Pregenerated sensors for TRMT10C (Homo sapiens)
Ensembl gene IDs: ENSG00000174173Ensembl transcript IDs: ENST00000309922.7, ENST00000495642.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATAAAAAACCCTACAGTCAGTTaGGAAAGACTACCTTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: CRASKPTPGHHPLGTSIKNPTVS*ERLPLE Trigger: TTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTT...TTTTATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| 3UTR-3UTR GCA 90 bp | ATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGGAGCCACGTGTTCTGTaGACATTCAGAGAACCTTTT | + |
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Preference number: 2 (lower is better) Translates to: IGKRHNPTVSWERLPLEEEPRVL*TFREPF Trigger: AAAAGGTTCTCTGAATGTGCACAGAACACGTGGCTC...CTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| 3UTR-3UTR TCA 90 bp | TTTAATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGATCAAATGTTCTCATTTaGGCCACGTGTTCTGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: FNWEKTQPYSQLGKTTFRSNVLI*ATCSVH Trigger: GTGCACAGAACACGTGGCTCAAATGAGAACATTTGA...TCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| 3UTR-3UTR CAA 90 bp | TGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATAAAACAACCCTACAGTCAGTaGGGAAAGACTACCTTTAGA | + |
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Preference number: 3 (lower is better) Translates to: CRASKPTPGHHPLGTSIKQPYSQ*GKTTFR Trigger: TCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTG...TTTTATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| 3UTR TCA 72 bp | ACGCATTTACTTTTTAAGCCATCAAATGTTCTCATTTaGGCCACGTGTTCTGTGCACATTCAGAGAACCTTT | + |
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Preference number: 3 (lower is better) Translates to: THLLFKPSNVLI*ATCSVHIQRTF Trigger: AAAGGTTCTCTGAATGTGCACAGAACACGTGGCTCAAATGAGAACATTTGATGGCTTAAAAAGTAAATGCGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CCA 90 bp | GGGGTGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATTCAGCCGTTTTGCCTTaGCTAGGGATGTGCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GVQSFQAHPRAPPSRNLHSAVLP*LGMCLA Trigger: AGCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGA...ATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR GCA 90 bp | GGGGTGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATTGGAAGGCATTCAGTTaGCAGGTTCAGCCGTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: GVQSFQAHPRAPPSRNLHWKAFS*QVQPFC Trigger: GCAAAACGGCTGAACCTGGCAACTGAATGCCTTCCA...ATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR GCA 90 bp | TGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATAAAAAAAGGTTGTCCAAACTaGATGGCCTGGGCACCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CRASKPTPGHHPLGTSIKKGCPN*MAWAPF Trigger: GAAGGGTGCCCAGGCCATGCAGTTTGGACAACCTTT...TTTTATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCA 56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR GCA 90 bp | TGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATAAAACCTTGGCTAGGGATGTaGCTGGCTGCATACTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: CRASKPTPGHHPLGTSIKPWLGM*LAAYSY Trigger: ATAAGAGTATGCAGCCAGGCACATCCCTAGCCAAGG...TTTTATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CCA 90 bp | TGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATAAAATTCAGTGATGTGTTCTaGTACTTCTCTGCCAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: CRASKPTPGHHPLGTSIKFSDVF*YFSAKQ Trigger: TTGCTTGGCAGAGAAGTACCAGAACACATCACTGAA...TTTTATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR GCA 90 bp | TGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATAAAATGCTTCTTCCCTTGCTaGTGCTTTCATTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CRASKPTPGHHPLGTSIKCFFPC*CFHFLF Trigger: AAAAAGGAAATGAAAGCAGCAGCAAGGGAAGAAGCA...TTTTATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR GCA 90 bp | TGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATAAAAAATTGCAGAGCCTCTTaGCAATTACCATTGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: CRASKPTPGHHPLGTSIKNCRAS*QLPLFF Trigger: GAAAAACAATGGTAATTGGCAAGAGGCTCTGCAATT...TTTTATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CCA 90 bp | ATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGGTTGTCCAAACTGCATaGCCTGGGCACCCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: IGKRHNPTVSWERLPLEEVVQTA*PGHPSS Trigger: GCTGGAAGGGTGCCCAGGCCATGCAGTTTGGACAAC...CTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CCA 90 bp | TTTAATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAGATAGTGGTTCCCGCTaGCGCAAAGAACAGGGACCC | + |
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Preference number: 4 (lower is better) Translates to: FNWEKTQPYSQLGKTTFRDSGSR*RKEQGP Trigger: GGGTCCCTGTTCTTTGCGCCAGCGGGAACCACTATC...TCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CCA 90 bp | TTTAATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGACCAAACTGCATGGCCTaGGCACCCTTCCAGCCCATT | + |
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Preference number: 4 (lower is better) Translates to: FNWEKTQPYSQLGKTTFRPNCMA*APFQPI Trigger: AATGGGCTGGAAGGGTGCCCAGGCCATGCAGTTTGG...TCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CCA 90 bp | TACTTTTTAAGCCATCAAATGTTCTCATTTGAGCCACGTGTTCTGTGCACATTCAAAGAACAGGGACCCTaGAGGACGAAGGACTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: YFLSHQMFSFEPRVLCTFKEQGP*RTKDSD Trigger: GTCGGAGTCCTTCGTCCTCCAGGGTCCCTGTTCTTT...GAATGTGCACAGAACACGTGGCTCAAATGAGAACATTTGATGGCTTAAAAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR GCA 90 bp | AGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGAAAAATGAAACAAAACCCCAGGAGTaGAGAGATAGTGGTTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: RHNPTVSWERLPLEEKNETKPQE*RDSGSR Trigger: GCGGGAACCACTATCTCTGCACTCCTGGGGTTTTGT...TTCATTTTTCTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CCA 90 bp | ATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGCAGTATGTTTTCTCTTaGGAACGAATTGCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: IGKRHNPTVSWERLPLEEQYVFS*ERIAEP Trigger: AGGCTCTGCAATTCGTTCCCAAGAGAAAACATACTG...CTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR TCA 90 bp | AGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGAAAAATGAATCAAATGTTCTCATTTaGGCCACGTGTTCTGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RHNPTVSWERLPLEEKNESNVLI*ATCSVH Trigger: GTGCACAGAACACGTGGCTCAAATGAGAACATTTGA...TTCATTTTTCTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR GCA 90 bp | AGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGAAAAATGAAGTTCTGGTACTTCTCTaGCAAGCAATCTCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: RHNPTVSWERLPLEEKNEVLVLL*QAISTS Trigger: AGATGTGGAGATTGCTTGGCAGAGAAGTACCAGAAC...TTCATTTTTCTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR GCA 90 bp | TACTTTTTAAGCCATCAAATGTTCTCATTTGAGCCACGTGTTCTGTGCACATTCGAGCCACGTGTTCTGTaGACATTCAGAGAACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFLSHQMFSFEPRVLCTFEPRVL*TFREPF Trigger: AAAAGGTTCTCTGAATGTGCACAGAACACGTGGCTC...GAATGTGCACAGAACACGTGGCTCAAATGAGAACATTTGATGGCTTAAAAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR GCA 90 bp | ATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGGATCTTCATCCTTACTaGTTGAGATTGTTGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: IGKRHNPTVSWERLPLEEDLHPY*LRLLKH Trigger: GTGTTTCAACAATCTCAAGCAGTAAGGATGAAGATC...CTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CCA 90 bp | ATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGAGGATAAGTAACAGCTaGTATTTTGGAAGACATGTA | + |
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Preference number: 4 (lower is better) Translates to: IGKRHNPTVSWERLPLEERISNS*YFGRHV Trigger: TACATGTCTTCCAAAATACCAGCTGTTACTTATCCT...CTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CCA 90 bp | ATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGTCACTTTCTAAAAGCTaGGAAACAGTATTCTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: IGKRHNPTVSWERLPLEESLSKS*ETVFCN Trigger: ATTGCAGAATACTGTTTCCCAGCTTTTAGAAAGTGA...CTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CCA 90 bp | TACTTTTTAAGCCATCAAATGTTCTCATTTGAGCCACGTGTTCTGTGCACATTCAACCCTACAGTCAGTTaGGAAAGACTACCTTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: YFLSHQMFSFEPRVLCTFNPTVS*ERLPLE Trigger: TTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTT...GAATGTGCACAGAACACGTGGCTCAAATGAGAACATTTGATGGCTTAAAAAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR TCA 90 bp | TACTTTTTAAGCCATCAAATGTTCTCATTTGAGCCACGTGTTCTGTGCACATTCTTATTTCTCTTCCTATaGAGGGTAAATGGCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: YFLSHQMFSFEPRVLCTFLFLFL*RVNGTK Trigger: TTTGGTGCCATTTACCCTTCATAGGAAGAGAAATAA...GAATGTGCACAGAACACGTGGCTCAAATGAGAACATTTGATGGCTTAAAAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS CCA 90 bp | GAGTGCAGAGATAGTGGTTCCCGCTGGCGCAAAGAACAGGGACCCTaGAGGACGAAGGACTCCGACGTACGGACGCCCAGGGATCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: ECRDSGSRWRKEQGP*RTKDSDVRTPRDPR Trigger: GCGCGGATCCCTGGGCGTCCGTACGTCGGAGTCCTTCGTCCTCCAGGGTCCCTGTTCTTTGCGCCAGCGGGAACCACTATCTCTGCACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | AAGGGGTGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCTTCAGCCGTTTTGCCTaGGCTAGGGATGTGCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: KGCRASKPTPGHHPLGTSFSRFA*ARDVPG Trigger: GCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGAA...GGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCACCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | GGGGTGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATCCAGGTTCAGCCGTTTaGCCTTGGCTAGGGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: GVQSFQAHPRAPPSRNLHPGSAV*PWLGMC Trigger: GCACATCCCTAGCCAAGGCAAAACGGCTGAACCTGG...ATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS CCA 90 bp | AGCCATGTAACAAAACCCCAGGAGTGCAGAGATAGTGGTTCCCGCTaGCGCAAAGAACAGGGACCCTGGAGGACGAAGGACTCCGACGTA | + |
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Preference number: 5 (lower is better) Translates to: SHVTKPQECRDSGSR*RKEQGPWRTKDSDV Trigger: TACGTCGGAGTCCTTCGTCCTCCAGGGTCCCTGTTCTTTGCGCCAGCGGGAACCACTATCTCTGCACTCCTGGGGTTTTGTTACATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | GGGGTGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATGAATTGCAGAGCCTCTaGCCAATTACCATTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: GVQSFQAHPRAPPSRNLHELQSL*PITIVF Trigger: AAAAACAATGGTAATTGGCAAGAGGCTCTGCAATTC...ATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | AAGGGGTGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCCTTCATCCTTACTGCTaGAGATTGTTGAAACACATT | + |
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Preference number: 5 (lower is better) Translates to: KGCRASKPTPGHHPLGTSLHPYC*RLLKHI Trigger: AATGTGTTTCAACAATCTCAAGCAGTAAGGATGAAG...GGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCACCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | TGCAGAGCTTCCAAGCCCACCCCAGGGCACCACCCTCTAGGAACCTCCATAAAACCAGTATGTTTTCTCTaGGGAACGAATTGCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: CRASKPTPGHHPLGTSIKPVCFL*GTNCRA Trigger: GGCTCTGCAATTCGTTCCCAAGAGAAAACATACTGG...TTTTATGGAGGTTCCTAGAGGGTGGTGCCCTGGGGTGGGCTTGGAAGCTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS CCA 90 bp | TATCTAATGGAAGGCATTCAGTTGCCAGGTTCAGCCGTTTTGCCTTaGCTAGGGATGTGCCTGGCTGCATACTCTTATCAACAAAAGACC | + |
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Preference number: 5 (lower is better) Translates to: YLMEGIQLPGSAVLP*LGMCLAAYSYQQKT Trigger: GGTCTTTTGTTGATAAGAGTATGCAGCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGAACCTGGCAACTGAATGCCTTCCATTAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS GCA 90 bp | GGCATTCAGTTGCCAGGTTCAGCCGTTTTGCCTTGGCTAGGGATGTaGCTGGCTGCATACTCTTATCAACAAAAGACCCAATTACATAAA | + |
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Preference number: 5 (lower is better) Translates to: GIQLPGSAVLPWLGM*LAAYSYQQKTQLHK Trigger: TTTATGTAATTGGGTCTTTTGTTGATAAGAGTATGCAGCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGAACCTGGCAACTGAATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS CCA 90 bp | AATTTTCGTAAGCCATGTCAAAAACCAAAGGTTGTCCAAACTGCATaGCCTGGGCACCCTTCCAGCCCATTGCTATGTCCATATTCCTAT | + |
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Preference number: 5 (lower is better) Translates to: NFRKPCQKPKVVQTA*PGHPSSPLLCPYSY Trigger: ATAGGAATATGGACATAGCAATGGGCTGGAAGGGTGCCCAGGCCATGCAGTTTGGACAACCTTTGGTTTTTGACATGGCTTACGAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000309922.7 ENST00000495642.1 |
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| CDS-3UTR CAA 90 bp | ATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGATGGAAGGCATTCAGTaGCCAGGTTCAGCCGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: IGKRHNPTVSWERLPLEEMEGIQ*PGSAVL Trigger: CAAAACGGCTGAACCTGGCAACTGAATGCCTTCCAT...CTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | ATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGCAACCCTACAGTCAGTaGGGAAAGACTACCTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: IGKRHNPTVSWERLPLEEQPYSQ*GKTTFR Trigger: TCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTG...CTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | AGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGAAAAATGAAGTCAAAAACCAAAGGTaGTCCAAACTGCATGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RHNPTVSWERLPLEEKNEVKNQR*SKLHGL Trigger: CAGGCCATGCAGTTTGGACAACCTTTGGTTTTTGAC...TTCATTTTTCTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | TTTAATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGATCTCTTGGGAACGAATaGCAGAGCCTCTTGCCAATT | + |
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Preference number: 5 (lower is better) Translates to: FNWEKTQPYSQLGKTTFRSLGNE*QSLLPI Trigger: AATTGGCAAGAGGCTCTGCAATTCGTTCCCAAGAGA...TCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | TTTAATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAGTAACAGCTGGTATTTaGGAAGACATGTATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: FNWEKTQPYSQLGKTTFRVTAGI*EDMYLC Trigger: GCAGAGATACATGTCTTCCAAAATACCAGCTGTTAC...TCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | TTTAATTGGGAAAAGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGACATTCCATAAGGGTTTaGAGCTCTTCTTCAGTGATG | + |
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Preference number: 5 (lower is better) Translates to: FNWEKTQPYSQLGKTTFRHSIRV*SSSSVM Trigger: CATCACTGAAGAAGAGCTCAAAACCCTTATGGAATG...TCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCTTTTCCCAATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS-3UTR CAA 90 bp | AGACACAACCCTACAGTCAGTTGGGAAAGACTACCTTTAGAAGAGAAAAATGAACCTTACTGCTTGAGATaGTTGAAACACATTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: RHNPTVSWERLPLEEKNEPYCLR*LKHILL Trigger: AAGAAGAATGTGTTTCAACAATCTCAAGCAGTAAGG...TTCATTTTTCTCTTCTAAAGGTAGTCTTTCCCAACTGACTGTAGGGTTGTGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS CCA 72 bp | GATAGTGGTTCCCGCTGGCGCAAAGAACAGGGACCCTaGAGGACGAAGGACTCCGACGTACGGACGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: DSGSRWRKEQGP*RTKDSDVRTPR Trigger: CCTGGGCGTCCGTACGTCGGAGTCCTTCGTCCTCCAGGGTCCCTGTTCTTTGCGCCAGCGGGAACCACTATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS CCA 72 bp | ACAAAACCCCAGGAGTGCAGAGATAGTGGTTCCCGCTaGCGCAAAGAACAGGGACCCTGGAGGACGAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: TKPQECRDSGSR*RKEQGPWRTKD Trigger: GTCCTTCGTCCTCCAGGGTCCCTGTTCTTTGCGCCAGCGGGAACCACTATCTCTGCACTCCTGGGGTTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS CAA 72 bp | GGAAGGCATTCAGTTGCCAGGTTCAGCCGTTTTGCCTaGGCTAGGGATGTGCCTGGCTGCATACTCTTATCA | + |
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Preference number: 6 (lower is better) Translates to: GRHSVARFSRFA*ARDVPGCILLS Trigger: TGATAAGAGTATGCAGCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGAACCTGGCAACTGAATGCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS CAA 72 bp | CTAATGGAAGGCATTCAGTTGCCAGGTTCAGCCGTTTaGCCTTGGCTAGGGATGTGCCTGGCTGCATACTCT | + |
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Preference number: 6 (lower is better) Translates to: LMEGIQLPGSAV*PWLGMCLAAYS Trigger: AGAGTATGCAGCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGAACCTGGCAACTGAATGCCTTCCATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS CCA 72 bp | GAAGGCATTCAGTTGCCAGGTTCAGCCGTTTTGCCTTaGCTAGGGATGTGCCTGGCTGCATACTCTTATCAA | + |
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Preference number: 6 (lower is better) Translates to: EGIQLPGSAVLP*LGMCLAAYSYQ Trigger: TTGATAAGAGTATGCAGCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGAACCTGGCAACTGAATGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS GCA 72 bp | TTGCCAGGTTCAGCCGTTTTGCCTTGGCTAGGGATGTaGCTGGCTGCATACTCTTATCAACAAAAGACCCAA | + |
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Preference number: 6 (lower is better) Translates to: LPGSAVLPWLGM*LAAYSYQQKTQ Trigger: TTGGGTCTTTTGTTGATAAGAGTATGCAGCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGAACCTGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS TCA 72 bp | CTGGTACTTCTCTGCCAAGCAATCTCCACATCTCAATaGACTCTCTGGTGGCAGCTAGAGGATCTTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: LVLLCQAISTSQ*TLWWQLEDLHP Trigger: AGGATGAAGATCCTCTAGCTGCCACCAGAGAGTTCATTGAGATGTGGAGATTGCTTGGCAGAGAAGTACCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309922.7 ENST00000495642.1 |
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| CDS CCA 72 bp | ATGTCAAAAACCAAAGGTTGTCCAAACTGCATGGCCTaGGCACCCTTCCAGCCCATTGCTATGTCCATATTC | + |
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Preference number: 6 (lower is better) Translates to: MSKTKGCPNCMA*APFQPIAMSIF Trigger: GAATATGGACATAGCAATGGGCTGGAAGGGTGCCCAGGCCATGCAGTTTGGACAACCTTTGGTTTTTGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000309922.7 ENST00000495642.1 |
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| CDS CAA 90 bp | TTATCTAATGGAAGGCATTCAGTTGCCAGGTTCAGCCGTTTTGCCTaGGCTAGGGATGTGCCTGGCTGCATACTCTTATCAACAAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSNGRHSVARFSRFA*ARDVPGCILLSTKD Trigger: GTCTTTTGTTGATAAGAGTATGCAGCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGAACCTGGCAACTGAATGCCTTCCATTAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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| CDS CAA 90 bp | AATATTTATCTAATGGAAGGCATTCAGTTGCCAGGTTCAGCCGTTTaGCCTTGGCTAGGGATGTGCCTGGCTGCATACTCTTATCAACAA | + |
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Preference number: 6 (lower is better) Translates to: NIYLMEGIQLPGSAV*PWLGMCLAAYSYQQ Trigger: TTGTTGATAAGAGTATGCAGCCAGGCACATCCCTAGCCAAGGCAAAACGGCTGAACCTGGCAACTGAATGCCTTCCATTAGATAAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309922.7 |
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