Pregenerated sensors for TRMT1L (Homo sapiens)
Ensembl gene IDs: ENSG00000121486Ensembl transcript IDs: ENST00000367506.10, ENST00000458395.1, ENST00000465827.1, ENST00000487028.1
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGGACAAATTTTACTTCTaGGAGGTAGTACAACCAACC | + |
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Preference number: 2 (lower is better) Translates to: VPNYYYCYENKIAQVAKRDKFYF*EVVQPT Trigger: GGTTGGTTGTACTACCTCTCAGAAGTAAAATTTGTC...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| 3UTR-3UTR TCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGAGCCCAACTCATCACTaGTCAACATATTTCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: TFAMSQITTIVTRIRLLRSPTHH*STYFML Trigger: CAGCATGAAATATGTTGATCAGTGATGAGTTGGGCT...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| 3UTR-3UTR CCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGGAAAATAAACTCTCTTaGGAATACGCTGTACTAGCA | + |
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Preference number: 2 (lower is better) Translates to: TFAMSQITTIVTRIRLLRENKLS*EYAVLA Trigger: TGCTAGTACAGCGTATTCCCAAGAGAGTTTATTTTC...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGATCCGGGGCCGGAGCTaGGACCCCAGCCGAGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRIRGRS*DPSRVP Trigger: CGGGACTCGGCTGGGGTCCCAGCTCCGGCCCCGGAT...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGGCCGGGGTCGGGACCTaGACCTGGGCCACCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: TFAMSQITTIVTRIRLLRAGVGT*TWATST Trigger: GGTGGAGGTGGCCCAGGTCCAGGTCCCGACCCCGGC...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGGTCGGGACCTGGACCTaGGCCACCTCCACCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRVGTWT*ATSTSS Trigger: GGAGGAGGTGGAGGTGGCCCAGGTCCAGGTCCCGAC...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGGAGTGGGGAAGCAAGTaGGGAGGGCGGGATGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLEWGSK*GGRDAC Trigger: GCACGCATCCCGCCCTCCCCACTTGCTTCCCCACTC...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCAGGCAGCGATTCCAGATaGCCGTCCGCTTCCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRAGSDSR*PSASLS Trigger: GGAAAGGGAAGCGGACGGGCATCTGGAATCGCTGCC...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGGCTGGATCCAAGGAGTaGGGAAGCAAGTGGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRAGSKE*GSKWGG Trigger: CCCTCCCCACTTGCTTCCCCACTCCTTGGATCCAGC...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGGTCAGAGAACTGACGTaGATGCCCACAGGGCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRVRELT*MPTGLD Trigger: ATCCAGCCCTGTGGGCATTCACGTCAGTTCTCTGAC...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCAGTGGGGAGGGCGGGATaGGTGCAACAGACAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRAVGRAG*VQQTKD Trigger: ATCTTTTGTCTGTTGCACGCATCCCGCCCTCCCCAC...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGTTTGTTGCATCGGGCTaGAGCTCTTGCCACTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRFVASG*SSCHCS Trigger: GCTGCAGTGGCAAGAGCTGCAGCCCGATGCAACAAA...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGGAATGCCCACAGGGCTaGATCCAAGGAGTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TFAMSQITTIVTRIRLLRECPQG*IQGVGK Trigger: CTTCCCCACTCCTTGGATCCAGCCCTGTGGGCATTC...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGCCAGGCATGCTTCCATaGCAGTTACAAGGCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLPGMLP*QLQGSC Trigger: ACAGCTGCCTTGTAACTGTCATGGAAGCATGCCTGG...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGCTGGACATGGCTTTCTaGCTGTCCTCCAGTGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLLDMAF*LSSSVG Trigger: ACCTACACTGGAGGACAGTCAGAAAGCCATGTCCAG...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGGGAGGGCGGGATGCGTaGAACAGACAAAAGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLGGRDA*NRQKMK Trigger: CTTCATCTTTTGTCTGTTGCACGCATCCCGCCCTCC...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGTCGGGCTGCAGCTCTTaGCACTGCAGCTACAACAAT | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRSGCSS*HCSYNN Trigger: ATTGTTGTAGCTGCAGTGGCAAGAGCTGCAGCCCGA...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCATGCAGCTCTTGCCACTaGAGCTACAACAATTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRACSSCH*SYNNSG Trigger: GCCAGAATTGTTGTAGCTGCAGTGGCAAGAGCTGCA...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCACTTCTATGCCTTTGTTaGATCGGGCTGCAGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRALLCLC*IGLQLL Trigger: CAAGAGCTGCAGCCCGATGCAACAAAGGCATAGAAG...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGTTCCTTAGGGCACAATaGACAAGCCTGTCTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLFLRAQ*TSLSVA Trigger: GGCAACAGACAGGCTTGTCCATTGTGCCCTAAGGAA...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGGATGCTGACTGGACATaGCTTTCTGACTGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLDADWT*LSDCPP Trigger: TGGAGGACAGTCAGAAAGCCATGTCCAGTCAGCATC...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCACCCATTGGGTCAAAATaGGTTCGGCTTACTCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRAPIGSK*VRLTRK Trigger: CTTTCGAGTAAGCCGAACTCATTTTGACCCAATGGG...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTCAGAGGTGCATCTGTaGGTACACCCATTGGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: TFAMSQITTIVTRIRLLRSEVHL*VHPLGQ Trigger: TTGACCCAATGGGTGTACGCACAGATGCACCTCTGA...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCAAAACTGCATCAGAGGTaGATCTGTGCGTACACCCAT | + |
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Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRAKLHQR*ICAYTH Trigger: ATGGGTGTACGCACAGATGCACCTCTGATGCAGTTT...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGTGTGCGTACACCCATTaGGTCAAAATGAGTTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLCAYTH*VKMSSA Trigger: AGCCGAACTCATTTTGACCCAATGGGTGTACGCACA...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGTGTAAATTCTGGAGGTaGCGACGAAGCTTATGGCTA | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLCKFWR*RRSLWL Trigger: TAGCCATAAGCTTCGTCGTCACCTCCAGAATTTACA...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGATTGAAAAGGGAACTTaGCCACAGAGGTCCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRIEKGT*PQRSKF Trigger: GAACTTGGACCTCTGTGGTCAAGTTCCCTTTTCAAT...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGATGTTCCAGAGCCACTaGAAACAGTACTTCTATGCC | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRMFQSH*KQYFYA Trigger: GGCATAGAAGTACTGTTTGCAGTGGCTCTGGAACAT...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCACTGTCTTTCCAGGCATaGTTCCATGACAGTTACAAG | + |
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Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRALSFQA*FHDSYK Trigger: CTTGTAACTGTCATGGAAGCATGCCTGGAAAGACAG...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGAGGTCCAAGTTCTATTaGTGTCTTTCCAGGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLRSKFY*CLSRHA Trigger: AGCATGCCTGGAAAGACAGCAATAGAACTTGGACCT...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCATCTTCTGCAGCCACTTaGTTCTGCTTTGTCATTCAC | + |
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Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRASSAAT*FCFVIH Trigger: GTGAATGACAAAGCAGAAGCAAGTGGCTGCAGAAGA...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGACGTTTACCATCTTCTaGAGCCACTTGCTTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLTFTIF*SHLLLL Trigger: AAGCAGAAGCAAGTGGCTGCAGAAGATGGTAAACGT...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGTCTCCTTTATTCATGTaGCGCCTAACATGTCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRSPLFM*RLTCPS Trigger: GCTAGGACATGTTAGGCGCCACATGAATAAAGGAGA...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTCAGCAAGCTGCCTTTaGATTGAGATGTGTCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: TFAMSQITTIVTRIRLLRSASCL*IEMCLL Trigger: CAAGAGACACATCTCAATTCAAAGGCAGCTTGCTGA...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCAATCTGTAGAAGTCACTaGCACTATGCCAAGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRAICRSH*HYAKVS Trigger: AGAAACCTTGGCATAGTGTCAGTGACTTCTACAGAT...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGGTCTTTATTAGGGTCTaGATGTCATCCAAACCATGG | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLVFIRV*MSSKPW Trigger: CCATGGTTTGGATGACATTCAGACCCTAATAAAGAC...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGGAGGATGTTCAGTACTaGCATCAGTCTTTTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKREDVQY*HQSFAS Trigger: AGAAGCAAAAGACTGATGTCAGTACTGAACATCCTC...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGCAAACAGTACTTCTATaGCTTTGTTGCATCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TFAMSQITTIVTRIRLLRQTVLL*LCCIGL Trigger: CAGCCCGATGCAACAAAGGCATAGAAGTACTGTTTG...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGCAAAATTTCCTTAGGTaGTTTAGCAGTGGAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRQNFLR*FSSGSC Trigger: GCAGCTTCCACTGCTAAACCACCTAAGGAAATTTTG...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGATCCCATTATCCCAGTaGCTCCAAAAGCATCTAGAC | + |
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Preference number: 4 (lower is better) Translates to: TFAMSQITTIVTRIRLLRIPLSQ*LQKHLD Trigger: GTCTAGATGCTTTTGGAGCCACTGGGATAATGGGAT...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTCTTCAGATGCTGACTaGACATGGCTTTCTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: TFAMSQITTIVTRIRLLRSSDAD*TWLSDC Trigger: ACAGTCAGAAAGCCATGTCCAGTCAGCATCTGAAGA...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGAAGCTGCCTTTGAATTaGGATGTGTCTCTTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRKLPLN*DVSLAF Trigger: AAAAGCAAGAGACACATCTCAATTCAAAGGCAGCTT...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGATCTATACAGACACCTaGGAACCAATTCTTCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRIYTDT*EPILLY Trigger: GTAGAGAAGAATTGGTTCTCAGGTGTCTGTATAGAT...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGAAGGTAAGTGACAGATaGACATCCTGTAACCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLKVSDR*TSCNLQ Trigger: TTGAAGGTTACAGGATGTGCATCTGTCACTTACCTT...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGAGGATAGATTTAAACTaGATCAGAGGTGCATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLRIDLN*IRGASV Trigger: CACAGATGCACCTCTGATGCAGTTTAAATCTATCCT...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGCTGAGTTCAATGAGCTaGCAGAGTCAAAATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRLSSMS*QSQNFH Trigger: ATGGAAATTTTGACTCTGCCAGCTCATTGAACTCAG...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCATTCTCCAATAATGTTTaGTTTCACTGGTCGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRAFSNNV*FHWSTR Trigger: CCTTGTCGACCAGTGAAACCAAACATTATTGGAGAA...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGAATGCATCAGTACATTaGCATCCATTTTGGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRNASVH*HPFWSP Trigger: AGGTGACCAAAATGGATGCCAATGTACTGATGCATT...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGCAGCTACAACAATTCTaGCTGCTAGTTCCTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VPNYYYCYENKIAQVAKRQLQQF*LLVPCN Trigger: ATTACAAGGAACTAGCAGCCAGAATTGTTGTAGCTG...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGAAGATGAAGAACCAGTaGCCAAATCCTGTTAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFAMSQITTIVTRIRLLRKMKNQ*PNPVSR Trigger: TCTACTAACAGGATTTGGTCACTGGTTCTTCATCTT...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGTCATCCAAACCATGGTaGAGAGATTCAAATAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLSSKPW*RDSNSI Trigger: AATGCTATTTGAATCTCTTCACCATGGTTTGGATGA...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR TCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGGACAAATTTTACTTCTaGGAGGTAGTACAACCAACC | + |
|
Preference number: 4 (lower is better) Translates to: TFAMSQITTIVTRIRLLRDKFYF*EVVQPT Trigger: GGTTGGTTGTACTACCTCTCAGAAGTAAAATTTGTC...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCATCAAAAGATCTCAAATaGATCAGTACATTGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRASKDLK*ISTLAS Trigger: GGATGCCAATGTACTGATGCATTTGAGATCTTTTGA...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CCA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCAGAAAATAAACTCTCTTaGGAATACGCTGTACTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QILLLRGSTTNQMNTVRAENKLS*EYAVLA Trigger: TGCTAGTACAGCGTATTCCCAAGAGAGTTTATTTTC...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR GCA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGAAGTCACTGACACTATaGCAAGGTTTCTTATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKNYSWYRELLGHLYRHLKSLTL*QGFLYF Trigger: GAAATATAAGAAACCTTGGCATAGTGTCAGTGACTT...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
||
| CDS-3UTR GCA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGGATTGTAACTTTGACTaGATTTCCAAGATGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFAMSQITTIVTRIRLLRDCNFD*ISKMFC Trigger: GCAAAACATCTTGGAAATGCAGTCAAAGTTACAATC...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS GCA 90 bp | CTTGGGGACGGCGTCCAATTGGGTAAGAGGGTTCGGTTTCTACGGTaGGTCTCCGGCCCACCGGCCAACCACCAAACCGAACAAAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: LGDGVQLGKRVRFLR*VSGPPANHQTEQRL Trigger: TAGTCTTTGTTCGGTTTGGTGGTTGGCCGGTGGGCCGGAGACGCACCGTAGAAACCGAACCCTCTTACCCAATTGGACGCCGTCCCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487028.1 |
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| CDS CCA 90 bp | GACGTGAATGCCCACAGGGCTGGATCCAAGGAGTGGGGAAGCAAGTaGGGAGGGCGGGATGCGTGCAACAGACAAAAGATGAAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: DVNAHRAGSKEWGSK*GGRDACNRQKMKNQ Trigger: CTGGTTCTTCATCTTTTGTCTGTTGCACGCATCCCGCCCTCCCCACTTGCTTCCCCACTCCTTGGATCCAGCCCTGTGGGCATTCACGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS GCA 90 bp | CTACCAACACAAAATGTTCCAGAGCCACTGCAAACAGTACTTCTATaGCTTTGTTGCATCGGGCTGCAGCTCTTGCCACTGCAGCTACAA | + |
|
Preference number: 5 (lower is better) Translates to: LPTQNVPEPLQTVLL*LCCIGLQLLPLQLQ Trigger: TTGTAGCTGCAGTGGCAAGAGCTGCAGCCCGATGCAACAAAGGCATAGAAGTACTGTTTGCAGTGGCTCTGGAACATTTTGTGTTGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
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| CDS GCA 90 bp | CCTCAAAACTCTCACAACTACCAACACAAAATGTTCCAGAGCCACTaGAAACAGTACTTCTATGCCTTTGTTGCATCGGGCTGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQNSHNYQHKMFQSH*KQYFYAFVASGCSS Trigger: AGAGCTGCAGCCCGATGCAACAAAGGCATAGAAGTACTGTTTGCAGTGGCTCTGGAACATTTTGTGTTGGTAGTTGTGAGAGTTTTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
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| CDS TCA 90 bp | CACAGAGGTCCAAGTTCTATTGCTGTCTTTCCAGGCATGCTTCCATaGCAGTTACAAGGCAGCTGTCTATATGGGTTTTCTTCTACCATA | + |
|
Preference number: 5 (lower is better) Translates to: HRGPSSIAVFPGMLP*QLQGSCLYGFSSTI Trigger: TATGGTAGAAGAAAACCCATATAGACAGCTGCCTTGTAACTGTCATGGAAGCATGCCTGGAAAGACAGCAATAGAACTTGGACCTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
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| CDS GCA 90 bp | AACTTGACCACAGAGGTCCAAGTTCTATTGCTGTCTTTCCAGGCATaGTTCCATGACAGTTACAAGGCAGCTGTCTATATGGGTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NLTTEVQVLLLSFQA*FHDSYKAAVYMGFL Trigger: AAGAAAACCCATATAGACAGCTGCCTTGTAACTGTCATGGAAGCATGCCTGGAAAGACAGCAATAGAACTTGGACCTCTGTGGTCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
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| CDS-3UTR CAA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGATCGGGCTGCAGCTCTaGCCACTGCAGCTACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: TFAMSQITTIVTRIRLLRIGLQL*PLQLQQ Trigger: TTGTTGTAGCTGCAGTGGCAAGAGCTGCAGCCCGAT...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS GCA 90 bp | TTTCTGAGGTATAGAATAGTTGGGACAAACTTGTACATCCGTGTCTaGCTCTTTCAAAATTTCCTTAGGTGGTTTAGCAGTGGAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLRYRIVGTNLYIRV*LFQNFLRWFSSGSC Trigger: GCAGCTTCCACTGCTAAACCACCTAAGGAAATTTTGAAAGAGGCAGACACGGATGTACAAGTTTGTCCCAACTATTCTATACCTCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000487028.1 |
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| CDS GCA 90 bp | ATACAGACACCTGAGAACCAATTCTTCTCTACGTTTACCATCTTCTaGAGCCACTTGCTTCTGCTTTGTCATTCACTGACATTTCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IQTPENQFFSTFTIF*SHLLLLCHSLTFQL Trigger: GAGTTGAAATGTCAGTGAATGACAAAGCAGAAGCAAGTGGCTGCAGAAGATGGTAAACGTAGAGAAGAATTGGTTCTCAGGTGTCTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGACTTCTATGCCTTTGTaGCATCGGGCTGCAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VPNYYYCYENKIAQVAKRTSMPL*HRAAAL Trigger: AAGAGCTGCAGCCCGATGCAACAAAGGCATAGAAGT...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGGAGGTCCAAGTTCTATaGCTGTCTTTCCAGGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: KKNYSWYRELLGHLYRHLEVQVL*LSFQAC Trigger: GCATGCCTGGAAAGACAGCAATAGAACTTGGACCTC...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGCTGTGCGTACACCCATaGGGTCAAAATGAGTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: TFAMSQITTIVTRIRLLRLCVHP*GQNEFG Trigger: GCCGAACTCATTTTGACCCAATGGGTGTACGCACAG...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGATTGAGATGTGTCTCTaGCTTTTAGCCTCCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KKNYSWYRELLGHLYRHLIEMCL*LLASSG Trigger: CCCTGAGGAGGCTAAAAGCAAGAGACACATCTCAAT...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGAGTACTTCTATGCCTTaGTTGCATCGGGCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TFAMSQITTIVTRIRLLRSTSMP*LHRAAA Trigger: AGCTGCAGCCCGATGCAACAAAGGCATAGAAGTACT...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGATAGTTGGGACAAACTaGTACATCCGTGTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TFAMSQITTIVTRIRLLRIVGTN*YIRVCL Trigger: GAGGCAGACACGGATGTACAAGTTTGTCCCAACTAT...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGAAATGCATCAGTACATaGGCATCCATTTTGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: VPNYYYCYENKIAQVAKRKCIST*ASILVT Trigger: GGTGACCAAAATGGATGCCAATGTACTGATGCATTT...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCATTGAGGAATCCAGTATaGAAAAGGGAACTTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QILLLRGSTTNQMNTVRALRNPV*KRELDH Trigger: GTGGTCAAGTTCCCTTTTCAATACTGGATTCCTCAA...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | CAAATTTTACTTCTGAGAGGTAGTACAACCAACCAAATGAATACTGTACGTGCACCACTTGCTTCTGCTTaGTCATTCACTGACATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QILLLRGSTTNQMNTVRAPLASA*SFTDIS Trigger: TGAAATGTCAGTGAATGACAAAGCAGAAGCAAGTGG...TGCACGTACAGTATTCATTTGGTTGGTTGTACTACCTCTCAGAAGTAAAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | GTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGTTGCTAAAAGGCATTTCCAAGATGTTTaGCCCACTGTAATCCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: VPNYYYCYENKIAQVAKRHFQDV*PTVIPL Trigger: TAATGGGATTACAGTGGGCAAAACATCTTGGAAATG...CCTTTTAGCAACCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | ACATTTGCAATGTCCCAAATTACTACTATTGTTACGAGAATAAGATTGCTCAGGGCAACATGCTGTGCCTaGGCATATAAAGAACTGATA | + |
|
Preference number: 5 (lower is better) Translates to: TFAMSQITTIVTRIRLLRATCCA*AYKELI Trigger: TATCAGTTCTTTATATGCCAAGGCACAGCATGTTGC...CCTGAGCAATCTTATTCTCGTAACAATAGTAGTAATTTGGGACATTGCAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGGTTACGAGAATAAGATaGCTCAGGTTGCTAAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KKNYSWYRELLGHLYRHLVTRIR*LRLLKG Trigger: TCCTTTTAGCAACCTGAGCAATCTTATTCTCGTAAC...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS-3UTR CAA 90 bp | AAAAAGAACTACAGTTGGTATAGAGAACTATTAGGCCATCTATACAGACACCTGACATTGGCATCCATTTaGGTCACCTTAATATTACCA | + |
|
Preference number: 5 (lower is better) Translates to: KKNYSWYRELLGHLYRHLTLASI*VTLILP Trigger: TGGTAATATTAAGGTGACCAAAATGGATGCCAATGT...CAGGTGTCTGTATAGATGGCCTAATAGTTCTCTATACCAACTGTAGTTCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS TCA 90 bp | CTATTTTCACGGTCCTTCACTTATGTAATTTTCATATTAAACTGCTaGATCAGAACTTCCTTTCTACCTTCTTCAACTTCAAGCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: LFSRSFTYVIFILNC*IRTSFLPSSTSSHT Trigger: AGTGTGGCTTGAAGTTGAAGAAGGTAGAAAGGAAGTTCTGATTCAGCAGTTTAATATGAAAATTACATAAGTGAAGGACCGTGAAAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465827.1 |
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| CDS TCA 72 bp | GGACCCGGAGCGGGGCTCACGGCGGGGTCAGAGAACTaGCGTGAATGCCCACAGGGCTGGATCCAAGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GPGAGLTAGSEN*RECPQGWIQGV Trigger: CACTCCTTGGATCCAGCCCTGTGGGCATTCACGTCAGTTCTCTGACCCCGCCGTGAGCCCCGCTCCGGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367506.10 |
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| CDS GCA 72 bp | GGCGTCCAATTGGGTAAGAGGGTTCGGTTTCTACGGTaGGTCTCCGGCCCACCGGCCAACCACCAAACCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GVQLGKRVRFLR*VSGPPANHQTE Trigger: TTCGGTTTGGTGGTTGGCCGGTGGGCCGGAGACGCACCGTAGAAACCGAACCCTCTTACCCAATTGGACGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487028.1 |
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| CDS GCA 72 bp | CCAGAGCCACTGCAAACAGTACTTCTATGCCTTTGTTaGATCGGGCTGCAGCTCTTGCCACTGCAGCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: PEPLQTVLLCLC*IGLQLLPLQLQ Trigger: TTGTAGCTGCAGTGGCAAGAGCTGCAGCCCGATGCAACAAAGGCATAGAAGTACTGTTTGCAGTGGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
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| CDS CAA 72 bp | TCCAGAGCCACTGCAAACAGTACTTCTATGCCTTTGTaGCATCGGGCTGCAGCTCTTGCCACTGCAGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: SRATANSTSMPL*HRAAALATAAT Trigger: TGTAGCTGCAGTGGCAAGAGCTGCAGCCCGATGCAACAAAGGCATAGAAGTACTGTTTGCAGTGGCTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
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| CDS CAA 72 bp | TGTTCCAGAGCCACTGCAAACAGTACTTCTATGCCTTaGTTGCATCGGGCTGCAGCTCTTGCCACTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSRATANSTSMP*LHRAAALATAA Trigger: AGCTGCAGTGGCAAGAGCTGCAGCCCGATGCAACAAAGGCATAGAAGTACTGTTTGCAGTGGCTCTGGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
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| CDS GCA 72 bp | CAAAATGTTCCAGAGCCACTGCAAACAGTACTTCTATaGCTTTGTTGCATCGGGCTGCAGCTCTTGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: QNVPEPLQTVLL*LCCIGLQLLPL Trigger: CAGTGGCAAGAGCTGCAGCCCGATGCAACAAAGGCATAGAAGTACTGTTTGCAGTGGCTCTGGAACATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
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| CDS CCA 72 bp | AAACTGCATCAGAGGTGCATCTGTGCGTACACCCATTaGGTCAAAATGAGTTCGGCTTACTCGAAAGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KLHQRCICAYTH*VKMSSAYSKAC Trigger: GCAGGCTTTCGAGTAAGCCGAACTCATTTTGACCCAATGGGTGTACGCACAGATGCACCTCTGATGCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000465827.1 |
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| CDS GCA 72 bp | TCTCACAACTACCAACACAAAATGTTCCAGAGCCACTaGAAACAGTACTTCTATGCCTTTGTTGCATCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHNYQHKMFQSH*KQYFYAFVASG Trigger: GCCCGATGCAACAAAGGCATAGAAGTACTGTTTGCAGTGGCTCTGGAACATTTTGTGTTGGTAGTTGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
||
| CDS GCA 72 bp | ACAGAGGTCCAAGTTCTATTGCTGTCTTTCCAGGCATaGTTCCATGACAGTTACAAGGCAGCTGTCTATATG | + |
|
Preference number: 6 (lower is better) Translates to: TEVQVLLLSFQA*FHDSYKAAVYM Trigger: CATATAGACAGCTGCCTTGTAACTGTCATGGAAGCATGCCTGGAAAGACAGCAATAGAACTTGGACCTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
||
| CDS TCA 72 bp | CCAAGTTCTATTGCTGTCTTTCCAGGCATGCTTCCATaGCAGTTACAAGGCAGCTGTCTATATGGGTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSSIAVFPGMLP*QLQGSCLYGFS Trigger: AGAAAACCCATATAGACAGCTGCCTTGTAACTGTCATGGAAGCATGCCTGGAAAGACAGCAATAGAACTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
||
| CDS CAA 72 bp | CAATTCTTCTCTACGTTTACCATCTTCTGCAGCCACTaGCTTCTGCTTTGTCATTCACTGACATTTCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: QFFSTFTIFCSH*LLLCHSLTFQL Trigger: GAGTTGAAATGTCAGTGAATGACAAAGCAGAAGCAAGTGGCTGCAGAAGATGGTAAACGTAGAGAAGAATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
||
| CDS CAA 90 bp | CCTGAGAACCAATTCTTCTCTACGTTTACCATCTTCTGCAGCCACTaGCTTCTGCTTTGTCATTCACTGACATTTCAACTCTTTCAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: PENQFFSTFTIFCSH*LLLCHSLTFQLFQL Trigger: TAACTGAAAGAGTTGAAATGTCAGTGAATGACAAAGCAGAAGCAAGTGGCTGCAGAAGATGGTAAACGTAGAGAAGAATTGGTTCTCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367506.10 |
||
| CDS TCA 72 bp | AATTCAACTGAGACTTTCCAGTGTAAATTCTGGAGGTaGCGACGAAGCTTATGGCTATTACAAGCTCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: NSTETFQCKFWR*RRSLWLLQALN Trigger: ATTCAGAGCTTGTAATAGCCATAAGCTTCGTCGTCACCTCCAGAATTTACACTGGAAAGTCTCAGTTGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000487028.1 |
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| CDS GCA 72 bp | TATAGAATAGTTGGGACAAACTTGTACATCCGTGTCTaGCTCTTTCAAAATTTCCTTAGGTGGTTTAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: YRIVGTNLYIRV*LFQNFLRWFSS Trigger: ACTGCTAAACCACCTAAGGAAATTTTGAAAGAGGCAGACACGGATGTACAAGTTTGTCCCAACTATTCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000487028.1 |
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| CDS CCA 72 bp | TGTTGCCTGCATCAAGATTATCTGAGTTCAATGAGCTaGCAGAGTCAAAATTTCCATCAGTTACAAAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: CCLHQDYLSSMS*QSQNFHQLQKL Trigger: TAGCTTTTGTAACTGATGGAAATTTTGACTCTGCCAGCTCATTGAACTCAGATAATCTTGATGCAGGCAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000487028.1 |
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| CDS CCA 72 bp | TACATCCGTGTCTGCCTCTTTCAAAATTTCCTTAGGTaGTTTAGCAGTGGAAGCTGCAATATAACTAGATTT | + |
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Preference number: 6 (lower is better) Translates to: YIRVCLFQNFLR*FSSGSCNITRF Trigger: AAATCTAGTTATATTGCAGCTTCCACTGCTAAACCACCTAAGGAAATTTTGAAAGAGGCAGACACGGATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000487028.1 |
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| CDS CAA 72 bp | AGAGATTCAAATAGCATTCTTTTGAGGAATCCAGTATaGAAAAGGGAACTTGACCACAGAGGTCCAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RDSNSILLRNPV*KRELDHRGPSS Trigger: AGAACTTGGACCTCTGTGGTCAAGTTCCCTTTTCAATACTGGATTCCTCAAAAGAATGCTATTTGAATCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000458395.1 |
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| CDS CAA 90 bp | AGGAAGCCATCTGTCAATCTGGGGCTAGTCACTTCATACATTTCATaGTTGTTAATACTACACTACACTACTCAGAGTTTGATTAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: RKPSVNLGLVTSYIS*LLILHYTTQSLIKL Trigger: CAACTTAATCAAACTCTGAGTAGTGTAGTGTAGTATTAACAACAATGAAATGTATGAAGTGACTAGCCCCAGATTGACAGATGGCTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465827.1 |
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| CDS CAA 72 bp | ATCTGTTTTCTGAGGTATAGAATAGTTGGGACAAACTaGTACATCCGTGTCTGCCTCTTTCAAAATTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: ICFLRYRIVGTN*YIRVCLFQNFL Trigger: AAGGAAATTTTGAAAGAGGCAGACACGGATGTACAAGTTTGTCCCAACTATTCTATACCTCAGAAAACAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367506.10 ENST00000487028.1 |
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| CDS CAA 72 bp | TCTGTCAATCTGGGGCTAGTCACTTCATACATTTCATaGTTGTTAATACTACACTACACTACTCAGAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SVNLGLVTSYIS*LLILHYTTQSL Trigger: CAAACTCTGAGTAGTGTAGTGTAGTATTAACAACAATGAAATGTATGAAGTGACTAGCCCCAGATTGACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465827.1 |
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| CDS CAA 90 bp | AAGCCATCTGTCAATCTGGGGCTAGTCACTTCATACATTTCATTGTaGTTAATACTACACTACACTACTCAGAGTTTGATTAAGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: KPSVNLGLVTSYISL*LILHYTTQSLIKLS Trigger: TGACAACTTAATCAAACTCTGAGTAGTGTAGTGTAGTATTAACAACAATGAAATGTATGAAGTGACTAGCCCCAGATTGACAGATGGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465827.1 |
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