RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRMT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104907

Ensembl transcript IDs: ENST00000221504.12, ENST00000357720.9, ENST00000437766.5, ENST00000585622.1, ENST00000586224.5, ENST00000587633.1, ENST00000588229.1, ENST00000588511.5, ENST00000588746.5, ENST00000590812.5, ENST00000591425.5, ENST00000591717.5, ENST00000592062.5, ENST00000592606.1, ENST00000592729.1, ENST00000592814.5, ENST00000592892.1

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp CGCTGTTCCCCGCCAACACCGCCATGTCTGTGCAGGTCACACACAGCAACCCTCGGTGGGCCACGTCATTaGGCTGGACATTCCGGCGTA +
Preference number: 4 (lower is better)
Translates to: RCSPPTPPCLCRSHTATLGGPRH*AGHSGV
Trigger: TACGCCGGAATGTCCAGCTCAATGACGTGGCCCACC...GAGGGTTGCTGTGTGTGACCTGCACAGACATGGCGGTGTTGGCGGGGAACAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587633.1
CDS-3UTR GCA 90 bp TCCCCGCCAACACCGCCATGTCTGTGCAGGTCACACACAGCAACCCTCCTTCACCCATGGCCCCGTACTTaGTGTAGCACGTCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SPPTPPCLCRSHTATLLHPWPRT*CSTSPR
Trigger: GCGGGGAGACGTGCTACAGCAAGTACGGGGCCATGG...GTGAAGGAGGGTTGCTGTGTGTGACCTGCACAGACATGGCGGTGTTGGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587633.1
CDS-3UTR GCA 90 bp TCCCCGCCAACACCGCCATGTCTGTGCAGGTCACACACAGCAACCCTCCTTCACACACCGCCATGTCTGTaGAGGTCACACACAGCAACC +
Preference number: 4 (lower is better)
Translates to: SPPTPPCLCRSHTATLLHTPPCL*RSHTAT
Trigger: GGTTGCTGTGTGTGACCTGCACAGACATGGCGGTGT...GTGAAGGAGGGTTGCTGTGTGTGACCTGCACAGACATGGCGGTGTTGGCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587633.1
CDS-3UTR CCA 90 bp TGTTCCCCGCCAACACCGCCATGTCTGTGCAGGTCACACACAGCAACCCTCCTTCCTGGAACCTTGATCTaGATTCCTTTGGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: CSPPTPPCLCRSHTATLLPGTLI*IPLAPS
Trigger: GCTTGGGGCCAAAGGAATCCAGATCAAGGTTCCAGG...AAGGAGGGTTGCTGTGTGTGACCTGCACAGACATGGCGGTGTTGGCGGGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587633.1
CDS GCA 90 bp ACCCGGGCGGAGCGGAAAGTGAGGCTTAGCCACAGAGACGATCCTTaGATGAGACATCCGCTGGCGCCTCCGCCCGCCAAGCCTGGTTCG +
Preference number: 5 (lower is better)
Translates to: TRAERKVRLSHRDDP*MRHPLAPPPAKPGS
Trigger: CGAACCAGGCTTGGCGGGCGGAGGCGCCAGCGGATGTCTCATGCAAGGATCGTCTCTGTGGCTAAGCCTCACTTTCCGCTCCGCCCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221504.12
ENST00000437766.5
ENST00000592729.1
CDS GCA 90 bp ACCCGGGCGGAGCGGAAAGTGAGGCTTAGCCACAGAGACGATCCTTaGATGAGACATCCGCTGGCGCCTCCGCCCGCCAAGCCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: TRAERKVRLSHRDDP*MRHPLAPPPAKPAL
Trigger: GAGAGCAGGCTTGGCGGGCGGAGGCGCCAGCGGATGTCTCATGCAAGGATCGTCTCTGTGGCTAAGCCTCACTTTCCGCTCCGCCCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357720.9
ENST00000585622.1
ENST00000586224.5
ENST00000588229.1
ENST00000588511.5
ENST00000588746.5
ENST00000591425.5
ENST00000591717.5
ENST00000592062.5
ENST00000592606.1
ENST00000592814.5
ENST00000592892.1
CDS-3UTR CAA 90 bp CCGCTGTTCCCCGCCAACACCGCCATGTCTGTGCAGGTCACACACAGCAACCCTAGGTGGGCCACGTCATaGAGCTGGACATTCCGGCGT +
Preference number: 5 (lower is better)
Translates to: PLFPANTAMSVQVTHSNPRWATS*SWTFRR
Trigger: ACGCCGGAATGTCCAGCTCAATGACGTGGCCCACCT...AGGGTTGCTGTGTGTGACCTGCACAGACATGGCGGTGTTGGCGGGGAACAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587633.1
CDS CCA 90 bp CTGAAGGAGCAGAACCCAGGGCCTGCTATGTGGCTGAAGCCCCTCTaGATTTGGGCGGCAGAAGAGCCCAGGCAGGGAGATAAACTTGTG +
Preference number: 5 (lower is better)
Translates to: LKEQNPGPAMWLKPL*IWAAEEPRQGDKLV
Trigger: CACAAGTTTATCTCCCTGCCTGGGCTCTTCTGCCGCCCAAATCCAGAGGGGCTTCAGCCACATAGCAGGCCCTGGGTTCTGCTCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585622.1
ENST00000590812.5
CDS-3UTR CAA 90 bp TCCCCGCCAACACCGCCATGTCTGTGCAGGTCACACACAGCAACCCTCCTTCACTTCTCTCCTGGAACCTaGATCTGGATTCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: SPPTPPCLCRSHTATLLHFSPGT*IWIPLA
Trigger: GGCCAAAGGAATCCAGATCAAGGTTCCAGGAGAGAA...GTGAAGGAGGGTTGCTGTGTGTGACCTGCACAGACATGGCGGTGTTGGCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587633.1
CDS CCA 90 bp GGGAGAGGACACGTCCCTAGTCCCATTTCACAGATGAGGAAGTTGTaGCTCAGAAAAGGGGCGGTAAGCGGAGAAACCCAACACTTATTG +
Preference number: 5 (lower is better)
Translates to: GRGHVPSPISQMRKL*LRKGAVSGETQHLL
Trigger: CAATAAGTGTTGGGTTTCTCCGCTTACCGCCCCTTTTCTGAGCCACAACTTCCTCATCTGTGAAATGGGACTAGGGACGTGTCCTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS CCA 90 bp GGAGTTGGATTTACCGGGTTTGAATCTCAGTCCCATCACATGCTCTaGGCAGGTTACTCCCGCGGCTTCACTTTTCTTACCATCACTTCC +
Preference number: 5 (lower is better)
Translates to: GVGFTGFESQSHHML*AGYSRGFTFLTITS
Trigger: GGAAGTGATGGTAAGAAAAGTGAAGCCGCGGGAGTAACCTGCCCAGAGCATGTGATGGGACTGAGATTCAAACCCGGTAAATCCAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS GCA 90 bp TCTTCTGTGTTCTGGGTGCTATATACACATTATTTCAGAGCACCCTaGAGGAATGACTCAGGCTCTGGAGTTGGATTTACCGGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: SSVFWVLYTHYFRAP*RNDSGSGVGFTGFE
Trigger: TTCAAACCCGGTAAATCCAACTCCAGAGCCTGAGTCATTCCTGCAGGGTGCTCTGAAATAATGTGTATATAGCACCCAGAACACAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS GCA 90 bp AAGCGGAGAAACCCAACACTTATTGGTCCTCTTCTGTGTTCTGGGTaGTATATACACATTATTTCAGAGCACCCTGCAGGAATGACTCAG +
Preference number: 5 (lower is better)
Translates to: KRRNPTLIGPLLCSG*YIHIISEHPAGMTQ
Trigger: CTGAGTCATTCCTGCAGGGTGCTCTGAAATAATGTGTATATAGCACCCAGAACACAGAAGAGGACCAATAAGTGTTGGGTTTCTCCGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS GCA 72 bp TCTCCCCGCTGTTCCCCGCCAACACCGCCATGTCTGTaGAGGTCACACACAGCAACCAGCCTGCACAGCTGC +
Preference number: 6 (lower is better)
Translates to: SPRCSPPTPPCL*RSHTATSLHSC
Trigger: GCAGCTGTGCAGGCTGGTTGCTGTGTGTGACCTGCACAGACATGGCGGTGTTGGCGGGGAACAGCGGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588511.5
CDS GCA 72 bp GAGCGGAAAGTGAGGCTTAGCCACAGAGACGATCCTTaGATGAGACATCCGCTGGCGCCTCCGCCCGCCAAG +
Preference number: 6 (lower is better)
Translates to: ERKVRLSHRDDP*MRHPLAPPPAK
Trigger: CTTGGCGGGCGGAGGCGCCAGCGGATGTCTCATGCAAGGATCGTCTCTGTGGCTAAGCCTCACTTTCCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000221504.12
ENST00000357720.9
ENST00000437766.5
ENST00000585622.1
ENST00000586224.5
ENST00000588229.1
ENST00000588511.5
ENST00000588746.5
ENST00000591425.5
ENST00000591717.5
ENST00000592062.5
ENST00000592606.1
ENST00000592729.1
ENST00000592814.5
ENST00000592892.1
CDS CCA 72 bp CAGAACCCAGGGCCTGCTATGTGGCTGAAGCCCCTCTaGATTTGGGCGGCAGAAGAGCCCAGGCAGGGAGAT +
Preference number: 6 (lower is better)
Translates to: QNPGPAMWLKPL*IWAAEEPRQGD
Trigger: ATCTCCCTGCCTGGGCTCTTCTGCCGCCCAAATCCAGAGGGGCTTCAGCCACATAGCAGGCCCTGGGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585622.1
ENST00000588229.1
ENST00000590812.5
CDS CAA 72 bp TTTGGGCGGCAGAAGAGCCCAGGCAGGGAGATAAACTaGTGTGACCCCCGCCCACCAGAAGCCTGGACCTCC +
Preference number: 6 (lower is better)
Translates to: FGRQKSPGREIN*CDPRPPEAWTS
Trigger: GGAGGTCCAGGCTTCTGGTGGGCGGGGGTCACACAAGTTTATCTCCCTGCCTGGGCTCTTCTGCCGCCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000585622.1
ENST00000588229.1
ENST00000590812.5
CDS CAA 90 bp CCCTCTGGATTTGGGCGGCAGAAGAGCCCAGGCAGGGAGATAAACTaGTGTGACCCCCGCCCACCAGAAGCCTGGACCTCCACTCACTCT +
Preference number: 6 (lower is better)
Translates to: PSGFGRQKSPGREIN*CDPRPPEAWTSTHS
Trigger: AGAGTGAGTGGAGGTCCAGGCTTCTGGTGGGCGGGGGTCACACAAGTTTATCTCCCTGCCTGGGCTCTTCTGCCGCCCAAATCCAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000585622.1
ENST00000588229.1
ENST00000590812.5
CDS CCA 72 bp CCAGGGCCTGCTATGTGGCTGAAGCCCCTCTGGATTTaGGCGGCAGAAGAGCCCAGGCAGGGAGATAAACTT +
Preference number: 6 (lower is better)
Translates to: PGPAMWLKPLWI*AAEEPRQGDKL
Trigger: AAGTTTATCTCCCTGCCTGGGCTCTTCTGCCGCCCAAATCCAGAGGGGCTTCAGCCACATAGCAGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585622.1
ENST00000588229.1
ENST00000590812.5
CDS CCA 72 bp TTGGCACAGTGGGTGGGCGAATCACATGATAGTGGTTaGCCAGTCAATGAGGAAACGTACGGTGGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: LAQWVGESHDSG*PVNEETYGGRP
Trigger: CGGCCGCCCACCGTACGTTTCCTCATTGACTGGCCAACCACTATCATGTGATTCGCCCACCCACTGTGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS CAA 90 bp CCTGGGAGAGGACACGTCCCTAGTCCCATTTCACAGATGAGGAAGTaGTGGCTCAGAAAAGGGGCGGTAAGCGGAGAAACCCAACACTTA +
Preference number: 6 (lower is better)
Translates to: PGRGHVPSPISQMRK*WLRKGAVSGETQHL
Trigger: TAAGTGTTGGGTTTCTCCGCTTACCGCCCCTTTTCTGAGCCACAACTTCCTCATCTGTGAAATGGGACTAGGGACGTGTCCTCTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS TCA 72 bp GCCGGGATCAAAATGAAAGCCATAAAGGAAGCGCGCTaGTCGTGCTGTTCCGGGGGTGTTAATCACAGTGGA +
Preference number: 6 (lower is better)
Translates to: AGIKMKAIKEAR*SCCSGGVNHSG
Trigger: TCCACTGTGATTAACACCCCCGGAACAGCACGATCAGCGCGCTTCCTTTATGGCTTTCATTTTGATCCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS CCA 72 bp CACGTCCCTAGTCCCATTTCACAGATGAGGAAGTTGTaGCTCAGAAAAGGGGCGGTAAGCGGAGAAACCCAA +
Preference number: 6 (lower is better)
Translates to: HVPSPISQMRKL*LRKGAVSGETQ
Trigger: TTGGGTTTCTCCGCTTACCGCCCCTTTTCTGAGCCACAACTTCCTCATCTGTGAAATGGGACTAGGGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS CCA 72 bp TTTACCGGGTTTGAATCTCAGTCCCATCACATGCTCTaGGCAGGTTACTCCCGCGGCTTCACTTTTCTTACC +
Preference number: 6 (lower is better)
Translates to: FTGFESQSHHML*AGYSRGFTFLT
Trigger: GGTAAGAAAAGTGAAGCCGCGGGAGTAACCTGCCCAGAGCATGTGATGGGACTGAGATTCAAACCCGGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS CAA 72 bp TCAGAGCACCCTGCAGGAATGACTCAGGCTCTGGAGTaGGATTTACCGGGTTTGAATCTCAGTCCCATCACA +
Preference number: 6 (lower is better)
Translates to: SEHPAGMTQALE*DLPGLNLSPIT
Trigger: TGTGATGGGACTGAGATTCAAACCCGGTAAATCCAACTCCAGAGCCTGAGTCATTCCTGCAGGGTGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS CAA 90 bp CACATTATTTCAGAGCACCCTGCAGGAATGACTCAGGCTCTGGAGTaGGATTTACCGGGTTTGAATCTCAGTCCCATCACATGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: HIISEHPAGMTQALE*DLPGLNLSPITCSG
Trigger: CCCAGAGCATGTGATGGGACTGAGATTCAAACCCGGTAAATCCAACTCCAGAGCCTGAGTCATTCCTGCAGGGTGCTCTGAAATAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS CAA 72 bp AGAAAAGGGGCGGTAAGCGGAGAAACCCAACACTTATaGGTCCTCTTCTGTGTTCTGGGTGCTATATACACA +
Preference number: 6 (lower is better)
Translates to: RKGAVSGETQHL*VLFCVLGAIYT
Trigger: TGTGTATATAGCACCCAGAACACAGAAGAGGACCAATAAGTGTTGGGTTTCTCCGCTTACCGCCCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS CAA 90 bp TTGTGGCTCAGAAAAGGGGCGGTAAGCGGAGAAACCCAACACTTATaGGTCCTCTTCTGTGTTCTGGGTGCTATATACACATTATTTCAG +
Preference number: 6 (lower is better)
Translates to: LWLRKGAVSGETQHL*VLFCVLGAIYTLFQ
Trigger: CTGAAATAATGTGTATATAGCACCCAGAACACAGAAGAGGACCAATAAGTGTTGGGTTTCTCCGCTTACCGCCCCTTTTCTGAGCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS GCA 72 bp ACTCCCGCGGCTTCACTTTTCTTACCATCACTTCCTTaGTGTGTGATGATCTTGACCAGCTTTCTTCATTTC +
Preference number: 6 (lower is better)
Translates to: TPAASLFLPSLP*CVMILTSFLHF
Trigger: GAAATGAAGAAAGCTGGTCAAGATCATCACACAGCAAGGAAGTGATGGTAAGAAAAGTGAAGCCGCGGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS GCA 72 bp TTCTGGGTGCTATATACACATTATTTCAGAGCACCCTaGAGGAATGACTCAGGCTCTGGAGTTGGATTTACC +
Preference number: 6 (lower is better)
Translates to: FWVLYTHYFRAP*RNDSGSGVGFT
Trigger: GGTAAATCCAACTCCAGAGCCTGAGTCATTCCTGCAGGGTGCTCTGAAATAATGTGTATATAGCACCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS GCA 72 bp AACCCAACACTTATTGGTCCTCTTCTGTGTTCTGGGTaGTATATACACATTATTTCAGAGCACCCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: NPTLIGPLLCSG*YIHIISEHPAG
Trigger: TCCTGCAGGGTGCTCTGAAATAATGTGTATATAGCACCCAGAACACAGAAGAGGACCAATAAGTGTTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592062.5
CDS CCA 72 bp GAGAAACCCAACACTTATTGGTCCTCTTCTGTGTTCTaGGTGCTATATACACATTATTTCAGAGCACCCTGC +
Preference number: 6 (lower is better)
Translates to: EKPNTYWSSSVF*VLYTHYFRAPC
Trigger: GCAGGGTGCTCTGAAATAATGTGTATATAGCACCCAGAACACAGAAGAGGACCAATAAGTGTTGGGTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592062.5