLHVEAPRNMEPGHVS*GPTVCP
Trigger: AGGGCACACAGTGGGACCCAAAGAAACATGTCCAGG...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCGCCAAAGGCATCGGTaGGCATCTCCTGGACATGTT +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDRQRHR*ASPGHV
Trigger: AACATGTCCAGGAGATGCCAACCGATGCCTTTGGCG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCAGGTCAGGTTCCCTaGGCCATCCTCATCCAGTAT +
Preference number: 5 (lower is better)
Translates to: APSPGQARLHVEAPRNMEAGQVP*AILIQY
Trigger: ATACTGGATGAGGATGGCCAAGGGAACCTGACCTGC...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCACACGATGGGGATCTaGATGGCCACACCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: LAQARQGSMLRHLETWRPHTMGI*MATPPL
Trigger: AAGAGGAGGTGTGGCCATCAAGATCCCCATCGTGTG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCAGTTCCTTCAGGATCTaGCTGCAGGCCAAGGCCGCT +
Preference number: 5 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSSSFRI*LQAKAA
Trigger: AGCGGCCTTGGCCTGCAGCAAGATCCTGAAGGAACT...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGAGTTCCTTCAGGATCTaGCTGCAGGCCAAGGCCGCT +
Preference number: 5 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQSSFRI*LQAKAA
Trigger: AGCGGCCTTGGCCTGCAGCAAGATCCTGAAGGAACT...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGAGTTCCTTCAGGATCTaGCTGCAGGCCAAGGCCGCT +
Preference number: 5 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMSSFRI*LQAKAA
Trigger: AGCGGCCTTGGCCTGCAGCAAGATCCTGAAGGAACT...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATCCACGAAGAGCAAGATaGCGCCGACGTCCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDPRRAR*RRRPAY
Trigger: ATAAGCTGGACGTCGGCGCAATCTTGCTCTTCGTGG...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCTGCAGTGCTCCGGGTaGAAGTTCACACCGTCGATG +
Preference number: 5 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRLQCSG*KFTPSM
Trigger: CATCGACGGTGTGAACTTCAACCCGGAGCACTGCAG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTCAGGACCACCCTCTaGATGAAGAGCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNFRTTL*MKSCRW
Trigger: CCACCTGCAGCTCTTCATCAAGAGGGTGGTCCTGAA...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAATTCAGGACCACCCTCTaGATGAAGAGCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: QTVPLAQARQGSMLRHLEFRTTL*MKSCRW
Trigger: CCACCTGCAGCTCTTCATCAAGAGGGTGGTCCTGAA...TTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCTTGTTCTTGAGCTGCTaGTGCCTCTTGGCCGGAGTC +
Preference number: 5 (lower is better)
Translates to: PSPGQARLHVEAPRNMEALFLSC*CLLAGV
Trigger: GACTCCGGCCAAGAGGCACAAGCAGCTCAAGAACAA...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTACTCGGGCCGCTGCTTTaGCTGGAACTGTCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLLGPLL*LELSVL
Trigger: CAGAACCGACAGTTCCAGCAAAAGCAGCGGCCCGAG...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGTCTCGATCCAGGCATaGTCCGTGTTCCTCGGGTCA +
Preference number: 5 (lower is better)
Translates to: SAPSPGQARLHVEAPRNMVSIQA*SVFLGS
Trigger: TGACCCGAGGAACACGGACAATGCCTGGATCGAGAC...CATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTAGGCAAGGCTCCATGTaGAGGCACCTCGAAACATGG +
Preference number: 5 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCRQGSM*RHLETW
Trigger: CCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCT...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCAGGCAAGGCTCCATGTaGAGGCACCTCGAAACATGG +
Preference number: 5 (lower is better)
Translates to: PSPGQARLHVEAPRNMEARQGSM*RHLETW
Trigger: CCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATAGGCAAGGCTCCATGTaGAGGCACCTCGAAACATGG +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDRQGSM*RHLETW
Trigger: CCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCT...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
ENST00000621064.1
CDS-3UTR CAA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATCGCTCCTGTGAGCTGTaGACACCAAACCAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHRSCEL*TPNQKA
Trigger: GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCG...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CAA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTAGGCCATCCACCACGTaGTACTGGATCGTGGACAGT +
Preference number: 5 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCRPSTT*YWIVDS
Trigger: ACTGTCCACGATCCAGTACAACGTGGTGGATGGCCT...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300482.9
ENST00000397932.6
CDS GCA 90 bp CGCCGGGATGAGCCTGCAGGTCAGCCCTGCCACGAAGAGCAAGATTaGGCCGACGTCCAGCTTATTCCAGAAGTCACTGAAGTACAAGGC +
Preference number: 5 (lower is better)
Translates to: RRDEPAGQPCHEEQD*ADVQLIPEVTEVQG
Trigger: GCCTTGTACTTCAGTGACTTCTGGAATAAGCTGGACGTCGGCGCAATCTTGCTCTTCGTGGCAGGGCTGACCTGCAGGCTCATCCCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 90 bp AGGTCCACCATGGCGTCAACCCTGCCATGTTTTCCCAGACAGCCTTaGAAACATGCGAGGGTGGTTACTGGAGCCTTCTCGGACCCGCGT +
Preference number: 5 (lower is better)
Translates to: RSTMASTLPCFPRQP*KHARVVTGAFSDPR
Trigger: ACGCGGGTCCGAGAAGGCTCCAGTAACCACCCTCGCATGTTTGCAAGGCTGTCTGGGAAAACATGGCAGGGTTGACGCCATGGTGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS CCA 90 bp CGATTCCATGCCACTGCCAGTTTCAGCTGGTGGTCCCAGTTCTCGTaGCCAAAGTGGTCTTGGCTCCGTGAGGCTTTCAGCAAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RFHATASFSWWSQFS*PKWSWLREAFSKAC
Trigger: GCAGGCCTTGCTGAAAGCCTCACGGAGCCAAGACCACTTTGGCCACGAGAACTGGGACCACCAGCTGAAACTGGCAGTGGCATGGAATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS-3UTR CAA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTATTGAAGAGGCTGCTGTaGCTGCGCCGGAGATTGGAG +
Preference number: 5 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLLKRLL*LRRRLE
Trigger: CTCCAATCTCCGGCGCAGCAACAGCAGCCTCTTCAA...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTCTTGCTTGTCATTGTaGCCGAAGGGGCACTGTAGC +
Preference number: 5 (lower is better)
Translates to: LAQARQGSMLRHLETWRPSCLSL*PKGHCS
Trigger: GCTACAGTGCCCCTTCGGCAACAATGACAAGCAAGA...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGCGCCAAAGGCATCGGTaGGCATCTCCTGGACATGTT +
Preference number: 5 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELRQRHR*ASPGHV
Trigger: AACATGTCCAGGAGATGCCAACCGATGCCTTTGGCG...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCACACGATGGGGATCTaGATGGCCACACCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQHTMGI*MATPPL
Trigger: AAGAGGAGGTGTGGCCATCAAGATCCCCATCGTGTG...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GTCCAGGGAAGGGTGGGCATCACCTCGGCCAGTGCTCAGTGGCCAGGCAGCCCCATATCTTGGATCTTTTaGGTCCACTCGACAATCCTG +
Preference number: 5 (lower is better)
Translates to: VQGRVGITSASAQWPGSPISWIF*VHSTIL
Trigger: CAGGATTGTCGAGTGGACCAAAAAGATCCAAGATAT...GGGGCTGCCTGGCCACTGAGCACTGGCCGAGGTGATGCCCACCCTTCCCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTAACAAACTTCATGTCCTaGGCCTCCAGGGCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLTNFMS*ASRASC
Trigger: GCAGCTCGCCCTGGAGGCCAAGGACATGAAGTTTGT...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGTTCAGGACCACCCTCTaGATGAAGAGCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELFRTTL*MKSCRW
Trigger: CCACCTGCAGCTCTTCATCAAGAGGGTGGTCCTGAA...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCGACTCTCCGGGGAACTaGCCTCAGGCCAATGACCTC +
Preference number: 5 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCDSPGN*PQANDL
Trigger: GAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTC...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATTTTTCCCAGACAGCCTaGCAAACATGCGAGGGTGGT +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDFSQTA*QTCEGG
Trigger: ACCACCCTCGCATGTTTGCAAGGCTGTCTGGGAAAA...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS TCA 90 bp CTTGCTTGTCATTGTTGCCGAAGGGGCACTGTAGCCTCCAGCTCTTaGAGAGGCTGCTGTTGCTGCGCCGGAGATTGGAGACCATCCCCA +
Preference number: 5 (lower is better)
Translates to: LACHCCRRGTVASSS*RGCCCCAGDWRPSP
Trigger: TGGGGATGGTCTCCAATCTCCGGCGCAGCAACAGCAGCCTCTTCAAGAGCTGGAGGCTACAGTGCCCCTTCGGCAACAATGACAAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS TCA 90 bp AATGAGAAGGTCACGGATGGGGTCCATGGTGAAGGTCACATGGCCTaGGGAACGCTTGTAGAGGGACCGGAGGCTCACTCCCTGCACGTT +
Preference number: 5 (lower is better)
Translates to: NEKVTDGVHGEGHMA*GTLVEGPEAHSLHV
Trigger: AACGTGCAGGGAGTGAGCCTCCGGTCCCTCTACAAGCGTTCCTCAGGCCATGTGACCTTCACCATGGACCCCATCCGTGACCTTCTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 90 bp GATGTCGCCAAAGGCATCGGTTGGCATCTCCTGGACATGTTTCTTTaGGTCCCACTGTGTGCCCTGGAAGGTGTGGGGCTTGGTAGCCTC +
Preference number: 5 (lower is better)
Translates to: DVAKGIGWHLLDMFL*VPLCALEGVGLGSL
Trigger: GAGGCTACCAAGCCCCACACCTTCCAGGGCACACAGTGGGACCCAAAGAAACATGTCCAGGAGATGCCAACCGATGCCTTTGGCGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS CCA 90 bp TGCAGGTTAGAGTTCAGCCTGTTCAGCTCCACGTCATTCTGGTCCTaGAAGTGGACGCTGACGGCCACCGTCTCGATCCAGGCATTGTCC +
Preference number: 5 (lower is better)
Translates to: CRLEFSLFSSTSFWS*KWTLTATVSIQALS
Trigger: GGACAATGCCTGGATCGAGACGGTGGCCGTCAGCGTCCACTTCCAGGACCAGAATGACGTGGAGCTGAACAGGCTGAACTCTAACCTGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS-3UTR CAA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGCTGAGGCTTTCTTGCTaGTCATTGTTGCCGAAGGGG +
Preference number: 5 (lower is better)
Translates to: VRSSDSAPSPGQARLHVELRLSC*SLLPKG
Trigger: CCCCTTCGGCAACAATGACAAGCAAGAAAGCCTCAG...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCACACCTCCTCTTTCCTaGGTCTGCTCCGATATGAAC +
Preference number: 5 (lower is better)
Translates to: LAQARQGSMLRHLETWRPTPPLS*VCSDMN
Trigger: GTTCATATCGGAGCAGACCAAGGAAAGAGGAGGTGT...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACACAAACTCAGGCTTGTaGGAGATGAGTGCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNTNSGL*EMSAAV
Trigger: GACAGCTGCACTCATCTCCAACAAGCCTGAGTTTGT...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCCCACGAAGAGCAAGATaGCGCCGACGTCCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: EGPHGSRSCELLTPNQKAPRRAR*RRRPAY
Trigger: ATAAGCTGGACGTCGGCGCAATCTTGCTCTTCGTGG...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATTTCACAATGATGATCTaGGGCCCCAGCGTCTTACTG +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDFTMMI*GPSVLL
Trigger: CAGTAAGACGCTGGGGCCCAAGATCATCATTGTGAA...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTTCACAATGATGATCTaGGGCCCCAGCGTCTTACTG +
Preference number: 5 (lower is better)
Translates to: LAQARQGSMLRHLETWRPFTMMI*GPSVLL
Trigger: CAGTAAGACGCTGGGGCCCAAGATCATCATTGTGAA...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCTTCTCCAGCTTGTTCTaGAGCTGCTTGTGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LAQARQGSMLRHLETWRPFSSLF*SCLCLL
Trigger: CAAGAGGCACAAGCAGCTCAAGAACAAGCTGGAGAA...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGTCGTTCTTCTCCAGCTaGTTCTTGAGCTGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: APSPGQARLHVEAPRNMESFFSS*FLSCLC
Trigger: GCACAAGCAGCTCAAGAACAAGCTGGAGAAGAACGA...CTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCATGGCGTCAACCTTATaGCTGATGTCCTCGATCTTC +
Preference number: 5 (lower is better)
Translates to: KLTGGSRRTSGSRHTAPGMASTL*LMSSIF
Trigger: GAAGATCGAGGACATCAGCAATAAGGTTGACGCCAT...GCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTAACATGGAGGCCCTCTaGGGGAGAGTGGCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPNMEAL*GRVAGP
Trigger: GGGCCCTGCCACTCTCCCCAAGAGGGCCTCCATGTT...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CAA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGTCCAGCCCTGCCTTATaGCTGATGTCCTCGATCTTC +
Preference number: 5 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRSSPAL*LMSSIF
Trigger: GAAGATCGAGGACATCAGCAATAAGGCAGGGCTGGA...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS TCA 90 bp CCTGGGAGACTCGGACGTACTTTTTCACCTTCTGGCTCAGGCCCGTaGAGACGATGTCGCCAAAGGCATCGGTTGGCATCTCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: PGRLGRTFSPSGSGP*RRCRQRHRLASPGH
Trigger: ATGTCCAGGAGATGCCAACCGATGCCTTTGGCGACATCGTCTTCACGGGCCTGAGCCAGAAGGTGAAAAAGTACGTCCGAGTCTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
CDS TCA 90 bp AGGAGGGGTCCAGGTTCTCGTACAGGTAGAGCAAGGTGTCCCAGGTaGCAAACTCCTTCAGCTGCACCCCGTTCTCCAGGAAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: RRGPGSRTGRARCPR*QTPSAAPRSPGRAS
Trigger: TGAAGCTCTTCCTGGAGAACGGGGTGCAGCTGAAGGAGTTTGTCACCTGGGACACCTTGCTCTACCTGTACGAGAACCTGGACCCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 90 bp TTAGAGTTCAGCCTGTTCAGCTCCACGTCATTCTGGTCCTGGAAGTaGACGCTGACGGCCACCGTCTCGATCCAGGCATTGTCCGTGTTC +
Preference number: 5 (lower is better)
Translates to: LEFSLFSSTSFWSWK*TLTATVSIQALSVF
Trigger: GAACACGGACAATGCCTGGATCGAGACGGTGGCCGTCAGCGTCCACTTCCAGGACCAGAATGACGTGGAGCTGAACAGGCTGAACTCTAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS-3UTR CAA 90 bp CAGCAGACTTGCGGCAGCCGTGAGGGGCACTGGGTCCACCAAACCCCATCATGTCGAACTGAGGCTTTCTaGCTTGTCATTGTTGCCGAA +
Preference number: 5 (lower is better)
Translates to: QQTCGSREGHWVHQTPSCRTEAF*LVIVAE
Trigger: TTCGGCAACAATGACAAGCAAGAAAGCCTCAGTTCG...ACATGATGGGGTTTGGTGGACCCAGTGCCCCTCACGGCTGCCGCAAGTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGACACCTCCTCTTTCCTaGGTCTGCTCCGATATGAAC +
Preference number: 5 (lower is better)
Translates to: VRSSDSAPSPGQARLHVETPPLS*VCSDMN
Trigger: GTTCATATCGGAGCAGACCAAGGAAAGAGGAGGTGT...CTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGACACCTCCTCTTTCCTaGGTCTGCTCCGATATGAAC +
Preference number: 5 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELTPPLS*VCSDMN
Trigger: GTTCATATCGGAGCAGACCAAGGAAAGAGGAGGTGT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCCTCCGGACGATATCTaGGATCTTTTTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRPPDDI*DLFGPL
Trigger: GAGTGGACCAAAAAGATCCAAGATATCGTCCGGAGG...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp TGTGAGCTGTTGACACCAAACCAGAAGGCCCCCACGTCCCCGCCTCCTGCTCATACAAACTCAGGCTTGTaGGAGATGAGTGCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: CELLTPNQKAPTSPPPAHTNSGL*EMSAAV
Trigger: GACAGCTGCACTCATCTCCAACAAGCCTGAGTTTGT...ATGAGCAGGAGGCGGGGACGTGGGGGCCTTCTGGTTTGGTGTCAACAGCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGACAAACTCAGGCTTGTaGGAGATGAGTGCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELTNSGL*EMSAAV
Trigger: GACAGCTGCACTCATCTCCAACAAGCCTGAGTTTGT...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGGAGAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTCACAAACTCAGGCTaGTTGGAGATGAGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RRTSGSRHTAPGPGRVRNFTNSG*LEMSAA
Trigger: AGCTGCACTCATCTCCAACAAGCCTGAGTTTGTGAA...GTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GGGACCCCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATTTCACAAACTCAGGCTaGTTGGAGATGAGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GTPTLRGTCLRPMTSMVDFTNSG*LEMSAA
Trigger: AGCTGCACTCATCTCCAACAAGCCTGAGTTTGTGAA...ATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTGGGTACAGCGTGTGGTaGGGTCCGAAGCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPGYSVW*GPKQLR
Trigger: CCTCAGCTGCTTCGGACCCAACCACACGCTGTACCC...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS GCA 90 bp GTTACTGGAGCCTTCTCGGACCCGCGTGATTCCACCACCGTGAGATaGAGGAACTGTCTAGATTTGCAGACAGAGCTTGTCCTTGACCCC +
Preference number: 5 (lower is better)
Translates to: VTGAFSDPRDSTTVR*RNCLDLQTELVLDP
Trigger: GGGGTCAAGGACAAGCTCTGTCTGCAAATCTAGACAGTTCCTGCATCTCACGGTGGTGGAATCACGCGGGTCCGAGAAGGCTCCAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS-3UTR CAA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCATCTTGCTTGTCATTGTaGCCGAAGGGGCACTGTAGC +
Preference number: 5 (lower is better)
Translates to: EFILTVRSSDSAPSPGQASCLSL*PKGHCS
Trigger: GCTACAGTGCCCCTTCGGCAACAATGACAAGCAAGA...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCACTGAGGCTTTCTTGCTaGTCATTGTTGCCGAAGGGG +
Preference number: 5 (lower is better)
Translates to: EFILTVRSSDSAPSPGQALRLSC*SLLPKG
Trigger: CCCCTTCGGCAACAATGACAAGCAAGAAAGCCTCAG...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCCGTTGGTGGTGGCGTaGTCGATGGTGTGCAACGTG +
Preference number: 5 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPPLVVA*SMVCNV
Trigger: CACGTTGCACACCATCGACAACGCCACCACCAACGG...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAGGGCCCTCATGGTTCACGCTCCTGTGAGCTGTTGACACCAAACCAGAAGGCCCCTCCGGACGATATCTaGGATCTTTTTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: EGPHGSRSCELLTPNQKAPPDDI*DLFGPL
Trigger: GAGTGGACCAAAAAGATCCAAGATATCGTCCGGAGG...GGCCTTCTGGTTTGGTGTCAACAGCTCACAGGAGCGTGAACCATGAGGGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGTTCACAAACTCAGGCTaGTTGGAGATGAGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELFTNSG*LEMSAA
Trigger: AGCTGCACTCATCTCCAACAAGCCTGAGTTTGTGAA...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTAGCTGCTTGTGCCTCTaGGCCGGAGTCTTCAGGACC +
Preference number: 5 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPSCLCL*AGVFRT
Trigger: GGTCCTGAAGACTCCGGCCAAGAGGCACAAGCAGCT...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp TGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGTCGTTCTTCTCCAGCTaGTTCTTGAGCTGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: WVLPRSPPEGPHGSRSCESFFSS*FLSCLC
Trigger: GCACAAGCAGCTCAAGAACAAGCTGGAGAAGAACGA...CTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCTCGGGCCGCTGCTTTaGCTGGAACTGTCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPLGPLL*LELSVL
Trigger: CAGAACCGACAGTTCCAGCAAAAGCAGCGGCCCGAG...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GACATCCACAGGCTGCAGGAAGCTCACCGGGGGATCGAGGAGAACTTCAGGCAGATGGCGTCAACCTTATaGCTGATGTCCTCGATCTTC +
Preference number: 5 (lower is better)
Translates to: DIHRLQEAHRGIEENFRQMASTL*LMSSIF
Trigger: GAAGATCGAGGACATCAGCAATAAGGTTGACGCCAT...CTGCCTGAAGTTCTCCTCGATCCCCCGGTGAGCTTCCTGCAGCCTGTGGATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CCGACTCTCCGGGGAACTTGCCTCAGGCCAATGACCTCCATGGTGGATGAGCTGGGCAGATTTAATGTCTaGGGTTTTACCACGTTCCCC +
Preference number: 5 (lower is better)
Translates to: PTLRGTCLRPMTSMVDELGRFNV*GFTTFP
Trigger: GGGGAACGTGGTAAAACCCAAGACATTAAATCTGCC...CAGCTCATCCACCATGGAGGTCATTGGCCTGAGGCAAGTTCCCCGGAGAGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CAA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCAGGAACTGTCTAGATTaGCAGACAGAGCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: PSPGQARLHVEAPRNMEARNCLD*QTELVL
Trigger: AAGGACAAGCTCTGTCTGCAAATCTAGACAGTTCCT...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS TCA 90 bp CCCCGTTCTCCAGGAAGAGCTTCACAAACTCAGGCTTGTTGGAGATaGGTGCAGCTGTCATCGTGGGGTGCAGATCTGAAGGCTTCCACT +
Preference number: 5 (lower is better)
Translates to: PRSPGRASQTQACWR*VQLSSWGADLKAST
Trigger: AGTGGAAGCCTTCAGATCTGCACCCCACGATGACAGCTGCACTCATCTCCAACAAGCCTGAGTTTGTGAAGCTCTTCCTGGAGAACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS TCA 90 bp TTGCAAACATGCGAGGGTGGTTACTGGAGCCTTCTCGGACCCGCGTaGTTCCACCACCGTGAGATGCAGGAACTGTCTAGATTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: LQTCEGGYWSLLGPA*FHHREMQELSRFAD
Trigger: GTCTGCAAATCTAGACAGTTCCTGCATCTCACGGTGGTGGAATCACGCGGGTCCGAGAAGGCTCCAGTAACCACCCTCGCATGTTTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS GCA 90 bp TGCGCCGACGTCCAGCTTATTCCAGAAGTCACTGAAGTACAAGGCTaGCTTCTTCATCAGCCCGCACTCGTCAGGGTCATAGAAGAGCTG +
Preference number: 5 (lower is better)
Translates to: CADVQLIPEVTEVQG*LLHQPALVRVIEEL
Trigger: CAGCTCTTCTATGACCCTGACGAGTGCGGGCTGATGAAGAAGGCAGCCTTGTACTTCAGTGACTTCTGGAATAAGCTGGACGTCGGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS-3UTR CAA 90 bp GAACTTCAGGCAGCCGTCACACAGCCCCTGGCCCTGGACGTGTCAGGAACTTTACGAACTGAGGCTTTCTaGCTTGTCATTGTTGCCGAA +
Preference number: 5 (lower is better)
Translates to: ELQAAVTQPLALDVSGTLRTEAF*LVIVAE
Trigger: TTCGGCAACAATGACAAGCAAGAAAGCCTCAGTTCG...TAAAGTTCCTGACACGTCCAGGGCCAGGGGCTGTGTGACGGCTGCCTGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp CCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCAGCATCAGACAGTTaGGAACTTTCCACAAAATAC +
Preference number: 5 (lower is better)
Translates to: PSPGQARLHVEAPRNMEAPASDS*ELSTKY
Trigger: GTATTTTGTGGAAAGTTCCAAACTGTCTGATGCTGG...GGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp CTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGCACCTCGAAACATGGAGGCCCCCAGCATCAGACAGTTaGGAACTTTCCACAAAATAC +
Preference number: 5 (lower is better)
Translates to: LAQARQGSMLRHLETWRPPASDS*ELSTKY
Trigger: GTATTTTGTGGAAAGTTCCAAACTGTCTGATGCTGG...GGGCCTCCATGTTTCGAGGTGCCTCAACATGGAGCCTTGCCTGGCCTGGGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCATTCACAATGATGATCTaGGGCCCCAGCGTCTTACTG +
Preference number: 5 (lower is better)
Translates to: EFILTVRSSDSAPSPGQAFTMMI*GPSVLL
Trigger: CAGTAAGACGCTGGGGCCCAAGATCATCATTGTGAA...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GGGCTCCTGTACCCCCACGGAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCTCGTTCTTCTCCAGCTaGTTCTTGAGCTGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: GLLYPHGVYPDSQEFRQCSFFSS*FLSCLC
Trigger: GCACAAGCAGCTCAAGAACAAGCTGGAGAAGAACGA...GCACTGTCTGAACTCCTGACTGTCAGGATAAACTCCGTGGGGGTACAGGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS GCA 90 bp TCCGTGAAGGTCTCAAACATCTCCTGGAAGAACACGCTCAGTTTCTaGTGGATCAGGGAGATAGTGATGTCCGAGACAGGCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SVKVSNISWKNTLSF*WIREIVMSETGRLA
Trigger: GGCCAACCTGCCTGTCTCGGACATCACTATCTCCCTGATCCAGCAGAAACTGAGCGTGTTCTTCCAGGAGATGTTTGAGACCTTCACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS-3UTR CAA 90 bp GGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTTCACGCTCCTGTGAGCCCAGCATCAGACAGTTaGGAACTTTCCACAAAATAC +
Preference number: 5 (lower is better)
Translates to: GFYHVPLLRALMVHAPVSPASDS*ELSTKY
Trigger: GTATTTTGTGGAAAGTTCCAAACTGTCTGATGCTGG...GCTCACAGGAGCGTGAACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCCTGGACATGTTTCTTaGGGTCCCACTGTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPPGHVS*GPTVCP
Trigger: AGGGCACACAGTGGGACCCAAAGAAACATGTCCAGG...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTGCAGGTCAGGTTCCCTaGGCCATCCTCATCCAGTAT +
Preference number: 5 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGAGQVP*AILIQY
Trigger: ATACTGGATGAGGATGGCCAAGGGAACCTGACCTGC...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCACACGATGGGGATCTaGATGGCCACACCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPHTMGI*MATPPL
Trigger: AAGAGGAGGTGTGGCCATCAAGATCCCCATCGTGTG...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp TCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCAAGGCTCCATGTTGAGGATATCTTGGATCTTTTaGGTCCACTCGACAATCCTG +
Preference number: 5 (lower is better)
Translates to: SGVQTVPLAQARQGSMLRISWIF*VHSTIL
Trigger: CAGGATTGTCGAGTGGACCAAAAAGATCCAAGATAT...CCTCAACATGGAGCCTTGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397932.6
CDS-3UTR CAA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGCCACGAAGAGCAAGATaGCGCCGACGTCCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: RPEMADLMSWVLPRSPPEPRRAR*RRRPAY
Trigger: ATAAGCTGGACGTCGGCGCAATCTTGCTCTTCGTGG...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp GAGTTTATCCTGACAGTCAGGAGTTCAGACAGTGCCCCTAGCCCAGGCCAGGCATGTCAGGAACTTTATTaGTGGAAAGCACAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: EFILTVRSSDSAPSPGQACQELY*WKAQKS
Trigger: GCTCTTCTGTGCTTTCCACAAATAAAGTTCCTGACA...TGCCTGGCCTGGGCTAGGGGCACTGTCTGAACTCCTGACTGTCAGGATAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS CCA 90 bp GTCCACTCGACAATCCTGCTTTCCGTGAAGGTCTCAAACATCTCCTaGAAGAACACGCTCAGTTTCTGCTGGATCAGGGAGATAGTGATG +
Preference number: 5 (lower is better)
Translates to: VHSTILLSVKVSNIS*KNTLSFCWIREIVM
Trigger: CATCACTATCTCCCTGATCCAGCAGAAACTGAGCGTGTTCTTCCAGGAGATGTTTGAGACCTTCACGGAAAGCAGGATTGTCGAGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS-3UTR CAA 90 bp GAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTGGCAGATTTAATGTCTaGGGTTTTACCACGTTCCCC +
Preference number: 5 (lower is better)
Translates to: EMADLMSWVLPRSPPEGPGRFNV*GFTTFP
Trigger: GGGGAACGTGGTAAAACCCAAGACATTAAATCTGCC...AGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000621064.1
CDS-3UTR CAA 90 bp GCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGGGCCCTCATGGTATATCTTGGATCTTTTaGGTCCACTCGACAATCCTG +
Preference number: 5 (lower is better)
Translates to: ADLMSWVLPRSPPEGPHGISWIF*VHSTIL
Trigger: CAGGATTGTCGAGTGGACCAAAAAGATCCAAGATAT...ACCATGAGGGCCCTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS-3UTR CAA 90 bp AGGCCTGAGATGGCAGATTTAATGTCTTGGGTTTTACCACGTTCCCCTCCTGAGTGTCAGGAACTTTATTaGTGGAAAGCACAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RPEMADLMSWVLPRSPPECQELY*WKAQKS
Trigger: GCTCTTCTGTGCTTTCCACAAATAAAGTTCCTGACA...CTCAGGAGGGGAACGTGGTAAAACCCAAGACATTAAATCTGCCATCTCAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300481.13
ENST00000300482.9
CDS CCA 72 bp GGCTGCGTGAAGTCCCCCAGCAGCTCCCGCAGCACCTaGGCCACGTGGTGCATCTGCAGGCGGGGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: GCVKSPSSSRST*ATWCICRRGAA
Trigger: CGCGGCGCCCCGCCTGCAGATGCACCACGTGGCCCAGGTGCTGCGGGAGCTGCTGGGGGACTTCACGCAGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 90 bp TCGGCCACGCGGCCCGAGCCCTCCACAACCACACAGGGGGTGCCGTaGGTGGTGGCGTTGTCGATGGTGTGCAACGTGCCCGGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: SATRPEPSTTTQGVP*VVALSMVCNVPGPP
Trigger: GGGCGGCCCGGGCACGTTGCACACCATCGACAACGCCACCACCAACGGCACCCCCTGTGTGGTTGTGGAGGGCTCGGGCCGCGTGGCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp CCTGTGCGGCCCATGGGGTTCAGGGGCAACCCGGCCTaGACTGTGTACGGCCCGTGGAAGCTCCGGCGGTCC +
Preference number: 6 (lower is better)
Translates to: PVRPMGFRGNPA*TVYGPWKLRRS
Trigger: GGACCGCCGGAGCTTCCACGGGCCGTACACAGTGCAGGCCGGGTTGCCCCTGAACCCCATGGGCCGCACAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp CGTGGTAGCTGTCGCCCGGCTCCTCCGTCTTCTTCCTaGCTCCCGGCTCAGCATCCGGCTCCTCCGCGGCCT +
Preference number: 6 (lower is better)
Translates to: RGSCRPAPPSSS*LPAQHPAPPRP
Trigger: AGGCCGCGGAGGAGCCGGATGCTGAGCCGGGAGGCAGGAAGAAGACGGAGGAGCCGGGCGACAGCTACCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
CDS CCA 72 bp TTCAGGGGCAACCCGGCCTGCACTGTGTACGGCCCGTaGAAGCTCCGGCGGTCCCTCAGGCCATCCACCACG +
Preference number: 6 (lower is better)
Translates to: FRGNPACTVYGP*KLRRSLRPSTT
Trigger: CGTGGTGGATGGCCTGAGGGACCGCCGGAGCTTCCACGGGCCGTACACAGTGCAGGCCGGGTTGCCCCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 90 bp TCCTCGTTCCGCCTCCACCGCGTGACCATGGGGTACAGCGTGTGGTaGGGTCCGAAGCAGCTGAGGCTCCCGCGCCCACGCAGTCCTGTG +
Preference number: 6 (lower is better)
Translates to: SSFRLHRVTMGYSVW*GPKQLRLPRPRSPV
Trigger: CACAGGACTGCGTGGGCGCGGGAGCCTCAGCTGCTTCGGACCCAACCACACGCTGTACCCCATGGTCACGCGGTGGAGGCGGAACGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS GCA 72 bp CCACGCGGCCCGAGCCCTCCACAACCACACAGGGGGTaGCGTTGGTGGTGGCGTTGTCGATGGTGTGCAACG +
Preference number: 6 (lower is better)
Translates to: PRGPSPPQPHRG*RWWWRCRWCAT
Trigger: CGTTGCACACCATCGACAACGCCACCACCAACGGCACCCCCTGTGTGGTTGTGGAGGGCTCGGGCCGCGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp AGGAGGACCGTCAGCCACTCAGGGAAGGCCGGCCTCTaGTGCGTCGCGTCGCTCTCGGGGCACTTAGGCTTG +
Preference number: 6 (lower is better)
Translates to: RRTVSHSGKAGL*CVASLSGHLGL
Trigger: CAAGCCTAAGTGCCCCGAGAGCGACGCGACGCAGCAGAGGCCGGCCTTCCCTGAGTGGCTGACGGTCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp ACGTGGTACTGTCGCCCGGCTCCTCCGTCTTCTTCCTaGTCCCGGCTCAGCATCCGGCTCCTCCGCGGCCTT +
Preference number: 6 (lower is better)
Translates to: TWYCRPAPPSSS*SRLSIRLLRGL
Trigger: AAGGCCGCGGAGGAGCCGGATGCTGAGCCGGGAGCAGGAAGAAGACGGAGGAGCCGGGCGACAGTACCACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621064.1
CDS CCA 72 bp AAGCTGCCCGTGGGATGGATCAGGCCCTCGCGGCGGTaGACAGTGCCCCAGGTGGCGACTCCGATGGTGATG +
Preference number: 6 (lower is better)
Translates to: KLPVGWIRPSRR*TVPQVATPMVM
Trigger: CATCACCATCGGAGTCGCCACCTGGGGCACTGTCCACCGCCGCGAGGGCCTGATCCATCCCACGGGCAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 72 bp AGCCCTCCACAACCACACAGGGGGTGCCGTTGGTGGTaGCGTTGTCGATGGTGTGCAACGTGCCCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: SPPQPHRGCRWW*RCRWCATCPGR
Trigger: GCGGCCCGGGCACGTTGCACACCATCGACAACGCCACCACCAACGGCACCCCCTGTGTGGTTGTGGAGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 72 bp CCGAGCCCTCCACAACCACACAGGGGGTGCCGTTGGTaGTGGCGTTGTCGATGGTGTGCAACGTGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: PSPPQPHRGCRW*WRCRWCATCPG
Trigger: GCCCGGGCACGTTGCACACCATCGACAACGCCACCACCAACGGCACCCCCTGTGTGGTTGTGGAGGGCTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 72 bp GGCCCGAGCCCTCCACAACCACACAGGGGGTGCCGTTaGTGGTGGCGTTGTCGATGGTGTGCAACGTGCCCG +
Preference number: 6 (lower is better)
Translates to: GPSPPQPHRGCR*WWRCRWCATCP
Trigger: CGGGCACGTTGCACACCATCGACAACGCCACCACCAACGGCACCCCCTGTGTGGTTGTGGAGGGCTCGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 72 bp GACCGGAGGCTCACTCCCTGCACGTTGAGCTTGACGTaGGGAACGGGCAGCAGGAGCCGCAGCCGGTCGTTG +
Preference number: 6 (lower is better)
Translates to: DRRLTPCTLSLT*GTGSRSRSRSL
Trigger: CAACGACCGGCTGCGGCTCCTGCTGCCCGTTCCCCACGTCAAGCTCAACGTGCAGGGAGTGAGCCTCCGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 72 bp CTGTGCGGCCCATGGGGTTCTCTCCCATGGGGTCCATaGCGGCCGCGTCCTTCCTCTCTCCCAGGGCACCTT +
Preference number: 6 (lower is better)
Translates to: LCGPWGSLPWGP*RPRPSSLPGHL
Trigger: AAGGTGCCCTGGGAGAGAGGAAGGACGCGGCCGCCATGGACCCCATGGGAGAGAACCCCATGGGCCGCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490982.1
CDS CAA 72 bp CGGCCCGAGCCCTCCACAACCACACAGGGGGTGCCGTaGGTGGTGGCGTTGTCGATGGTGTGCAACGTGCCC +
Preference number: 6 (lower is better)
Translates to: RPEPSTTTQGVP*VVALSMVCNVP
Trigger: GGGCACGTTGCACACCATCGACAACGCCACCACCAACGGCACCCCCTGTGTGGTTGTGGAGGGCTCGGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 72 bp ACGGCCCCTCGGAACAGCCAGTCCACCCGGCGCTCGTaGTGGATGAGGATGGCCTGCTTGGCCACCCCGAAG +
Preference number: 6 (lower is better)
Translates to: TAPRNSQSTRRS*WMRMACLATPK
Trigger: CTTCGGGGTGGCCAAGCAGGCCATCCTCATCCACAACGAGCGCCGGGTGGACTGGCTGTTCCGAGGGGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp GTGACCCTTCTGGGCAGCCCCTCAAAGCCCTCCTCCTaGTCCGAGCCAGCTTTCCTCAGGGCTGAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: VTLLGSPSKPSS*SEPAFLRAEGS
Trigger: GGAGCCCTCAGCCCTGAGGAAAGCTGGCTCGGAGCAGGAGGAGGGCTTTGAGGGGCTGCCCAGAAGGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS GCA 72 bp CAGTCCACCCGGCGCTCGTTGTGGATGAGGATGGCCTaGTTGGCCACCCCGAAGGACACCACCCACACAGCC +
Preference number: 6 (lower is better)
Translates to: QSTRRSLWMRMA*LATPKDTTHTA
Trigger: GGCTGTGTGGGTGGTGTCCTTCGGGGTGGCCAAGCAGGCCATCCTCATCCACAACGAGCGCCGGGTGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp CAAGCCGGGCGCTCGGGATCCTCCACCAGCACCTTCTaGAGCTTGCTGTGGAACAGGCAGGAGGGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: QAGRSGSSTSTF*SLLWNRQEGSR
Trigger: CCTGGACCCCTCCTGCCTGTTCCACAGCAAGCTGCAGAAGGTGCTGGTGGAGGATCCCGAGCGCCCGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 72 bp GAGATAGTGATGTCCGAGACAGGCAGGTTGGCCACCTaGGCAATGACGTCGGCCACGCGGCCCGAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: EIVMSETGRLAT*AMTSATRPEPS
Trigger: GGAGGGCTCGGGCCGCGTGGCCGACGTCATTGCCCAGGTGGCCAACCTGCCTGTCTCGGACATCACTATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 72 bp TCCACCCGGCGCTCGTTGTGGATGAGGATGGCCTGCTaGGCCACCCCGAAGGACACCACCCACACAGCCAGC +
Preference number: 6 (lower is better)
Translates to: STRRSLWMRMAC*ATPKDTTHTAS
Trigger: GCTGGCTGTGTGGGTGGTGTCCTTCGGGGTGGCCAAGCAGGCCATCCTCATCCACAACGAGCGCCGGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS TCA 72 bp GGCAGGTGGTCTTCCCCCAGGCCTCGGACACGCGGGTaGGCAGTTTCTGGGCTCTCTCTTCGTCCTTCCGGT +
Preference number: 6 (lower is better)
Translates to: GRWSSPRPRTRG*AVSGLSLRPSG
Trigger: ACCGGAAGGACGAAGAGAGAGCCCAGAAACTGCTCACCCGCGTGTCCGAGGCCTGGGGGAAGACCACCTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 90 bp AACAGCCAGTCCACCCGGCGCTCGTTGTGGATGAGGATGGCCTGCTaGGCCACCCCGAAGGACACCACCCACACAGCCAGCAGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: NSQSTRRSLWMRMAC*ATPKDTTHTASRKR
Trigger: CCTCTTCCTGCTGGCTGTGTGGGTGGTGTCCTTCGGGGTGGCCAAGCAGGCCATCCTCATCCACAACGAGCGCCGGGTGGACTGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS TCA 72 bp AGAGATTGGGGACGTCCAGCCCCCAGTGCTGGGTCATaGGGTGGTAGATCACGCTGGAGGGCGTGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: RDWGRPAPSAGS*GGRSRWRACPG
Trigger: CCCAGGACACGCCCTCCAGCGTGATCTACCACCTCATGACCCAGCACTGGGGGCTGGACGTCCCCAATCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
CDS TCA 72 bp CACCGTCGATGTAGCCCGGGATCTGCCCGAAGATGGTaGGGTAGGAGTGGTAGACGGCCCCTCGGAACAGCC +
Preference number: 6 (lower is better)
Translates to: HRRCSPGSARRW*GRSGRRPLGTA
Trigger: GGCTGTTCCGAGGGGCCGTCTACCACTCCTACCTCACCATCTTCGGGCAGATCCCGGGCTACATCGACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp GACACAAACTTCATGTCCTTGGCCTCCAGGGCGAGCTaGAGGCAGGTGGTCTTCCCCCAGGCCTCGGACACG +
Preference number: 6 (lower is better)
Translates to: DTNFMSLASRAS*RQVVFPQASDT
Trigger: CGTGTCCGAGGCCTGGGGGAAGACCACCTGCCTGCAGCTCGCCCTGGAGGCCAAGGACATGAAGTTTGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 72 bp TGGATCAGGGAGATAGTGATGTCCGAGACAGGCAGGTaGGCCACCTGGGCAATGACGTCGGCCACGCGGCCC +
Preference number: 6 (lower is better)
Translates to: WIREIVMSETGR*ATWAMTSATRP
Trigger: GGGCCGCGTGGCCGACGTCATTGCCCAGGTGGCCAACCTGCCTGTCTCGGACATCACTATCTCCCTGATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 90 bp AGTTTCTGCTGGATCAGGGAGATAGTGATGTCCGAGACAGGCAGGTaGGCCACCTGGGCAATGACGTCGGCCACGCGGCCCGAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: SFCWIREIVMSETGR*ATWAMTSATRPEPS
Trigger: GGAGGGCTCGGGCCGCGTGGCCGACGTCATTGCCCAGGTGGCCAACCTGCCTGTCTCGGACATCACTATCTCCCTGATCCAGCAGAAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp TCTGGAGGAGGGTCTTGTGGTTCGCATAGAGTGGGATaGGCCTGTCCACCACCTGCCATCGGATGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: SGGGSCGSHRVG*ACPPPAIGWRP
Trigger: GGGCCTCCATCCGATGGCAGGTGGTGGACAGGCGCATCCCACTCTATGCGAACCACAAGACCCTCCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS CAA 90 bp TGTAGCCTCCAGCTCTTGAAGAGGCTGCTGTTGCTGCGCCGGAGATaGGAGACCATCCCCAGGTCAGTGACCCTTCTGGGCAGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: CSLQLLKRLLLLRRR*ETIPRSVTLLGSPS
Trigger: TGAGGGGCTGCCCAGAAGGGTCACTGACCTGGGGATGGTCTCCAATCTCCGGCGCAGCAACAGCAGCCTCTTCAAGAGCTGGAGGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS TCA 72 bp GTCACGGATGGGGTCCATGGTGAAGGTCACATGGCCTaGGGAACGCTTGTAGAGGGACCGGAGGCTCACTCC +
Preference number: 6 (lower is better)
Translates to: VTDGVHGEGHMA*GTLVEGPEAHS
Trigger: GGAGTGAGCCTCCGGTCCCTCTACAAGCGTTCCTCAGGCCATGTGACCTTCACCATGGACCCCATCCGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 72 bp CAGCTCTTGAAGAGGCTGCTGTTGCTGCGCCGGAGATaGGAGACCATCCCCAGGTCAGTGACCCTTCTGGGC +
Preference number: 6 (lower is better)
Translates to: QLLKRLLLLRRR*ETIPRSVTLLG
Trigger: GCCCAGAAGGGTCACTGACCTGGGGATGGTCTCCAATCTCCGGCGCAGCAACAGCAGCCTCTTCAAGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS CAA 72 bp GGGCACTGTAGCCTCCAGCTCTTGAAGAGGCTGCTGTaGCTGCGCCGGAGATTGGAGACCATCCCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: GHCSLQLLKRLL*LRRRLETIPRS
Trigger: TGACCTGGGGATGGTCTCCAATCTCCGGCGCAGCAACAGCAGCCTCTTCAAGAGCTGGAGGCTACAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS CAA 90 bp TTGCCGAAGGGGCACTGTAGCCTCCAGCTCTTGAAGAGGCTGCTGTaGCTGCGCCGGAGATTGGAGACCATCCCCAGGTCAGTGACCCTT +
Preference number: 6 (lower is better)
Translates to: LPKGHCSLQLLKRLL*LRRRLETIPRSVTL
Trigger: AAGGGTCACTGACCTGGGGATGGTCTCCAATCTCCGGCGCAGCAACAGCAGCCTCTTCAAGAGCTGGAGGCTACAGTGCCCCTTCGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS TCA 72 bp AGCAAGGCCTGCAAGATGGCCACATCCACGTCCTGCTaGCCATCCTTGCCTTCCCGGAAGACAGTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SKACKMATSTSC*PSLPSRKTVSS
Trigger: GCTGCTGACTGTCTTCCGGGAAGGCAAGGATGGTCAGCAGGACGTGGATGTGGCCATCTTGCAGGCCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp AGGGCACAGTCAGTAGTGAGCCCCGAACTCAGCGGCTaGCTTCTGGAGGAGGGTCTTGTGGTTCGCATAGAG +
Preference number: 6 (lower is better)
Translates to: RAQSVVSPELSG*LLEEGLVVRIE
Trigger: CTCTATGCGAACCACAAGACCCTCCTCCAGAAGGCAGCCGCTGAGTTCGGGGCTCACTACTGACTGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS CCA 72 bp GCCACTGCCAGTTTCAGCTGGTGGTCCCAGTTCTCGTaGCCAAAGTGGTCTTGGCTCCGTGAGGCTTTCAGC +
Preference number: 6 (lower is better)
Translates to: ATASFSWWSQFS*PKWSWLREAFS
Trigger: GCTGAAAGCCTCACGGAGCCAAGACCACTTTGGCCACGAGAACTGGGACCACCAGCTGAAACTGGCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 72 bp TCTCCTCGCACACCAAGGAGAAGAGCCAGAGGTAGATaGCACACTCGCACCAGGAGGGCACAGGCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: SPRTPRRRARGR*HTRTRRAQAGS
Trigger: ACTTCCAGCCTGTGCCCTCCTGGTGCGAGTGTGCCATCTACCTCTGGCTCTTCTCCTTGGTGTGCGAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 72 bp TGCCTTCTGGAGGAGGGTCTTGTGGTTCGCATAGAGTaGGATGCGCCTGTCCACCACCTGCCATCGGATGGA +
Preference number: 6 (lower is better)
Translates to: CLLEEGLVVRIE*DAPVHHLPSDG
Trigger: TCCATCCGATGGCAGGTGGTGGACAGGCGCATCCCACTCTATGCGAACCACAAGACCCTCCTCCAGAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS CCA 72 bp TGCCCTCAGGACAGTCCTCTCTCCAGCTCGCTACACTaGGGTTCTAGAGACACATGGGGTGGTTGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: CPQDSPLSSSLH*GSRDTWGGCCS
Trigger: CGAGCAGCAACCACCCCATGTGTCTCTAGAACCCCAGTGTAGCGAGCTGGAGAGAGGACTGTCCTGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300482.9
CDS CAA 90 bp TCTTGCTTGTCATTGTTGCCGAAGGGGCACTGTAGCCTCCAGCTCTaGAAGAGGCTGCTGTTGCTGCGCCGGAGATTGGAGACCATCCCC +
Preference number: 6 (lower is better)
Translates to: SCLSLLPKGHCSLQL*KRLLLLRRRLETIP
Trigger: GGGGATGGTCTCCAATCTCCGGCGCAGCAACAGCAGCCTCTTCAAGAGCTGGAGGCTACAGTGCCCCTTCGGCAACAATGACAAGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS CAA 90 bp GACCCGCGTGATTCCACCACCGTGAGATGCAGGAACTGTCTAGATTaGCAGACAGAGCTTGTCCTTGACCCCCAAAGCTCCAGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: DPRDSTTVRCRNCLD*QTELVLDPQSSSPA
Trigger: GGCAGGGCTGGAGCTTTGGGGGTCAAGGACAAGCTCTGTCTGCAAATCTAGACAGTTCCTGCATCTCACGGTGGTGGAATCACGCGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS TCA 72 bp CATTGTTGCCGAAGGGGCACTGTAGCCTCCAGCTCTTaGAGAGGCTGCTGTTGCTGCGCCGGAGATTGGAGA +
Preference number: 6 (lower is better)
Translates to: HCCRRGTVASSS*RGCCCCAGDWR
Trigger: TCTCCAATCTCCGGCGCAGCAACAGCAGCCTCTTCAAGAGCTGGAGGCTACAGTGCCCCTTCGGCAACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS TCA 72 bp TGCGAGGGTGGTTACTGGAGCCTTCTCGGACCCGCGTaGTTCCACCACCGTGAGATGCAGGAACTGTCTAGA +
Preference number: 6 (lower is better)
Translates to: CEGGYWSLLGPA*FHHREMQELSR
Trigger: TCTAGACAGTTCCTGCATCTCACGGTGGTGGAATCACGCGGGTCCGAGAAGGCTCCAGTAACCACCCTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS GCA 72 bp TGCGATGCAGTCCTGGCTCTGAGCCCAGATGATTCCTaGCAGCTCCCGACGGTTCTGGACAATGGCCCAAAT +
Preference number: 6 (lower is better)
Translates to: CDAVLALSPDDS*QLPTVLDNGPN
Trigger: ATTTGGGCCATTGTCCAGAACCGTCGGGAGCTGGCAGGAATCATCTGGGCTCAGAGCCAGGACTGCATCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp CCACCAGCACTTCCAGCATCTTCTTTATGCTCTTCCTaGAGATGGCTCCATCCTCGTTCCGCCTCCACCGCG +
Preference number: 6 (lower is better)
Translates to: PPALPASSLCSS*RWLHPRSASTA
Trigger: CGCGGTGGAGGCGGAACGAGGATGGAGCCATCTGCAGGAAGAGCATAAAGAAGATGCTGGAAGTGCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS CCA 72 bp TCCTGGACATGTTTCTTTGGGTCCCACTGTGTGCCCTaGAAGGTGTGGGGCTTGGTAGCCTCCTCCAAGTGC +
Preference number: 6 (lower is better)
Translates to: SWTCFFGSHCVP*KVWGLVASSKC
Trigger: GCACTTGGAGGAGGCTACCAAGCCCCACACCTTCCAGGGCACACAGTGGGACCCAAAGAAACATGTCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS CCA 72 bp AGTTTCAGCTGGTGGTCCCAGTTCTCGTGGCCAAAGTaGTCTTGGCTCCGTGAGGCTTTCAGCAAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: SFSWWSQFSWPK*SWLREAFSKAC
Trigger: GCAGGCCTTGCTGAAAGCCTCACGGAGCCAAGACCACTTTGGCCACGAGAACTGGGACCACCAGCTGAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 72 bp TCCACGCGATTCCATGCCACTGCCAGTTTCAGCTGGTaGTCCCAGTTCTCGTGGCCAAAGTGGTCTTGGCTC +
Preference number: 6 (lower is better)
Translates to: STRFHATASFSW*SQFSWPKWSWL
Trigger: GAGCCAAGACCACTTTGGCCACGAGAACTGGGACCACCAGCTGAAACTGGCAGTGGCATGGAATCGCGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS TCA 72 bp CCAGGTTCTCGTACAGGTAGAGCAAGGTGTCCCAGGTaGCAAACTCCTTCAGCTGCACCCCGTTCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: PGSRTGRARCPR*QTPSAAPRSPG
Trigger: TCCTGGAGAACGGGGTGCAGCTGAAGGAGTTTGTCACCTGGGACACCTTGCTCTACCTGTACGAGAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp GAGCCTGCAGGTCAGCCCTGCCACGAAGAGCAAGATTaGGCCGACGTCCAGCTTATTCCAGAAGTCACTGAA +
Preference number: 6 (lower is better)
Translates to: EPAGQPCHEEQD*ADVQLIPEVTE
Trigger: TTCAGTGACTTCTGGAATAAGCTGGACGTCGGCGCAATCTTGCTCTTCGTGGCAGGGCTGACCTGCAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp ATGCCGCACTTCAGCAAGTTTTCAAAAGACGGCCAGTaGTCCTGCCGGAGGATCCGCTTCAGCTTCCGAGGT +
Preference number: 6 (lower is better)
Translates to: MPHFSKFSKDGQ*SCRRIRFSFRG
Trigger: ACCTCGGAAGCTGAAGCGGATCCTCCGGCAGGAGCACTGGCCGTCTTTTGAAAACTTGCTGAAGTGCGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS GCA 72 bp TCCAGCCCTGCCTTATTGCTGATGTCCTCGATCTTCTaGTCGGGCCGCTGCTTTTGCTGGAACTGTCGGTTC +
Preference number: 6 (lower is better)
Translates to: SSPALLLMSSIF*SGRCFCWNCRF
Trigger: GAACCGACAGTTCCAGCAAAAGCAGCGGCCCGAGCAGAAGATCGAGGACATCAGCAATAAGGCAGGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS CCA 72 bp TGCCCTCAGGACAGTCCTCTCTCCAGCTCGCTACACTaGGGTTCTAGAGACACATGGGGTGGTTGCTTCACA +
Preference number: 6 (lower is better)
Translates to: CPQDSPLSSSLH*GSRDTWGGCFT
Trigger: TGTGAAGCAACCACCCCATGTGTCTCTAGAACCCCAGTGTAGCGAGCTGGAGAGAGGACTGTCCTGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431901.5
CDS CAA 72 bp CAAAGGCATCGGTTGGCATCTCCTGGACATGTTTCTTaGGGTCCCACTGTGTGCCCTGGAAGGTGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: QRHRLASPGHVS*GPTVCPGRCGA
Trigger: AGCCCCACACCTTCCAGGGCACACAGTGGGACCCAAAGAAACATGTCCAGGAGATGCCAACCGATGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS CAA 90 bp AGCTGCACCCCGTTCTCCAGGAAGAGCTTCACAAACTCAGGCTTGTaGGAGATGAGTGCAGCTGTCATCGTGGGGTGCAGATCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: SCTPFSRKSFTNSGL*EMSAAVIVGCRSEG
Trigger: GCCTTCAGATCTGCACCCCACGATGACAGCTGCACTCATCTCCAACAAGCCTGAGTTTGTGAAGCTCTTCCTGGAGAACGGGGTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS TCA 72 bp CTCGGACGTACTTTTTCACCTTCTGGCTCAGGCCCGTaGAGACGATGTCGCCAAAGGCATCGGTTGGCATCT +
Preference number: 6 (lower is better)
Translates to: LGRTFSPSGSGP*RRCRQRHRLAS
Trigger: AGATGCCAACCGATGCCTTTGGCGACATCGTCTTCACGGGCCTGAGCCAGAAGGTGAAAAAGTACGTCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
CDS GCA 72 bp GGCTTGTTGGAGATGAGTGCAGCTGTCATCGTGGGGTaGAGATCTGAAGGCTTCCACTGCCACTCATCCATG +
Preference number: 6 (lower is better)
Translates to: GLLEMSAAVIVG*RSEGFHCHSSM
Trigger: CATGGATGAGTGGCAGTGGAAGCCTTCAGATCTGCACCCCACGATGACAGCTGCACTCATCTCCAACAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp CACTTCAGCAAGTTTTCAAAAGACGGCCAGTGCTCCTaGCGGAGGATCCGCTTCAGCTTCCGAGGTAGCATC +
Preference number: 6 (lower is better)
Translates to: HFSKFSKDGQCS*RRIRFSFRGSI
Trigger: GATGCTACCTCGGAAGCTGAAGCGGATCCTCCGGCAGGAGCACTGGCCGTCTTTTGAAAACTTGCTGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000490982.1
ENST00000498430.5
ENST00000621064.1
CDS GCA 72 bp GCCTTCTCGGACCCGCGTGATTCCACCACCGTGAGATaGAGGAACTGTCTAGATTTGCAGACAGAGCTTGTC +
Preference number: 6 (lower is better)
Translates to: AFSDPRDSTTVR*RNCLDLQTELV
Trigger: GACAAGCTCTGTCTGCAAATCTAGACAGTTCCTGCATCTCACGGTGGTGGAATCACGCGGGTCCGAGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS GCA 72 bp ATGGCGTCAACCCTGCCATGTTTTCCCAGACAGCCTTaGAAACATGCGAGGGTGGTTACTGGAGCCTTCTCG +
Preference number: 6 (lower is better)
Translates to: MASTLPCFPRQP*KHARVVTGAFS
Trigger: CGAGAAGGCTCCAGTAACCACCCTCGCATGTTTGCAAGGCTGTCTGGGAAAACATGGCAGGGTTGACGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS CCA 72 bp AAAGGCATCGGTTGGCATCTCCTGGACATGTTTCTTTaGGTCCCACTGTGTGCCCTGGAAGGTGTGGGGCTT +
Preference number: 6 (lower is better)
Translates to: KGIGWHLLDMFL*VPLCALEGVGL
Trigger: AAGCCCCACACCTTCCAGGGCACACAGTGGGACCCAAAGAAACATGTCCAGGAGATGCCAACCGATGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS CCA 72 bp AAGACGATGTCGCCAAAGGCATCGGTTGGCATCTCCTaGACATGTTTCTTTGGGTCCCACTGTGTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: KTMSPKASVGIS*TCFFGSHCVPW
Trigger: CCAGGGCACACAGTGGGACCCAAAGAAACATGTCCAGGAGATGCCAACCGATGCCTTTGGCGACATCGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5
CDS CCA 72 bp CATGTTTTCCCAGACAGCCTTGCAAACATGCGAGGGTaGTTACTGGAGCCTTCTCGGACCCGCGTGATTCCA +
Preference number: 6 (lower is better)
Translates to: HVFPDSLANMRG*LLEPSRTRVIP
Trigger: TGGAATCACGCGGGTCCGAGAAGGCTCCAGTAACCACCCTCGCATGTTTGCAAGGCTGTCTGGGAAAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS CAA 72 bp ACCCCGTTCTCCAGGAAGAGCTTCACAAACTCAGGCTaGTTGGAGATGAGTGCAGCTGTCATCGTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: TPFSRKSFTNSG*LEMSAAVIVGC
Trigger: GCACCCCACGATGACAGCTGCACTCATCTCCAACAAGCCTGAGTTTGTGAAGCTCTTCCTGGAGAACGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 72 bp CATGGCGTCAACCCTGCCATGTTTTCCCAGACAGCCTaGCAAACATGCGAGGGTGGTTACTGGAGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: HGVNPAMFSQTA*QTCEGGYWSLL
Trigger: GAGAAGGCTCCAGTAACCACCCTCGCATGTTTGCAAGGCTGTCTGGGAAAACATGGCAGGGTTGACGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS GCA 72 bp GGGATCTTGATGGCCACACCTCCTCTTTCCTTGGTCTaGTCCGATATGAACTTCTCCAGCCTGGTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: GILMATPPLSLV*SDMNFSSLVLR
Trigger: TCTGAGGACCAGGCTGGAGAAGTTCATATCGGAGCAGACCAAGGAAAGAGGAGGTGTGGCCATCAAGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS GCA 72 bp ATGGCGTCAACCTTATTGCTGATGTCCTCGATCTTCTaGTCGGGCCGCTGCTTTTGCTGGAACTGTCGGTTC +
Preference number: 6 (lower is better)
Translates to: MASTLLLMSSIF*SGRCFCWNCRF
Trigger: GAACCGACAGTTCCAGCAAAAGCAGCGGCCCGAGCAGAAGATCGAGGACATCAGCAATAAGGTTGACGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000498430.5
CDS CAA 72 bp CCGTTCTCCAGGAAGAGCTTCACAAACTCAGGCTTGTaGGAGATGAGTGCAGCTGTCATCGTGGGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: PFSRKSFTNSGL*EMSAAVIVGCR
Trigger: TCTGCACCCCACGATGACAGCTGCACTCATCTCCAACAAGCCTGAGTTTGTGAAGCTCTTCCTGGAGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 90 bp TTCAGCTGCACCCCGTTCTCCAGGAAGAGCTTCACAAACTCAGGCTaGTTGGAGATGAGTGCAGCTGTCATCGTGGGGTGCAGATCTGAA +
Preference number: 6 (lower is better)
Translates to: FSCTPFSRKSFTNSG*LEMSAAVIVGCRSE
Trigger: TTCAGATCTGCACCCCACGATGACAGCTGCACTCATCTCCAACAAGCCTGAGTTTGTGAAGCTCTTCCTGGAGAACGGGGTGCAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS TCA 72 bp CCAGGAAGAGCTTCACAAACTCAGGCTTGTTGGAGATaGGTGCAGCTGTCATCGTGGGGTGCAGATCTGAAG +
Preference number: 6 (lower is better)
Translates to: PGRASQTQACWR*VQLSSWGADLK
Trigger: CTTCAGATCTGCACCCCACGATGACAGCTGCACTCATCTCCAACAAGCCTGAGTTTGTGAAGCTCTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 72 bp GATTCCACCACCGTGAGATGCAGGAACTGTCTAGATTaGCAGACAGAGCTTGTCCTTGACCCCCAAAGCTCC +
Preference number: 6 (lower is better)
Translates to: DSTTVRCRNCLD*QTELVLDPQSS
Trigger: GGAGCTTTGGGGGTCAAGGACAAGCTCTGTCTGCAAATCTAGACAGTTCCTGCATCTCACGGTGGTGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS CAA 90 bp TGCCTTATTGCTGATGTCCTCGATCTTCTGCTCGGGCCGCTGCTTTaGCTGGAACTGTCGGTTCTGGAGGTAGTTCTCCTTCAGGTAGAT +
Preference number: 6 (lower is better)
Translates to: CLIADVLDLLLGPLL*LELSVLEVVLLQVD
Trigger: ATCTACCTGAAGGAGAACTACCTCCAGAACCGACAGTTCCAGCAAAAGCAGCGGCCCGAGCAGAAGATCGAGGACATCAGCAATAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397932.6
CDS CAA 90 bp AACCTTATTGCTGATGTCCTCGATCTTCTGCTCGGGCCGCTGCTTTaGCTGGAACTGTCGGTTCTGGAGGTAGTTCTCCTTCAGGTAGAT +
Preference number: 6 (lower is better)
Translates to: NLIADVLDLLLGPLL*LELSVLEVVLLQVD
Trigger: ATCTACCTGAAGGAGAACTACCTCCAGAACCGACAGTTCCAGCAAAAGCAGCGGCCCGAGCAGAAGATCGAGGACATCAGCAATAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000498430.5
CDS GCA 72 bp ATCTTGGGCCCCAGCGTCTTACTGATGGTAAAAATGTaGATGAGCCGGAGGCAGAACAGGATGAAGTCCAGA +
Preference number: 6 (lower is better)
Translates to: ILGPSVLLMVKM*MSRRQNRMKSR
Trigger: TCTGGACTTCATCCTGTTCTGCCTCCGGCTCATGCACATTTTTACCATCAGTAAGACGCTGGGGCCCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CCA 72 bp ACAATCCTGCTTTCCGTGAAGGTCTCAAACATCTCCTaGAAGAACACGCTCAGTTTCTGCTGGATCAGGGAG +
Preference number: 6 (lower is better)
Translates to: TILLSVKVSNIS*KNTLSFCWIRE
Trigger: CTCCCTGATCCAGCAGAAACTGAGCGTGTTCTTCCAGGAGATGTTTGAGACCTTCACGGAAAGCAGGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 90 bp AGGAAGAAGAAGACGTCCTTCATCATCCGCTTCACAATGATGATCTaGGGCCCCAGCGTCTTACTGATGGTAAAAATGTGCATGAGCCGG +
Preference number: 6 (lower is better)
Translates to: RKKKTSFIIRFTMMI*GPSVLLMVKMCMSR
Trigger: CCGGCTCATGCACATTTTTACCATCAGTAAGACGCTGGGGCCCAAGATCATCATTGTGAAGCGGATGATGAAGGACGTCTTCTTCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000498430.5
CDS CAA 90 bp TCAGACAGTTTGGAACTTTCCACAAAATACACGCATTCTTTCTTCTaGATGTTTTCAGGAATCCACGAACTGAGGCTTTCTTGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: SDSLELSTKYTHSFF*MFSGIHELRLSCLS
Trigger: TGACAAGCAAGAAAGCCTCAGTTCGTGGATTCCTGAAAACATCAAGAAGAAAGAATGCGTGTATTTTGTGGAAAGTTCCAAACTGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300481.13
ENST00000300482.9
ENST00000397928.6
ENST00000397932.6
ENST00000431901.5