RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRMT61A (Homo sapiens)

Ensembl gene IDs: ENSG00000166166

Ensembl transcript IDs: ENST00000299202.4, ENST00000389749.9

Found 496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTGCCTaGCCTCAGCGAGTGCAGCCCATGTCAGGGGCTCTGGCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: LRQTTHSAAPLRSAA*PQRVQPMSGALAGW
Trigger: CCACCCAGCCAGAGCCCCTGACATGGGCTGCACTCGCTGAGGCCAGGCAGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 90 bp TTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTaGCTGGCCTCAGCGAGTGCAGCCCATGTCAGGGGCTCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: LPAADNPLCRSSPQR*LASASAAHVRGSGW
Trigger: CCAGCCAGAGCCCCTGACATGGGCTGCACTCGCTGAGGCCAGGCAGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 90 bp AGCCCCGACACACTTGCCTGGTTGCCTGCGGCAGACAACCCACTCTaGCGCTCCTCTCCGCAGCGCTGCCTGGCCTCAGCGAGTGCAGCC +
Preference number: 1 (lower is better)
Translates to: SPDTLAWLPAADNPL*RSSPQRCLASASAA
Trigger: GGCTGCACTCGCTGAGGCCAGGCAGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 90 bp GGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTaGGTCAGCTCACCCCAGCTTCTGGCCAAGGCTGGAGCCTCGGCC +
Preference number: 1 (lower is better)
Translates to: GWPGLLALGRAGQGF*VSSPQLLAKAGASA
Trigger: GGCCGAGGCTCCAGCCTTGGCCAGAAGCTGGGGTGAGCTGACCCAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR TCA 90 bp ATGCTGGCTCCAGGCCACGTGAGGATCCAAGCTGAGGGAGTGGGGTaGGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGC +
Preference number: 1 (lower is better)
Translates to: MLAPGHVRIQAEGVG*GPAGSRGPYGGGGC
Trigger: GCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTCCCTCAGCTTGGATCCTCACGTGGCCTGGAGCCAGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 90 bp TCACAGGCTGGCATTCACACCCCAGCCCCGACACACTTGCCTGGTTaGCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCT +
Preference number: 1 (lower is better)
Translates to: SQAGIHTPAPTHLPG*LRQTTHSAAPLRSA
Trigger: AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGGGGTGTGAATGCCAGCCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 90 bp TCCGGGACTCACAGGCTGGCATTCACACCCCAGCCCCGACACACTTaGCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCC +
Preference number: 1 (lower is better)
Translates to: SGTHRLAFTPQPRHT*LVACGRQPTLPLLS
Trigger: GGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGGGGTGTGAATGCCAGCCTGTGAGTCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 90 bp TGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCAGACACCATaGAGGCCTTTGCTGTGGCCAGGAGGGGCAGGGCAGGCTTGGGGG +
Preference number: 1 (lower is better)
Translates to: CASKKHLPVSTHQTP*RPLLWPGGAGQAWG
Trigger: CCCCCAAGCCTGCCCTGCCCCTCCTGGCCACAGCAAAGGCCTGCATGGTGTCTGATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 90 bp TGGGTGGGGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTaGGCTGAGCTCAGTGCTGTGACATCAGCCAGGAGGCCAGAGAGC +
Preference number: 1 (lower is better)
Translates to: WVGDAPPLGHEWTKA*AELSAVTSARRPES
Trigger: GCTCTCTGGCCTCCTGGCTGATGTCACAGCACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCCCCACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 90 bp CCCCCGGTGACCCACAGTGTGACACTTCGCAGGGACCAGGCGGCCTaGAGTGGACCCTTCCTTCAGGGGCGCATACAAGTAACCCAGGCA +
Preference number: 1 (lower is better)
Translates to: PPVTHSVTLRRDQAA*SGPFLQGRIQVTQA
Trigger: TGCCTGGGTTACTTGTATGCGCCCCTGAAGGAAGGGTCCACTCCAGGCCGCCTGGTCCCTGCGAAGTGTCACACTGTGGGTCACCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR TCA 90 bp GGAAGCTGGGTCCTGGAAGGAGAGGACAAGCCCTCGGAGCAGGGCTaGGCAACTCTCAGGGACACAGGCCTCCCGGACCACATTAGCCAC +
Preference number: 1 (lower is better)
Translates to: GSWVLEGEDKPSEQG*ATLRDTGLPDHISH
Trigger: GTGGCTAATGTGGTCCGGGAGGCCTGTGTCCCTGAGAGTTGCTCAGCCCTGCTCCGAGGGCTTGTCCTCTCCTTCCAGGACCCAGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR TCA 90 bp AGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTaGCAACTAAGGGTGGGCTGGGACCTCCCGCTCTCCATGTGCGGA +
Preference number: 1 (lower is better)
Translates to: RAAGPRGLTQQLCPM*QLRVGWDLPLSMCG
Trigger: TCCGCACATGGAGAGCGGGAGGTCCCAGCCCACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 90 bp AGCCAGATGGGGGTGGCCACACATTTGCCCCTTTGTCCTGGAGACTaGAGCGCCTATCATGCCAAACCAGGACAGGGAGGAGCAGGGACC +
Preference number: 1 (lower is better)
Translates to: SQMGVATHLPLCPGD*SAYHAKPGQGGAGT
Trigger: GGTCCCTGCTCCTCCCTGTCCTGGTTTGGCATGATAGGCGCTCCAGTCTCCAGGACAAAGGGGCAAATGTGTGGCCACCCCCATCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 90 bp GCTGCCACCAGGGCAACCAGCCCCGGCTGGAAAATGGGCACAACCTaGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGA +
Preference number: 1 (lower is better)
Translates to: AATRATSPGWKMGTT*TLRCLRPMCPINHG
Trigger: TCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTGCCCATTTTCCAGCCGGGGCTGGTTGCCCTGGTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 90 bp GAAGGAGTGGCCTTTTCTGCAGCCAGATGGGGGTGGCCACACATTTaGCCCTTTGTCCTGGAGACTGGAGCGCCTATCATGCCAAACCAG +
Preference number: 1 (lower is better)
Translates to: EGVAFSAARWGWPHI*PFVLETGAPIMPNQ
Trigger: CTGGTTTGGCATGATAGGCGCTCCAGTCTCCAGGACAAAGGGGCAAATGTGTGGCCACCCCCATCTGGCTGCAGAAAAGGCCACTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 90 bp TCTGTGCCCCAGGTGAGTAACAAGGTTAGAAGGGAAGCTGGGTCCTaGAAGGAGAGGACAAGCCCTCGGAGCAGGGCTGAGCAACTCTCA +
Preference number: 1 (lower is better)
Translates to: SVPQVSNKVRREAGS*KERTSPRSRAEQLS
Trigger: TGAGAGTTGCTCAGCCCTGCTCCGAGGGCTTGTCCTCTCCTTCCAGGACCCAGCTTCCCTTCTAACCTTGTTACTCACCTGGGGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 90 bp GACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTaGGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCAGACACCA +
Preference number: 1 (lower is better)
Translates to: DPTVPEAYVSYKPWS*ASKKHLPVSTHQTP
Trigger: TGGTGTCTGATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 90 bp TGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTaGCAACAAACAGCAGCTGGGATGGGCCACAGGGCTGGACAGGAA +
Preference number: 1 (lower is better)
Translates to: WLQHPGEPVAVDTSY*QQTAAGMGHRAGQE
Trigger: TTCCTGTCCAGCCCTGTGGCCCATCCCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 90 bp CCACCTGCACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTaGATACTTCATATTGGCAACAAACAGCAGCTGGGATGGGCCACA +
Preference number: 1 (lower is better)
Translates to: PPAPFGFNTQGSLWQ*ILHIGNKQQLGWAT
Trigger: TGTGGCCCATCCCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTGCAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 90 bp ACTCCCCCACCTGCACCCTTTGGCTTCAACACCCAGGGGAGCCTGTaGCAGTGGATACTTCATATTGGCAACAAACAGCAGCTGGGATGG +
Preference number: 1 (lower is better)
Translates to: TPPPAPFGFNTQGSL*QWILHIGNKQQLGW
Trigger: CCATCCCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTGCAGGTGGGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 90 bp AACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATaGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCAG +
Preference number: 1 (lower is better)
Translates to: NLDPTVPEAYVSYKP*SCASKKHLPVSTHQ
Trigger: CTGATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGCTGGACAGGAATGGCTaGGGCCCAGCCCCAGCACTG +
Preference number: 2 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGLDRNG*GPAPAL
Trigger: CAGTGCTGGGGCTGGGCCTCAGCCATTCCTGTCCAG...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCGCTTCTGGCCAAGGCTaGAGCCTCGGCCCGGGGACT +
Preference number: 2 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAASGQG*SLGPGT
Trigger: AGTCCCCGGGCCGAGGCTCCAGCCTTGGCCAGAAGC...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCACCCGCCTCTTGGACATaGGTGGACGAAGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPPASWT*VDEGLG
Trigger: GCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGG...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCCCTCCACCCCCTTCCTaGTTAGGCCCACCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAPPPPS*LGPPGR
Trigger: CCTCCCAGGTGGGCCTAAGCAGGAAGGGGGTGGAGG...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCGCAGACAACCCACTCTaGCGCTCCTCTCCGCAGCGC +
Preference number: 2 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAADNPL*RSSPQR
Trigger: GCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGC...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGGCTTCTGGCCAAGGCTaGAGCCTCGGCCCGGGGACT +
Preference number: 2 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRASGQG*SLGPGT
Trigger: AGTCCCCGGGCCGAGGCTCCAGCCTTGGCCAGAAGC...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAGCTCACCCCAGCTTCTaGCCAAGGCTGGAGCCTCGG +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPAHPSF*PRLEPR
Trigger: CCGAGGCTCCAGCCTTGGCCAGAAGCTGGGGTGAGC...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAGTTCCTGGGCTGGCCTaGTCTCCTAGCGCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPVPGLA*SPSAGE
Trigger: CTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CAA 90 bp CTCACAGGCTGGCATTCACACCCCAGCCCCGACACACTTGCCTGGTaGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGC +
Preference number: 2 (lower is better)
Translates to: LTGWHSHPSPDTLAW*PAADNPLCRSSPQR
Trigger: GCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGGGGTGTGAATGCCAGCCTGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCACCCCAGGGACAGCCTaGCCCCAAAGCTCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDATPGTA*PQSSWH
Trigger: ATGCCAGGAGCTTTGGGGTCAGGCTGTCCCTGGGGT...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGCCAGCCTGGGCGTCCTaGCCTCTGTCCCCACTTTGG +
Preference number: 2 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRPAWAS*PLSPLW
Trigger: CCAAAGTGGGGACAGAGGGCAGGACGCCCAGGCTGG...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCTGGTCTCAGGCCCCGTaGGGCAGCCAGGGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPWSQAP*GSQGRG
Trigger: CCCACGGCCCTGGCTGCCCCACGGGGCCTGAGACCA...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTGTTCCTGGGCTGGCCTaGTCTCCTAGCGCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAVPGLA*SPSAGE
Trigger: CTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAGACAGCAGCTGGGGGTaGCCTTGGCTGCTAGGGATC +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPDSSWG*PWLLGI
Trigger: GATCCCTAGCAGCCAAGGCCACCCCCAGCTGCTGTC...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAGGCCTAGACAGCAGCTaGGGGTGGCCTTGGCTGCTA +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPGLDSS*GWPWLL
Trigger: TAGCAGCCAAGGCCACCCCCAGCTGCTGTCTAGGCC...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAGACGAAGGCCTGGGCTaGGCTCAGTGCTGTGACATC +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPDEGLG*AQCCDI
Trigger: GATGTCACAGCACTGAGCTCAGCCCAGGCCTTCGTC...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCACCCAGGCAGCCACACTaGATTCCAGCCCAGGACTGT +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPPRQPH*IPAQDC
Trigger: ACAGTCCTGGGCTGGAATTCAGTGTGGCTGCCTGGG...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGTGCCTCTGGCCTCCCTaGCCAGCCCTTCAGTGCTCC +
Preference number: 2 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVCLWPP*PALQCS
Trigger: GGAGCACTGAAGGGCTGGGCAGGGAGGCCAGAGGCA...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGTCCTCTCCGCAGCGCTaGCTGGCCTCAGCGAGTGCA +
Preference number: 2 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGESSPQR*LASASA
Trigger: TGCACTCGCTGAGGCCAGGCAGCGCTGCGGAGAGGA...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAGGGTGGTGTCCTGAATaGACCTCCCCTACCCCACAC +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPGWCPE*TSPTPH
Trigger: GTGTGGGGTAGGGGAGGTGCATTCAGGACACCACCC...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGGGGTCAGACGCAGCGTaGTCTCAGGGTCAATGCCCC +
Preference number: 2 (lower is better)
Translates to: VPGLAWSPSAGESRAGILGSDAA*SQGQCP
Trigger: GGGGCATTGACCCTGAGACCACGCTGCGTCTGACCC...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGTGGAGAAGCACGAGATaGTCTCAGGCCCCGTGGGGC +
Preference number: 2 (lower is better)
Translates to: VPGLAWSPSAGESRAGILWRSTR*SQAPWG
Trigger: GCCCCACGGGGCCTGAGACCATCTCGTGCTTCTCCA...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGCCTCGGCCCGGGGACTaGAGAAGCACGAGATGGTCT +
Preference number: 2 (lower is better)
Translates to: VPGLAWSPSAGESRAGILPRPGD*RSTRWS
Trigger: AGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGG...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTCCTCGGCCCGGGGACTaGAGAAGCACGAGATGGTCT +
Preference number: 2 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAPRPGD*RSTRWS
Trigger: AGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGG...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGGCTCACCCCAGCTTCTaGCCAAGGCTGGAGCCTCGG +
Preference number: 2 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVAHPSF*PRLEPR
Trigger: CCGAGGCTCCAGCCTTGGCCAGAAGCTGGGGTGAGC...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCGAGTGGACGAAGGCCTaGGCTGAGCTCAGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAEWTKA*AELSAV
Trigger: CACAGCACTGAGCTCAGCCCAGGCCTTCGTCCACTC...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACCTCCGCAGCGCTGCCTaGCCTCAGCGAGTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDLRSAA*PQRVQP
Trigger: GGGCTGCACTCGCTGAGGCCAGGCAGCGCTGCGGAG...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCACCCGACACACTTGCCTaGTTGCCTGCGGCAGACAAC +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPPDTLA*LPAADN
Trigger: GTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGG...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCATCCAGCCCAGGACTGTaGAAGAAGGCCCAGCACTCC +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPSSPGL*KKAQHS
Trigger: GGAGTGCTGGGCCTTCTTCCACAGTCCTGGGCTGGA...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCCATGTTGAACCTGACTaGGGGCCCCTCCTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAHVEPD*GPLLCA
Trigger: GGCACAGAGGAGGGGCCCCCAGTCAGGTTCAACATG...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCCAACTAAGGGTGGGCTaGGACCTCCCGCTCTCCATG +
Preference number: 2 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAQLRVG*DLPLSM
Trigger: CATGGAGAGCGGGAGGTCCCAGCCCACCCTTAGTTG...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CAA 90 bp TTCCGGGACTCACAGGCTGGCATTCACACCCCAGCCCCGACACACTaGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: FRDSQAGIHTPAPTH*PGCLRQTTHSAAPL
Trigger: GAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGGGGTGTGAATGCCAGCCTGTGAGTCCCGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGCTGAGCTCAGTGCTGTaGCATCAGCCAGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRLSSVL*HQPGGQ
Trigger: CTGGCCTCCTGGCTGATGTCACAGCACTGAGCTCAG...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAACTTGCCTGGTTGCCTaGGGCAGACAACCCACTCTG +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPTCLVA*GRQPTL
Trigger: CAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGT...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTGCAACAAACAGCAGCTaGGATGGGCCACAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAATNSS*DGPQGW
Trigger: CCAGCCCTGTGGCCCATCCCAGCTGCTGTTTGTTGC...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCCCTCCACCCCCTTCCTaGTTAGGCCCACCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPPPPPS*LGPPGR
Trigger: CCTCCCAGGTGGGCCTAAGCAGGAAGGGGGTGGAGG...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACCCTGGCCTCAGCGAGTaGAGCCCATGTCAGGGGCTC +
Preference number: 2 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDPGLSE*SPCQGL
Trigger: GAGCCCCTGACATGGGCTGCACTCGCTGAGGCCAGG...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGAAACAGCAGCTGGGATaGGCCACAGGGCTGGACAGG +
Preference number: 2 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEKQQLG*ATGLDR
Trigger: CCTGTCCAGCCCTGTGGCCCATCCCAGCTGCTGTTT...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCCTGCTTAGGCCCACCTaGGAGGGGGTCAGACTCCCC +
Preference number: 2 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPLLRPT*EGVRLP
Trigger: GGGGAGTCTGACCCCCTCCCAGGTGGGCCTAAGCAG...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTCAGCCACTGGCTGCCTaGGCAGAAACCCAGGCCCCC +
Preference number: 2 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCQPLAA*AETQAP
Trigger: GGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTG...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAAAAATGGGCACAACCTaGACCCTACGGTGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPKMGTT*TLRCLR
Trigger: CCTCAGGCACCGTAGGGTCCAGGTTGTGCCCATTTT...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTTCTGGCAGGCATCGCTaGCCATATAAGGTGCCTCTG +
Preference number: 2 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSASGRHR*PYKVPL
Trigger: CAGAGGCACCTTATATGGTCAGCGATGCCTGCCAGA...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACCAAGGGCCCCATGGCTaGCACAGGCACTGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDQGPHG*HRHCSF
Trigger: GAAGGAGCAGTGCCTGTGTCAGCCATGGGGCCCTTG...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTTCAGACTCCCCCACCTaGACCCTTTGGCTTCAACAC +
Preference number: 2 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSASDSPT*TLWLQH
Trigger: GTGTTGAAGCCAAAGGGTGCAGGTGGGGGAGTCTGA...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGCCCACCGTCTGTGTCTaGCAGGCATCGCTGACCATA +
Preference number: 2 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEPTVCV*QASLTI
Trigger: TATGGTCAGCGATGCCTGCCAGACACAGACGGTGGG...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTCTGCTTAGGCCCACCTaGGAGGGGGTCAGACTCCCC +
Preference number: 2 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCLLRPT*EGVRLP
Trigger: GGGGAGTCTGACCCCCTCCCAGGTGGGCCTAAGCAG...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGACACCGTTGTCACTGTaGAGGGACCTCCTCCATGCC +
Preference number: 2 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGETPLSL*RDLLHA
Trigger: GGCATGGAGGAGGTCCCTCCACAGTGACAACGGTGT...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCATTTGCCCCTTTGTCCTaGAGACTGGAGCGCCTATCA +
Preference number: 2 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPFAPLS*RLERLS
Trigger: TGATAGGCGCTCCAGTCTCCAGGACAAAGGGGCAAA...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCGACGAAGGCCTGGGCTaGGCTCAGTGCTGTGACATC +
Preference number: 2 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPDEGLG*AQCCDI
Trigger: GATGTCACAGCACTGAGCTCAGCCCAGGCCTTCGTC...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTTGCCTCTGGCCTCCCTaGCCAGCCCTTCAGTGCTCC +
Preference number: 2 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTCLWPP*PALQCS
Trigger: GGAGCACTGAAGGGCTGGGCAGGGAGGCCAGAGGCA...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAGCAGACAACCCACTCTaGCGCTCCTCTCCGCAGCGC +
Preference number: 2 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSADNPL*RSSPQR
Trigger: GCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGC...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCCTGGACAGGAATGGCTaGGGCCCAGCCCCAGCACTG +
Preference number: 2 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSLDRNG*GPAPAL
Trigger: CAGTGCTGGGGCTGGGCCTCAGCCATTCCTGTCCAG...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCCCTCGGAGCAGGGCTaGGCAACTCTCAGGGACACA +
Preference number: 2 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAPSEQG*ATLRDT
Trigger: TGTGTCCCTGAGAGTTGCTCAGCCCTGCTCCGAGGG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGGCGTCACCCAGTTCATaGCACCCCAGGGACAGCCTG +
Preference number: 2 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAASPSS*HPRDSL
Trigger: CAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGC...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTTCCTCTCCGCAGCGCTaGCTGGCCTCAGCGAGTGCA +
Preference number: 2 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGSSPQR*LASASA
Trigger: TGCACTCGCTGAGGCCAGGCAGCGCTGCGGAGAGGA...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCACACACTTGCCTGGTTaGCTGCGGCAGACAACCCAC +
Preference number: 2 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPTHLPG*LRQTTH
Trigger: GTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGT...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACCCCACCGTCTGTGTCTaGCAGGCATCGCTGACCATA +
Preference number: 2 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDPTVCV*QASLTI
Trigger: TATGGTCAGCGATGCCTGCCAGACACAGACGGTGGG...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTGGCACTGTCCCTGGGTaGTGTCCTGAATGCACCTCC +
Preference number: 2 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCGTVPG*CPECTS
Trigger: GGAGGTGCATTCAGGACACCACCCAGGGACAGTGCC...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTGACAGCAGCTGGGGGTaGCCTTGGCTGCTAGGGATC +
Preference number: 2 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTDSSWG*PWLLGI
Trigger: GATCCCTAGCAGCCAAGGCCACCCCCAGCTGCTGTC...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGTGCCCTTGGCTTCTGTaGGGGGTAGGGGTACCCACA +
Preference number: 2 (lower is better)
Translates to: TWTLRCLRPMCPINHGAACPWLL*GVGVPT
Trigger: TGTGGGTACCCCTACCCCTCACAGAAGCCAAGGGCA...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCAAGGGCCCCATGGCTaGCACAGGCACTGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGQGPHG*HRHCSF
Trigger: GAAGGAGCAGTGCCTGTGTCAGCCATGGGGCCCTTG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTCCCAGGCAGCCACACTaGATTCCAGCCCAGGACTGT +
Preference number: 2 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTPRQPH*IPAQDC
Trigger: ACAGTCCTGGGCTGGAATTCAGTGTGGCTGCCTGGG...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTACCCCAGGGACAGCCTaGCCCCAAAGCTCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGTPGTA*PQSSWH
Trigger: ATGCCAGGAGCTTTGGGGTCAGGCTGTCCCTGGGGT...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTACACACTTGCCTGGTTaGCTGCGGCAGACAACCCAC +
Preference number: 2 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCTHLPG*LRQTTH
Trigger: GTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGT...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCTATAAACCATGGAGCTaGGCCTCAAAGAAACACCTC +
Preference number: 2 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAYKPWS*ASKKHL
Trigger: GAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATA...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGACCCAGGGGAGCCTGTaGCAGTGGATACTTCATATT +
Preference number: 2 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGETQGSL*QWILHI
Trigger: AATATGAAGTATCCACTGCCACAGGCTCCCCTGGGT...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGACCCAGGGGAGCCTGTaGCAGTGGATACTTCATATT +
Preference number: 2 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVTQGSL*QWILHI
Trigger: AATATGAAGTATCCACTGCCACAGGCTCCCCTGGGT...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTGGGTCAGACGCAGCGTaGTCTCAGGGTCAATGCCCC +
Preference number: 2 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGGSDAA*SQGQCP
Trigger: GGGGCATTGACCCTGAGACCACGCTGCGTCTGACCC...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAGCAGGGCAGGGATTCTaGGTCAGCTCACCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSAGQGF*VSSPQL
Trigger: AAGCTGGGGTGAGCTGACCCAGAATCCCTGCCCTGC...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTGAGTGGACGAAGGCCTaGGCTGAGCTCAGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTEWTKA*AELSAV
Trigger: CACAGCACTGAGCTCAGCCCAGGCCTTCGTCCACTC...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTGGCACTGTCCCTGGGTaGTGTCCTGAATGCACCTCC +
Preference number: 2 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTGTVPG*CPECTS
Trigger: GGAGGTGCATTCAGGACACCACCCAGGGACAGTGCC...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTCTCATCACTCACACTTaGGGCCAGGCCCCTGCTAGC +
Preference number: 2 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTLITHT*GQAPAS
Trigger: GCTAGCAGGGGCCTGGCCCCAAGTGTGAGTGATGAG...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTGCAGCCAGATGGGGGTaGCCACACATTTGCCCCTTT +
Preference number: 2 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCAARWG*PHICPF
Trigger: AAAGGGGCAAATGTGTGGCCACCCCCATCTGGCTGC...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTCATGTTGAACCTGACTaGGGGCCCCTCCTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTHVEPD*GPLLCA
Trigger: GGCACAGAGGAGGGGCCCCCAGTCAGGTTCAACATG...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTGCTGACCATATAAGGTaGCTCTGGCCTCCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTADHIR*LWPPCP
Trigger: TGGGCAGGGAGGCCAGAGGCACCTTATATGGTCAGC...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAGCTGACCATATAAGGTaGCTCTGGCCTCCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSADHIR*LWPPCP
Trigger: TGGGCAGGGAGGCCAGAGGCACCTTATATGGTCAGC...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTACTTGCCTGGTTGCCTaGGGCAGACAACCCACTCTG +
Preference number: 2 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTTCLVA*GRQPTL
Trigger: CAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGT...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCAGCCCCGACACACTTaGCTGGTTGCCTGCGGCAGA +
Preference number: 2 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHQPRHT*LVACGR
Trigger: TCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTG...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCCCCACCTGCACCCTTTaGCTTCAACACCCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSPTCTL*LQHPGE
Trigger: CTCCCCTGGGTGTTGAAGCCAAAGGGTGCAGGTGGG...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGACACCGTTGTCACTGTaGAGGGACCTCCTCCATGCC +
Preference number: 2 (lower is better)
Translates to: TWTLRCLRPMCPINHGAATPLSL*RDLLHA
Trigger: GGCATGGAGGAGGTCCCTCCACAGTGACAACGGTGT...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CAA 90 bp TTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATaGGCAACAAACAGCAGCTGGGATGGGCCACAGGGCTGGACAGGA +
Preference number: 2 (lower is better)
Translates to: LASTPRGACGSGYFI*ATNSSWDGPQGWTG
Trigger: TCCTGTCCAGCCCTGTGGCCCATCCCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATTGCCCTTGGCTTCTGTaGGGGGTAGGGGTACCCACA +
Preference number: 2 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHCPWLL*GVGVPT
Trigger: TGTGGGTACCCCTACCCCTCACAGAAGCCAAGGGCA...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCCTCTGTGCCCCAGGTaGGTAACAAGGTTAGAAGGG +
Preference number: 2 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAPLCPR*VTRLEG
Trigger: CCCTTCTAACCTTGTTACTCACCTGGGGCACAGAGG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCTGGAGCGCCTATCATaGCAAACCAGGACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGLERLS*QTRTGR
Trigger: CCTCCCTGTCCTGGTTTGGCATGATAGGCGCTCCAG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATAAACAGCAGCTGGGATaGGCCACAGGGCTGGACAGG +
Preference number: 2 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHKQQLG*ATGLDR
Trigger: CCTGTCCAGCCCTGTGGCCCATCCCAGCTGCTGTTT...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTGCAGCCAGATGGGGGTaGCCACACATTTGCCCCTTT +
Preference number: 2 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGAARWG*PHICPF
Trigger: AAAGGGGCAAATGTGTGGCCACCCCCATCTGGCTGC...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTTTTTCTGCAGCCAGATaGGGGTGGCCACACATTTGC +
Preference number: 2 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCFSAAR*GWPHIC
Trigger: GCAAATGTGTGGCCACCCCCATCTGGCTGCAGAAAA...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTAACCCCAGGAAGGAGTaGCCTTTTCTGCAGCCAGAT +
Preference number: 2 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCNPRKE*PFLQPD
Trigger: ATCTGGCTGCAGAAAAGGCCACTCCTTCCTGGGGTT...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTCTGGCAGGCATCGCTaGCCATATAAGGTGCCTCTG +
Preference number: 2 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSSGRHR*PYKVPL
Trigger: CAGAGGCACCTTATATGGTCAGCGATGCCTGCCAGA...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR GCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGGAGATCTCAGGGGTGTaGGTCACCCAGTTCATGACA +
Preference number: 2 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAEISGV*VTQFMT
Trigger: TGTCATGAACTGGGTGACGCACACCCCTGAGATCTC...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCCTCTTGGACATGAGTaGACGAAGGCCTGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHPLGHE*TKAWAE
Trigger: CTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGG...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACGTGGATACTTCATATTaGCAACAAACAGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDVDTSY*QQTAAG
Trigger: CCCAGCTGCTGTTTGTTGCCAATATGAAGTATCCAC...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCTTTGTCCTGGAGACTaGAGCGCCTATCATGCCAAA +
Preference number: 2 (lower is better)
Translates to: TWTLRCLRPMCPINHGAALCPGD*SAYHAK
Trigger: TTTGGCATGATAGGCGCTCCAGTCTCCAGGACAAAG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR TCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGTTAGCCTTTAAGAGGTaGTCACATAGGCACTGTCCC +
Preference number: 2 (lower is better)
Translates to: TWTLRCLRPMCPINHGAALAFKR*SHRHCP
Trigger: GGGACAGTGCCTATGTGATCACCTCTTAAAGGCTAA...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCGGGAGCCTGTGGCAGTaGATACTTCATATTGGCAAC +
Preference number: 2 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSGSLWQ*ILHIGN
Trigger: GTTGCCAATATGAAGTATCCACTGCCACAGGCTCCC...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTGGGAGCCTGTGGCAGTaGATACTTCATATTGGCAAC +
Preference number: 2 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGGSLWQ*ILHIGN
Trigger: GTTGCCAATATGAAGTATCCACTGCCACAGGCTCCC...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTGTGGATACTTCATATTaGCAACAAACAGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTVDTSY*QQTAAG
Trigger: CCCAGCTGCTGTTTGTTGCCAATATGAAGTATCCAC...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCCTCTGTCCCCACTTTaGGAAATGCCCCTAAGCTTA +
Preference number: 2 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHPLSPL*EMPLSL
Trigger: TAAGCTTAGGGGCATTTCCCAAAGTGGGGACAGAGG...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCACCAGCCCCGACACACTaGCCTGGTTGCCTGCGGCAG +
Preference number: 3 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPPAPTH*PGCLRQ
Trigger: CTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGG...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 72 bp GCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTaGCTGGCCTCAGCGAGTGCAGCCCATGTCAGGGGC +
Preference number: 3 (lower is better)
Translates to: ADNPLCRSSPQR*LASASAAHVRG
Trigger: GCCCCTGACATGGGCTGCACTCGCTGAGGCCAGGCAGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 72 bp ACACTTGCCTGGTTGCCTGCGGCAGACAACCCACTCTaGCGCTCCTCTCCGCAGCGCTGCCTGGCCTCAGCG +
Preference number: 3 (lower is better)
Translates to: TLAWLPAADNPL*RSSPQRCLASA
Trigger: CGCTGAGGCCAGGCAGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR TCA 72 bp CCAGGCCACGTGAGGATCCAAGCTGAGGGAGTGGGGTaGGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGG +
Preference number: 3 (lower is better)
Translates to: PGHVRIQAEGVG*GPAGSRGPYGG
Trigger: CCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTCCCTCAGCTTGGATCCTCACGTGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 72 bp GGCATTCACACCCCAGCCCCGACACACTTGCCTGGTTaGCTGCGGCAGACAACCCACTCTGCCGCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: GIHTPAPTHLPG*LRQTTHSAAPL
Trigger: GAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGGGGTGTGAATGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 72 bp CACAGGCTGGCATTCACACCCCAGCCCCGACACACTTaGCTGGTTGCCTGCGGCAGACAACCCACTCTGCCG +
Preference number: 3 (lower is better)
Translates to: HRLAFTPQPRHT*LVACGRQPTLP
Trigger: CGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGGGGTGTGAATGCCAGCCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 72 bp GGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTaGGTCAGCTCACCCCAGCTTCTGGCCAAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: GLLALGRAGQGF*VSSPQLLAKAG
Trigger: TCCAGCCTTGGCCAGAAGCTGGGGTGAGCTGACCCAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 72 bp GGCTGGGTGGGGGATGCCCCGCCTCTTGGACATGAGTaGACGAAGGCCTGGGCTGAGCTCAGTGCTGTGACA +
Preference number: 3 (lower is better)
Translates to: GWVGDAPPLGHE*TKAWAELSAVT
Trigger: TGTCACAGCACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCCCCACCCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTCCAGCCCCGACACACTaGCCTGGTTGCCTGCGGCAG +
Preference number: 3 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTPAPTH*PGCLRQ
Trigger: CTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGG...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR TCA 72 bp GGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTaGCAACTAAGGGTGGGCTGGGACCTCCCGCTCTCC +
Preference number: 3 (lower is better)
Translates to: GPRGLTQQLCPM*QLRVGWDLPLS
Trigger: GGAGAGCGGGAGGTCCCAGCCCACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 72 bp TTTGCCCCTTTGTCCTGGAGACTGGAGCGCCTATCATaGCAAACCAGGACAGGGAGGAGCAGGGACCAGGGG +
Preference number: 3 (lower is better)
Translates to: FAPLSWRLERLS*QTRTGRSRDQG
Trigger: CCCCTGGTCCCTGCTCCTCCCTGTCCTGGTTTGGCATGATAGGCGCTCCAGTCTCCAGGACAAAGGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTCCCCACCTGCACCCTTaGGCTTCAACACCCAGGGGA +
Preference number: 3 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTPHLHP*ASTPRG
Trigger: TCCCCTGGGTGTTGAAGCCAAAGGGTGCAGGTGGGG...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTGACACACTTGCCTGGTaGCCTGCGGCAGACAACCCA +
Preference number: 3 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCDTLAW*PAADNP
Trigger: TGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTC...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTGGGGTGGCCACACATTaGCCCCTTTGTCCTGGAGAC +
Preference number: 3 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCGVATH*PLCPGD
Trigger: GTCTCCAGGACAAAGGGGCAAATGTGTGGCCACCCC...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 72 bp GGGGTGGCCACACATTTGCCCCTTTGTCCTGGAGACTaGAGCGCCTATCATGCCAAACCAGGACAGGGAGGA +
Preference number: 3 (lower is better)
Translates to: GVATHLPLCPGD*SAYHAKPGQGG
Trigger: TCCTCCCTGTCCTGGTTTGGCATGATAGGCGCTCCAGTCTCCAGGACAAAGGGGCAAATGTGTGGCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCCCCACCTGCACCCTTaGGCTTCAACACCCAGGGGA +
Preference number: 3 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGPHLHP*ASTPRG
Trigger: TCCCCTGGGTGTTGAAGCCAAAGGGTGCAGGTGGGG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGACCTCCTCCATGCCCTaGGCTTCTGTGAGGGGTAGG +
Preference number: 3 (lower is better)
Translates to: TWTLRCLRPMCPINHGAATSSMP*ASVRGR
Trigger: CCTACCCCTCACAGAAGCCAAGGGCATGGAGGAGGT...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCCCTACCCCACACCGTaGTCACTGTGGAGGGACCTC +
Preference number: 3 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGPYPTP*SLWRDL
Trigger: GAGGTCCCTCCACAGTGACAACGGTGTGGGGTAGGG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTGGGGTGGCCACACATTaGCCCCTTTGTCCTGGAGAC +
Preference number: 3 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTGVATH*PLCPGD
Trigger: GTCTCCAGGACAAAGGGGCAAATGTGTGGCCACCCC...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGTCACCCACTTCCATGTaGAACCTGACTGGGGGCCCC +
Preference number: 3 (lower is better)
Translates to: TWTLRCLRPMCPINHGAASPTSM*NLTGGP
Trigger: GGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGA...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTACACCATGCAGGCCTTaGCTGTGGCCAGGAGGGGCA +
Preference number: 3 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGTPCRP*LWPGGA
Trigger: TGCCCCTCCTGGCCACAGCAAAGGCCTGCATGGTGT...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATGGGATGCCCCGCCTCTaGGACATGAGTGGACGAAGG +
Preference number: 3 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHGMPRL*DMSGRR
Trigger: CCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 72 bp GCCTTTTCTGCAGCCAGATGGGGGTGGCCACACATTTaGCCCTTTGTCCTGGAGACTGGAGCGCCTATCATG +
Preference number: 3 (lower is better)
Translates to: AFSAARWGWPHI*PFVLETGAPIM
Trigger: CATGATAGGCGCTCCAGTCTCCAGGACAAAGGGGCAAATGTGTGGCCACCCCCATCTGGCTGCAGAAAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 72 bp CACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTaGCAACAAACAGCAGCTGGGATGGGCCACAGGGCT +
Preference number: 3 (lower is better)
Translates to: HPGEPVAVDTSY*QQTAAGMGHRA
Trigger: AGCCCTGTGGCCCATCCCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 72 bp AGGGGGACGGTACGTTTATTGCTCATCACTCACACTTaGGGCCAGGCCCCTGCTAGCATAGCACTCAAGGCC +
Preference number: 3 (lower is better)
Translates to: RGTVRLLLITHT*GQAPASIALKA
Trigger: GGCCTTGAGTGCTATGCTAGCAGGGGCCTGGCCCCAAGTGTGAGTGATGAGCAATAAACGTACCGTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGAGTGGATACTTCATATaGGCAACAAACAGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGESGYFI*ATNSSW
Trigger: CCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACT...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 72 bp CCTTTAAGAGGTGATCACATAGGCACTGTCCCTGGGTaGTGTCCTGAATGCACCTCCCCTACCCCACACCGT +
Preference number: 3 (lower is better)
Translates to: PLRGDHIGTVPG*CPECTSPTPHR
Trigger: ACGGTGTGGGGTAGGGGAGGTGCATTCAGGACACCACCCAGGGACAGTGCCTATGTGATCACCTCTTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 72 bp CCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATaGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCC +
Preference number: 3 (lower is better)
Translates to: PTVPEAYVSYKP*SCASKKHLPVS
Trigger: GGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCCCTCTGTCCCCACTTaGGGAAATGCCCCTAAGCTT +
Preference number: 3 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGPSVPT*GNAPKL
Trigger: AAGCTTAGGGGCATTTCCCAAAGTGGGGACAGAGGG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR GCA 72 bp GTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTaGGCCTCAAAGAAACACCTCCCGGTGTCCACCCAT +
Preference number: 3 (lower is better)
Translates to: VPEAYVSYKPWS*ASKKHLPVSTH
Trigger: ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 72 bp CCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTaGATACTTCATATTGGCAACAAACAGCAGCTGGGA +
Preference number: 3 (lower is better)
Translates to: PFGFNTQGSLWQ*ILHIGNKQQLG
Trigger: TCCCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CCA 72 bp CCTGCACCCTTTGGCTTCAACACCCAGGGGAGCCTGTaGCAGTGGATACTTCATATTGGCAACAAACAGCAG +
Preference number: 3 (lower is better)
Translates to: PAPFGFNTQGSL*QWILHIGNKQQ
Trigger: CTGCTGTTTGTTGCCAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR-3UTR CAA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAGTGGATACTTCATATaGGCAACAAACAGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTSGYFI*ATNSSW
Trigger: CCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACT...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCGCCCGCCTTCGACCTTaGGGGCGTCCCAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAARLRP*GRPRRG
Trigger: GCCACGCCTGGGACGCCCTCAAGGTCGAAGGCGGGC...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGCGGCAGGGCCATCTGTaGCTGTGCCCAGGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGRQGHL*LCPGRA
Trigger: CGCCCGACCTGGGCACAGGCACAGATGGCCCTGCCG...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCCGCTGCGGAAGGGGCTaGTGTCGGAGCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDARCGRG*CRSRQG
Trigger: GCCCTGCCGGCTCCGACACCAGCCCCTTCCGCAGCG...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGGCCCGCCTTCGACCTTaGGGGCGTCCCAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILARLRP*GRPRRG
Trigger: GCCACGCCTGGGACGCCCTCAAGGTCGAAGGCGGGC...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGGGGACACAGAGCCACTaGCGGTGCCTGCGACGCTCC +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGGTQSH*RCLRRS
Trigger: GGAGCGTCGCAGGCACCGGCAGTGGCTCTGTGTCCC...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299202.4
CDS-3UTR GCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGCAAGGGCCAAGGACCTaGGACGCTCCTGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGQGPRT*DAPAAG
Trigger: CCCGGCAGCAGGAGCGTCGCAGGTCCTTGGCCCTTG...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR GCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGCCGGGTCTGGGTCTGTaGCCCACGCTGCACACGCAC +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGPGLGL*PTLHTH
Trigger: GTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGG...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCGCCCAGGTCGGGCGGTaGCAGGCTGACAGTGCGCAC +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAAQVGR*QADSAH
Trigger: GTGCGCACTGTCAGCCTGCCACCGCCCGACCTGGGC...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGGGCGGCCCCCTAGCCTaGGGTCTTGGTGGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGGGPLA*GLGGEG
Trigger: ACCTTCGCCACCAAGACCCCAGGCTAGGGGGCCGCC...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCACTCCGCAGCGCTGCCTaGCCTCAGCGAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPLRSAA*PQRVQP
Trigger: GGGCTGCACTCGCTGAGGCCAGGCAGCGCTGCGGAG...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCCTCCGCAGCGCTGCCTaGCCTCAGCGAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDALRSAA*PQRVQP
Trigger: GGGCTGCACTCGCTGAGGCCAGGCAGCGCTGCGGAG...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGCGTGAGGATCCAAGCTaGGGGAGTGGGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGREDPS*GSGVRP
Trigger: GGGCCTCACCCCACTCCCTCAGCTTGGATCCTCACG...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCTGCCTGCGACGCTCCTaGTGCCGGGGCTCCACACGT +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDACLRRS*CRGSTR
Trigger: ACGTGTGGAGCCCCGGCAGCAGGAGCGTCGCAGGCA...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299202.4
CDS-3UTR GCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCCAGCGGCCCACACGGTaGTCCTGGAACTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAQRPTR*SWNSSR
Trigger: CCGGGAGGAGTTCCAGGAGCACCGTGTGGGCCGCTG...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGACGGCGTCGGCCACGTaGCTCACGCCAAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGTASAT*LTPKPL
Trigger: CAGTGGCTTTGGCGTGAGCCACGTGGCCGACGCCGT...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGGCCCAGGTCGGGCGGTaGCAGGCTGACAGTGCGCAC +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRAQVGR*QADSAH
Trigger: GTGCGCACTGTCAGCCTGCCACCGCCCGACCTGGGC...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGCGCTGCGGAAGGGGCTaGTGTCGGAGCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGERCGRG*CRSRQG
Trigger: GCCCTGCCGGCTCCGACACCAGCCCCTTCCGCAGCG...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCCCACGGCCTCCTTCATaGGCGTGCCGCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAPRPPS*ACRCGR
Trigger: CCTTCCGCAGCGGCACGCCCATGAAGGAGGCCGTGG...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGGCTCACCCCAGCTTCTaGCCAAGGCTGGAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGAHPSF*PRLEPR
Trigger: CCGAGGCTCCAGCCTTGGCCAGAAGCTGGGGTGAGC...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCACGGGCGGTGGCAGGCTaGCAGTGCGCACGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPRAVAG*QCARCR
Trigger: TCTACAACGTGCGCACTGTCAGCCTGCCACCGCCCG...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCACTGGACAGGAATGGCTaGGGCCCAGCCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPLDRNG*GPAPAL
Trigger: CAGTGCTGGGGCTGGGCCTCAGCCATTCCTGTCCAG...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGCTGCGACGCTCCTGCTaGCGGGGCTCCACACGTGCC +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGELRRSC*RGSTRA
Trigger: GGCACGTGTGGAGCCCCGGCAGCAGGAGCGTCGCAG...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGGGCCATCTGTGCCTGTaGCCAGGTCGGGCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILGHLCL*PGRAVA
Trigger: TGCCACCGCCCGACCTGGGCACAGGCACAGATGGCC...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCATGCCTCTGGCCTCCCTaGCCAGCCCTTCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPCLWPP*PALQCS
Trigger: GGAGCACTGAAGGGCTGGGCAGGGAGGCCAGAGGCA...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAGCAGACAACCCACTCTaGCGCTCCTCTCCGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPADNPL*RSSPQR
Trigger: GCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGC...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTCCACGGCCTCCTTCATaGGCGTGCCGCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAPRPPS*ACRCGR
Trigger: CCTTCCGCAGCGGCACGCCCATGAAGGAGGCCGTGG...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGGGCCGCACGTCACCTTaGAGCCGAAGGGGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEGRTSP*SRRGGR
Trigger: TCGGCCGCCCCTTCGGCTCCAAGGTGACGTGCGGCC...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR TCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGCAGGGTGCTCAGCTCTaGGAAGCCGCGCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVQGAQL*EAARCQ
Trigger: CTGGCAGCGCGCGGCTTCTCAGAGCTGAGCACCCTG...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCCAAGGGCCCCATGGCTaGCACAGGCACTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAQGPHG*HRHCSF
Trigger: GAAGGAGCAGTGCCTGTGTCAGCCATGGGGCCCTTG...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCGCGTCACCCAGTTCATaGCACCCCAGGGACAGCCTG +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAASPSS*HPRDSL
Trigger: CAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGC...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGCAGGTGACCCGTGGGTaGAATGGTGCGGATGATGGC +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGQVTRG*NGADDG
Trigger: GCCATCATCCGCACCATTGCACCCACGGGTCACCTG...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGGGCACACGTCCTGGGTaGGCACAGTCACCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEGTRPG*AQSPSG
Trigger: GCCGCTGGGTGACTGTGCGCACCCAGGACGTGTGCC...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGGCAGACAACCCACTCTaGCGCTCCTCTCCGCAGCGC +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRADNPL*RSSPQR
Trigger: GCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGC...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCACAGCCCCGACACACTTaGCTGGTTGCCTGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPQPRHT*LVACGR
Trigger: TCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTG...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGCCAGCCTGGGCGTCCTaGCCTCTGTCCCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILPAWAS*PLSPLW
Trigger: CCAAAGTGGGGACAGAGGGCAGGACGCCCAGGCTGG...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTTGCCGCAGGACACCATaGCGGGTCTGGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSACRRTP*RVWVCA
Trigger: GGCACAGACCCAGACCCGGCATGGTGTCCTGCGGCA...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGCTGCGGCACACGTCCTaGGTGCGCACAGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRLRHTS*VRTVTQ
Trigger: CTGGGTGACTGTGCGCACCCAGGACGTGTGCCGCAG...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCAGCCTGGGGTCTTGGTaGCGAAGGTCAGGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDASLGSW*RRSGSR
Trigger: CCGGCTACCTGACCTTCGCCACCAAGACCCCAGGCT...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACTGGTCTCAGGCCCCGTaGGGCAGCCAGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDWSQAP*GSQGRG
Trigger: CCCACGGCCCTGGCTGCCCCACGGGGCCTGAGACCA...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGGCTTCTGGCCAAGGCTaGAGCCTCGGCCCGGGGACT +
Preference number: 4 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVASGQG*SLGPGT
Trigger: AGTCCCCGGGCCGAGGCTCCAGCCTTGGCCAGAAGC...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGGTTCCTGGGCTGGCCTaGTCTCCTAGCGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRVPGLA*SPSAGE
Trigger: CTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGGAGTGGACGAAGGCCTaGGCTGAGCTCAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGEWTKA*AELSAV
Trigger: CACAGCACTGAGCTCAGCCCAGGCCTTCGTCCACTC...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGTCCACCGTGTGCAGGTaGCCCGTGGGTGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILSTVCR*PVGAMV
Trigger: CACCATTGCACCCACGGGTCACCTGCACACGGTGGA...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGTCCACCGTGTGCAGGTaGCCCGTGGGTGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRSTVCR*PVGAMV
Trigger: CACCATTGCACCCACGGGTCACCTGCACACGGTGGA...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGCTGCTCGATGCACGGTaGGAAGGAGCAGAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILLLDAR*EGAEAP
Trigger: GGGCGCTTCTGCTCCTTCTCACCGTGCATCGAGCAG...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCACTGAGCTCAGTGCTGTaGCATCAGCCAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPLSSVL*HQPGGQ
Trigger: CTGGCCTCCTGGCTGATGTCACAGCACTGAGCTCAG...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCATGCCCTTGGCTTCTGTaGGGGGTAGGGGTACCCACA +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPCPWLL*GVGVPT
Trigger: TGTGGGTACCCCTACCCCTCACAGAAGCCAAGGGCA...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGACCCCAGGGACAGCCTaGCCCCAAAGCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRTPGTA*PQSSWH
Trigger: ATGCCAGGAGCTTTGGGGTCAGGCTGTCCCTGGGGT...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTGCGTCACCCAGTTCATaGCACCCCAGGGACAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAASPSS*HPRDSL
Trigger: CAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGC...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGATGTGCGGACCCTGGTaGCTCACCCAGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVMCGPW*LTQGCH
Trigger: GTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACAT...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGCTCCCGGGCCTTCTCTaGCCGCTGCTGGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGELPGLL*PLLVEL
Trigger: GAGTTCCACCAGCAGCGGGCAGAGAAGGCCCGGGAG...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACCGGCAGGGCCATCTGTaGCTGTGCCCAGGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDRQGHL*LCPGRA
Trigger: CGCCCGACCTGGGCACAGGCACAGATGGCCCTGCCG...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTCAGCCCCGACACACTTaGCTGGTTGCCTGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAQPRHT*LVACGR
Trigger: TCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTG...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGCACCATGCAGGCCTTTaGTGTGGCCAGGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILHHAGL*CGQEGQ
Trigger: CTGCCCCTCCTGGCCACAGCAAAGGCCTGCATGGTG...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTGTGCGGATGATGGCGTaGGACACAGAGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAVRMMA*DTEPLP
Trigger: CGGCAGTGGCTCTGTGTCCCACGCCATCATCCGCAC...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGTCTGCCCGCTGCTGGTaGAACTCCACCGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRSARCW*NSTVCR
Trigger: CCTGCACACGGTGGAGTTCCACCAGCAGCGGGCAGA...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGCACGTTGTAGACCTGTaGCAGCACCTCCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGHVVDL*QHLQGA
Trigger: AGCACCCTGGAGGTGCTGCCACAGGTCTACAACGTG...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAAAACAGCAGCTGGGATaGGCCACAGGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPKQQLG*ATGLDR
Trigger: CCTGTCCAGCCCTGTGGCCCATCCCAGCTGCTGTTT...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGCTGCTTAGGCCCACCTaGGAGGGGGTCAGACTCCCC +
Preference number: 4 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVLLRPT*EGVRLP
Trigger: GGGGAGTCTGACCCCCTCCCAGGTGGGCCTAAGCAG...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTTGGTCTCAGGCCCCGTaGGGCAGCCAGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCWSQAP*GSQGRG
Trigger: CCCACGGCCCTGGCTGCCCCACGGGGCCTGAGACCA...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGCCGGGACTCACAGGCTaGCATTCACACCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVPGLTG*HSHPSP
Trigger: GGGGCTGGGGTGTGAATGCCAGCCTGTGAGTCCCGG...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCGGCACTGTCCCTGGGTaGTGTCCTGAATGCACCTCC +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAGTVPG*CPECTS
Trigger: GGAGGTGCATTCAGGACACCACCCAGGGACAGTGCC...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGGCTCCCAACAGCCACTaGCTGCCTGGGCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRAPNSH*LPGQKP
Trigger: GGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGC...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTGACAGCAGCTGGGGGTaGCCTTGGCTGCTAGGGATC +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSADSSWG*PWLLGI
Trigger: GATCCCTAGCAGCCAAGGCCACCCCCAGCTGCTGTC...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGGACAGCAGCTGGGGGTaGCCTTGGCTGCTAGGGATC +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILDSSWG*PWLLGI
Trigger: GATCCCTAGCAGCCAAGGCCACCCCCAGCTGCTGTC...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTGGCCTAGACAGCAGCTaGGGGTGGCCTTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAGLDSS*GWPWLL
Trigger: TAGCAGCCAAGGCCACCCCCAGCTGCTGTCTAGGCC...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAGCAACCAGCCCCGGCTaGAAAATGGGCACAACCTGG +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPATSPG*KMGTTW
Trigger: CCAGGTTGTGCCCATTTTCCAGCCGGGGCTGGTTGC...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGGCCATACGGTGGGGGTaGATGCCTGGAGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILAIRWG*MPGGSR
Trigger: CCTTGAGCCTCCAGGCATCCACCCCCACCGTATGGC...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGACACCATGCCGGGTCTaGGTCTGTGCCCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVTPCRV*VCAPRC
Trigger: GCAGCGTGGGGCACAGACCCAGACCCGGCATGGTGT...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR TCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTCCCAGGCAGCCACACTaGATTCCAGCCCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAPRQPH*IPAQDC
Trigger: ACAGTCCTGGGCTGGAATTCAGTGTGGCTGCCTGGG...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGCAGGGCCGAGGGGATTaGCACAGCAACTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRQGRGD*HSNSVP
Trigger: TGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTG...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAGCCGATAAGGTCAACTaGGTGCCGCAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPADKVN*VPQDTM
Trigger: CATGGTGTCCTGCGGCACTCAGTTGACCTTATCGGC...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGGCCTTCTCTGCCCGCTaGTGGTGGAACTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEAFSAR*WWNSTV
Trigger: CACGGTGGAGTTCCACCAGCAGCGGGCAGAGAAGGC...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGGTTGCACCTGCTCGATaGACGGTGAGAAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGVAPAR*TVRRSR
Trigger: TCTGCTCCTTCTCACCGTGCATCGAGCAGGTGCAAC...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACTCCCAGCTCCCTGGTaGCCTGGGAGGCGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSLPAPW*PGRRPP
Trigger: AGGGGGCCGCCTCCCAGGGCACCAGGGAGCTGGGAG...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTCTCCCAGCTCCCTGGTaGCCTGGGAGGCGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTLPAPW*PGRRPP
Trigger: AGGGGGCCGCCTCCCAGGGCACCAGGGAGCTGGGAG...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGGGGTGGTGTCCTGAATaGACCTCCCCTACCCCACAC +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRGWCPE*TSPTPH
Trigger: GTGTGGGGTAGGGGAGGTGCATTCAGGACACCACCC...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCCGCGCTGCCAGCGCCTaGCATGTGCGTTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPRAASA*HVRCTC
Trigger: GCAGGTGCAACGCACATGCCAGGCGCTGGCAGCGCG...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGCCTAGCCTGGGGTCTTaGTGGCGAAGGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRPSLGS*WRRSGS
Trigger: GCTACCTGACCTTCGCCACCAAGACCCCAGGCTAGG...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGGCAGGGCAGGGATTCTaGGTCAGCTCACCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRAGQGF*VSSPQL
Trigger: AAGCTGGGGTGAGCTGACCCAGAATCCCTGCCCTGC...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACCAGCCACTGGCTGCCTaGGCAGAAACCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDQPLAA*AETQAP
Trigger: GGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTG...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGCTCATCACTCACACTTaGGGCCAGGCCCCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILLITHT*GQAPAS
Trigger: GCTAGCAGGGGCCTGGCCCCAAGTGTGAGTGATGAG...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CAA 72 bp TGGCATTCACACCCCAGCCCCGACACACTTGCCTGGTaGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: WHSHPSPDTLAW*PAADNPLCRSS
Trigger: AGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGGGGTGTGAATGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CAA 72 bp TCACAGGCTGGCATTCACACCCCAGCCCCGACACACTaGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SQAGIHTPAPTH*PGCLRQTTHSA
Trigger: GGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGGGGTGTGAATGCCAGCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCACAACTCTGTCCCATGTaGCAACTAAGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPQLCPM*QLRVGW
Trigger: CCAGCCCACCCTTAGTTGTCACATGGGACAGAGTTG...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACGCTGAGGGAGTGGGGTaGGGCCCAGCTGGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDAEGVG*GPAGSR
Trigger: TCTAGACCCAGCTGGGCCTCACCCCACTCCCTCAGC...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCCGTGAGGATCCAAGCTaGGGGAGTGGGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPREDPS*GSGVRP
Trigger: GGGCCTCACCCCACTCCCTCAGCTTGGATCCTCACG...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACTGCGACGCTCCTGCTaGCGGGGCTCCACACGTGCC +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSLRRSC*RGSTRA
Trigger: GGCACGTGTGGAGCCCCGGCAGCAGGAGCGTCGCAG...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTGGCACACGTCCTGGGTaGGCACAGTCACCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCGTRPG*AQSPSG
Trigger: GCCGCTGGGTGACTGTGCGCACCCAGGACGTGTGCC...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTGCTGACCATATAAGGTaGCTCTGGCCTCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAADHIR*LWPPCP
Trigger: TGGGCAGGGAGGCCAGAGGCACCTTATATGGTCAGC...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCCCTGGCCTCAGCGAGTaGAGCCCATGTCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPPGLSE*SPCQGL
Trigger: GAGCCCCTGACATGGGCTGCACTCGCTGAGGCCAGG...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACTCCTCTCCGCAGCGCTaGCTGGCCTCAGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDSSPQR*LASASA
Trigger: TGCACTCGCTGAGGCCAGGCAGCGCTGCGGAGAGGA...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGACCTGGACCCTACGGTaGCTGAGGCCTATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILTWTLR*LRPMCP
Trigger: AGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCATAAGGTCAACTGAGTaGCGCAGGACACCATGCCGG +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAIRSTE*RRTPCR
Trigger: CCGGCATGGTGTCCTGCGGCACTCAGTTGACCTTAT...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCACGGCGTCGGCCACGTaGCTCACGCCAAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPTASAT*LTPKPL
Trigger: CAGTGGCTTTGGCGTGAGCCACGTGGCCGACGCCGT...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTCACGTTGTAGACCTGTaGCAGCACCTCCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAHVVDL*QHLQGA
Trigger: AGCACCCTGGAGGTGCTGCCACAGGTCTACAACGTG...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGCCCACCGTCTGTGTCTaGCAGGCATCGCTGACCATA +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRPTVCV*QASLTI
Trigger: TATGGTCAGCGATGCCTGCCAGACACAGACGGTGGG...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGCCCACCTGCACCCTTTaGCTTCAACACCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEPTCTL*LQHPGE
Trigger: CTCCCCTGGGTGTTGAAGCCAAAGGGTGCAGGTGGG...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGGAGTGGACGAAGGCCTaGGCTGAGCTCAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEEWTKA*AELSAV
Trigger: CACAGCACTGAGCTCAGCCCAGGCCTTCGTCCACTC...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGCCCGACACACTTGCCTaGTTGCCTGCGGCAGACAAC +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEPDTLA*LPAADN
Trigger: GTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGG...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGCTCATCACTCACACTTaGGGCCAGGCCCCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVLITHT*GQAPAS
Trigger: GCTAGCAGGGGCCTGGCCCCAAGTGTGAGTGATGAG...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGGCAGCCAGATGGGGGTaGCCACACATTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILAARWG*PHICPF
Trigger: AAAGGGGCAAATGTGTGGCCACCCCCATCTGGCTGC...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTCCAGGCGGCCTGGAGTaGACCCTTCCTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCPGGLE*TLPSGA
Trigger: CGCCCCTGAAGGAAGGGTCCACTCCAGGCCGCCTGG...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTAGGGAAGCTGGGTCCTaGAAGGAGAGGACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAREAGS*KERTSP
Trigger: AGGGCTTGTCCTCTCCTTCCAGGACCCAGCTTCCCT...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACCACGGCCTCCCAGGGTaGTGGGATGTCCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDHGLPG*WDVQED
Trigger: GTCTTCCTGGACATCCCATCACCCTGGGAGGCCGTG...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGTCTGGCAGGCATCGCTaGCCATATAAGGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILSGRHR*PYKVPL
Trigger: CAGAGGCACCTTATATGGTCAGCGATGCCTGCCAGA...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTCAACTCTGTCCCATGTaGCAACTAAGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAQLCPM*QLRVGW
Trigger: CCAGCCCACCCTTAGTTGTCACATGGGACAGAGTTG...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCTCACGCCAAAGCCACTaGGGCACACGTCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPSRQSH*GTRPGC
Trigger: GCACCCAGGACGTGTGCCGCAGTGGCTTTGGCGTGA...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAGGCCATCTGTGCCTGTaGCCAGGTCGGGCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSGHLCL*PGRAVA
Trigger: TGCCACCGCCCGACCTGGGCACAGGCACAGATGGCC...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTTCATGGGCGTGCCGCTaGGGAAGGGGCTGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTSWACR*GRGWCR
Trigger: CCGACACCAGCCCCTTCCGCAGCGGCACGCCCATGA...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACCTCCTTCATGGGCGTaGCGCTGCGGAAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSPPSWA*RCGRGW
Trigger: CCAGCCCCTTCCGCAGCGGCACGCCCATGAAGGAGG...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTCCTCCTTCATGGGCGTaGCGCTGCGGAAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTPPSWA*RCGRGW
Trigger: CCAGCCCCTTCCGCAGCGGCACGCCCATGAAGGAGG...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGTCAGACTCCCCCACCTaGACCCTTTGGCTTCAACAC +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRSDSPT*TLWLQH
Trigger: GTGTTGAAGCCAAAGGGTGCAGGTGGGGGAGTCTGA...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTCCTGGCCTCAGCGAGTaGAGCCCATGTCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCPGLSE*SPCQGL
Trigger: GAGCCCCTGACATGGGCTGCACTCGCTGAGGCCAGG...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGTACGGTGGGGGTGGATaGCTGGAGGCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEYGGGG*LEAQGH
Trigger: ATGACCTTGAGCCTCCAGGCATCCACCCCCACCGTA...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCGATCAGCTCCTCGTATaGCACGAAGCTCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDADQLLV*HEAHGA
Trigger: AGCACCATGAGCTTCGTGGCATACGAGGAGCTGATC...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR GCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCAGCTCGGGCGTGGGGTaGAGCACATACACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPSSGVG*STYTQP
Trigger: TGGCTGGGTGTATGTGCTGCACCCCACGCCCGAGCT...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR GCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACAGGATCTGCGTGCGGTaGGGCAGGTTCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDRICVR*GRFSVQ
Trigger: CTGGACGCTGAACCTGCCGCACCGCACGCAGATCCT...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCGCGCTGCCAGCGCCTaGCATGTGCGTTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAARAASA*HVRCTC
Trigger: GCAGGTGCAACGCACATGCCAGGCGCTGGCAGCGCG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGGGCGGCCCCCTAGCCTaGGGTCTTGGTGGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAGGPLA*GLGGEG
Trigger: ACCTTCGCCACCAAGACCCCAGGCTAGGGGGCCGCC...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACGGGTCAGACGCAGCGTaGTCTCAGGGTCAATGCCCC +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDGSDAA*SQGQCP
Trigger: GGGGCATTGACCCTGAGACCACGCTGCGTCTGACCC...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCTGGAGAAGCACGAGATaGTCTCAGGCCCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPWRSTR*SQAPWG
Trigger: GCCCCACGGGGCCTGAGACCATCTCGTGCTTCTCCA...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACCCTCGGCCCGGGGACTaGAGAAGCACGAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDPRPGD*RSTRWS
Trigger: AGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGG...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGGCTTCTGGCCAAGGCTaGAGCCTCGGCCCGGGGACT +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAASGQG*SLGPGT
Trigger: AGTCCCCGGGCCGAGGCTCCAGCCTTGGCCAGAAGC...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGCCTCTTGGACATGAGTaGACGAAGGCCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVPLGHE*TKAWAE
Trigger: CTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGG...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACCAGGCGGCCTGGAGTaGACCCTTCCTTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSPGGLE*TLPSGA
Trigger: CGCCCCTGAAGGAAGGGTCCACTCCAGGCCGCCTGG...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACTCCAGAGCTCGGGCGTaGGGTGCAGCACATACACCC +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDSRARA*GAAHTP
Trigger: GGGTGTATGTGCTGCACCCCACGCCCGAGCTCTGGA...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR TCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTCTGCTCGATGCACGGTaGGAAGGAGCAGAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCLLDAR*EGAEAP
Trigger: GGGCGCTTCTGCTCCTTCTCACCGTGCATCGAGCAG...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCCAGGGTGCTCAGCTCTaGGAAGCCGCGCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSQGAQL*EAARCQ
Trigger: CTGGCAGCGCGCGGCTTCTCAGAGCTGAGCACCCTG...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTCTGGACAGGAATGGCTaGGGCCCAGCCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTLDRNG*GPAPAL
Trigger: CAGTGCTGGGGCTGGGCCTCAGCCATTCCTGTCCAG...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACGACGAAGGCCTGGGCTaGGCTCAGTGCTGTGACATC +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDDEGLG*AQCCDI
Trigger: GATGTCACAGCACTGAGCTCAGCCCAGGCCTTCGTC...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCGCACTGCTCCTTCCTTaGGGCTGTCAGACACCAGGG +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPALLLP*GCQTPG
Trigger: CCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGC...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTCCCTCGGAGCAGGGCTaGGCAACTCTCAGGGACACA +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCPSEQG*ATLRDT
Trigger: TGTGTCCCTGAGAGTTGCTCAGCCCTGCTCCGAGGG...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAATGTGCGGACCCTGGTaGCTCACCCAGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSMCGPW*LTQGCH
Trigger: GTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACAT...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACTCCCGGGCCTTCTCTaGCCGCTGCTGGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSLPGLL*PLLVEL
Trigger: GAGTTCCACCAGCAGCGGGCAGAGAAGGCCCGGGAG...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTTCACGCCAAAGCCACTaGGGCACACGTCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCSRQSH*GTRPGC
Trigger: GCACCCAGGACGTGTGCCGCAGTGGCTTTGGCGTGA...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACGCCTGGCATGTGCGTTaGACCTGCTCGATGCACGGT +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDAWHVR*TCSMHG
Trigger: ACCGTGCATCGAGCAGGTGCAACGCACATGCCAGGC...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTCCAGCGCCTGGCATGTaGGTTGCACCTGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCPAPGM*VAPARC
Trigger: GCATCGAGCAGGTGCAACGCACATGCCAGGCGCTGG...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACCTCCACCCCCTTCCTaGTTAGGCCCACCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSPPPPS*LGPPGR
Trigger: CCTCCCAGGTGGGCCTAAGCAGGAAGGGGGTGGAGG...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCGGGACACAGAGCCACTaGCGGTGCCAGACTCACAGA +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPGTQSH*RCQTHR
Trigger: TCTGTGAGTCTGGCACCGGCAGTGGCTCTGTGTCCC...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACCCACACGGTGCTCCTaGAACTCCTCCCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSPTRCS*NSSRAF
Trigger: GAAGGCCCGGGAGGAGTTCCAGGAGCACCGTGTGGG...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCTGCGGCACACGTCCTaGGTGCGCACAGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAALRHTS*VRTVTQ
Trigger: CTGGGTGACTGTGCGCACCCAGGACGTGTGCCGCAG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACGCAACAAACAGCAGCTaGGATGGGCCACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDATNSS*DGPQGW
Trigger: CCAGCCCTGTGGCCCATCCCAGCTGCTGTTTGTTGC...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACTGCTTAGGCCCACCTaGGAGGGGGTCAGACTCCCC +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSLLRPT*EGVRLP
Trigger: GGGGAGTCTGACCCCCTCCCAGGTGGGCCTAAGCAG...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAGTTCCTGGGCTGGCCTaGTCTCCTAGCGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSVPGLA*SPSAGE
Trigger: CTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCGGCACTGTCCCTGGGTaGTGTCCTGAATGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPGTVPG*CPECTS
Trigger: GGAGGTGCATTCAGGACACCACCCAGGGACAGTGCC...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTGCTCCCAACAGCCACTaGCTGCCTGGGCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCAPNSH*LPGQKP
Trigger: GGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGC...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGAACCCCAGGAAGGAGTaGCCTTTTCTGCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: VPGLAWSPSAGESRAGILNPRKE*PFLQPD
Trigger: ATCTGGCTGCAGAAAAGGCCACTCCTTCCTGGGGTT...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACGCCCCGGCTGGAAAATaGGCACAACCTGGACCCTAC +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDAPAGK*AQPGPY
Trigger: GTAGGGTCCAGGTTGTGCCCATTTTCCAGCCGGGGC...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCGCAACCAGCCCCGGCTaGAAAATGGGCACAACCTGG +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPATSPG*KMGTTW
Trigger: CCAGGTTGTGCCCATTTTCCAGCCGGGGCTGGTTGC...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGCATGGTGCTAATGTCTaGCAAGGGCCAAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEHGANV*QGPRTC
Trigger: GCAGGTCCTTGGCCCTTGCCAGACATTAGCACCATG...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCGCCACCATTGCACCATaGCCCAGTGACAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPATIAP*PSDRMA
Trigger: GGCCATCCTGTCACTGGGCCATGGTGCAATGGTGGC...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR TCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCGGGCGGTGGCAGGCTaGCAGTGCGCACGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGRAVAG*QCARCR
Trigger: TCTACAACGTGCGCACTGTCAGCCTGCCACCGCCCG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTTGCCCTTGGCTTCTGTaGGGGGTAGGGGTACCCACA +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCCPWLL*GVGVPT
Trigger: TGTGGGTACCCCTACCCCTCACAGAAGCCAAGGGCA...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAACCCCAGGGACAGCCTaGCCCCAAAGCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSTPGTA*PQSSWH
Trigger: ATGCCAGGAGCTTTGGGGTCAGGCTGTCCCTGGGGT...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTGCCTTCTCTGCCCGCTaGTGGTGGAACTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTAFSAR*WWNSTV
Trigger: CACGGTGGAGTTCCACCAGCAGCGGGCAGAGAAGGC...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCAGCGGCCCACACGGTaGTCCTGGAACTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHQRPTR*SWNSSR
Trigger: CCGGGAGGAGTTCCAGGAGCACCGTGTGGGCCGCTG...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCCAGCGCCTGGCATGTaGGTTGCACCTGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAPAPGM*VAPARC
Trigger: GCATCGAGCAGGTGCAACGCACATGCCAGGCGCTGG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATTCATGGGCGTGCCGCTaGGGAAGGGGCTGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHSWACR*GRGWCR
Trigger: CCGACACCAGCCCCTTCCGCAGCGGCACGCCCATGA...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCCTCTGGCCTCCCTaGCCAGCCCTTCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSCLWPP*PALQCS
Trigger: GGAGCACTGAAGGGCTGGGCAGGGAGGCCAGAGGCA...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTCCTCTCCGCAGCGCTaGCTGGCCTCAGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSSSPQR*LASASA
Trigger: TGCACTCGCTGAGGCCAGGCAGCGCTGCGGAGAGGA...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACACACACTTGCCTGGTTaGCTGCGGCAGACAACCCAC +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDTHLPG*LRQTTH
Trigger: GTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGT...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCCAGCCTGGGCGTCCTaGCCTCTGTCCCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGPAWAS*PLSPLW
Trigger: CCAAAGTGGGGACAGAGGGCAGGACGCCCAGGCTGG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACCTGGAGCGCCTATCATaGCAAACCAGGACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDLERLS*QTRTGR
Trigger: CCTCCCTGTCCTGGTTTGGCATGATAGGCGCTCCAG...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATGACCTGCGACGCTCCTaGTGCCGGGGCTCCACACGT +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHDLRRS*CRGSTR
Trigger: ACGTGTGGAGCCCCGGCAGCAGGAGCGTCGCAGGTC...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR GCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAGTCTGTGCCCCACGCTaGACACGCACCGCCACCATT +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSVCAPR*TRTATI
Trigger: AATGGTGGCGGTGCGTGTGCAGCGTGGGGCACAGAC...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTTCTGCCCGCTGCTGGTaGAACTCCACCGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTSARCW*NSTVCR
Trigger: CCTGCACACGGTGGAGTTCCACCAGCAGCGGGCAGA...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTTTCTCTGCCCGCTGCTaGTGGAACTCCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCFSARC*WNSTVC
Trigger: GCACACGGTGGAGTTCCACCAGCAGCGGGCAGAGAA...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTAAACAGCAGCTGGGATaGGCCACAGGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCKQQLG*ATGLDR
Trigger: CCTGTCCAGCCCTGTGGCCCATCCCAGCTGCTGTTT...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTACCCAGGGGAGCCTGTaGCAGTGGATACTTCATATT +
Preference number: 4 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSATQGSL*QWILHI
Trigger: AATATGAAGTATCCACTGCCACAGGCTCCCCTGGGT...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTGGGTCAGACGCAGCGTaGTCTCAGGGTCAATGCCCC +
Preference number: 4 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTGSDAA*SQGQCP
Trigger: GGGGCATTGACCCTGAGACCACGCTGCGTCTGACCC...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGTTTTCTGCAGCCAGATaGGGGTGGCCACACATTTGC +
Preference number: 4 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVFSAAR*GWPHIC
Trigger: GCAAATGTGTGGCCACCCCCATCTGGCTGCAGAAAA...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTGGCTCAAGGTCATCATaGGGGCCTGTGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCGSRSS*GPVCRA
Trigger: TGCCCTGCACACAGGCCCCCATGATGACCTTGAGCC...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAGCCATACGGTGGGGGTaGATGCCTGGAGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSAIRWG*MPGGSR
Trigger: CCTTGAGCCTCCAGGCATCCACCCCCACCGTATGGC...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CAA 72 bp CTGCAGCCAGATGGGGGTGGCCACACATTTGCCCCTTaGTCCTGGAGACTGGAGCGCCTATCATGCCAAACC +
Preference number: 4 (lower is better)
Translates to: LQPDGGGHTFAP*SWRLERLSCQT
Trigger: GGTTTGGCATGATAGGCGCTCCAGTCTCCAGGACAAAGGGGCAAATGTGTGGCCACCCCCATCTGGCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCTGAGCTCAGTGCTGTaGCATCAGCCAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAALSSVL*HQPGGQ
Trigger: CTGGCCTCCTGGCTGATGTCACAGCACTGAGCTCAG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAGACGAAGGCCTGGGCTaGGCTCAGTGCTGTGACATC +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSDEGLG*AQCCDI
Trigger: GATGTCACAGCACTGAGCTCAGCCCAGGCCTTCGTC...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCCCGCCTCTTGGACATaGGTGGACGAAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHPASWT*VDEGLG
Trigger: GCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGG...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCCCTCTGTGCCCCAGGTaGGTAACAAGGTTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPPLCPR*VTRLEG
Trigger: CCCTTCTAACCTTGTTACTCACCTGGGGCACAGAGG...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCAGGGCCGAGGGGATTaGCACAGCAACTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAQGRGD*HSNSVP
Trigger: TGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGGCTGAGGGAGTGGGGTaGGGCCCAGCTGGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILAEGVG*GPAGSR
Trigger: TCTAGACCCAGCTGGGCCTCACCCCACTCCCTCAGC...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTTGCACCATGGCCCAGTaGCAGGATGGCCGTGTCACC +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGCTMAQ*QDGRVT
Trigger: GGTGACACGGCCATCCTGTCACTGGGCCATGGTGCA...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR GCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGGCCTGGCATGTGCGTTaGACCTGCTCGATGCACGGT +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAAWHVR*TCSMHG
Trigger: ACCGTGCATCGAGCAGGTGCAACGCACATGCCAGGC...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCCACCATGCAGGCCTTTaGTGTGGCCAGGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSHHAGL*CGQEGQ
Trigger: CTGCCCCTCCTGGCCACAGCAAAGGCCTGCATGGTG...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGCCCACACGGTGCTCCTaGAACTCCTCCCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILPTRCS*NSSRAF
Trigger: GAAGGCCCGGGAGGAGTTCCAGGAGCACCGTGTGGG...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGGAGAAGCACGAGATaGTCTCAGGCCCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSWRSTR*SQAPWG
Trigger: GCCCCACGGGGCCTGAGACCATCTCGTGCTTCTCCA...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCCTCGGCCCGGGGACTaGAGAAGCACGAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGPRPGD*RSTRWS
Trigger: AGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATGCTCACCCCAGCTTCTaGCCAAGGCTGGAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHAHPSF*PRLEPR
Trigger: CCGAGGCTCCAGCCTTGGCCAGAAGCTGGGGTGAGC...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCCGGGACTCACAGGCTaGCATTCACACCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHPGLTG*HSHPSP
Trigger: GGGGCTGGGGTGTGAATGCCAGCCTGTGAGTCCCGG...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCATCCAGCCCAGGACTGTaGAAGAAGGCCCAGCACTCC +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSSSPGL*KKAQHS
Trigger: GGAGTGCTGGGCCTTCTTCCACAGTCCTGGGCTGGA...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTCAACTAAGGGTGGGCTaGGACCTCCCGCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTQLRVG*DLPLSM
Trigger: CATGGAGAGCGGGAGGTCCCAGCCCACCCTTAGTTG...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTTCTGGCAGGCATCGCTaGCCATATAAGGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCSGRHR*PYKVPL
Trigger: CAGAGGCACCTTATATGGTCAGCGATGCCTGCCAGA...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGTTAGCCTTTAAGAGGTaGTCACATAGGCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVLAFKR*SHRHCP
Trigger: GGGACAGTGCCTATGTGATCACCTCTTAAAGGCTAA...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTGCACTGCTCCTTCCTTaGGGCTGTCAGACACCAGGG +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGALLLP*GCQTPG
Trigger: CCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGC...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGCAAGGGCCCCATGGCTaGCACAGGCACTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILQGPHG*HRHCSF
Trigger: GAAGGAGCAGTGCCTGTGTCAGCCATGGGGCCCTTG...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTCCTCTGTGCCCCAGGTaGGTAACAAGGTTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCPLCPR*VTRLEG
Trigger: CCCTTCTAACCTTGTTACTCACCTGGGGCACAGAGG...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATTGGCTCCAGGCCACGTaGGGATCCAAGCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHWLQAT*GSKLRE
Trigger: CTCCCTCAGCTTGGATCCTCACGTGGCCTGGAGCCA...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGTGGCTCCAGGCCACGTaGGGATCCAAGCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILWLQAT*GSKLRE
Trigger: CTCCCTCAGCTTGGATCCTCACGTGGCCTGGAGCCA...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCCGTGTCACCCTCCTTaGTCAGCTCCTCGTATGCCA +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAPCHPP*SAPRMP
Trigger: TGGCATACGAGGAGCTGATCAAGGAGGGTGACACGG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR GCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCTGGAGCGCCTATCATaGCAAACCAGGACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAALERLS*QTRTGR
Trigger: CCTCCCTGTCCTGGTTTGGCATGATAGGCGCTCCAG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp ACAGAGGCTCCCAACAGCCACTGGCTGCCTGGGCAGAAACCCAGGCCCCCTAGGTATAAACCATGGAGCTaGGCCTCAAAGAAACACCTC +
Preference number: 4 (lower is better)
Translates to: TEAPNSHWLPGQKPRPPRYKPWS*ASKKHL
Trigger: GAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATA...CCTAGGGGGCCTGGGTTTCTGCCCAGGCAGCCAGTGGCTGTTGGGAGCCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGACCTGGACCCTACGGTaGCTGAGGCCTATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAATWTLR*LRPMCP
Trigger: AGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGGTGCGGATGATGGCGTaGGACACAGAGCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILVRMMA*DTEPLP
Trigger: CGGCAGTGGCTCTGTGTCCCACGCCATCATCCGCAC...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGAGCCTGGGGTCTTGGTaGCGAAGGTCAGGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILSLGSW*RRSGSR
Trigger: CCGGCTACCTGACCTTCGCCACCAAGACCCCAGGCT...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCCCTAGCCTGGGGTCTTaGTGGCGAAGGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSPSLGS*WRRSGS
Trigger: GCTACCTGACCTTCGCCACCAAGACCCCAGGCTAGG...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACCCACCGTCTGTGTCTaGCAGGCATCGCTGACCATA +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSPTVCV*QASLTI
Trigger: TATGGTCAGCGATGCCTGCCAGACACAGACGGTGGG...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCGCAACAAACAGCAGCTaGGATGGGCCACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSATNSS*DGPQGW
Trigger: CCAGCCCTGTGGCCCATCCCAGCTGCTGTTTGTTGC...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCCCACCTGCACCCTTTaGCTTCAACACCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGPTCTL*LQHPGE
Trigger: CTCCCCTGGGTGTTGAAGCCAAAGGGTGCAGGTGGG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTGCAGGGCAGGGATTCTaGGTCAGCTCACCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGAGQGF*VSSPQL
Trigger: AAGCTGGGGTGAGCTGACCCAGAATCCCTGCCCTGC...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGCCTCTTGGACATGAGTaGACGAAGGCCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAPLGHE*TKAWAE
Trigger: CTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGG...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCCCGACACACTTGCCTaGTTGCCTGCGGCAGACAAC +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGPDTLA*LPAADN
Trigger: GTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTCGGG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTACACCGTTGTCACTGTaGAGGGACCTCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTTPLSL*RDLLHA
Trigger: GGCATGGAGGAGGTCCCTCCACAGTGACAACGGTGT...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGGGCCTAGACAGCAGCTaGGGGTGGCCTTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILGLDSS*GWPWLL
Trigger: TAGCAGCCAAGGCCACCCCCAGCTGCTGTCTAGGCC...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCTTTGCCCCTTTGTCCTaGAGACTGGAGCGCCTATCA +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPFAPLS*RLERLS
Trigger: TGATAGGCGCTCCAGTCTCCAGGACAAAGGGGCAAA...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGGCAGCCAGATGGGGGTaGCCACACATTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAAARWG*PHICPF
Trigger: AAAGGGGCAAATGTGTGGCCACCCCCATCTGGCTGC...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAAGGGAAGCTGGGTCCTaGAAGGAGAGGACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSREAGS*KERTSP
Trigger: AGGGCTTGTCCTCTCCTTCCAGGACCCAGCTTCCCT...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCCATGTTGAACCTGACTaGGGGCCCCTCCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSHVEPD*GPLLCA
Trigger: GGCACAGAGGAGGGGCCCCCAGTCAGGTTCAACATG...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCCAACTAAGGGTGGGCTaGGACCTCCCGCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSQLRVG*DLPLSM
Trigger: CATGGAGAGCGGGAGGTCCCAGCCCACCCTTAGTTG...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTGGCTCAAGGTCATCATaGGGGCCTGTGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGGSRSS*GPVCRA
Trigger: TGCCCTGCACACAGGCCCCCATGATGACCTTGAGCC...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
3UTR CAA 72 bp ACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATaGGCAACAAACAGCAGCTGGGATGGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: TPRGACGSGYFI*ATNSSWDGPQG
Trigger: GCCCTGTGGCCCATCCCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATGTGCAATGGTGCGGATaGTGGCGTGGGACACAGAGC +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHVQWCG*WRGTQS
Trigger: GCTCTGTGTCCCACGCCATCATCCGCACCATTGCAC...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGGTGCAATGGTGCGGATaGTGGCGTGGGACACAGAGC +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILVQWCG*WRGTQS
Trigger: GCTCTGTGTCCCACGCCATCATCCGCACCATTGCAC...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCCCAGGCAGCCACACTaGATTCCAGCCCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHPRQPH*IPAQDC
Trigger: ACAGTCCTGGGCTGGAATTCAGTGTGGCTGCCTGGG...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp ACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTGCGGTTGCACCTGCTCGATaGACGGTGAGAAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: TWTLRCLRPMCPINHGAAVAPAR*TVRRSR
Trigger: TCTGCTCCTTCTCACCGTGCATCGAGCAGGTGCAAC...CGCAGCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATAGTAGAGGATCTGCGTaGGGTGCGGCAGGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHSRGSA*GAAGSA
Trigger: CGCTGAACCTGCCGCACCGCACGCAGATCCTCTACT...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CCA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCCTTTGTCCTGGAGACTaGAGCGCCTATCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPLCPGD*SAYHAK
Trigger: TTTGGCATGATAGGCGCTCCAGTCTCCAGGACAAAG...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATCATGTTGAACCTGACTaGGGGCCCCTCCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHHVEPD*GPLLCA
Trigger: GGCACAGAGGAGGGGCCCCCAGTCAGGTTCAACATG...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGGTGTCCTATAAACCATaGAGCTGCGCCTCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEVSYKP*SCASKK
Trigger: TTTCTTTGAGGCGCAGCTCCATGGTTTATAGGACAC...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAAATGGGCACAACCTaGACCCTACGGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTKMGTT*TLRCLR
Trigger: CCTCAGGCACCGTAGGGTCCAGGTTGTGCCCATTTT...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGGCCCCGGCTGGAAAATaGGCACAACCTGGACCCTAC +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILAPAGK*AQPGPY
Trigger: GTAGGGTCCAGGTTGTGCCCATTTTCCAGCCGGGGC...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCCATGTGCGTTGCACCTaGTCGATGCACGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSHVRCT*SMHGEK
Trigger: CTTCTCACCGTGCATCGAGCAGGTGCAACGCACATG...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTCATGTGCGTTGCACCTaGTCGATGCACGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGHVRCT*SMHGEK
Trigger: CTTCTCACCGTGCATCGAGCAGGTGCAACGCACATG...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATGCTGACCATATAAGGTaGCTCTGGCCTCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHADHIR*LWPPCP
Trigger: TGGGCAGGGAGGCCAGAGGCACCTTATATGGTCAGC...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATACTTGCCTGGTTGCCTaGGGCAGACAACCCACTCTG +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHTCLVA*GRQPTL
Trigger: CAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAAGT...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGACACACTTGCCTGGTTaGCTGCGGCAGACAACCCAC +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILTHLPG*LRQTTH
Trigger: GTGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGT...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCACCCATCAGACACCATaGAGGCCTTTGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSTHQTP*RPLLWP
Trigger: TGGCCACAGCAAAGGCCTGCATGGTGTCTGATGGGT...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATTACGGTGGGGGTGGATaGCTGGAGGCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHYGGGG*LEAQGH
Trigger: ATGACCTTGAGCCTCCAGGCATCCACCCCCACCGTA...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCGAGATCTCAGGGGTGTaGGTCACCCAGTTCATGACA +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSEISGV*VTQFMT
Trigger: TGTCATGAACTGGGTGACGCACACCCCTGAGATCTC...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATACCCATCAGACACCATaGAGGCCTTTGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHTHQTP*RPLLWP
Trigger: TGGCCACAGCAAAGGCCTGCATGGTGTCTGATGGGT...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCTTTGCCCCTTTGTCCTaGAGACTGGAGCGCCTATCA +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSFAPLS*RLERLS
Trigger: TGATAGGCGCTCCAGTCTCCAGGACAAAGGGGCAAA...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGAAAATGGGCACAACCTaGACCCTACGGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILKMGTT*TLRCLR
Trigger: CCTCAGGCACCGTAGGGTCCAGGTTGTGCCCATTTT...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGGAGATCTCAGGGGTGTaGGTCACCCAGTTCATGACA +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILEISGV*VTQFMT
Trigger: TGTCATGAACTGGGTGACGCACACCCCTGAGATCTC...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCACCCAGGGGAGCCTGTaGCAGTGGATACTTCATATT +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSTQGSL*QWILHI
Trigger: AATATGAAGTATCCACTGCCACAGGCTCCCCTGGGT...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATTTTTCTGCAGCCAGATaGGGGTGGCCACACATTTGC +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHFSAAR*GWPHIC
Trigger: GCAAATGTGTGGCCACCCCCATCTGGCTGCAGAAAA...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCGGACGGTACGTTTATTaGTCATCACTCACACTTGGG +
Preference number: 4 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSGRYVY*SSLTLG
Trigger: CCCAAGTGTGAGTGATGAGCAATAAACGTACCGTCC...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAGTGGATACTTCATATTaGCAACAAACAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSVDTSY*QQTAAG
Trigger: CCCAGCTGCTGTTTGTTGCCAATATGAAGTATCCAC...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATGGGAGCCTGTGGCAGTaGATACTTCATATTGGCAAC +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHGSLWQ*ILHIGN
Trigger: GTTGCCAATATGAAGTATCCACTGCCACAGGCTCCC...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGGGGAGCCTGTGGCAGTaGATACTTCATATTGGCAAC +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILGSLWQ*ILHIGN
Trigger: GTTGCCAATATGAAGTATCCACTGCCACAGGCTCCC...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGCCTCTGTCCCCACTTTaGGAAATGCCCCTAAGCTTA +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILPLSPL*EMPLSL
Trigger: TAAGCTTAGGGGCATTTCCCAAAGTGGGGACAGAGG...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGCTTTGTCCTGGAGACTaGAGCGCCTATCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILLCPGD*SAYHAK
Trigger: TTTGGCATGATAGGCGCTCCAGTCTCCAGGACAAAG...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR TCA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGTTAGCCTTTAAGAGGTaGTCACATAGGCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: HPLASTPRGACGSGYFILLAFKR*SHRHCP
Trigger: GGGACAGTGCCTATGTGATCACCTCTTAAAGGCTAA...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATGGACGGTACGTTTATTaGTCATCACTCACACTTGGG +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHGRYVY*SSLTLG
Trigger: CCCAAGTGTGAGTGATGAGCAATAAACGTACCGTCC...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CCA 90 bp AGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTAAGGGTGTGTCCTATAAACCATaGAGCTGCGCCTCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SRAEGIDTATLSHVTTKGVSYKP*SCASKK
Trigger: TTTCTTTGAGGCGCAGCTCCATGGTTTATAGGACAC...ACCCTTAGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR GCA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATTATAAACCATGGAGCTaGGCCTCAAAGAAACACCTC +
Preference number: 4 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHYKPWS*ASKKHL
Trigger: GAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATA...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 90 bp TGTGGCCCACGGCCTCCTTCATGGGCGTGCCGCTGCGGAAGGGGCTaGTGTCGGAGCCGGCAGGGCCATCTGTGCCTGTGCCCAGGTCGG +
Preference number: 5 (lower is better)
Translates to: CGPRPPSWACRCGRG*CRSRQGHLCLCPGR
Trigger: CCGACCTGGGCACAGGCACAGATGGCCCTGCCGGCTCCGACACCAGCCCCTTCCGCAGCGGCACGCCCATGAAGGAGGCCGTGGGCCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 90 bp TGGTGGCGAAGGTCAGGTAGCCGGTGTGGCCCACGGCCTCCTTCATaGGCGTGCCGCTGCGGAAGGGGCTGGTGTCGGAGCCGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: WWRRSGSRCGPRPPS*ACRCGRGWCRSRQG
Trigger: GCCCTGCCGGCTCCGACACCAGCCCCTTCCGCAGCGGCACGCCCATGAAGGAGGCCGTGGGCCACACCGGCTACCTGACCTTCGCCACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 90 bp CGGCACACGTCCTGGGTGCGCACAGTCACCCAGCGGCCCACACGGTaGTCCTGGAACTCCTCCCGGGCCTTCTCTGCCCGCTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: RHTSWVRTVTQRPTR*SWNSSRAFSARCWW
Trigger: CCACCAGCAGCGGGCAGAGAAGGCCCGGGAGGAGTTCCAGGAGCACCGTGTGGGCCGCTGGGTGACTGTGCGCACCCAGGACGTGTGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 90 bp CCAGCTCCCTGGTGCCCTGGGAGGCGGCCCCCTAGCCTGGGGTCTTaGTGGCGAAGGTCAGGTAGCCGGTGTGGCCCACGGCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: PAPWCPGRRPPSLGS*WRRSGSRCGPRPPS
Trigger: TGAAGGAGGCCGTGGGCCACACCGGCTACCTGACCTTCGCCACCAAGACCCCAGGCTAGGGGGCCGCCTCCCAGGGCACCAGGGAGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS TCA 90 bp TTCGACCTTGAGGGCGTCCCAGGCGTGGCCCACGGCCTCCCAGGGTaGTGGGATGTCCAGGAAGACGGCGTCGGCCACGTGGCTCACGCC +
Preference number: 5 (lower is better)
Translates to: FDLEGVPGVAHGLPG*WDVQEDGVGHVAHA
Trigger: GGCGTGAGCCACGTGGCCGACGCCGTCTTCCTGGACATCCCATCACCCTGGGAGGCCGTGGGCCACGCCTGGGACGCCCTCAAGGTCGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 90 bp CCAGCGGCCCACACGGTGCTCCTGGAACTCCTCCCGGGCCTTCTCTaGCCGCTGCTGGTGGAACTCCACCGTGTGCAGGTGACCCGTGGG +
Preference number: 5 (lower is better)
Translates to: PAAHTVLLELLPGLL*PLLVELHRVQVTRG
Trigger: CCCACGGGTCACCTGCACACGGTGGAGTTCCACCAGCAGCGGGCAGAGAAGGCCCGGGAGGAGTTCCAGGAGCACCGTGTGGGCCGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 90 bp GCGTCGGCCACGTGGCTCACGCCAAAGCCACTGCGGCACACGTCCTaGGTGCGCACAGTCACCCAGCGGCCCACACGGTGCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: ASATWLTPKPLRHTS*VRTVTQRPTRCSWN
Trigger: GTTCCAGGAGCACCGTGTGGGCCGCTGGGTGACTGTGCGCACCCAGGACGTGTGCCGCAGTGGCTTTGGCGTGAGCCACGTGGCCGACGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GTTCCTGGGCTGGCCTGGTCTCCTAGCGCTGGGGAGAGCAGGGCAGGGATTCTGCGCCCGCCTTCGACCTaGAGGGCGTCCCAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: VPGLAWSPSAGESRAGILRPPST*RASQAW
Trigger: CCACGCCTGGGACGCCCTCAAGGTCGAAGGCGGGCG...CAGAATCCCTGCCCTGCTCTCCCCAGCGCTAGGAGACCAGGCCAGCCCAGGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 90 bp CGGCCACGTGGCTCACGCCAAAGCCACTGCGGCACACGTCCTGGGTaGGCACAGTCACCCAGCGGCCCACACGGTGCTCCTGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: RPRGSRQSHCGTRPG*AQSPSGPHGAPGTP
Trigger: AGGAGTTCCAGGAGCACCGTGTGGGCCGCTGGGTGACTGTGCGCACCCAGGACGTGTGCCGCAGTGGCTTTGGCGTGAGCCACGTGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 90 bp TGTCCAGGAAGACGGCGTCGGCCACGTGGCTCACGCCAAAGCCACTaGGGCACACGTCCTGGGTGCGCACAGTCACCCAGCGGCCCACAC +
Preference number: 5 (lower is better)
Translates to: CPGRRRRPRGSRQSH*GTRPGCAQSPSGPH
Trigger: GTGTGGGCCGCTGGGTGACTGTGCGCACCCAGGACGTGTGCCGCAGTGGCTTTGGCGTGAGCCACGTGGCCGACGCCGTCTTCCTGGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 90 bp TGCGTGCGGTGCGGCAGGTTCAGCGTCCAGAGCTCGGGCGTGGGGTaGAGCACATACACCCAGCCACCTCGGCCGCACGTCACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: CVRCGRFSVQSSGVG*STYTQPPRPHVTLE
Trigger: CTCCAAGGTGACGTGCGGCCGAGGTGGCTGGGTGTATGTGCTGCACCCCACGCCCGAGCTCTGGACGCTGAACCTGCCGCACCGCACGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS CCA 90 bp ACGTCCTGGGTGCGCACAGTCACCCAGCGGCCCACACGGTGCTCCTaGAACTCCTCCCGGGCCTTCTCTGCCCGCTGCTGGTGGAACTCC +
Preference number: 5 (lower is better)
Translates to: TSWVRTVTQRPTRCS*NSSRAFSARCWWNS
Trigger: GGAGTTCCACCAGCAGCGGGCAGAGAAGGCCCGGGAGGAGTTCCAGGAGCACCGTGTGGGCCGCTGGGTGACTGTGCGCACCCAGGACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 90 bp AAGGAGCAGAAGCGCCCGCCTTCGACCTTGAGGGCGTCCCAGGCGTaGCCCACGGCCTCCCAGGGTGATGGGATGTCCAGGAAGACGGCG +
Preference number: 5 (lower is better)
Translates to: KEQKRPPSTLRASQA*PTASQGDGMSRKTA
Trigger: CGCCGTCTTCCTGGACATCCCATCACCCTGGGAGGCCGTGGGCCACGCCTGGGACGCCCTCAAGGTCGAAGGCGGGCGCTTCTGCTCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 90 bp GTCGGAGCCGGCAGGGCCATCTGTGCCTGTGCCCAGGTCGGGCGGTaGCAGGCTGACAGTGCGCACGTTGTAGACCTGTGGCAGCACCTC +
Preference number: 5 (lower is better)
Translates to: VGAGRAICACAQVGR*QADSAHVVDLWQHL
Trigger: GAGGTGCTGCCACAGGTCTACAACGTGCGCACTGTCAGCCTGCCACCGCCCGACCTGGGCACAGGCACAGATGGCCCTGCCGGCTCCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 90 bp GGATCTGCGTGCGGTGCGGCAGGTTCAGCGTCCAGAGCTCGGGCGTaGGGTGCAGCACATACACCCAGCCACCTCGGCCGCACGTCACCT +
Preference number: 5 (lower is better)
Translates to: GSACGAAGSASRARA*GAAHTPSHLGRTSP
Trigger: AGGTGACGTGCGGCCGAGGTGGCTGGGTGTATGTGCTGCACCCCACGCCCGAGCTCTGGACGCTGAACCTGCCGCACCGCACGCAGATCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS TCA 90 bp GCCGCACGTCACCTTGGAGCCGAAGGGGCGGCCGATAAGGTCAACTaGGTGCCGCAGGACACCATGCCGGGTCTGGGTCTGTGCCCCACG +
Preference number: 5 (lower is better)
Translates to: AARHLGAEGAADKVN*VPQDTMPGLGLCPT
Trigger: CGTGGGGCACAGACCCAGACCCGGCATGGTGTCCTGCGGCACTCAGTTGACCTTATCGGCCGCCCCTTCGGCTCCAAGGTGACGTGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS CCA 90 bp GCCTCCCAGGGTGATGGGATGTCCAGGAAGACGGCGTCGGCCACGTaGCTCACGCCAAAGCCACTGCGGCACACGTCCTGGGTGCGCACA +
Preference number: 5 (lower is better)
Translates to: ASQGDGMSRKTASAT*LTPKPLRHTSWVRT
Trigger: TGTGCGCACCCAGGACGTGTGCCGCAGTGGCTTTGGCGTGAGCCACGTGGCCGACGCCGTCTTCCTGGACATCCCATCACCCTGGGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGCCCTACCCCACACCGTaGTCACTGTGGAGGGACCTC +
Preference number: 5 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGPYPTP*SLWRDL
Trigger: GAGGTCCCTCCACAGTGACAACGGTGTGGGGTAGGG...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS TCA 90 bp GGAACTCCACCGTGTGCAGGTGACCCGTGGGTGCAATGGTGCGGATaGTGGCGTGGGACACAGAGCCACTGCCGGTGCCTGCGACGCTCC +
Preference number: 5 (lower is better)
Translates to: GTPPCAGDPWVQWCG*WRGTQSHCRCLRRS
Trigger: GGAGCGTCGCAGGCACCGGCAGTGGCTCTGTGTCCCACGCCATCATCCGCACCATTGCACCCACGGGTCACCTGCACACGGTGGAGTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299202.4
CDS TCA 90 bp CGCTGCCAGCGCCTGGCATGTGCGTTGCACCTGCTCGATGCACGGTaGGAAGGAGCAGAAGCGCCCGCCTTCGACCTTGAGGGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: RCQRLACALHLLDAR*EGAEAPAFDLEGVP
Trigger: TGGGACGCCCTCAAGGTCGAAGGCGGGCGCTTCTGCTCCTTCTCACCGTGCATCGAGCAGGTGCAACGCACATGCCAGGCGCTGGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS TCA 90 bp GCGCACGTTGTAGACCTGTGGCAGCACCTCCAGGGTGCTCAGCTCTaGGAAGCCGCGCGCTGCCAGCGCCTGGCATGTGCGTTGCACCTG +
Preference number: 5 (lower is better)
Translates to: AHVVDLWQHLQGAQL*EAARCQRLACALHL
Trigger: CAGGTGCAACGCACATGCCAGGCGCTGGCAGCGCGCGGCTTCTCAGAGCTGAGCACCCTGGAGGTGCTGCCACAGGTCTACAACGTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 90 bp CACGTCACCTTGGAGCCGAAGGGGCGGCCGATAAGGTCAACTGAGTaGCGCAGGACACCATGCCGGGTCTGGGTCTGTGCCCCACGCTGC +
Preference number: 5 (lower is better)
Translates to: HVTLEPKGRPIRSTE*RRTPCRVWVCAPRC
Trigger: GCAGCGTGGGGCACAGACCCAGACCCGGCATGGTGTCCTGCGGCACTCAGTTGACCTTATCGGCCGCCCCTTCGGCTCCAAGGTGACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CAA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCCCCCACCTGCACCCTTaGGCTTCAACACCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAPHLHP*ASTPRG
Trigger: TCCCCTGGGTGTTGAAGCCAAAGGGTGCAGGTGGGG...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCACACCATGCAGGCCTTaGCTGTGGCCAGGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDATPCRP*LWPGGA
Trigger: TGCCCCTCCTGGCCACAGCAAAGGCCTGCATGGTGT...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTCGGCCGCACGTCACCTaGGAGCCGAAGGGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCRPHVT*EPKGRP
Trigger: CGGCCGCCCCTTCGGCTCCAAGGTGACGTGCGGCCG...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS TCA 90 bp CGGGCCTTCTCTGCCCGCTGCTGGTGGAACTCCACCGTGTGCAGGTaGCCCGTGGGTGCAATGGTGCGGATGATGGCGTGGGACACAGAG +
Preference number: 5 (lower is better)
Translates to: RAFSARCWWNSTVCR*PVGAMVRMMAWDTE
Trigger: CTCTGTGTCCCACGCCATCATCCGCACCATTGCACCCACGGGTCACCTGCACACGGTGGAGTTCCACCAGCAGCGGGCAGAGAAGGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 90 bp TGCCCGCTGCTGGTGGAACTCCACCGTGTGCAGGTGACCCGTGGGTaGAATGGTGCGGATGATGGCGTGGGACACAGAGCCACTGCCGGT +
Preference number: 5 (lower is better)
Translates to: CPLLVELHRVQVTRG*NGADDGVGHRATAG
Trigger: ACCGGCAGTGGCTCTGTGTCCCACGCCATCATCCGCACCATTGCACCCACGGGTCACCTGCACACGGTGGAGTTCCACCAGCAGCGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 90 bp ACCTCCAGGGTGCTCAGCTCTGAGAAGCCGCGCGCTGCCAGCGCCTaGCATGTGCGTTGCACCTGCTCGATGCACGGTGAGAAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: TSRVLSSEKPRAASA*HVRCTCSMHGEKEQ
Trigger: CTGCTCCTTCTCACCGTGCATCGAGCAGGTGCAACGCACATGCCAGGCGCTGGCAGCGCGCGGCTTCTCAGAGCTGAGCACCCTGGAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGCGCCTGGCATGTGCGTaGCACCTGCTCGATGCACGG +
Preference number: 5 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGERLACA*HLLDAR
Trigger: CCGTGCATCGAGCAGGTGCAACGCACATGCCAGGCG...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGCGCCTGGCATGTGCGTaGCACCTGCTCGATGCACGG +
Preference number: 5 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVRLACA*HLLDAR
Trigger: CCGTGCATCGAGCAGGTGCAACGCACATGCCAGGCG...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTCCCCACCTGCACCCTTaGGCTTCAACACCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAPHLHP*ASTPRG
Trigger: TCCCCTGGGTGTTGAAGCCAAAGGGTGCAGGTGGGG...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp TTGCCTGGTTGCCTGCGGCAGACAACCCACTCTGCCGCTCCTCTCCGCAGCGCTGGGATGCCCCGCCTCTaGGACATGAGTGGACGAAGG +
Preference number: 5 (lower is better)
Translates to: LPGCLRQTTHSAAPLRSAGMPRL*DMSGRR
Trigger: CCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC...AGCGCTGCGGAGAGGAGCGGCAGAGTGGGTTGTCTGCCGCAGGCAACCAGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCGACACACTTGCCTGGTaGCCTGCGGCAGACAACCCA +
Preference number: 5 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDADTLAW*PAADNP
Trigger: TGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTC...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GGACCTCCCGCTCTCCATGTGCGGACCCTGGTGACTCACCCAGGGCTGCCACCAACCTCCTCCATGCCCTaGGCTTCTGTGAGGGGTAGG +
Preference number: 5 (lower is better)
Translates to: GPPALHVRTLVTHPGLPPTSSMP*ASVRGR
Trigger: CCTACCCCTCACAGAAGCCAAGGGCATGGAGGAGGT...TGGTGGCAGCCCTGGGTGAGTCACCAGGGTCCGCACATGGAGAGCGGGAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACCCAGCCCCGACACACTaGCCTGGTTGCCTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDPAPTH*PGCLRQ
Trigger: CTGCCGCAGGCAACCAGGCAAGTGTGTCGGGGCTGG...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp CACAGGCACTGCTCCTTCCTTGAGGCTGTCAGACACCAGGGCGGGCGAGGAGAGCCCTACCCCACACCGTaGTCACTGTGGAGGGACCTC +
Preference number: 5 (lower is better)
Translates to: HRHCSFLEAVRHQGGRGEPYPTP*SLWRDL
Trigger: GAGGTCCCTCCACAGTGACAACGGTGTGGGGTAGGG...CTCTCCTCGCCCGCCCTGGTGTCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS TCA 90 bp TGCCCCACGCTGCACACGCACCGCCACCATTGCACCATGGCCCAGTaGCAGGATGGCCGTGTCACCCTCCTTGATCAGCTCCTCGTATGC +
Preference number: 5 (lower is better)
Translates to: CPTLHTHRHHCTMAQ*QDGRVTLLDQLLVC
Trigger: GCATACGAGGAGCTGATCAAGGAGGGTGACACGGCCATCCTGTCACTGGGCCATGGTGCAATGGTGGCGGTGCGTGTGCAGCGTGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS TCA 90 bp GGAACTCCACCGTGTGCAGGTGACCCGTGGGTGCAATGGTGCGGATaGTGGCGTGGGACACAGAGCCACTGCCGGTGCCAGACTCACAGA +
Preference number: 5 (lower is better)
Translates to: GTPPCAGDPWVQWCG*WRGTQSHCRCQTHR
Trigger: TCTGTGAGTCTGGCACCGGCAGTGGCTCTGTGTCCCACGCCATCATCCGCACCATTGCACCCACGGGTCACCTGCACACGGTGGAGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CAA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGGACACACTTGCCTGGTaGCCTGCGGCAGACAACCCA +
Preference number: 5 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVDTLAW*PAADNP
Trigger: TGGGTTGTCTGCCGCAGGCAACCAGGCAAGTGTGTC...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GGGATGCCCCGCCTCTTGGACATGAGTGGACGAAGGCCTGGGCTGAGCTCAGTGACCTCCTCCATGCCCTaGGCTTCTGTGAGGGGTAGG +
Preference number: 5 (lower is better)
Translates to: GMPRLLDMSGRRPGLSSVTSSMP*ASVRGR
Trigger: CCTACCCCTCACAGAAGCCAAGGGCATGGAGGAGGT...CACTGAGCTCAGCCCAGGCCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GAGTGGGGTGAGGCCCAGCTGGGTCTAGAGGGCCATACGGTGGGGGTGGATGCCCCCTCTGTCCCCACTTaGGGAAATGCCCCTAAGCTT +
Preference number: 5 (lower is better)
Translates to: EWGEAQLGLEGHTVGVDAPSVPT*GNAPKL
Trigger: AAGCTTAGGGGCATTTCCCAAAGTGGGGACAGAGGG...GGCATCCACCCCCACCGTATGGCCCTCTAGACCCAGCTGGGCCTCACCCCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACGGGATGCCCCGCCTCTaGGACATGAGTGGACGAAGG +
Preference number: 5 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDGMPRL*DMSGRR
Trigger: CCTTCGTCCACTCATGTCCAAGAGGCGGGGCATCCC...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp TGGAGCCTCGGCCCGGGGACTGGAGAAGCACGAGATGGTCTCAGGCCCCGTGGGGGGACGGTACGTTTATaGCTCATCACTCACACTTGG +
Preference number: 5 (lower is better)
Translates to: WSLGPGTGEARDGLRPRGGTVRL*LITHTW
Trigger: CCAAGTGTGAGTGATGAGCAATAAACGTACCGTCCC...CCCACGGGGCCTGAGACCATCTCGTGCTTCTCCAGTCCCCGGGCCGAGGCTCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCACACCATGCAGGCCTTaGCTGTGGCCAGGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPTPCRP*LWPGGA
Trigger: TGCCCCTCCTGGCCACAGCAAAGGCCTGCATGGTGT...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GAGATCTCAGGGGTGTGCGTCACCCAGTTCATGACACCCCAGGGACAGCCTGACTCACCCACTTCCATGTaGAACCTGACTGGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: EISGVCVTQFMTPQGQPDSPTSM*NLTGGP
Trigger: GGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGA...GTCAGGCTGTCCCTGGGGTGTCATGAACTGGGTGACGCACACCCCTGAGATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp CAGAGCAGCAGGGCCGAGGGGATTGACACAGCAACTCTGTCCCATGTGACAACTGCAGGGCCGAGGGGATaGACACAGCAACTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: QSSRAEGIDTATLSHVTTAGPRG*TQQLCP
Trigger: GGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGC...AGTTGTCACATGGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTGCCGTGTCACCCTCCTaGATCAGCTCCTCGTATGCC +
Preference number: 5 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCAVSPS*ISSSYA
Trigger: GGCATACGAGGAGCTGATCAAGGAGGGTGACACGGC...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS-3UTR CAA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACACATTTGCCCCTTaGTCCTGGAGACTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSHTFAP*SWRLER
Trigger: GCGCTCCAGTCTCCAGGACAAAGGGGCAAATGTGTG...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGGCAGGGCCGAGGGGATaGACACAGCAACTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: HPLASTPRGACGSGYFILAGPRG*TQQLCP
Trigger: GGGACAGAGTTGCTGTGTCAATCCCCTCGGCCCTGC...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp CACAACCTGGACCCTACGGTGCCTGAGGCCTATGTGTCCTATAAACCATGGAGCCACACATTTGCCCCTTaGTCCTGGAGACTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: HNLDPTVPEAYVSYKPWSHTFAP*SWRLER
Trigger: GCGCTCCAGTCTCCAGGACAAAGGGGCAAATGTGTG...GCTCCATGGTTTATAGGACACATAGGCCTCAGGCACCGTAGGGTCCAGGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp CACCCTTTGGCTTCAACACCCAGGGGAGCCTGTGGCAGTGGATACTTCATATTGGGGGTGGCCACACATTaGCCCCTTTGTCCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: HPLASTPRGACGSGYFILGVATH*PLCPGD
Trigger: GTCTCCAGGACAAAGGGGCAAATGTGTGGCCACCCC...CAATATGAAGTATCCACTGCCACAGGCTCCCCTGGGTGTTGAAGCCAAAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp TCCTATAAACCATGGAGCTGCGCCTCAAAGAAACACCTCCCGGTGTCCACCCATTCACCCACTTCCATGTaGAACCTGACTGGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SYKPWSCASKKHLPVSTHSPTSM*NLTGGP
Trigger: GGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGA...ATGGGTGGACACCGGGAGGTGTTTCTTTGAGGCGCAGCTCCATGGTTTATAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp AGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCACACCCCAGTGGATACTTCATATaGGCAACAAACAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RGRGTHIVPGLTGWHSHPSGYFI*ATNSSW
Trigger: CCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACT...GGGGTGTGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp TCTGTGAGGGGTAGGGGTACCCACATAGTTCCGGGACTCACAGGCTGGCATTCAGGGACGGTACGTTTATaGCTCATCACTCACACTTGG +
Preference number: 5 (lower is better)
Translates to: SVRGRGTHIVPGLTGWHSGTVRL*LITHTW
Trigger: CCAAGTGTGAGTGATGAGCAATAAACGTACCGTCCC...TGAATGCCAGCCTGTGAGTCCCGGAACTATGTGGGTACCCCTACCCCTCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS-3UTR CAA 90 bp GGCATTAGGGTCACCCACTTCCATGTTGAACCTGACTGGGGGCCCCTCCTCTGTAGTGGATACTTCATATaGGCAACAAACAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GIRVTHFHVEPDWGPLLCSGYFI*ATNSSW
Trigger: CCAGCTGCTGTTTGTTGCCAATATGAAGTATCCACT...ACAGAGGAGGGGCCCCCAGTCAGGTTCAACATGGAAGTGGGTGACCCTAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 72 bp GGTAGCCGGTGTGGCCCACGGCCTCCTTCATGGGCGTaGCGCTGCGGAAGGGGCTGGTGTCGGAGCCGGCAG +
Preference number: 6 (lower is better)
Translates to: GSRCGPRPPSWA*RCGRGWCRSRQ
Trigger: CTGCCGGCTCCGACACCAGCCCCTTCCGCAGCGGCACGCCCATGAAGGAGGCCGTGGGCCACACCGGCTACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 72 bp TGTCTGGCAAGGGCCAAGGACCTGCGACGCTCCTGCTaGCGGGGCTCCACACGTGCCTCCGCGACGCGCGGC +
Preference number: 6 (lower is better)
Translates to: CLARAKDLRRSC*RGSTRASATRG
Trigger: GCCGCGCGTCGCGGAGGCACGTGTGGAGCCCCGGCAGCAGGAGCGTCGCAGGTCCTTGGCCCTTGCCAGACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS TCA 72 bp GAGGGCGTCCCAGGCGTGGCCCACGGCCTCCCAGGGTaGTGGGATGTCCAGGAAGACGGCGTCGGCCACGTG +
Preference number: 6 (lower is better)
Translates to: EGVPGVAHGLPG*WDVQEDGVGHV
Trigger: CACGTGGCCGACGCCGTCTTCCTGGACATCCCATCACCCTGGGAGGCCGTGGGCCACGCCTGGGACGCCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 72 bp CGGCCTCCTTCATGGGCGTGCCGCTGCGGAAGGGGCTaGTGTCGGAGCCGGCAGGGCCATCTGTGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: RPPSWACRCGRG*CRSRQGHLCLC
Trigger: GCACAGGCACAGATGGCCCTGCCGGCTCCGACACCAGCCCCTTCCGCAGCGGCACGCCCATGAAGGAGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 72 bp TCCTGGGTGCGCACAGTCACCCAGCGGCCCACACGGTaGTCCTGGAACTCCTCCCGGGCCTTCTCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: SWVRTVTQRPTR*SWNSSRAFSAR
Trigger: GCGGGCAGAGAAGGCCCGGGAGGAGTTCCAGGAGCACCGTGTGGGCCGCTGGGTGACTGTGCGCACCCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 72 bp GTGCGCACAGTCACCCAGCGGCCCACACGGTGCTCCTaGAACTCCTCCCGGGCCTTCTCTGCCCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: VRTVTQRPTRCS*NSSRAFSARCW
Trigger: CCAGCAGCGGGCAGAGAAGGCCCGGGAGGAGTTCCAGGAGCACCGTGTGGGCCGCTGGGTGACTGTGCGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 72 bp AAGCGCCCGCCTTCGACCTTGAGGGCGTCCCAGGCGTaGCCCACGGCCTCCCAGGGTGATGGGATGTCCAGG +
Preference number: 6 (lower is better)
Translates to: KRPPSTLRASQA*PTASQGDGMSR
Trigger: CCTGGACATCCCATCACCCTGGGAGGCCGTGGGCCACGCCTGGGACGCCCTCAAGGTCGAAGGCGGGCGCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 72 bp AGGTCAGGTAGCCGGTGTGGCCCACGGCCTCCTTCATaGGCGTGCCGCTGCGGAAGGGGCTGGTGTCGGAGC +
Preference number: 6 (lower is better)
Translates to: RSGSRCGPRPPS*ACRCGRGWCRS
Trigger: GCTCCGACACCAGCCCCTTCCGCAGCGGCACGCCCATGAAGGAGGCCGTGGGCCACACCGGCTACCTGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 72 bp TGCGGTGCGGCAGGTTCAGCGTCCAGAGCTCGGGCGTaGGGTGCAGCACATACACCCAGCCACCTCGGCCGC +
Preference number: 6 (lower is better)
Translates to: CGAAGSASRARA*GAAHTPSHLGR
Trigger: GCGGCCGAGGTGGCTGGGTGTATGTGCTGCACCCCACGCCCGAGCTCTGGACGCTGAACCTGCCGCACCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS GCA 72 bp AGACGGCGTCGGCCACGTGGCTCACGCCAAAGCCACTaGGGCACACGTCCTGGGTGCGCACAGTCACCCAGC +
Preference number: 6 (lower is better)
Translates to: RRRRPRGSRQSH*GTRPGCAQSPS
Trigger: GCTGGGTGACTGTGCGCACCCAGGACGTGTGCCGCAGTGGCTTTGGCGTGAGCCACGTGGCCGACGCCGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 72 bp TGCGGCAGGTTCAGCGTCCAGAGCTCGGGCGTGGGGTaGAGCACATACACCCAGCCACCTCGGCCGCACGTC +
Preference number: 6 (lower is better)
Translates to: CGRFSVQSSGVG*STYTQPPRPHV
Trigger: GACGTGCGGCCGAGGTGGCTGGGTGTATGTGCTGCACCCCACGCCCGAGCTCTGGACGCTGAACCTGCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS CCA 72 bp GGCAGGGCCATCTGTGCCTGTGCCCAGGTCGGGCGGTaGCAGGCTGACAGTGCGCACGTTGTAGACCTGTGG +
Preference number: 6 (lower is better)
Translates to: GRAICACAQVGR*QADSAHVVDLW
Trigger: CCACAGGTCTACAACGTGCGCACTGTCAGCCTGCCACCGCCCGACCTGGGCACAGGCACAGATGGCCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CAA 90 bp GTGGGGTGCAGCACATACACCCAGCCACCTCGGCCGCACGTCACCTaGGAGCCGAAGGGGCGGCCGATAAGGTCAACTGAGTGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: VGCSTYTQPPRPHVT*EPKGRPIRSTECRR
Trigger: CCTGCGGCACTCAGTTGACCTTATCGGCCGCCCCTTCGGCTCCAAGGTGACGTGCGGCCGAGGTGGCTGGGTGTATGTGCTGCACCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS TCA 72 bp CCGTGTGCAGGTGACCCGTGGGTGCAATGGTGCGGATaGTGGCGTGGGACACAGAGCCACTGCCGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: PCAGDPWVQWCG*WRGTQSHCRCL
Trigger: CAGGCACCGGCAGTGGCTCTGTGTCCCACGCCATCATCCGCACCATTGCACCCACGGGTCACCTGCACACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299202.4
CDS TCA 72 bp CCGTGTGCAGGTGACCCGTGGGTGCAATGGTGCGGATaGTGGCGTGGGACACAGAGCCACTGCCGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: PCAGDPWVQWCG*WRGTQSHCRCQ
Trigger: CTGGCACCGGCAGTGGCTCTGTGTCCCACGCCATCATCCGCACCATTGCACCCACGGGTCACCTGCACACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS GCA 72 bp CACACGGTGCTCCTGGAACTCCTCCCGGGCCTTCTCTaGCCGCTGCTGGTGGAACTCCACCGTGTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: HTVLLELLPGLL*PLLVELHRVQV
Trigger: CACCTGCACACGGTGGAGTTCCACCAGCAGCGGGCAGAGAAGGCCCGGGAGGAGTTCCAGGAGCACCGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 72 bp GCTCTGAGAAGCCGCGCGCTGCCAGCGCCTGGCATGTaGGTTGCACCTGCTCGATGCACGGTGAGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: ALRSRALPAPGM*VAPARCTVRRS
Trigger: GCTCCTTCTCACCGTGCATCGAGCAGGTGCAACGCACATGCCAGGCGCTGGCAGCGCGCGGCTTCTCAGAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 72 bp TGCGCACGTTGTAGACCTGTGGCAGCACCTCCAGGGTaGTCAGCTCTGAGAAGCCGCGCGCTGCCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: CARCRPVAAPPG*SALRSRALPAP
Trigger: AGGCGCTGGCAGCGCGCGGCTTCTCAGAGCTGAGCACCCTGGAGGTGCTGCCACAGGTCTACAACGTGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 72 bp AGGACACCATGCCGGGTCTGGGTCTGTGCCCCACGCTaGACACGCACCGCCACCATTGCACCATGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: RTPCRVWVCAPR*TRTATIAPWPS
Trigger: ACTGGGCCATGGTGCAATGGTGGCGGTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS GCA 72 bp CGGCCGATAAGGTCAACTGAGTGCCGCAGGACACCATaGCGGGTCTGGGTCTGTGCCCCACGCTGCACACGC +
Preference number: 6 (lower is better)
Translates to: RPIRSTECRRTP*RVWVCAPRCTR
Trigger: GCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGTGTCCTGCGGCACTCAGTTGACCTTATCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS CCA 72 bp GGTGATGGGATGTCCAGGAAGACGGCGTCGGCCACGTaGCTCACGCCAAAGCCACTGCGGCACACGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GDGMSRKTASAT*LTPKPLRHTSW
Trigger: CCAGGACGTGTGCCGCAGTGGCTTTGGCGTGAGCCACGTGGCCGACGCCGTCTTCCTGGACATCCCATCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 72 bp GTGCTCAGCTCTGAGAAGCCGCGCGCTGCCAGCGCCTaGCATGTGCGTTGCACCTGCTCGATGCACGGTGAG +
Preference number: 6 (lower is better)
Translates to: VLSSEKPRAASA*HVRCTCSMHGE
Trigger: CTCACCGTGCATCGAGCAGGTGCAACGCACATGCCAGGCGCTGGCAGCGCGCGGCTTCTCAGAGCTGAGCAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CCA 72 bp GCCCCACGCTGCACACGCACCGCCACCATTGCACCATaGCCCAGTGACAGGATGGCCGTGTCACCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: APRCTRTATIAP*PSDRMAVSPSL
Trigger: CAAGGAGGGTGACACGGCCATCCTGTCACTGGGCCATGGTGCAATGGTGGCGGTGCGTGTGCAGCGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS TCA 72 bp TCTGCCCGCTGCTGGTGGAACTCCACCGTGTGCAGGTaGCCCGTGGGTGCAATGGTGCGGATGATGGCGTGG +
Preference number: 6 (lower is better)
Translates to: SARCWWNSTVCR*PVGAMVRMMAW
Trigger: CCACGCCATCATCCGCACCATTGCACCCACGGGTCACCTGCACACGGTGGAGTTCCACCAGCAGCGGGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS TCA 72 bp CACCTTGGAGCCGAAGGGGCGGCCGATAAGGTCAACTaGGTGCCGCAGGACACCATGCCGGGTCTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: HLGAEGAADKVN*VPQDTMPGLGL
Trigger: CAGACCCAGACCCGGCATGGTGTCCTGCGGCACTCAGTTGACCTTATCGGCCGCCCCTTCGGCTCCAAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS GCA 72 bp CTGCCAGCGCCTGGCATGTGCGTTGCACCTGCTCGATaGACGGTGAGAAGGAGCAGAAGCGCCCGCCTTCGA +
Preference number: 6 (lower is better)
Translates to: LPAPGMCVAPAR*TVRRSRSARLR
Trigger: TCGAAGGCGGGCGCTTCTGCTCCTTCTCACCGTGCATCGAGCAGGTGCAACGCACATGCCAGGCGCTGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS TCA 72 bp CGCCTGGCATGTGCGTTGCACCTGCTCGATGCACGGTaGGAAGGAGCAGAAGCGCCCGCCTTCGACCTTGAG +
Preference number: 6 (lower is better)
Translates to: RLACALHLLDAR*EGAEAPAFDLE
Trigger: CTCAAGGTCGAAGGCGGGCGCTTCTGCTCCTTCTCACCGTGCATCGAGCAGGTGCAACGCACATGCCAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS GCA 72 bp CTGGTGGAACTCCACCGTGTGCAGGTGACCCGTGGGTaGAATGGTGCGGATGATGGCGTGGGACACAGAGCC +
Preference number: 6 (lower is better)
Translates to: LVELHRVQVTRG*NGADDGVGHRA
Trigger: GGCTCTGTGTCCCACGCCATCATCCGCACCATTGCACCCACGGGTCACCTGCACACGGTGGAGTTCCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299202.4
ENST00000389749.9
CDS CAA 72 bp AGCACATACACCCAGCCACCTCGGCCGCACGTCACCTaGGAGCCGAAGGGGCGGCCGATAAGGTCAACTGAG +
Preference number: 6 (lower is better)
Translates to: STYTQPPRPHVT*EPKGRPIRSTE
Trigger: CTCAGTTGACCTTATCGGCCGCCCCTTCGGCTCCAAGGTGACGTGCGGCCGAGGTGGCTGGGTGTATGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS TCA 72 bp CTGCACACGCACCGCCACCATTGCACCATGGCCCAGTaGCAGGATGGCCGTGTCACCCTCCTTGATCAGCTC +
Preference number: 6 (lower is better)
Translates to: LHTHRHHCTMAQ*QDGRVTLLDQL
Trigger: GAGCTGATCAAGGAGGGTGACACGGCCATCCTGTCACTGGGCCATGGTGCAATGGTGGCGGTGCGTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS CCA 72 bp CTCCTCGTATGCCACGAAGCTCATGGTGCTAATGTCTaGCAAGGGCCAAGGACCTGCGACGCTCCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: LLVCHEAHGANV*QGPRTCDAPAA
Trigger: GGCAGCAGGAGCGTCGCAGGTCCTTGGCCCTTGCCAGACATTAGCACCATGAGCTTCGTGGCATACGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS TCA 72 bp CATGGCCCAGTGACAGGATGGCCGTGTCACCCTCCTTaGTCAGCTCCTCGTATGCCACGAAGCTCATGGTGC +
Preference number: 6 (lower is better)
Translates to: HGPVTGWPCHPP*SAPRMPRSSWC
Trigger: GCACCATGAGCTTCGTGGCATACGAGGAGCTGATCAAGGAGGGTGACACGGCCATCCTGTCACTGGGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS CAA 72 bp CCATGGCCCAGTGACAGGATGGCCGTGTCACCCTCCTaGATCAGCTCCTCGTATGCCACGAAGCTCATGGTG +
Preference number: 6 (lower is better)
Translates to: PWPSDRMAVSPS*ISSSYATKLMV
Trigger: CACCATGAGCTTCGTGGCATACGAGGAGCTGATCAAGGAGGGTGACACGGCCATCCTGTCACTGGGCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS GCA 72 bp GATGGCCGTGTCACCCTCCTTGATCAGCTCCTCGTATaGCACGAAGCTCATGGTGCTAATGTCTGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: DGRVTLLDQLLV*HEAHGANVWQG
Trigger: CCCTTGCCAGACATTAGCACCATGAGCTTCGTGGCATACGAGGAGCTGATCAAGGAGGGTGACACGGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9
CDS CAA 90 bp ACCATTGCACCATGGCCCAGTGACAGGATGGCCGTGTCACCCTCCTaGATCAGCTCCTCGTATGCCACGAAGCTCATGGTGCTAATGTCT +
Preference number: 6 (lower is better)
Translates to: TIAPWPSDRMAVSPS*ISSSYATKLMVLMS
Trigger: AGACATTAGCACCATGAGCTTCGTGGCATACGAGGAGCTGATCAAGGAGGGTGACACGGCCATCCTGTCACTGGGCCATGGTGCAATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389749.9