RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRMT2B (Homo sapiens)

Ensembl gene IDs: ENSG00000188917

Ensembl transcript IDs: ENST00000372935.5, ENST00000372936.4, ENST00000372939.5, ENST00000478422.1, ENST00000488615.1, ENST00000545398.5

Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCAGATCCAGGAGTGGGGAGTGGTCAAACCCAAGCAAACGGGCATaGTTGAAAGGGAATCTGAAATCTAAGGTTAAGTCAGCCGCGGCG +
Preference number: 1 (lower is better)
Translates to: SRSRSGEWSNPSKRA*LKGNLKSKVKSAAA
Trigger: CGCCGCGGCTGACTTAACCTTAGATTTCAGATTCCCTTTCAATCATGCCCGTTTGCTTGGGTTTGACCACTCCCCACTCCTGGATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR TCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGGAGGTTGCAGTGAGCTaGGATCACGCCACGACACTC +
Preference number: 2 (lower is better)
Translates to: SENLLSLRVSPITNSSSTEVAVS*DHATTL
Trigger: GAGTGTCGTGGCGTGATCTCAGCTCACTGCAACCTC...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR TCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCGGCACGAGAATCACTTaGACCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPGTRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGTGATTCTCGTGCC...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR CCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCGTCCAGATCCAGGAGTaGGGAGTGGTCAAACCCAAG +
Preference number: 2 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCVQIQE*GVVKPK
Trigger: CTTGGGTTTGACCACTCCCCACTCCTGGATCTGGAC...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR CCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTTCCAGGAGTGGGGAGTaGTCAAACCCAAGCAAACGG +
Preference number: 2 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFSRSGE*SNPSKR
Trigger: CCGTTTGCTTGGGTTTGACCACTCCCCACTCCTGGA...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR CCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGGTCCAGATCCAGGAGTaGGGAGTGGTCAAACCCAAG +
Preference number: 2 (lower is better)
Translates to: SENLLSLRVSPITNSSSTVQIQE*GVVKPK
Trigger: CTTGGGTTTGACCACTCCCCACTCCTGGATCTGGAC...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR CCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTCCAGGAGTGGGGAGTaGTCAAACCCAAGCAAACGG +
Preference number: 2 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPSRSGE*SNPSKR
Trigger: CCGTTTGCTTGGGTTTGACCACTCCCCACTCCTGGA...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR TCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAGGTTGCAGTGAGCTaGGATCACGCCACGACACTC +
Preference number: 2 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLEVAVS*DHATTL
Trigger: GAGTGTCGTGGCGTGATCTCAGCTCACTGCAACCTC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR TCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCGAGGTTGCAGTGAGCTaGGATCACGCCACGACACTC +
Preference number: 2 (lower is better)
Translates to: KELISSDDHSVTLYSLHGEVAVS*DHATTL
Trigger: GAGTGTCGTGGCGTGATCTCAGCTCACTGCAACCTC...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR TCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGAGGTTGCAGTGAGCTaGGATCACGCCACGACACTC +
Preference number: 2 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCEVAVS*DHATTL
Trigger: GAGTGTCGTGGCGTGATCTCAGCTCACTGCAACCTC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR TCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGCCAAGCAAACGGGCATaGTTGAAAGGGAATCTGAAA +
Preference number: 2 (lower is better)
Translates to: SENLLSLRVSPITNSSSTPSKRA*LKGNLK
Trigger: TTTCAGATTCCCTTTCAATCATGCCCGTTTGCTTGG...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR GCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTAATGCTCCCAGGGTCTaGAATGTAGCAATATGCCAA +
Preference number: 2 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFNAPRV*NVAICQ
Trigger: TTGGCATATTGCTACATTGCAGACCCTGGGAGCATT...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR CCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTTCCAGGAGTGGGGAGTaGTCAAACCCAAGCAAACGG +
Preference number: 2 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCSRSGE*SNPSKR
Trigger: CCGTTTGCTTGGGTTTGACCACTCCCCACTCCTGGA...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCGCATCTCTGAGCAAATaGACAGGCTCCAGTCAATGT +
Preference number: 2 (lower is better)
Translates to: KELISSDDHSVTLYSLHGASLSK*TGSSQC
Trigger: ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGC...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR TCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTACCAAGCAAACGGGCATaGTTGAAAGGGAATCTGAAA +
Preference number: 2 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLPSKRA*LKGNLK
Trigger: TTTCAGATTCCCTTTCAATCATGCCCGTTTGCTTGG...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCAATGCTCCCAGGGTCTaGAATGTAGCAATATGCCAA +
Preference number: 2 (lower is better)
Translates to: KELISSDDHSVTLYSLHGNAPRV*NVAICQ
Trigger: TTGGCATATTGCTACATTGCAGACCCTGGGAGCATT...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR GCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTAATGCTCCCAGGGTCTaGAATGTAGCAATATGCCAA +
Preference number: 2 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCNAPRV*NVAICQ
Trigger: TTGGCATATTGCTACATTGCAGACCCTGGGAGCATT...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR GCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAAATGCTCCCAGGGTCTaGAATGTAGCAATATGCCAA +
Preference number: 2 (lower is better)
Translates to: RLFLVLILNYLKNPEVLENAPRV*NVAICQ
Trigger: TTGGCATATTGCTACATTGCAGACCCTGGGAGCATT...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR CAA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCAGGCACGAGAATCACTaGAACCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCRHENH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGTGATTCTCGTGCCT...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR-3UTR CAA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTAGGCACGAGAATCACTaGAACCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCRHENH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGTGATTCTCGTGCCT...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
3UTR TCA 72 bp AGGAGTGGGGAGTGGTCAAACCCAAGCAAACGGGCATaGTTGAAAGGGAATCTGAAATCTAAGGTTAAGTCA +
Preference number: 3 (lower is better)
Translates to: RSGEWSNPSKRA*LKGNLKSKVKS
Trigger: TGACTTAACCTTAGATTTCAGATTCCCTTTCAATCATGCCCGTTTGCTTGGGTTTGACCACTCCCCACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCCGCGCAGCCAACCCTTaGCAAGCGCGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCRAANP*QARRDT
Trigger: CGTGTCCCGCCGCGCTTGCCAAGGGTTGGCTGCGCG...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGCGCGCAGCCAACCCTTaGCAAGCGCGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTRAANP*QARRDT
Trigger: CGTGTCCCGCCGCGCTTGCCAAGGGTTGGCTGCGCG...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCCGCGCAGCCAACCCTTaGCAAGCGCGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPRAANP*QARRDT
Trigger: CGTGTCCCGCCGCGCTTGCCAAGGGTTGGCTGCGCG...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCGGCCAGCGGATGGCCTaGTTTGCTGCGGCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCGQRMA*FAAAGK
Trigger: TTTCCCCGCCGCAGCAAACCAGGCCATCCGCTGGCC...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCGCGGATGGCCTGGTTTaGTGCGGCGGGGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCADGLV*CGGETV
Trigger: GACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGC...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTGGCCGTACACGACCTTaGGCAGTCACCGTCGGGTCC +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFGRTRP*AVTVGS
Trigger: GGACCCGACGGTGACTGCGCAAGGTCGTGTACGGCC...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR CCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGGGCCAGCGGATGGCCTaGTTTGCTGCGGCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTGQRMA*FAAAGK
Trigger: TTTCCCCGCCGCAGCAAACCAGGCCATCCGCTGGCC...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCGCGGATGGCCTGGTTTaGTGCGGCGGGGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAADGLV*CGGETV
Trigger: GACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGC...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTGGCACGAGAATCACTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFGTRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGTGATTCTCGTGCC...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCGCGGATGGCCTGGTTTaGTGCGGCGGGGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPADGLV*CGGETV
Trigger: GACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGC...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTCGCGCAGCCAACCCTTaGCAAGCGCGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCRAANP*QARRDT
Trigger: CGTGTCCCGCCGCGCTTGCCAAGGGTTGGCTGCGCG...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGGCACAGGCCCACGCTaGGCCGTACACGACCTTGCG +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLGTGPR*AVHDLA
Trigger: CGCAAGGTCGTGTACGGCCCAGCGTGGGCCTGTGCC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR TCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCGAGGTTGCAGTGAGCTaGGATCACGCCACGACACTC +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAEVAVS*DHATTL
Trigger: GAGTGTCGTGGCGTGATCTCAGCTCACTGCAACCTC...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTCCACAGGTACAGCTTaGTGCAGGACAAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCSTGTA*CRTKGS
Trigger: CGAGCCCTTTGTCCTGCAGCAAGCTGTACCTGTGGA...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGCACCGACAAGGGTCCTaGTTGCACTCTCTGCTCACC +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTHRQGS*LHSLLT
Trigger: GGTGAGCAGAGAGTGCAAGCAGGACCCTTGTCGGTG...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR CCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTCAGTCCGGCACGGGCTaGGTTCACCACAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFQSGTG*VHHSNN
Trigger: ATTGTTGCTGTGGTGAACCCAGCCCGTGCCGGACTG...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGCAGTCCGGCACGGGCTaGGTTCACCACAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTQSGTG*VHHSNN
Trigger: ATTGTTGCTGTGGTGAACCCAGCCCGTGCCGGACTG...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTCCTGGAAGTAAAGTaGGGTCAAGCCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCFLEVK*GQATGC
Trigger: GCAGCCTGTGGCTTGACCTCACTTTACTTCCAGGAA...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTACCCGAGATGTATGCTaGGCCAGAGAGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFTRDVC*ARERPI
Trigger: GATTGGCCTCTCTCTGGCTCAGCATACATCTCGGGT...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCGAGGTTGCAGTGAGCTaGGATCACGCCACGACACTC +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPEVAVS*DHATTL
Trigger: GAGTGTCGTGGCGTGATCTCAGCTCACTGCAACCTC...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTACCCCTCCCTACTTTaGTGGGGGAACCTTCTATGG +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCYPSLL*WGNLLW
Trigger: CCATAGAAGGTTCCCCCAGCAAAGTAGGGAGGGGTA...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCACAGTCACTTCCTGGTaGGCAAGGCGCCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPTVTSW*ARRLYS
Trigger: GGAGTAGAGGCGCCTTGCGCACCAGGAAGTGACTGT...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGCGGATGGCCTGGTTTaGTGCGGCGGGGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLADGLV*CGGETV
Trigger: GACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCACAGGTACAGCTTGCTaGAGGACAAAGGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSATGTAC*RTKGSP
Trigger: AGGCGAGCCCTTTGTCCTGCAGCAAGCTGTACCTGT...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTCCTGCTTGCACTCTCTaGTCACCCTTCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFPACTL*SPFLQL
Trigger: CAGCTGAAGGAAGGGTGAGCAGAGAGTGCAAGCAGG...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR CCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCGAAACAGTCACTTCCTaGTGCGCAAGGCGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAETVTS*CARRLY
Trigger: GTAGAGGCGCCTTGCGCACCAGGAAGTGACTGTTTC...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGGCCAGCGGATGGCCTaGTTTGCTGCGGCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCGQRMA*FAAAGK
Trigger: TTTCCCCGCCGCAGCAAACCAGGCCATCCGCTGGCC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCGAAGCAGTCCTGGTTTaGAGAAGAGACCCACCATGG +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCEAVLV*RRDPPW
Trigger: CCATGGTGGGTCTCTTCTCCAAACCAGGACTGCTTC...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCCAGTCCGGCACGGGCTaGGTTCACCACAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPQSGTG*VHHSNN
Trigger: ATTGTTGCTGTGGTGAACCCAGCCCGTGCCGGACTG...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCTCCAGGAGTGGGGAGTaGTCAAACCCAAGCAAACGG +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSASRSGE*SNPSKR
Trigger: CCGTTTGCTTGGGTTTGACCACTCCCCACTCCTGGA...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTGTCCAGATCCAGGAGTaGGGAGTGGTCAAACCCAAG +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFVQIQE*GVVKPK
Trigger: CTTGGGTTTGACCACTCCCCACTCCTGGATCTGGAC...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGCACCCTTCCTTCAGCTaGACCGGCTCCAGACACTAT +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTHPSFS*TGSRHY
Trigger: ATAGTGTCTGGAGCCGGTCCAGCTGAAGGAAGGGTG...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR TCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTATTGGTGCGGACTGTaGGCTCACGCCAGTATCCAC +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPYWCGL*AHASIH
Trigger: GTGGATACTGGCGTGAGCTCACAGTCCGCACCAATA...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGTTCCTGGAAGTAAAGTaGGGTCAAGCCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTFLEVK*GQATGC
Trigger: GCAGCCTGTGGCTTGACCTCACTTTACTTCCAGGAA...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCACCCGAGATGTATGCTaGGCCAGAGAGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPTRDVC*ARERPI
Trigger: GATTGGCCTCTCTCTGGCTCAGCATACATCTCGGGT...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCGCGTGTGGATGGCCCTaGAGTTTCGAATGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAACGWP*SFEWLE
Trigger: TTCAAGCCATTCGAAACTTCAGGGCCATCCACACGC...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTCACAATGTGGGGTGTaGGGGAACAAATCCACAGGT +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCSQCGV*GNKSTG
Trigger: ACCTGTGGATTTGTTCCCTCACACCCCACATTGTGA...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTATCCAAAGAACACACTaGAATCCACCTGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFIQRTH*NPPAQG
Trigger: GCCCTGCGCAGGTGGATTTCAGTGTGTTCTTTGGAT...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR TCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCATCCAAAGAACACACTaGAATCCACCTGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAIQRTH*NPPAQG
Trigger: GCCCTGCGCAGGTGGATTTCAGTGTGTTCTTTGGAT...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR GCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCGGTCAAGCCACAGGCTaGTCCAGGACCTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPGQATG*SRTSDE
Trigger: TTCATCAGAGGTCCTGGAGCAGCCTGTGGCTTGACC...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCAGCTGGGATTACAGGTaGCCACCACCAGGGAAAACT +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSASWDYR*PPPGKT
Trigger: AGTTTTCCCTGGTGGTGGGCACCTGTAATCCCAGCT...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGTGTCGTGTCCCGAATaGAGCCCACAGGCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLVSCPE*SPQAVR
Trigger: CCTGACTGCCTGTGGGCTGCATTCGGGACACGACAC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR CCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTGCTCAACCTCCAGAGTaGTGTCACAACATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFAQPPE*CHNISQ
Trigger: CTGGCTGATGTTGTGACACCACTCTGGAGGTTGAGC...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCAGAGCCTCTCAGATTTaGGTACAGCCGTTGTCACAC +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCRASQI*VQPLSH
Trigger: GTGTGACAACGGCTGTACCCAAATCTGAGAGGCTCT...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000545398.5
CDS-3UTR CCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCCTTCTTAGCAGGGTCTaGAGGACAGCACAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCLLSRV*RTAQLN
Trigger: ATTGAGCTGTGCTGTCCTCCAGACCCTGCTAAGAAG...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCCACCAGCTCACAATGTaGGGTGTGAGGGAACAAATC +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCHQLTM*GVREQI
Trigger: GATTTGTTCCCTCACACCCCACATTGTGAGCTGGTG...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCCACCCTTCCTTCAGCTaGACCGGCTCCAGACACTAT +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPHPSFS*TGSRHY
Trigger: ATAGTGTCTGGAGCCGGTCCAGCTGAAGGAAGGGTG...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR TCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCCAGTATCCACCTTCATaGAATACAAGGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAQYPPS*NTRQGS
Trigger: GGAGCCCTGCCTTGTATTTCATGAAGGTGGATACTG...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTCAGTATCCACCTTCATaGAATACAAGGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFQYPPS*NTRQGS
Trigger: GGAGCCCTGCCTTGTATTTCATGAAGGTGGATACTG...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTACATGGAGCTCCTCCTaGCTTAATTTCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFTWSSS*LNFWGW
Trigger: CCATCCCCAGAAATTAAGTCAGGAGGAGCTCCATGT...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGACATGGAGCTCCTCCTaGCTTAATTTCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTTWSSS*LNFWGW
Trigger: CCATCCCCAGAAATTAAGTCAGGAGGAGCTCCATGT...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGTCACAATGTGGGGTGTaGGGGAACAAATCCACAGGT +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTSQCGV*GNKSTG
Trigger: ACCTGTGGATTTGTTCCCTCACACCCCACATTGTGA...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAGGCACGAGAATCACTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEGTRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGTGATTCTCGTGCC...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAACAGTCACTTCCTGGTaGGCAAGGCGCCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLTVTSW*ARRLYS
Trigger: GGAGTAGAGGCGCCTTGCGCACCAGGAAGTGACTGT...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTGAGACTGCTGATGGCTaGAACGGGTCATGGTACTTT +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFETADG*NGSWYF
Trigger: AAAGTACCATGACCCGTTGCAGCCATCAGCAGTCTC...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCCACCGACAAGGGTCCTaGTTGCACTCTCTGCTCACC +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGHRQGS*LHSLLT
Trigger: GGTGAGCAGAGAGTGCAAGCAGGACCCTTGTCGGTG...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR CCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCAGAGCCTCTCAGATTTaGGTACAGCCGTTGTCACAC +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSARASQI*VQPLSH
Trigger: GTGTGACAACGGCTGTACCCAAATCTGAGAGGCTCT...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000545398.5
CDS-3UTR CCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTACAGTCCGGCACGGGCTaGGTTCACCACAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLQSGTG*VHHSNN
Trigger: ATTGTTGCTGTGGTGAACCCAGCCCGTGCCGGACTG...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTCACCAGCTCACAATGTaGGGTGTGAGGGAACAAATC +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFHQLTM*GVREQI
Trigger: GATTTGTTCCCTCACACCCCACATTGTGAGCTGGTG...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTATCCAAAGAACACACTaGAATCCACCTTGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFIQRTH*NPPCAV
Trigger: GACTGCGCAAGGTGGATTTCAGTGTGTTCTTTGGAT...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372935.5
CDS-3UTR TCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTATATTGGTGCGGACTGTaGGCTCACGCCAGTATCCAC +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLYWCGL*AHASIH
Trigger: GTGGATACTGGCGTGAGCTCACAGTCCGCACCAATA...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAACCCGAGATGTATGCTaGGCCAGAGAGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLTRDVC*ARERPI
Trigger: GATTGGCCTCTCTCTGGCTCAGCATACATCTCGGGT...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCACCCGAGATGTATGCTaGGCCAGAGAGAGGCCAATC +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGTRDVC*ARERPI
Trigger: GATTGGCCTCTCTCTGGCTCAGCATACATCTCGGGT...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCCCAAGCAAACGGGCATaGTTGAAAGGGAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCPSKRA*LKGNLK
Trigger: TTTCAGATTCCCTTTCAATCATGCCCGTTTGCTTGG...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGGTCAAGCCACAGGCTaGTCCAGGACCTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLGQATG*SRTSDE
Trigger: TTCATCAGAGGTCCTGGAGCAGCCTGTGGCTTGACC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCGGTCAAGCCACAGGCTaGTCCAGGACCTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGGQATG*SRTSDE
Trigger: TTCATCAGAGGTCCTGGAGCAGCCTGTGGCTTGACC...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTCTTGCATCCTCCACTaGCTGCTCCAACAATTCAAT +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCSCILH*LLQQFN
Trigger: ATTGAATTGTTGGAGCAGGCAGTGGAGGATGCAAGA...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCACAGGTACAGCTTGCTaGAGGACAAAGGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGTGTAC*RTKGSP
Trigger: AGGCGAGCCCTTTGTCCTGCAGCAAGCTGTACCTGT...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTCCACAGGTACAGCTTaGTGCAGGACAAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGSTGTA*CRTKGS
Trigger: CGAGCCCTTTGTCCTGCAGCAAGCTGTACCTGTGGA...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTGCATCTCTGAGCAAATaGACAGGCTCCAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFASLSK*TGSSQC
Trigger: ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGC...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCCCTGCTTGCACTCTCTaGTCACCCTTCCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGPACTL*SPFLQL
Trigger: CAGCTGAAGGAAGGGTGAGCAGAGAGTGCAAGCAGG...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCACACTGAAATCCACCTaGGCAGGGCCAAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGTLKST*AGPRIP
Trigger: AGGGATCCTTGGCCCTGCGCAGGTGGATTTCAGTGT...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR GCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCGATTTTGGAGCTTTTTaGCTCCACACTACACAGCAC +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCDFGAF*LHTTQH
Trigger: GTGCTGTGTAGTGTGGAGGCAAAAAGCTCCAAAATC...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCGGCTGCAACGGGTCATaGTACTTTCCTGGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAGCNGS*YFPGSK
Trigger: TTTACTTCCAGGAAAGTACCATGACCCGTTGCAGCC...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTCCAGGAGTGGGGAGTaGTCAAACCCAAGCAAACGG +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGSRSGE*SNPSKR
Trigger: CCGTTTGCTTGGGTTTGACCACTCCCCACTCCTGGA...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCGTCCAGATCCAGGAGTaGGGAGTGGTCAAACCCAAG +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGVQIQE*GVVKPK
Trigger: CTTGGGTTTGACCACTCCCCACTCCTGGATCTGGAC...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCGCCAAGGATCCCTTTTaGAGCAAAATGTTCACCCAC +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAAKDPF*SKMFTH
Trigger: GTGGGTGAACATTTTGCTCCAAAAGGGATCCTTGGC...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR TCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGCCCAGAAAGAGCTGTaGCCATCCTGGTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLAQKEL*PSWWIS
Trigger: AGAAATCCACCAGGATGGTCACAGCTCTTTCTGGGC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCGCCCAGAAAGAGCTGTaGCCATCCTGGTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGAQKEL*PSWWIS
Trigger: AGAAATCCACCAGGATGGTCACAGCTCTTTCTGGGC...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTTATTGGTGCGGACTGTaGGCTCACGCCAGTATCCAC +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCYWCGL*AHASIH
Trigger: GTGGATACTGGCGTGAGCTCACAGTCCGCACCAATA...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAATATTGGTGCGGACTGTaGGCTCACGCCAGTATCCAC +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEYWCGL*AHASIH
Trigger: GTGGATACTGGCGTGAGCTCACAGTCCGCACCAATA...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGCGTGTGGATGGCCCTaGAGTTTCGAATGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLACGWP*SFEWLE
Trigger: TTCAAGCCATTCGAAACTTCAGGGCCATCCACACGC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTTTCTTCCTCCACGGGTaGGAGTTAATTGGTGCTATT +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFFFLHG*ELIGAI
Trigger: AATAGCACCAATTAACTCTCACCCGTGGAGGAAGAA...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTATACCCCTCCCTACTTTaGTGGGGGAACCTTCTATGG +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLYPSLL*WGNLLW
Trigger: CCATAGAAGGTTCCCCCAGCAAAGTAGGGAGGGGTA...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGGTCAAGCCACAGGCTaGTCCAGGACCTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCGQATG*SRTSDE
Trigger: TTCATCAGAGGTCCTGGAGCAGCCTGTGGCTTGACC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTTCTTGCATCCTCCACTaGCTGCTCCAACAATTCAAT +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFSCILH*LLQQFN
Trigger: ATTGAATTGTTGGAGCAGGCAGTGGAGGATGCAAGA...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCATTCACCATGGAGCTTaGAGGAAACAAAAACTAGCG +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCIHHGA*RKQKLA
Trigger: CGCTAGTTTTTGTTTCCTGCAAGCTCCATGGTGAAT...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTACAGGTACAGCTTGCTaGAGGACAAAGGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCTGTAC*RTKGSP
Trigger: AGGCGAGCCCTTTGTCCTGCAGCAAGCTGTACCTGT...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAACAGGTACAGCTTGCTaGAGGACAAAGGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLETGTAC*RTKGSP
Trigger: AGGCGAGCCCTTTGTCCTGCAGCAAGCTGTACCTGT...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGTGTCTTCTAGGAGGCTaGTTATCGAGTAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTCLLGG*LSSKEE
Trigger: CTCCTCTTTACTCGATAAGCAGCCTCCTAGAAGACA...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGAATGCTCCCAGGGTCTaGAATGTAGCAATATGCCAA +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTNAPRV*NVAICQ
Trigger: TTGGCATATTGCTACATTGCAGACCCTGGGAGCATT...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAAGCTGGGATTACAGGTaGCCACCACCAGGGAAAACT +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLSWDYR*PPPGKT
Trigger: AGTTTTCCCTGGTGGTGGGCACCTGTAATCCCAGCT...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCAGCTGGGATTACAGGTaGCCACCACCAGGGAAAACT +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGSWDYR*PPPGKT
Trigger: AGTTTTCCCTGGTGGTGGGCACCTGTAATCCCAGCT...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAACACTGAAATCCACCTaGGCAGGGCCAAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLETLKST*AGPRIP
Trigger: AGGGATCCTTGGCCCTGCGCAGGTGGATTTCAGTGT...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR CCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGCCCCGCGGACAGTTTaGCATAGTAGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLAPRTV*HSREFS
Trigger: AGAAAACTCCCTACTATGCCAAACTGTCCGCGGGGC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
CDS-3UTR CCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAGCAGTCCTGGTTTaGAGAAGAGACCCACCATGG +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLEAVLV*RRDPPW
Trigger: CCATGGTGGGTCTCTTCTCCAAACCAGGACTGCTTC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGCTCAACCTCCAGAGTaGTGTCACAACATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLAQPPE*CHNISQ
Trigger: CTGGCTGATGTTGTGACACCACTCTGGAGGTTGAGC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCACAAAAACTAGCGTGTaGATGGCCCTGAAGTTTCGA +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSATKTSV*MALKFR
Trigger: TCGAAACTTCAGGGCCATCCACACGCTAGTTTTTGT...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGACAAAAACTAGCGTGTaGATGGCCCTGAAGTTTCGA +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTTKTSV*MALKFR
Trigger: TCGAAACTTCAGGGCCATCCACACGCTAGTTTTTGT...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAATCCAGGAGTGGGGAGTaGTCAAACCCAAGCAAACGG +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLESRSGE*SNPSKR
Trigger: CCGTTTGCTTGGGTTTGACCACTCCCCACTCCTGGA...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAGTCCAGATCCAGGAGTaGGGAGTGGTCAAACCCAAG +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEVQIQE*GVVKPK
Trigger: CTTGGGTTTGACCACTCCCCACTCCTGGATCTGGAC...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCCAGAAAGTAAGGGAGTaGGAGGAGTTAGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGQKVRE*EELGHR
Trigger: CCTGTGCCCTAACTCCTCCCACTCCCTTACTTTCTG...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR CCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCAACCAAACAAGCAAATaGGTTGACTGCTGTGTCGTG +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSANQTSK*VDCCVV
Trigger: CACGACACAGCAGTCAACCCATTTGCTTGTTTGGTT...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR TCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAGCCCAGAAAGAGCTGTaGCCATCCTGGTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEAQKEL*PSWWIS
Trigger: AGAAATCCACCAGGATGGTCACAGCTCTTTCTGGGC...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGCCCAGAAAGAGCTGTaGCCATCCTGGTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCAQKEL*PSWWIS
Trigger: AGAAATCCACCAGGATGGTCACAGCTCTTTCTGGGC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTACAGTATCCACCTTCATaGAATACAAGGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLQYPPS*NTRQGS
Trigger: GGAGCCCTGCCTTGTATTTCATGAAGGTGGATACTG...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTTTCCTGGAAGTAAAGTaGGGTCAAGCCACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCFLEVK*GQATGC
Trigger: GCAGCCTGTGGCTTGACCTCACTTTACTTCCAGGAA...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAGCGTGTGGATGGCCCTaGAGTTTCGAATGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEACGWP*SFEWLE
Trigger: TTCAAGCCATTCGAAACTTCAGGGCCATCCACACGC...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAAACAAGCAAATGGGTTaGCTGCTGTGTCGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLENKQMG*LLCRVP
Trigger: CGGGACACGACACAGCAGTCAACCCATTTGCTTGTT...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR TCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGATCCAAAGAACACACTaGAATCCACCTTCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTIQRTH*NPPSFV
Trigger: TACGAAGGAAGGTGGATTTCAGTGTGTTCTTTGGAT...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545398.5
CDS-3UTR GCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAATACCCCTCCCTACTTTaGTGGGGGAACCTTCTATGG +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEYPSLL*WGNLLW
Trigger: CCATAGAAGGTTCCCCCAGCAAAGTAGGGAGGGGTA...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCGAGACTGCTGATGGCTaGAACGGGTCATGGTACTTT +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGETADG*NGSWYF
Trigger: AAAGTACCATGACCCGTTGCAGCCATCAGCAGTCTC...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTATTCACCATGGAGCTTaGAGGAAACAAAAACTAGCG +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFIHHGA*RKQKLA
Trigger: CGCTAGTTTTTGTTTCCTGCAAGCTCCATGGTGAAT...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGTCTTCTAGGAGGCTaGTTATCGAGTAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPCLLGG*LSSKEE
Trigger: CTCCTCTTTACTCGATAAGCAGCCTCCTAGAAGACA...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCAATGCTCCCAGGGTCTaGAATGTAGCAATATGCCAA +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPNAPRV*NVAICQ
Trigger: TTGGCATATTGCTACATTGCAGACCCTGGGAGCATT...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAAGCAAATGGGTTGACTaGTGTGTCGTGTCCCGAATG +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLSKWVD*CVVSRM
Trigger: CATTCGGGACACGACACAGCAGTCAACCCATTTGCT...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR GCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCGATTTTGGAGCTTTTTaGCTCCACACTACACAGCAC +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPDFGAF*LHTTQH
Trigger: GTGCTGTGTAGTGTGGAGGCAAAAAGCTCCAAAATC...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAGCCCCGCGGACAGTTTaGCATAGTAGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEAPRTV*HSREFS
Trigger: AGAAAACTCCCTACTATGCCAAACTGTCCGCGGGGC...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
CDS-3UTR CCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGCCCCGCGGACAGTTTaGCATAGTAGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCAPRTV*HSREFS
Trigger: AGAAAACTCCCTACTATGCCAAACTGTCCGCGGGGC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
CDS-3UTR CCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGAAGCAGTCCTGGTTTaGAGAAGAGACCCACCATGG +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCEAVLV*RRDPPW
Trigger: CCATGGTGGGTCTCTTCTCCAAACCAGGACTGCTTC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAGAAGCAGTCCTGGTTTaGAGAAGAGACCCACCATGG +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEEAVLV*RRDPPW
Trigger: CCATGGTGGGTCTCTTCTCCAAACCAGGACTGCTTC...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCACAAAAACTAGCGTGTaGATGGCCCTGAAGTTTCGA +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPTKTSV*MALKFR
Trigger: TCGAAACTTCAGGGCCATCCACACGCTAGTTTTTGT...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCCTTCTTAGCAGGGTCTaGAGGACAGCACAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGLLSRV*RTAQLN
Trigger: ATTGAGCTGTGCTGTCCTCCAGACCCTGCTAAGAAG...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAACAGTATCCACCTTCATaGAATACAAGGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEQYPPS*NTRQGS
Trigger: GGAGCCCTGCCTTGTATTTCATGAAGGTGGATACTG...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTACATGGAGCTCCTCCTaGCTTAATTTCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCTWSSS*LNFWGW
Trigger: CCATCCCCAGAAATTAAGTCAGGAGGAGCTCCATGT...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTTCACAATGTGGGGTGTaGGGGAACAAATCCACAGGT +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCSQCGV*GNKSTG
Trigger: ACCTGTGGATTTGTTCCCTCACACCCCACATTGTGA...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCAATTTTCTTCTGAGCTaGAAATTTCACCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCNFLLS*KFHLEL
Trigger: CAGCTCAAGGTGAAATTTGCAGCTCAGAAGAAAATT...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000545398.5
CDS-3UTR GCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGAGACTGCTGATGGCTaGAACGGGTCATGGTACTTT +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCETADG*NGSWYF
Trigger: AAAGTACCATGACCCGTTGCAGCCATCAGCAGTCTC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGCATCTCTGAGCAAATaGACAGGCTCCAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLASLSK*TGSSQC
Trigger: ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAAGAGCCTCTCAGATTTaGGTACAGCCGTTGTCACAC +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLERASQI*VQPLSH
Trigger: GTGTGACAACGGCTGTACCCAAATCTGAGAGGCTCT...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000545398.5
CDS-3UTR CCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGGCTGCAACGGGTCATaGTACTTTCCTGGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLGCNGS*YFPGSK
Trigger: TTTACTTCCAGGAAAGTACCATGACCCGTTGCAGCC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAACACCAGCTCACAATGTaGGGTGTGAGGGAACAAATC +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEHQLTM*GVREQI
Trigger: GATTTGTTCCCTCACACCCCACATTGTGAGCTGGTG...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCCCTGTATTCACTTCATaGCTTACCCTGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCPVFTS*LTLLLK
Trigger: TTTTAAAAGCAGGGTAAGCCATGAAGTGAATACAGG...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTGTTATACTAGATTTTaGAGCTTTTTGCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCCYTRF*SFLPPH
Trigger: GTGTGGAGGCAAAAAGCTCCAAAATCTAGTATAACA...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCAATTTTCTTCTGAGCTaGAAATTTCACCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSANFLLS*KFHLEL
Trigger: CAGCTCAAGGTGAAATTTGCAGCTCAGAAGAAAATT...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000545398.5
CDS-3UTR GCA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGAATTTTCTTCTGAGCTaGAAATTTCACCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SENLLSLRVSPITNSSSTNFLLS*KFHLEL
Trigger: CAGCTCAAGGTGAAATTTGCAGCTCAGAAGAAAATT...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000545398.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTCTTGCATCCTCCACTaGCTGCTCCAACAATTCAAT +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGSCILH*LLQQFN
Trigger: ATTGAATTGTTGGAGCAGGCAGTGGAGGATGCAAGA...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTTGGCAAAATCTTCTCTaGTTGACCAGTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFWQNLL*LTSMKF
Trigger: GAATTTCATACTGGTCAAGCAGAGAAGATTTTGCCA...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAAATGCTCCCAGGGTCTaGAATGTAGCAATATGCCAA +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLNAPRV*NVAICQ
Trigger: TTGGCATATTGCTACATTGCAGACCCTGGGAGCATT...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAGCATCTCTGAGCAAATaGACAGGCTCCAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEASLSK*TGSSQC
Trigger: ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGC...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAGGCTGCAACGGGTCATaGTACTTTCCTGGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEGCNGS*YFPGSK
Trigger: TTTACTTCCAGGAAAGTACCATGACCCGTTGCAGCC...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGGCTGCAACGGGTCATaGTACTTTCCTGGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCGCNGS*YFPGSK
Trigger: TTTACTTCCAGGAAAGTACCATGACCCGTTGCAGCC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCCCTGTATTCACTTCATaGCTTACCCTGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAPVFTS*LTLLLK
Trigger: TTTTAAAAGCAGGGTAAGCCATGAAGTGAATACAGG...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGCCAAGGATCCCTTTTaGAGCAAAATGTTCACCCAC +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCAKDPF*SKMFTH
Trigger: GTGGGTGAACATTTTGCTCCAAAAGGGATCCTTGGC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR TCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTCCAAGCAAACGGGCATaGTTGAAAGGGAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCPSKRA*LKGNLK
Trigger: TTTCAGATTCCCTTTCAATCATGCCCGTTTGCTTGG...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTTTCTTCCTCCACGGGTaGGAGTTAATTGGTGCTATT +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCFFLHG*ELIGAI
Trigger: AATAGCACCAATTAACTCTCACCCGTGGAGGAAGAA...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAATTCTTCCTCCACGGGTaGGAGTTAATTGGTGCTATT +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEFFLHG*ELIGAI
Trigger: AATAGCACCAATTAACTCTCACCCGTGGAGGAAGAA...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCATTCACCATGGAGCTTaGAGGAAACAAAAACTAGCG +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGIHHGA*RKQKLA
Trigger: CGCTAGTTTTTGTTTCCTGCAAGCTCCATGGTGAAT...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTTGTCTTCTAGGAGGCTaGTTATCGAGTAAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCCLLGG*LSSKEE
Trigger: CTCCTCTTTACTCGATAAGCAGCCTCCTAGAAGACA...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAGATTTTGGAGCTTTTTaGCTCCACACTACACAGCAC +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEDFGAF*LHTTQH
Trigger: GTGCTGTGTAGTGTGGAGGCAAAAAGCTCCAAAATC...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTACAAAAACTAGCGTGTaGATGGCCCTGAAGTTTCGA +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCTKTSV*MALKFR
Trigger: TCGAAACTTCAGGGCCATCCACACGCTAGTTTTTGT...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCCCTGTATTCACTTCATaGCTTACCCTGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPPVFTS*LTLLLK
Trigger: TTTTAAAAGCAGGGTAAGCCATGAAGTGAATACAGG...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR TCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTCTGCAAATTTCACCTTaGGCTGTTCTTCATAGCTCA +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCLQISP*AVLHSS
Trigger: TGAGCTATGAAGAACAGCTCAAGGTGAAATTTGCAG...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000545398.5
CDS-3UTR TCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAACTGCAAATTTCACCTTaGGCTGTTCTTCATAGCTCA +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLELQISP*AVLHSS
Trigger: TGAGCTATGAAGAACAGCTCAAGGTGAAATTTGCAG...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000545398.5
CDS-3UTR GCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTGGCAAAATCTTCTCTaGTTGACCAGTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGWQNLL*LTSMKF
Trigger: GAATTTCATACTGGTCAAGCAGAGAAGATTTTGCCA...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTATGTTATACTAGATTTTaGAGCTTTTTGCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLCYTRF*SFLPPH
Trigger: GTGTGGAGGCAAAAAGCTCCAAAATCTAGTATAACA...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTGTTATACTAGATTTTaGAGCTTTTTGCCTCCACAC +
Preference number: 4 (lower is better)
Translates to: KELISSDDHSVTLYSLHGCYTRF*SFLPPH
Trigger: GTGTGGAGGCAAAAAGCTCCAAAATCTAGTATAACA...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTTGGCAAAATCTTCTCTaGTTGACCAGTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCWQNLL*LTSMKF
Trigger: GAATTTCATACTGGTCAAGCAGAGAAGATTTTGCCA...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR GCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAATGGCAAAATCTTCTCTaGTTGACCAGTATGAAATTC +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEWQNLL*LTSMKF
Trigger: GAATTTCATACTGGTCAAGCAGAGAAGATTTTGCCA...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CCA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAACCTGTATTCACTTCATaGCTTACCCTGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEPVFTS*LTLLLK
Trigger: TTTTAAAAGCAGGGTAAGCCATGAAGTGAATACAGG...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS GCA 90 bp GCGGATGGCCTGGTTTGCTGCGGCGGGGAAACAGTCACTTCCTGGTaGGCAAGGCGCCTCTACTCCCGCCGCACGCGCAGCCAACCCTTG +
Preference number: 5 (lower is better)
Translates to: ADGLVCCGGETVTSW*ARRLYSRRTRSQPL
Trigger: CAAGGGTTGGCTGCGCGTGCGGCGGGAGTAGAGGCGCCTTGCGCACCAGGAAGTGACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000478422.1
ENST00000545398.5
CDS GCA 90 bp AACCTGAGGCGGCAAACTAAAAGGCCAGCGGATGGCCTGGTTTGCTaGGGCGGGGAAACAGTCACTTCCTGGTGCGCAAGGCGCCTCTAC +
Preference number: 5 (lower is better)
Translates to: NLRRQTKRPADGLVC*GGETVTSWCARRLY
Trigger: GTAGAGGCGCCTTGCGCACCAGGAAGTGACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGCTGGCCTTTTAGTTTGCCGCCTCAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478422.1
ENST00000545398.5
CDS GCA 90 bp ACAAACCTGAGGCGGCAAACTAAAAGGCCAGCGGATGGCCTGGTTTaGTGCGGCGGGGAAACAGTCACTTCCTGGTGCGCAAGGCGCCTC +
Preference number: 5 (lower is better)
Translates to: TNLRRQTKRPADGLV*CGGETVTSWCARRL
Trigger: GAGGCGCCTTGCGCACCAGGAAGTGACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGCTGGCCTTTTAGTTTGCCGCCTCAGGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478422.1
ENST00000545398.5
CDS GCA 90 bp TTTCTGAGGCGGCAAACTAAAAGGCCAGCGGATGGCCTGGTTTGCTaGGGCGGGGAAACAGTCACTTCCTGGTGCGCAAGGCGCCTCTAC +
Preference number: 5 (lower is better)
Translates to: FLRRQTKRPADGLVC*GGETVTSWCARRLY
Trigger: GTAGAGGCGCCTTGCGCACCAGGAAGTGACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGCTGGCCTTTTAGTTTGCCGCCTCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
CDS GCA 90 bp AAGGATCCCTTTTGGAGCAAAATGTTCACCCACCGACAAGGGTCCTaGTTGCACTCTCTGCTCACCCTTCCTTCAGCTGGACCGGCTCCA +
Preference number: 5 (lower is better)
Translates to: KDPFWSKMFTHRQGS*LHSLLTLPSAGPAP
Trigger: TGGAGCCGGTCCAGCTGAAGGAAGGGTGAGCAGAGAGTGCAAGCAGGACCCTTGTCGGTGGGTGAACATTTTGCTCCAAAAGGGATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS-3UTR CAA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTGGGCCGTACACGACCTaGCGCAGTCACCGTCGGGTC +
Preference number: 5 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFGPYTT*RSHRRV
Trigger: GACCCGACGGTGACTGCGCAAGGTCGTGTACGGCCC...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS TCA 90 bp GCTGCTTATCGAGTAAAGAGGAGCACCAGCTCACAATGTGGGGTGTaGGGGAACAAATCCACAGGTACAGCTTGCTGCAGGACAAAGGGC +
Preference number: 5 (lower is better)
Translates to: AAYRVKRSTSSQCGV*GNKSTGTACCRTKG
Trigger: GCCCTTTGTCCTGCAGCAAGCTGTACCTGTGGATTTGTTCCCTCACACCCCACATTGTGAGCTGGTGCTCCTCTTTACTCGATAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS TCA 90 bp CGGCTCCAGACACTATTCCTTGCTAAACCAAACAAGCAAATGGGTTaGCTGCTGTGTCGTGTCCCGAATGCAGCCCACAGGCAGTCAGGT +
Preference number: 5 (lower is better)
Translates to: RLQTLFLAKPNKQMG*LLCRVPNAAHRQSG
Trigger: ACCTGACTGCCTGTGGGCTGCATTCGGGACACGACACAGCAGTCAACCCATTTGCTTGTTTGGTTTAGCAAGGAATAGTGTCTGGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR CAA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCAGCGGATGGCCTGGTTaGCTGCGGCGGGGAAACAGT +
Preference number: 5 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCSGWPG*LRRGNS
Trigger: ACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGCT...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAACGCGCAGCCAACCCTaGGCAAGCGCGGCGGGACAC +
Preference number: 5 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLTRSQP*ASAAGH
Trigger: GTGTCCCGCCGCGCTTGCCAAGGGTTGGCTGCGCGT...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS GCA 90 bp TCCAGACACTATTCCTTGCTAAACCAAACAAGCAAATGGGTTGACTaGTGTGTCGTGTCCCGAATGCAGCCCACAGGCAGTCAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: SRHYSLLNQTSKWVD*CVVSRMQPTGSQVL
Trigger: AAGGACCTGACTGCCTGTGGGCTGCATTCGGGACACGACACAGCAGTCAACCCATTTGCTTGTTTGGTTTAGCAAGGAATAGTGTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR CAA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCAGCGGATGGCCTGGTTaGCTGCGGCGGGGAAACAGT +
Preference number: 5 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPSGWPG*LRRGNS
Trigger: ACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGCT...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCACACTGAAATCCACCTaGCGCAGTCACCGTCGGGTC +
Preference number: 5 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCTLKST*RSHRRV
Trigger: GACCCGACGGTGACTGCGCAAGGTGGATTTCAGTGT...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372935.5
CDS-3UTR CAA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCAGGCACGAGAATCACTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: QGLQCSNMPNLKVSETSARHENH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGTGATTCTCGTGCCT...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCGTACCCCTCCCTACTTaGCTGGGGGAACCTTCTATG +
Preference number: 5 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCVPLPT*LGEPSM
Trigger: CATAGAAGGTTCCCCCAGCAAAGTAGGGAGGGGTAC...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCATCCACAGGTACAGCTaGCTGCAGGACAAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCIHRYS*LQDKGL
Trigger: GAGCCCTTTGTCCTGCAGCAAGCTGTACCTGTGGAT...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCAGGCACGAGAATCACTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPRHENH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGTGATTCTCGTGCCT...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTGTACCCCTCCCTACTTaGCTGGGGGAACCTTCTATG +
Preference number: 5 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFVPLPT*LGEPSM
Trigger: CATAGAAGGTTCCCCCAGCAAAGTAGGGAGGGGTAC...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCAGCGGATGGCCTGGTTaGCTGCGGCGGGGAAACAGT +
Preference number: 5 (lower is better)
Translates to: KELISSDDHSVTLYSLHGSGWPG*LRRGNS
Trigger: ACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGCT...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTATCCACAGGTACAGCTaGCTGCAGGACAAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFIHRYS*LQDKGL
Trigger: GAGCCCTTTGTCCTGCAGCAAGCTGTACCTGTGGAT...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGATCCACAGGTACAGCTaGCTGCAGGACAAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SENLLSLRVSPITNSSSTIHRYS*LQDKGL
Trigger: GAGCCCTTTGTCCTGCAGCAAGCTGTACCTGTGGAT...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCGACACTATTCCTTGCTaGCGCAGTCACCGTCGGGTC +
Preference number: 5 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPDTIPC*RSHRRV
Trigger: GACCCGACGGTGACTGCGCAAGCAAGGAATAGTGTC...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372939.5
CDS-3UTR CAA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCGTACCCCTCCCTACTTaGCTGGGGGAACCTTCTATG +
Preference number: 5 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPVPLPT*LGEPSM
Trigger: CATAGAAGGTTCCCCCAGCAAAGTAGGGAGGGGTAC...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCGGAAGCAGTCCTGGTTaGGAGAAGAGACCCACCATG +
Preference number: 5 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPGSSPG*EKRPTM
Trigger: CATGGTGGGTCTCTTCTCCAAACCAGGACTGCTTCC...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCGAGAGCCTCTCAGATTaGGGTACAGCCGTTGTCACA +
Preference number: 5 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAESLSD*GTAVVT
Trigger: TGTGACAACGGCTGTACCCAAATCTGAGAGGCTCTC...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000545398.5
CDS-3UTR CAA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAAGGCTACCACTAAACTaGGCCGGTCTGCAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: RLFLVLILNYLKNPEVLERLPLN*AGLQGP
Trigger: CGGGCCCTGCAGACCGGCCAAGTTTAGTGGTAGCCT...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR CAA 90 bp ATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCATAGTACTGCGCCACTaGACTGTGTTTCTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: ISSDDHSVTLYSLHGLPCIVLRH*TVFLRD
Trigger: ATCCCTGAGAAACACAGTCAAGTGGCGCAGTACTAT...GCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCGAGTTGGTGATGCCATaGAAGGCTGCAGTCCATCTT +
Preference number: 5 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAELVMP*KAAVHL
Trigger: AAGATGGACTGCAGCCTTCAATGGCATCACCAACTC...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTACAGGCAGTCAGGTCCTaGTCTCCCCAACAAGACTCC +
Preference number: 5 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLQAVRS*SPQQDS
Trigger: GGAGTCTTGTTGGGGAGACAAGGACCTGACTGCCTG...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR CAA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGTACCCCTCCCTACTTaGCTGGGGGAACCTTCTATG +
Preference number: 5 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLVPLPT*LGEPSM
Trigger: CATAGAAGGTTCCCCCAGCAAAGTAGGGAGGGGTAC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTATAGTACTGCGCCACTaGACTGTGTTTCTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFIVLRH*TVFLRD
Trigger: ATCCCTGAGAAACACAGTCAAGTGGCGCAGTACTAT...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp TTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCGAGTTGGTGATGCCATaGAAGGCTGCAGTCCATCTT +
Preference number: 5 (lower is better)
Translates to: LISSDDHSVTLYSLHGLPELVMP*KAAVHL
Trigger: AAGATGGACTGCAGCCTTCAATGGCATCACCAACTC...GGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGGAAGCAGTCCTGGTTaGGAGAAGAGACCCACCATG +
Preference number: 5 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCGSSPG*EKRPTM
Trigger: CATGGTGGGTCTCTTCTCCAAACCAGGACTGCTTCC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAGAGCCTCTCAGATTaGGGTACAGCCGTTGTCACA +
Preference number: 5 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLESLSD*GTAVVT
Trigger: TGTGACAACGGCTGTACCCAAATCTGAGAGGCTCTC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000545398.5
CDS-3UTR CAA 90 bp TCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTTACCCTGCTTTTCACCACAGCAACAATaGACTGTCCATCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: SSDDHSVTLYSLHGLPCFSPQQQ*TVHLPL
Trigger: CAAAGGAAGATGGACAGTCAATTGTTGCTGTGGTGA...AAAGCAGGGTAAGCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp CGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGAAATCCACAGGTACAGCTaGCTGCAGGACAAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: RLFLVLILNYLKNPEVLEIHRYS*LQDKGL
Trigger: GAGCCCTTTGTCCTGCAGCAAGCTGTACCTGTGGAT...TTCTAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCAGATTTTGGAGCTTTTaGCCTCCACACTACACAGCA +
Preference number: 5 (lower is better)
Translates to: QGLQCSNMPNLKVSETSARFWSF*PPHYTA
Trigger: TGCTGTGTAGTGTGGAGGCAAAAAGCTCCAAAATCT...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCAAACAAGCAAATGGGTaGACTGCTGTGTCGTGTCCC +
Preference number: 5 (lower is better)
Translates to: KELISSDDHSVTLYSLHGKQANG*TAVSCP
Trigger: GGGACACGACACAGCAGTCAACCCATTTGCTTGTTT...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS-3UTR CAA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTAGGCCAAGGATCCCTTTaGGAGCAAAATGTTCACCCA +
Preference number: 5 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLGQGSL*EQNVHP
Trigger: TGGGTGAACATTTTGCTCCAAAAGGGATCCTTGGCC...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372936.4
ENST00000372939.5
CDS GCA 90 bp TGGCTAAGAAGATCAAGACAGTCCATAGAAGGGGAGTTCCAATCTTaGCATAAAGCAGGAGTCAACAAACTACTTATGTCAAGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: WLRRSRQSIEGEFQS*HKAGVNKLLMSRAK
Trigger: TTTGGCTCTTGACATAAGTAGTTTGTTGACTCCTGCTTTATGGCAAGATTGGAACTCCCCTTCTATGGACTGTCTTGATCTTCTTAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488615.1
CDS-3UTR CAA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTGAGTTGGTGATGCCATaGAAGGCTGCAGTCCATCTT +
Preference number: 5 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCELVMP*KAAVHL
Trigger: AAGATGGACTGCAGCCTTCAATGGCATCACCAACTC...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTATAGTACTGCGCCACTaGACTGTGTTTCTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCIVLRH*TVFLRD
Trigger: ATCCCTGAGAAACACAGTCAAGTGGCGCAGTACTAT...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp CAGGGTCTGCAATGTAGCAATATGCCAAACCTGAAAGTTTCTGAAACTTCAGCCCAAAATCTTCTCTGCTaGACCAGTATGAAATTCAGA +
Preference number: 5 (lower is better)
Translates to: QGLQCSNMPNLKVSETSAQNLLC*TSMKFR
Trigger: TCTGAATTTCATACTGGTCAAGCAGAGAAGATTTTG...GGCTGAAGTTTCAGAAACTTTCAGGTTTGGCATATTGCTACATTGCAGACCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp TCTGAAAATCTCCTTTCCCTTAGGGTCTCTCCAATAACCAATTCTTCCTCCACGCAAAATCTTCTCTGCTaGACCAGTATGAAATTCAGA +
Preference number: 5 (lower is better)
Translates to: SENLLSLRVSPITNSSSTQNLLC*TSMKFR
Trigger: TCTGAATTTCATACTGGTCAAGCAGAGAAGATTTTG...CGTGGAGGAAGAATTGGTTATTGGAGAGACCCTAAGGGAAAGGAGATTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp AAAGAATTAATCTCATCTGATGATCACTCAGTCACCCTGTATTCACTTCATGGCTCACCACAGCAACAATaGACTGTCCATCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: KELISSDDHSVTLYSLHGSPQQQ*TVHLPL
Trigger: CAAAGGAAGATGGACAGTCAATTGTTGCTGTGGTGA...GCCATGAAGTGAATACAGGGTGACTGAGTGATCATCAGATGAGATTAATTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTATCACCACAGCAACAATaGACTGTCCATCTTCCTTTG +
Preference number: 5 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLSPQQQ*TVHLPL
Trigger: CAAAGGAAGATGGACAGTCAATTGTTGCTGTGGTGA...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTAGATTTTGGAGCTTTTaGCCTCCACACTACACAGCA +
Preference number: 5 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCRFWSF*PPHYTA
Trigger: TGCTGTGTAGTGTGGAGGCAAAAAGCTCCAAAATCT...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp CCTCGACTGTTTCTGGTTTTAATCCTTAACTACCTCAAGAATCCAGAAGTCTTACAAAATCTTCTCTGCTaGACCAGTATGAAATTCAGA +
Preference number: 5 (lower is better)
Translates to: PRLFLVLILNYLKNPEVLQNLLC*TSMKFR
Trigger: TCTGAATTTCATACTGGTCAAGCAGAGAAGATTTTG...TAAGACTTCTGGATTCTTGAGGTAGTTAAGGATTAAAACCAGAAACAGTCGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS-3UTR CAA 90 bp AAATATCTAAAAATTGTAGCATCTCTGAGCAAATGCACAGGCTCCAGTCAATGTCAAAATCTTCTCTGCTaGACCAGTATGAAATTCAGA +
Preference number: 5 (lower is better)
Translates to: KYLKIVASLSKCTGSSQCQNLLC*TSMKFR
Trigger: TCTGAATTTCATACTGGTCAAGCAGAGAAGATTTTG...ACATTGACTGGAGCCTGTGCATTTGCTCAGAGATGCTACAATTTTTAGATATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS CCA 72 bp GGCGCCTCTACTCCCGCCGCACGCGCAGCCAACCCTTaGCAAGCGCGGCGGGACACGGGGCTCCTCCCAGCG +
Preference number: 6 (lower is better)
Translates to: GASTPAARAANP*QARRDTGLLPA
Trigger: CGCTGGGAGGAGCCCCGTGTCCCGCCGCGCTTGCCAAGGGTTGGCTGCGCGTGCGGCGGGAGTAGAGGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000478422.1
ENST00000545398.5
CDS GCA 72 bp TTAGGGCACAGGCCCACGCTGGGCCGTACACGACCTTaGGCAGTCACCGTCGGGTCCCGTCTCCAGCCCCGC +
Preference number: 6 (lower is better)
Translates to: LGHRPTLGRTRP*AVTVGSRLQPR
Trigger: GCGGGGCTGGAGACGGGACCCGACGGTGACTGCGCAAGGTCGTGTACGGCCCAGCGTGGGCCTGTGCCCTAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS CAA 72 bp GTTAGGGCACAGGCCCACGCTGGGCCGTACACGACCTaGCGCAGTCACCGTCGGGTCCCGTCTCCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: VRAQAHAGPYTT*RSHRRVPSPAP
Trigger: CGGGGCTGGAGACGGGACCCGACGGTGACTGCGCAAGGTCGTGTACGGCCCAGCGTGGGCCTGTGCCCTAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS CCA 72 bp GGCCTGGTTTGCTGCGGCGGGGAAACAGTCACTTCCTaGTGCGCAAGGCGCCTCTACTCCCGCCGCACGCGC +
Preference number: 6 (lower is better)
Translates to: GLVCCGGETVTS*CARRLYSRRTR
Trigger: GCGCGTGCGGCGGGAGTAGAGGCGCCTTGCGCACCAGGAAGTGACTGTTTCCCCGCCGCAGCAAACCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000478422.1
ENST00000545398.5
CDS GCA 72 bp CTGGTTTGCTGCGGCGGGGAAACAGTCACTTCCTGGTaGGCAAGGCGCCTCTACTCCCGCCGCACGCGCAGC +
Preference number: 6 (lower is better)
Translates to: LVCCGGETVTSW*ARRLYSRRTRS
Trigger: GCTGCGCGTGCGGCGGGAGTAGAGGCGCCTTGCGCACCAGGAAGTGACTGTTTCCCCGCCGCAGCAAACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000478422.1
ENST00000545398.5
CDS GCA 72 bp AGGCGGCAAACTAAAAGGCCAGCGGATGGCCTGGTTTaGTGCGGCGGGGAAACAGTCACTTCCTGGTGCGCA +
Preference number: 6 (lower is better)
Translates to: RRQTKRPADGLV*CGGETVTSWCA
Trigger: TGCGCACCAGGAAGTGACTGTTTCCCCGCCGCAGCAAACCAGGCCATCCGCTGGCCTTTTAGTTTGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000478422.1
ENST00000545398.5
CDS CAA 90 bp TCTGCTCACCCTTCCTTCAGCTGGACCGGCTCCAGACACTATTCCTaGCTAAACCAAACAAGCAAATGGGTTGACTGCTGTGTCGTGTCC +
Preference number: 6 (lower is better)
Translates to: SAHPSFSWTGSRHYS*LNQTSKWVDCCVVS
Trigger: GGACACGACACAGCAGTCAACCCATTTGCTTGTTTGGTTTAGCAAGGAATAGTGTCTGGAGCCGGTCCAGCTGAAGGAAGGGTGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS TCA 72 bp ACACTATTCCTTGCTAAACCAAACAAGCAAATGGGTTaGCTGCTGTGTCGTGTCCCGAATGCAGCCCACAGG +
Preference number: 6 (lower is better)
Translates to: TLFLAKPNKQMG*LLCRVPNAAHR
Trigger: CCTGTGGGCTGCATTCGGGACACGACACAGCAGTCAACCCATTTGCTTGTTTGGTTTAGCAAGGAATAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS GCA 72 bp TATTCCTTGCTAAACCAAACAAGCAAATGGGTTGACTaGTGTGTCGTGTCCCGAATGCAGCCCACAGGCAGT +
Preference number: 6 (lower is better)
Translates to: YSLLNQTSKWVD*CVVSRMQPTGS
Trigger: ACTGCCTGTGGGCTGCATTCGGGACACGACACAGCAGTCAACCCATTTGCTTGTTTGGTTTAGCAAGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372936.4
CDS CCA 72 bp TGCTTATCGAGTAAAGAGGAGCACCAGCTCACAATGTaGGGTGTGAGGGAACAAATCCACAGGTACAGCTTG +
Preference number: 6 (lower is better)
Translates to: CLSSKEEHQLTM*GVREQIHRYSL
Trigger: CAAGCTGTACCTGTGGATTTGTTCCCTCACACCCCACATTGTGAGCTGGTGCTCCTCTTTACTCGATAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372935.5
ENST00000372936.4
ENST00000372939.5
ENST00000545398.5
CDS TCA 72 bp GGACAAATAAGGTTTGCTTGGAGGGTATGGCATATGTaGAAGTCTGTGGCTAAGAAGATCAAGACAGTCCAT +
Preference number: 6 (lower is better)
Translates to: GQIRFAWRVWHM*KSVAKKIKTVH
Trigger: ATGGACTGTCTTGATCTTCTTAGCCACAGACTTTCACATATGCCATACCCTCCAAGCAAACCTTATTTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488615.1
CDS TCA 72 bp GATAACAATAAAGGGAAAGCAGGAATGTTCTCTGGATaGGGACAAATAAGGTTTGCTTGGAGGGTATGGCAT +
Preference number: 6 (lower is better)
Translates to: DNNKGKAGMFSG*GQIRFAWRVWH
Trigger: ATGCCATACCCTCCAAGCAAACCTTATTTGTCCTCATCCAGAGAACATTCCTGCTTTCCCTTTATTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488615.1
CDS GCA 72 bp AGATCAAGACAGTCCATAGAAGGGGAGTTCCAATCTTaGCATAAAGCAGGAGTCAACAAACTACTTATGTCA +
Preference number: 6 (lower is better)
Translates to: RSRQSIEGEFQS*HKAGVNKLLMS
Trigger: TGACATAAGTAGTTTGTTGACTCCTGCTTTATGGCAAGATTGGAACTCCCCTTCTATGGACTGTCTTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488615.1