RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000133107

Ensembl transcript IDs: ENST00000338947.9, ENST00000355779.6, ENST00000358477.6, ENST00000379673.2, ENST00000379679.5, ENST00000379705.8, ENST00000426868.6, ENST00000488717.5, ENST00000494529.1, ENST00000625583.2

Found 609 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTCCGTATTCCTTTCTCTATGGTCTACTAACACACATTGTTCACTaGGACCGGGAATGCTCAGGTCACCCCGTGAAGCTAATCCTCGAG +
Preference number: 1 (lower is better)
Translates to: CPYSFLYGLLTHIVH*DRECSGHPVKLILE
Trigger: CTCGAGGATTAGCTTCACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGTAGACCATAGAGAAAGGAATACGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR CCA 90 bp CTCTTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATaGTCTACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGG +
Preference number: 1 (lower is better)
Translates to: LFPTCNPSVSVFLSL*STNTHCSLRPGMLR
Trigger: CCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR GCA 90 bp AAGATGTTTGCAATAGCAAATAAAGCCTCTGCCACCAGAGTGGGATaGCACATGTCCCATGATTCTCGTGGATTAAGGGCACTGTACTTT +
Preference number: 1 (lower is better)
Translates to: KMFAIANKASATRVG*HMSHDSRGLRALYF
Trigger: AAAGTACAGTGCCCTTAATCCACGAGAATCATGGGACATGTGGCATCCCACTCTGGTGGCAGAGGCTTTATTTGCTATTGCAAACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR CCA 90 bp CTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTaGAAAGTTTGCTTCCTCTTAGTAATCCCAGGACTTCAAAGCGGA +
Preference number: 1 (lower is better)
Translates to: LPNLKTPSRHSQIVL*KVCFLLVIPGLQSG
Trigger: TCCGCTTTGAAGTCCTGGGATTACTAAGAGGAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR TCA 90 bp GTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTaGAAAGGAGGGTCTTACTTGCTCCAAATACATTCCTCTATTACC +
Preference number: 1 (lower is better)
Translates to: VSNIWGLLESSFLGH*KGGSYLLQIHSSIT
Trigger: GGTAATAGAGGAATGTATTTGGAGCAAGTAAGACCCTCCTTTTCAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR TCA 90 bp TTGCTGCTGATCTCGGATGAATCAGGGTGGTTAAATCAAAAAGGCTaGAATTCTTTTTCTTGTCCTTGCTATTACCTTCGCTATCACTCT +
Preference number: 1 (lower is better)
Translates to: LLLISDESGWLNQKG*NSFSCPCYYLRYHS
Trigger: AGAGTGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGAATTTCAGCCTTTTTGATTTAACCACCCTGATTCATCCGAGATCAGCAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR TCA 90 bp CTTATGCTATTGTTACTTATGTTTCCTCCACCTTTGCTAGAAAATTaGCTTTGCTTCTTTGAGAACAGCATGGTGAGTCTACTATCCTTG +
Preference number: 1 (lower is better)
Translates to: LMLLLLMFPPPLLEN*LCFFENSMVSLLSL
Trigger: CAAGGATAGTAGACTCACCATGCTGTTCTCAAAGAAGCAAAGTCAATTTTCTAGCAAAGGTGGAGGAAACATAAGTAACAATAGCATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR TCA 90 bp ATTGATTTAGGCCATTTGCAAATGCTAGCAACACAAGGCAGTATATaGATAGAAACTTCAAAATGTCCAGGAGCATTCTTCCCAGAGATA +
Preference number: 1 (lower is better)
Translates to: IDLGHLQMLATQGSI*IETSKCPGAFFPEI
Trigger: TATCTCTGGGAAGAATGCTCCTGGACATTTTGAAGTTTCTATTCATATACTGCCTTGTGTTGCTAGCATTTGCAAATGGCCTAAATCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR TCA 90 bp TTGCTTATGTTATGTCTTTCAGAGGCAATTGCTGCTGATCTCGGATaGATCAGGGTGGTTAAATCAAAAAGGCTGAAATTCTTTTTCTTG +
Preference number: 1 (lower is better)
Translates to: LLMLCLSEAIAADLG*IRVVKSKRLKFFFL
Trigger: CAAGAAAAAGAATTTCAGCCTTTTTGATTTAACCACCCTGATTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGACATAACATAAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR-3UTR CCA 90 bp TTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGACTTGGGGCCTCTGCCACCAGAGTaGGATGCCACATGTCCCATG +
Preference number: 2 (lower is better)
Translates to: FLHKCVQIHLIRYQRDLGPLPPE*DATCPM
Trigger: CATGGGACATGTGGCATCCCACTCTGGTGGCAGAGG...CCCCAAGTCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR CAA 90 bp TTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGACTaGGGGCTCGGGATGACATTGAAGGGAGTAGGCAGAGTACCTCCT +
Preference number: 2 (lower is better)
Translates to: LHKCVQIHLIRYQRD*GLGMTLKGVGRVPP
Trigger: AGGAGGTACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCCCAAGTCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR TCA 90 bp ACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTGAAGCTGTGTCCAGATCCATTTaGTCAGGTACCAGAGAGACT +
Preference number: 2 (lower is better)
Translates to: TNTHCSLRPGMLRSPREAVSRSI*SGTRET
Trigger: AGTCTCTCTGGTACCTGATCAAATGGATCTGGACAC...AGCTTCACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR CAA 90 bp TTTGGTATTATAGGAACCGTGTCCTCCACCACCACCTTCTCTGACTaGAATGGACACACTCTCTTTCCTACCTGTAACCCCAGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: FGIIGTVSSTTTFSD*NGHTLFPTCNPSVS
Trigger: GGACACACTGGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGTGGTGGAGGACACGGTTCCTATAATACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR GCA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTGCCACCAGAGTGGGATaGCACATGTCCCATGATTCT +
Preference number: 2 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSATRVG*HMSHDS
Trigger: AGAATCATGGGACATGTGGCATCCCACTCTGGTGGC...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR-3UTR GCA 90 bp TGGTCTACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTCCAGGGCAGAGCCATTaGTTATGTTATGTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: WSTNTHCSLRPGMLRSPRPGQSH*LCYVFQ
Trigger: CTGAAAGACATAACATAAGCAATGGCTCTGCCCTGG...ACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGTAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR-3UTR TCA 90 bp TTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCTGGTCCTGCAGCCTGTTaGCGAGCAACTTCTTCGCTA +
Preference number: 2 (lower is better)
Translates to: FEDSFEAFADCIVESLLPGPAAC*RATSSL
Trigger: TAGCGAAGAAGTTGCTCGTCAACAGGCTGCAGGACC...AGGAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
3UTR CAA 90 bp GGCTTTCTTCTCATCTTTTTCTTGCACAAGTGTGTCCAGATCCATTaGATCAGGTACCAGAGAGACTTGGGGCTCGGGATGACATTGAAG +
Preference number: 2 (lower is better)
Translates to: GFLLIFFLHKCVQIH*IRYQRDLGLGMTLK
Trigger: CTTCAATGTCATCCCGAGCCCCAAGTCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAAAAAGATGAGAAGAAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR CAA 90 bp GCAGCTCTAGAGGAAATTAACGGTTTTGCTACTGGTGAATTTGACTaGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTA +
Preference number: 2 (lower is better)
Translates to: AALEEINGFATGEFD*QRRLHCQPSNGVTV
Trigger: TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTCACCAGTAGCAAAACCGTTAATTTCCTCTAGAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR TCA 90 bp GTCCTCTTCTTTTGCATGTTTCTCCTTTGGTATTATAGGAACCGTGTCCTCCACGTGTCCAGATCCATTTaGTCAGGTACCAGAGAGACT +
Preference number: 2 (lower is better)
Translates to: VLFFCMFLLWYYRNRVLHVSRSI*SGTRET
Trigger: AGTCTCTCTGGTACCTGATCAAATGGATCTGGACAC...GTGGAGGACACGGTTCCTATAATACCAAAGGAGAAACATGCAAAAGAAGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR TCA 90 bp CATCTTTTTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGAATGCCACATGTCCCATaGTTCTCGTGGATTAAGGGC +
Preference number: 2 (lower is better)
Translates to: HLFLAQVCPDPFDQVPERMPHVP*FSWIKG
Trigger: GCCCTTAATCCACGAGAATCATGGGACATGTGGCAT...TCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAAAAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR CAA 90 bp AGTCTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATaGTGGAAAGTTTGCTTCCTCTTAGTAATCCCAGGACTTCAAAGC +
Preference number: 2 (lower is better)
Translates to: SLPNLKTPSRHSQIV*WKVCFLLVIPGLQS
Trigger: GCTTTGAAGTCCTGGGATTACTAAGAGGAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR TCA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTATTTGCAGTAAACAGTaGGATCAGACGCAGAGAACT +
Preference number: 2 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSICSKQ*DQTQRT
Trigger: AGTTCTCTGCGTCTGATCTCACTGTTTACTGCAAAT...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR CAA 90 bp GAGCAACTTCTTCGCTATCACTCTTTTCATCTGAGTCTGCCGAATTaGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTT +
Preference number: 2 (lower is better)
Translates to: EQLLRYHSFHLSLPN*KTPSRHSQIVLWKV
Trigger: AACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAAAGAGTGATAGCGAAGAAGTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
3UTR-3UTR TCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTAAAGAAGGGACTCTTATaGAGCATACCAAACTCATTC +
Preference number: 2 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVKKGLL*SIPNSF
Trigger: GAATGAGTTTGGTATGCTTCATAAGAGTCCCTTCTT...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR TCA 90 bp AATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCGTAATCTTCGTGGGTaGCTGTGTCTGGGAGGTTTA +
Preference number: 2 (lower is better)
Translates to: NTYVYGKRFLLQVSQSCGRNLRG*LCLGGL
Trigger: TAAACCTCCCAGACACAGTCACCCACGAAGATTACG...ACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR GCA 90 bp TCTTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTAAGCATCTCTAATCATTaGAGCAACGTATCGCTTCAC +
Preference number: 2 (lower is better)
Translates to: SFLPVTPVCPYSFLYGLLSISNH*SNVSLH
Trigger: GTGAAGCGATACGTTGCTGCAATGATTAGAGATGCT...TAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTAACTGAAAGGAAACCCTaGAACAACCTAAAACACTAC +
Preference number: 2 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVTERKP*NNLKHY
Trigger: GTAGTGTTTTAGGTTGTTCCAGGGTTTCCTTTCAGT...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR CAA 90 bp ATTGTAAGCATATTTACAGGGCCACAATGGATGGTTCTTACTAGGTaGAGTTTTAAGGACACTGAGCATGGAAGGCAGCTGTATACACCA +
Preference number: 2 (lower is better)
Translates to: IVSIFTGPQWMVLTR*SFKDTEHGRQLYTP
Trigger: TGGTGTATACAGCTGCCTTCCATGCTCAGTGTCCTTAAAACTCAACCTAGTAAGAACCATCCATTGTGGCCCTGTAAATATGCTTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR CAA 90 bp TGCTATTACCTTCGCTATCACTCTTTTCATCTGAGTCTGCCGAATTaGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTT +
Preference number: 2 (lower is better)
Translates to: CYYLRYHSFHLSLPN*KTPSRHSQIVLWKV
Trigger: AACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAAAGAGTGATAGCGAAGGTAATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR-3UTR TCA 90 bp ACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAAGATGAGCCCAAATATTaGCCAAAACAGGGACTGCAG +
Preference number: 2 (lower is better)
Translates to: TTENTYVYGKRFLLQVSQDEPKY*PKQGLQ
Trigger: CTGCAGTCCCTGTTTTGGTCAATATTTGGGCTCATC...TTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR GCA 90 bp GGCTTGTGTTTCTCCAAATCTATCTGGCCCATTCCTAAATTCCCAAAAACCAGGTTTGCACACTTCTCTTaGTTTAGAAGAAGGGACTCT +
Preference number: 2 (lower is better)
Translates to: GLCFSKSIWPIPKFPKTRFAHFS*FRRRDS
Trigger: AGAGTCCCTTCTTCTAAAGCAAGAGAAGTGTGCAAA...CCTGGTTTTTGGGAATTTAGGAATGGGCCAGATAGATTTGGAGAAACACAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR CCA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTTCGCAGATTGTATTGTaGAAAGTTTGCTTCCTCTTA +
Preference number: 2 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSSQIVL*KVCFLL
Trigger: TAAGAGGAAGCAAACTTTCCACAATACAATCTGCGA...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CCA 90 bp TCTTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTATGCATGTTTCTCCTTTaGTATTATAGGAACCGTGTC +
Preference number: 2 (lower is better)
Translates to: SFLPVTPVCPYSFLYGLLCMFLL*YYRNRV
Trigger: GACACGGTTCCTATAATACCAAAGGAGAAACATGCA...TAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR GCA 90 bp AAGTATTTCAAGTTGCTGTCTACGTCAAGGCAAGAAAGTGAGTATGTTTTTGCAGAAAGGCAGTTACAATaGAGTGGTGAAGGGAATGGC +
Preference number: 2 (lower is better)
Translates to: KYFKLLSTSRQESEYVFAERQLQ*SGEGNG
Trigger: GCCATTCCCTTCACCACTGCATTGTAACTGCCTTTC...TGCAAAAACATACTCACTTTCTTGCCTTGACGTAGACAGCAACTTGAAATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR GCA 90 bp CTCTTTTCATCTGAGTCTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATAGTAAATTCATGCTGTaGTTTGACATTGGTCACATA +
Preference number: 2 (lower is better)
Translates to: LFSSESAEFEDSFEAFADSKFML*FDIGHI
Trigger: TATGTGACCAATGTCAAAGCACAGCATGAATTTACT...ATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR GCA 90 bp CTTCCTCTTAGTAATCCCAGGACTTCAAAGCGGAAACTAGAAATGTCTTGCTTTAGCATCTCTAATCATTaGAGCAACGTATCGCTTCAC +
Preference number: 2 (lower is better)
Translates to: LPLSNPRTSKRKLEMSCFSISNH*SNVSLH
Trigger: GTGAAGCGATACGTTGCTGCAATGATTAGAGATGCT...AAAGCAAGACATTTCTAGTTTCCGCTTTGAAGTCCTGGGATTACTAAGAGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTAACAGATTTCAAAACTTaGTGGCCTCTCTTCAATAAA +
Preference number: 2 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVTDFKT*WPLFNK
Trigger: TTTATTGAAGAGAGGCCACCAAGTTTTGAAATCTGT...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR CCA 90 bp AAAGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTTGTATGTCCCAAACATaGTGGCACCAACAAACTCAG +
Preference number: 2 (lower is better)
Translates to: KALFVQISILYLHGQQSVCMSQT*WHQQTQ
Trigger: CTGAGTTTGTTGGTGCCACCATGTTTGGGACATACA...AACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CCA 90 bp TTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCTTCGCAGATTGTATTGTaGAAAGTTTGCTTCCTCTTA +
Preference number: 2 (lower is better)
Translates to: FEDSFEAFADCIVESLLPSQIVL*KVCFLL
Trigger: TAAGAGGAAGCAAACTTTCCACAATACAATCTGCGA...AGGAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR CAA 90 bp TTAGTGAAAATTTCAAGACATAGTACAAGGACAACTTACTTGGTATaGGTGATGTCTTCTCAAGTTATCAGCAGCTCGCCTCCCTATTGT +
Preference number: 2 (lower is better)
Translates to: LVKISRHSTRTTYLV*VMSSQVISSSPPYC
Trigger: ACAATAGGGAGGCGAGCTGCTGATAACTTGAGAAGACATCACCAATACCAAGTAAGTTGTCCTTGTACTATGTCTTGAAATTTTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
3UTR-3UTR GCA 90 bp AGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTGGTTTCCATTCTATATCTaGATGGTCAGCAATCAGTTG +
Preference number: 2 (lower is better)
Translates to: SFVRANFHSISAWSAISWFPFYI*MVSNQL
Trigger: CAACTGATTGCTGACCATGCAGATATAGAATGGAAA...CCAACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CCA 90 bp GTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCACGTAATCGTATTCCTTTCTCTATaGTCTACTAACACACATTGT +
Preference number: 2 (lower is better)
Translates to: VYGKRFLLQVSQSCGHVIVFLSL*STNTHC
Trigger: ACAATGTGTGTTAGTAGACCATAGAGAAAGGAATAC...GATTACGTGACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR CAA 90 bp CACCCTGAAGTACGCACTTACAAACCTCAAAGAAACAGTATTTCTTaGCTTGCTATCCTGCTGTTGTTTGACTTTTCTTATTTTATCCCT +
Preference number: 2 (lower is better)
Translates to: HPEVRTYKPQRNSIS*LAILLLFDFSYFIP
Trigger: AGGGATAAAATAAGAAAAGTCAAACAACAGCAGGATAGCAAGCAAAGAAATACTGTTTCTTTGAGGTTTGTAAGTGCGTACTTCAGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR CAA 90 bp AAATCTGGTGTGTGTTTCACACTTACAGCACATCTTAATTCAGACTaGTCACACTTACAAGTGATTAATAGCCGTATGAGTATAGGAGCT +
Preference number: 2 (lower is better)
Translates to: KSGVCFTLTAHLNSD*SHLQVINSRMSIGA
Trigger: AGCTCCTATACTCATACGGCTATTAATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACACACACCAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR CAA 90 bp TTTATTTTAGTGAAAATTTCAAGACATAGTACAAGGACAACTTACTaGGTATTGGTGATGTCTTCTCAAGTTATCAGCAGCTCGCCTCCC +
Preference number: 2 (lower is better)
Translates to: FILVKISRHSTRTTY*VLVMSSQVISSSPP
Trigger: GGGAGGCGAGCTGCTGATAACTTGAGAAGACATCACCAATACCAAGTAAGTTGTCCTTGTACTATGTCTTGAAATTTTCACTAAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426868.6
3UTR-3UTR TCA 90 bp AATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCTTACTTGGTATTGGTaGTGTCTTCTCAAGTTATCA +
Preference number: 2 (lower is better)
Translates to: NTYVYGKRFLLQVSQSCGLTWYW*CLLKLS
Trigger: TGATAACTTGAGAAGACATCACCAATACCAAGTAAG...ACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
3UTR-3UTR GCA 90 bp AATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCCAAAGCTTTGTTCGTaGAAATTTCCATTCTATATC +
Preference number: 2 (lower is better)
Translates to: NLKTPSRHSQIVLWKVCFPKLCS*KFPFYI
Trigger: GATATAGAATGGAAATTTGCACGAACAAAGCTTTGG...GAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR CAA 90 bp CTGAAGTACGCACTTACAAACCTCAAAGAAACAGTATTTCTTTGCTaGCTATCCTGCTGTTGTTTGACTTTTCTTATTTTATCCCTACTC +
Preference number: 2 (lower is better)
Translates to: LKYALTNLKETVFLC*LSCCCLTFLILSLL
Trigger: GAGTAGGGATAAAATAAGAAAAGTCAAACAACAGCAGGATAGCAAGCAAAGAAATACTGTTTCTTTGAGGTTTGTAAGTGCGTACTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR TCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATACTTCTTTTACTTACTaGAAGGAAACCCTGGAACAA +
Preference number: 2 (lower is better)
Translates to: GNEKLSAITLFSLGPMINTSFTY*KETLEQ
Trigger: TTGTTCCAGGGTTTCCTTTCAGTAAGTAAAAGAAGT...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR TCA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTTATAAAGATTACTGGTaGAAAGAGGAGACTGCTAGT +
Preference number: 2 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMIYKDYW*KEETAS
Trigger: ACTAGCAGTCTCCTCTTTTCACCAGTAATCTTTATA...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR GCA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTAAGGAGGGTCTTACTTaGTCCAAATACATTCCTCTA +
Preference number: 2 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVIKEGLT*SKYIPL
Trigger: TAGAGGAATGTATTTGGAGCAAGTAAGACCCTCCTT...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR GCA 90 bp AAAGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTTTTCCATTCTATATCTaGATGGTCAGCAATCAGTTG +
Preference number: 2 (lower is better)
Translates to: KALFVQISILYLHGQQSVFPFYI*MVSNQL
Trigger: CAACTGATTGCTGACCATGCAGATATAGAATGGAAA...AACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR TCA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTTTAGATATGACTCCATaGGAAGAAGACTTGTTTGCT +
Preference number: 2 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVILDMTP*EEDLFA
Trigger: AGCAAACAAGTCTTCTTCTCATGGAGTCATATCTAA...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR TCA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTATCACATGCAATTTCTaGGGTTCGCAGAGTAATTTT +
Preference number: 2 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVIITCNF*GSQSNF
Trigger: AAAATTACTCTGCGAACCTCAGAAATTGCATGTGAT...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR GCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATGTTTCTGTGGGTTATTaGAACAGTACAAGAATACAA +
Preference number: 2 (lower is better)
Translates to: GNEKLSAITLFSLGPMINVSVGY*NSTRIQ
Trigger: TTGTATTCTTGTACTGTTGCAATAACCCACAGAAAC...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR TCA 72 bp TGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTaGCTGTATCCAGGCTTGGTCCCATTGTCCCAATCT +
Preference number: 3 (lower is better)
Translates to: CRDVFTVSLVTV*LYPGLVPLSQS
Trigger: AGATTGGGACAATGGGACCAAGCCTGGATACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR TCA 72 bp AGCCTCTGCCACCAGAGTGGGATGCCACATGTCCCATaGTTCTCGTGGATTAAGGGCACTGTACTTTACAAA +
Preference number: 3 (lower is better)
Translates to: SLCHQSGMPHVP*FSWIKGTVLYK
Trigger: TTTGTAAAGTACAGTGCCCTTAATCCACGAGAATCATGGGACATGTGGCATCCCACTCTGGTGGCAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR GCA 72 bp GCAATAGCAAATAAAGCCTCTGCCACCAGAGTGGGATaGCACATGTCCCATGATTCTCGTGGATTAAGGGCA +
Preference number: 3 (lower is better)
Translates to: AIANKASATRVG*HMSHDSRGLRA
Trigger: TGCCCTTAATCCACGAGAATCATGGGACATGTGGCATCCCACTCTGGTGGCAGAGGCTTTATTTGCTATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR-3UTR CAA 90 bp TTTCATCTGAGTCTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTAAGGTACCAGAGAGACTaGGGGCTCGGGATGACATTG +
Preference number: 3 (lower is better)
Translates to: FHLSLPNLKTPSRHSQIVRYQRD*GLGMTL
Trigger: CAATGTCATCCCGAGCCCCAAGTCTCTCTGGTACCT...TACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR TCA 72 bp TCCTTTCTCTATGGTCTACTAACACACATTGTTCACTaGGACCGGGAATGCTCAGGTCACCCCGTGAAGCTA +
Preference number: 3 (lower is better)
Translates to: SFLYGLLTHIVH*DRECSGHPVKL
Trigger: TAGCTTCACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGTAGACCATAGAGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CAA 90 bp GTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCACGTAATCTGGTCCTGCAGCCTGTaGACGAGCAACTTCTTCGCT +
Preference number: 3 (lower is better)
Translates to: VYGKRFLLQVSQSCGHVIWSCSL*TSNFFA
Trigger: AGCGAAGAAGTTGCTCGTCAACAGGCTGCAGGACCA...GATTACGTGACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
3UTR-3UTR CAA 90 bp TGGTCTACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTTCACATCTTATGCCTTaGCAGGTTAACCCTTTCGTT +
Preference number: 3 (lower is better)
Translates to: WSTNTHCSLRPGMLRSPRSHLMP*QVNPFV
Trigger: AACGAAAGGGTTAACCTGCAAAGGCATAAGATGTGA...ACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGTAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR-3UTR CAA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTACCACCTTCTCTGACTaGAATGGACACACTCTCTTT +
Preference number: 3 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSTTFSD*NGHTLF
Trigger: AAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CAA 90 bp ACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTGAAGCTCATAACTTCTTGGTATaGGTGATGTCTTCTCAAGTT +
Preference number: 3 (lower is better)
Translates to: TNTHCSLRPGMLRSPREAHNFLV*VMSSQV
Trigger: AACTTGAGAAGACATCACCAATACCAAGAAGTTATG...AGCTTCACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR-3UTR CAA 90 bp TCTTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTAGTCTTTCAGAGGCAATaGCTGCTGATCTCGGATGAA +
Preference number: 3 (lower is better)
Translates to: SFLPVTPVCPYSFLYGLLVFQRQ*LLISDE
Trigger: TTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGAC...TAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR TCA 72 bp AAGTGGTCCTGCAGCCTGTTGACGAGCAACTTCTTCTaGAACAGAGAAGATTTGGTTTGCATTTTGCTCAGC +
Preference number: 3 (lower is better)
Translates to: KWSCSLLTSNFF*NREDLVCILLS
Trigger: GCTGAGCAAAATGCAAACCAAATCTTCTCTGTTTCAGAAGAAGTTGCTCGTCAACAGGCTGCAGGACCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR-3UTR CAA 90 bp CTTCCTCTTAGTAATCCCAGGACTTCAAAGCGGAAACTAGAAATGTCTTGCTTTCAGCTCGCCTCCCTATaGTTCCAAAACTTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: LPLSNPRTSKRKLEMSCFQLASL*FQNFLA
Trigger: AGCCAGAAAGTTTTGGAACAATAGGGAGGCGAGCTG...AAAGCAAGACATTTCTAGTTTCCGCTTTGAAGTCCTGGGATTACTAAGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CAA 90 bp CATTGCTTATGTTATGTCTTTCAGAGGCAATTGCTGCTGATCTCGGATGAATCACTGAGTCTGCCGAATTaGAAGACTCCTTCGAGGCAT +
Preference number: 3 (lower is better)
Translates to: HCLCYVFQRQLLLISDESLSLPN*KTPSRH
Trigger: ATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAG...TGATTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGACATAACATAAGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR TCA 72 bp TATTTACAGGGCCACAATGGATGGTTCTTACTAGGTTaGGTTTTAAGGACACTGAGCATGGAAGGCAGCTGT +
Preference number: 3 (lower is better)
Translates to: YLQGHNGWFLLG*VLRTLSMEGSC
Trigger: ACAGCTGCCTTCCATGCTCAGTGTCCTTAAAACTCAACCTAGTAAGAACCATCCATTGTGGCCCTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR TCA 72 bp CAAGACATAGTACAAGGACAACTTACTTGGTATTGGTaGTGTCTTCTCAAGTTATCAGCAGCTCGCCTCCCT +
Preference number: 3 (lower is better)
Translates to: QDIVQGQLTWYW*CLLKLSAARLP
Trigger: AGGGAGGCGAGCTGCTGATAACTTGAGAAGACATCACCAATACCAAGTAAGTTGTCCTTGTACTATGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
3UTR-3UTR CAA 90 bp TTTTGCATGTTTCTCCTTTGGTATTATAGGAACCGTGTCCTCCACCACCACCTTCTTCTCATCTTTTTCTaGCACAAGTGTGTCCAGATC +
Preference number: 3 (lower is better)
Translates to: FCMFLLWYYRNRVLHHHLLLIFF*HKCVQI
Trigger: GATCTGGACACACTTGTGCAAGAAAAAGATGAGAAG...AAGGTGGTGGTGGAGGACACGGTTCCTATAATACCAAAGGAGAAACATGCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR TCA 72 bp AGTATCACAATCTTGTGGTCACGTAATCTTCGTGGGTaGCTGTGTCTGGGAGGTTTAGATCATAGTCTATAC +
Preference number: 3 (lower is better)
Translates to: SITILWSRNLRG*LCLGGLDHSLY
Trigger: GTATAGACTATGATCTAAACCTCCCAGACACAGTCACCCACGAAGATTACGTGACCACAAGATTGTGATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR GCA 72 bp AACTTGCTCTTTTTATGTTCTGAAAGGCAGTTACAATaGAGTGGTGAAGGGAATGGCTCTGATGGACACATC +
Preference number: 3 (lower is better)
Translates to: NLLFLCSERQLQ*SGEGNGSDGHI
Trigger: GATGTGTCCATCAGAGCCATTCCCTTCACCACTGCATTGTAACTGCCTTTCAGAACATAAAAAGAGCAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR CCA 72 bp TATACTAGAGTCCTCTTCTTTTGCATGTTTCTCCTTTaGTATTATAGGAACCGTGTCCTCCACCACCACCTT +
Preference number: 3 (lower is better)
Translates to: YTRVLFFCMFLL*YYRNRVLHHHL
Trigger: AAGGTGGTGGTGGAGGACACGGTTCCTATAATACCAAAGGAGAAACATGCAAAAGAAGAGGACTCTAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CAA 90 bp AAAGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTCAGCTCGCCTCCCTATaGTTCCAAAACTTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: KALFVQISILYLHGQQSVQLASL*FQNFLA
Trigger: AGCCAGAAAGTTTTGGAACAATAGGGAGGCGAGCTG...AACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CAA 90 bp GTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCACGTAATCTCCTCGAGATTCCAGTaGAATATTTCTCTCAAGTGG +
Preference number: 3 (lower is better)
Translates to: VYGKRFLLQVSQSCGHVISSRFQ*NISLKW
Trigger: CCACTTGAGAGAAATATTCAACTGGAATCTCGAGGA...GATTACGTGACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CAA 90 bp TTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTAACTCAAGTATCACAATCTaGTGGTCACGTAATCTTCGT +
Preference number: 3 (lower is better)
Translates to: FPTCNPSVSVFLSLWSTNSSITI*WSRNLR
Trigger: ACGAAGATTACGTGACCACAAGATTGTGATACTTGA...GTTAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CAA 90 bp AAAGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTTCTTCCCAGAGATATTaGCAGAGGTCCCAGGTGAGA +
Preference number: 3 (lower is better)
Translates to: KALFVQISILYLHGQQSVSSQRY*QRSQVR
Trigger: TCTCACCTGGGACCTCTGCAAATATCTCTGGGAAGA...AACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR TCA 72 bp TTCAAAACTTGGTGGCCTCTCTTCAATAAAGAGCTGTaGGACTGGATAGTCATTTACTCAGCTAAATCCCAG +
Preference number: 3 (lower is better)
Translates to: FKTWWPLFNKEL*DWIVIYSAKSQ
Trigger: CTGGGATTTAGCTGAGTAAATGACTATCCAGTCTCACAGCTCTTTATTGAAGAGAGGCCACCAAGTTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR CAA 90 bp AATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCGAGGCATTCGCAGATaGTATTGTGGAAAGTTTGCT +
Preference number: 3 (lower is better)
Translates to: NTYVYGKRFLLQVSQSCGRGIRR*YCGKFA
Trigger: AGCAAACTTTCCACAATACAATCTGCGAATGCCTCG...ACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CAA 90 bp TCTCATCTTTTTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGTGCTGTGCTTTGACATaGGTCACATATAAATTGATG +
Preference number: 3 (lower is better)
Translates to: SHLFLAQVCPDPFDQVPECCALT*VTYKLM
Trigger: CATCAATTTATATGTGACCAATGTCAAAGCACAGCA...CTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAAAAAGATGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR TCA 72 bp GGCCATTTGCAAATGCTAGCAACACAAGGCAGTATATaGATAGAAACTTCAAAATGTCCAGGAGCATTCTTC +
Preference number: 3 (lower is better)
Translates to: GHLQMLATQGSI*IETSKCPGAFF
Trigger: GAAGAATGCTCCTGGACATTTTGAAGTTTCTATTCATATACTGCCTTGTGTTGCTAGCATTTGCAAATGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR TCA 72 bp TTATGTCTTTCAGAGGCAATTGCTGCTGATCTCGGATaGATCAGGGTGGTTAAATCAAAAAGGCTGAAATTC +
Preference number: 3 (lower is better)
Translates to: LCLSEAIAADLG*IRVVKSKRLKF
Trigger: GAATTTCAGCCTTTTTGATTTAACCACCCTGATTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGACATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR-3UTR CAA 90 bp CATTGCTTATGTTATGTCTTTCAGAGGCAATTGCTGCTGATCTCGGATGAATCAATAGCTATTAACATGTaGAGTAGAACAACCAGAGAG +
Preference number: 3 (lower is better)
Translates to: HCLCYVFQRQLLLISDESIAINM*SRTTRE
Trigger: CTCTCTGGTTGTTCTACTCAACATGTTAATAGCTAT...TGATTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGACATAACATAAGCAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR-3UTR CAA 90 bp AATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCAACTCATCCAAAGCTTaGTTCGTGCAAATTTCCATT +
Preference number: 3 (lower is better)
Translates to: NLKTPSRHSQIVLWKVCFNSSKA*FVQISI
Trigger: AATGGAAATTTGCACGAACAAAGCTTTGGATGAGTT...GAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR-3UTR CAA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTAGCAACATCTGGGGGTaGTTAGAATCATCCTTTCTA +
Preference number: 3 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVISNIWG*LESSFL
Trigger: TAGAAAGGATGATTCTAACAACCCCCAGATGTTGCT...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR CAA 90 bp ACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATTCTTTTTCTTGTCCTaGCTATTACCTTCGCTATCA +
Preference number: 3 (lower is better)
Translates to: TTENTYVYGKRFLLQVSQFFFLS*LLPSLS
Trigger: TGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGAA...TTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488717.5
3UTR TCA 72 bp GTATTTCAAGTTGCTGTCTACGTCAAGGCAAGAAAGTaGGTATGTTTTTGCATTAGTTTAATTGCCATCCAG +
Preference number: 3 (lower is better)
Translates to: VFQVAVYVKARK*VCFCISLIAIQ
Trigger: CTGGATGGCAATTAAACTAATGCAAAAACATACTCACTTTCTTGCCTTGACGTAGACAGCAACTTGAAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR CAA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTATGGTTCTTACTAGGTaGAGTTTTAAGGACACTGAG +
Preference number: 3 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVIMVLTR*SFKDTE
Trigger: CTCAGTGTCCTTAAAACTCAACCTAGTAAGAACCAT...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR-3UTR CAA 90 bp AAAGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTACAACTTACTTGGTATaGGTGATGTCTTCTCAAGTT +
Preference number: 3 (lower is better)
Translates to: KALFVQISILYLHGQQSVTTYLV*VMSSQV
Trigger: AACTTGAGAAGACATCACCAATACCAAGTAAGTTGT...AACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
3UTR-3UTR CAA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTTGTTTCTGTGGGTTATaGCAACAGTACAAGAATACA +
Preference number: 3 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVICFCGL*QQYKNT
Trigger: TGTATTCTTGTACTGTTGCAATAACCCACAGAAACA...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR GCA 72 bp AAATTGATGAGCCCAAATATTGACCAAAACAGGGACTaGAGTGTCTCAAATAACGTTGAAAATGCATTATTC +
Preference number: 3 (lower is better)
Translates to: KLMSPNIDQNRD*SVSNNVENALF
Trigger: GAATAATGCATTTTCAACGTTATTTGAGACACTGCAGTCCCTGTTTTGGTCAATATTTGGGCTCATCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR TCA 90 bp ACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTGAAGCTGGGTGCCGTGCGGGGTaGGAGCACGCCCGGCAAATT +
Preference number: 4 (lower is better)
Translates to: TNTHCSLRPGMLRSPREAGCRAG*EHARQI
Trigger: AATTTGCCGGGCGTGCTCTCACCCCGCACGGCACCC...AGCTTCACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCGACCTGTCGATGTGCTaGGAGGCAAGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSDLSMC*EASSSR
Trigger: CCTGCTGCTGCTTGCCTCTCAGCACATCGACAGGTC...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCCCGAACTGGGCGGAGTaGGGATGCTCTGAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSPNWAE*GCSESE
Trigger: TTCGCTTTCAGAGCATCCTCACTCCGCCCAGTTCGG...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338947.9
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCATCTTCGGGCTGAAGTaGTGGGATCCGAGGACTGAC +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSIFGLK*WDPRTD
Trigger: GTCAGTCCTCGGATCCCATCACTTCAGCCCGAAGAT...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGACCTGTCGATGTGCTaGGAGGCAAGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLDLSMC*EASSSR
Trigger: CCTGCTGCTGCTTGCCTCTCAGCACATCGACAGGTC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR TCA 90 bp ACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTGAAGCTGAGGCTGTCCACATCTaGACTGGACACGCATTCCAC +
Preference number: 4 (lower is better)
Translates to: TNTHCSLRPGMLRSPREAEAVHI*TGHAFH
Trigger: GTGGAATGCGTGTCCAGTTCAGATGTGGACAGCCTC...AGCTTCACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGGTTGAGTCTGGAGCGTaGGTGACGGAGGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HICQQHLGVVRIILSRALVESGA*VTEAVH
Trigger: GTGGACAGCCTCCGTCACTCACGCTCCAGACTCAAC...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp TGGTCTACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTGGTCCTGCAGCCTGTTaGCGAGCAACTTCTTCGCTA +
Preference number: 4 (lower is better)
Translates to: WSTNTHCSLRPGMLRSPRGPAAC*RATSSL
Trigger: TAGCGAAGAAGTTGCTCGTCAACAGGCTGCAGGACC...ACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGTAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CCA 90 bp CTTGGGGCTCGGGATGACATTGAAGGGAGTAGGCAGAGTACCTCCTTCTTCAAATCATCCACTCGACGATaGTTGGTGGTGGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: LGARDDIEGSRQSTSFFKSSTRR*LVVDLA
Trigger: GGCAAGGTCCACCACCAACCATCGTCGAGTGGATGA...TTTGAAGAAGGAGGTACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR TCA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTGACCTGTCGATGTGCTaGGAGGCAAGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSDLSMC*EASSSR
Trigger: CCTGCTGCTGCTTGCCTCTCAGCACATCGACAGGTC...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCGGTCCTGCAGCCTGTTaGCGAGCAACTTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSGPAAC*RATSSE
Trigger: TTCAGAAGAAGTTGCTCGTCAACAGGCTGCAGGACC...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGTTGAGTCTGGAGCGTaGGTGACGGAGGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKVESGA*VTEAVH
Trigger: GTGGACAGCCTCCGTCACTCACGCTCCAGACTCAAC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCGCTTGACAGTGCAATaGGAGAGGGACTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLRLTVQ*ERDWPR
Trigger: CCTTGGCCAGTCCCTCTCTCATTGCACTGTCAAGCG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp ACCACCTTCTCTGACTTGAATGGACACACTCTCTTTCCTACCTGTAACCCCAGTCGCTTGACAGTGCAATaGGAGAGGGACTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TTFSDLNGHTLFPTCNPSRLTVQ*ERDWPR
Trigger: CCTTGGCCAGTCCCTCTCTCATTGCACTGTCAAGCG...ACTGGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCGCTTGACAGTGCAATaGGAGAGGGACTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFRLTVQ*ERDWPR
Trigger: CCTTGGCCAGTCCCTCTCTCATTGCACTGTCAAGCG...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CTTGGGGCTCGGGATGACATTGAAGGGAGTAGGCAGAGTACCTCCTTCTTCAAAGTTGGTGGTGGACCTTaGCTGTTCAAGTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LGARDDIEGSRQSTSFFKVGGGP*LFKSDL
Trigger: CAGGTCAGACTTGAACAGGCAAGGTCCACCACCAAC...TTTGAAGAAGGAGGTACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGAAAACGATCGAAGCTaGAGCCCACGCAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLENDRS*SPRSWH
Trigger: GTGCCAGCTGCGTGGGCTCCAGCTTCGATCGTTTTC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCCTCGACGATGGTTGGTaGTGGACCTTGCCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSLDDGW*WTLPVQ
Trigger: TTGAACAGGCAAGGTCCACCACCAACCATCGTCGAG...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCTCTGCCACCAGAGTaGGATGCCACATGTCCCATG +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLPLPPE*DATCPM
Trigger: CATGGGACATGTGGCATCCCACTCTGGTGGCAGAGG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTTACAGCGGACCTCGTaGGGTCGAGGCACTGAGACT +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFLQRTS*GRGTET
Trigger: AGTCTCAGTGCCTCGACCCCACGAGGTCCGCTGTAA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCAATGGGATCCGAGGACTaGCGGCGCGGGTGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLAMGSED*RRGCRA
Trigger: CGCACGGCACCCGCGCCGTCAGTCCTCGGATCCCAT...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp GGCTTGTGTTTCTCCAAATCTATCTGGCCCATTCCTAAATTCCCAAAAACCAGGGACCTGTCGATGTGCTaGGAGGCAAGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLCFSKSIWPIPKFPKTRDLSMC*EASSSR
Trigger: CCTGCTGCTGCTTGCCTCTCAGCACATCGACAGGTC...CCTGGTTTTTGGGAATTTAGGAATGGGCCAGATAGATTTGGAGAAACACAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGAGGCTGTCCACATCTaGACTGGACACGCATTCCAC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLEAVHI*TGHAFH
Trigger: GTGGAATGCGTGTCCAGTTCAGATGTGGACAGCCTC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTAAGTCTGGAGCGTGAGTaGCGGAGGCTGTCCACATCT +
Preference number: 4 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVSLERE*RRLSTS
Trigger: AGATGTGGACAGCCTCCGTCACTCACGCTCCAGACT...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGAGTCTGGAGCGTGAGTaGCGGAGGCTGTCCACATCT +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKSLERE*RRLSTS
Trigger: AGATGTGGACAGCCTCCGTCACTCACGCTCCAGACT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp TTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTAACGTTGAGTCTGGAGCGTaGGTGACGGAGGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FPTCNPSVSVFLSLWSTNVESGA*VTEAVH
Trigger: GTGGACAGCCTCCGTCACTCACGCTCCAGACTCAAC...GTTAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTACGCTTGACAGTGCAATaGGAGAGGGACTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVRLTVQ*ERDWPR
Trigger: CCTTGGCCAGTCCCTCTCTCATTGCACTGTCAAGCG...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCCTGGAACTTCTCGTCTaGTCCAGTAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSLELLV*SSRSLA
Trigger: TGCTAAGGACCTACTGGATCAGACGAGAAGTTCCAG...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GTGGTGAAGGGAATGGCTCTGATGGACACATCACAGCTCCATCATGAGCTGTATGCCACCAGAGTGGGATaGCACATGTCCCATGATTCT +
Preference number: 4 (lower is better)
Translates to: VVKGMALMDTSQLHHELYATRVG*HMSHDS
Trigger: AGAATCATGGGACATGTGGCATCCCACTCTGGTGGC...ATACAGCTCATGATGGAGCTGTGATGTGTCCATCAGAGCCATTCCCTTCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCCACTCGACGATGGTTaGTGGTGGACCTTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFPLDDG*WWTLPV
Trigger: AACAGGCAAGGTCCACCACCAACCATCGTCGAGTGG...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTCATCCACTCGACGATaGTTGGTGGTGGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFSSTRR*LVVDLA
Trigger: GGCAAGGTCCACCACCAACCATCGTCGAGTGGATGA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
3UTR CAA 72 bp ATAGGAACCGTGTCCTCCACCACCACCTTCTCTGACTaGAATGGACACACTCTCTTTCCTACCTGTAACCCC +
Preference number: 4 (lower is better)
Translates to: IGTVSSTTTFSD*NGHTLFPTCNP
Trigger: GGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGTGGTGGAGGACACGGTTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CTTGGGGCTCGGGATGACATTGAAGGGAGTAGGCAGAGTACCTCCTTCTTCAAACCTCTAGGGATTTCTTaGCACTGGCATAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGARDDIEGSRQSTSFFKPLGIS*HWHNLP
Trigger: AGGGAGATTATGCCAGTGTCAAGAAATCCCTAGAGG...TTTGAAGAAGGAGGTACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCGATGAGCCCAAATATTaGCCAAAACAGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSDEPKY*PKQGLQ
Trigger: CTGCAGTCCCTGTTTTGGTCAATATTTGGGCTCATC...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGGTCCTGCAGCCTGTTaGCGAGCAACTTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLGPAAC*RATSSE
Trigger: TTCAGAAGAAGTTGCTCGTCAACAGGCTGCAGGACC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCCCACCTTCTCTGACTTaGATGGACACACTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSPPSLT*MDTLSF
Trigger: GAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGG...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGTGGGGTCGAGGCACTaGGACTCCTTTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKVGSRH*DSFLNQ
Trigger: TTGGTTCAGAAAGGAGTCTCAGTGCCTCGACCCCAC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp TCTTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTAAGTCTGGAGCGTGAGTaGCGGAGGCTGTCCACATCT +
Preference number: 4 (lower is better)
Translates to: SFLPVTPVCPYSFLYGLLSLERE*RRLSTS
Trigger: AGATGTGGACAGCCTCCGTCACTCACGCTCCAGACT...TAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAGGCCTTGTAGATGTTaGGTCTGGAGCGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFRPCRC*VWSVSD
Trigger: GTCACTCACGCTCCAGACTCAACATCTACAAGGCCT...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTCCTTTCTAGGGCACTaGAAAGGAGGGTCTTACTTG +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSSFLGH*KGGSYL
Trigger: CAAGTAAGACCCTCCTTTTCAGTGCCCTAGAAAGGA...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTCGTCTCTGCAAAGTTaGAATCTTCGGGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSSSLQS*NLRAEV
Trigger: CACTTCAGCCCGAAGATTGCAACTTTGCAGAGACGA...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCATCGTACCAGCGAGATaGCAGCAGCTGTTGACAATT +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSIVPAR*QQLLTI
Trigger: AATTGTCAACAGCTGCTGGCATCTCGCTGGTACGAT...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGTTGGTGGTGGACCTTaGCTGTTCAAGTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLVGGGP*LFKSDL
Trigger: CAGGTCAGACTTGAACAGGCAAGGTCCACCACCAAC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGCCACCAGAGTGGGATaGCACATGTCCCATGATTCT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLATRVG*HMSHDS
Trigger: AGAATCATGGGACATGTGGCATCCCACTCTGGTGGC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTCTCTCAAGTGGTCCTaGAGCCTGTTGACGAGCAAC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLSLKWS*SLLTSN
Trigger: GTTGCTCGTCAACAGGCTGCAGGACCACTTGAGAGA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTCTCTCAAGTGGTCCTaGAGCCTGTTGACGAGCAAC +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFSLKWS*SLLTSN
Trigger: GTTGCTCGTCAACAGGCTGCAGGACCACTTGAGAGA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTCTTCTCCTCCAGCCTaGAAACTCATCGTACCAGCG +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFSSPPA*KLIVPA
Trigger: CGCTGGTACGATGAGTTTCCAGGCTGGAGGAGAAGA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTCTTCTCCTCCAGCCTaGAAACTCATCGTACCAGCG +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLSSPPA*KLIVPA
Trigger: CGCTGGTACGATGAGTTTCCAGGCTGGAGGAGAAGA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCTCGACGATGGTTGGTaGTGGACCTTGCCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFLDDGW*WTLPVQ
Trigger: TTGAACAGGCAAGGTCCACCACCAACCATCGTCGAG...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTCGACGATGGTTGGTaGTGGACCTTGCCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLLDDGW*WTLPVQ
Trigger: TTGAACAGGCAAGGTCCACCACCAACCATCGTCGAG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGCCACTCGACGATGGTTaGTGGTGGACCTTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKPLDDG*WWTLPV
Trigger: AACAGGCAAGGTCCACCACCAACCATCGTCGAGTGG...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp CTCTTTTCATCTGAGTCTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATCCACTCGACGATGGTTaGTGGTGGACCTTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LFSSESAEFEDSFEAFADPLDDG*WWTLPV
Trigger: AACAGGCAAGGTCCACCACCAACCATCGTCGAGTGG...ATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAACCTCTGCCACCAGAGTaGGATGCCACATGTCCCATG +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQPLPPE*DATCPM
Trigger: CATGGGACATGTGGCATCCCACTCTGGTGGCAGAGG...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCGACTGTATCCAGGCTTaGTCCCATTGTCCCAATCTT +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSDCIQA*SHCPNL
Trigger: AAGATTGGGACAATGGGACCAAGCCTGGATACAGTC...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGGGGTGCCGTGCGGGGTaGGAGCACGCCCGGCAAATT +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKGCRAG*EHARQI
Trigger: AATTTGCCGGGCGTGCTCTCACCCCGCACGGCACCC...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTGGGTGCCGTGCGGGGTaGGAGCACGCCCGGCAAATT +
Preference number: 4 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVIGCRAG*EHARQI
Trigger: AATTTGCCGGGCGTGCTCTCACCCCGCACGGCACCC...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp TTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTAACATCTTCGGGCTGAAGTaGTGGGATCCGAGGACTGAC +
Preference number: 4 (lower is better)
Translates to: FPTCNPSVSVFLSLWSTNIFGLK*WDPRTD
Trigger: GTCAGTCCTCGGATCCCATCACTTCAGCCCGAAGAT...GTTAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGATGCCAGCAGCTGTTaGCAATTGGGCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQDASSC*QLGWAT
Trigger: TGTTGCCCAGCCCAATTGTCAACAGCTGCTGGCATC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTTGCCTGTTCAAGTCTaGCCTGTCGATGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLLPVQV*PVDVLR
Trigger: TCTCAGCACATCGACAGGTCAGACTTGAACAGGCAA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR TCA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGTTGCCTGTTCAAGTCTaGCCTGTCGATGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HICQQHLGVVRIILSRALLPVQV*PVDVLR
Trigger: TCTCAGCACATCGACAGGTCAGACTTGAACAGGCAA...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTTGCCTGTTCAAGTCTaGCCTGTCGATGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFLPVQV*PVDVLR
Trigger: TCTCAGCACATCGACAGGTCAGACTTGAACAGGCAA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCATGCCACATGTCCCATaGTTCTCGTGGATTAAGGGC +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFMPHVP*FSWIKG
Trigger: GCCCTTAATCCACGAGAATCATGGGACATGTGGCAT...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTAGAGGCAATTGCTGCTaGTCTCGGATGAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLRGNCC*SRMNQG
Trigger: ACCCTGATTCATCCGAGATCAGCAGCAATTGCCTCT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp ACCACCTTCTCTGACTTGAATGGACACACTCTCTTTCCTACCTGTAACCCCAGTCGTAATCTTCGTGGGTaGCTGTGTCTGGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: TTFSDLNGHTLFPTCNPSRNLRG*LCLGGL
Trigger: TAAACCTCCCAGACACAGTCACCCACGAAGATTACG...ACTGGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp GTCCTCTTCTTTTGCATGTTTCTCCTTTGGTATTATAGGAACCGTGTCCTCCACGTGGGGTCGAGGCACTaGGACTCCTTTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: VLFFCMFLLWYYRNRVLHVGSRH*DSFLNQ
Trigger: TTGGTTCAGAAAGGAGTCTCAGTGCCTCGACCCCAC...GTGGAGGACACGGTTCCTATAATACCAAAGGAGAAACATGCAAAAGAAGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTGGGGTCGAGGCACTaGGACTCCTTTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQVGSRH*DSFLNQ
Trigger: TTGGTTCAGAAAGGAGTCTCAGTGCCTCGACCCCAC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp GGCTTGTGTTTCTCCAAATCTATCTGGCCCATTCCTAAATTCCCAAAAACCAGGGAGGCTGTCCACATCTaGACTGGACACGCATTCCAC +
Preference number: 4 (lower is better)
Translates to: GLCFSKSIWPIPKFPKTREAVHI*TGHAFH
Trigger: GTGGAATGCGTGTCCAGTTCAGATGTGGACAGCCTC...CCTGGTTTTTGGGAATTTAGGAATGGGCCAGATAGATTTGGAGAAACACAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTGGAACTTCTCGTCTaGTCCAGTAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLLELLV*SSRSLA
Trigger: TGCTAAGGACCTACTGGATCAGACGAGAAGTTCCAG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCTGGAACTTCTCGTCTaGTCCAGTAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFLELLV*SSRSLA
Trigger: TGCTAAGGACCTACTGGATCAGACGAGAAGTTCCAG...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTGTCACCATCTTCACTaGCCAGTGTCTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLCHHLH*PVSSPP
Trigger: TGGAGGAGAAGACACTGGGCAGTGAAGATGGTGACA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTAAATTCACTTTTCTCTaGTTCTCCCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLKFTFL*FSLGGS
Trigger: GGAGCCGCCCAGGGAGAAGCAGAGAAAAGTGAATTT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCCGGCAAATTCCAATaGAATTCCCTTAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLPGKFQ*NSLSRC
Trigger: GCAGCGACTAAGGGAATTCCATTGGAATTTGCCGGG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338947.9
ENST00000379705.8
ENST00000426868.6
CDS-3UTR CCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTCTTCTCCTCCAGCCTaGAAACTCATCGTACCAGCG +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKSSPPA*KLIVPA
Trigger: CGCTGGTACGATGAGTTTCCAGGCTGGAGGAGAAGA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTGACGATGGTTGGTGGTaGACCTTGCCTGTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSDDGWW*TLPVQV
Trigger: GACTTGAACAGGCAAGGTCCACCACCAACCATCGTC...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGCTCGACGATGGTTGGTaGTGGACCTTGCCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKLDDGW*WTLPVQ
Trigger: TTGAACAGGCAAGGTCCACCACCAACCATCGTCGAG...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATTACAGCGGACCTCGTaGGGTCGAGGCACTGAGACT +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVLQRTS*GRGTET
Trigger: AGTCTCAGTGCCTCGACCCCACGAGGTCCGCTGTAA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCCTCTAGGGATTTCTTaGCACTGGCATAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFPLGIS*HWHNLP
Trigger: AGGGAGATTATGCCAGTGTCAAGAAATCCCTAGAGG...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCTCTAGGGATTTCTTaGCACTGGCATAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLPLGIS*HWHNLP
Trigger: AGGGAGATTATGCCAGTGTCAAGAAATCCCTAGAGG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGATGCCAGCAGCTGTTaGCAATTGGGCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVDASSC*QLGWAT
Trigger: TGTTGCCCAGCCCAATTGTCAACAGCTGCTGGCATC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGATGCCACATGTCCCATaGTTCTCGTGGATTAAGGGC +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKMPHVP*FSWIKG
Trigger: GCCCTTAATCCACGAGAATCATGGGACATGTGGCAT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCATTTGCAGTAAACAGTaGGATCAGACGCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSICSKQ*DQTQRT
Trigger: AGTTCTCTGCGTCTGATCTCACTGTTTACTGCAAAT...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCGATGAGCCCAAATATTaGCCAAAACAGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFDEPKY*PKQGLQ
Trigger: CTGCAGTCCCTGTTTTGGTCAATATTTGGGCTCATC...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGATGAGCCCAAATATTaGCCAAAACAGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLDEPKY*PKQGLQ
Trigger: CTGCAGTCCCTGTTTTGGTCAATATTTGGGCTCATC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp ACCACCTTCTCTGACTTGAATGGACACACTCTCTTTCCTACCTGTAACCCCAGTGTGTCCAGATCCATTTaGTCAGGTACCAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: TTFSDLNGHTLFPTCNPSVSRSI*SGTRET
Trigger: AGTCTCTCTGGTACCTGATCAAATGGATCTGGACAC...ACTGGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGTGTCCAGATCCATTTaGTCAGGTACCAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLVSRSI*SGTRET
Trigger: AGTCTCTCTGGTACCTGATCAAATGGATCTGGACAC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGAGAGGCAATTGCTGCTaGTCTCGGATGAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKRGNCC*SRMNQG
Trigger: ACCCTGATTCATCCGAGATCAGCAGCAATTGCCTCT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGTCCTGCAGCCTGTTaGCGAGCAACTTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQGPAAC*RATSSE
Trigger: TTCAGAAGAAGTTGCTCGTCAACAGGCTGCAGGACC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp TTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTAACGGTCCTGCAGCCTGTTaGCGAGCAACTTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FPTCNPSVSVFLSLWSTNGPAAC*RATSSE
Trigger: TTCAGAAGAAGTTGCTCGTCAACAGGCTGCAGGACC...GTTAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR TCA 90 bp ACCACCTTCTCTGACTTGAATGGACACACTCTCTTTCCTACCTGTAACCCCAGTCCACCTTCTCTGACTTaGATGGACACACTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TTFSDLNGHTLFPTCNPSPPSLT*MDTLSF
Trigger: GAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGG...ACTGGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCACCTTCTCTGACTTaGATGGACACACTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLPPSLT*MDTLSF
Trigger: GAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGCGTAATCTTCGTGGGTaGCTGTGTCTGGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKRNLRG*LCLGGL
Trigger: TAAACCTCCCAGACACAGTCACCCACGAAGATTACG...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp GTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCACGTAATCGTGGGGTCGAGGCACTaGGACTCCTTTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: VYGKRFLLQVSQSCGHVIVGSRH*DSFLNQ
Trigger: TTGGTTCAGAAAGGAGTCTCAGTGCCTCGACCCCAC...GATTACGTGACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CATTGCTTATGTTATGTCTTTCAGAGGCAATTGCTGCTGATCTCGGATGAATCAAGTCTGGAGCGTGAGTaGCGGAGGCTGTCCACATCT +
Preference number: 4 (lower is better)
Translates to: HCLCYVFQRQLLLISDESSLERE*RRLSTS
Trigger: AGATGTGGACAGCCTCCGTCACTCACGCTCCAGACT...TGATTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGACATAACATAAGCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR TCA 90 bp AATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTGTTGAGTCTGGAGCGTaGGTGACGGAGGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: NTYVYGKRFLLQVSQSCGVESGA*VTEAVH
Trigger: GTGGACAGCCTCCGTCACTCACGCTCCAGACTCAAC...ACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAAGGCCTTGTAGATGTTaGGTCTGGAGCGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQRPCRC*VWSVSD
Trigger: GTCACTCACGCTCCAGACTCAACATCTACAAGGCCT...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTAAAAGGATCTTCGCTTaGCAGTGCAATGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLKRIFA*QCNERG
Trigger: CCCTCTCTCATTGCACTGTCAAGCGAAGATCCTTTT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCTATCCTTAGAGGGATaGGGTCTCTATAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFLSLEG*GLYREH
Trigger: ATGCTCCCTATAGAGACCGCATCCCTCTAAGGATAG...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp TTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGACTTGGGGATCGTACCAGCGAGATaGCAGCAGCTGTTGACAATT +
Preference number: 4 (lower is better)
Translates to: FLHKCVQIHLIRYQRDLGIVPAR*QQLLTI
Trigger: AATTGTCAACAGCTGCTGGCATCTCGCTGGTACGAT...CCCCAAGTCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTATCGTACCAGCGAGATaGCAGCAGCTGTTGACAATT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLIVPAR*QQLLTI
Trigger: AATTGTCAACAGCTGCTGGCATCTCGCTGGTACGAT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTTGGTGGTGGACCTTaGCTGTTCAAGTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQVGGGP*LFKSDL
Trigger: CAGGTCAGACTTGAACAGGCAAGGTCCACCACCAAC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGCCACCAGAGTGGGATaGCACATGTCCCATGATTCT +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQATRVG*HMSHDS
Trigger: AGAATCATGGGACATGTGGCATCCCACTCTGGTGGC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGAAATTCACTTTTCTCTaGTTCTCCCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKKFTFL*FSLGGS
Trigger: GGAGCCGCCCAGGGAGAAGCAGAGAAAAGTGAATTT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATCTCTCAAGTGGTCCTaGAGCCTGTTGACGAGCAAC +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQSLKWS*SLLTSN
Trigger: GTTGCTCGTCAACAGGCTGCAGGACCACTTGAGAGA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp TTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTAACTCTCTCAAGTGGTCCTaGAGCCTGTTGACGAGCAAC +
Preference number: 4 (lower is better)
Translates to: FPTCNPSVSVFLSLWSTNSLKWS*SLLTSN
Trigger: GTTGCTCGTCAACAGGCTGCAGGACCACTTGAGAGA...GTTAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp TTTCATCTGAGTCTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATCTCTCAAGTGGTCCTaGAGCCTGTTGACGAGCAAC +
Preference number: 4 (lower is better)
Translates to: FHLSLPNLKTPSRHSQIVSLKWS*SLLTSN
Trigger: GTTGCTCGTCAACAGGCTGCAGGACCACTTGAGAGA...TACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTCAGCAGCTCGCCTATaGTGTGTTCTTACCCCTATT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLSAARL*CVLTPI
Trigger: AATAGGGGTAAGAACACAGCATAGGCGAGCTGCTGA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625583.2
CDS-3UTR CCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGATGAACAGTCCAAGTaGGCTTTTGGGAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLDEQSK*AFGSYQ
Trigger: CTGATAGCTCCCAAAAGCCCACTTGGACTGTTCATC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGACGATGGTTGGTGGTaGACCTTGCCTGTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQDDGWW*TLPVQV
Trigger: GACTTGAACAGGCAAGGTCCACCACCAACCATCGTC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp GGCTTGTGTTTCTCCAAATCTATCTGGCCCATTCCTAAATTCCCAAAAACCAGGGACGATGGTTGGTGGTaGACCTTGCCTGTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: GLCFSKSIWPIPKFPKTRDDGWW*TLPVQV
Trigger: GACTTGAACAGGCAAGGTCCACCACCAACCATCGTC...CCTGGTTTTTGGGAATTTAGGAATGGGCCAGATAGATTTGGAGAAACACAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCATCCACTCGACGATaGTTGGTGGTGGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVSSTRR*LVVDLA
Trigger: GGCAAGGTCCACCACCAACCATCGTCGAGTGGATGA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp GTGGTGAAGGGAATGGCTCTGATGGACACATCACAGCTCCATCATGAGCTGTATTGTATGTCCCAAACATaGTGGCACCAACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: VVKGMALMDTSQLHHELYCMSQT*WHQQTQ
Trigger: CTGAGTTTGTTGGTGCCACCATGTTTGGGACATACA...ATACAGCTCATGATGGAGCTGTGATGTGTCCATCAGAGCCATTCCCTTCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGCAGCTGTTGACAATTaGGCTGGGCAACAAACTCTT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLAAVDN*AGQQTL
Trigger: AAGAGTTTGTTGCCCAGCCCAATTGTCAACAGCTGC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR TCA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGATCTTCGGGCTGAAGTaGTGGGATCCGAGGACTGAC +
Preference number: 4 (lower is better)
Translates to: KTGATSEGCKEQYINVNRIFGLK*WDPRTD
Trigger: GTCAGTCCTCGGATCCCATCACTTCAGCCCGAAGAT...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGATGAGCCCAAATATTaGCCAAAACAGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKDEPKY*PKQGLQ
Trigger: CTGCAGTCCCTGTTTTGGTCAATATTTGGGCTCATC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGTGTCCAGATCCATTTaGTCAGGTACCAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKVSRSI*SGTRET
Trigger: AGTCTCTCTGGTACCTGATCAAATGGATCTGGACAC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGCCACCTTCTCTGACTTaGATGGACACACTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKPPSLT*MDTLSF
Trigger: GAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGG...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp GGCTTGTGTTTCTCCAAATCTATCTGGCCCATTCCTAAATTCCCAAAAACCAGGCGTAATCTTCGTGGGTaGCTGTGTCTGGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: GLCFSKSIWPIPKFPKTRRNLRG*LCLGGL
Trigger: TAAACCTCCCAGACACAGTCACCCACGAAGATTACG...CCTGGTTTTTGGGAATTTAGGAATGGGCCAGATAGATTTGGAGAAACACAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CTTCCTCTTAGTAATCCCAGGACTTCAAAGCGGAAACTAGAAATGTCTTGCTTTGAGGCTGTCCACATCTaGACTGGACACGCATTCCAC +
Preference number: 4 (lower is better)
Translates to: LPLSNPRTSKRKLEMSCFEAVHI*TGHAFH
Trigger: GTGGAATGCGTGTCCAGTTCAGATGTGGACAGCCTC...AAAGCAAGACATTTCTAGTTTCCGCTTTGAAGTCCTGGGATTACTAAGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAAGGCCTTGTAGATGTTaGGTCTGGAGCGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVRPCRC*VWSVSD
Trigger: GTCACTCACGCTCCAGACTCAACATCTACAAGGCCT...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp ACAACTTACTTGGTATTGGTGATGTCTTCTCAAGTTATCAGCAGCTCGCCTCCCAAAAGGATCTTCGCTTaGCAGTGCAATGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TTYLVLVMSSQVISSSPPKRIFA*QCNERG
Trigger: CCCTCTCTCATTGCACTGTCAAGCGAAGATCCTTTT...GGGAGGCGAGCTGCTGATAACTTGAGAAGACATCACCAATACCAAGTAAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR TCA 90 bp GTGGTGAAGGGAATGGCTCTGATGGACACATCACAGCTCCATCATGAGCTGTATTTAACTGAAAGGCTGTaGGAAAAGGATCTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: VVKGMALMDTSQLHHELYLTERL*EKDLRL
Trigger: CAAGCGAAGATCCTTTTCTCACAGCCTTTCAGTTAA...ATACAGCTCATGATGGAGCTGTGATGTGTCCATCAGAGCCATTCCCTTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATTGTTTGCACTGCCGTaGCAGCTCTTCATACTCCGA +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQLFALP*QLFILR
Trigger: TCGGAGTATGAAGAGCTGTCACGGCAGTGCAAACAA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCGCAACAAACTCTTTTTaGCGGTACTTAATGGCCAAT +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSATNSF*RYLMAN
Trigger: ATTGGCCATTAAGTACCGTCAAAAAGAGTTTGTTGC...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp ACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTGAAGCTGCAACAAACTCTTTTTaGCGGTACTTAATGGCCAAT +
Preference number: 4 (lower is better)
Translates to: TNTHCSLRPGMLRSPREAATNSF*RYLMAN
Trigger: ATTGGCCATTAAGTACCGTCAAAAAGAGTTTGTTGC...AGCTTCACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR TCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCAAGAAGGGACTCTTATaGAGCATACCAAACTCATTC +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSKKGLL*SIPNSF
Trigger: GAATGAGTTTGGTATGCTTCATAAGAGTCCCTTCTT...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp GTGGTGAAGGGAATGGCTCTGATGGACACATCACAGCTCCATCATGAGCTGTATTTGACTTTGCTTCTTTaGGAACAGCATGGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: VVKGMALMDTSQLHHELYLTLLL*EQHGES
Trigger: AGACTCACCATGCTGTTCTCAAAGAAGCAAAGTCAA...ATACAGCTCATGATGGAGCTGTGATGTGTCCATCAGAGCCATTCCCTTCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGCTATCCTTAGAGGGATaGGGTCTCTATAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKLSLEG*GLYREH
Trigger: ATGCTCCCTATAGAGACCGCATCCCTCTAAGGATAG...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTACTATCCTTAGAGGGATaGGGTCTCTATAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVLSLEG*GLYREH
Trigger: ATGCTCCCTATAGAGACCGCATCCCTCTAAGGATAG...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGTTGGTGGTGGACCTTaGCTGTTCAAGTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVVGGGP*LFKSDL
Trigger: CAGGTCAGACTTGAACAGGCAAGGTCCACCACCAAC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGCCACCAGAGTGGGATaGCACATGTCCCATGATTCT +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVATRVG*HMSHDS
Trigger: AGAATCATGGGACATGTGGCATCCCACTCTGGTGGC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGCAAATTGTTTGCACTaGCGTGACAGCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLANCLH*RDSSSY
Trigger: GTATGAAGAGCTGTCACGGCAGTGCAAACAATTTGC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp TTTTGCATGTTTCTCCTTTGGTATTATAGGAACCGTGTCCTCCACCACCACCTTCCCGGCAAATTCCAATaGAATTCCCTTAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: FCMFLLWYYRNRVLHHHLPGKFQ*NSLSRC
Trigger: GCAGCGACTAAGGGAATTCCATTGGAATTTGCCGGG...AAGGTGGTGGTGGAGGACACGGTTCCTATAATACCAAAGGAGAAACATGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CCA 90 bp TTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCTTCTTCTCCTCCAGCCTaGAAACTCATCGTACCAGCG +
Preference number: 4 (lower is better)
Translates to: FEDSFEAFADCIVESLLPSSPPA*KLIVPA
Trigger: CGCTGGTACGATGAGTTTCCAGGCTGGAGGAGAAGA...AGGAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGACGATGGTTGGTGGTaGACCTTGCCTGTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVDDGWW*TLPVQV
Trigger: GACTTGAACAGGCAAGGTCCACCACCAACCATCGTC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp GTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCACGTAATCCTCGACGATGGTTGGTaGTGGACCTTGCCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: VYGKRFLLQVSQSCGHVILDDGW*WTLPVQ
Trigger: TTGAACAGGCAAGGTCCACCACCAACCATCGTCGAG...GATTACGTGACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTGTATGTCCCAAACATaGTGGCACCAACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLCMSQT*WHQQTQ
Trigger: CTGAGTTTGTTGGTGCCACCATGTTTGGGACATACA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTGTATGTCCCAAACATaGTGGCACCAACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFCMSQT*WHQQTQ
Trigger: CTGAGTTTGTTGGTGCCACCATGTTTGGGACATACA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp ACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATTACAGCGGACCTCGTaGGGTCGAGGCACTGAGACT +
Preference number: 4 (lower is better)
Translates to: TTENTYVYGKRFLLQVSQLQRTS*GRGTET
Trigger: AGTCTCAGTGCCTCGACCCCACGAGGTCCGCTGTAA...TTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGCAGCTGTTGACAATTaGGCTGGGCAACAAACTCTT +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKAAVDN*AGQQTL
Trigger: AAGAGTTTGTTGCCCAGCCCAATTGTCAACAGCTGC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATTGCCTGTTCAAGTCTaGCCTGTCGATGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVLPVQV*PVDVLR
Trigger: TCTCAGCACATCGACAGGTCAGACTTGAACAGGCAA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAATGCCACATGTCCCATaGTTCTCGTGGATTAAGGGC +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVMPHVP*FSWIKG
Trigger: GCCCTTAATCCACGAGAATCATGGGACATGTGGCAT...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCATTTGCAGTAAACAGTaGGATCAGACGCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFICSKQ*DQTQRT
Trigger: AGTTCTCTGCGTCTGATCTCACTGTTTACTGCAAAT...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTATTTGCAGTAAACAGTaGGATCAGACGCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLICSKQ*DQTQRT
Trigger: AGTTCTCTGCGTCTGATCTCACTGTTTACTGCAAAT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTGAACAACCAGAGAGATaGCATTGTATGTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLEQPER*HCMSQT
Trigger: TGTTTGGGACATACAATGTCATCTCTCTGGTTGTTC...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCGAACAACCAGAGAGATaGCATTGTATGTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFEQPER*HCMSQT
Trigger: TGTTTGGGACATACAATGTCATCTCTCTGGTTGTTC...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTGTCCAGATCCATTTaGTCAGGTACCAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQVSRSI*SGTRET
Trigger: AGTCTCTCTGGTACCTGATCAAATGGATCTGGACAC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAAGAGGCAATTGCTGCTaGTCTCGGATGAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVRGNCC*SRMNQG
Trigger: ACCCTGATTCATCCGAGATCAGCAGCAATTGCCTCT...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACGTAATCTTCGTGGGTaGCTGTGTCTGGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVRNLRG*LCLGGL
Trigger: TAAACCTCCCAGACACAGTCACCCACGAAGATTACG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CATCTTTTTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGACGTAATCTTCGTGGGTaGCTGTGTCTGGGAGGTTTA +
Preference number: 4 (lower is better)
Translates to: HLFLAQVCPDPFDQVPERRNLRG*LCLGGL
Trigger: TAAACCTCCCAGACACAGTCACCCACGAAGATTACG...TCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAAAAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp AGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTGGAGGCCTTGTAGATGTTaGGTCTGGAGCGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SFVRANFHSISAWSAISWRPCRC*VWSVSD
Trigger: GTCACTCACGCTCCAGACTCAACATCTACAAGGCCT...CCAACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp ACCACCTTCTCTGACTTGAATGGACACACTCTCTTTCCTACCTGTAACCCCAGTCTTCATACTCCGACTTaGATTCATTTTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: TTFSDLNGHTLFPTCNPSLHTPT*IHFPPC
Trigger: GCAAGGTGGAAAATGAATTCAAGTCGGAGTATGAAG...ACTGGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTTCATACTCCGACTTaGATTCATTTTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLLHTPT*IHFPPC
Trigger: GCAAGGTGGAAAATGAATTCAAGTCGGAGTATGAAG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp GTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCACGTAATCTTGTTTGCACTGCCGTaGCAGCTCTTCATACTCCGA +
Preference number: 4 (lower is better)
Translates to: VYGKRFLLQVSQSCGHVILFALP*QLFILR
Trigger: TCGGAGTATGAAGAGCTGTCACGGCAGTGCAAACAA...GATTACGTGACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTAGTGAAAAGTCCTTGGTaGGTAACCCTCTCTAAAGAC +
Preference number: 4 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVVKSPW*VTLSKD
Trigger: GTCTTTAGAGAGGGTTACTCACCAAGGACTTTTCAC...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAACTATCCTTAGAGGGATaGGGTCTCTATAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQLSLEG*GLYREH
Trigger: ATGCTCCCTATAGAGACCGCATCCCTCTAAGGATAG...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp TTTCATCTGAGTCTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTACTATCCTTAGAGGGATaGGGTCTCTATAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: FHLSLPNLKTPSRHSQIVLSLEG*GLYREH
Trigger: ATGCTCCCTATAGAGACCGCATCCCTCTAAGGATAG...TACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp TTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCTTGTCACCATCTTCACTaGCCAGTGTCTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FEDSFEAFADCIVESLLPCHHLH*PVSSPP
Trigger: TGGAGGAGAAGACACTGGGCAGTGAAGATGGTGACA...AGGAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATGTCACCATCTTCACTaGCCAGTGTCTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVCHHLH*PVSSPP
Trigger: TGGAGGAGAAGACACTGGGCAGTGAAGATGGTGACA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR GCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCGACCAAAACAGGGACTaGAGTGTCTCAAATAACGTT +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFDQNRD*SVSNNV
Trigger: AACGTTATTTGAGACACTGCAGTCCCTGTTTTGGTC...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp TGGTCTACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTTTTCCATTCTATATCTaGATGGTCAGCAATCAGTTG +
Preference number: 4 (lower is better)
Translates to: WSTNTHCSLRPGMLRSPRFPFYI*MVSNQL
Trigger: CAACTGATTGCTGACCATGCAGATATAGAATGGAAA...ACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGTAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTAGCATCTCTAATCATTaGAGCAACGTATCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLSISNH*SNVSLH
Trigger: GTGAAGCGATACGTTGCTGCAATGATTAGAGATGCT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTCTTTTTCTTGTCCTTaGTATTACCTTCGCTATCAC +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSSFSCP*YYLRYH
Trigger: GTGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGA...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGCCAGGGCAGAGCCATTaGTTATGTTATGTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKPGQSH*LCYVFQ
Trigger: CTGAAAGACATAACATAAGCAATGGCTCTGCCCTGG...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAAAATTCACTTTTCTCTaGTTCTCCCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVKFTFL*FSLGGS
Trigger: GGAGCCGCCCAGGGAGAAGCAGAGAAAAGTGAATTT...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp ACCACCTTCTCTGACTTGAATGGACACACTCTCTTTCCTACCTGTAACCCCAGTATTCATTTTCCACCTTaGTCAGTTCCTGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: TTFSDLNGHTLFPTCNPSIHFPP*SVPEVP
Trigger: GGGAACTTCAGGAACTGAGCAAGGTGGAAAATGAAT...ACTGGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTATTCATTTTCCACCTTaGTCAGTTCCTGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLIHFPP*SVPEVP
Trigger: GGGAACTTCAGGAACTGAGCAAGGTGGAAAATGAAT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGCAAATTGTTTGCACTaGCGTGACAGCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKANCLH*RDSSSY
Trigger: GTATGAAGAGCTGTCACGGCAGTGCAAACAATTTGC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCAGAAAACGATCGAAGCTaGAGCCCACGCAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLAENDRS*SPRSWH
Trigger: GTGCCAGCTGCGTGGGCTCCAGCTTCGATCGTTTTC...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGATGAACAGTCCAAGTaGGCTTTTGGGAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQDEQSK*AFGSYQ
Trigger: CTGATAGCTCCCAAAAGCCCACTTGGACTGTTCATC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CCA 90 bp TCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTGGTAAGAATTCCTCTGCCACCAGAGTaGGATGCCACATGTCCCATG +
Preference number: 4 (lower is better)
Translates to: SCKFPFYICMVSNQLVRIPLPPE*DATCPM
Trigger: CATGGGACATGTGGCATCCCACTCTGGTGGCAGAGG...AATTCTTACCAACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR CCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAGTATCACAATCTTGTaGTCACGTAATCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFSITIL*SRNLRG
Trigger: CCCACGAAGATTACGTGACCACAAGATTGTGATACT...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp AAAGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTTTACAGCGGACCTCGTaGGGTCGAGGCACTGAGACT +
Preference number: 4 (lower is better)
Translates to: KALFVQISILYLHGQQSVLQRTS*GRGTET
Trigger: AGTCTCAGTGCCTCGACCCCACGAGGTCCGCTGTAA...AACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTTTACAGGGCCACAATaGATGGTTCTTACTAGGTTG +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFFTGPQ*MVLTRL
Trigger: CAACCTAGTAAGAACCATCCATTGTGGCCCTGTAAA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACCTCTAGGGATTTCTTaGCACTGGCATAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVPLGIS*HWHNLP
Trigger: AGGGAGATTATGCCAGTGTCAAGAAATCCCTAGAGG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCAGATGCCAGCAGCTGTTaGCAATTGGGCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLADASSC*QLGWAT
Trigger: TGTTGCCCAGCCCAATTGTCAACAGCTGCTGGCATC...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGTGTCCAGATCCATTTaGTCAGGTACCAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVVSRSI*SGTRET
Trigger: AGTCTCTCTGGTACCTGATCAAATGGATCTGGACAC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGCTGCTGATCTCGGATaGATCAGGGTGGTTAAATCA +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVAADLG*IRVVKS
Trigger: TGATTTAACCACCCTGATTCATCCGAGATCAGCAGC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp GCAGTAAACAGTGAGATCAGACGCAGAGAACTGAAGATGTTTGCAATAGCAAATAGAGGCAATTGCTGCTaGTCTCGGATGAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: AVNSEIRRRELKMFAIANRGNCC*SRMNQG
Trigger: ACCCTGATTCATCCGAGATCAGCAGCAATTGCCTCT...ATTTGCTATTGCAAACATCTTCAGTTCTCTGCGTCTGATCTCACTGTTTACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTACGAGCAACTTCTTCTaGAACAGAGAAGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLTSNFF*NREDLV
Trigger: AACCAAATCTTCTCTGTTTCAGAAGAAGTTGCTCGT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCACGAGCAACTTCTTCTaGAACAGAGAAGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFTSNFF*NREDLV
Trigger: AACCAAATCTTCTCTGTTTCAGAAGAAGTTGCTCGT...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACCACCTTCTCTGACTTaGATGGACACACTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVPPSLT*MDTLSF
Trigger: GAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTTAACTGAAAGGCTGTaGGAAAAGGATCTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKLTERL*EKDLRL
Trigger: CAAGCGAAGATCCTTTTCTCACAGCCTTTCAGTTAA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTAGTTCCCAACTTAACTaGAAGGCTGTGAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSSSQLN*KAVRKG
Trigger: TCCTTTTCTCACAGCCTTTCAGTTAAGTTGGGAACT...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGAGTTCCCAACTTAACTaGAAGGCTGTGAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKSSQLN*KAVRKG
Trigger: TCCTTTTCTCACAGCCTTTCAGTTAAGTTGGGAACT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTACTTCATACTCCGACTTaGATTCATTTTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVLHTPT*IHFPPC
Trigger: GCAAGGTGGAAAATGAATTCAAGTCGGAGTATGAAG...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CTTCCTCTTAGTAATCCCAGGACTTCAAAGCGGAAACTAGAAATGTCTTGCTTTTTGTTTGCACTGCCGTaGCAGCTCTTCATACTCCGA +
Preference number: 4 (lower is better)
Translates to: LPLSNPRTSKRKLEMSCFLFALP*QLFILR
Trigger: TCGGAGTATGAAGAGCTGTCACGGCAGTGCAAACAA...AAAGCAAGACATTTCTAGTTTCCGCTTTGAAGTCCTGGGATTACTAAGAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp AATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCTGGAACTTCTCGTCTaGTCCAGTAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: NLKTPSRHSQIVLWKVCFLELLV*SSRSLA
Trigger: TGCTAAGGACCTACTGGATCAGACGAGAAGTTCCAG...GAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTAGTTATTGGTGTTGCTTaGCGGAACAGAGAGAATTTG +
Preference number: 4 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVVIGVA*RNRENL
Trigger: CAAATTCTCTCTGTTCCGTCAAGCAACACCAATAAC...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCGTCTCTGCAAAGTTaGAATCTTCGGGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVSSLQS*NLRAEV
Trigger: CACTTCAGCCCGAAGATTGCAACTTTGCAGAGACGA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338947.9
ENST00000379705.8
ENST00000426868.6
CDS-3UTR GCA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTCTGAGCCATGTTTCATaGCATGCTATTTCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSLSHVS*HAISSS
Trigger: AGACGAAGAAATAGCATGGCATGAAACATGGCTCAG...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR GCA 90 bp TTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCTCTATCCTTAGAGGGATaGGGTCTCTATAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: FEDSFEAFADCIVESLLPLSLEG*GLYREH
Trigger: ATGCTCCCTATAGAGACCGCATCCCTCTAAGGATAG...AGGAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAATCGTACCAGCGAGATaGCAGCAGCTGTTGACAATT +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVIVPAR*QQLLTI
Trigger: AATTGTCAACAGCTGCTGGCATCTCGCTGGTACGAT...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCACATCTTATGCCTTTaGAGGTTAACCCTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLHILCL*RLTLSF
Trigger: AAACGAAAGGGTTAACCTGCAAAGGCATAAGATGTG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp TGGTCTACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTAGTAAATTCATGCTGTaGTTTGACATTGGTCACATA +
Preference number: 4 (lower is better)
Translates to: WSTNTHCSLRPGMLRSPRSKFML*FDIGHI
Trigger: TATGTGACCAATGTCAAAGCACAGCATGAATTTACT...ACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGTAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp CTTGGGGCTCGGGATGACATTGAAGGGAGTAGGCAGAGTACCTCCTTCTTCAAAAGTAAATTCATGCTGTaGTTTGACATTGGTCACATA +
Preference number: 4 (lower is better)
Translates to: LGARDDIEGSRQSTSFFKSKFML*FDIGHI
Trigger: TATGTGACCAATGTCAAAGCACAGCATGAATTTACT...TTTGAAGAAGGAGGTACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTAAGCATCTCTAATCATTaGAGCAACGTATCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVSISNH*SNVSLH
Trigger: GTGAAGCGATACGTTGCTGCAATGATTAGAGATGCT...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GGCTTGTGTTTCTCCAAATCTATCTGGCCCATTCCTAAATTCCCAAAAACCAGGCCAGGGCAGAGCCATTaGTTATGTTATGTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GLCFSKSIWPIPKFPKTRPGQSH*LCYVFQ
Trigger: CTGAAAGACATAACATAAGCAATGGCTCTGCCCTGG...CCTGGTTTTTGGGAATTTAGGAATGGGCCAGATAGATTTGGAGAAACACAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp CTCTTTTCATCTGAGTCTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATATTCATTTTCCACCTTaGTCAGTTCCTGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LFSSESAEFEDSFEAFADIHFPP*SVPEVP
Trigger: GGGAACTTCAGGAACTGAGCAAGGTGGAAAATGAAT...ATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTAAGGAGGGTCTTACTTaGTCCAAATACATTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLKEGLT*SKYIPL
Trigger: TAGAGGAATGTATTTGGAGCAAGTAAGACCCTCCTT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGCCCGGCAAATTCCAATaGAATTCCCTTAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KTGATSEGCKEQYINVNRPGKFQ*NSLSRC
Trigger: GCAGCGACTAAGGGAATTCCATTGGAATTTGCCGGG...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp CATCTTTTTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGAGATGAACAGTCCAAGTaGGCTTTTGGGAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: HLFLAQVCPDPFDQVPERDEQSK*AFGSYQ
Trigger: CTGATAGCTCCCAAAAGCCCACTTGGACTGTTCATC...TCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAAAAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATTCATCCACTCGACGATaGTTGGTGGTGGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: GNEKLSAITLFSLGPMINSSTRR*LVVDLA
Trigger: GGCAAGGTCCACCACCAACCATCGTCGAGTGGATGA...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTCCTCTGCCACCAGAGTaGGATGCCACATGTCCCATG +
Preference number: 4 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVIPLPPE*DATCPM
Trigger: CATGGGACATGTGGCATCCCACTCTGGTGGCAGAGG...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATGTATGTCCCAAACATaGTGGCACCAACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQCMSQT*WHQQTQ
Trigger: CTGAGTTTGTTGGTGCCACCATGTTTGGGACATACA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp TTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTAACTGTATGTCCCAAACATaGTGGCACCAACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: FPTCNPSVSVFLSLWSTNCMSQT*WHQQTQ
Trigger: CTGAGTTTGTTGGTGCCACCATGTTTGGGACATACA...GTTAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CCA 90 bp GTGGTGAAGGGAATGGCTCTGATGGACACATCACAGCTCCATCATGAGCTGTATTCGCAGATTGTATTGTaGAAAGTTTGCTTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: VVKGMALMDTSQLHHELYSQIVL*KVCFLL
Trigger: TAAGAGGAAGCAAACTTTCCACAATACAATCTGCGA...ATACAGCTCATGATGGAGCTGTGATGTGTCCATCAGAGCCATTCCCTTCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCGTATTCCTTTCTCTATaGTCTACTAACACACATTGT +
Preference number: 4 (lower is better)
Translates to: PPPRALRKIRMCMVNASSVFLSL*STNTHC
Trigger: ACAATGTGTGTTAGTAGACCATAGAGAAAGGAATAC...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTGCATGTTTCTCCTTTaGTATTATAGGAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLCMFLL*YYRNRV
Trigger: GACACGGTTCCTATAATACCAAAGGAGAAACATGCA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGAGTATCACAATCTTGTaGTCACGTAATCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKSITIL*SRNLRG
Trigger: CCCACGAAGATTACGTGACCACAAGATTGTGATACT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGGCTGCCAAAATGATTaGTGTAATGTCTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKGCQND*CNVWSE
Trigger: TTCACTCCAGACATTACACCAATCATTTTGGCAGCC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
3UTR CAA 72 bp ATATTTACAGGGCCACAATGGATGGTTCTTACTAGGTaGAGTTTTAAGGACACTGAGCATGGAAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IFTGPQWMVLTR*SFKDTEHGRQL
Trigger: CAGCTGCCTTCCATGCTCAGTGTCCTTAAAACTCAACCTAGTAAGAACCATCCATTGTGGCCCTGTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR CAA 72 bp GAGGAAATTAACGGTTTTGCTACTGGTGAATTTGACTaGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGT +
Preference number: 4 (lower is better)
Translates to: EEINGFATGEFD*QRRLHCQPSNG
Trigger: ACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTCACCAGTAGCAAAACCGTTAATTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR CAA 72 bp CTTCGCTATCACTCTTTTCATCTGAGTCTGCCGAATTaGAAGACTCCTTCGAGGCATTCGCAGATTGTATTG +
Preference number: 4 (lower is better)
Translates to: LRYHSFHLSLPN*KTPSRHSQIVL
Trigger: CAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAAAGAGTGATAGCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
3UTR CAA 72 bp CAGTTGAATATTTCTCTCAAGTGGTCCTGCAGCCTGTaGACGAGCAACTTCTTCGCTATCACTCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: QLNISLKWSCSL*TSNFFAITLFI
Trigger: GATGAAAAGAGTGATAGCGAAGAAGTTGCTCGTCAACAGGCTGCAGGACCACTTGAGAGAAATATTCAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR TCA 90 bp AGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTGGCCTCTAGGGATTTCTTaGCACTGGCATAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: SFVRANFHSISAWSAISWPLGIS*HWHNLP
Trigger: AGGGAGATTATGCCAGTGTCAAGAAATCCCTAGAGG...CCAACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTTAAGAGTAGTTCGATaGGCTCCAAGTTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLLRVVR*APSSHF
Trigger: AAAATGAGAACTTGGAGCTCATCGAACTACTCTTAA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp TTTTGCATGTTTCTCCTTTGGTATTATAGGAACCGTGTCCTCCACCACCACCTTATTTGCAGTAAACAGTaGGATCAGACGCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: FCMFLLWYYRNRVLHHHLICSKQ*DQTQRT
Trigger: AGTTCTCTGCGTCTGATCTCACTGTTTACTGCAAAT...AAGGTGGTGGTGGAGGACACGGTTCCTATAATACCAAAGGAGAAACATGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAATTTGCAGTAAACAGTaGGATCAGACGCAGAGAACT +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQICSKQ*DQTQRT
Trigger: AGTTCTCTGCGTCTGATCTCACTGTTTACTGCAAAT...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp AGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTGGGATGAGCCCAAATATTaGCCAAAACAGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: SFVRANFHSISAWSAISWDEPKY*PKQGLQ
Trigger: CTGCAGTCCCTGTTTTGGTCAATATTTGGGCTCATC...CCAACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGAACAACCAGAGAGATaGCATTGTATGTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQEQPER*HCMSQT
Trigger: TGTTTGGGACATACAATGTCATCTCTCTGGTTGTTC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp TTTCATCTGAGTCTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTAGAACAACCAGAGAGATaGCATTGTATGTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: FHLSLPNLKTPSRHSQIVEQPER*HCMSQT
Trigger: TGTTTGGGACATACAATGTCATCTCTCTGGTTGTTC...TACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCAGGTCCTGCAGCCTGTTaGCGAGCAACTTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLAGPAAC*RATSSE
Trigger: TTCAGAAGAAGTTGCTCGTCAACAGGCTGCAGGACC...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAACCTCGAGATTCCAGTTaGATATTTCTCTCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQPRDSS*IFLSSG
Trigger: ACCACTTGAGAGAAATATTCAACTGGAATCTCGAGG...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp TCTTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTACCTCGAGATTCCAGTTaGATATTTCTCTCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SFLPVTPVCPYSFLYGLLPRDSS*IFLSSG
Trigger: ACCACTTGAGAGAAATATTCAACTGGAATCTCGAGG...TAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp AATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCCACCTTCTCTGACTTaGATGGACACACTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: NLKTPSRHSQIVLWKVCFPPSLT*MDTLSF
Trigger: GAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGG...GAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTCACTTTGTTCTTCTATaGGACTATTGTCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSHFVLL*DYCHLG
Trigger: ACCGAGATGACAATAGTCTCATAGAAGAACAAAGTG...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGCAACAAACTCTTTTTaGCGGTACTTAATGGCCAAT +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKATNSF*RYLMAN
Trigger: ATTGGCCATTAAGTACCGTCAAAAAGAGTTTGTTGC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR TCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTATAAAGATTACTGGTaGAAAGAGGAGACTGCTAGT +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFYKDYW*KEETAS
Trigger: ACTAGCAGTCTCCTCTTTTCACCAGTAATCTTTATA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGATCACATGCAATTTCTaGGGTTCGCAGAGTAATTTT +
Preference number: 4 (lower is better)
Translates to: HICQQHLGVVRIILSRALITCNF*GSQSNF
Trigger: AAAATTACTCTGCGAACCTCAGAAATTGCATGTGAT...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTACTGTGGATAGAAATATaGATAGAAACGAACACCCTG +
Preference number: 4 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVLWIEI*IETNTL
Trigger: CAGGGTGTTCGTTTCTATTCATATTTCTATCCACAG...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCAGTTGGTGGTGGACCTTaGCTGTTCAAGTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLAVGGGP*LFKSDL
Trigger: CAGGTCAGACTTGAACAGGCAAGGTCCACCACCAAC...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGACCAAAACAGGGACTaGAGTGTCTCAAATAACGTT +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQDQNRD*SVSNNV
Trigger: AACGTTATTTGAGACACTGCAGTCCCTGTTTTGGTC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAAGCATCTCTAATCATTaGAGCAACGTATCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQSISNH*SNVSLH
Trigger: GTGAAGCGATACGTTGCTGCAATGATTAGAGATGCT...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGTCTTTTTCTTGTCCTTaGTATTACCTTCGCTATCAC +
Preference number: 4 (lower is better)
Translates to: HICQQHLGVVRIILSRALSFSCP*YYLRYH
Trigger: GTGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGA...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACCAGGGCAGAGCCATTaGTTATGTTATGTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVPGQSH*LCYVFQ
Trigger: CTGAAAGACATAACATAAGCAATGGCTCTGCCCTGG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp TTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGACTTGGGGGTGAATTCAGAGAACTaGTTATCAAGGAGTATAGGA +
Preference number: 4 (lower is better)
Translates to: FLHKCVQIHLIRYQRDLGVNSEN*LSRSIG
Trigger: TCCTATACTCCTTGATAAGCAGTTCTCTGAATTCAC...CCCCAAGTCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp GTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCACGTAATCGCAAATTGTTTGCACTaGCGTGACAGCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: VYGKRFLLQVSQSCGHVIANCLH*RDSSSY
Trigger: GTATGAAGAGCTGTCACGGCAGTGCAAACAATTTGC...GATTACGTGACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGGAAAGGCAGTTACAATaGAGTGGTGAAGGGAATGGC +
Preference number: 4 (lower is better)
Translates to: KTGATSEGCKEQYINVNRERQLQ*SGEGNG
Trigger: GCCATTCCCTTCACCACTGCATTGTAACTGCCTTTC...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTATACTGTTATTGGTGTTaGTTGACGGAACAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVYCYWC*LTEQRE
Trigger: TTCTCTCTGTTCCGTCAAGCAACACCAATAACAGTA...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp TTTTGCATGTTTCTCCTTTGGTATTATAGGAACCGTGTCCTCCACCACCACCTTGACCAAAACAGGGACTaGAGTGTCTCAAATAACCTT +
Preference number: 4 (lower is better)
Translates to: FCMFLLWYYRNRVLHHHLDQNRD*SVSNNL
Trigger: AAGGTTATTTGAGACACTGCAGTCCCTGTTTTGGTC...AAGGTGGTGGTGGAGGACACGGTTCCTATAATACCAAAGGAGAAACATGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCATCTTCTCCTCCAGCCTaGAAACTCATCGTACCAGCG +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLASSPPA*KLIVPA
Trigger: CGCTGGTACGATGAGTTTCCAGGCTGGAGGAGAAGA...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATGTATGTCCCAAACATaGTGGCACCAACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVCMSQT*WHQQTQ
Trigger: CTGAGTTTGTTGGTGCCACCATGTTTGGGACATACA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTCGCAGATTGTATTGTaGAAAGTTTGCTTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFSQIVL*KVCFLL
Trigger: TAAGAGGAAGCAAACTTTCCACAATACAATCTGCGA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTGCATGTTTCTCCTTTaGTATTATAGGAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKCMFLL*YYRNRV
Trigger: GACACGGTTCCTATAATACCAAAGGAGAAACATGCA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAAGTATCACAATCTTGTaGTCACGTAATCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQSITIL*SRNLRG
Trigger: CCCACGAAGATTACGTGACCACAAGATTGTGATACT...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGCTGCCAAAATGATTaGTGTAATGTCTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQGCQND*CNVWSE
Trigger: TTCACTCCAGACATTACACCAATCATTTTGGCAGCC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGGCAGCTGTTGACAATTaGGCTGGGCAACAAACTCTT +
Preference number: 4 (lower is better)
Translates to: KTGATSEGCKEQYINVNRAAVDN*AGQQTL
Trigger: AAGAGTTTGTTGCCCAGCCCAATTGTCAACAGCTGC...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTTAAGAGTAGTTCGATaGGCTCCAAGTTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKLRVVR*APSSHF
Trigger: AAAATGAGAACTTGGAGCTCATCGAACTACTCTTAA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTATGCCACATGTCCCATaGTTCTCGTGGATTAAGGGC +
Preference number: 4 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMIMPHVP*FSWIKG
Trigger: GCCCTTAATCCACGAGAATCATGGGACATGTGGCAT...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAACGAGCAACTTCTTCTaGAACAGAGAAGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQTSNFF*NREDLV
Trigger: AACCAAATCTTCTCTGTTTCAGAAGAAGTTGCTCGT...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCATTGTTTGCACTGCCGTaGCAGCTCTTCATACTCCGA +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLALFALP*QLFILR
Trigger: TCGGAGTATGAAGAGCTGTCACGGCAGTGCAAACAA...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAACACTTTGTTCTTCTATaGGACTATTGTCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQHFVLL*DYCHLG
Trigger: ACCGAGATGACAATAGTCTCATAGAAGAACAAAGTG...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTTAGATATGACTCCATaGGAAGAAGACTTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKLDMTP*EEDLFA
Trigger: AGCAAACAAGTCTTCTTCTCATGGAGTCATATCTAA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGACTTCTTTTACTTACTaGAAGGAAACCCTGGAACAA +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKTSFTY*KETLEQ
Trigger: TTGTTCCAGGGTTTCCTTTCAGTAAGTAAAAGAAGT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATGGTTCTTACTAGGTTaGGTTTTAAGGACACTGAGC +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVWFLLG*VLRTLS
Trigger: GCTCAGTGTCCTTAAAACTCAACCTAGTAAGAACCA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGAGCCTAGTAACGGTGTaGCTGTATCCAGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKSLVTV*LYPGLV
Trigger: GACCAAGCCTGGATACAGTCACACCGTTACTAGGCT...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATATGAAGCCTCTTTTTaGCGGTACTTAATGGCCAAT +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQYEASF*RYLMAN
Trigger: ATTGGCCATTAAGTACCGTCAAAAAGAGGCTTCATA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACTATTTCTTCGTCTCTaGAAAGTTGCAATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVLFLRL*KVAIFG
Trigger: CCCGAAGATTGCAACTTTGCAGAGACGAAGAAATAG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338947.9
ENST00000379705.8
ENST00000426868.6
CDS-3UTR GCA 90 bp TCTCATCTTTTTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGCCATGTTTCATGCCATaGTATTTCTTCGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SHLFLAQVCPDPFDQVPEPCFMP*YFFVSA
Trigger: TGCAGAGACGAAGAAATAGCATGGCATGAAACATGG...CTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAAAAAGATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR GCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCATGTCACCATCTTCACTaGCCAGTGTCTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLACHHLH*PVSSPP
Trigger: TGGAGGAGAAGACACTGGGCAGTGAAGATGGTGACA...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp AAGTATTTCAAGTTGCTGTCTACGTCAAGGCAAGAAAGTGAGTATGTTTTTGCATGTCACCATCTTCACTaGCCAGTGTCTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KYFKLLSTSRQESEYVFACHHLH*PVSSPP
Trigger: TGGAGGAGAAGACACTGGGCAGTGAAGATGGTGACA...TGCAAAAACATACTCACTTTCTTGCCTTGACGTAGACAGCAACTTGAAATACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp TATATGAATAGAAACTTCAAAATGTCCAGGAGCATTCTTCCCAGAGATATTTGCGCCACCAGAGTGGGATaGCACATGTCCCATGATTCT +
Preference number: 4 (lower is better)
Translates to: YMNRNFKMSRSILPRDICATRVG*HMSHDS
Trigger: AGAATCATGGGACATGTGGCATCCCACTCTGGTGGC...GCAAATATCTCTGGGAAGAATGCTCCTGGACATTTTGAAGTTTCTATTCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR GCA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAGTAAATTCATGCTGTaGTTTGACATTGGTCACATA +
Preference number: 4 (lower is better)
Translates to: PPRALRKIRMCMVNASSFSKFML*FDIGHI
Trigger: TATGTGACCAATGTCAAAGCACAGCATGAATTTACT...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGAGTAAATTCATGCTGTaGTTTGACATTGGTCACATA +
Preference number: 4 (lower is better)
Translates to: HICQQHLGVVRIILSRALSKFML*FDIGHI
Trigger: TATGTGACCAATGTCAAAGCACAGCATGAATTTACT...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCACGTAATCAGCATCTCTAATCATTaGAGCAACGTATCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VYGKRFLLQVSQSCGHVISISNH*SNVSLH
Trigger: GTGAAGCGATACGTTGCTGCAATGATTAGAGATGCT...GATTACGTGACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCAAAATTCACTTTTCTCTaGTTCTCCCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLAKFTFL*FSLGGS
Trigger: GGAGCCGCCCAGGGAGAAGCAGAGAAAAGTGAATTT...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp AAAGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTAAATTCACTTTTCTCTaGTTCTCCCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KALFVQISILYLHGQQSVKFTFL*FSLGGS
Trigger: GGAGCCGCCCAGGGAGAAGCAGAGAAAAGTGAATTT...AACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR GCA 90 bp ACAACTTACTTGGTATTGGTGATGTCTTCTCAAGTTATCAGCAGCTCGCCTCCCGTGAATTCAGAGAACTaGTTATCAAGGAGTATAGGA +
Preference number: 4 (lower is better)
Translates to: TTYLVLVMSSQVISSSPPVNSEN*LSRSIG
Trigger: TCCTATACTCCTTGATAAGCAGTTCTCTGAATTCAC...GGGAGGCGAGCTGCTGATAACTTGAGAAGACATCACCAATACCAAGTAAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR GCA 90 bp GCAGTAAACAGTGAGATCAGACGCAGAGAACTGAAGATGTTTGCAATAGCAAATGCAAATTGTTTGCACTaGCGTGACAGCTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: AVNSEIRRRELKMFAIANANCLH*RDSSSY
Trigger: GTATGAAGAGCTGTCACGGCAGTGCAAACAATTTGC...ATTTGCTATTGCAAACATCTTCAGTTCTCTGCGTCTGATCTCACTGTTTACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR CCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATGCATGTTTCTCCTTTaGTATTATAGGAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQCMFLL*YYRNRV
Trigger: GACACGGTTCCTATAATACCAAAGGAGAAACATGCA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGTCTGTCAGCAACATCTaGGGGTTGTTAGAATCATCC +
Preference number: 4 (lower is better)
Translates to: KTGATSEGCKEQYINVNRSVSNI*GLLESS
Trigger: GGATGATTCTAACAACCCCCAGATGTTGCTGACAGA...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTCCTCTAGGGATTTCTTaGCACTGGCATAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMIPLGIS*HWHNLP
Trigger: AGGGAGATTATGCCAGTGTCAAGAAATCCCTAGAGG...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATTAAGAGTAGTTCGATaGGCTCCAAGTTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQLRVVR*APSSHF
Trigger: AAAATGAGAACTTGGAGCTCATCGAACTACTCTTAA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR TCA 90 bp TCTTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTATTAAGAGTAGTTCGATaGGCTCCAAGTTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: SFLPVTPVCPYSFLYGLLLRVVR*APSSHF
Trigger: AAAATGAGAACTTGGAGCTCATCGAACTACTCTTAA...TAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp TCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTGGTAAGAATTGATGAGCCCAAATATTaGCCAAAACAGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: SCKFPFYICMVSNQLVRIDEPKY*PKQGLQ
Trigger: CTGCAGTCCCTGTTTTGGTCAATATTTGGGCTCATC...AATTCTTACCAACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp GCAGTAAACAGTGAGATCAGACGCAGAGAACTGAAGATGTTTGCAATAGCAAATGAACAACCAGAGAGATaGCATTGTATGTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: AVNSEIRRRELKMFAIANEQPER*HCMSQT
Trigger: TGTTTGGGACATACAATGTCATCTCTCTGGTTGTTC...ATTTGCTATTGCAAACATCTTCAGTTCTCTGCGTCTGATCTCACTGTTTACTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR TCA 90 bp AGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTGGAGTTCCCAACTTAACTaGAAGGCTGTGAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SFVRANFHSISAWSAISWSSQLN*KAVRKG
Trigger: TCCTTTTCTCACAGCCTTTCAGTTAAGTTGGGAACT...CCAACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp AATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCTTCATACTCCGACTTaGATTCATTTTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: NLKTPSRHSQIVLWKVCFLHTPT*IHFPPC
Trigger: GCAAGGTGGAAAATGAATTCAAGTCGGAGTATGAAG...GAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAAAATACAAATGTTCCTaGGCAGCACTGTCCAATAGA +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVKYKCS*AALSNR
Trigger: TCTATTGGACAGTGCTGCTCAGGAACATTTGTATTT...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATTCGTCTCTGCAAAGTTaGAATCTTCGGGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: GNEKLSAITLFSLGPMINSSLQS*NLRAEV
Trigger: CACTTCAGCCCGAAGATTGCAACTTTGCAGAGACGA...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCAATCGTACCAGCGAGATaGCAGCAGCTGTTGACAATT +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLAIVPAR*QQLLTI
Trigger: AATTGTCAACAGCTGCTGGCATCTCGCTGGTACGAT...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACACATCTTATGCCTTTaGAGGTTAACCCTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVHILCL*RLTLSF
Trigger: AAACGAAAGGGTTAACCTGCAAAGGCATAAGATGTG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGAGTAAATTCATGCTGTaGTTTGACATTGGTCACATA +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKSKFML*FDIGHI
Trigger: TATGTGACCAATGTCAAAGCACAGCATGAATTTACT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATTTCCATTCTATATCTaGATGGTCAGCAATCAGTTG +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQFPFYI*MVSNQL
Trigger: CAACTGATTGCTGACCATGCAGATATAGAATGGAAA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGCCAAAGCTTTGTTCGTaGAAATTTCCATTCTATATC +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKPKLCS*KFPFYI
Trigger: GATATAGAATGGAAATTTGCACGAACAAAGCTTTGG...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATCTTTTTCTTGTCCTTaGTATTACCTTCGCTATCAC +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQSFSCP*YYLRYH
Trigger: GTGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTGAATTCAGAGAACTaGTTATCAAGGAGTATAGGA +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQVNSEN*LSRSIG
Trigger: TCCTATACTCCTTGATAAGCAGTTCTCTGAATTCAC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGATTCATTTTCCACCTTaGTCAGTTCCTGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: KTGATSEGCKEQYINVNRIHFPP*SVPEVP
Trigger: GGGAACTTCAGGAACTGAGCAAGGTGGAAAATGAAT...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATCGCAGATTGTATTGTaGAAAGTTTGCTTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQSQIVL*KVCFLL
Trigger: TAAGAGGAAGCAAACTTTCCACAATACAATCTGCGA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGTATTCCTTTCTCTATaGTCTACTAACACACATTGT +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKVFLSL*STNTHC
Trigger: ACAATGTGTGTTAGTAGACCATAGAGAAAGGAATAC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTAGTATTCCTTTCTCTATaGTCTACTAACACACATTGT +
Preference number: 4 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVVFLSL*STNTHC
Trigger: ACAATGTGTGTTAGTAGACCATAGAGAAAGGAATAC...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATGCATGTTTCTCCTTTaGTATTATAGGAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVCMFLL*YYRNRV
Trigger: GACACGGTTCCTATAATACCAAAGGAGAAACATGCA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp AATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCAGTATCACAATCTTGTaGTCACGTAATCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: NLKTPSRHSQIVLWKVCFSITIL*SRNLRG
Trigger: CCCACGAAGATTACGTGACCACAAGATTGTGATACT...GAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CCA 90 bp CATTGCTTATGTTATGTCTTTCAGAGGCAATTGCTGCTGATCTCGGATGAATCAAGTATCACAATCTTGTaGTCACGTAATCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: HCLCYVFQRQLLLISDESSITIL*SRNLRG
Trigger: CCCACGAAGATTACGTGACCACAAGATTGTGATACT...TGATTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGACATAACATAAGCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR CCA 90 bp CTTCCTCTTAGTAATCCCAGGACTTCAAAGCGGAAACTAGAAATGTCTTGCTTTGGCTGCCAAAATGATTaGTGTAATGTCTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LPLSNPRTSKRKLEMSCFGCQND*CNVWSE
Trigger: TTCACTCCAGACATTACACCAATCATTTTGGCAGCC...AAAGCAAGACATTTCTAGTTTCCGCTTTGAAGTCCTGGGATTACTAAGAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CCA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGACAGATTTCAAAACTTaGTGGCCTCTCTTCAATAAA +
Preference number: 4 (lower is better)
Translates to: PRALRKIRMCMVNASSFKTDFKT*WPLFNK
Trigger: TTTATTGAAGAGAGGCCACCAAGTTTTGAAATCTGT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGGTGTCCAGATCCATTTaGTCAGGTACCAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKVSRSI*SGTRET
Trigger: AGTCTCTCTGGTACCTGATCAAATGGATCTGGACAC...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGGCTGCTGATCTCGGATaGATCAGGGTGGTTAAATCA +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKAADLG*IRVVKS
Trigger: TGATTTAACCACCCTGATTCATCCGAGATCAGCAGC...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTGCTGCTGATCTCGGATaGATCAGGGTGGTTAAATCA +
Preference number: 4 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVIAADLG*IRVVKS
Trigger: TGATTTAACCACCCTGATTCATCCGAGATCAGCAGC...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp ACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAACCTCGAGATTCCAGTTaGATATTTCTCTCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: TTENTYVYGKRFLLQVSQPRDSS*IFLSSG
Trigger: ACCACTTGAGAGAAATATTCAACTGGAATCTCGAGG...TTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTAAAAGGATCTTCGCTTaGCAGTGCAATGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVIKRIFA*QCNERG
Trigger: CCCTCTCTCATTGCACTGTCAAGCGAAGATCCTTTT...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp AATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTTTAACTGAAAGGCTGTaGGAAAAGGATCTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: NTYVYGKRFLLQVSQSCGLTERL*EKDLRL
Trigger: CAAGCGAAGATCCTTTTCTCACAGCCTTTCAGTTAA...ACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp GCAGTAAACAGTGAGATCAGACGCAGAGAACTGAAGATGTTTGCAATAGCAAATCACTTTGTTCTTCTATaGGACTATTGTCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: AVNSEIRRRELKMFAIANHFVLL*DYCHLG
Trigger: ACCGAGATGACAATAGTCTCATAGAAGAACAAAGTG...ATTTGCTATTGCAAACATCTTCAGTTCTCTGCGTCTGATCTCACTGTTTACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR GCA 90 bp CTTCCTCTTAGTAATCCCAGGACTTCAAAGCGGAAACTAGAAATGTCTTGCTTTCACATCTTATGCCTTTaGAGGTTAACCCTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: LPLSNPRTSKRKLEMSCFHILCL*RLTLSF
Trigger: AAACGAAAGGGTTAACCTGCAAAGGCATAAGATGTG...AAAGCAAGACATTTCTAGTTTCCGCTTTGAAGTCCTGGGATTACTAAGAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR GCA 90 bp AATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTGACCAAAACAGGGACTaGAGTGTCTCAAATAACGTT +
Preference number: 4 (lower is better)
Translates to: NTYVYGKRFLLQVSQSCGDQNRD*SVSNNV
Trigger: AACGTTATTTGAGACACTGCAGTCCCTGTTTTGGTC...ACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATTTCCATTCTATATCTaGATGGTCAGCAATCAGTTG +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVFPFYI*MVSNQL
Trigger: CAACTGATTGCTGACCATGCAGATATAGAATGGAAA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAACCAAAGCTTTGTTCGTaGAAATTTCCATTCTATATC +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQPKLCS*KFPFYI
Trigger: GATATAGAATGGAAATTTGCACGAACAAAGCTTTGG...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCTTTTTCTTGTCCTTaGTATTACCTTCGCTATCAC +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVSFSCP*YYLRYH
Trigger: GTGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTTTCTGTGGGTTATTaGAACAGTACAAGAATACAA +
Preference number: 4 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQVSVGY*NSTRIQ
Trigger: TTGTATTCTTGTACTGTTGCAATAACCCACAGAAAC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTCTGGTGAATTTGACTTaGAGAGACGTCTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMILVNLT*RDVFTV
Trigger: GACAGTGAAGACGTCTCTGCAAGTCAAATTCACCAG...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGCCAATAGAAATGTATTaGAAGGCACAAATGCAAGCC +
Preference number: 4 (lower is better)
Translates to: KTGATSEGCKEQYINVNRPIEMY*KAQMQA
Trigger: GGCTTGCATTTGTGCCTTGCAATACATTTCTATTGG...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGGATGAACAGTCCAAGTaGGCTTTTGGGAGCTATCAG +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKDEQSK*AFGSYQ
Trigger: CTGATAGCTCCCAAAAGCCCACTTGGACTGTTCATC...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCGCAGATTGTATTGTaGAAAGTTTGCTTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVSQIVL*KVCFLL
Trigger: TAAGAGGAAGCAAACTTTCCACAATACAATCTGCGA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CCA 90 bp TTTAGCATCTCTAATCATTGCAGCAACGTATCGCTTCACCAGGTTCCTCATAACTCGCAGATTGTATTGTaGAAAGTTTGCTTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: FSISNHCSNVSLHQVPHNSQIVL*KVCFLL
Trigger: TAAGAGGAAGCAAACTTTCCACAATACAATCTGCGA...GTTATGAGGAACCTGGTGAAGCGATACGTTGCTGCAATGATTAGAGATGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CCA 90 bp TTTTGCATGTTTCTCCTTTGGTATTATAGGAACCGTGTCCTCCACCACCACCTTGTATTCCTTTCTCTATaGTCTACTAACACACATTGT +
Preference number: 4 (lower is better)
Translates to: FCMFLLWYYRNRVLHHHLVFLSL*STNTHC
Trigger: ACAATGTGTGTTAGTAGACCATAGAGAAAGGAATAC...AAGGTGGTGGTGGAGGACACGGTTCCTATAATACCAAAGGAGAAACATGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CCA 90 bp CTTCCTCTTAGTAATCCCAGGACTTCAAAGCGGAAACTAGAAATGTCTTGCTTTTGCATGTTTCTCCTTTaGTATTATAGGAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: LPLSNPRTSKRKLEMSCFCMFLL*YYRNRV
Trigger: GACACGGTTCCTATAATACCAAAGGAGAAACATGCA...AAAGCAAGACATTTCTAGTTTCCGCTTTGAAGTCCTGGGATTACTAAGAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CCA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGACTGTCCTAGAAATCTaGTGTGTGTTTCACACTTAC +
Preference number: 4 (lower is better)
Translates to: KTGATSEGCKEQYINVNRTVLEI*CVFHTY
Trigger: GTAAGTGTGAAACACACACCAGATTTCTAGGACAGT...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR CAA 72 bp GTTCCAAAACTTTCTGGCTTTCTTCTCATCTTTTTCTaGCACAAGTGTGTCCAGATCCATTTGATCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VPKLSGFLLIFF*HKCVQIHLIRY
Trigger: GTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAAAAAGATGAGAAGAAAGCCAGAAAGTTTTGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCAGAACAACCAGAGAGATaGCATTGTATGTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLAEQPER*HCMSQT
Trigger: TGTTTGGGACATACAATGTCATCTCTCTGGTTGTTC...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp AAAGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTTTAACTGAAAGGCTGTaGGAAAAGGATCTTCGCTTG +
Preference number: 4 (lower is better)
Translates to: KALFVQISILYLHGQQSVLTERL*EKDLRL
Trigger: CAAGCGAAGATCCTTTTCTCACAGCCTTTCAGTTAA...AACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATAGTTCCCAACTTAACTaGAAGGCTGTGAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GNEKLSAITLFSLGPMINSSQLN*KAVRKG
Trigger: TCCTTTTCTCACAGCCTTTCAGTTAAGTTGGGAACT...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGCCCCAGGATTTGCTCTaGGTCCTAATATACTTGAGA +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKPQDLL*VLIYLR
Trigger: TCTCAAGTATATTAGGACTCAGAGCAAATCCTGGGG...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp CTTCCTCTTAGTAATCCCAGGACTTCAAAGCGGAAACTAGAAATGTCTTGCTTTCTTACTTGGTATTGGTaGTGTCTTCTCAAGTTATCA +
Preference number: 4 (lower is better)
Translates to: LPLSNPRTSKRKLEMSCFLTWYW*CLLKLS
Trigger: TGATAACTTGAGAAGACATCACCAATACCAAGTAAG...AAAGCAAGACATTTCTAGTTTCCGCTTTGAAGTCCTGGGATTACTAAGAGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR GCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATCTATTTCTTCGTCTCTaGAAAGTTGCAATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GNEKLSAITLFSLGPMINLFLRL*KVAIFG
Trigger: CCCGAAGATTGCAACTTTGCAGAGACGAAGAAATAG...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATCCATGTTTCATGCCATaGTATTTCTTCGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GNEKLSAITLFSLGPMINPCFMP*YFFVSA
Trigger: TGCAGAGACGAAGAAATAGCATGGCATGAAACATGG...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATGACCAAAACAGGGACTaGAGTGTCTCAAATAACGTT +
Preference number: 4 (lower is better)
Translates to: GNEKLSAITLFSLGPMINDQNRD*SVSNNV
Trigger: AACGTTATTTGAGACACTGCAGTCCCTGTTTTGGTC...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACCAAAGCTTTGTTCGTaGAAATTTCCATTCTATATC +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVPKLCS*KFPFYI
Trigger: GATATAGAATGGAAATTTGCACGAACAAAGCTTTGG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR GCA 90 bp GTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCACGTAATCCCAAAGCTTTGTTCGTaGAAATTTCCATTCTATATC +
Preference number: 4 (lower is better)
Translates to: VYGKRFLLQVSQSCGHVIPKLCS*KFPFYI
Trigger: GATATAGAATGGAAATTTGCACGAACAAAGCTTTGG...GATTACGTGACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR GCA 90 bp CATTGCTTATGTTATGTCTTTCAGAGGCAATTGCTGCTGATCTCGGATGAATCATCTTTTTCTTGTCCTTaGTATTACCTTCGCTATCAC +
Preference number: 4 (lower is better)
Translates to: HCLCYVFQRQLLLISDESSFSCP*YYLRYH
Trigger: GTGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGA...TGATTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGACATAACATAAGCAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR GCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGCCAGGGCAGAGCCATTaGTTATGTTATGTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKPGQSH*LCYVFQ
Trigger: CTGAAAGACATAACATAAGCAATGGCTCTGCCCTGG...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp TATATGAATAGAAACTTCAAAATGTCCAGGAGCATTCTTCCCAGAGATATTTGCCCAGGGCAGAGCCATTaGTTATGTTATGTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: YMNRNFKMSRSILPRDICPGQSH*LCYVFQ
Trigger: CTGAAAGACATAACATAAGCAATGGCTCTGCCCTGG...GCAAATATCTCTGGGAAGAATGCTCCTGGACATTTTGAAGTTTCTATTCATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR CCA 90 bp ACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATGCATGTTTCTCCTTTaGTATTATAGGAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: TTENTYVYGKRFLLQVSQCMFLL*YYRNRV
Trigger: GACACGGTTCCTATAATACCAAAGGAGAAACATGCA...TTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CCA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTGGCTGCCAAAATGATTaGTGTAATGTCTGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMIGCQND*CNVWSE
Trigger: TTCACTCCAGACATTACACCAATCATTTTGGCAGCC...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGCTAAAATGTTTCTGTaGGTTATTGCAACAGTACAA +
Preference number: 4 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVAKMFL*VIATVQ
Trigger: TTGTACTGTTGCAATAACCCACAGAAACATTTTAGC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCATGCTTGTACTGTTATTaGTGTTGCTTGACGGAACAG +
Preference number: 4 (lower is better)
Translates to: HVTGNMPQLINAIKCKLACLYCY*CCLTEQ
Trigger: CTGTTCCGTCAAGCAACACCAATAACAGTACAAGCA...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATACGAGCAACTTCTTCTaGAACAGAGAAGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: GNEKLSAITLFSLGPMINTSNFF*NREDLV
Trigger: AACCAAATCTTCTCTGTTTCAGAAGAAGTTGCTCGT...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR TCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGCCTCGAGATTCCAGTTaGATATTTCTCTCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKPRDSS*IFLSSG
Trigger: ACCACTTGAGAGAAATATTCAACTGGAATCTCGAGG...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR TCA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTCACTTTGTTCTTCTATaGGACTATTGTCATCTCGGT +
Preference number: 4 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMIHFVLL*DYCHLG
Trigger: ACCGAGATGACAATAGTCTCATAGAAGAACAAAGTG...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGCCATGTTTCATGCCATaGTATTTCTTCGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKPCFMP*YFFVSA
Trigger: TGCAGAGACGAAGAAATAGCATGGCATGAAACATGG...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGCTGAGCCATGTTTCATaGCATGCTATTTCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKLSHVS*HAISSS
Trigger: AGACGAAGAAATAGCATGGCATGAAACATGGCTCAG...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATCACATCTTATGCCTTTaGAGGTTAACCCTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: GNEKLSAITLFSLGPMINHILCL*RLTLSF
Trigger: AAACGAAAGGGTTAACCTGCAAAGGCATAAGATGTG...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGCCAAAGCTTTGTTCGTaGAAATTTCCATTCTATATC +
Preference number: 4 (lower is better)
Translates to: KTGATSEGCKEQYINVNRPKLCS*KFPFYI
Trigger: GATATAGAATGGAAATTTGCACGAACAAAGCTTTGG...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp TATATGAATAGAAACTTCAAAATGTCCAGGAGCATTCTTCCCAGAGATATTTGCAGCATCTCTAATCATTaGAGCAACGTATCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: YMNRNFKMSRSILPRDICSISNH*SNVSLH
Trigger: GTGAAGCGATACGTTGCTGCAATGATTAGAGATGCT...GCAAATATCTCTGGGAAGAATGCTCCTGGACATTTTGAAGTTTCTATTCATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR GCA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTTTTGCACACTTCTCTTaGTTTAGAAGAAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMIFAHFS*FRRRDS
Trigger: AGAGTCCCTTCTTCTAAAGCAAGAGAAGTGTGCAAA...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp AAGTATTTCAAGTTGCTGTCTACGTCAAGGCAAGAAAGTGAGTATGTTTTTGCAACTGAAAGGAAACCCTaGAACAACCTAAAACACTAC +
Preference number: 4 (lower is better)
Translates to: KYFKLLSTSRQESEYVFATERKP*NNLKHY
Trigger: GTAGTGTTTTAGGTTGTTCCAGGGTTTCCTTTCAGT...TGCAAAAACATACTCACTTTCTTGCCTTGACGTAGACAGCAACTTGAAATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR CAA 72 bp GTGTGTTTCACACTTACAGCACATCTTAATTCAGACTaGTCACACTTACAAGTGATTAATAGCCGTATGAGT +
Preference number: 4 (lower is better)
Translates to: VCFTLTAHLNSD*SHLQVINSRMS
Trigger: ACTCATACGGCTATTAATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
3UTR CAA 72 bp GTGAAAATTTCAAGACATAGTACAAGGACAACTTACTaGGTATTGGTGATGTCTTCTCAAGTTATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VKISRHSTRTTY*VLVMSSQVISS
Trigger: GCTGCTGATAACTTGAGAAGACATCACCAATACCAAGTAAGTTGTCCTTGTACTATGTCTTGAAATTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR TCA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTTTCAATAAAGAGCTGTaGGACTGGATAGTCATTTAC +
Preference number: 4 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMIFNKEL*DWIVIY
Trigger: GTAAATGACTATCCAGTCTCACAGCTCTTTATTGAA...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGCACATCTTATGCCTTTaGAGGTTAACCCTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKHILCL*RLTLSF
Trigger: AAACGAAAGGGTTAACCTGCAAAGGCATAAGATGTG...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR GCA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTGTGAATTCAGAGAACTaGTTATCAAGGAGTATAGGA +
Preference number: 4 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMIVNSEN*LSRSIG
Trigger: TCCTATACTCCTTGATAAGCAGTTCTCTGAATTCAC...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATATTGCAAGGCACAAATaGAAGCCACATACGTATTTT +
Preference number: 4 (lower is better)
Translates to: GNEKLSAITLFSLGPMINIARHK*KPHTYF
Trigger: AAAATACGTATGTGGCTTGCATTTGTGCCTTGCAAT...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp AATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTGTATTCCTTTCTCTATaGTCTACTAACACACATTGT +
Preference number: 4 (lower is better)
Translates to: NTYVYGKRFLLQVSQSCGVFLSL*STNTHC
Trigger: ACAATGTGTGTTAGTAGACCATAGAGAAAGGAATAC...ACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR TCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGCAGTTTCATCATATGTaGAATGGGGATAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKQFHHM*NGDKNR
Trigger: CCTGTTTTTATCCCCATTTCACATATGATGAAACTG...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp TATATGAATAGAAACTTCAAAATGTCCAGGAGCATTCTTCCCAGAGATATTTGCTTTCCATTCTATATCTaGATGGTCAGCAATCAGTTG +
Preference number: 4 (lower is better)
Translates to: YMNRNFKMSRSILPRDICFPFYI*MVSNQL
Trigger: CAACTGATTGCTGACCATGCAGATATAGAATGGAAA...GCAAATATCTCTGGGAAGAATGCTCCTGGACATTTTGAAGTTTCTATTCATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR GCA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTCTTTGCTTGCTATCCTaGTGTTGTTTGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVILCLLS*CCLTFL
Trigger: AAGAAAAGTCAAACAACAGCAGGATAGCAAGCAAAG...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATCAGCTAAAAATACAATaGATGAGGACTAAGAATGGA +
Preference number: 4 (lower is better)
Translates to: GNEKLSAITLFSLGPMINQLKIQ*MRTKNG
Trigger: TCCATTCTTAGTCCTCATGCATTGTATTTTTAGCTG...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CCA 90 bp GCCTTATTTAAACATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTCGCAGATTGTATTGTaGAAAGTTTGCTTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: ALFKHVTGNMPQLINAIKSQIVL*KVCFLL
Trigger: TAAGAGGAAGCAAACTTTCCACAATACAATCTGCGA...CTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATGTTTAAATAAGGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
3UTR CAA 72 bp AAAAGGTTTTGTTGCTTGTACTGTTATTGGTGTTGCTaGACGGAACAGAGAGAATTTGAAATTAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: KRFCCLYCYWCC*TEQREFEIKFW
Trigger: CCAGAATTTAATTTCAAATTCTCTCTGTTCCGTCAAGCAACACCAATAACAGTACAAGCAACAAAACCTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR GCA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTTGTAACCCCTGTATATaGATGTTTTATAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVICNPCI*MFYNLL
Trigger: GAGCAAGTTATAAAACATGCATATACAGGGGTTACA...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCAGATGCCAGCAGCTGTaGACAATTGGGCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: PPPRALRKIRMCMVNASSRCQQL*TIGLGN
Trigger: GTTGCCCAGCCCAATTGTCAACAGCTGCTGGCATCT...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTCCACTCGACGATGGTaGGTGGTGGACCTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLSTRRW*VVDLAC
Trigger: ACAGGCAAGGTCCACCACCAACCATCGTCGAGTGGA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CAA 90 bp GTGGTGAAGGGAATGGCTCTGATGGACACATCACAGCTCCATCATGAGCTGTATGGGCTCGGGATGACATaGAAGGGAGTAGGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: VVKGMALMDTSQLHHELYGLGMT*KGVGRV
Trigger: TACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCC...ATACAGCTCATGATGGAGCTGTGATGTGTCCATCAGAGCCATTCCCTTCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGAGATGCCAGCAGCTGTaGACAATTGGGCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: HICQQHLGVVRIILSRALRCQQL*TIGLGN
Trigger: GTTGCCCAGCCCAATTGTCAACAGCTGCTGGCATCT...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp ACCACCTTCTCTGACTTGAATGGACACACTCTCTTTCCTACCTGTAACCCCAGTAGATGCCAGCAGCTGTaGACAATTGGGCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: TTFSDLNGHTLFPTCNPSRCQQL*TIGLGN
Trigger: GTTGCCCAGCCCAATTGTCAACAGCTGCTGGCATCT...ACTGGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTCCACTCGACGATGGTaGGTGGTGGACCTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKSTRRW*VVDLAC
Trigger: ACAGGCAAGGTCCACCACCAACCATCGTCGAGTGGA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTAGGTACCAGAGAGACTaGGGGCTCGGGATGACATTG +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLRYQRD*GLGMTL
Trigger: CAATGTCATCCCGAGCCCCAAGTCTCTCTGGTACCT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAGGTACCAGAGAGACTaGGGGCTCGGGATGACATTG +
Preference number: 5 (lower is better)
Translates to: PPRALRKIRMCMVNASSFRYQRD*GLGMTL
Trigger: CAATGTCATCCCGAGCCCCAAGTCTCTCTGGTACCT...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CTTGGGGCTCGGGATGACATTGAAGGGAGTAGGCAGAGTACCTCCTTCTTCAAACAGCTCGCCTCCCTATaGTTCCAAAACTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LGARDDIEGSRQSTSFFKQLASL*FQNFLA
Trigger: AGCCAGAAAGTTTTGGAACAATAGGGAGGCGAGCTG...TTTGAAGAAGGAGGTACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCCTGAGTCTGCCGAATTaGAAGACTCCTTCGAGGCAT +
Preference number: 5 (lower is better)
Translates to: PPPRALRKIRMCMVNASSLSLPN*KTPSRH
Trigger: ATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAG...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGGGCTCGGGATGACATaGAAGGGAGTAGGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKGLGMT*KGVGRV
Trigger: TACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGAGGTACCAGAGAGACTaGGGGCTCGGGATGACATTG +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKRYQRD*GLGMTL
Trigger: CAATGTCATCCCGAGCCCCAAGTCTCTCTGGTACCT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp TGGTCTACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTTGTGTCCAGATCCATTaGATCAGGTACCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: WSTNTHCSLRPGMLRSPRCVQIH*IRYQRD
Trigger: GTCTCTCTGGTACCTGATCAAATGGATCTGGACACA...ACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGTAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCGTCTTTCAGAGGCAATaGCTGCTGATCTCGGATGAA +
Preference number: 5 (lower is better)
Translates to: PPPRALRKIRMCMVNASSVFQRQ*LLISDE
Trigger: TTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGAC...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp ACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTGAAGCTTCCTTAGCAAATTGTTaGCACTGCCGTGACAGCTCT +
Preference number: 5 (lower is better)
Translates to: TNTHCSLRPGMLRSPREASLANC*HCRDSS
Trigger: AGAGCTGTCACGGCAGTGCAAACAATTTGCTAAGGA...AGCTTCACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAAGATGCCAGCAGCTGTaGACAATTGGGCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQRCQQL*TIGLGN
Trigger: GTTGCCCAGCCCAATTGTCAACAGCTGCTGGCATCT...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCCACTCGACGATGGTaGGTGGTGGACCTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVSTRRW*VVDLAC
Trigger: ACAGGCAAGGTCCACCACCAACCATCGTCGAGTGGA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTCTTCCCAGAGATATTaGCAGAGGTCCCAGGTGAGA +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLSSQRY*QRSQVR
Trigger: TCTCACCTGGGACCTCTGCAAATATCTCTGGGAAGA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGGCTCGGGATGACATaGAAGGGAGTAGGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQGLGMT*KGVGRV
Trigger: TACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCCAGCTCGCCTCCCTATaGTTCCAAAACTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: PPRALRKIRMCMVNASSFQLASL*FQNFLA
Trigger: AGCCAGAAAGTTTTGGAACAATAGGGAGGCGAGCTG...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTGAGTCTGCCGAATTaGAAGACTCCTTCGAGGCAT +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLLSLPN*KTPSRH
Trigger: ATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGCTGAGTCTGCCGAATTaGAAGACTCCTTCGAGGCAT +
Preference number: 5 (lower is better)
Translates to: HICQQHLGVVRIILSRALLSLPN*KTPSRH
Trigger: ATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAG...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp GTGGTGAAGGGAATGGCTCTGATGGACACATCACAGCTCCATCATGAGCTGTATTCCTTAGCAAATTGTTaGCACTGCCGTGACAGCTCT +
Preference number: 5 (lower is better)
Translates to: VVKGMALMDTSQLHHELYSLANC*HCRDSS
Trigger: AGAGCTGTCACGGCAGTGCAAACAATTTGCTAAGGA...ATACAGCTCATGATGGAGCTGTGATGTGTCCATCAGAGCCATTCCCTTCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTCACATCTTATGCCTTaGCAGGTTAACCCTTTCGTT +
Preference number: 5 (lower is better)
Translates to: PPPRALRKIRMCMVNASSSHLMP*QVNPFV
Trigger: AACGAAAGGGTTAACCTGCAAAGGCATAAGATGTGA...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGGGCTCGGGATGACATaGAAGGGAGTAGGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVGLGMT*KGVGRV
Trigger: TACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTGTGTCCAGATCCATTaGATCAGGTACCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLCVQIH*IRYQRD
Trigger: GTCTCTCTGGTACCTGATCAAATGGATCTGGACACA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp TTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGACTTGGGGTGTGTCCAGATCCATTaGATCAGGTACCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: FLHKCVQIHLIRYQRDLGCVQIH*IRYQRD
Trigger: GTCTCTCTGGTACCTGATCAAATGGATCTGGACACA...CCCCAAGTCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CTCTTTTCATCTGAGTCTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATCAGCTCGCCTCCCTATaGTTCCAAAACTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LFSSESAEFEDSFEAFADQLASL*FQNFLA
Trigger: AGCCAGAAAGTTTTGGAACAATAGGGAGGCGAGCTG...ATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCCATTCGCAGATTGTATaGTGGAAAGTTTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PPPRALRKIRMCMVNASSHSQIV*WKVCFL
Trigger: GAGGAAGCAAACTTTCCACAATACAATCTGCGAATG...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTCCTCGAGATTCCAGTaGAATATTTCTCTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: PPPRALRKIRMCMVNASSSSRFQ*NISLKW
Trigger: CCACTTGAGAGAAATATTCAACTGGAATCTCGAGGA...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp TTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGACTTGGGGTCCTTAGCAAATTGTTaGCACTGCCGTGACAGCTCT +
Preference number: 5 (lower is better)
Translates to: FLHKCVQIHLIRYQRDLGSLANC*HCRDSS
Trigger: AGAGCTGTCACGGCAGTGCAAACAATTTGCTAAGGA...CCCCAAGTCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp GTGGTGAAGGGAATGGCTCTGATGGACACATCACAGCTCCATCATGAGCTGTATGTACTGTTATTGGTGTaGCTTGACGGAACAGAGAGA +
Preference number: 5 (lower is better)
Translates to: VVKGMALMDTSQLHHELYVLLLV*LDGTER
Trigger: TCTCTCTGTTCCGTCAAGCAACACCAATAACAGTAC...ATACAGCTCATGATGGAGCTGTGATGTGTCCATCAGAGCCATTCCCTTCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp TGGTCTACTAACACACATTGTTCACTGAGACCGGGAATGCTCAGGTCACCCCGTTCTCCACTAGGTTTTTaGTGGTTCAATAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: WSTNTHCSLRPGMLRSPRSPLGF*WFNNSS
Trigger: TGAGCTGTTATTGAACCACAAAAAACCTAGTGGAGA...ACGGGGTGACCTGAGCATTCCCGGTCTCAGTGAACAATGTGTGTTAGTAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATCTTCCCAGAGATATTaGCAGAGGTCCCAGGTGAGA +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQSSQRY*QRSQVR
Trigger: TCTCACCTGGGACCTCTGCAAATATCTCTGGGAAGA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTGTGTCCAGATCCATTaGATCAGGTACCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKCVQIH*IRYQRD
Trigger: GTCTCTCTGGTACCTGATCAAATGGATCTGGACACA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp TTTCCTACCTGTAACCCCAGTGTGTCCGTATTCCTTTCTCTATGGTCTACTAACCTGAGTCTGCCGAATTaGAAGACTCCTTCGAGGCAT +
Preference number: 5 (lower is better)
Translates to: FPTCNPSVSVFLSLWSTNLSLPN*KTPSRH
Trigger: ATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAG...GTTAGTAGACCATAGAGAAAGGAATACGGACACACTGGGGTTACAGGTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAACTGAGTCTGCCGAATTaGAAGACTCCTTCGAGGCAT +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQLSLPN*KTPSRH
Trigger: ATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAG...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCACCACCTTCTCTGACTaGAATGGACACACTCTCTTT +
Preference number: 5 (lower is better)
Translates to: PPRALRKIRMCMVNASSFTTFSD*NGHTLF
Trigger: AAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTACCACCTTCTCTGACTaGAATGGACACACTCTCTTT +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLTTFSD*NGHTLF
Trigger: AAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTTGCTACTGGTGAATTaGACTTGCAGAGACGTCTTC +
Preference number: 5 (lower is better)
Translates to: PPRALRKIRMCMVNASSFLLLVN*TCRDVF
Trigger: GAAGACGTCTCTGCAAGTCAAATTCACCAGTAGCAA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CTTCCTCTTAGTAATCCCAGGACTTCAAAGCGGAAACTAGAAATGTCTTGCTTTTGGTCCTGCAGCCTGTaGACGAGCAACTTCTTCGCT +
Preference number: 5 (lower is better)
Translates to: LPLSNPRTSKRKLEMSCFWSCSL*TSNFFA
Trigger: AGCGAAGAAGTTGCTCGTCAACAGGCTGCAGGACCA...AAAGCAAGACATTTCTAGTTTCCGCTTTGAAGTCCTGGGATTACTAAGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CAA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATTCCACTCGACGATGGTaGGTGGTGGACCTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: GNEKLSAITLFSLGPMINSTRRW*VVDLAC
Trigger: ACAGGCAAGGTCCACCACCAACCATCGTCGAGTGGA...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCTTCCCAGAGATATTaGCAGAGGTCCCAGGTGAGA +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVSSQRY*QRSQVR
Trigger: TCTCACCTGGGACCTCTGCAAATATCTCTGGGAAGA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCATTGATTTAGGCCATTaGCAAATGCTAGCAACACAA +
Preference number: 5 (lower is better)
Translates to: PPPRALRKIRMCMVNASSIDLGH*QMLATQ
Trigger: TTGTGTTGCTAGCATTTGCAAATGGCCTAAATCAAT...GGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTCACATCTTATGCCTTaGCAGGTTAACCCTTTCGTT +
Preference number: 5 (lower is better)
Translates to: PPRALRKIRMCMVNASSFSHLMP*QVNPFV
Trigger: AACGAAAGGGTTAACCTGCAAAGGCATAAGATGTGA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGTCACATCTTATGCCTTaGCAGGTTAACCCTTTCGTT +
Preference number: 5 (lower is better)
Translates to: HICQQHLGVVRIILSRALSHLMP*QVNPFV
Trigger: AACGAAAGGGTTAACCTGCAAAGGCATAAGATGTGA...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTCACATCTTATGCCTTaGCAGGTTAACCCTTTCGTT +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLSHLMP*QVNPFV
Trigger: AACGAAAGGGTTAACCTGCAAAGGCATAAGATGTGA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp AATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTGGGCTCGGGATGACATaGAAGGGAGTAGGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: NTYVYGKRFLLQVSQSCGGLGMT*KGVGRV
Trigger: TACTCTGCCTACTCCCTTCAATGTCATCCCGAGCCC...ACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTTCTCATCTTTTTCTaGCACAAGTGTGTCCAGATC +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLLLIFF*HKCVQI
Trigger: GATCTGGACACACTTGTGCAAGAAAAAGATGAGAAG...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACAGCTCGCCTCCCTATaGTTCCAAAACTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVQLASL*FQNFLA
Trigger: AGCCAGAAAGTTTTGGAACAATAGGGAGGCGAGCTG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTCTTTCAGAGGCAATaGCTGCTGATCTCGGATGAA +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQVFQRQ*LLISDE
Trigger: TTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGAC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGACCAGGGCAGAGCCATaGCTTATGTTATGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKTRAEP*LMLCLS
Trigger: TGAAAGACATAACATAAGCAATGGCTCTGCCCTGGT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CTCTTTTCATCTGAGTCTGCCGAATTTGAAGACTCCTTCGAGGCATTCGCAGATACCAGGGCAGAGCCATaGCTTATGTTATGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: LFSSESAEFEDSFEAFADTRAEP*LMLCLS
Trigger: TGAAAGACATAACATAAGCAATGGCTCTGCCCTGGT...ATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR CAA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTCCTCGAGATTCCAGTaGAATATTTCTCTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: PPRALRKIRMCMVNASSFSSRFQ*NISLKW
Trigger: CCACTTGAGAGAAATATTCAACTGGAATCTCGAGGA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATCCTTAGCAAATTGTTaGCACTGCCGTGACAGCTCT +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQSLANC*HCRDSS
Trigger: AGAGCTGTCACGGCAGTGCAAACAATTTGCTAAGGA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCGGCAACAAACTCTTTTaGACGGTACTTAATGGCCAA +
Preference number: 5 (lower is better)
Translates to: PPRALRKIRMCMVNASSFGNKLF*TVLNGQ
Trigger: TTGGCCATTAAGTACCGTCAAAAAGAGTTTGTTGCC...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS-3UTR CAA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGGAACAGAGGCTGGCATaGTTATTGCTGTTATTCCTT +
Preference number: 5 (lower is better)
Translates to: HICQQHLGVVRIILSRALEQRLA*LLLLFL
Trigger: AAGGAATAACAGCAATAACAATGCCAGCCTCTGTTC...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGTTGCTTGTACTGTTATaGGTGTTGCTTGACGGAACA +
Preference number: 5 (lower is better)
Translates to: HICQQHLGVVRIILSRALLLVLL*VLLDGT
Trigger: TGTTCCGTCAAGCAACACCAATAACAGTACAAGCAA...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS GCA 90 bp AAGATGTTTGCAATAGCAAATAAAGCCTCTGCCACCAGAGTGGGATaGCACATGTCCCATGATTCTCGTGGATTAAGGGCACTTTACAAA +
Preference number: 5 (lower is better)
Translates to: KMFAIANKASATRVG*HMSHDSRGLRALYK
Trigger: TTTGTAAAGTGCCCTTAATCCACGAGAATCATGGGACATGTGGCATCCCACTCTGGTGGCAGAGGCTTTATTTGCTATTGCAAACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494529.1
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTCTCCACTAGGTTTTTaGTGGTTCAATAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLSPLGF*WFNNSS
Trigger: TGAGCTGTTATTGAACCACAAAAAACCTAGTGGAGA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp TTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGACTTGGGGTCTCCACTAGGTTTTTaGTGGTTCAATAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: FLHKCVQIHLIRYQRDLGSPLGF*WFNNSS
Trigger: TGAGCTGTTATTGAACCACAAAAAACCTAGTGGAGA...CCCCAAGTCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp TCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTGGTAAGAATTAGGTACCAGAGAGACTaGGGGCTCGGGATGACATTG +
Preference number: 5 (lower is better)
Translates to: SCKFPFYICMVSNQLVRIRYQRD*GLGMTL
Trigger: CAATGTCATCCCGAGCCCCAAGTCTCTCTGGTACCT...AATTCTTACCAACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGCAGCTCGCCTCCCTATaGTTCCAAAACTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: KTGATSEGCKEQYINVNRQLASL*FQNFLA
Trigger: AGCCAGAAAGTTTTGGAACAATAGGGAGGCGAGCTG...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGCATTCGCAGATTGTATaGTGGAAAGTTTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKHSQIV*WKVCFL
Trigger: GAGGAAGCAAACTTTCCACAATACAATCTGCGAATG...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAACGAGGCATTCGCAGATaGTATTGTGGAAAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQRGIRR*YCGKFA
Trigger: AGCAAACTTTCCACAATACAATCTGCGAATGCCTCG...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGTCTTTCAGAGGCAATaGCTGCTGATCTCGGATGAA +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVVFQRQ*LLISDE
Trigger: TTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGAC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAACCAGGGCAGAGCCATaGCTTATGTTATGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQTRAEP*LMLCLS
Trigger: TGAAAGACATAACATAAGCAATGGCTCTGCCCTGGT...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAACCACCTTCTCTGACTaGAATGGACACACTCTCTTT +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQTTFSD*NGHTLF
Trigger: AAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTCAAGTATCACAATCTaGTGGTCACGTAATCTTCGT +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLSSITI*WSRNLR
Trigger: ACGAAGATTACGTGACCACAAGATTGTGATACTTGA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CACATCTGTCAGCAACATCTGGGGGTTGTTAGAATCATCCTTTCTAGGGCACTGTGTTATTGGTGTTGCTaGACGGAACAGAGAGAATTT +
Preference number: 5 (lower is better)
Translates to: HICQQHLGVVRIILSRALCYWCC*TEQREF
Trigger: AAATTCTCTCTGTTCCGTCAAGCAACACCAATAACA...CAGTGCCCTAGAAAGGATGATTCTAACAACCCCCAGATGTTGCTGACAGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS GCA 90 bp AGCCTGTTGACGAGCAACTTCTTCAGTTTTAGCATCTCTAATCATTaGAGCAACGTATCGCTTCACCAGGTTCCTCATAACTTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: SLLTSNFFSFSISNH*SNVSLHQVPHNFLV
Trigger: TACCAAGAAGTTATGAGGAACCTGGTGAAGCGATACGTTGCTGCAATGATTAGAGATGCTAAAACTGAAGAAGTTGCTCGTCAACAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355779.6
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTCTCCACTAGGTTTTTaGTGGTTCAATAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKSPLGF*WFNNSS
Trigger: TGAGCTGTTATTGAACCACAAAAAACCTAGTGGAGA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp TTCTTGCACAAGTGTGTCCAGATCCATTTGATCAGGTACCAGAGAGACTTGGGGTGCTGTGCTTTGACATaGGTCACATATAAATTGATG +
Preference number: 5 (lower is better)
Translates to: FLHKCVQIHLIRYQRDLGCCALT*VTYKLM
Trigger: CATCAATTTATATGTGACCAATGTCAAAGCACAGCA...CCCCAAGTCTCTCTGGTACCTGATCAAATGGATCTGGACACACTTGTGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTAACTCATCCAAAGCTTaGTTCGTGCAAATTTCCATT +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLNSSKA*FVQISI
Trigger: AATGGAAATTTGCACGAACAAAGCTTTGGATGAGTT...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAACTTCTCATCTTTTTCTaGCACAAGTGTGTCCAGATC +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQLLIFF*HKCVQI
Trigger: GATCTGGACACACTTGTGCAAGAAAAAGATGAGAAG...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGGTTCCTCATAACTTCTaGGTATTGGTGATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKVPHNF*VLVMSS
Trigger: AGAAGACATCACCAATACCAAGAAGTTATGAGGAAC...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp GGCTTGTGTTTCTCCAAATCTATCTGGCCCATTCCTAAATTCCCAAAAACCAGGCATTCGCAGATTGTATaGTGGAAAGTTTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GLCFSKSIWPIPKFPKTRHSQIV*WKVCFL
Trigger: GAGGAAGCAAACTTTCCACAATACAATCTGCGAATG...CCTGGTTTTTGGGAATTTAGGAATGGGCCAGATAGATTTGGAGAAACACAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCTTCTTTTTCTTGTCCTaGCTATTACCTTCGCTATCA +
Preference number: 5 (lower is better)
Translates to: PPRALRKIRMCMVNASSFFFFLS*LLPSLS
Trigger: TGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGAA...GAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAACCAGGGCAGAGCCATaGCTTATGTTATGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVTRAEP*LMLCLS
Trigger: TGAAAGACATAACATAAGCAATGGCTCTGCCCTGGT...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTCAAGTATCACAATCTaGTGGTCACGTAATCTTCGT +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKSSITI*WSRNLR
Trigger: ACGAAGATTACGTGACCACAAGATTGTGATACTTGA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTCTTCATACTCCGACTaGAATTCATTTTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKSSYSD*NSFSTL
Trigger: CAAGGTGGAAAATGAATTCAAGTCGGAGTATGAAGA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCACCTTCTCTGACTTGAATGGACACACTCTCTTTCCTACCTGTAACCCCAGTTGGCCAATTTTAGTCTaGCAAGATCATTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: TTFSDLNGHTLFPTCNPSWPILV*QDHFHF
Trigger: AAAGTGGAAATGATCTTGCAAGACTAAAATTGGCCA...ACTGGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTGGCCAATTTTAGTCTaGCAAGATCATTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLWPILV*QDHFHF
Trigger: AAAGTGGAAATGATCTTGCAAGACTAAAATTGGCCA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTTGTTTCTGTGGGTTATaGCAACAGTACAAGAATACA +
Preference number: 5 (lower is better)
Translates to: PTQSTTENTYVYGKRFLLCFCGL*QQYKNT
Trigger: TGTATTCTTGTACTGTTGCAATAACCCACAGAAACA...AAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp GAATTTGACTTGCAGAGACGTCTTCACTGTCAGCCTAGTAACGGTGTGACTGTAATGGTTCTTACTAGGTaGAGTTTTAAGGACACTGAG +
Preference number: 5 (lower is better)
Translates to: EFDLQRRLHCQPSNGVTVMVLTR*SFKDTE
Trigger: CTCAGTGTCCTTAAAACTCAACCTAGTAAGAACCAT...TACAGTCACACCGTTACTAGGCTGACAGTGAAGACGTCTCTGCAAGTCAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp ACAACTTACTTGGTATTGGTGATGTCTTCTCAAGTTATCAGCAGCTCGCCTCCCACAAGGACAACTTACTaGGTATTGGTGATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: TTYLVLVMSSQVISSSPPTRTTY*VLVMSS
Trigger: AGAAGACATCACCAATACCAAGTAAGTTGTCCTTGT...GGGAGGCGAGCTGCTGATAACTTGAGAAGACATCACCAATACCAAGTAAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CAA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATTCTTCCCAGAGATATTaGCAGAGGTCCCAGGTGAGA +
Preference number: 5 (lower is better)
Translates to: GNEKLSAITLFSLGPMINSSQRY*QRSQVR
Trigger: TCTCACCTGGGACCTCTGCAAATATCTCTGGGAAGA...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGATTGATTTAGGCCATTaGCAAATGCTAGCAACACAA +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKIDLGH*QMLATQ
Trigger: TTGTGTTGCTAGCATTTGCAAATGGCCTAAATCAAT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTGCTGTGCTTTGACATaGGTCACATATAAATTGATG +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKCCALT*VTYKLM
Trigger: CATCAATTTATATGTGACCAATGTCAAAGCACAGCA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGATAGCTATTAACATGTaGAGTAGAACAACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKIAINM*SRTTRE
Trigger: CTCTCTGGTTGTTCTACTCAACATGTTAATAGCTAT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTATAGCTATTAACATGTaGAGTAGAACAACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSIAINM*SRTTRE
Trigger: CTCTCTGGTTGTTCTACTCAACATGTTAATAGCTAT...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGAACTCATCCAAAGCTTaGTTCGTGCAAATTTCCATT +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKNSSKA*FVQISI
Trigger: AATGGAAATTTGCACGAACAAAGCTTTGGATGAGTT...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACTTCTCATCTTTTTCTaGCACAAGTGTGTCCAGATC +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVLLIFF*HKCVQI
Trigger: GATCTGGACACACTTGTGCAAGAAAAAGATGAGAAG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGCATAACTTCTTGGTATaGGTGATGTCTTCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKHNFLV*VMSSQV
Trigger: AACTTGAGAAGACATCACCAATACCAAGAAGTTATG...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTTCCTCATAACTTCTaGGTATTGGTGATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQVPHNF*VLVMSS
Trigger: AGAAGACATCACCAATACCAAGAAGTTATGAGGAAC...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACATTCGCAGATTGTATaGTGGAAAGTTTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVHSQIV*WKVCFL
Trigger: GAGGAAGCAAACTTTCCACAATACAATCTGCGAATG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTTCTTTTTCTTGTCCTaGCTATTACCTTCGCTATCA +
Preference number: 5 (lower is better)
Translates to: PRALRKIRMCMVNASSFKFFFLS*LLPSLS
Trigger: TGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGAA...CTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp TGCTCAGGTCACCCCGTGAAGCTAATCCTCGAGATTCCAGTTGAATATTTCTCTTTCTTTTTCTTGTCCTaGCTATTACCTTCGCTATCA +
Preference number: 5 (lower is better)
Translates to: CSGHPVKLILEIPVEYFSFFFLS*LLPSLS
Trigger: TGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGAA...AGAGAAATATTCAACTGGAATCTCGAGGATTAGCTTCACGGGGTGACCTGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR CAA 90 bp TTTAGCATCTCTAATCATTGCAGCAACGTATCGCTTCACCAGGTTCCTCATAACTCCTCGAGATTCCAGTaGAATATTTCTCTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: FSISNHCSNVSLHQVPHNSSRFQ*NISLKW
Trigger: CCACTTGAGAGAAATATTCAACTGGAATCTCGAGGA...GTTATGAGGAACCTGGTGAAGCGATACGTTGCTGCAATGATTAGAGATGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp TTTTGCATGTTTCTCCTTTGGTATTATAGGAACCGTGTCCTCCACCACCACCTTTCAAGTATCACAATCTaGTGGTCACGTAATCTTCGT +
Preference number: 5 (lower is better)
Translates to: FCMFLLWYYRNRVLHHHLSSITI*WSRNLR
Trigger: ACGAAGATTACGTGACCACAAGATTGTGATACTTGA...AAGGTGGTGGTGGAGGACACGGTTCCTATAATACCAAAGGAGAAACATGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp TTTAGCATCTCTAATCATTGCAGCAACGTATCGCTTCACCAGGTTCCTCATAACGGCAACAAACTCTTTTaGACGGTACTTAATGGCCAA +
Preference number: 5 (lower is better)
Translates to: FSISNHCSNVSLHQVPHNGNKLF*TVLNGQ
Trigger: TTGGCCATTAAGTACCGTCAAAAAGAGTTTGTTGCC...GTTATGAGGAACCTGGTGAAGCGATACGTTGCTGCAATGATTAGAGATGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGTGTTCTTACCCCTATaGTTCCAAAACTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVVFLPL*FQNFLA
Trigger: AGCCAGAAAGTTTTGGAACAATAGGGGTAAGAACAC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATGCTGTGCTTTGACATaGGTCACATATAAATTGATG +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQCCALT*VTYKLM
Trigger: CATCAATTTATATGTGACCAATGTCAAAGCACAGCA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAATAGCTATTAACATGTaGAGTAGAACAACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQIAINM*SRTTRE
Trigger: CTCTCTGGTTGTTCTACTCAACATGTTAATAGCTAT...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCATGTGTCCAGATCCATTaGATCAGGTACCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: HVTGNMPQLINAIKCKLACVQIH*IRYQRD
Trigger: GTCTCTCTGGTACCTGATCAAATGGATCTGGACACA...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTTGTGTCCAGATCCATTaGATCAGGTACCAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMICVQIH*IRYQRD
Trigger: GTCTCTCTGGTACCTGATCAAATGGATCTGGACACA...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp AGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTGGCTTCTCATCTTTTTCTaGCACAAGTGTGTCCAGATC +
Preference number: 5 (lower is better)
Translates to: SFVRANFHSISAWSAISWLLIFF*HKCVQI
Trigger: GATCTGGACACACTTGTGCAAGAAAAAGATGAGAAG...CCAACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAACATAACTTCTTGGTATaGGTGATGTCTTCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQHNFLV*VMSSQV
Trigger: AACTTGAGAAGACATCACCAATACCAAGAAGTTATG...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAGTTCCTCATAACTTCTaGGTATTGGTGATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVVPHNF*VLVMSS
Trigger: AGAAGACATCACCAATACCAAGAAGTTATGAGGAAC...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAATTCTTTTTCTTGTCCTaGCTATTACCTTCGCTATCA +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQFFFLS*LLPSLS
Trigger: TGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGAA...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAAACCACCTTCTCTGACTaGAATGGACACACTCTCTTT +
Preference number: 5 (lower is better)
Translates to: TTENTYVYGKRFLLQVSQTTFSD*NGHTLF
Trigger: AAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT...TTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCAAGTATCACAATCTaGTGGTCACGTAATCTTCGT +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVSSITI*WSRNLR
Trigger: ACGAAGATTACGTGACCACAAGATTGTGATACTTGA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp TTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCTTCAAGTATCACAATCTaGTGGTCACGTAATCTTCGT +
Preference number: 5 (lower is better)
Translates to: FEDSFEAFADCIVESLLPSSITI*WSRNLR
Trigger: ACGAAGATTACGTGACCACAAGATTGTGATACTTGA...AGGAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCTTCATACTCCGACTaGAATTCATTTTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVSSYSD*NSFSTL
Trigger: CAAGGTGGAAAATGAATTCAAGTCGGAGTATGAAGA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp TTTAGCATCTCTAATCATTGCAGCAACGTATCGCTTCACCAGGTTCCTCATAACTCTTCATACTCCGACTaGAATTCATTTTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: FSISNHCSNVSLHQVPHNSSYSD*NSFSTL
Trigger: CAAGGTGGAAAATGAATTCAAGTCGGAGTATGAAGA...GTTATGAGGAACCTGGTGAAGCGATACGTTGCTGCAATGATTAGAGATGCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTACTAAAGTATTTCAAGTaGCTGTCTACGTCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVLKYFK*LSTSRQ
Trigger: TTGCCTTGACGTAGACAGCAACTTGAAATACTTTAG...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp ACCCAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAAGGAAATTAACGGTTTaGCTACTGGTGAATTTGACT +
Preference number: 5 (lower is better)
Translates to: TQSTTENTYVYGKRFLLQRKLTV*LLVNLT
Trigger: AGTCAAATTCACCAGTAGCAAAACCGTTAATTTCCT...TTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAATTGATTTAGGCCATTaGCAAATGCTAGCAACACAA +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVIDLGH*QMLATQ
Trigger: TTGTGTTGCTAGCATTTGCAAATGGCCTAAATCAAT...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTAATAGCTATTAACATGTaGAGTAGAACAACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVIAINM*SRTTRE
Trigger: CTCTCTGGTTGTTCTACTCAACATGTTAATAGCTAT...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp ACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAACTTCTCATCTTTTTCTaGCACAAGTGTGTCCAGATC +
Preference number: 5 (lower is better)
Translates to: TTENTYVYGKRFLLQVSQLLIFF*HKCVQI
Trigger: GATCTGGACACACTTGTGCAAGAAAAAGATGAGAAG...TTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp AATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTCATTCGCAGATTGTATaGTGGAAAGTTTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: NTYVYGKRFLLQVSQSCGHSQIV*WKVCFL
Trigger: GAGGAAGCAAACTTTCCACAATACAATCTGCGAATG...ACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCACGAGGCATTCGCAGATaGTATTGTGGAAAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: HVTGNMPQLINAIKCKLARGIRR*YCGKFA
Trigger: AGCAAACTTTCCACAATACAATCTGCGAATGCCTCG...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp AAGTATTTCAAGTTGCTGTCTACGTCAAGGCAAGAAAGTGAGTATGTTTTTGCACGAGGCATTCGCAGATaGTATTGTGGAAAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: KYFKLLSTSRQESEYVFARGIRR*YCGKFA
Trigger: AGCAAACTTTCCACAATACAATCTGCGAATGCCTCG...TGCAAAAACATACTCACTTTCTTGCCTTGACGTAGACAGCAACTTGAAATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp TCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTGGTAAGAATTCGAGGCATTCGCAGATaGTATTGTGGAAAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: SCKFPFYICMVSNQLVRIRGIRR*YCGKFA
Trigger: AGCAAACTTTCCACAATACAATCTGCGAATGCCTCG...AATTCTTACCAACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CAGAGCACTACGGAAAATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATTCTTTTTCTTGTCCTaGCTATTACCTTCGCTATCA +
Preference number: 5 (lower is better)
Translates to: QSTTENTYVYGKRFLLQVFFFLS*LLPSLS
Trigger: TGATAGCGAAGGTAATAGCAAGGACAAGAAAAAGAA...TACTTGAAGGAGGAAGCGTTTACCATACACATACGTATTTTCCGTAGTGCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338947.9
ENST00000379679.5
ENST00000379705.8
ENST00000488717.5
ENST00000625583.2
CDS-3UTR CAA 90 bp AAGTATTTCAAGTTGCTGTCTACGTCAAGGCAAGAAAGTGAGTATGTTTTTGCAACCACCTTCTCTGACTaGAATGGACACACTCTCTTT +
Preference number: 5 (lower is better)
Translates to: KYFKLLSTSRQESEYVFATTFSD*NGHTLF
Trigger: AAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGGT...TGCAAAAACATACTCACTTTCTTGCCTTGACGTAGACAGCAACTTGAAATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp GCAGTAAACAGTGAGATCAGACGCAGAGAACTGAAGATGTTTGCAATAGCAAATTCTTCATACTCCGACTaGAATTCATTTTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: AVNSEIRRRELKMFAIANSSYSD*NSFSTL
Trigger: CAAGGTGGAAAATGAATTCAAGTCGGAGTATGAAGA...ATTTGCTATTGCAAACATCTTCAGTTCTCTGCGTCTGATCTCACTGTTTACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR CAA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCAACTGGTGAATTTGACTaGCAGAGACGTCTTCACTGT +
Preference number: 5 (lower is better)
Translates to: HVTGNMPQLINAIKCKLATGEFD*QRRLHC
Trigger: ACAGTGAAGACGTCTCTGCAAGTCAAATTCACCAGT...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp TTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCCTACAACTTACTTGGTATaGGTGATGTCTTCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: FEDSFEAFADCIVESLLPTTYLV*VMSSQV
Trigger: AACTTGAGAAGACATCACCAATACCAAGTAAGTTGT...AGGAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426868.6
CDS-3UTR CAA 90 bp AATTTGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTTTGCTTCATTGATTTAGGCCATTaGCAAATGCTAGCAACACAA +
Preference number: 5 (lower is better)
Translates to: NLKTPSRHSQIVLWKVCFIDLGH*QMLATQ
Trigger: TTGTGTTGCTAGCATTTGCAAATGGCCTAAATCAAT...GAAGCAAACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR CAA 90 bp AAAACAGGAGCTACTTCAGAGGGCTGTAAAGAGCAGTACATAAATGTTAACAGGAACTCATCCAAAGCTTaGTTCGTGCAAATTTCCATT +
Preference number: 5 (lower is better)
Translates to: KTGATSEGCKEQYINVNRNSSKA*FVQISI
Trigger: AATGGAAATTTGCACGAACAAAGCTTTGGATGAGTT...CCTGTTAACATTTATGTACTGCTCTTTACAGCCCTCTGAAGTAGCTCCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CATTGCTTATGTTATGTCTTTCAGAGGCAATTGCTGCTGATCTCGGATGAATCACATAACTTCTTGGTATaGGTGATGTCTTCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: HCLCYVFQRQLLLISDESHNFLV*VMSSQV
Trigger: AACTTGAGAAGACATCACCAATACCAAGAAGTTATG...TGATTCATCCGAGATCAGCAGCAATTGCCTCTGAAAGACATAACATAAGCAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR CAA 90 bp TATATGAATAGAAACTTCAAAATGTCCAGGAGCATTCTTCCCAGAGATATTTGCCGAGGCATTCGCAGATaGTATTGTGGAAAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: YMNRNFKMSRSILPRDICRGIRR*YCGKFA
Trigger: AGCAAACTTTCCACAATACAATCTGCGAATGCCTCG...GCAAATATCTCTGGGAAGAATGCTCCTGGACATTTTGAAGTTTCTATTCATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488717.5
CDS-3UTR CAA 90 bp TGTTTCACACTTACAGCACATCTTAATTCAGACTTGTCACACTTACAAGTGATTACCAGGGCAGAGCCATaGCTTATGTTATGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: CFTLTAHLNSDLSHLQVITRAEP*LMLCLS
Trigger: TGAAAGACATAACATAAGCAATGGCTCTGCCCTGGT...AATCACTTGTAAGTGTGACAAGTCTGAATTAAGATGTGCTGTAAGTGTGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp AAGTATTTCAAGTTGCTGTCTACGTCAAGGCAAGAAAGTGAGTATGTTTTTGCAGGCAACAAACTCTTTTaGACGGTACTTAATGGCCAA +
Preference number: 5 (lower is better)
Translates to: KYFKLLSTSRQESEYVFAGNKLF*TVLNGQ
Trigger: TTGGCCATTAAGTACCGTCAAAAAGAGTTTGTTGCC...TGCAAAAACATACTCACTTTCTTGCCTTGACGTAGACAGCAACTTGAAATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp TTCCCTGGGCTTTACTTTCCCCAGTTATCTACAGTGAACTTATTTAACATGATTAGCAACATCTGGGGGTaGTTAGAATCATCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: FPGLYFPQLSTVNLFNMISNIWG*LESSFL
Trigger: TAGAAAGGATGATTCTAACAACCCCCAGATGTTGCT...AATCATGTTAAATAAGTTCACTGTAGATAACTGGGGAAAGTAAAGCCCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCATCTCCACTAGGTTTTTaGTGGTTCAATAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: HVTGNMPQLINAIKCKLASPLGF*WFNNSS
Trigger: TGAGCTGTTATTGAACCACAAAAAACCTAGTGGAGA...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp AATACGTATGTGTATGGTAAACGCTTCCTCCTTCAAGTATCACAATCTTGTGGTATAGCTATTAACATGTaGAGTAGAACAACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: NTYVYGKRFLLQVSQSCGIAINM*SRTTRE
Trigger: CTCTCTGGTTGTTCTACTCAACATGTTAATAGCTAT...ACCACAAGATTGTGATACTTGAAGGAGGAAGCGTTTACCATACACATACGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS-3UTR CAA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCAGTTCCTCATAACTTCTaGGTATTGGTGATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: HVTGNMPQLINAIKCKLAVPHNF*VLVMSS
Trigger: AGAAGACATCACCAATACCAAGAAGTTATGAGGAAC...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATAGAAACAGTATTTCTTaGCTTGCTATCCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GNEKLSAITLFSLGPMINRNSIS*LAILLL
Trigger: CAACAGCAGGATAGCAAGCAAAGAAATACTGTTTCT...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATTCCAATAGAAATGTATaGCAAGGCACAAATGCAAGC +
Preference number: 5 (lower is better)
Translates to: GNEKLSAITLFSLGPMINSNRNV*QGTNAS
Trigger: GCTTGCATTTGTGCCTTGCAATACATTTCTATTGGA...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp GGTAATGAGAAACTGAGTGCCATAACATTATTCAGTTTGGGGCCAATGATAAATTGCTGTGCTTTGACATaGGTCACATATAAATTGATG +
Preference number: 5 (lower is better)
Translates to: GNEKLSAITLFSLGPMINCCALT*VTYKLM
Trigger: CATCAATTTATATGTGACCAATGTCAAAGCACAGCA...ATTTATCATTGGCCCCAAACTGAATAATGTTATGGCACTCAGTTTCTCATTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp CATGTTACAGGTAATATGCCACAGCTGATAAACGCTATAAAGTGTAAGTTAGCACATAACTTCTTGGTATaGGTGATGTCTTCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: HVTGNMPQLINAIKCKLAHNFLV*VMSSQV
Trigger: AACTTGAGAAGACATCACCAATACCAAGAAGTTATG...TGCTAACTTACACTTTATAGCGTTTATCAGCTGTGGCATATTACCTGTAACATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379705.8
CDS-3UTR CAA 90 bp AAGTATTTCAAGTTGCTGTCTACGTCAAGGCAAGAAAGTGAGTATGTTTTTGCATGGCCAATTTTAGTCTaGCAAGATCATTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: KYFKLLSTSRQESEYVFAWPILV*QDHFHF
Trigger: AAAGTGGAAATGATCTTGCAAGACTAAAATTGGCCA...TGCAAAAACATACTCACTTTCTTGCCTTGACGTAGACAGCAACTTGAAATACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379705.8
CDS-3UTR CAA 90 bp AAAGCTTTGTTCGTGCAAATTTCCATTCTATATCTGCATGGTCAGCAATCAGTTTGGCCAATTTTAGTCTaGCAAGATCATTTCCACTTT +
Preference number: 5 (lower is better)
Translates to: KALFVQISILYLHGQQSVWPILV*QDHFHF
Trigger: AAAGTGGAAATGATCTTGCAAGACTAAAATTGGCCA...AACTGATTGCTGACCATGCAGATATAGAATGGAAATTTGCACGAACAAAGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426868.6
ENST00000488717.5
CDS GCA 72 bp AGTGATGGGATCCGAGGACTGACGGCGCGGGTGCCGTaGGGGGTGAGAGCACGCCCGGCAAATTCCAATGGA +
Preference number: 6 (lower is better)
Translates to: SDGIRGLTARVP*GVRARPANSNG
Trigger: TCCATTGGAATTTGCCGGGCGTGCTCTCACCCCGCACGGCACCCGCGCCGTCAGTCCTCGGATCCCATCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000355779.6
ENST00000358477.6
ENST00000379673.2
ENST00000379705.8
ENST00000426868.6
CDS TCA 72 bp CTTCGTCTCTGCAAAGTTGCAATCTTCGGGCTGAAGTaGTGGGATCCGAGGACTGACGGCGCGGGTGCCGTG +
Preference number: 6 (lower is better)
Translates to: LRLCKVAIFGLK*WDPRTDGAGAV
Trigger: CACGGCACCCGCGCCGTCAGTCCTCGGATCCCATCACTTCAGCCCGAAGATTGCAACTTTGCAGAGACGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338947.9
ENST00000355779.6
ENST00000358477.6
ENST00000379673.2
ENST00000379705.8
ENST00000426868.6
CDS TCA 72 bp GACGATGGTTGGTGGTGGACCTTGCCTGTTCAAGTCTaGCCTGTCGATGTGCTGAGAGGCAAGCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: DDGWWWTLPVQV*PVDVLRGKQQQ
Trigger: CTGCTGCTGCTTGCCTCTCAGCACATCGACAGGTCAGACTTGAACAGGCAAGGTCCACCACCAACCATCGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338947.9
ENST00000355779.6
ENST00000358477.6
ENST00000379673.2
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS GCA 72 bp TCTCCTCCAGCCTGGAAACTCATCGTACCAGCGAGATaGCAGCAGCTGTTGACAATTGGGCTGGGCAACAAA +
Preference number: 6 (lower is better)
Translates to: SPPAWKLIVPAR*QQLLTIGLGNK
Trigger: TTTGTTGCCCAGCCCAATTGTCAACAGCTGCTGGCATCTCGCTGGTACGATGAGTTTCCAGGCTGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338947.9
ENST00000355779.6
ENST00000358477.6
ENST00000379673.2
ENST00000379679.5
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS TCA 72 bp CACACAGTTACAGCGGACCTCGTGGGGTCGAGGCACTaGGACTCCTTTCTGAACCAAGAGTTTTATTATCTC +
Preference number: 6 (lower is better)
Translates to: HTVTADLVGSRH*DSFLNQEFYYL
Trigger: GAGATAATAAAACTCTTGGTTCAGAAAGGAGTCTCAGTGCCTCGACCCCACGAGGTCCGCTGTAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355779.6
ENST00000358477.6
ENST00000379673.2
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS TCA 72 bp AGCCTCTGCCACCAGAGTGGGATGCCACATGTCCCATaGTTCTCGTGGATTAAGGGCACTTTACAAATGCAA +
Preference number: 6 (lower is better)
Translates to: SLCHQSGMPHVP*FSWIKGTLQMQ
Trigger: TTGCATTTGTAAAGTGCCCTTAATCCACGAGAATCATGGGACATGTGGCATCCCACTCTGGTGGCAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494529.1
CDS CAA 72 bp TGGAAACTCATCGTACCAGCGAGATGCCAGCAGCTGTaGACAATTGGGCTGGGCAACAAACTCTTTTTGACG +
Preference number: 6 (lower is better)
Translates to: WKLIVPARCQQL*TIGLGNKLFLT
Trigger: CGTCAAAAAGAGTTTGTTGCCCAGCCCAATTGTCAACAGCTGCTGGCATCTCGCTGGTACGATGAGTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355779.6
ENST00000358477.6
ENST00000379673.2
ENST00000379705.8
ENST00000426868.6
ENST00000625583.2
CDS CAA 72 bp GGCTGGGCAACAAACTGTTTTTCTCCACTAGGTTTTTaGTGGTTCAATAACAGCTCAACAGCTCCGACGACT +
Preference number: 6 (lower is better)
Translates to: GWATNCFSPLGF*WFNNSSTAPTT
Trigger: AGTCGTCGGAGCTGTTGAGCTGTTATTGAACCACAAAAAACCTAGTGGAGAAAAACAGTTTGTTGCCCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338947.9
ENST00000379679.5
CDS CAA 72 bp AGTATAGGAGGCACCTGTTTTTCTCCACTAGGTTTTTaGTGGTTCAATAACAGCTCAACAGCTCCGACGACT +
Preference number: 6 (lower is better)
Translates to: SIGGTCFSPLGF*WFNNSSTAPTT
Trigger: AGTCGTCGGAGCTGTTGAGCTGTTATTGAACCACAAAAAACCTAGTGGAGAAAAACAGGTGCCTCCTATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000355779.6
ENST00000358477.6
ENST00000379673.2
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS CAA 72 bp CAGTTGAATATTTCTCTCAAGTGGTCCTGCAGCCTGTaGACGAGCAACTTCTTCTTCGCTATCACTCTTTTC +
Preference number: 6 (lower is better)
Translates to: QLNISLKWSCSL*TSNFFFAITLF
Trigger: GAAAAGAGTGATAGCGAAGAAGAAGTTGCTCGTCAACAGGCTGCAGGACCACTTGAGAGAAATATTCAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358477.6
ENST00000379673.2
CDS CAA 90 bp CAACTTCTTCTTCGCTATCACTCTTTTCATCTGAGTCTGCCGAATTaGAAGACTCCTTCGAGGCATTCGCAGATTGTATTGTGGAAAGTT +
Preference number: 6 (lower is better)
Translates to: QLLLRYHSFHLSLPN*KTPSRHSQIVLWKV
Trigger: AACTTTCCACAATACAATCTGCGAATGCCTCGAAGGAGTCTTCAAATTCGGCAGACTCAGATGAAAAGAGTGATAGCGAAGAAGAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358477.6
ENST00000379673.2
CDS TCA 72 bp TTAAGAATGATTTCCAGTTCTCTGGAACTTCTCGTCTaGTCCAGTAGGTCCTTAGCAAATTGTTTGCACTGC +
Preference number: 6 (lower is better)
Translates to: LRMISSSLELLV*SSRSLANCLHC
Trigger: GCAGTGCAAACAATTTGCTAAGGACCTACTGGATCAGACGAGAAGTTCCAGAGAACTGGAAATCATTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355779.6
ENST00000358477.6
ENST00000379673.2
ENST00000379705.8
ENST00000426868.6
ENST00000488717.5
ENST00000625583.2
CDS GCA 72 bp AAATTGATGAGCCCAAATATTGACCAAAACAGGGACTaGAGTGTCTCAAATAACCTTTACAAATGCAACAAT +
Preference number: 6 (lower is better)
Translates to: KLMSPNIDQNRD*SVSNNLYKCNN
Trigger: ATTGTTGCATTTGTAAAGGTTATTTGAGACACTGCAGTCCCTGTTTTGGTCAATATTTGGGCTCATCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426868.6