RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRNT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000072756

Ensembl transcript IDs: ENST00000251607.11, ENST00000280591.10, ENST00000339437.11, ENST00000397779.3, ENST00000402675.5, ENST00000413000.1, ENST00000420393.5, ENST00000434583.5, ENST00000465998.1, ENST00000469632.1, ENST00000650755.1, ENST00000650814.1, ENST00000650839.1, ENST00000651093.1, ENST00000651316.1, ENST00000651352.1, ENST00000651591.1, ENST00000652340.1

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTaGCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTG +
Preference number: 1 (lower is better)
Translates to: ERQSRIPETSTWVAW*HYPVESDMSGSMSL
Trigger: CAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR CCA 90 bp CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTaGTGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCA +
Preference number: 1 (lower is better)
Translates to: HERQSRIPETSTWVA*CHYPVESDMSGSMS
Trigger: TGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR TCA 90 bp GTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACAACATTaGGAATCAACACTAATGAAACTGTGGCAACAGCAAGAAGCTACT +
Preference number: 1 (lower is better)
Translates to: VMLLCGCFSNISRQH*ESTLMKLWQQQEAT
Trigger: AGTAGCTTCTTGCTGTTGCCACAGTTTCATTAGTGTTGATTCTCAATGTTGTCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
3UTR TCA 90 bp AATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGAAATCATTGTaGCAGAAAAATATCAACCACATACTGAAGCATAGCTTGCTAGAA +
Preference number: 1 (lower is better)
Translates to: NPMTSPGSACIKKSL*QKNINHILKHSLLE
Trigger: TTCTAGCAAGCTATGCTTCAGTATGTGGTTGATATTTTTCTGTCACAATGATTTCTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR TCA 90 bp GGTGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTaGTGGGACATGAAGACATCTTTGGAAATGATGAGATTATTTCCT +
Preference number: 1 (lower is better)
Translates to: GAIILWNLICLVACH*WDMKTSLEMMRLFP
Trigger: AGGAAATAATCTCATCATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR TCA 90 bp AACCACATACTGAAGCATAGCTTGCTAGAACAAATCCTGTACATATaGATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGC +
Preference number: 1 (lower is better)
Translates to: NHILKHSLLEQILYI*MPATGDTFSIHILC
Trigger: GCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTTCTAGCAAGCTATGCTTCAGTATGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR GCA 90 bp AATGATGAGATTATTTCCTGTATGCAGTCATTTCTGAGGCTTTCTTaGATCATAGCCCCTGTGACATTTCCTCTTAGAAATATTACACTC +
Preference number: 1 (lower is better)
Translates to: NDEIISCMQSFLRLS*IIAPVTFPLRNITL
Trigger: GAGTGTAATATTTCTAAGAGGAAATGTCACAGGGGCTATGATGCAAGAAAGCCTCAGAAATGACTGCATACAGGAAATAATCTCATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR-3UTR TCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATACTCAAGTTAATCCCATaGCTTCCCCAGGCTCTGCAT +
Preference number: 2 (lower is better)
Translates to: LNSDPQVNPMTSPGSACILKLIP*LPQALH
Trigger: ATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAG...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR TCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATACAAATCCTGTACATATaGATGCCAGCAACTGGGGAC +
Preference number: 2 (lower is better)
Translates to: LNSDPQVNPMTSPGSACIQILYI*MPATGD
Trigger: GTCCCCAGTTGCTGGCATTCATATGTACAGGATTTG...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp CCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACAAACAGGTTTTGCAACGTaGACAATGGAGGCAACTCCT +
Preference number: 2 (lower is better)
Translates to: PTGFVMLLCGCFSNISRQTGFAT*TMEATP
Trigger: AGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGT...TTGTCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
3UTR-3UTR CCA 90 bp AATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGGCCACTTACAGGAAATaGAGGAATGGACCACTGCTG +
Preference number: 2 (lower is better)
Translates to: NSDPQVNPMTSPGSACIKATYRK*RNGPLL
Trigger: CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGC...CTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR TCA 90 bp AATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGCAAATCCTGTACATATaGATGCCAGCAACTGGGGAC +
Preference number: 2 (lower is better)
Translates to: NSDPQVNPMTSPGSACIKQILYI*MPATGD
Trigger: GTCCCCAGTTGCTGGCATTCATATGTACAGGATTTG...CTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR TCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAATGCCCACTTTTCTaGTGTCATGGCCACTTACAG +
Preference number: 2 (lower is better)
Translates to: LNSDPQVNPMTSPGSACIKCPLF*CHGHLQ
Trigger: CTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTT...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR TCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCAAATGCCCACTTTTCTaGTGTCATGGCCACTTACAG +
Preference number: 2 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCKCPLF*CHGHLQ
Trigger: CTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTT...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATATCCTGTACATATGAATaGCAGCAACTGGGGACACAT +
Preference number: 2 (lower is better)
Translates to: LNSDPQVNPMTSPGSACISCTYE*QQLGTH
Trigger: ATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGA...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCTCCTGTACATATGAATaGCAGCAACTGGGGACACAT +
Preference number: 2 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCSCTYE*QQLGTH
Trigger: ATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGA...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATATCCAGCCAAGCCTTTTaGATTTTCTGCAATTGCTTC +
Preference number: 2 (lower is better)
Translates to: LNSDPQVNPMTSPGSACISSQAF*IFCNCF
Trigger: GAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGA...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
3UTR-3UTR CCA 90 bp ACTGTGGCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTTTGCAACGTGCACAATaGAGGCAACTCCTATTTCCT +
Preference number: 2 (lower is better)
Translates to: TVATARSYWHLAKAISYALQRAQ*RQLLFP
Trigger: AGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAA...AGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGCCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
3UTR-3UTR GCA 90 bp AGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGATCCTGTACATATGAATaGCAGCAACTGGGGACACAT +
Preference number: 2 (lower is better)
Translates to: RNAHFSDVMATYRKWRNGSCTYE*QQLGTH
Trigger: ATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGA...TCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp GCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGGGACAGGTTTTGCAACGTaGACAATGGAGGCAACTCCT +
Preference number: 2 (lower is better)
Translates to: AIYLWHVPKKPSSNFKNGTGFAT*TMEATP
Trigger: AGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGT...CCCATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
3UTR-3UTR GCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCTGCATTTTCTGCAATTaGTTCCAAAGTCTCAGGATC +
Preference number: 2 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCCIFCN*FQSLRI
Trigger: GATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCA...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATATGCATTTTCTGCAATTaGTTCCAAAGTCTCAGGATC +
Preference number: 2 (lower is better)
Translates to: LNSDPQVNPMTSPGSACICIFCN*FQSLRI
Trigger: GATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCA...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp CCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 2 (lower is better)
Translates to: PTFLMSWPLTGNGGMDHCVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...GCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CCA 90 bp GAAACTGTGGCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATTTGCAACGTGCACAATaGAGGCAACTCCTATTTCCT +
Preference number: 2 (lower is better)
Translates to: ETVATARSYWHLAKAISYLQRAQ*RQLLFP
Trigger: AGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAA...ATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGCCACAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
3UTR-3UTR TCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGCTCAAGTTAATCCCATaGCTTCCCCAGGCTCTGCAT +
Preference number: 2 (lower is better)
Translates to: MPATGDTFSIHILCKLTWLKLIP*LPQALH
Trigger: ATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAG...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR TCA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAACTGGTAGCATGTCATTaGTGGGACATGAAGACATCT +
Preference number: 2 (lower is better)
Translates to: SRIPETSTWVAWCHYPVELVACH*WDMKTS
Trigger: AGATGTCTTCATGTCCCATCAATGACATGCTACCAG...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR-3UTR GCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCTTACCAGAAATGCTCTaGTTTTTAGTAGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCLPEML*FLVAIS
Trigger: ACTGATGGCTACTAAAAAGCAGAGCATTTCTGGTAA...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp AGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGATCCAGCCAAGCCTTTTaGATTTTCTGCAATTGCTTC +
Preference number: 2 (lower is better)
Translates to: RNAHFSDVMATYRKWRNGSSQAF*IFCNCF
Trigger: GAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGA...TCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGTCCAGCCAAGCCTTTTaGATTTTCTGCAATTGCTTC +
Preference number: 2 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMSSQAF*IFCNCF
Trigger: GAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGA...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 2 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp AGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGAACATACACGAGTAGTTaGATCAGGTTCCCTAGAATC +
Preference number: 2 (lower is better)
Translates to: RNAHFSDVMATYRKWRNGTYTSS*IRFPRI
Trigger: GATTCTAGGGAACCTGATGCAACTACTCGTGTATGT...TCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGCGTTCCGCATCTTTCTaGCAGTCAGTTGTAAATTCT +
Preference number: 2 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMRSASF*QSVVNS
Trigger: AGAATTTACAACTGACTGGCAGAAAGATGCGGAACG...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650755.1
ENST00000651591.1
3UTR-3UTR CCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGGCCACTTACAGGAAATaGAGGAATGGACCACTGCTG +
Preference number: 2 (lower is better)
Translates to: MPATGDTFSIHILCKLTWATYRK*RNGPLL
Trigger: CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGC...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR TCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGCAAATCCTGTACATATaGATGCCAGCAACTGGGGAC +
Preference number: 2 (lower is better)
Translates to: MPATGDTFSIHILCKLTWQILYI*MPATGD
Trigger: GTCCCCAGTTGCTGGCATTCATATGTACAGGATTTG...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR TCA 90 bp TGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATAGTACAAAGATGTTATaGCTGGCAGAAATGCTCTGC +
Preference number: 2 (lower is better)
Translates to: CHYPVESDMSGSMSLMGHSTKML*LAEMLC
Trigger: GCAGAGCATTTCTGCCAGTCATAACATCTTTGTACT...ATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR-3UTR TCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACAAACATCTCCTTCATTTaGGTAGGGGTAGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTNISFI*VGVAVV
Trigger: CACCACTGCTACCCCTACTCAAATGAAGGAGATGTT...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651591.1
3UTR-3UTR GCA 90 bp AGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGATGCATTTTCTGCAATTaGTTCCAAAGTCTCAGGATC +
Preference number: 2 (lower is better)
Translates to: RNAHFSDVMATYRKWRNGCIFCN*FQSLRI
Trigger: GATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCA...TCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
3UTR-3UTR TCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGAAATGCCCACTTTTCTaGTGTCATGGCCACTTACAG +
Preference number: 2 (lower is better)
Translates to: MPATGDTFSIHILCKLTWKCPLF*CHGHLQ
Trigger: CTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTT...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp CTAAAACAATCTAAAAGAATCAACATATTCTGGGCCATTTATCTCTGGCACGTAGAACCCGAGCATGTGTaGTTTAAAAGCTCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: LKQSKRINIFWAIYLWHVEPEHV*FKSSPG
Trigger: ACCTGGGGAGCTTTTAAAGCACACATGCTCGGGTTC...TACGTGCCAGAGATAAATGGCCCAGAATATGTTGATTCTTTTAGATTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
3UTR-3UTR GCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATTTTCTGAGGCTTTCTTaGATCATAGCCCCTGTGACA +
Preference number: 2 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNFLRLS*IIAPVT
Trigger: TGTCACAGGGGCTATGATGCAAGAAAGCCTCAGAAA...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR-3UTR GCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATCGTTCCGCATCTTTCTaGCAGTCAGTTGTAAATTCT +
Preference number: 2 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNRSASF*QSVVNS
Trigger: AGAATTTACAACTGACTGGCAGAAAGATGCGGAACG...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650755.1
ENST00000651591.1
3UTR CAA 90 bp TGGTGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATaGATGGGACATGAAGACATCTTTGGAAATGATGAGATTATTTCC +
Preference number: 2 (lower is better)
Translates to: WCHYPVESDMSGSMS*MGHEDIFGNDEIIS
Trigger: GGAAATAATCTCATCATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR-3UTR GCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGGACTTCCCCAGGCTCTaGATGCATAAAGAAATCATT +
Preference number: 2 (lower is better)
Translates to: MPATGDTFSIHILCKLTWDFPRL*MHKEII
Trigger: AATGATTTCTTTATGCATGCAGAGCCTGGGGAAGTC...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATCTGGCAGAAATGCTCTaGTTTTTAGTAGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNLAEML*FLVAIS
Trigger: ACTGATGGCTACTAAAAAGCAGAGCATTTCTGCCAG...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR-3UTR GCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATCCAGCCAAGCCTTTTaGATTTTCTGCAATTGCTTC +
Preference number: 2 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTSSQAF*IFCNCF
Trigger: GAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGA...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp CTAAAACAATCTAAAAGAATCAACATATTCTGGGCCATTTATCTCTGGCACGTAATGCTACTGTGTGGCTaGTTTAGCAACATCAGCAGA +
Preference number: 2 (lower is better)
Translates to: LKQSKRINIFWAIYLWHVMLLCG*FSNISR
Trigger: TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCAT...TACGTGCCAGAGATAAATGGCCCAGAATATGTTGATTCTTTTAGATTGTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
3UTR-3UTR GCA 90 bp GGGCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGCTAATAGATAGCCAGTaGTGTATAGGTCATATTTCT +
Preference number: 2 (lower is better)
Translates to: GPFISGTYLKSHHPISRMLIDSQ*CIGHIS
Trigger: AGAAATATGACCTATACAGCACTGGCTATCTATTAG...CATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
3UTR-3UTR GCA 90 bp GCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGGGCTAATAGATAGCCAGTaGTGTATAGGTCATATTTCT +
Preference number: 2 (lower is better)
Translates to: AIYLWHVPKKPSSNFKNGLIDSQ*CIGHIS
Trigger: AGAAATATGACCTATACAGCACTGGCTATCTATTAG...CCCATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
3UTR-3UTR GCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTTCCAGCCAAGCCTTTTaGATTTTCTGCAATTGCTTC +
Preference number: 2 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLSSQAF*IFCNCF
Trigger: GAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGA...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
3UTR-3UTR CCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGGCCATCAAAACCTCTTaGCTGTGTTTGAACTTGAAT +
Preference number: 2 (lower is better)
Translates to: MPATGDTFSIHILCKLTWAIKTS*LCLNLN
Trigger: ATTCAAGTTCAAACACAGCCAAGAGGTTTTGATGGC...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652340.1
3UTR-3UTR GCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTACCAGAAATGCTCTaGTTTTTAGTAGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTLPEML*FLVAIS
Trigger: ACTGATGGCTACTAAAAAGCAGAGCATTTCTGGTAA...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTTACCAGAAATGCTCTaGTTTTTAGTAGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: MPATGDTFSIHILCKLTWLPEML*FLVAIS
Trigger: ACTGATGGCTACTAAAAAGCAGAGCATTTCTGGTAA...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTTGCATTTTCTGCAATTaGTTCCAAAGTCTCAGGATC +
Preference number: 2 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLCIFCN*FQSLRI
Trigger: GATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCA...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACAGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 2 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 2 (lower is better)
Translates to: PATGDTFSIHILCKLTWSVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACAAGTAGTCAAATAAAGTaGCATCAAAACCTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTSSQIK*HQNLLA
Trigger: AGCCAAGAGGTTTTGATGGCACTTTATTTGACTACT...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652340.1
3UTR-3UTR CCA 90 bp CTAAAACAATCTAAAAGAATCAACATATTCTGGGCCATTTATCTCTGGCACGTAACAGCAAGAAGCTACTaGCACTTAGCTAAAGCCATT +
Preference number: 2 (lower is better)
Translates to: LKQSKRINIFWAIYLWHVTARSY*HLAKAI
Trigger: AATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGT...TACGTGCCAGAGATAAATGGCCCAGAATATGTTGATTCTTTTAGATTGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
3UTR-3UTR GCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCATTACCAGAAATGCTCTaGTTTTTAGTAGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: CTYECQQLGTHLVFTFYALPEML*FLVAIS
Trigger: ACTGATGGCTACTAAAAAGCAGAGCATTTCTGGTAA...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR GCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTTTACCAGAAATGCTCTaGTTTTTAGTAGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLLPEML*FLVAIS
Trigger: ACTGATGGCTACTAAAAAGCAGAGCATTTCTGGTAA...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp CCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCCACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 3 (lower is better)
Translates to: PTFLMSWPLTGNGGMDHCHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...GCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp GAAACTGTGGCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATCCTTCCAGACAGGTTTaGCAACGTGCACAATGGAGG +
Preference number: 3 (lower is better)
Translates to: ETVATARSYWHLAKAISYPSRQV*QRAQWR
Trigger: CCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGG...ATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGCCACAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
3UTR-3UTR CAA 90 bp CCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCAAAATAAGACCCTTGTaGTTCTACAGAGGTCCCCTA +
Preference number: 3 (lower is better)
Translates to: PTFLMSWPLTGNGGMDHCKIRPL*FYRGPL
Trigger: TAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTT...GCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 3 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCCACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 3 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp CCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCTTTTCTCCTCTGTaGTTTATCATCCGAATCCCA +
Preference number: 3 (lower is better)
Translates to: PTFLMSWPLTGNGGMDHCCFSPL*FIIRIP
Trigger: TGGGATTCGGATGATAAACAACAGAGGAGAAAAGCA...GCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651591.1
3UTR-3UTR CAA 90 bp CCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTTGCATTTTCTGCAATaGCTTCCAAAGTCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: PTFLMSWPLTGNGGMDHCLHFLQ*LPKSQD
Trigger: ATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAA...GCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp CCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCGGTTTTTCTCCTCTTTaGCGATCTTCAACCTCAAAT +
Preference number: 3 (lower is better)
Translates to: PTFLMSWPLTGNGGMDHCGFSPL*RSSTSN
Trigger: ATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACC...GCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp AATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGAAAATAAGACCCTTGTaGTTCTACAGAGGTCCCCTA +
Preference number: 3 (lower is better)
Translates to: NSDPQVNPMTSPGSACIKKIRPL*FYRGPL
Trigger: TAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTT...CTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp AGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 3 (lower is better)
Translates to: RNAHFSDVMATYRKWRNGHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...TCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAATACTGAAGCATAGCTaGCTAGAACAAATCCTGTAC +
Preference number: 3 (lower is better)
Translates to: LNSDPQVNPMTSPGSACIILKHS*LEQILY
Trigger: GTACAGGATTTGTTCTAGCAAGCTATGCTTCAGTAT...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCTTGCATTTTCTGCAATaGCTTCCAAAGTCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCLHFLQ*LPKSQD
Trigger: ATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAA...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGAAAATAAGACCCTTGTaGTTCTACAGAGGTCCCCTA +
Preference number: 3 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMKIRPL*FYRGPL
Trigger: TAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTT...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp AATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGTTGCATTTTCTGCAATaGCTTCCAAAGTCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: NSDPQVNPMTSPGSACIKLHFLQ*LPKSQD
Trigger: ATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAA...CTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp AATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGGGTTTTTCTCCTCTTTaGCGATCTTCAACCTCAAAT +
Preference number: 3 (lower is better)
Translates to: NSDPQVNPMTSPGSACIKGFSPL*RSSTSN
Trigger: ATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACC...CTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR TCA 72 bp CTGTGTGGCTGCTTTAGCAACATCAGCAGACAACATTaGGAATCAACACTAATGAAACTGTGGCAACAGCAA +
Preference number: 3 (lower is better)
Translates to: LCGCFSNISRQH*ESTLMKLWQQQ
Trigger: TTGCTGTTGCCACAGTTTCATTAGTGTTGATTCTCAATGTTGTCTGCTGATGTTGCTAAAGCAGCCACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
3UTR GCA 72 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTaGCATTATCCTGTGGAATCTGATATGTCTGGTAGC +
Preference number: 3 (lower is better)
Translates to: SRIPETSTWVAW*HYPVESDMSGS
Trigger: GCTACCAGACATATCAGATTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR CCA 72 bp CAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTaGTGCCATTATCCTGTGGAATCTGATATGTCTGGT +
Preference number: 3 (lower is better)
Translates to: QSRIPETSTWVA*CHYPVESDMSG
Trigger: ACCAGACATATCAGATTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR-3UTR CAA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATATTTCTGAGGCTTTCTaGCATCATAGCCCCTGTGAC +
Preference number: 3 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNISEAF*HHSPCD
Trigger: GTCACAGGGGCTATGATGCAAGAAAGCCTCAGAAAT...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR-3UTR CAA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGTTGCATTTTCTGCAATaGCTTCCAAAGTCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMLHFLQ*LPKSQD
Trigger: ATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAA...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
3UTR TCA 72 bp CTGAAGCATAGCTTGCTAGAACAAATCCTGTACATATaGATGCCAGCAACTGGGGACACATTTAGTATTCAC +
Preference number: 3 (lower is better)
Translates to: LKHSLLEQILYI*MPATGDTFSIH
Trigger: GTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTTCTAGCAAGCTATGCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCACACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 3 (lower is better)
Translates to: PATGDTFSIHILCKLTWSHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACACACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 3 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGAAAATAAGACCCTTGTaGTTCTACAGAGGTCCCCTA +
Preference number: 3 (lower is better)
Translates to: MPATGDTFSIHILCKLTWKIRPL*FYRGPL
Trigger: TAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTT...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTCACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 3 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp GGGCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGCATCAGCAGACAACATaGAGAATCAACACTAATGAA +
Preference number: 3 (lower is better)
Translates to: GPFISGTYLKSHHPISRMHQQTT*RINTNE
Trigger: TTCATTAGTGTTGATTCTCAATGTTGTCTGCTGATG...CATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
3UTR TCA 72 bp ATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTaGTGGGACATGAAGACATCTTTGGAAATGATGAGA +
Preference number: 3 (lower is better)
Translates to: ILWNLICLVACH*WDMKTSLEMMR
Trigger: TCTCATCATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
3UTR-3UTR CAA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAAAATAAGACCCTTGTaGTTCTACAGAGGTCCCCTA +
Preference number: 3 (lower is better)
Translates to: CTYECQQLGTHLVFTFYAKIRPL*FYRGPL
Trigger: TAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTT...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCATTGCATTTTCTGCAATaGCTTCCAAAGTCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: PATGDTFSIHILCKLTWSLHFLQ*LPKSQD
Trigger: ATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAA...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACAGGTTTTTCTCCTCTTTaGCGATCTTCAACCTCAAAT +
Preference number: 3 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTGFSPL*RSSTSN
Trigger: ATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACC...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAGGTTTTTCTCCTCTTTaGCGATCTTCAACCTCAAAT +
Preference number: 3 (lower is better)
Translates to: PATGDTFSIHILCKLTWSGFSPL*RSSTSN
Trigger: ATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACC...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
3UTR-3UTR CAA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCATGCCATCAAAACCTCTaGGCTGTGTTTGAACTTGAA +
Preference number: 3 (lower is better)
Translates to: CTYECQQLGTHLVFTFYACHQNL*AVFELE
Trigger: TTCAAGTTCAAACACAGCCAAGAGGTTTTGATGGCA...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652340.1
3UTR CCA 72 bp TCTAAAAGAATCAACATATTCTGGGCCATTTATCTCTaGCACGTACCTAAAAAGCCATCATCCAATTTCAAG +
Preference number: 3 (lower is better)
Translates to: SKRINIFWAIYL*HVPKKPSSNFK
Trigger: CTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCCAGAATATGTTGATTCTTTTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp GCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCGAGGACCGGGCGCGGTaGCGCCTCTGGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ATARSYWHLAKAISYAPSEDRAR*RLWPTA
Trigger: TGCTGTGGGCCAGAGGCGCCACCGCGCCCGGTCCTC...GGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp TTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTGCGCGGTGGCGCCTCTaGCCCACAGCAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLCSFQTGFATCTMEATPARWRL*PTAGRK
Trigger: CTTCCTTCCTGCTGTGGGCCAGAGGCGCCACCGCGC...AGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp AGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTTTGGAGGACCGGGCGCGGTaGCGCCTCTGGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SYWHLAKAISYAPSRQVLEDRAR*RLWPTA
Trigger: TGCTGTGGGCCAGAGGCGCCACCGCGCCCGGTCCTC...CAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp GCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCCGGTCGCCGGAAACGTaGCGGGGACACGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: ATARSYWHLAKAISYAPSRSPET*RGHDLR
Trigger: GCGGAGGTCGTGTCCCCGCCACGTTTCCGGCGACCG...GGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp CCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTTCCTTCTCGGTCGCCGGAAACGTaGCGGGGACACGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: PSRQVLQRAQWRQLLFPSRSPET*RGHDLR
Trigger: GCGGAGGTCGTGTCCCCGCCACGTTTCCGGCGACCG...AGAAGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp AAGCCATTTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCGGCGACAAGGCCCAGTaGAAAAGCGTCTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: KPFPMLLPDRFCNVHNGGGDKAQ*KSVSGP
Trigger: CGGCCCCGAGACGCTTTTTCACTGGGCCTTGTCGCC...GCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp GCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCGGCGACAAGGCCCAGTaGAAAAGCGTCTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: ATARSYWHLAKAISYAPSGDKAQ*KSVSGP
Trigger: CGGCCCCGAGACGCTTTTTCACTGGGCCTTGTCGCC...GGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR GCA 90 bp GCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCCAAGGAATCCGCGCCTaGGGTCGCCGGAAACGTGGC +
Preference number: 4 (lower is better)
Translates to: ATARSYWHLAKAISYAPSQGIRA*GRRKRG
Trigger: GCCACGTTTCCGGCGACCGCAGGCGCGGATTCCTTG...GGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp CCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTTCCTTCTCCCCACGCCGGGTGCTaGCGACAAGGCCCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: PSRQVLQRAQWRQLLFPSPHAGC*RQGPVK
Trigger: TTTCACTGGGCCTTGTCGCCAGCACCCGGCGTGGGG...AGAAGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp TGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTTCCCGGAGGGGAAAGTGCTaGGGGAAGCCAAGGAATCCG +
Preference number: 4 (lower is better)
Translates to: CSFQTGFATCTMEATPISRRGKC*GKPRNP
Trigger: CGGATTCCTTGGCTTCCCTCAGCACTTTCCCCTCCG...GGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp CAGCAGACAACATTGAGAATCAACACTAATGAAACTGTGGCAACAGCAAGAAGCCCAACTCTGCCCCTCTaGGCGGCGCGCGCCCGCTTA +
Preference number: 4 (lower is better)
Translates to: QQTTLRINTNETVATARSPTLPL*AARARL
Trigger: TAAGCGGGCGCGCGCCGCTCAGAGGGGCAGAGTTGG...GCTTCTTGCTGTTGCCACAGTTTCATTAGTGTTGATTCTCAATGTTGTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420393.5
CDS-3UTR GCA 90 bp TGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTTCCGCGTCGGGGCTATTTTaGCCACTGCTGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: CSFQTGFATCTMEATPISASGLF*PLLRRP
Trigger: AGGCCTCCTCAGCAGTGGGCAAAATAGCCCCGACGC...GGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp ACTGTGGCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCCCACGCCGGGTGCTaGCGACAAGGCCCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: TVATARSYWHLAKAISYAPHAGC*RQGPVK
Trigger: TTTCACTGGGCCTTGTCGCCAGCACCCGGCGTGGGG...AGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp ACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGATCCCGGCAGGCCACGTaGGGCGGAAAGACCCACTCA +
Preference number: 4 (lower is better)
Translates to: TARSYWHLAKAISYAPSRSRQAT*GGKTHS
Trigger: TGAGTGGGTCTTTCCGCCCCACGTGGCCTGCCGGGA...TCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR GCA 90 bp CCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACAAGCGTCGGGGCTATTTTaGCCACTGCTGAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PTGFVMLLCGCFSNISRQASGLF*PLLRRP
Trigger: AGGCCTCCTCAGCAGTGGGCAAAATAGCCCCGACGC...TTGTCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR GCA 90 bp GAAACTGTGGCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATCAAGGAATCCGCGCCTaGGGTCGCCGGAAACGTGGC +
Preference number: 4 (lower is better)
Translates to: ETVATARSYWHLAKAISYQGIRA*GRRKRG
Trigger: GCCACGTTTCCGGCGACCGCAGGCGCGGATTCCTTG...ATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGCCACAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp GCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCTATTTTGCCCACTGCTaGGGAGGCCTCTCGCCACGT +
Preference number: 4 (lower is better)
Translates to: ATARSYWHLAKAISYAPSYFAHC*GGLSPR
Trigger: ACGTGGCGAGAGGCCTCCTCAGCAGTGGGCAAAATA...GGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp TGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTCGGAGGGGAAAGTGCTaGGGGAAGCCAAGGAATCCG +
Preference number: 4 (lower is better)
Translates to: WHLAKAISYAPSRQVLQRRRGKC*GKPRNP
Trigger: CGGATTCCTTGGCTTCCCTCAGCACTTTCCCCTCCG...ACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp CCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACAAGGGCTTCAGGCAGTATaGGAGGGATGCGGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: PTGFVMLLCGCFSNISRQGLQAV*EGCGVL
Trigger: TAGAACCCCGCATCCCTCTCATACTGCCTGAAGCCC...TTGTCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR GCA 90 bp CAGACAACATTGAGAATCAACACTAATGAAACTGTGGCAACAGCAAGAAGCTACTCACGCCACCAACTCTaGCCCTCTGAGCGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: QTTLRINTNETVATARSYSRHQL*PSERRA
Trigger: CGCGCGCCGCTCAGAGGGGCAGAGTTGGTGGCGTGA...GTAGCTTCTTGCTGTTGCCACAGTTTCATTAGTGTTGATTCTCAATGTTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420393.5
CDS-3UTR CCA 90 bp CAGACAACATTGAGAATCAACACTAATGAAACTGTGGCAACAGCAAGAAGCTACGCGCGGTGGCGCCTCTaGCCCACAGCAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QTTLRINTNETVATARSYARWRL*PTAGRK
Trigger: CTTCCTTCCTGCTGTGGGCCAGAGGCGCCACCGCGC...GTAGCTTCTTGCTGTTGCCACAGTTTCATTAGTGTTGATTCTCAATGTTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp CCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACAAACTGGCCTGTGCCAATaGTACAGGCACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: PTGFVMLLCGCFSNISRQTGLCQ*YRHLSI
Trigger: GATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGT...TTGTCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp CCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTTCCTTCTACTGGCCTGTGCCAATaGTACAGGCACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: PSRQVLQRAQWRQLLFPSTGLCQ*YRHLSI
Trigger: GATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGT...AGAAGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp TCCTATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTACTTAGGAAAACGCTCTaGGGAACCCCAGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SYAPSRQVLQRAQWRQLLLRKTL*GTPALK
Trigger: TTTCAGGGCTGGGGTTCCCCAGAGCGTTTTCCTAAG...TAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CCA 90 bp TTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGGGAAAGTTCCACGGAAGCGGGTaGAGGAGCCGCGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: FISGTYLKSHHPISRMGKFHGSG*RSRASR
Trigger: CCGGGAAGCGCGGCTCCTCCACCCGCTTCCGTGGAA...CTTTCCCATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR TCA 90 bp CAGCAGACAACATTGAGAATCAACACTAATGAAACTGTGGCAACAGCAAGAAGCGCAGCAGCTCTCGAGTaGCCCCGGTGTAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: QQTTLRINTNETVATARSAAALE*PRCKPA
Trigger: TGCAGGTTTACACCGGGGTCACTCGAGAGCTGCTGC...GCTTCTTGCTGTTGCCACAGTTTCATTAGTGTTGATTCTCAATGTTGTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAGGCACCTCAGCATCTaGAGAGGCAGTCACCAACTA +
Preference number: 4 (lower is better)
Translates to: LNSDPQVNPMTSPGSACIRHLSI*RGSHQL
Trigger: TAGTTGGTGACTGCCTCTCCAGATGCTGAGGTGCCT...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CCA 90 bp TCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTTCCTTCTTCCAGGCACCTCAGCATCTaGAGAGGCAGTCACCAACTA +
Preference number: 4 (lower is better)
Translates to: SRQVLQRAQWRQLLFPSSRHLSI*RGSHQL
Trigger: TAGTTGGTGACTGCCTCTCCAGATGCTGAGGTGCCT...GGAAGAAGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp GCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCCCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: ATARSYWHLAKAISYAPSPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...GGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCCCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR CCA 90 bp ATTCCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGAATCTCCTCTGATTTCTaGCACACCGCGGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: IPTGFVMLLCGCFSNISRISSDF*HTAAFP
Trigger: AGGGAAGGCCGCGGTGTGCCAGAAATCAGAGGAGAT...TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR TCA 90 bp AATGAAACTGTGGCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCACTGGCCTGTGCCAATaGTACAGGCACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: NETVATARSYWHLAKAISTGLCQ*YRHLSI
Trigger: GATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGT...GGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGCCACAGTTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp CCCAGCCGACTGAAACATCTCCTTCATTTGAGTAGGGGTAGCAGTGGTGGCAAAAAATGCCCACTTTTCTaGTGTCATGGCCACTTACAG +
Preference number: 4 (lower is better)
Translates to: PSRLKHLLHLSRGSSGGKKCPLF*CHGHLQ
Trigger: CTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTT...TTTGCCACCACTGCTACCCCTACTCAAATGAAGGAGATGTTTCAGTCGGCTGGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651591.1
CDS-3UTR TCA 90 bp CCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCCAAATCCTGTACATATaGATGCCAGCAACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PTFLMSWPLTGNGGMDHCQILYI*MPATGD
Trigger: GTCCCCAGTTGCTGGCATTCATATGTACAGGATTTG...GCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp ATCAACATATTCTGGGCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCTATTTTGCCCACTGCTaGGGAGGCCTCTCGCCACGT +
Preference number: 4 (lower is better)
Translates to: INIFWAIYLWHVPKKPSSYFAHC*GGLSPR
Trigger: ACGTGGCGAGAGGCCTCCTCAGCAGTGGGCAAAATA...GGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCCAGAATATGTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR GCA 90 bp CCCAGCCGACTGAAACATCTCCTTCATTTGAGTAGGGGTAGCAGTGGTGGCAAATCCTGTACATATGAATaGCAGCAACTGGGGACACAT +
Preference number: 4 (lower is better)
Translates to: PSRLKHLLHLSRGSSGGKSCTYE*QQLGTH
Trigger: ATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGA...TTTGCCACCACTGCTACCCCTACTCAAATGAAGGAGATGTTTCAGTCGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651591.1
CDS-3UTR GCA 90 bp TTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTACAGGTTTTGCAACGTaGACAATGGAGGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: FLCSFQTGFATCTMEATPTGFAT*TMEATP
Trigger: AGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGT...AGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp ATTCCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGAAGGCACCTCAGCATCTaGAGAGGCAGTCACCAACTA +
Preference number: 4 (lower is better)
Translates to: IPTGFVMLLCGCFSNISRRHLSI*RGSHQL
Trigger: TAGTTGGTGACTGCCTCTCCAGATGCTGAGGTGCCT...TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGGCCACTTACAGGAAATaGAGGAATGGACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLATYRK*RNGPLL
Trigger: CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGC...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAGCCACTTACAGGAAATaGAGGAATGGACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LNSDPQVNPMTSPGSACIATYRK*RNGPLL
Trigger: CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGC...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCGCCACTTACAGGAAATaGAGGAATGGACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCATYRK*RNGPLL
Trigger: CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGC...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CCA 90 bp ACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGATGTCATGGTCACAGGTaGGTATCACCCTACTTCCCC +
Preference number: 4 (lower is better)
Translates to: TARSYWHLAKAISYAPSRCHGHR*VSPYFP
Trigger: GGGGAAGTAGGGTGATACCCACCTGTGACCATGACA...TCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CCA 90 bp AAGCCATTTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCCTCCAAAACTTGTCATaGTCACAGGTGGGTATCACC +
Preference number: 4 (lower is better)
Translates to: KPFPMLLPDRFCNVHNGGLQNLS*SQVGIT
Trigger: GGTGATACCCACCTGTGACCATGACAAGTTTTGGAG...GCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR TCA 90 bp CCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACAATCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: PTGFVMLLCGCFSNISRQSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...TTGTCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATATCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LNSDPQVNPMTSPGSACISFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR TCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR TCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR TCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGAACATCTCCTTCATTTaGGTAGGGGTAGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLNISFI*VGVAVV
Trigger: CACCACTGCTACCCCTACTCAAATGAAGGAGATGTT...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR TCA 90 bp CCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCAAATGCCCACTTTTCTaGTGTCATGGCCACTTACAG +
Preference number: 4 (lower is better)
Translates to: PTFLMSWPLTGNGGMDHCKCPLF*CHGHLQ
Trigger: CTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTT...GCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp AATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGCTCAAGTTAATCCCATaGCTTCCCCAGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: NSDPQVNPMTSPGSACIKLKLIP*LPQALH
Trigger: ATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAG...CTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTCCTGTACATATGAATaGCAGCAACTGGGGACACAT +
Preference number: 4 (lower is better)
Translates to: PTFLMSWPLTGNGGMDHCSCTYE*QQLGTH
Trigger: ATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGA...GCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CAGACAACATTGAGAATCAACACTAATGAAACTGTGGCAACAGCAAGAAGCTACCCCTACTTCCCCACCTaGACTCGAGGATTCACGACC +
Preference number: 4 (lower is better)
Translates to: QTTLRINTNETVATARSYPYFPT*TRGFTT
Trigger: GGTCGTGAATCCTCGAGTGCAGGTGGGGAAGTAGGG...GTAGCTTCTTGCTGTTGCCACAGTTTCATTAGTGTTGATTCTCAATGTTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CCA 90 bp AGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: RNAHFSDVMATYRKWRNGPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...TCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR CCA 90 bp TGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTTCCTTGCAACGTGCACAATaGAGGCAACTCCTATTTCCT +
Preference number: 4 (lower is better)
Translates to: CSFQTGFATCTMEATPISLQRAQ*RQLLFP
Trigger: AGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAA...GGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp GGGCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGCTCGGTTTGGTGGTTTaGTCGGGGAGCATTACCACG +
Preference number: 4 (lower is better)
Translates to: GPFISGTYLKSHHPISRMLGLVV*SGSITT
Trigger: CGTGGTAATGCTCCCCGACCAAACCACCAAACCGAG...CATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR TCA 90 bp AATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: NSDPQVNPMTSPGSACIKSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...CTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR TCA 90 bp ACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGATCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: TARSYWHLAKAISYAPSRSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...TCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp GTAATTGTTCCGTGCTTTTCTCCTCTGTTGTTTATCATCCGAATCCCAGCCGACTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: VIVPCFSPLLFIIRIPADSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...GTCGGCTGGGATTCGGATGATAAACAACAGAGGAGAAAAGCACGGAACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651591.1
CDS-3UTR TCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGAAATGCCCACTTTTCTaGTGTCATGGCCACTTACAG +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLKCPLF*CHGHLQ
Trigger: CTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTT...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTTCCATTGTGAATAGATACTaGTTCGGAAGGCACAGCCTA +
Preference number: 4 (lower is better)
Translates to: CSFQTGFATCTMEATPISIVNRY*FGRHSL
Trigger: TAGGCTGTGCCTTCCGAAGCAGTATCTATTCACAAT...GGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR GCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGTCCTGTACATATGAATaGCAGCAACTGGGGACACAT +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLSCTYE*QQLGTH
Trigger: ATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGA...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp AGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTACAGGTTTTGCAACGTaGACAATGGAGGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: RSYWHLAKAISYAPSRQVTGFAT*TMEATP
Trigger: AGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGT...AACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR GCA 90 bp CCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTTCCTTCTATGCTACTGTGTGGCTaGTTTAGCAACATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PSRQVLQRAQWRQLLFPSMLLCG*FSNISR
Trigger: TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCAT...AGAAGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR GCA 90 bp CCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACAAATGCTACTGTGTGGCTaGTTTAGCAACATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PTGFVMLLCGCFSNISRQMLLCG*FSNISR
Trigger: TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCAT...TTGTCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp GGGCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGCCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: GPFISGTYLKSHHPISRMPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...CATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGCCACTTACAGGAAATaGAGGAATGGACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMATYRK*RNGPLL
Trigger: CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGC...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CCA 90 bp TTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTACAGCAAGAAGCTACTaGCACTTAGCTAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: FLCSFQTGFATCTMEATPTARSY*HLAKAI
Trigger: AATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGT...AGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp TCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTTCCTTCTTCCTGGGCCATTTATCTCTaGCACGTACCTAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SRQVLQRAQWRQLLFPSSWAIYL*HVPKKP
Trigger: TGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCCA...GGAAGAAGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp ATCAACATATTCTGGGCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCCAACCCTCGGTTTGGTaGTTTGGTCGGGGAGCATTA +
Preference number: 4 (lower is better)
Translates to: INIFWAIYLWHVPKKPSSQPSVW*FGRGAL
Trigger: TAATGCTCCCCGACCAAACCACCAAACCGAGGGTTG...GGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCCAGAATATGTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CCA 90 bp CCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACAATCTGCATCTCATTATTaGGCAGCGAGAATAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTGFVMLLCGCFSNISRQSASHY*AARISS
Trigger: GCTGCTTATTCTCGCTGCCCAATAATGAGATGCAGA...TTGTCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402675.5
3UTR CAA 72 bp GCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTTaGCAACGTGCACAATGGAGGCAACTCCTATTTCCT +
Preference number: 4 (lower is better)
Translates to: AKAISYAPSRQV*QRAQWRQLLFP
Trigger: AGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR TCA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR TCA 90 bp AGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGAAACATCTCCTTCATTTaGGTAGGGGTAGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RNAHFSDVMATYRKWRNGNISFI*VGVAVV
Trigger: CACCACTGCTACCCCTACTCAAATGAAGGAGATGTT...TCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR TCA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGAACATCTCCTTCATTTaGGTAGGGGTAGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMNISFI*VGVAVV
Trigger: CACCACTGCTACCCCTACTCAAATGAAGGAGATGTT...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR GCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCGTTCCGCATCTTTCTaGCAGTCAGTTGTAAATTCT +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLRSASF*QSVVNS
Trigger: AGAATTTACAACTGACTGGCAGAAAGATGCGGAACG...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650839.1
ENST00000651093.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGTCCAGCCAAGCCTTTTaGATTTTCTGCAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLSSQAF*IFCNCF
Trigger: GAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGA...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
CDS-3UTR GCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCTCCAGCCAAGCCTTTTaGATTTTCTGCAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCSSQAF*IFCNCF
Trigger: GAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGA...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGACATACACGAGTAGTTaGATCAGGTTCCCTAGAATC +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLTYTSS*IRFPRI
Trigger: GATTCTAGGGAACCTGATGCAACTACTCGTGTATGT...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp ATTCCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGAATGCTACTGTGTGGCTaGTTTAGCAACATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IPTGFVMLLCGCFSNISRMLLCG*FSNISR
Trigger: TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCAT...TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR GCA 90 bp GCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGGGGAACCCGAGCATGTGTaGTTTAAAAGCTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AIYLWHVPKKPSSNFKNGEPEHV*FKSSPG
Trigger: ACCTGGGGAGCTTTTAAAGCACACATGCTCGGGTTC...CCCATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp GAATCAACATATTCTGGGCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: ESTYSGPFISGTYLKSHHPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...ATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCCAGAATATGTTGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATCCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR CCA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAAGCCACTTACAGGAAATaGAGGAATGGACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SRIPETSTWVAWCHYPVEATYRK*RNGPLL
Trigger: CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGC...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CCA 90 bp AGCCATTTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAAGAATCAACATATTCTaGGCCATTTATCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SHFLCSFQTGFATCTMEARINIF*AIYLWH
Trigger: GTGCCAGAGATAAATGGCCCAGAATATGTTGATTCT...TGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAAATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATATCAAAACCTCTATCTTaGGAAGACAGACTACCTCCA +
Preference number: 4 (lower is better)
Translates to: LNSDPQVNPMTSPGSACISKPLS*EDRLPP
Trigger: TGGAGGTAGTCTGTCTTCCCAAGATAGAGGTTTTGA...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651316.1
CDS-3UTR TCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTACTGGCCTGTGCCAATaGTACAGGCACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLTGLCQ*YRHLSI
Trigger: GATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGT...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR TCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAACTGGCCTGTGCCAATaGTACAGGCACCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYATGLCQ*YRHLSI
Trigger: GATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGT...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR TCA 90 bp TGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: CHYPVESDMSGSMSLMGHSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...ATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR TCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATCTCAAGTTAATCCCATaGCTTCCCCAGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNLKLIP*LPQALH
Trigger: ATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAG...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp CCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTCAAAATTTTCTTCATaGAGCTGTCAGACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PTFLMSWPLTGNGGMDHCSKFSS*SCQTLQ
Trigger: CTGAAGAGTCTGACAGCTTCATGAAGAAAATTTTGA...GCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650755.1
CDS-3UTR GCA 90 bp ACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGAATTGTGAATAGATACTaGTTCGGAAGGCACAGCCTA +
Preference number: 4 (lower is better)
Translates to: TARSYWHLAKAISYAPSRIVNRY*FGRHSL
Trigger: TAGGCTGTGCCTTCCGAAGCAGTATCTATTCACAAT...TCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR GCA 90 bp AATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGCGTTCCGCATCTTTCTaGCAGTCAGTTGTAAATTCT +
Preference number: 4 (lower is better)
Translates to: NSDPQVNPMTSPGSACIKRSASF*QSVVNS
Trigger: AGAATTTACAACTGACTGGCAGAAAGATGCGGAACG...CTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGTGCATTTTCTGCAATTaGTTCCAAAGTCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLCIFCN*FQSLRI
Trigger: GATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCA...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
CDS-3UTR GCA 90 bp AATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGGACTTCCCCAGGCTCTaGATGCATAAAGAAATCATT +
Preference number: 4 (lower is better)
Translates to: NSDPQVNPMTSPGSACIKDFPRL*MHKEII
Trigger: AATGATTTCTTTATGCATGCAGAGCCTGGGGAAGTC...CTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp GGGCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGACAGGTTTTGCAACGTaGACAATGGAGGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: GPFISGTYLKSHHPISRMTGFAT*TMEATP
Trigger: AGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGT...CATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR GCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCAGTAGTCAAATAAAGTaGCATCAAAACCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCSSQIK*HQNPGS
Trigger: ACTGCCAGGGTTTTGATGGCACTTTATTTGACTACT...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651352.1
CDS-3UTR CCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAAGGCACCTCAGCATCTaGAGAGGCAGTCACCAACTA +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSRHLSI*RGSHQL
Trigger: TAGTTGGTGACTGCCTCTCCAGATGCTGAGGTGCCT...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGCCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: MPATGDTFSIHILCKLTWPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATCCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACACCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCACCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGCCACTTACAGGAAATaGAGGAATGGACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNATYRK*RNGPLL
Trigger: CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGC...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CCA 90 bp TCCTATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTATTCCTTCAGTTCTCATaGAAAGCATTTATACCTGTC +
Preference number: 4 (lower is better)
Translates to: SYAPSRQVLQRAQWRQLLFLQFS*KAFIPV
Trigger: GACAGGTATAAATGCTTTCCATGAGAACTGAAGGAA...TAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp TGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTACAGCAAGAAGCTACTaGCACTTAGCTAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: WHLAKAISYAPSRQVLQRTARSY*HLAKAI
Trigger: AATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGT...ACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp GAAACTGTGGCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATTGGGCCATTTATCTCTaGCACGTACCTAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: ETVATARSYWHLAKAISYWAIYL*HVPKKP
Trigger: TGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCCA...ATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGCCACAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCGCCATCAAAACCTCTTaGCTGTGTTTGAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCAIKTS*LCLNLN
Trigger: ATTCAAGTTCAAACACAGCCAAGAGGTTTTGATGGC...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652340.1
CDS-3UTR CCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATAACTTCATGTTAGGGTaGCGTCTGTGCCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNNFMLG*RLCQAL
Trigger: CAAGGCTTGGCACAGACGCCACCCTAACATGAAGTT...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651316.1
CDS-3UTR TCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR TCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATCAAATCCTGTACATATaGATGCCAGCAACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNQILYI*MPATGD
Trigger: GTCCCCAGTTGCTGGCATTCATATGTACAGGATTTG...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACACTCAAGTTAATCCCATaGCTTCCCCAGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTLKLIP*LPQALH
Trigger: ATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAG...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp CTAAAACAATCTAAAAGAATCAACATATTCTGGGCCATTTATCTCTGGCACGTATCTTGCAATCTCCTCTaGTTTCTGGCACACCGCGGC +
Preference number: 4 (lower is better)
Translates to: LKQSKRINIFWAIYLWHVSCNLL*FLAHRG
Trigger: GCCGCGGTGTGCCAGAAATCAGAGGAGATTGCAAGA...TACGTGCCAGAGATAAATGGCCCAGAATATGTTGATTCTTTTAGATTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR GCA 90 bp AATGAAACTGTGGCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCATTGTGAATAGATACTaGTTCGGAAGGCACAGCCTA +
Preference number: 4 (lower is better)
Translates to: NETVATARSYWHLAKAISIVNRY*FGRHSL
Trigger: TAGGCTGTGCCTTCCGAAGCAGTATCTATTCACAAT...GGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGCCACAGTTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR GCA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 4 (lower is better)
Translates to: LNSDPQVNPMTSPGSACIVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGTTACCAGAAATGCTCTaGTTTTTAGTAGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLLPEML*FLVAIS
Trigger: ACTGATGGCTACTAAAAAGCAGAGCATTTCTGGTAA...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp AAGCCATTTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCCTAATAGATAGCCAGTaGTGTATAGGTCATATTTCT +
Preference number: 4 (lower is better)
Translates to: KPFPMLLPDRFCNVHNGGLIDSQ*CIGHIS
Trigger: AGAAATATGACCTATACAGCACTGGCTATCTATTAG...GCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR GCA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAATTTCTGAGGCTTTCTTaGATCATAGCCCCTGTGACA +
Preference number: 4 (lower is better)
Translates to: SRIPETSTWVAWCHYPVEFLRLS*IIAPVT
Trigger: TGTCACAGGGGCTATGATGCAAGAAAGCCTCAGAAA...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR GCA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAAACTTGGGTAGCTTGGTaGCATTATCCTGTGGAATCT +
Preference number: 4 (lower is better)
Translates to: SRIPETSTWVAWCHYPVETWVAW*HYPVES
Trigger: AGATTCCACAGGATAATGGCACCAAGCTACCCAAGT...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCACCTACGGTTCAGCACTaGCCTGTGCCAATGATACAG +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYAPTVQH*PVPMIQ
Trigger: CTGTATCATTGGCACAGGCCAGTGCTGAACCGTAGG...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAGCCACTTACAGGAAATaGAGGAATGGACCACTGCTG +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSATYRK*RNGPLL
Trigger: CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGC...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CCA 90 bp CCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACAATTCCTTCAGTTCTCATaGAAAGCATTTATACCTGTC +
Preference number: 4 (lower is better)
Translates to: PTGFVMLLCGCFSNISRQFLQFS*KAFIPV
Trigger: GACAGGTATAAATGCTTTCCATGAGAACTGAAGGAA...TTGTCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp ATTCCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGAACACTAATGAAACTGTaGCAACAGCAAGAAGCTACT +
Preference number: 4 (lower is better)
Translates to: IPTGFVMLLCGCFSNISRTLMKL*QQQEAT
Trigger: AGTAGCTTCTTGCTGTTGCCACAGTTTCATTAGTGT...TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp TTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGGGAAAGCACTCGCATGCCACATaGTACTGTGATGACACTCTC +
Preference number: 4 (lower is better)
Translates to: FISGTYLKSHHPISRMGKHSHAT*YCDDTL
Trigger: GAGAGTGTCATCACAGTACCATGTGGCATGCGAGTG...CTTTCCCATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR TCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR TCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATAACATCTCCTTCATTTaGGTAGGGGTAGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNNISFI*VGVAVV
Trigger: CACCACTGCTACCCCTACTCAAATGAAGGAGATGTT...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR TCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGAACATCTCCTTCATTTaGGTAGGGGTAGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: MPATGDTFSIHILCKLTWNISFI*VGVAVV
Trigger: CACCACTGCTACCCCTACTCAAATGAAGGAGATGTT...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR TCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCACAAATCCTGTACATATaGATGCCAGCAACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSQILYI*MPATGD
Trigger: GTCCCCAGTTGCTGGCATTCATATGTACAGGATTTG...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCACTCAAGTTAATCCCATaGCTTCCCCAGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYALKLIP*LPQALH
Trigger: ATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAG...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTCTCAAGTTAATCCCATaGCTTCCCCAGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLLKLIP*LPQALH
Trigger: ATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAG...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGTGCATTTTCTGCAATTaGTTCCAAAGTCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMCIFCN*FQSLRI
Trigger: GATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCA...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAATCCAGCCAAGCCTTTTaGATTTTCTGCAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRIPETSTWVAWCHYPVESSQAF*IFCNCF
Trigger: GAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGA...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR GCA 90 bp TGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATACATACACGAGTAGTTaGATCAGGTTCCCTAGAATC +
Preference number: 4 (lower is better)
Translates to: CHYPVESDMSGSMSLMGHTYTSS*IRFPRI
Trigger: GATTCTAGGGAACCTGATGCAACTACTCGTGTATGT...ATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR GCA 90 bp AATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAGTTACCAGAAATGCTCTaGTTTTTAGTAGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: NSDPQVNPMTSPGSACIKLPEML*FLVAIS
Trigger: ACTGATGGCTACTAAAAAGCAGAGCATTTCTGGTAA...CTTTATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAACTGGCAGAAATGCTCTaGTTTTTAGTAGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: SRIPETSTWVAWCHYPVELAEML*FLVAIS
Trigger: ACTGATGGCTACTAAAAAGCAGAGCATTTCTGCCAG...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CCA 90 bp CTAAAACAATCTAAAAGAATCAACATATTCTGGGCCATTTATCTCTGGCACGTAAGGCACCTCAGCATCTaGAGAGGCAGTCACCAACTA +
Preference number: 4 (lower is better)
Translates to: LKQSKRINIFWAIYLWHVRHLSI*RGSHQL
Trigger: TAGTTGGTGACTGCCTCTCCAGATGCTGAGGTGCCT...TACGTGCCAGAGATAAATGGCCCAGAATATGTTGATTCTTTTAGATTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp AGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTTTCCTTCAGTTCTCATaGAAAGCATTTATACCTGTC +
Preference number: 4 (lower is better)
Translates to: RSYWHLAKAISYAPSRQVFLQFS*KAFIPV
Trigger: GACAGGTATAAATGCTTTCCATGAGAACTGAAGGAA...AACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp CCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGGGATTGCAACGTGCACAATaGAGGCAACTCCTATTTCCT +
Preference number: 4 (lower is better)
Translates to: PFISGTYLKSHHPISRMGLQRAQ*RQLLFP
Trigger: AGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAA...TCCCATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp GAATCAACATATTCTGGGCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATTTGCAACGTGCACAATaGAGGCAACTCCTATTTCCT +
Preference number: 4 (lower is better)
Translates to: ESTYSGPFISGTYLKSHHLQRAQ*RQLLFP
Trigger: AGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAA...ATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCCAGAATATGTTGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR TCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACATCTCCTTCATTTaGGTAGGGGTAGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYANISFI*VGVAVV
Trigger: CACCACTGCTACCCCTACTCAAATGAAGGAGATGTT...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR TCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTAACATCTCCTTCATTTaGGTAGGGGTAGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLNISFI*VGVAVV
Trigger: CACCACTGCTACCCCTACTCAAATGAAGGAGATGTT...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR TCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAAAATGCCCACTTTTCTaGTGTCATGGCCACTTACAG +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSKCPLF*CHGHLQ
Trigger: CTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTT...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATAAATGCCCACTTTTCTaGTGTCATGGCCACTTACAG +
Preference number: 4 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNKCPLF*CHGHLQ
Trigger: CTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTT...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR TCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCACAAATCCTGTACATATaGATGCCAGCAACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYAQILYI*MPATGD
Trigger: GTCCCCAGTTGCTGGCATTCATATGTACAGGATTTG...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATCTGGTAGCATGTCATTaGTGGGACATGAAGACATCT +
Preference number: 4 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNLVACH*WDMKTS
Trigger: AGATGTCTTCATGTCCCATCAATGACATGCTACCAG...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR GCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATACATACACGAGTAGTTaGATCAGGTTCCCTAGAATC +
Preference number: 4 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNTYTSS*IRFPRI
Trigger: GATTCTAGGGAACCTGATGCAACTACTCGTGTATGT...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATCCTGTACATATGAATaGCAGCAACTGGGGACACAT +
Preference number: 4 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTSCTYE*QQLGTH
Trigger: ATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGA...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCATCCTGTACATATGAATaGCAGCAACTGGGGACACAT +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSSCTYE*QQLGTH
Trigger: ATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGA...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGACTTCCCCAGGCTCTaGATGCATAAAGAAATCATT +
Preference number: 4 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNDFPRL*MHKEII
Trigger: AATGATTTCTTTATGCATGCAGAGCCTGGGGAAGTC...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp AGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTTTGCTAATAGATAGCCAGTaGTGTATAGGTCATATTTCT +
Preference number: 4 (lower is better)
Translates to: SYWHLAKAISYAPSRQVLLIDSQ*CIGHIS
Trigger: AGAAATATGACCTATACAGCACTGGCTATCTATTAG...CAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp GGGCCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGACACTAATGAAACTGTaGCAACAGCAAGAAGCTACT +
Preference number: 4 (lower is better)
Translates to: GPFISGTYLKSHHPISRMTLMKL*QQQEAT
Trigger: AGTAGCTTCTTGCTGTTGCCACAGTTTCATTAGTGT...CATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATTCTACTTGGGTAGCTTaGTGCCATTATCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNSTWVA*CHYPVE
Trigger: TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGA...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR TCA 90 bp CTAAAACAATCTAAAAGAATCAACATATTCTGGGCCATTTATCTCTGGCACGTATCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LKQSKRINIFWAIYLWHVSFCEK*LEFGRL
Trigger: CAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGA...TACGTGCCAGAGATAAATGGCCCAGAATATGTTGATTCTTTTAGATTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR TCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTAAATGCCCACTTTTCTaGTGTCATGGCCACTTACAG +
Preference number: 4 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLKCPLF*CHGHLQ
Trigger: CTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTT...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAAATGCCCACTTTTCTaGTGTCATGGCCACTTACAG +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYAKCPLF*CHGHLQ
Trigger: CTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTT...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR TCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATAGTACAAAGATGTTATaGCTGGCAGAAATGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNSTKML*LAEMLC
Trigger: GCAGAGCATTTCTGCCAGTCATAACATCTTTGTACT...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR GCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAATTGTGAATAGATACTaGTTCGGAAGGCACAGCCTA +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSIVNRY*FGRHSL
Trigger: TAGGCTGTGCCTTCCGAAGCAGTATCTATTCACAAT...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR GCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACACGTTCCGCATCTTTCTaGCAGTCAGTTGTAAATTCT +
Preference number: 4 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTRSASF*QSVVNS
Trigger: AGAATTTACAACTGACTGGCAGAAAGATGCGGAACG...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATCGTTCCGCATCTTTCTaGCAGTCAGTTGTAAATTCT +
Preference number: 4 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNRSASF*QSVVNS
Trigger: AGAATTTACAACTGACTGGCAGAAAGATGCGGAACG...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR GCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGCGTTCCGCATCTTTCTaGCAGTCAGTTGTAAATTCT +
Preference number: 4 (lower is better)
Translates to: MPATGDTFSIHILCKLTWRSASF*QSVVNS
Trigger: AGAATTTACAACTGACTGGCAGAAAGATGCGGAACG...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCCAGCCAAGCCTTTTaGATTTTCTGCAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: MPATGDTFSIHILCKLTWSSQAF*IFCNCF
Trigger: GAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGA...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCATCCAGCCAAGCCTTTTaGATTTTCTGCAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSSSQAF*IFCNCF
Trigger: GAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGA...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAAGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 4 (lower is better)
Translates to: SRIPETSTWVAWCHYPVEVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR GCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAACATACACGAGTAGTTaGATCAGGTTCCCTAGAATC +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSTYTSS*IRFPRI
Trigger: GATTCTAGGGAACCTGATGCAACTACTCGTGTATGT...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACAACATACACGAGTAGTTaGATCAGGTTCCCTAGAATC +
Preference number: 4 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTTYTSS*IRFPRI
Trigger: GATTCTAGGGAACCTGATGCAACTACTCGTGTATGT...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGACATACACGAGTAGTTaGATCAGGTTCCCTAGAATC +
Preference number: 4 (lower is better)
Translates to: MPATGDTFSIHILCKLTWTYTSS*IRFPRI
Trigger: GATTCTAGGGAACCTGATGCAACTACTCGTGTATGT...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTTCCTGTACATATGAATaGCAGCAACTGGGGACACAT +
Preference number: 4 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLSCTYE*QQLGTH
Trigger: ATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGA...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCATCCTGTACATATGAATaGCAGCAACTGGGGACACAT +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYASCTYE*QQLGTH
Trigger: ATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGA...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAGCAGGGTTTGTACATaGAGGTGTGGTAGAAAAACC +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYASRVCT*RCGRKT
Trigger: GGTTTTTCTACCACACCTGCATGTACAAACCCTGCT...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651316.1
CDS-3UTR CCA 90 bp CCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGGGAAGAATCAACATATTCTaGGCCATTTATCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PFISGTYLKSHHPISRMGRINIF*AIYLWH
Trigger: GTGCCAGAGATAAATGGCCCAGAATATGTTGATTCT...TCCCATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATGGTGCCATTATCCTGTaGAATCTGATATGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNGAIIL*NLICLV
Trigger: TACCAGACATATCAGATTCCACAGGATAATGGCACC...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR GCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTATTGTGAATAGATACTaGTTCGGAAGGCACAGCCTA +
Preference number: 4 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLIVNRY*FGRHSL
Trigger: TAGGCTGTGCCTTCCGAAGCAGTATCTATTCACAAT...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR GCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCACGTTCCGCATCTTTCTaGCAGTCAGTTGTAAATTCT +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYARSASF*QSVVNS
Trigger: AGAATTTACAACTGACTGGCAGAAAGATGCGGAACG...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTCGTTCCGCATCTTTCTaGCAGTCAGTTGTAAATTCT +
Preference number: 4 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLRSASF*QSVVNS
Trigger: AGAATTTACAACTGACTGGCAGAAAGATGCGGAACG...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650839.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTGCATTTTCTGCAATTaGTTCCAAAGTCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: MPATGDTFSIHILCKLTWCIFCN*FQSLRI
Trigger: GATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCA...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATTGCATTTTCTGCAATTaGTTCCAAAGTCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNCIFCN*FQSLRI
Trigger: GATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCA...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR GCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 4 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATTTACCAGAAATGCTCTaGTTTTTAGTAGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNLPEML*FLVAIS
Trigger: ACTGATGGCTACTAAAAAGCAGAGCATTTCTGGTAA...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAGACTTCCCCAGGCTCTaGATGCATAAAGAAATCATT +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYADFPRL*MHKEII
Trigger: AATGATTTCTTTATGCATGCAGAGCCTGGGGAAGTC...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGACTTCCCCAGGCTCTaGATGCATAAAGAAATCATT +
Preference number: 4 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLDFPRL*MHKEII
Trigger: AATGATTTCTTTATGCATGCAGAGCCTGGGGAAGTC...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CAGCAGACAACATTGAGAATCAACACTAATGAAACTGTGGCAACAGCAAGAAGCCTAATAGATAGCCAGTaGTGTATAGGTCATATTTCT +
Preference number: 4 (lower is better)
Translates to: QQTTLRINTNETVATARSLIDSQ*CIGHIS
Trigger: AGAAATATGACCTATACAGCACTGGCTATCTATTAG...GCTTCTTGCTGTTGCCACAGTTTCATTAGTGTTGATTCTCAATGTTGTCTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CCA 90 bp CCTCTACTTAAAGTCTGCCTAAAACAATCTAAAAGAATCAACATATTCTGGGCCACAGCAAGAAGCTACTaGCACTTAGCTAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: PLLKVCLKQSKRINIFWATARSY*HLAKAI
Trigger: AATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGT...GGCCCAGAATATGTTGATTCTTTTAGATTGTTTTAGGCAGACTTTAAGTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS-3UTR CCA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAAAAACATAACATTACTTaGAGGGTTGCAGTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SRIPETSTWVAWCHYPVEKHNIT*RVAVSK
Trigger: CTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTT...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR TCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTAAAAGGGAACCATCTTaGCATACATGGCAAATTTCG +
Preference number: 4 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLKREPS*HTWQIS
Trigger: CGAAATTTGCCATGTATGTCAAGATGGTTCCCTTTT...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652340.1
CDS-3UTR GCA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 4 (lower is better)
Translates to: MPATGDTFSIHILCKLTWVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAAGTAGTCAAATAAAGTaGCATCAAAACCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSSSQIK*HQNLSM
Trigger: CATGCTGAGGTTTTGATGGCACTTTATTTGACTACT...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650814.1
CDS-3UTR GCA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAAGTAGTCAAATAAAGTaGCATCAAAACCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PATGDTFSIHILCKLTWSSSQIK*HQNLLA
Trigger: AGCCAAGAGGTTTTGATGGCACTTTATTTGACTACT...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652340.1
CDS-3UTR GCA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 4 (lower is better)
Translates to: CTYECQQLGTHLVFTFYAVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR GCA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGTTTTTCTCCTCTTTTaGGATCTTCAACCTCAAATC +
Preference number: 4 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLVFLLF*DLQPQI
Trigger: GATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAAC...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS CCA 90 bp TTCCACGGAAGCGGGTGGAGGAGCCGCGCTTCCCGGCAGGCCACGTaGGGCGGAAAGACCCACTCAGTTTCCTCGCACCTCCGCCTCGAC +
Preference number: 5 (lower is better)
Translates to: FHGSGWRSRASRQAT*GGKTHSVSSHLRLD
Trigger: GTCGAGGCGGAGGTGCGAGGAAACTGAGTGGGTCTTTCCGCCCCACGTGGCCTGCCGGGAAGCGCGGCTCCTCCACCCGCTTCCGTGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS GCA 90 bp CAGCATCTGGAGAGGCAGTCACCAACTACACATCGGCCCCGCTGTTaGCGCAGCCGCCACCGCCGCCACGCGCACTTCCGGGCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: QHLERQSPTTHRPRC*RSRHRRHAHFRAGE
Trigger: TTCACCAGCCCGGAAGTGCGCGTGGCGGCGGTGGCGGCTGCGGCAACAGCGGGGCCGATGTGTAGTTGGTGACTGCCTCTCCAGATGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651591.1
CDS CCA 90 bp GGTGTAAACCTGCAGAGAAAAACCATTCCATTCCACGGAAGCGGGTaGAGGAGCCGCGCTTCCCGGCAGGCCACGTGGGGCGGAAAGACC +
Preference number: 5 (lower is better)
Translates to: GVNLQRKTIPFHGSG*RSRASRQATWGGKT
Trigger: GGTCTTTCCGCCCCACGTGGCCTGCCGGGAAGCGCGGCTCCTCCACCCGCTTCCGTGGAATGGAATGGTTTTTCTCTGCAGGTTTACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CCA 90 bp TGGTGGTTTGGTCGGGGAGCATTACCACGACACTCGCATGCCACATaGTACTGTGATGACACTCTCCCCAGAGCAGGGCTTCAGGCAGTA +
Preference number: 5 (lower is better)
Translates to: WWFGRGALPRHSHAT*YCDDTLPRAGLQAV
Trigger: TACTGCCTGAAGCCCTGCTCTGGGGAGAGTGTCATCACAGTACCATGTGGCATGCGAGTGTCGTGGTAATGCTCCCCGACCAAACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CCA 90 bp TATTGGGCAGCGAGAATAAGCAGCCCAACCCTCGGTTTGGTGGTTTaGTCGGGGAGCATTACCACGACACTCGCATGCCACATGGTACTG +
Preference number: 5 (lower is better)
Translates to: YWAARISSPTLGLVV*SGSITTTLACHMVL
Trigger: CAGTACCATGTGGCATGCGAGTGTCGTGGTAATGCTCCCCGACCAAACCACCAAACCGAGGGTTGGGCTGCTTATTCTCGCTGCCCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CAA 90 bp TTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATGGAGGCAACTCCTAGCCCAACCCTCGGTTaGGTGGTTTGGTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: FLCSFQTGFATCTMEATPSPTLG*VVWSGS
Trigger: GCTCCCCGACCAAACCACCAAACCGAGGGTTGGGCT...AGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CAA 90 bp ATTCCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACGCGTCGGGGCTATTTaGCCCACTGCTGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: IPTGFVMLLCGCFSNISRRVGAI*PTAEEA
Trigger: GGCCTCCTCAGCAGTGGGCAAAATAGCCCCGACGCG...TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS TCA 90 bp TGGTACTGTGATGACACTCTCCCCAGAGCAGGGCTTCAGGCAGTATaGGAGGGATGCGGGGTTCTAGAAACTCTAACCGAGTTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: WYCDDTLPRAGLQAV*EGCGVLETLTEFLV
Trigger: GACCAGAAACTCGGTTAGAGTTTCTAGAACCCCGCATCCCTCTCATACTGCCTGAAGCCCTGCTCTGGGGAGAGTGTCATCACAGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CAA 90 bp GAAACTGTGGCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATCGCGTCGGGGCTATTTaGCCCACTGCTGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: ETVATARSYWHLAKAISYRVGAI*PTAEEA
Trigger: GGCCTCCTCAGCAGTGGGCAAAATAGCCCCGACGCG...ATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGCCACAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402675.5
ENST00000420393.5
CDS CCA 90 bp ACTCTAACCGAGTTTCTGGTCTCCAAAACTTGTCATGGTCACAGGTaGGTATCACCCTACTTCCCCACCTGCACTCGAGGATTCACGACC +
Preference number: 5 (lower is better)
Translates to: TLTEFLVSKTCHGHR*VSPYFPTCTRGFTT
Trigger: GGTCGTGAATCCTCGAGTGCAGGTGGGGAAGTAGGGTGATACCCACCTGTGACCATGACAAGTTTTGGAGACCAGAAACTCGGTTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CAA 90 bp GCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCCCTCGGTTTGGTGGTTaGGTCGGGGAGCATTACCAC +
Preference number: 5 (lower is better)
Translates to: ATARSYWHLAKAISYAPSPRFGG*VGEHYH
Trigger: GTGGTAATGCTCCCCGACCAAACCACCAAACCGAGG...GGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CCA 90 bp GGTTCTAGAAACTCTAACCGAGTTTCTGGTCTCCAAAACTTGTCATaGTCACAGGTGGGTATCACCCTACTTCCCCACCTGCACTCGAGG +
Preference number: 5 (lower is better)
Translates to: GSRNSNRVSGLQNLS*SQVGITLLPHLHSR
Trigger: CCTCGAGTGCAGGTGGGGAAGTAGGGTGATACCCACCTGTGACCATGACAAGTTTTGGAGACCAGAAACTCGGTTAGAGTTTCTAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CCA 90 bp ACAGACTACCTCCAGCTGGGGAAGCTGAGTAACTTCATGTTAGGGTaGCGTCTGTGCCAAGCCTTGAAAAAGCAGCAGGGTTTGTACATG +
Preference number: 5 (lower is better)
Translates to: TDYLQLGKLSNFMLG*RLCQALKKQQGLYM
Trigger: CATGTACAAACCCTGCTGCTTTTTCAAGGCTTGGCACAGACGCCACCCTAACATGAAGTTACTCAGCTTCCCCAGCTGGAGGTAGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651316.1
CDS-3UTR CAA 90 bp TGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTCCTTCCAGACAGGTTTaGCAACGTGCACAATGGAGG +
Preference number: 5 (lower is better)
Translates to: WHLAKAISYAPSRQVLQRPSRQV*QRAQWR
Trigger: CCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGG...ACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CAA 90 bp ATTCCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGACCTTCCAGACAGGTTTaGCAACGTGCACAATGGAGG +
Preference number: 5 (lower is better)
Translates to: IPTGFVMLLCGCFSNISRPSRQV*QRAQWR
Trigger: CCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGG...TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CAA 90 bp ATTCCCACAGGCTTTGTAATGCTACTGTGTGGCTGCTTTAGCAACATCAGCAGATCTGGTCTCCAAAACTaGTCATGGTCACAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: IPTGFVMLLCGCFSNISRSGLQN*SWSQVG
Trigger: ACCCACCTGTGACCATGACAAGTTTTGGAGACCAGA...TCTGCTGATGTTGCTAAAGCAGCCACACAGTAGCATTACAAAGCCTGTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CAA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATACACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 5 (lower is better)
Translates to: LNSDPQVNPMTSPGSACIHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATATGCTTTTCTCCTCTGTaGTTTATCATCCGAATCCCA +
Preference number: 5 (lower is better)
Translates to: LNSDPQVNPMTSPGSACICFSPL*FIIRIP
Trigger: TGGGATTCGGATGATAAACAACAGAGGAGAAAAGCA...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CAA 90 bp CACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGTGCTTTTCTCCTCTGTaGTTTATCATCCGAATCCCA +
Preference number: 5 (lower is better)
Translates to: HFSDVMATYRKWRNGPLLCFSPL*FIIRIP
Trigger: TGGGATTCGGATGATAAACAACAGAGGAGAAAAGCA...CAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR CAA 90 bp CTCAATAGTGACCCTCAAGTTAATCCCATGACTTCCCCAGGCTCTGCATGCATAAAAATAAGACCCTTGTaGTTCTACAGAGGTCCCCTA +
Preference number: 5 (lower is better)
Translates to: LNSDPQVNPMTSPGSACIKIRPL*FYRGPL
Trigger: TAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTT...TATGCATGCAGAGCCTGGGGAAGTCATGGGATTAACTTGAGGGTCACTATTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp ACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGACCACTGCTGCAAAATAAGACCCTTGTaGTTCTACAGAGGTCCCCTA +
Preference number: 5 (lower is better)
Translates to: TFLMSWPLTGNGGMDHCCKIRPL*FYRGPL
Trigger: TAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTT...GCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp CCATTTATCTCTGGCACGTACCTAAAAAGCCATCATCCAATTTCAAGAATGGGACCTTCCAGACAGGTTTaGCAACGTGCACAATGGAGG +
Preference number: 5 (lower is better)
Translates to: PFISGTYLKSHHPISRMGPSRQV*QRAQWR
Trigger: CCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGG...TCCCATTCTTGAAATTGGATGATGGCTTTTTAGGTACGTGCCAGAGATAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339437.11
ENST00000402675.5
CDS CCA 90 bp ATAAGGTATATAAGCTCTGGAAAGCTCTGTAATTCTGAGTCGGTCTaGGATATTTTCCACGCCTTCGCCCCGTACCTGGTTACAGAAATA +
Preference number: 5 (lower is better)
Translates to: IRYISSGKLCNSESV*DIFHAFAPYLVTEI
Trigger: TATTTCTGTAACCAGGTACGGGGCGAAGGCGTGGAAAATATCCCAGACCGACTCAGAATTACAGAGCTTTCCAGAGCTTATATACCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS-3UTR CAA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGAAACATCTCCTTCATTaGAGTAGGGGTAGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMKHLLH*SRGSSG
Trigger: ACCACTGCTACCCCTACTCAAATGAAGGAGATGTTT...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR CAA 90 bp AGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGAAAACATCTCCTTCATTaGAGTAGGGGTAGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: RNAHFSDVMATYRKWRNGKHLLH*SRGSSG
Trigger: ACCACTGCTACCCCTACTCAAATGAAGGAGATGTTT...TCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR CAA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGCACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 5 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp TGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATATTTCTGAGGCTTTCTaGCATCATAGCCCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: CHYPVESDMSGSMSLMGHISEAF*HHSPCD
Trigger: GTCACAGGGGCTATGATGCAAGAAAGCCTCAGAAAT...ATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CAA 90 bp TGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATAAACATCTCCTTCATTaGAGTAGGGGTAGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: CHYPVESDMSGSMSLMGHKHLLH*SRGSSG
Trigger: ACCACTGCTACCCCTACTCAAATGAAGGAGATGTTT...ATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CAA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGTGCTTTTCTCCTCTGTaGTTTATCATCCGAATCCCA +
Preference number: 5 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMCFSPL*FIIRIP
Trigger: TGGGATTCGGATGATAAACAACAGAGGAGAAAAGCA...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR CAA 90 bp AGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGATGCTTTTCTCCTCTGTaGTTTATCATCCGAATCCCA +
Preference number: 5 (lower is better)
Translates to: RNAHFSDVMATYRKWRNGCFSPL*FIIRIP
Trigger: TGGGATTCGGATGATAAACAACAGAGGAGAAAAGCA...TCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR CAA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAATCTGGTAGCATGTCATaGATGGGACATGAAGACATC +
Preference number: 5 (lower is better)
Translates to: SRIPETSTWVAWCHYPVESGSMS*MGHEDI
Trigger: GATGTCTTCATGTCCCATCAATGACATGCTACCAGA...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CAA 90 bp TGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATACCAGAAACATCTACTaGGGTAGCTTGGTGCCATTA +
Preference number: 5 (lower is better)
Translates to: CHYPVESDMSGSMSLMGHTRNIY*GSLVPL
Trigger: TAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGT...ATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CAA 90 bp TGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATTGCTTTTCTCCTCTGTaGTTTATCATCCGAATCCCA +
Preference number: 5 (lower is better)
Translates to: CHYPVESDMSGSMSLMGHCFSPL*FIIRIP
Trigger: TGGGATTCGGATGATAAACAACAGAGGAGAAAAGCA...ATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CAA 90 bp AGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGATTGCATTTTCTGCAATaGCTTCCAAAGTCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: RNAHFSDVMATYRKWRNGLHFLQ*LPKSQD
Trigger: ATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAA...TCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651352.1
ENST00000652340.1
CDS-3UTR CAA 90 bp GAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGAGGAATGGGTTTTTCTCCTCTTTaGCGATCTTCAACCTCAAAT +
Preference number: 5 (lower is better)
Translates to: EEMPTFLMSWPLTGNGGMGFSPL*RSSTSN
Trigger: ATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACC...CATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp ACTGTGGCAACAGCAAGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCATCAGCAGACAACATaGAGAATCAACACTAATGAA +
Preference number: 5 (lower is better)
Translates to: TVATARSYWHLAKAISYAHQQTT*RINTNE
Trigger: TTCATTAGTGTTGATTCTCAATGTTGTCTGCTGATG...AGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCTTGCTGTTGCCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CAA 90 bp AGAAGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTCATCAGCAGACAACATaGAGAATCAACACTAATGAA +
Preference number: 5 (lower is better)
Translates to: RSYWHLAKAISYAPSRQVHQQTT*RINTNE
Trigger: TTCATTAGTGTTGATTCTCAATGTTGTCTGCTGATG...AACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CAA 90 bp AGCTACTGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTTTGCATCAGCAGACAACATaGAGAATCAACACTAATGAA +
Preference number: 5 (lower is better)
Translates to: SYWHLAKAISYAPSRQVLHQQTT*RINTNE
Trigger: TTCATTAGTGTTGATTCTCAATGTTGTCTGCTGATG...CAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS-3UTR CAA 90 bp TCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATATCTACTTGGGTAGCTaGGTGCCATTATCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SDMSGSMSLMGHEDIFGNIYLGS*VPLSCG
Trigger: TCCACAGGATAATGGCACCAAGCTACCCAAGTAGAT...ATTTCCAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CAA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAAAACATCTCCTTCATTaGAGTAGGGGTAGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: PATGDTFSIHILCKLTWSKHLLH*SRGSSG
Trigger: ACCACTGCTACCCCTACTCAAATGAAGGAGATGTTT...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CAA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGAAACATCTCCTTCATTaGAGTAGGGGTAGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: MPATGDTFSIHILCKLTWKHLLH*SRGSSG
Trigger: ACCACTGCTACCCCTACTCAAATGAAGGAGATGTTT...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CAA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATTGCTTTTCTCCTCTGTaGTTTATCATCCGAATCCCA +
Preference number: 5 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNCFSPL*FIIRIP
Trigger: TGGGATTCGGATGATAAACAACAGAGGAGAAAAGCA...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
CDS-3UTR CAA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAATTGCATTTTCTGCAATaGCTTCCAAAGTCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: SRIPETSTWVAWCHYPVELHFLQ*LPKSQD
Trigger: ATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAA...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CAA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAAGGTTTTTCTCCTCTTTaGCGATCTTCAACCTCAAAT +
Preference number: 5 (lower is better)
Translates to: SRIPETSTWVAWCHYPVEGFSPL*RSSTSN
Trigger: ATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACC...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CAA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGCACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 5 (lower is better)
Translates to: MPATGDTFSIHILCKLTWHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp TCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCATTATCCTGTGGAAACATTACTTGGAGGGTaGCAGTTTCTAAGTGAAACT +
Preference number: 5 (lower is better)
Translates to: SRIPETSTWVAWCHYPVETLLGG*QFLSET
Trigger: AGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGT...TTCCACAGGATAATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434583.5
CDS-3UTR CAA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATTGCCATCAAAACCTCTaGGCTGTGTTTGAACTTGAA +
Preference number: 5 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNCHQNL*AVFELE
Trigger: TTCAAGTTCAAACACAGCCAAGAGGTTTTGATGGCA...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652340.1
CDS-3UTR CAA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTGCTTTTCTCCTCTGTaGTTTATCATCCGAATCCCA +
Preference number: 5 (lower is better)
Translates to: MPATGDTFSIHILCKLTWCFSPL*FIIRIP
Trigger: TGGGATTCGGATGATAAACAACAGAGGAGAAAAGCA...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CAA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATGCTTTTCTCCTCTGTaGTTTATCATCCGAATCCCA +
Preference number: 5 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTCFSPL*FIIRIP
Trigger: TGGGATTCGGATGATAAACAACAGAGGAGAAAAGCA...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
CDS-3UTR CAA 90 bp TCTTTTCCTGAAGAAATGCCCACTTTTCTGATGTCATGGCCACTTACAGGAAATGGTTTTTCTCCTCTTTaGCGATCTTCAACCTCAAAT +
Preference number: 5 (lower is better)
Translates to: SFPEEMPTFLMSWPLTGNGFSPL*RSSTSN
Trigger: ATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACC...ATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCAGGAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651093.1
ENST00000651316.1
ENST00000651352.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAAAAATAAGACCCTTGTaGTTCTACAGAGGTCCCCTA +
Preference number: 5 (lower is better)
Translates to: PATGDTFSIHILCKLTWSKIRPL*FYRGPL
Trigger: TAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTT...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp AACAAATCCTGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACAAAAATAAGACCCTTGTaGTTCTACAGAGGTCCCCTA +
Preference number: 5 (lower is better)
Translates to: NKSCTYECQQLGTHLVFTKIRPL*FYRGPL
Trigger: TAGGGGACCTCTGTAGAACAACAAGGGTCTTATTTT...TGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACAGGATTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCACACAAAATAAGACCCTaGTTGTTCTACAGAGGTCCC +
Preference number: 5 (lower is better)
Translates to: CTYECQQLGTHLVFTFYAHKIRP*LFYRGP
Trigger: GGGACCTCTGTAGAACAACAAGGGTCTTATTTTGTG...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTTGCATTTTCTGCAATaGCTTCCAAAGTCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: MPATGDTFSIHILCKLTWLHFLQ*LPKSQD
Trigger: ATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAA...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
CDS-3UTR CAA 90 bp ATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGGGTTTTTCTCCTCTTTaGCGATCTTCAACCTCAAAT +
Preference number: 5 (lower is better)
Translates to: MPATGDTFSIHILCKLTWGFSPL*RSSTSN
Trigger: ATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACC...CCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp CCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTGGTCAATACTGAAGCATAGCTaGCTAGAACAAATCCTGTAC +
Preference number: 5 (lower is better)
Translates to: PATGDTFSIHILCKLTWSILKHS*LEQILY
Trigger: GTACAGGATTTGTTCTAGCAAGCTATGCTTCAGTAT...TGACCAAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCATTGCATTTTCTGCAATaGCTTCCAAAGTCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: CTYECQQLGTHLVFTFYALHFLQ*LPKSQD
Trigger: ATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAA...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
CDS-3UTR CAA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTTTGCATTTTCTGCAATaGCTTCCAAAGTCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLLHFLQ*LPKSQD
Trigger: ATCCTGAGACTTTGGAAGCAATTGCAGAAAATGCAA...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000652340.1
CDS-3UTR CAA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAGGTTTTTCTCCTCTTTaGCGATCTTCAACCTCAAAT +
Preference number: 5 (lower is better)
Translates to: CTYECQQLGTHLVFTFYAGFSPL*RSSTSN
Trigger: ATTTGAGGTTGAAGATCGCAAAAGAGGAGAAAAACC...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp GAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAAACTTACTTATACTGAAGCATAGCTaGCTAGAACAAATCCTGTAC +
Preference number: 5 (lower is better)
Translates to: ECQQLGTHLVFTFYANLLILKHS*LEQILY
Trigger: GTACAGGATTTGTTCTAGCAAGCTATGCTTCAGTAT...AAGTAAGTTTGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS-3UTR CAA 90 bp TGTACATATGAATGCCAGCAACTGGGGACACATTTAGTATTCACATTTTATGCAATACTGAAGCATAGCTaGCTAGAACAAATCCTGTAC +
Preference number: 5 (lower is better)
Translates to: CTYECQQLGTHLVFTFYAILKHS*LEQILY
Trigger: GTACAGGATTTGTTCTAGCAAGCTATGCTTCAGTAT...TGCATAAAATGTGAATACTAAATGTGTCCCCAGTTGCTGGCATTCATATGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251607.11
ENST00000280591.10
ENST00000650755.1
ENST00000650814.1
ENST00000650839.1
ENST00000651316.1
ENST00000651591.1
ENST00000652340.1
CDS CAA 90 bp TCGCCGGAAACGTGGCGGGGACACGACCTCCGCGTCGGGGCTATTTaGCCCACTGCTGAGGAGGCCTCTCGCCACGTCCCGCTCCCGTCT +
Preference number: 6 (lower is better)
Translates to: SPETWRGHDLRVGAI*PTAEEASRHVPLPS
Trigger: AGACGGGAGCGGGACGTGGCGAGAGGCCTCCTCAGCAGTGGGCAAAATAGCCCCGACGCGGAGGTCGTGTCCCCGCCACGTTTCCGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402675.5
ENST00000413000.1
ENST00000420393.5
ENST00000469632.1
CDS CCA 72 bp AGCGGGTGGAGGAGCCGCGCTTCCCGGCAGGCCACGTaGGGCGGAAAGACCCACTCAGTTTCCTCGCACCTC +
Preference number: 6 (lower is better)
Translates to: SGWRSRASRQAT*GGKTHSVSSHL
Trigger: GAGGTGCGAGGAAACTGAGTGGGTCTTTCCGCCCCACGTGGCCTGCCGGGAAGCGCGGCTCCTCCACCCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CAA 72 bp ACGTGGCGGGGACACGACCTCCGCGTCGGGGCTATTTaGCCCACTGCTGAGGAGGCCTCTCGCCACGTCCCG +
Preference number: 6 (lower is better)
Translates to: TWRGHDLRVGAI*PTAEEASRHVP
Trigger: CGGGACGTGGCGAGAGGCCTCCTCAGCAGTGGGCAAAATAGCCCCGACGCGGAGGTCGTGTCCCCGCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402675.5
ENST00000413000.1
ENST00000420393.5
ENST00000469632.1
CDS TCA 72 bp ACACGACCTCCGCGTCGGGGCTATTTTGCCCACTGCTaGGGAGGCCTCTCGCCACGTCCCGCTCCCGTCTTC +
Preference number: 6 (lower is better)
Translates to: TRPPRRGYFAHC*GGLSPRPAPVF
Trigger: GAAGACGGGAGCGGGACGTGGCGAGAGGCCTCCTCAGCAGTGGGCAAAATAGCCCCGACGCGGAGGTCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402675.5
ENST00000413000.1
ENST00000420393.5
ENST00000469632.1
CDS CCA 72 bp CTGCAGAGAAAAACCATTCCATTCCACGGAAGCGGGTaGAGGAGCCGCGCTTCCCGGCAGGCCACGTGGGGC +
Preference number: 6 (lower is better)
Translates to: LQRKTIPFHGSG*RSRASRQATWG
Trigger: GCCCCACGTGGCCTGCCGGGAAGCGCGGCTCCTCCACCCGCTTCCGTGGAATGGAATGGTTTTTCTCTGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS GCA 72 bp AGAGGCAGTCACCAACTACACATCCCCCACGCCGGGTaGTGGCGACAAGGCCCAGTGAAAAAGCGTCTCGGG +
Preference number: 6 (lower is better)
Translates to: RGSHQLHIPHAG*WRQGPVKKRLG
Trigger: CCCGAGACGCTTTTTCACTGGGCCTTGTCGCCAGCACCCGGCGTGGGGGATGTGTAGTTGGTGACTGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000413000.1
ENST00000469632.1
CDS CCA 72 bp GGTCGGGGAGCATTACCACGACACTCGCATGCCACATaGTACTGTGATGACACTCTCCCCAGAGCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: GRGALPRHSHAT*YCDDTLPRAGL
Trigger: AAGCCCTGCTCTGGGGAGAGTGTCATCACAGTACCATGTGGCATGCGAGTGTCGTGGTAATGCTCCCCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CCA 72 bp GCGAGAATAAGCAGCCCAACCCTCGGTTTGGTGGTTTaGTCGGGGAGCATTACCACGACACTCGCATGCCAC +
Preference number: 6 (lower is better)
Translates to: ARISSPTLGLVV*SGSITTTLACH
Trigger: GTGGCATGCGAGTGTCGTGGTAATGCTCCCCGACCAAACCACCAAACCGAGGGTTGGGCTGCTTATTCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CAA 72 bp AGCGAGAATAAGCAGCCCAACCCTCGGTTTGGTGGTTaGGTCGGGGAGCATTACCACGACACTCGCATGCCA +
Preference number: 6 (lower is better)
Translates to: SENKQPNPRFGG*VGEHYHDTRMP
Trigger: TGGCATGCGAGTGTCGTGGTAATGCTCCCCGACCAAACCACCAAACCGAGGGTTGGGCTGCTTATTCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CAA 90 bp GCATCTCATTATTGGGCAGCGAGAATAAGCAGCCCAACCCTCGGTTaGGTGGTTTGGTCGGGGAGCATTACCACGACACTCGCATGCCAC +
Preference number: 6 (lower is better)
Translates to: ASHYWAARISSPTLG*VVWSGSITTTLACH
Trigger: GTGGCATGCGAGTGTCGTGGTAATGCTCCCCGACCAAACCACCAAACCGAGGGTTGGGCTGCTTATTCTCGCTGCCCAATAATGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CAA 72 bp TATTGGGCAGCGAGAATAAGCAGCCCAACCCTCGGTTaGGTGGTTTGGTCGGGGAGCATTACCACGACACTC +
Preference number: 6 (lower is better)
Translates to: YWAARISSPTLG*VVWSGSITTTL
Trigger: GAGTGTCGTGGTAATGCTCCCCGACCAAACCACCAAACCGAGGGTTGGGCTGCTTATTCTCGCTGCCCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CAA 90 bp TTATTGGGCAGCGAGAATAAGCAGCCCAACCCTCGGTTTGGTGGTTaGGTCGGGGAGCATTACCACGACACTCGCATGCCACATGGTACT +
Preference number: 6 (lower is better)
Translates to: LLGSENKQPNPRFGG*VGEHYHDTRMPHGT
Trigger: AGTACCATGTGGCATGCGAGTGTCGTGGTAATGCTCCCCGACCAAACCACCAAACCGAGGGTTGGGCTGCTTATTCTCGCTGCCCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CCA 72 bp ATAAGCTCTGGAAAGCTCTGTAATTCTGAGTCGGTCTaGGATATTTTCCACGCCTTCGCCCCGTACCGGCCC +
Preference number: 6 (lower is better)
Translates to: ISSGKLCNSESV*DIFHAFAPYRP
Trigger: GGGCCGGTACGGGGCGAAGGCGTGGAAAATATCCCAGACCGACTCAGAATTACAGAGCTTTCCAGAGCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397779.3
CDS CCA 72 bp CTCCAGCTGGGGAAGCTGAGTAACTTCATGTTAGGGTaGCGTCTGTGCCAAGCCTTGAAAAAGCAGCAGGGT +
Preference number: 6 (lower is better)
Translates to: LQLGKLSNFMLG*RLCQALKKQQG
Trigger: ACCCTGCTGCTTTTTCAAGGCTTGGCACAGACGCCACCCTAACATGAAGTTACTCAGCTTCCCCAGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651316.1
CDS CCA 72 bp GAGTTTCTGGTCTCCAAAACTTGTCATGGTCACAGGTaGGTATCACCCTACTTCCCCACCTGCACTCGAGGA +
Preference number: 6 (lower is better)
Translates to: EFLVSKTCHGHR*VSPYFPTCTRG
Trigger: TCCTCGAGTGCAGGTGGGGAAGTAGGGTGATACCCACCTGTGACCATGACAAGTTTTGGAGACCAGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CCA 72 bp AACTCTAACCGAGTTTCTGGTCTCCAAAACTTGTCATaGTCACAGGTGGGTATCACCCTACTTCCCCACCTG +
Preference number: 6 (lower is better)
Translates to: NSNRVSGLQNLS*SQVGITLLPHL
Trigger: CAGGTGGGGAAGTAGGGTGATACCCACCTGTGACCATGACAAGTTTTGGAGACCAGAAACTCGGTTAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS CCA 72 bp ATAAGCTCTGGAAAGCTCTGTAATTCTGAGTCGGTCTaGGATATTTTCCACGCCTTCGCCCCGTACCTGGTT +
Preference number: 6 (lower is better)
Translates to: ISSGKLCNSESV*DIFHAFAPYLV
Trigger: AACCAGGTACGGGGCGAAGGCGTGGAAAATATCCCAGACCGACTCAGAATTACAGAGCTTTCCAGAGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS TCA 72 bp TTCCTGATTCTTTTCCTGCCATCTTGCAATCTCCTCTaGTTTCTGGCACACCGCGGCCTTCCCTTCTACATA +
Preference number: 6 (lower is better)
Translates to: FLILFLPSCNLL*FLAHRGLPFYI
Trigger: TATGTAGAAGGGAAGGCCGCGGTGTGCCAGAAATCAGAGGAGATTGCAAGATGGCAGGAAAAGAATCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS TCA 72 bp GGGGGCTGTCAGACTCTTCAGTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTGCAACTTCATTGTGAA +
Preference number: 6 (lower is better)
Translates to: GGCQTLQSFCEK*LEFGRLQLHCE
Trigger: TTCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGACTGAAGAGTCTGACAGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469632.1
CDS CAA 90 bp TGGCACTTAGCTAAAGCCATTTCCTATGCTCCTTCCAGACAGGTTTaGCAACGTGCACAATGGAGGCAACTCCTATTTCCTTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: WHLAKAISYAPSRQV*QRAQWRQLLFPSSF
Trigger: GAAGGAAGAAGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAAATGGCTTTAGCTAAGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS CAA 72 bp TCTAGAAACTCTAACCGAGTTTCTGGTCTCCAAAACTaGTCATGGTCACAGGTGGGTATCACCCTACTTCCC +
Preference number: 6 (lower is better)
Translates to: SRNSNRVSGLQN*SWSQVGITLLP
Trigger: GGGAAGTAGGGTGATACCCACCTGTGACCATGACAAGTTTTGGAGACCAGAAACTCGGTTAGAGTTTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402675.5
CDS TCA 72 bp GTTTTGGACATGAAGTCCTCGCCCACGCCTATGTCCTaGATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTT +
Preference number: 6 (lower is better)
Translates to: VLDMKSSPTPMS*MVMPRFSSRVF
Trigger: AAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCGAGGACTTCATGTCCAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469632.1
CDS TCA 72 bp CTCACCTGTCAGACTCTTCAGTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTGCAACTTCATTGTGAA +
Preference number: 6 (lower is better)
Translates to: LTCQTLQSFCEK*LEFGRLQLHCE
Trigger: TTCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGACTGAAGAGTCTGACAGGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465998.1
CDS GCA 72 bp CATTTCCTATGCTCCTTCCAGACAGGTTTTGCAACGTaGACAATGGAGGCAACTCCTATTTCCTTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: HFLCSFQTGFAT*TMEATPISFFL
Trigger: AAGGAAGAAGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATAGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS CCA 72 bp TATGCTCCTTCCAGACAGGTTTTGCAACGTGCACAATaGAGGCAACTCCTATTTCCTTCTTCCTTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: YAPSRQVLQRAQ*RQLLFPSSFSS
Trigger: AGAACTGAAGGAAGAAGGAAATAGGAGTTGCCTCCATTGTGCACGTTGCAAAACCTGTCTGGAAGGAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS TCA 72 bp TATACCTGTCAGACTCTTCAGTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTGCAACTTCATTGTGAA +
Preference number: 6 (lower is better)
Translates to: YTCQTLQSFCEK*LEFGRLQLHCE
Trigger: TTCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGACTGAAGAGTCTGACAGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339437.11
ENST00000402675.5
ENST00000420393.5
CDS TCA 72 bp CTTATCTGTCAGACTCTTCAGTCCTTCTGTGAAAAGTaGCTGGAATTCGGGAGACTGCAACTTCATTGTGAA +
Preference number: 6 (lower is better)
Translates to: LICQTLQSFCEK*LEFGRLQLHCE
Trigger: TTCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGACTGAAGAGTCTGACAGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651591.1
CDS CAA 72 bp GCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTaGTCAATTCTGGCTTTTGTTGCCATTGCTTTTGGT +
Preference number: 6 (lower is better)
Translates to: AVQKLFSLIRSH*SILAFVAIAFG
Trigger: ACCAAAAGCAATGGCAACAAAAGCCAGAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469632.1