Pregenerated sensors for TRNP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000253368Ensembl transcript IDs: ENST00000522111.3, ENST00000531285.1
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCATCAGCCAGTTCTCCAGAACCAGCCCCTTGCCACTGTAAAGTaGAAGGCTCCTGTGAGGAGGGCGCTGGGATTGTGTAAGGTCAAT | + |
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Preference number: 1 (lower is better) Translates to: EHQPVLQNQPLATVK*KAPVRRALGLCKVN Trigger: ATTGACCTTACACAATCCCAGCGCCCTCCTCACAGGAGCCTTTCACTTTACAGTGGCAAGGGGCTGGTTCTGGAGAACTGGCTGATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR GCA 90 bp | ATGAAGAAATTCAGAGCATCAGCCAGTTCTCCAGAACCAGCCCCTTaGCACTGTAAAGTGAAAGGCTCCTGTGAGGAGGGCGCTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: MKKFRASASSPEPAP*HCKVKGSCEEGAGI Trigger: AATCCCAGCGCCCTCCTCACAGGAGCCTTTCACTTTACAGTGGCAAGGGGCTGGTTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR GCA 90 bp | GTCAAGGGAGAATTGGTCTGCAAATCAAAGTCAACAGGGCCAGACTaGCAAACGAAACTAAATACAAGCTGCTCCAGGAACCGTCAACTT | + |
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Preference number: 1 (lower is better) Translates to: VKGELVCKSKSTGPD*QTKLNTSCSRNRQL Trigger: AAGTTGACGGTTCCTGGAGCAGCTTGTATTTAGTTTCGTTTGGCAGTCTGGCCCTGTTGACTTTGATTTGCAGACCAATTCTCCCTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR TCA 90 bp | CATCTCCAATTGTACAGTGTAAGCCAAAGTCAAATGTGGGGTATATaGAGAAATTCAGAGCATCAGCCAGTTCTCCAGAACCAGCCCCTT | + |
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Preference number: 1 (lower is better) Translates to: HLQLYSVSQSQMWGI*RNSEHQPVLQNQPL Trigger: AAGGGGCTGGTTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATTTGACTTTGGCTTACACTGTACAATTGGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR GCA 90 bp | GGCAGCAAGGGCACTTGCAAAGTGAACCTCAGAACCCCATGCATTTaGCTTACATTATGGAAATTTATTCCTCCTGAATGTATAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GSKGTCKVNLRTPCI*LTLWKFIPPECIRQ Trigger: CTGCCTTATACATTCAGGAGGAATAAATTTCCATAATGTAAGGCAAATGCATGGGGTTCTGAGGTTCACTTTGCAAGTGCCCTTGCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR TCA 90 bp | AGCCATAATAGACACAGAGGAAAGGCAGCAAGGGCACTTGCAAAGTaGACCTCAGAACCCCATGCATTTGCCTTACATTATGGAAATTTA | + |
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Preference number: 1 (lower is better) Translates to: SHNRHRGKAARALAK*TSEPHAFALHYGNL Trigger: TAAATTTCCATAATGTAAGGCAAATGCATGGGGTTCTGAGGTTCACTTTGCAAGTGCCCTTGCTGCCTTTCCTCTGTGTCTATTATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR GCA 90 bp | AGGAAAGGCAGCAAGGGCACTTGCAAAGTGAACCTCAGAACCCCATaGATTTGCCTTACATTATGGAAATTTATTCCTCCTGAATGTATA | + |
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Preference number: 1 (lower is better) Translates to: RKGSKGTCKVNLRTP*ICLTLWKFIPPECI Trigger: TATACATTCAGGAGGAATAAATTTCCATAATGTAAGGCAAATGCATGGGGTTCTGAGGTTCACTTTGCAAGTGCCCTTGCTGCCTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR CCA 90 bp | ACTTGCAAAGTGAACCTCAGAACCCCATGCATTTGCCTTACATTATaGAAATTTATTCCTCCTGAATGTATAAGGCAGGAGACTAATTCA | + |
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Preference number: 1 (lower is better) Translates to: TCKVNLRTPCICLTL*KFIPPECIRQETNS Trigger: TGAATTAGTCTCCTGCCTTATACATTCAGGAGGAATAAATTTCCATAATGTAAGGCAAATGCATGGGGTTCTGAGGTTCACTTTGCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGGATTGTGTAAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGACGAAGCTTGTCGGGGTaGCCAGGGGTCCGGGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: LGLCKVNSQRLPEGSAQGRSLSG*PGVRAW Trigger: CCACGCCCGGACCCCTGGCCACCCCGACAAGCTTCG...TCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTTACACAATCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR-3UTR GCA 90 bp | CTGGGATTGTGTAAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGACCCCTGGCCCCCAACTaGCTCTTCCTGCGGATCCGT | + |
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Preference number: 2 (lower is better) Translates to: LGLCKVNSQRLPEGSAQGPLAPN*LFLRIR Trigger: ACGGATCCGCAGGAAGAGGCAGTTGGGGGCCAGGGG...TCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTTACACAATCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGAGGAGGGCGCTGGGATTGTGTAAGGTCAATTCTCAACGTCTTCCTGAACTCAGCCTCCTCTACTaGGCCCCTGGCCCCCAACTG | + |
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Preference number: 2 (lower is better) Translates to: PVRRALGLCKVNSQRLPELSLLY*APGPQL Trigger: CAGTTGGGGGCCAGGGGCCCAGTAGAGGAGGCTGAG...TTCAGGAAGACGTTGAGAATTGACCTTACACAATCCCAGCGCCCTCCTCACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAGCAACATCTCCAATTGTACAGTGTAAGCCAAAGTCAAATGTGGGGTATCGAAGCTTGTCGGGGTaGCCAGGGGTCCGGGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: PVATSPIVQCKPKSNVGYRSLSG*PGVRAW Trigger: CCACGCCCGGACCCCTGGCCACCCCGACAAGCTTCG...ATACCCCACATTTGACTTTGGCTTACACTGTACAATTGGAGATGTTGCTACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR-3UTR CCA 90 bp | GGGGTAAGAGCAGGCGGCTGTGAGTCAGGTCAAGGGAGAATTGGTCTGCAAATCAAGCACACTCCCACGTaGAGAACAAGGGCAGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: GVRAGGCESGQGRIGLQIKHTPT*RTRAVD Trigger: ATCCACTGCCCTTGTTCTCCACGTGGGAGTGTGCTT...GATTTGCAGACCAATTCTCCCTTGACCTGACTCACAGCCGCCTGCTCTTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR-3UTR TCA 90 bp | AATGTGGGGTATATGAAGAAATTCAGAGCATCAGCCAGTTCTCCAGAACCAGCCAGTGAAAGGCTCCTGTaGGGAGGGCGCTGGGATTGT | + |
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Preference number: 2 (lower is better) Translates to: NVGYMKKFRASASSPEPASERLL*GGRWDC Trigger: ACAATCCCAGCGCCCTCCTCACAGGAGCCTTTCACT...GGCTGGTTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR-3UTR CCA 90 bp | AATGTGGGGTATATGAAGAAATTCAGAGCATCAGCCAGTTCTCCAGAACCAGCCGAGGTTCTGAGGAGTTaGAAGGAGCAGCCGCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: NVGYMKKFRASASSPEPAEVLRS*KEQPLR Trigger: TCTTAGCGGCTGCTCCTTCCAACTCCTCAGAACCTC...GGCTGGTTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531285.1 |
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| 3UTR-3UTR TCA 90 bp | GGTCTGCAAATCAAAGTCAACAGGGCCAGACTGCCAAACGAAACTAAATACAAGATAGAGTGGAGGTTCTaGGGAGTTGGAAGGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GLQIKVNRARLPNETKYKIEWRF*GVGRSS Trigger: TGAGCTCCTTCCAACTCCTCAGAACCTCCACTCTAT...CTTGTATTTAGTTTCGTTTGGCAGTCTGGCCCTGTTGACTTTGATTTGCAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGCCAAAGTCAAATGTGGGGTATATGAAGAAATTCAGAGCATCAGCCAGTCTTGCCACTGTAAAGTaGAAGGCTCCTGTGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: CKPKSNVGYMKKFRASASLATVK*KAPVRR Trigger: CCTCCTCACAGGAGCCTTTCACTTTACAGTGGCAAG...ACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATTTGACTTTGGCTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR-3UTR TCA 90 bp | CAGGCGGCTGTGAGTCAGGTCAAGGGAGAATTGGTCTGCAAATCAAAGTCAACACAAATGTGGGGTATATaGAGAAATTCAGAGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: QAAVSQVKGELVCKSKSTQMWGI*RNSEHQ Trigger: CTGATGCTCTGAATTTCTTCATATACCCCACATTTG...TGTTGACTTTGATTTGCAGACCAATTCTCCCTTGACCTGACTCACAGCCGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGGTCAAGGGAGAATTGGTCTGCAAATCAAAGTCAACAGGGCCAGACTGCAAACTAAATACAAGCTaGTCCAGGAACCGTCAACTT | + |
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Preference number: 2 (lower is better) Translates to: SQVKGELVCKSKSTGPDCKLNTS*SRNRQL Trigger: AAGTTGACGGTTCCTGGAGCAGCTTGTATTTAGTTT...GCAGTCTGGCCCTGTTGACTTTGATTTGCAGACCAATTCTCCCTTGACCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCCAATTGTACAGTGTAAGCCAAAGTCAAATGTGGGGTATATGAAGAAATTCCCAACTGCCTCTTCCTaGGGATCCGTAGTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SPIVQCKPKSNVGYMKKFPTASS*GSVVLP Trigger: TGGAAGGACTACGGATCCGCAGGAAGAGGCAGTTGG...GAATTTCTTCATATACCCCACATTTGACTTTGGCTTACACTGTACAATTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR-3UTR CAA 90 bp | TTGGCAATGCTTGCTACGCTTAATCTGATTGCATCTCAGGGACCTGTAGCAACAGCACCTCGGCGAAGCTaGTCGGGGTGGCCAGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: LAMLATLNLIASQGPVATAPRRS*SGWPGV Trigger: GACCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGC...TGTTGCTACAGGTCCCTGAGATGCAATCAGATTAAGCGTAGCAAGCATTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR-3UTR CAA 90 bp | AATGTGGGGTATATGAAGAAATTCAGAGCATCAGCCAGTTCTCCAGAACCAGCCGCACCTCGGCGAAGCTaGTCGGGGTGGCCAGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: NVGYMKKFRASASSPEPAAPRRS*SGWPGV Trigger: GACCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGC...GGCTGGTTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR TCA 72 bp | CGAATCCAGAGGTCCAGATCCATAGAGTGGAGGTTCTaGGGAGTTGGAAGGAGCTCAGCCTCCTCTACTGGG | + |
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Preference number: 3 (lower is better) Translates to: RIQRSRSIEWRF*GVGRSSASSTG Trigger: CCCAGTAGAGGAGGCTGAGCTCCTTCCAACTCCTCAGAACCTCCACTCTATGGATCTGGACCTCTGGATTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR GCA 72 bp | GAATTGGTCTGCAAATCAAAGTCAACAGGGCCAGACTaGCAAACGAAACTAAATACAAGCTGCTCCAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: ELVCKSKSTGPD*QTKLNTSCSRN Trigger: GTTCCTGGAGCAGCTTGTATTTAGTTTCGTTTGGCAGTCTGGCCCTGTTGACTTTGATTTGCAGACCAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| 3UTR-3UTR CAA 90 bp | ATTGTACAGTGTAAGCCAAAGTCAAATGTGGGGTATATGAAGAAATTCAGAGCAAGGAGGGCGCTGGGATaGTGTAAGGTCAATTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: IVQCKPKSNVGYMKKFRARRALG*CKVNSQ Trigger: TTGAGAATTGACCTTACACAATCCCAGCGCCCTCCT...TGCTCTGAATTTCTTCATATACCCCACATTTGACTTTGGCTTACACTGTACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| 3UTR TCA 72 bp | TTGTACAGTGTAAGCCAAAGTCAAATGTGGGGTATATaGAGAAATTCAGAGCATCAGCCAGTTCTCCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: LYSVSQSQMWGI*RNSEHQPVLQN Trigger: GTTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATTTGACTTTGGCTTACACTGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR CCA 90 bp | TTCCTGCGGATCCGTAGTCCTTCCAGCCGGCGTCCGCGATCAGTCGGTCGGTCGCCAGGGGTCCGGGCGTaGAGGTCAGCGCTGCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FLRIRSPSSRRPRSVGRSPGVRA*RSALRG Trigger: TCCCCGCAGCGCTGACCTCCACGCCCGGACCCCTGG...CGACCGACCGACTGATCGCGGACGCCGGCTGGAAGGACTACGGATCCGCAGGAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR TCA 90 bp | GGCGTCCGCGATCAGTCGGTCGGTCGGCACCTCGGCGAAGCTTGTCGGGGTGGCGGTGCGCAGGGAGGATaGCCACAGCACACCCGAACA | + |
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Preference number: 4 (lower is better) Translates to: GVRDQSVGRHLGEACRGGGAQGG*PQHTRT Trigger: TGTTCGGGTGTGCTGTGGTCATCCTCCCTGCGCACC...GCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGACCGACTGATCGCGGACGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | TCGGTCGGCACCTCGGCGAAGCTTGTCGGGGTGGCCAGGGGTCCGGGCGTGGAGGTCTGCGGCTGTAGGTaGGCAGGGAGGATGACCACA | + |
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Preference number: 4 (lower is better) Translates to: SVGTSAKLVGVARGPGVEVCGCR*AGRMTT Trigger: TGTGGTCATCCTCCCTGCGCACCTACAGCCGCAGAC...CTCCACGCCCGGACCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | TCGGTCGGCACCTCGGCGAAGCTTGTCGGGGTGGCCAGGGGTCCGGGCGTGGAGGCCATCACCTCTTCCTaGGAAAAAGGTGTGTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SVGTSAKLVGVARGPGVEAITSS*EKGVSP Trigger: GGGGGACACACCTTTTTCTCAGGAAGAGGTGATGGC...CTCCACGCCCGGACCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | GTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCCAGAGGTCCAGATCCACTCGGCCGCGCCTGCTaGAGCCCCAGCTGCGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: VFLKAVPREKAESRGPDPLGRAC*SPSCVR Trigger: CCGGACGCAGCTGGGGCTTCAGCAGGCGCGGCCGAG...TGGATCTGGACCTCTGGATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | GCCTCTTCCTGCGGATCCGTAGTCCTTCCAGCCGGCGTCCGCGATCAGTCGGTCGCCAAGAAAACGCGGTaGAGCTGCAGCACGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ASSCGSVVLPAGVRDQSVAKKTR*SCSTRL Trigger: GAGCCGCGTGCTGCAGCTGCACCGCGTTTTCTTGGC...GACCGACTGATCGCGGACGCCGGCTGGAAGGACTACGGATCCGCAGGAAGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | GGCGTCCGCGATCAGTCGGTCGGTCGGCACCTCGGCGAAGCTTGTCGGGGTGGCCCAACTGCCTCTTCCTaGGGATCCGTAGTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GVRDQSVGRHLGEACRGGPTASS*GSVVLP Trigger: TGGAAGGACTACGGATCCGCAGGAAGAGGCAGTTGG...GCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGACCGACTGATCGCGGACGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR TCA 90 bp | GGCGTCCGCGATCAGTCGGTCGGTCGGCACCTCGGCGAAGCTTGTCGGGGTGGCCTTGCCACTGTAAAGTaGAAGGCTCCTGTGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GVRDQSVGRHLGEACRGGLATVK*KAPVRR Trigger: CCTCCTCACAGGAGCCTTTCACTTTACAGTGGCAAG...GCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGACCGACTGATCGCGGACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR GCA 90 bp | GTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCCAGAGGTCCAGATCCACCCTGGCGCCAGCGCTaGAGCTCCTGGTCCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: VFLKAVPREKAESRGPDPPWRQR*SSWSSA Trigger: GGCCGAGGACCAGGAGCTGCAGCGCTGGCGCCAGGG...TGGATCTGGACCTCTGGATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CCA 90 bp | CGCGATCAGTCGGTCGGTCGGCACCTCGGCGAAGCTTGTCGGGGTGGCCAGGGGAAGCACACTCCCACGTaGAGAACAAGGGCAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: RDQSVGRHLGEACRGGQGKHTPT*RTRAVD Trigger: ATCCACTGCCCTTGTTCTCCACGTGGGAGTGTGCTT...CCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGACCGACTGATCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | CGGCGTCCGCGATCAGTCGGTCGGTCGGCACCTCGGCGAAGCTTGTCGGGGTGGATAGAGTGGAGGTTCTaGGGAGTTGGAAGGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RRPRSVGRSAPRRSLSGWIEWRF*GVGRSS Trigger: TGAGCTCCTTCCAACTCCTCAGAACCTCCACTCTAT...CCACCCCGACAAGCTTCGCCGAGGTGCCGACCGACCGACTGATCGCGGACGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CCA 90 bp | GCGATCAGTCGGTCGGTCGGCACCTCGGCGAAGCTTGTCGGGGTGGCCAGGGGTGAGGTTCTGAGGAGTTaGAAGGAGCAGCCGCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: AISRSVGTSAKLVGVARGEVLRS*KEQPLR Trigger: TCTTAGCGGCTGCTCCTTCCAACTCCTCAGAACCTC...ACCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGACCGACTGATCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531285.1 |
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| CDS-3UTR TCA 90 bp | GCCTCTTCCTGCGGATCCGTAGTCCTTCCAGCCGGCGTCCGCGATCAGTCGGTCAAGAGCAGGCGGCTGTaGGTCAGGTCAAGGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: ASSCGSVVLPAGVRDQSVKSRRL*VRSREN Trigger: ATTCTCCCTTGACCTGACTCACAGCCGCCTGCTCTT...GACCGACTGATCGCGGACGCCGGCTGGAAGGACTACGGATCCGCAGGAAGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CCA 90 bp | GTCCAGATCCATAGAGTGGAGGTTCTGAGGAGTTGGAAGGAGCTCAGCCTCCTCATCCCGCTAGCGCCCTaGCGCCAGCGCTGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VQIHRVEVLRSWKELSLLIPLAP*RQRCSS Trigger: GGAGCTGCAGCGCTGGCGCCAGGGCGCTAGCGGGAT...GAGGAGGCTGAGCTCCTTCCAACTCCTCAGAACCTCCACTCTATGGATCTGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | GGGGTATATGAAGAAATTCAGAGCATCAGCCAGTTCTCCAGAACCAGCCCCTTGGGCGCGGGCCCTTCTTaGGGCGCGACCCGTGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: GVYEEIQSISQFSRTSPLGAGPS*GATREP Trigger: CGGCTCACGGGTCGCGCCTCAAGAAGGGCCCGCGCC...CAAGGGGCTGGTTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCATATACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | GCCTCTTCCTGCGGATCCGTAGTCCTTCCAGCCGGCGTCCGCGATCAGTCGGTCCTTGCCACTGTAAAGTaGAAGGCTCCTGTGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ASSCGSVVLPAGVRDQSVLATVK*KAPVRR Trigger: CCTCCTCACAGGAGCCTTTCACTTTACAGTGGCAAG...GACCGACTGATCGCGGACGCCGGCTGGAAGGACTACGGATCCGCAGGAAGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR GCA 90 bp | TGGGATTGTGTAAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGAGCAGCAGCCGCCGCCGTaGTTCGGCCAGCTCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: WDCVRSILNVFLKAVPREQQPPP*FGQLQR Trigger: GCGCTGGAGCTGGCCGAAGCACGGCGGCGGCTGCTG...CTCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTTACACAATCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | GTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCCAGAGGTCCAGATCCACCCCTGGCCCCCAACTaGCTCTTCCTGCGGATCCGT | + |
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Preference number: 4 (lower is better) Translates to: VFLKAVPREKAESRGPDPPLAPN*LFLRIR Trigger: ACGGATCCGCAGGAAGAGGCAGTTGGGGGCCAGGGG...TGGATCTGGACCTCTGGATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR TCA 90 bp | TGCCTCTTCCTGCGGATCCGTAGTCCTTCCAGCCGGCGTCCGCGATCAGTCGGTAGGGCACTTGCAAAGTaGACCTCAGAACCCCATGCA | + |
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Preference number: 4 (lower is better) Translates to: CLFLRIRSPSSRRPRSVGRALAK*TSEPHA Trigger: TGCATGGGGTTCTGAGGTTCACTTTGCAAGTGCCCT...ACCGACTGATCGCGGACGCCGGCTGGAAGGACTACGGATCCGCAGGAAGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CCA 90 bp | TGTGTAAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCCGAAGCTTGTCGGGGTaGCCAGGGGTCCGGGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: CVRSILNVFLKAVPREKARSLSG*PGVRAW Trigger: CCACGCCCGGACCCCTGGCCACCCCGACAAGCTTCG...GGCTTTCTCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTTACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR TCA 90 bp | GGCGTCCGCGATCAGTCGGTCGGTCGGCACCTCGGCGAAGCTTGTCGGGGTGGCCAAATGTGGGGTATATaGAGAAATTCAGAGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVRDQSVGRHLGEACRGGQMWGI*RNSEHQ Trigger: CTGATGCTCTGAATTTCTTCATATACCCCACATTTG...GCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGACCGACTGATCGCGGACGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR CCA 90 bp | CCGAATCCAGAGGTCCAGATCCATAGAGTGGAGGTTCTGAGGAGTTGGAAGGAGCTCAGCCTCCTCTACTaGGCCCCTGGCCCCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PNPEVQIHRVEVLRSWKELSLLY*APGPQL Trigger: CAGTTGGGGGCCAGGGGCCCAGTAGAGGAGGCTGAG...CTCCTTCCAACTCCTCAGAACCTCCACTCTATGGATCTGGACCTCTGGATTCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR CCA 90 bp | AATGTGGGGTATATGAAGAAATTCAGAGCATCAGCCAGTTCTCCAGAACCAGCCCCAGGGGTCCGGGCGTaGAGGTCAGCGCTGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NVGYMKKFRASASSPEPAPGVRA*RSALRG Trigger: TCCCCGCAGCGCTGACCTCCACGCCCGGACCCCTGG...GGCTGGTTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR GCA 90 bp | CAGGGACCTGTAGCAACATCTCCAATTGTACAGTGTAAGCCAAAGTCAAATGTGGGCGGCGGCGACCTCTaGTCTGCCGTCCCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGPVATSPIVQCKPKSNVGGGDL*SAVPSW Trigger: CCAGGAGGGGACGGCAGAGCAGAGGTCGCCGCCGCC...CACATTTGACTTTGGCTTACACTGTACAATTGGAGATGTTGCTACAGGTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | TGGGATTGTGTAAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGAGAAAACGCGGTGCAGCTaGAGCACGCGGCTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WDCVRSILNVFLKAVPREKTRCS*STRLSS Trigger: GCTGGAGAGCCGCGTGCTGCAGCTGCACCGCGTTTT...CTCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTTACACAATCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CCA 90 bp | TTCCCATTGGCAATGCTTGCTACGCTTAATCTGATTGCATCTCAGGGACCTGTACAGCGCTGCAGCTCCTaGTCCTCGGCCGCGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPLAMLATLNLIASQGPVQRCSS*SSAAPA Trigger: AGCAGGCGCGGCCGAGGACCAGGAGCTGCAGCGCTG...TACAGGTCCCTGAGATGCAATCAGATTAAGCGTAGCAAGCATTGCCAATGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CCA 90 bp | TTGGCAATGCTTGCTACGCTTAATCTGATTGCATCTCAGGGACCTGTAGCAACACGAAGCTTGTCGGGGTaGCCAGGGGTCCGGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAMLATLNLIASQGPVATRSLSG*PGVRAW Trigger: CCACGCCCGGACCCCTGGCCACCCCGACAAGCTTCG...TGTTGCTACAGGTCCCTGAGATGCAATCAGATTAAGCGTAGCAAGCATTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | CCGAATCCAGAGGTCCAGATCCATAGAGTGGAGGTTCTGAGGAGTTGGAAGGAGAGTGAAAGGCTCCTGTaGGGAGGGCGCTGGGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNPEVQIHRVEVLRSWKESERLL*GGRWDC Trigger: ACAATCCCAGCGCCCTCCTCACAGGAGCCTTTCACT...CTCCTTCCAACTCCTCAGAACCTCCACTCTATGGATCTGGACCTCTGGATTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR TCA 90 bp | TTCCTGCGGATCCGTAGTCCTTCCAGCCGGCGTCCGCGATCAGTCGGTCGGTCGCAAATGTGGGGTATATaGAGAAATTCAGAGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLRIRSPSSRRPRSVGRSQMWGI*RNSEHQ Trigger: CTGATGCTCTGAATTTCTTCATATACCCCACATTTG...CGACCGACCGACTGATCGCGGACGCCGGCTGGAAGGACTACGGATCCGCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR TCA 90 bp | GTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCCAGAGGTCCAGATCCAATAGAGTGGAGGTTCTaGGGAGTTGGAAGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFLKAVPREKAESRGPDPIEWRF*GVGRSS Trigger: GCTGCTCCTTCCAACTCCTCAGAACCTCCACTCTAT...TGGATCTGGACCTCTGGATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531285.1 |
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| CDS-3UTR CCA 90 bp | CTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCCAGAGGTCCAGATCCATAGGAGAACAAGGGCAGTaGATGAAGGGAACGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LPEGSAQGESRIQRSRSIGEQGQ*MKGTGI Trigger: AATCCCCGTTCCCTTCATCCACTGCCCTTGTTCTCC...TATGGATCTGGACCTCTGGATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | AATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCCAGAGGGGCAGCAAGGGCACTTaGAAAGTGAACCTCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: NSQRLPEGSAQGESRIQRGSKGT*KVNLRT Trigger: GGTTCTGAGGTTCACTTTGCAAGTGCCCTTGCTGCC...CCTCTGGATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | AAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCAGCAGACTATCTTTCTaGGGGGCCACAAGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: KVNSQRLPEGSAQGESRISRLSF*GATSTL Trigger: GAGTGTGCTTGTGGCCCCTCAGAAAGATAGTCTGCT...GATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | TCTCCAATTGTACAGTGTAAGCCAAAGTCAAATGTGGGGTATATGAAGAAATTCCCCCCACCGGCGGTCTaGGGCTGTAGGTGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPIVQCKPKSNVGYMKKFPPPAV*GCRCAG Trigger: CCCTGCGCACCTACAGCCGCAGACCGCCGGTGGGGG...GAATTTCTTCATATACCCCACATTTGACTTTGGCTTACACTGTACAATTGGAGA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | CCTGTAGCAACATCTCCAATTGTACAGTGTAAGCCAAAGTCAAATGTGGGGTATCCCCTGGCCCCCAACTaGCTCTTCCTGCGGATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVATSPIVQCKPKSNVGYPLAPN*LFLRIR Trigger: ACGGATCCGCAGGAAGAGGCAGTTGGGGGCCAGGGG...ATACCCCACATTTGACTTTGGCTTACACTGTACAATTGGAGATGTTGCTACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR GCA 90 bp | CTGGGATTGTGTAAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGACCAGAACCAGCCCCTTaGCACTGTAAAGTGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLCKVNSQRLPEGSAQGPEPAP*HCKVKG Trigger: GCCTTTCACTTTACAGTGGCAAGGGGCTGGTTCTGG...TCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTTACACAATCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR GCA 90 bp | AAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCCCAGAACCAGCCCCTTaGCACTGTAAAGTGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVNSQRLPEGSAQGESRIPEPAP*HCKVKG Trigger: GCCTTTCACTTTACAGTGGCAAGGGGCTGGTTCTGG...GATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR CCA 90 bp | CCTGTAGCAACATCTCCAATTGTACAGTGTAAGCCAAAGTCAAATGTGGGGTATAGTCAAGGTCGGAGTTaGGGGCGGGGGCTGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVATSPIVQCKPKSNVGYSQGRS*GRGLRG Trigger: TCCTCTCAGCCCCCGCCCCCAACTCCGACCTTGACT...ATACCCCACATTTGACTTTGGCTTACACTGTACAATTGGAGATGTTGCTACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CCA 90 bp | TGTAAGCCAAAGTCAAATGTGGGGTATATGAAGAAATTCAGAGCATCAGCCAGTCTCAGCCTCCTCTACTaGGCCCCTGGCCCCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: CKPKSNVGYMKKFRASASLSLLY*APGPQL Trigger: CAGTTGGGGGCCAGGGGCCCAGTAGAGGAGGCTGAG...ACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATTTGACTTTGGCTTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR TCA 90 bp | GGTCTGCAAATCAAAGTCAACAGGGCCAGACTGCCAAACGAAACTAAATACAAGTTCTCAACGTCTTCCTaGAGGCAGTGCCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLQIKVNRARLPNETKYKFSTSS*RQCPGR Trigger: TCTCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAA...CTTGTATTTAGTTTCGTTTGGCAGTCTGGCCCTGTTGACTTTGATTTGCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | AAGTCAAATGTGGGGTATATGAAGAAATTCAGAGCATCAGCCAGTTCTCCAGAAAGTGAAAGGCTCCTGTaGGGAGGGCGCTGGGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSNVGYMKKFRASASSPESERLL*GGRWDC Trigger: ACAATCCCAGCGCCCTCCTCACAGGAGCCTTTCACT...TTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATTTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR TCA 90 bp | CCGAATCCAGAGGTCCAGATCCATAGAGTGGAGGTTCTGAGGAGTTGGAAGGAGGAAATTTATTCCTCCTaGATGTATAAGGCAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PNPEVQIHRVEVLRSWKEEIYSS*MYKAGD Trigger: GTCTCCTGCCTTATACATTCAGGAGGAATAAATTTC...CTCCTTCCAACTCCTCAGAACCTCCACTCTATGGATCTGGACCTCTGGATTCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | GGGGTAAGAGCAGGCGGCTGTGAGTCAGGTCAAGGGAGAATTGGTCTGCAAATCTTAGATGTTTTACATTaGCATCACCTCTTCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVRAGGCESGQGRIGLQILDVLH*HHLFLR Trigger: TCTCAGGAAGAGGTGATGGCAATGTAAAACATCTAA...GATTTGCAGACCAATTCTCCCTTGACCTGACTCACAGCCGCCTGCTCTTACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | TGTGTAAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCAAGGGAGAATTGGTCTaGAAATCAAAGTCAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVRSILNVFLKAVPREKAKGELV*KSKSTG Trigger: CCCTGTTGACTTTGATTTGCAGACCAATTCTCCCTT...GGCTTTCTCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTTACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | TTCCCATTGGCAATGCTTGCTACGCTTAATCTGATTGCATCTCAGGGACCTGTATTGCTACGCTTAATCTaGTTGCATCTCAGGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPLAMLATLNLIASQGPVLLRLI*LHLRDL Trigger: CAGGTCCCTGAGATGCAATCAGATTAAGCGTAGCAA...TACAGGTCCCTGAGATGCAATCAGATTAAGCGTAGCAAGCATTGCCAATGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | CCTGTAGCAACATCTCCAATTGTACAGTGTAAGCCAAAGTCAAATGTGGGGTATAACAAGGGCAGTGGATaGAGGGAACGGGGATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVATSPIVQCKPKSNVGYNKGSG*RERGFF Trigger: GAAAAATCCCCGTTCCCTTCATCCACTGCCCTTGTT...ATACCCCACATTTGACTTTGGCTTACACTGTACAATTGGAGATGTTGCTACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | CAGGCGGCTGTGAGTCAGGTCAAGGGAGAATTGGTCTGCAAATCAAAGTCAACAAAACTAAATACAAGCTaGTCCAGGAACCGTCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QAAVSQVKGELVCKSKSTKLNTS*SRNRQL Trigger: AAGTTGACGGTTCCTGGAGCAGCTTGTATTTAGTTT...TGTTGACTTTGATTTGCAGACCAATTCTCCCTTGACCTGACTCACAGCCGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CCA 90 bp | AGTCAGGTCAAGGGAGAATTGGTCTGCAAATCAAAGTCAACAGGGCCAGACTGCGAATTCTACAAGTTCTaGGCTATGTGTAAATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQVKGELVCKSKSTGPDCEFYKF*AMCKCA Trigger: GGCACATTTACACATAGCCCAGAACTTGTAGAATTC...GCAGTCTGGCCCTGTTGACTTTGATTTGCAGACCAATTCTCCCTTGACCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR GCA 90 bp | AAGTCAAATGTGGGGTATATGAAGAAATTCAGAGCATCAGCCAGTTCTCCAGAATCAACAGGGCCAGACTaGCAAACGAAACTAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: KSNVGYMKKFRASASSPESTGPD*QTKLNT Trigger: TGTATTTAGTTTCGTTTGGCAGTCTGGCCCTGTTGA...TTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATTTGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CCA 90 bp | ATTGTACAGTGTAAGCCAAAGTCAAATGTGGGGTATATGAAGAAATTCAGAGCAAAAGAAATTCTTGGCTaGGGATGGGGTAGGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IVQCKPKSNVGYMKKFRAKEILG*GWGRGK Trigger: TTTCCCCCTACCCCATCCCCAGCCAAGAATTTCTTT...TGCTCTGAATTTCTTCATATACCCCACATTTGACTTTGGCTTACACTGTACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR TCA 90 bp | AAGTCAAATGTGGGGTATATGAAGAAATTCAGAGCATCAGCCAGTTCTCCAGAAATGATGACGATATCTTaGAAAGAAATTCTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSNVGYMKKFRASASSPEMMTIS*KEILGW Trigger: CCAGCCAAGAATTTCTTTTCAAGATATCGTCATCAT...TTCTGGAGAACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATTTGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS GCA 90 bp | GGGCCGGCGAGCCCCGCGATCCCGCTAGCGCCCTGGCGCCAGCGCTaGAGCTCCTGGTCCTCGGCCGCGCCTGCTGAAGCCCCAGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GPASPAIPLAPWRQR*SSWSSAAPAEAPAA Trigger: CGCAGCTGGGGCTTCAGCAGGCGCGGCCGAGGACCAGGAGCTGCAGCGCTGGCGCCAGGGCGCTAGCGGGATCGCGGGGCTCGCCGGCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS GCA 90 bp | GCCTGCGCCACGCCGCCGCTCAGGCGGCTCAGGCTCTCCGCGCGGTaGGCCAGGCGCAGCTCGGCCGCCAAGAAAACGCGGTGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ACATPPLRRLRLSAR*ARRSSAAKKTRCSC Trigger: GCAGCTGCACCGCGTTTTCTTGGCGGCCGAGCTGCGCCTGGCGCACCGCGCGGAGAGCCTGAGCCGCCTGAGCGGCGGCGTGGCGCAGGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS CCA 90 bp | AGCCCCGCGATCCCGCTAGCGCCCTGGCGCCAGCGCTGCAGCTCCTaGTCCTCGGCCGCGCCTGCTGAAGCCCCAGCTGCGTCCGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPAIPLAPWRQRCSS*SSAAPAEAPAASGS Trigger: GCTGCCGGACGCAGCTGGGGCTTCAGCAGGCGCGGCCGAGGACCAGGAGCTGCAGCGCTGGCGCCAGGGCGCTAGCGGGATCGCGGGGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS GCA 90 bp | CGGTGCGCCAGGCGCAGCTCGGCCGCCAAGAAAACGCGGTGCAGCTaGAGCACGCGGCTCTCCAGCTCCGACACCAGGCGCCGGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RCARRSSAAKKTRCS*STRLSSSDTRRRRP Trigger: GGGCCGCCGGCGCCTGGTGTCGGAGCTGGAGAGCCGCGTGCTGCAGCTGCACCGCGTTTTCTTGGCGGCCGAGCTGCGCCTGGCGCACCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS GCA 90 bp | TCCGCGCGGTGCGCCAGGCGCAGCTCGGCCGCCAAGAAAACGCGGTaGAGCTGCAGCACGCGGCTCTCCAGCTCCGACACCAGGCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SARCARRSSAAKKTR*SCSTRLSSSDTRRR Trigger: CCGGCGCCTGGTGTCGGAGCTGGAGAGCCGCGTGCTGCAGCTGCACCGCGTTTTCTTGGCGGCCGAGCTGCGCCTGGCGCACCGCGCGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CAA 90 bp | AAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCGCACCTCGGCGAAGCTaGTCGGGGTGGCCAGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KVNSQRLPEGSAQGESRIAPRRS*SGWPGV Trigger: GACCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGC...GATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR CAA 90 bp | CTGGGATTGTGTAAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGAGAGTCAAGGTCGGAGTaGGGGGCGGGGGCTGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLCKVNSQRLPEGSAQGESRSE*GAGAER Trigger: CCTCTCAGCCCCCGCCCCCAACTCCGACCTTGACTC...TCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTTACACAATCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CAA 90 bp | GTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCCAGAGGTCCAGATCCAAGGCAGCAAGGGCACTaGCAAAGTGAACCTCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VFLKAVPREKAESRGPDPRQQGH*QSEPQN Trigger: GTTCTGAGGTTCACTTTGCAAGTGCCCTTGCTGCCT...TGGATCTGGACCTCTGGATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CAA 90 bp | TGTAAGCCAAAGTCAAATGTGGGGTATATGAAGAAATTCAGAGCATCAGCCAGTGCACCTCGGCGAAGCTaGTCGGGGTGGCCAGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CKPKSNVGYMKKFRASASAPRRS*SGWPGV Trigger: GACCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGC...ACTGGCTGATGCTCTGAATTTCTTCATATACCCCACATTTGACTTTGGCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR CAA 90 bp | TGTGTAAGGTCAATTCTCAACGTCTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCAGGAGGGCGCTGGGATaGTGTAAGGTCAATTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CVRSILNVFLKAVPREKARRALG*CKVNSQ Trigger: TTGAGAATTGACCTTACACAATCCCAGCGCCCTCCT...GGCTTTCTCCCTGGGCACTGCCTTCAGGAAGACGTTGAGAATTGACCTTACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS-3UTR CAA 90 bp | CTTCCTGAAGGCAGTGCCCAGGGAGAAAGCCGAATCCAGAGGTCCAGATCCATACTTAGATGTTTTACATaGCCATCACCTCTTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPEGSAQGESRIQRSRSILRCFT*PSPLPE Trigger: CTCAGGAAGAGGTGATGGCAATGTAAAACATCTAAG...TATGGATCTGGACCTCTGGATTCGGCTTTCTCCCTGGGCACTGCCTTCAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CAA 90 bp | ATAGACACAGAGGAAAGGCAGCAAGGGCACTTGCAAAGTGAACCTCAGAACCCCCAGGTCAAGGGAGAATaGGTCTGCAAATCAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IDTEERQQGHLQSEPQNPQVKGE*VCKSKS Trigger: TGACTTTGATTTGCAGACCAATTCTCCCTTGACCTG...GGGGTTCTGAGGTTCACTTTGCAAGTGCCCTTGCTGCCTTTCCTCTGTGTCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CAA 90 bp | TTCCCATTGGCAATGCTTGCTACGCTTAATCTGATTGCATCTCAGGGACCTGTAAGGAGGGCGCTGGGATaGTGTAAGGTCAATTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: FPLAMLATLNLIASQGPVRRALG*CKVNSQ Trigger: TTGAGAATTGACCTTACACAATCCCAGCGCCCTCCT...TACAGGTCCCTGAGATGCAATCAGATTAAGCGTAGCAAGCATTGCCAATGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS-3UTR CAA 90 bp | AGAAAGCCGAATCCAGAGGTCCAGATCCATAGAGTGGAGGTTCTGAGGAGTTGGCAGAACCCCATGCATTaGCCTTACATTATGGAAATT | + |
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Preference number: 5 (lower is better) Translates to: RKPNPEVQIHRVEVLRSWQNPMH*PYIMEI Trigger: AATTTCCATAATGTAAGGCAAATGCATGGGGTTCTG...CCAACTCCTCAGAACCTCCACTCTATGGATCTGGACCTCTGGATTCGGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS GCA 72 bp | AGCCCCGCGATCCCGCTAGCGCCCTGGCGCCAGCGCTaGAGCTCCTGGTCCTCGGCCGCGCCTGCTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SPAIPLAPWRQR*SSWSSAAPAEA Trigger: GGCTTCAGCAGGCGCGGCCGAGGACCAGGAGCTGCAGCGCTGGCGCCAGGGCGCTAGCGGGATCGCGGGGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS CCA 72 bp | ATCCCGCTAGCGCCCTGGCGCCAGCGCTGCAGCTCCTaGTCCTCGGCCGCGCCTGCTGAAGCCCCAGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: IPLAPWRQRCSS*SSAAPAEAPAA Trigger: CGCAGCTGGGGCTTCAGCAGGCGCGGCCGAGGACCAGGAGCTGCAGCGCTGGCGCCAGGGCGCTAGCGGGAT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS CCA 72 bp | GTCGGTCGGTCGGCACCTCGGCGAAGCTTGTCGGGGTaGCCAGGGGTCCGGGCGTGGAGGTCAGCGCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: VGRSAPRRSLSG*PGVRAWRSALR Trigger: CCGCAGCGCTGACCTCCACGCCCGGACCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGACCGAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS CAA 90 bp | AGCCGGCGTCCGCGATCAGTCGGTCGGTCGGCACCTCGGCGAAGCTaGTCGGGGTGGCCAGGGGTCCGGGCGTGGAGGTCAGCGCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: SRRPRSVGRSAPRRS*SGWPGVRAWRSALR Trigger: CCGCAGCGCTGACCTCCACGCCCGGACCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGACCGACTGATCGCGGACGCCGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS CAA 72 bp | CCGCGATCAGTCGGTCGGTCGGCACCTCGGCGAAGCTaGTCGGGGTGGCCAGGGGTCCGGGCGTGGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PRSVGRSAPRRS*SGWPGVRAWRS Trigger: TGACCTCCACGCCCGGACCCCTGGCCACCCCGACAAGCTTCGCCGAGGTGCCGACCGACCGACTGATCGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522111.3 ENST00000531285.1 |
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| CDS GCA 72 bp | AGGCGCAGCTCGGCCGCCAAGAAAACGCGGTGCAGCTaGAGCACGCGGCTCTCCAGCTCCGACACCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RRSSAAKKTRCS*STRLSSSDTRR Trigger: GCGCCTGGTGTCGGAGCTGGAGAGCCGCGTGCTGCAGCTGCACCGCGTTTTCTTGGCGGCCGAGCTGCGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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| CDS GCA 72 bp | TGCGCCAGGCGCAGCTCGGCCGCCAAGAAAACGCGGTaGAGCTGCAGCACGCGGCTCTCCAGCTCCGACACC | + |
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Preference number: 6 (lower is better) Translates to: CARRSSAAKKTR*SCSTRLSSSDT Trigger: GGTGTCGGAGCTGGAGAGCCGCGTGCTGCAGCTGCACCGCGTTTTCTTGGCGGCCGAGCTGCGCCTGGCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522111.3 |
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