RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000043514

Ensembl transcript IDs: ENST00000316891.10, ENST00000372818.5, ENST00000441669.6, ENST00000462243.2, ENST00000462797.5, ENST00000467774.1, ENST00000469476.2, ENST00000486825.6, ENST00000489945.5, ENST00000491865.5, ENST00000492612.6, ENST00000495175.6, ENST00000537440.5, ENST00000541099.5, ENST00000648678.1

Found 1055 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTaGACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCT +
Preference number: 1 (lower is better)
Translates to: STPLPRLGDKHTPPS*TGSPPPFQRPLDMS
Trigger: AGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
3UTR TCA 90 bp GTGTCCGTGGCAGTGGGCAGATCCCAGAGCTCTGAGTGCTGGCTGTaGTGTCCCAACATAGCTGTCTACAAGCAAAAGGAAAAGCTGCCC +
Preference number: 1 (lower is better)
Translates to: VSVAVGRSQSSECWL*CPNIAVYKQKEKLP
Trigger: GGGCAGCTTTTCCTTTTGCTTGTAGACAGCTATGTTGGGACATCACAGCCAGCACTCAGAGCTCTGGGATCTGCCCACTGCCACGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR GCA 90 bp GTGATGGACTGGAGGCTCTGGATACCTGGACTGGAGGGCTCTGCTTaGCTTGGGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTC +
Preference number: 1 (lower is better)
Translates to: VMDWRLWIPGLEGSA*LGIAMARWYKMAFL
Trigger: GAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTCCAGTCCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR GCA 90 bp GCCAAAGATCCCATCCTTTTAAGGCTCCATCCTTTTGGGCTGCCTTaGTGTAGGGTGGCCCTGAGTGTGCTAATCAGCAGCAGTGTCCGT +
Preference number: 1 (lower is better)
Translates to: AKDPILLRLHPFGLP*CRVALSVLISSSVR
Trigger: ACGGACACTGCTGCTGATTAGCACACTCAGGGCCACCCTACAGCAAGGCAGCCCAAAAGGATGGAGCCTTAAAAGGATGGGATCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR TCA 90 bp CTAATCAGCAGCAGTGTCCGTGGCAGTGGGCAGATCCCAGAGCTCTaGGTGCTGGCTGTGATGTCCCAACATAGCTGTCTACAAGCAAAA +
Preference number: 1 (lower is better)
Translates to: LISSSVRGSGQIPEL*VLAVMSQHSCLQAK
Trigger: TTTTGCTTGTAGACAGCTATGTTGGGACATCACAGCCAGCACTCAGAGCTCTGGGATCTGCCCACTGCCACGGACACTGCTGCTGATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR GCA 90 bp GAGGCTCTGGATACCTGGACTGGAGGGCTCTGCTTGCCTTGGGATTaGTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCC +
Preference number: 1 (lower is better)
Translates to: EALDTWTGGLCLPWD*YGQMVQNGIPHSHS
Trigger: GGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 90 bp TTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTaGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCAC +
Preference number: 1 (lower is better)
Translates to: FLLCREFRIALLCPD*ETNIPLPPELDPHH
Trigger: GTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
3UTR CCA 90 bp GGACTGGAGGCTCTGGATACCTGGACTGGAGGGCTCTGCTTGCCTTaGGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCT +
Preference number: 1 (lower is better)
Translates to: GLEALDTWTGGLCLP*DCYGQMVQNGIPHS
Trigger: AGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTCCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 90 bp CAAAGCCATTTAGATAGCACTGCTGGTGTGATGGACTGGAGGCTCTaGATACCTGGACTGGAGGGCTCTGCTTGCCTTGGGATTGCTATG +
Preference number: 1 (lower is better)
Translates to: QSHLDSTAGVMDWRL*IPGLEGSACLGIAM
Trigger: CATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTCCAGTCCATCACACCAGCAGTGCTATCTAAATGGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 90 bp CTTGCAAGCTCCTGGCCACTTTGCGTTTGTCATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCACCTGGCTTAGGCGTTTGTGAAGTA +
Preference number: 1 (lower is better)
Translates to: LASSWPLCVCHVDAA*QPFLGPPGLGVCEV
Trigger: TACTTCACAAACGCCTAAGCCAGGTGGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGAGCTTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR GCA 90 bp GTGGGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTaGCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGAT +
Preference number: 1 (lower is better)
Translates to: VGAFLLCREFRIALL*PDWETNIPLPPELD
Trigger: ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR GCA 90 bp TCAAAAACTTGCAAGCTCCTGGCCACTTTGCGTTTGTCATGTGGATaGAGCTTGGCAGCCATTTCTGGGTCCACCTGGCTTAGGCGTTTG +
Preference number: 1 (lower is better)
Translates to: SKTCKLLATLRLSCG*SLAAISGSTWLRRL
Trigger: CAAACGCCTAAGCCAGGTGGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CCA 90 bp TCTGGATACCTGGACTGGAGGGCTCTGCTTGCCTTGGGATTGCTATaGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCT +
Preference number: 1 (lower is better)
Translates to: SGYLDWRALLALGLL*PDGTKWHSSFSLQA
Trigger: AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 90 bp ATTAATTGCCAAAGCCATTTAGATAGCACTGCTGGTGTGATGGACTaGAGGCTCTGGATACCTGGACTGGAGGGCTCTGCTTGCCTTGGG +
Preference number: 1 (lower is better)
Translates to: INCQSHLDSTAGVMD*RLWIPGLEGSACLG
Trigger: CCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTCCAGTCCATCACACCAGCAGTGCTATCTAAATGGCTTTGGCAATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 90 bp CCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTG +
Preference number: 1 (lower is better)
Translates to: PLPPELDPHHLSKGH*TCLLNAAFQLLIIL
Trigger: CAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR GCA 90 bp TCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTTAAACGCTaGATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCTT +
Preference number: 1 (lower is better)
Translates to: SPPPFQRPLDMSLKR*ISALDHSALGIPSL
Trigger: AAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR GCA 90 bp ACAAGAGGATCCACAAAGCTGATCATGTGGTGCCGGCAGATTCTCTaGTCTTGGGCAGAAACCTTGTTGGTGATGATGTCTAGGCCTTCA +
Preference number: 1 (lower is better)
Translates to: TRGSTKLIMWCRQIL*SWAETLLVMMSRPS
Trigger: TGAAGGCCTAGACATCATCACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCACCACATGATCAGCTTTGTGGATCCTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CCA 90 bp GCCTCAATGGATTACACCTGCCTTGAAAACCACAACCTTGGATTATaGCTCAATATAATCACTGCTTGCTGCCCTCCACTGCCCTATGGA +
Preference number: 1 (lower is better)
Translates to: ASMDYTCLENHNLGL*LNIITACCPPLPYG
Trigger: TCCATAGGGCAGTGGAGGGCAGCAAGCAGTGATTATATTGAGCCATAATCCAAGGTTGTGGTTTTCAAGGCAGGTGTAATCCATTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CCA 90 bp GAGGTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATaGCATCTTTATTGGAGTGGCTGTAGGCTTGTGGCCCTGGATGAA +
Preference number: 1 (lower is better)
Translates to: EVTQVITSLVLSFIV*HLYWSGCRLVALDE
Trigger: TTCATCCAGGGCCACAAGCCTACAGCCACTCCAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR CCA 90 bp ACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTaGGGATCCCTTCTCTTTAGGTTCTTTGTTATGGTCTGGGGAAAC +
Preference number: 1 (lower is better)
Translates to: TCLLNAAFQLLIILP*GSLLFRFFVMVWGN
Trigger: GTTTCCCCAGACCATAACAAAGAACCTAAAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR TCA 90 bp ATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTaGGCAAATAGCCCAAAGCTCTATGGTACTTTTCAGCTCTCAAAT +
Preference number: 1 (lower is better)
Translates to: MARWYKMAFLILTPG*ANSPKLYGTFQLSN
Trigger: ATTTGAGAGCTGAAAAGTACCATAGAGCTTTGGGCTATTTGCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 90 bp ATGGTGTTGACAGCATCTGAGTCCAATCTTCTTCTTTTCTTCAGTTaGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCGCGA +
Preference number: 1 (lower is better)
Translates to: MVLTASESNLLLFFS*FKWDLDFMCAAHSR
Trigger: TCGCGAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGATGCTGTCAACACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR CCA 90 bp GTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATTaGAGTGGCTGTAGGCTTGTGGCCCTGGATGAAACTTTGCACGAT +
Preference number: 1 (lower is better)
Translates to: VITSLVLSFIVWHLY*SGCRLVALDETLHD
Trigger: ATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCACTCCAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR GCA 90 bp ACAGAAGCAGATGAACCTAATAGCTCACTGAGTATTGGAATTAATTaGCAAAGCCATTTAGATAGCACTGCTGGTGTGATGGACTGGAGG +
Preference number: 1 (lower is better)
Translates to: TEADEPNSSLSIGIN*QSHLDSTAGVMDWR
Trigger: CCTCCAGTCCATCACACCAGCAGTGCTATCTAAATGGCTTTGGCAATTAATTCCAATACTCAGTGAGCTATTAGGTTCATCTGCTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR TCA 90 bp ATGGTCTGGGGAAACACTCTGACTTTCTATGGTGTTGACAGCATCTaGGTCCAATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTT +
Preference number: 1 (lower is better)
Translates to: MVWGNTLTFYGVDSI*VQSSSFLQLVQVGF
Trigger: AAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGATGCTGTCAACACCATAGAAAGTCAGAGTGTTTCCCCAGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR CCA 90 bp AATTCTACACAGCTCTTACGGCCTTTGATACTGTCTTGCCTGGATTaGTGTTTGTGTACACATGCAATTATTTATAAGCTCCCTGAAGGC +
Preference number: 1 (lower is better)
Translates to: NSTQLLRPLILSCLD*CLCTHAIIYKLPEG
Trigger: GCCTTCAGGGAGCTTATAAATAATTGCATGTGTACACAAACACCAATCCAGGCAAGACAGTATCAAAGGCCGTAAGAGCTGTGTAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 90 bp AGTCTTTATGGCATCCATCTGCCTTTTTGTATTATGAACTTTCTCTaGGTGACACCCATGGCTTCTACAACCACTGTTGTGCTGATAACT +
Preference number: 1 (lower is better)
Translates to: SLYGIHLPFCIMNFL*VTPMASTTTVVLIT
Trigger: AGTTATCAGCACAACAGTGGTTGTAGAAGCCATGGGTGTCACCCAGAGAAAGTTCATAATACAAAAAGGCAGATGGATGCCATAAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR TCA 90 bp GTTCTTTGTTATGGTCTGGGGAAACACTCTGACTTTCTATGGTGTTaGCAGCATCTGAGTCCAATCTTCTTCTTTTCTTCAGTTGGTTCA +
Preference number: 1 (lower is better)
Translates to: VLCYGLGKHSDFLWC*QHLSPIFFFSSVGS
Trigger: TGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGATGCTGTCAACACCATAGAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR TCA 90 bp TTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTGATAGTCCTGGCTATTTTCCGAAAC +
Preference number: 1 (lower is better)
Translates to: FSLSDQVLVKFLEAN*LEDTMLIVLAIFRN
Trigger: GTTTCGGAAAATAGCCAGGACTATCAACATGGTATCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGTACCTGATCACTGAGGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR GCA 90 bp ACATCATTTCCAGACACATCAGCCACACAAGGAGCTGACAAGACCTaGTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATCAA +
Preference number: 1 (lower is better)
Translates to: TSFPDTSATQGADKT*CFYYRERETLKPHQ
Trigger: TTGATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTGGAAATGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR GCA 90 bp CTTGAAAACCACAACCTTGGATTATGGCTCAATATAATCACTGCTTaGTGCCCTCCACTGCCCTATGGATATCTTACTGAGATCATTAAT +
Preference number: 1 (lower is better)
Translates to: LENHNLGLWLNIITA*CPPLPYGYLTEIIN
Trigger: ATTAATGATCTCAGTAAGATATCCATAGGGCAGTGGAGGGCAGCAAGCAGTGATTATATTGAGCCATAATCCAAGGTTGTGGTTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR TCA 90 bp AAAGTCCTTCAATCACTTTCTTGCCTCAATGGATTACACCTGCCTTaGAAACCACAACCTTGGATTATGGCTCAATATAATCACTGCTTG +
Preference number: 1 (lower is better)
Translates to: KVLQSLSCLNGLHLP*KPQPWIMAQYNHCL
Trigger: CAAGCAGTGATTATATTGAGCCATAATCCAAGGTTGTGGTTTTCAAGGCAGGTGTAATCCATTGAGGCAAGAAAGTGATTGAAGGACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CCA 90 bp ATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGTaGCTCACAAATACTTCAGTCATCTACAAAAGCATCTGGAAATTA +
Preference number: 1 (lower is better)
Translates to: MALSCHSLKSRTPNM*LTNTSVIYKSIWKL
Trigger: TAATTTCCAGATGCTTTTGTAGATGACTGAAGTATTTGTGAGCCACATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR CCA 90 bp CTGATAACTCCCAAAATCCATATCCACAATCTAGTTCTCTTTTTGTaGTGCCAGACCTGTATATTCAACTGTCTAGTGGACATTCCATCA +
Preference number: 1 (lower is better)
Translates to: LITPKIHIHNLVLFL*CQTCIFNCLVDIPS
Trigger: TGATGGAATGTCCACTAGACAGTTGAATATACAGGTCTGGCACCACAAAAAGAGAACTAGATTGTGGATATGGATTTTGGGAGTTATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR TCA 90 bp TTACTGAGAGTTAGGAAGGATCAAGCCATATTCCTGGAATACAGATaGGCTGTTCTCTTGCTTAGCCCTAAGAATCAAGCAAAGTATTTT +
Preference number: 1 (lower is better)
Translates to: LLRVRKDQAIFLEYR*AVLLLSPKNQAKYF
Trigger: AAAATACTTTGCTTGATTCTTAGGGCTAAGCAAGAGAACAGCTCATCTGTATTCCAGGAATATGGCTTGATCCTTCCTAACTCTCAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR GCA 90 bp ATAACTCCCAAAATCCATATCCACAATCTAGTTCTCTTTTTGTGGTaGCAGACCTGTATATTCAACTGTCTAGTGGACATTCCATCATTG +
Preference number: 1 (lower is better)
Translates to: ITPKIHIHNLVLFLW*QTCIFNCLVDIPSL
Trigger: CAATGATGGAATGTCCACTAGACAGTTGAATATACAGGTCTGGCACCACAAAAAGAGAACTAGATTGTGGATATGGATTTTGGGAGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR GCA 90 bp ATCCTAAAGTCCTTCAATCACTTTCTTGCCTCAATGGATTACACCTaGCTTGAAAACCACAACCTTGGATTATGGCTCAATATAATCACT +
Preference number: 1 (lower is better)
Translates to: ILKSFNHFLASMDYT*LENHNLGLWLNIIT
Trigger: AGTGATTATATTGAGCCATAATCCAAGGTTGTGGTTTTCAAGGCAGGTGTAATCCATTGAGGCAAGAAAGTGATTGAAGGACTTTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR GCA 90 bp TCTCTCTTCAGAATCAAAGTACTTTCTACCCACTTACAACAGCACTaGCTGAACTGTGAGAAGTATCTAAAGCCTAATCAAGATTTTTAC +
Preference number: 1 (lower is better)
Translates to: SLFRIKVLSTHLQQH*LNCEKYLKPNQDFY
Trigger: GTAAAAATCTTGATTAGGCTTTAGATACTTCTCACAGTTCAGGCAGTGCTGTTGTAAGTGGGTAGAAAGTACTTTGATTCTGAAGAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 90 bp CAGAGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTaGTATTCACCACAAAGAAGATCCTCATGTATAAAAATGTGGAAT +
Preference number: 1 (lower is better)
Translates to: QSQGHKTSLKGCSQS*YSPQRRSSCIKMWN
Trigger: ATTCCACATTTTTATACATGAGGATCTTCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGA +
Preference number: 2 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTEDPQS*SCGAGR
Trigger: TCTGCCGGCACCACATGATCAGCTTTGTGGATCCTC...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTCATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 2 (lower is better)
Translates to: FRIALLCPDWETNIPLPPHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 2 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTSHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCCTGCATTTCAGCTCTTaGTCATTCTGCCCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTLHFSS*SFCPGD
Trigger: ATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAG...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATCTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 2 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTGGCTGTAGGCTTGTaGCCCTGGATGAAACTTTGC +
Preference number: 2 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHVAVGL*PWMKLC
Trigger: GCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACCATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 2 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCTGCATTTCAGCTCTTaGTCATTCTGCCCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: LCPDWETNIPLPPELDPHLHFSS*SFCPGD
Trigger: ATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAG...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp AGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAGAACCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 2 (lower is better)
Translates to: RAQQQACHPPSYPSAHLEPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...TTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTCTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 2 (lower is better)
Translates to: FRIALLCPDWETNIPLPPLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp GGAGCAGGCACAAAAGGGGAAATCTACTCAGGGCAATGCTTCAGACCAGAGCACCCCACCGGGAAGATGTaGCTTCCCACCTTGTTAGGT +
Preference number: 2 (lower is better)
Translates to: GAGTKGEIYSGQCFRPEHPTGKM*LPTLLG
Trigger: ACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGG...GTGCTCTGGTCTGAAGCATTGCCCTGAGTAGATTTCCCCTTTTGTGCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CAA 90 bp GGAGGCTCTGGATACCTGGACTGGAGGGCTCTGCTTGCCTTGGGATaGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTC +
Preference number: 2 (lower is better)
Translates to: GGSGYLDWRALLALG*LWPDGTKWHSSFSL
Trigger: GAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CAA 90 bp TGGACTGGAGGCTCTGGATACCTGGACTGGAGGGCTCTGCTTGCCTaGGGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTC +
Preference number: 2 (lower is better)
Translates to: WTGGSGYLDWRALLA*GLLWPDGTKWHSSF
Trigger: GAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTCCAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CAA 90 bp TGTGATGGACTGGAGGCTCTGGATACCTGGACTGGAGGGCTCTGCTaGCCTTGGGATTGCTATGGCCAGATGGTACAAAATGGCATTCCT +
Preference number: 2 (lower is better)
Translates to: CDGLEALDTWTGGLC*PWDCYGQMVQNGIP
Trigger: AGGAATGCCATTTTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTCCAGTCCATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTCTGCATTTCAGCTCTTaGTCATTCTGCCCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: FRIALLCPDWETNIPLPPLHFSS*SFCPGD
Trigger: ATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAG...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGATGGTGGGAGCTTTTCTaGTATGCAGAGAATTCCGCA +
Preference number: 2 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGWWELF*YAENSA
Trigger: TGCGGAATTCTCTGCATAGCAGAAAAGCTCCCACCA...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCGATTTGGATTTTATGTaGGCTGCCCATTCGCGATCC +
Preference number: 2 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTDLDFM*AAHSRS
Trigger: GGATCGCGAATGGGCAGCGCACATAAAATCCAAATC...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACTCATCTCAATGGAGATaGCCCTTTCCTGCCATTCAC +
Preference number: 2 (lower is better)
Translates to: LCPDWETNIPLPPELDPHSSQWR*PFPAIH
Trigger: GTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGA...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCGTGGCTGTAGGCTTGTaGCCCTGGATGAAACTTTGC +
Preference number: 2 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPVAVGL*PWMKLC
Trigger: GCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCCGCTACATAAATaGACAGACAGCATGATCTAC +
Preference number: 2 (lower is better)
Translates to: LCPDWETNIPLPPELDPHHPLHK*TDSMIY
Trigger: GTAGATCATGCTGTCTGTTCATTTATGTAGCGGGTG...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR TCA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACGACTTTCTATGGTGTTaGCAGCATCTGAGTCCAATC +
Preference number: 2 (lower is better)
Translates to: LCPDWETNIPLPPELDPHDFLWC*QHLSPI
Trigger: GATTGGACTCAGATGCTGTCAACACCATAGAAAGTC...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACGGAGCTTTTCTGCTATaGAGAGAATTCCGCATAGCA +
Preference number: 2 (lower is better)
Translates to: LCPDWETNIPLPPELDPHGAFLL*REFRIA
Trigger: TGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp CTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCTTACTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGG +
Preference number: 2 (lower is better)
Translates to: LKRCISALDHSALGIPSLTAWSA*SQRMQG
Trigger: CCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGT...AAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp CCACCCTCTTATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCCAAAGGATTGCCGGCAGATTCTCTaGTCTTGGGCAGAAACCTTG +
Preference number: 2 (lower is better)
Translates to: PPSYPSAHLELVSMKPKDCRQIL*SWAETL
Trigger: CAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCA...ATCCTTTGGCTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATAAGAGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486825.6
3UTR-3UTR CCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGCCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 2 (lower is better)
Translates to: QTHQPHKELTRPAVSIIEPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCT +
Preference number: 2 (lower is better)
Translates to: FRIALLCPDWETNIPLPPLSKGH*TCLLNA
Trigger: AGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAG...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp CTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 2 (lower is better)
Translates to: LLNAAFQLLIILPWGSLLSHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...GAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATGGTGTTGACAGCATCTaGGTCCAATCTTCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: ALLCPDWETNIPLPPELDGVDSI*VQSSSF
Trigger: AAAAGAAGAAGATTGGACTCAGATGCTGTCAACACC...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp TCCAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGCGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 2 (lower is better)
Translates to: SKGTTTFFRMLTMEKFTMRIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...CATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGTGGTGGGAGCTTTTCTaGTATGCAGAGAATTCCGCA +
Preference number: 2 (lower is better)
Translates to: GAFLLCREFRIALLCPDWWWELF*YAENSA
Trigger: TGCGGAATTCTCTGCATAGCAGAAAAGCTCCCACCA...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCGAGATGGCCCTTTCCTaGCATTCACTCAAATCTAGA +
Preference number: 2 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPEMALS*HSLKSR
Trigger: TCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTC...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGGTTCAAGTGGGATTTaGATTTTATGTGCGCTGCCC +
Preference number: 2 (lower is better)
Translates to: GAFLLCREFRIALLCPDWGSSGI*ILCALP
Trigger: GGGCAGCGCACATAAAATCCAAATCCCACTTGAACC...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp GGAGCAGGCACAAAAGGGGAAATCTACTCAGGGCAATGCTTCAGACCAGAGCACCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCT +
Preference number: 2 (lower is better)
Translates to: GAGTKGEIYSGQCFRPEHLSKGH*TCLLNA
Trigger: AGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAG...GTGCTCTGGTCTGAAGCATTGCCCTGAGTAGATTTCCCCTTTTGTGCCTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR TCA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 2 (lower is better)
Translates to: GADKTCCFYYRERETLKPHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 2 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQASHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR TCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATATAATAACTCACACATaGGCAGCTCGCAAATTTCAA +
Preference number: 2 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHIITHT*AARKFQ
Trigger: TTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTAT...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp AATGCTTCAGACCAGAGCACCAGGCAGATTTCTAGTGAGTGTTCTGCCTTTCCCAGCTCTTACGGCCTTTaGTACTGTCTTGCCTGGATT +
Preference number: 2 (lower is better)
Translates to: NASDQSTRQISSECSAFPSSYGL*YCLAWI
Trigger: AATCCAGGCAAGACAGTATCAAAGGCCGTAAGAGCT...GGGAAAGGCAGAACACTCACTAGAAATCTGCCTGGTGCTCTGGTCTGAAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR TCA 90 bp CCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCACTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGG +
Preference number: 2 (lower is better)
Translates to: PFFRSWLLVSSVHFPSVITAWSA*SQRMQG
Trigger: CCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGT...GATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGCGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 2 (lower is better)
Translates to: QTHQPHKELTRPAVSIIERIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGGAGCTTTTCTGCTATaGAGAGAATTCCGCATAGCA +
Preference number: 2 (lower is better)
Translates to: GAFLLCREFRIALLCPDWGAFLL*REFRIA
Trigger: TGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATACTTCTTTAAAGGGATaGAGTCAATCCTGGTATTCA +
Preference number: 2 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHTSLKG*SQSWYS
Trigger: TGAATACCAGGATTGACTGCATCCCTTTAAAGAAGT...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp CTCATCTCCACTCCCACCGGGAAGATGTGGCTTCCCACCTTGTTAGGTCCTAAAAATTGCTTTTCAAGGTaGAGCAGAAATGCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LISTPTGKMWLPTLLGPKNCFSR*SRNAPP
Trigger: AGGAGGAGCATTTCTGCTGCACCTTGAAAAGCAATT...TTTAGGACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGGAGTGGAGATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR GCA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTATCTACTCAGGGCAATaGTTCAGACCAGAGCACCAG +
Preference number: 2 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQAIYSGQ*FRPEHQ
Trigger: CTGGTGCTCTGGTCTGAAGCATTGCCCTGAGTAGAT...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR CCA 90 bp GCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: ACHPPSYPSAHLELVSMKQILCS*AETLLV
Trigger: CACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTG...CTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486825.6
3UTR CAA 90 bp AGGTTCTTCCCTACAAACTGCCAGCTTAACACAGTGCTTAATAGCTaGAGTCTACCAGCCTCACCTCAATTCCAGCTCTACCGCTTGCTA +
Preference number: 2 (lower is better)
Translates to: RFFPTNCQLNTVLNS*SLPASPQFQLYRLL
Trigger: TAGCAAGCGGTAGAGCTGGAATTGAGGTGAGGCTGGTAGACTCAAGCTATTAAGCACTGTGTTAAGCTGGCAGTTTGTAGGGAAGAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR TCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGACATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 2 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTAGACATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 2 (lower is better)
Translates to: FRAYLLVTCFRASIPFFRHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...TCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 2 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLSHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTATAATAACTCACACATaGGCAGCTCGCAAATTTCAA +
Preference number: 2 (lower is better)
Translates to: FRIALLCPDWETNIPLPPIITHT*AARKFQ
Trigger: TTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTAT...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp AACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCTTTAGGTCTGGGGAAACACTCTaGCTTTCTATGGTGTTGACA +
Preference number: 2 (lower is better)
Translates to: NAAFQLLIILPWGSLLFRSGETL*LSMVLT
Trigger: TGTCAACACCATAGAAAGTCAGAGTGTTTCCCCAGA...CCTAAAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTCGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 2 (lower is better)
Translates to: TSATQGADKTCCFYYRERRIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp TCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATACGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 2 (lower is better)
Translates to: SQWRWPFPAIHSNLELPIRIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...TATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp CAGAGCAGTTGCTCTATTTCTGAAGTCCACCACTGTGTAATTGGTCACAAGAGGAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: QSSCSISEVHHCVIGHKRKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...CCTCTTGTGACCAATTACACAGTGGTGGACTTCAGAAATAGAGCAACTGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp GGAGCAGGCACAAAAGGGGAAATCTACTCAGGGCAATGCTTCAGACCAGAGCACAGAACTCCCAATATGTaGCTCACAAATACTTCAGTC +
Preference number: 2 (lower is better)
Translates to: GAGTKGEIYSGQCFRPEHRTPNM*LTNTSV
Trigger: GACTGAAGTATTTGTGAGCCACATATTGGGAGTTCT...GTGCTCTGGTCTGAAGCATTGCCCTGAGTAGATTTCCCCTTTTGTGCCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR CCA 90 bp TCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTTTCAGTTGGTTCAAGTaGGATTTGGATTTTATGTGC +
Preference number: 2 (lower is better)
Translates to: SLLNWIPTTFPKATGHVSFSWFK*DLDFMC
Trigger: GCACATAAAATCCAAATCCCACTTGAACCAACTGAA...AGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR CAA 90 bp TCCAAAGGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTaGATCATTCTGCCCTGGGGATCCCTTCTCTTTAGGTTCTTTGTT +
Preference number: 2 (lower is better)
Translates to: SKGHWTCLLNAAFQL*IILPWGSLLFRFFV
Trigger: AACAAAGAACCTAAAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp CTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCTTGACTTTCTATGGTGTTaGCAGCATCTGAGTCCAATC +
Preference number: 2 (lower is better)
Translates to: LKRCISALDHSALGIPSLDFLWC*QHLSPI
Trigger: GATTGGACTCAGATGCTGTCAACACCATAGAAAGTC...AAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGTGGTGGGAGCTTTTCTaGTATGCAGAGAATTCCGCA +
Preference number: 2 (lower is better)
Translates to: QTHQPHKELTRPAVSIIEWWELF*YAENSA
Trigger: TGCGGAATTCTCTGCATAGCAGAAAAGCTCCCACCA...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp CAAGCTCCACTTTTCGGTCAATCACTTTCTCAGTGCCCATCTCCTGGGGCTTGGACTTCTTTAAAGGGATaGAGTCAATCCTGGTATTCA +
Preference number: 2 (lower is better)
Translates to: QAPLFGQSLSQCPSPGAWTSLKG*SQSWYS
Trigger: TGAATACCAGGATTGACTGCATCCCTTTAAAGAAGT...CCAAGCCCCAGGAGATGGGCACTGAGAAAGTGATTGACCGAAAAGTGGAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR GCA 90 bp TCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTGAGATGGCCCTTTCCTaGCATTCACTCAAATCTAGA +
Preference number: 2 (lower is better)
Translates to: SLKRCISALDHSALGIPSEMALS*HSLKSR
Trigger: TCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTC...AGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp TCCAAAGGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: SKGHWTCLLNAAFQLLIIKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...AATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR GCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCTCCATCCTTTTGGGCTaGCTTGCTGTAGGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFSILLG*LAVGWP
Trigger: GGGCCACCCTACAGCAAGGCAGCCCAAAAGGATGGA...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR GCA 90 bp GGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCGTTTCTTCAAAAACTTaGAAGCTCCTGGCCACTTTG +
Preference number: 2 (lower is better)
Translates to: GHWTCLLNAAFQLLIILPVSSKT*KLLATL
Trigger: CAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAAC...GGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR CCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGACCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 2 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp ATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 2 (lower is better)
Translates to: IFFFSSVGSSGIWILCALPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...CAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCCCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 2 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTCTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 2 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp CAAGACAAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGACTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 2 (lower is better)
Translates to: QDKLLSFPTLNSEVIHRGLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...TCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTTGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR CCA 90 bp TGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGAGCCCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTG +
Preference number: 2 (lower is better)
Translates to: CYGQMVQNGIPHSHSRLSPFFRS*LLVSSV
Trigger: CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG...GCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CAA 90 bp GAACTTCAGAGGACCTCCAAGGGGACCACCACCTTCTTCCGTATGTaGACGATGGAGAAATTCACTATGAGAGATTCCTGTTTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: ELQRTSKGTTTFFRM*TMEKFTMRDSCFFK
Trigger: TTTGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 2 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCSHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCAGCTCTTACGGCCTTTaGTACTGTCTTGCCTGGATT +
Preference number: 2 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPSSYGL*YCLAWI
Trigger: AATCCAGGCAAGACAGTATCAAAGGCCGTAAGAGCT...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR TCA 90 bp CACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATTGACTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGG +
Preference number: 2 (lower is better)
Translates to: HTGDNFSCSQLHCMASLLTAWSA*SQRMQG
Trigger: CCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGT...CAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp TATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCCAAAGGATGCAAGGGTTGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 2 (lower is better)
Translates to: YPSAHLELVSMKPKDARVVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...AACCCTTGCATCCTTTGGCTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
3UTR-3UTR GCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCCGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 2 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVRIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTGGAGCTTTTCTGCTATaGAGAGAATTCCGCATAGCA +
Preference number: 2 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSGAFLL*REFRIA
Trigger: TGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp ATGGCTCAATATAATCACTGCTTGCTGCCCTCCACTGCCCTATGGATATCTTACGGAGCTTTTCTGCTATaGAGAGAATTCCGCATAGCA +
Preference number: 2 (lower is better)
Translates to: MAQYNHCLLPSTALWISYGAFLL*REFRIA
Trigger: TGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC...GTAAGATATCCATAGGGCAGTGGAGGGCAGCAAGCAGTGATTATATTGAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR GCA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGTGGTGGGAGCTTTTCTaGTATGCAGAGAATTCCGCA +
Preference number: 2 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMWWELF*YAENSA
Trigger: TGCGGAATTCTCTGCATAGCAGAAAAGCTCCCACCA...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp TCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATCATCTCAATGGAGATaGCCCTTTCCTGCCATTCAC +
Preference number: 2 (lower is better)
Translates to: SQWRWPFPAIHSNLELPISSQWR*PFPAIH
Trigger: GTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGA...TATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp TGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGAGCATCAAGCCATATTCCTaGAATACAGATGAGCTGTTC +
Preference number: 2 (lower is better)
Translates to: CYGQMVQNGIPHSHSRLSIKPYS*NTDELF
Trigger: GAACAGCTCATCTGTATTCCAGGAATATGGCTTGAT...GCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR CCA 90 bp ACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTCAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: TSLQCAFSLSDQVLVKFLQILCS*AETLLV
Trigger: CACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTG...AAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp GGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTTCTCTGTAGAATTCTaGGAACTAGTTTGGTTCACT +
Preference number: 2 (lower is better)
Translates to: GHWTCLLNAAFQLLIILPFSVEF*ELVWFT
Trigger: AGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAA...GGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp AATGCTTCAGACCAGAGCACCAGGCAGATTTCTAGTGAGTGTTCTGCCTTTCCCTTCTCTGTAGAATTCTaGGAACTAGTTTGGTTCACT +
Preference number: 2 (lower is better)
Translates to: NASDQSTRQISSECSAFPFSVEF*ELVWFT
Trigger: AGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAA...GGGAAAGGCAGAACACTCACTAGAAATCTGCCTGGTGCTCTGGTCTGAAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR TCA 90 bp CAAGACAAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAATGATCATGTTTCACTaGAGCCTCAATCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: QDKLLSFPTLNSEVIHRGMIMFH*SLNLPG
Trigger: GCCTGGGAGATTGAGGCTTCAGTGAAACATGATCAT...TCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTTGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR TCA 90 bp AGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCTCTAAGGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 2 (lower is better)
Translates to: RAGSRTDSSHFETSDTSKVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...CTTAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTGCATTTTCCCTCAGTaGTCAGGTACTCGTGAAATT +
Preference number: 2 (lower is better)
Translates to: LWPWMKLCTISRAGSRTDCIFPQ*SGTREI
Trigger: AATTTCACGAGTACCTGATCACTGAGGGAAAATGCA...GTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp ACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACTGCATTTTCCCTCAGTaGTCAGGTACTCGTGAAATT +
Preference number: 2 (lower is better)
Translates to: TLHDFKSRFKNRLFPLRDCIFPQ*SGTREI
Trigger: AATTTCACGAGTACCTGATCACTGAGGGAAAATGCA...GTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp AGAGGTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTGCTTGTGGCCCTGGATaGAACTTTGCACGATTTCAA +
Preference number: 2 (lower is better)
Translates to: RGHTGDNFSCSQLHCMASACGPG*NFARFQ
Trigger: TTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGC...AGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTACCACATCTCATCTCTaGATTCCCTTTAGCCTAATT +
Preference number: 2 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQATTSHL*IPFSLI
Trigger: AATTAGGCTAAAGGGAATGCAGAGATGAGATGTGGT...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR GCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTGATTTGGATTTTATGTaGGCTGCCCATTCGCGATCC +
Preference number: 2 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCDLDFM*AAHSRS
Trigger: GGATCGCGAATGGGCAGCGCACATAAAATCCAAATC...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCCTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 2 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp CAAGACAAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAGCCTTGGGATTGCTATaGCCAGATGGTACAAAATGG +
Preference number: 2 (lower is better)
Translates to: QDKLLSFPTLNSEVIHRGALGLL*PDGTKW
Trigger: CCATTTTGTACCATCTGGCCATAGCAATCCCAAGGC...TCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTTGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR TCA 90 bp CAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTGAAGCCAATCCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 2 (lower is better)
Translates to: QCAFSLSDQVLVKFLEANPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...ATTGGCTTCAAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp TCCAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGTGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 2 (lower is better)
Translates to: SKGTTTFFRMLTMEKFTMWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...CATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTGGTGGGAGCTTTTCTaGTATGCAGAGAATTCCGCA +
Preference number: 2 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVWWELF*YAENSA
Trigger: TGCGGAATTCTCTGCATAGCAGAAAAGCTCCCACCA...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTAAATACAGAAATTCCTaGTGGTGGCTATCCCAAAAT +
Preference number: 2 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQAKYRNS*WWLSQN
Trigger: ATTTTGGGATAGCCACCAGCAGGAATTTCTGTATTT...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR GCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCAGATTTGGATTTTATGTaGGCTGCCCATTCGCGATCC +
Preference number: 2 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPDLDFM*AAHSRS
Trigger: GGATCGCGAATGGGCAGCGCACATAAAATCCAAATC...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp AGAAGCTGGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGGTTTCTTCAAAAACTTaGAAGCTCCTTGGTATTGAC +
Preference number: 2 (lower is better)
Translates to: RSWLLVSSVHFPSVIRYSVSSKT*KLLGID
Trigger: GTCAATACCAAGGAGCTTGCAAGTTTTTGAAGAAAC...CGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAGCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486825.6
3UTR-3UTR CCA 90 bp GGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATTTCTTTGTTATGGTCTaGGGAAACACTCTGACTTTC +
Preference number: 2 (lower is better)
Translates to: GTTTFFRMLTMEKFTMRDFFVMV*GNTLTF
Trigger: GAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAA...ATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTTTCTCTGTAGAATTCTaGGAACTAGTTTGGTTCACT +
Preference number: 2 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSFSVEF*ELVWFT
Trigger: AGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAA...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp AAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAGCAGGCATAATAACTCACACATaGGCAGCTCGCAAATTTCAA +
Preference number: 2 (lower is better)
Translates to: KLLSFPTLNSEVIHRGAGIITHT*AARKFQ
Trigger: TTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTAT...GCCTGCTCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR GCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCAGGAGCTTTTCTGCTATaGAGAGAATTCCGCATAGCA +
Preference number: 2 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPGAFLL*REFRIA
Trigger: TGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTACTTCTTTAAAGGGATaGAGTCAATCCTGGTATTCA +
Preference number: 2 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSTSLKG*SQSWYS
Trigger: TGAATACCAGGATTGACTGCATCCCTTTAAAGAAGT...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAGAGATGGCCCTTTCCTaGCATTCACTCAAATCTAGA +
Preference number: 2 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQEMALS*HSLKSR
Trigger: TCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTC...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGAGATGGCCCTTTCCTaGCATTCACTCAAATCTAGA +
Preference number: 2 (lower is better)
Translates to: NSHMSSSQISKSLVFKSYEMALS*HSLKSR
Trigger: TCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTC...ATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR GCA 90 bp CTGGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAAATGTCTCTTAAACGCTaGATTTCAGCTCTTGATCAT +
Preference number: 2 (lower is better)
Translates to: LVTSLQCAFSLSDQVLVKMSLKR*ISALDH
Trigger: ATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACAT...TTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCTCATCTCAATGGAGATaGCCCTTTCCTGCCATTCAC +
Preference number: 2 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFSSQWR*PFPAIH
Trigger: GTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGA...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp GATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACTTCTTTGTTATGGTCTaGGGAAACACTCTGACTTTC +
Preference number: 2 (lower is better)
Translates to: DFKSRFKNRLFPLRDIRYFFVMV*GNTLTF
Trigger: GAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAA...GTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCCTAGTTCTCTTTTTGTaGTGCCAGACCTGTATATTC +
Preference number: 2 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPLVLFL*CQTCIF
Trigger: GAATATACAGGTCTGGCACCACAAAAAGAGAACTAG...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CAA 90 bp GTGCTGATAACTCCCAAAATCCATATCCACAATCTAGTTCTCTTTTaGTGGTGCCAGACCTGTATATTCAACTGTCTAGTGGACATTCCA +
Preference number: 2 (lower is better)
Translates to: VLITPKIHIHNLVLF*WCQTCIFNCLVDIP
Trigger: TGGAATGTCCACTAGACAGTTGAATATACAGGTCTGGCACCACAAAAAGAGAACTAGATTGTGGATATGGATTTTGGGAGTTATCAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR TCA 90 bp TCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATTCTCTGTAGAATTCTaGGAACTAGTTTGGTTCACT +
Preference number: 2 (lower is better)
Translates to: SQWRWPFPAIHSNLELPIFSVEF*ELVWFT
Trigger: AGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAA...TATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp CTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 2 (lower is better)
Translates to: LLFFSWFKWDLDFMCAAHTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...ATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR GCA 90 bp AGTTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCACTTCTTTAAAGGGATaGAGTCAATCCTGGTATTCA +
Preference number: 2 (lower is better)
Translates to: SLVHLIISMEMALSCHSLTSLKG*SQSWYS
Trigger: TGAATACCAGGATTGACTGCATCCCTTTAAAGAAGT...GAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGGATGCAGTCAATCCTaGTATTCACCACAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: NSHMSSSQISKSLVFKSYGCSQS*YSPQRR
Trigger: TCTTCTTTGTGGTGAATACCAGGATTGACTGCATCC...ATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAGGATGCAGTCAATCCTaGTATTCACCACAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQGCSQS*YSPQRR
Trigger: TCTTCTTTGTGGTGAATACCAGGATTGACTGCATCC...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp ACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCAATCAGAGCAGTTGCTGGTTCAAGTGGGATTTaGATTTTATGTGCGCTGCCC +
Preference number: 2 (lower is better)
Translates to: TTIGILSRANISSIRAVAGSSGI*ILCALP
Trigger: GGGCAGCGCACATAAAATCCAAATCCCACTTGAACC...AGCAACTGCTCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR CCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTTTCAGTTGGTTCAAGTaGGATTTGGATTTTATGTGC +
Preference number: 2 (lower is better)
Translates to: TSATQGADKTCCFYYRERFSWFK*DLDFMC
Trigger: GCACATAAAATCCAAATCCCACTTGAACCAACTGAA...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTTACAATTTCTAAGAATATGAACAGTGGGCTCAACCACACTGCCTTACACTTACACCCGCTACATAAATaGACAGACAGCATGATCTAC +
Preference number: 2 (lower is better)
Translates to: FTISKNMNSGLNHTALHLHPLHK*TDSMIY
Trigger: GTAGATCATGCTGTCTGTTCATTTATGTAGCGGGTG...TAAGTGTAAGGCAGTGTGGTTGAGCCCACTGTTCATATTCTTAGAAATTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR TCA 90 bp GTTGATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAACCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 2 (lower is better)
Translates to: VDSPGYFPKHSSDYSVCEPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...TTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTAGACCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 2 (lower is better)
Translates to: FRAYLLVTCFRASIPFFRPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...TCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp CTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATTCCTGTTTCTTCCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 2 (lower is better)
Translates to: LLPYVDDGEIHYERFLFLPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...AAGAAACAGGAATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp TATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTAGAAGCTGGTTAGGTTCAAGTGGGATTTaGATTTTATGTGCGCTGCCC +
Preference number: 2 (lower is better)
Translates to: YLLVTCFRASIPFFRSWLGSSGI*ILCALP
Trigger: GGGCAGCGCACATAAAATCCAAATCCCACTTGAACC...TAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp CTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATCTTCTTTTCTTCAGTTaGTTCAAGTGGGATTTGGAT +
Preference number: 2 (lower is better)
Translates to: LLFFSWFKWDLDFMCAAHLLFFS*FKWDLD
Trigger: ATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG...ATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp TTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTAGAACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 2 (lower is better)
Translates to: FRAYLLVTCFRASIPFFRTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...TCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR TCA 90 bp ACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCAATCAGAGCAGTTGCTCAGTTGCTCTATTTCTaGAGTCCACCACTGTGTAAT +
Preference number: 2 (lower is better)
Translates to: TTIGILSRANISSIRAVAQLLYF*SPPLCN
Trigger: ATTACACAGTGGTGGACTTCAGAAATAGAGCAACTG...AGCAACTGCTCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAGAACTCCCAATATGTaGCTCACAAATACTTCAGTC +
Preference number: 2 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFRTPNM*LTNTSV
Trigger: GACTGAAGTATTTGTGAGCCACATATTGGGAGTTCT...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CCA 90 bp CACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATTGAGAACTCCCAATATGTaGCTCACAAATACTTCAGTC +
Preference number: 2 (lower is better)
Translates to: HTGDNFSCSQLHCMASLLRTPNM*LTNTSV
Trigger: GACTGAAGTATTTGTGAGCCACATATTGGGAGTTCT...CAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR TCA 90 bp TATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTAGAAGCTGGTTAACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 2 (lower is better)
Translates to: YLLVTCFRASIPFFRSWLTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...TAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp ATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTTCAGTTGGTTCAAGTaGGATTTGGATTTTATGTGC +
Preference number: 2 (lower is better)
Translates to: IVLAIFRNILLIIASVKIFSWFK*DLDFMC
Trigger: GCACATAAAATCCAAATCCCACTTGAACCAACTGAA...GATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CCA 90 bp TCTGAGTCCAATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTCTTCTTTTCTTCAGTTaGTTCAAGTGGGATTTGGAT +
Preference number: 2 (lower is better)
Translates to: SESNLLLFFSWFKWDLDFLLFFS*FKWDLD
Trigger: ATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG...AAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR CCA 72 bp GGTGGCCCTGAGTGTGCTAATCAGCAGCAGTGTCCGTaGCAGTGGGCAGATCCCAGAGCTCTGAGTGCTGGC +
Preference number: 3 (lower is better)
Translates to: GGPECANQQQCP*QWADPRALSAG
Trigger: GCCAGCACTCAGAGCTCTGGGATCTGCCCACTGCCACGGACACTGCTGCTGATTAGCACACTCAGGGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CCA 72 bp CCTGAGTGTGCTAATCAGCAGCAGTGTCCGTGGCAGTaGGCAGATCCCAGAGCTCTGAGTGCTGGCTGTGAT +
Preference number: 3 (lower is better)
Translates to: PECANQQQCPWQ*ADPRALSAGCD
Trigger: ATCACAGCCAGCACTCAGAGCTCTGGGATCTGCCCACTGCCACGGACACTGCTGCTGATTAGCACACTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR TCA 72 bp TTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTaGACTGGATCCCCACCACCTTTCCAAAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: LPRLGDKHTPPS*TGSPPPFQRPL
Trigger: CAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CAA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCGCTGCATTTCAGCTCTaGATCATTCTGCCCTGGGGA +
Preference number: 3 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTAAFQL*IILPWG
Trigger: TCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGC...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR GCA 72 bp CCCATCCTTTTAAGGCTCCATCCTTTTGGGCTGCCTTaGTGTAGGGTGGCCCTGAGTGTGCTAATCAGCAGC +
Preference number: 3 (lower is better)
Translates to: PILLRLHPFGLP*CRVALSVLISS
Trigger: GCTGCTGATTAGCACACTCAGGGCCACCCTACAGCAAGGCAGCCCAAAAGGATGGAGCCTTAAAAGGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CCA 72 bp TCCTGGCCACTTTGCGTTTGTCATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCACCTGGCTTAGGCGTT +
Preference number: 3 (lower is better)
Translates to: SWPLCVCHVDAA*QPFLGPPGLGV
Trigger: AACGCCTAAGCCAGGTGGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR GCA 72 bp TGGAGGCTCTGGATACCTGGACTGGAGGGCTCTGCTTaGCTTGGGATTGCTATGGCCAGATGGTACAAAATG +
Preference number: 3 (lower is better)
Translates to: WRLWIPGLEGSA*LGIAMARWYKM
Trigger: CATTTTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 72 bp CAAAGCCATTTAGATAGCACTGCTGGTGTGATGGACTaGAGGCTCTGGATACCTGGACTGGAGGGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: QSHLDSTAGVMD*RLWIPGLEGSA
Trigger: AGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTCCAGTCCATCACACCAGCAGTGCTATCTAAATGGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 72 bp TGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTaGGAGACAAACATACCCCTCCCTCCTGAACTGGAT +
Preference number: 3 (lower is better)
Translates to: CREFRIALLCPD*ETNIPLPPELD
Trigger: ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CAA 90 bp TCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 3 (lower is better)
Translates to: SLKRCISALDHSALGIPSPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...AGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR TCA 72 bp CCACTGTGTAATTGGTCACAAGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGATTCTCTGCTCTTGGG +
Preference number: 3 (lower is better)
Translates to: PLCNWSQEDPQS*SCGAGRFSALG
Trigger: CCCAAGAGCAGAGAATCTGCCGGCACCACATGATCAGCTTTGTGGATCCTCTTGTGACCAATTACACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
3UTR GCA 72 bp TTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTaGCCAGACTGGGAGACAAACATACCCCTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: FLLCREFRIALL*PDWETNIPLPP
Trigger: AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
3UTR GCA 72 bp GATACCTGGACTGGAGGGCTCTGCTTGCCTTGGGATTaGTATGGCCAGATGGTACAAAATGGCATTCCTCAT +
Preference number: 3 (lower is better)
Translates to: DTWTGGLCLPWD*YGQMVQNGIPH
Trigger: ATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCAGGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR GCA 72 bp TTGGTCACAAGAGGATCCACAAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCTTGGGCAGAAACCTTG +
Preference number: 3 (lower is better)
Translates to: LVTRGSTKLIMW*RQILCSWAETL
Trigger: CAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCACCACATGATCAGCTTTGTGGATCCTCTTGTGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
3UTR CCA 72 bp CCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCTGCATTTCAGCTCTTG +
Preference number: 3 (lower is better)
Translates to: PELDPHHLSKGH*TCLLNAAFQLL
Trigger: CAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR CCA 72 bp AAGCTGATCATGTGGTGCCGGCAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTGATGATGTCTAGGCCT +
Preference number: 3 (lower is better)
Translates to: KLIMWCRQILCS*AETLLVMMSRP
Trigger: AGGCCTAGACATCATCACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR CAA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 3 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR TCA 72 bp TTCCAGCTCTACCGCTTGCTAGCTGTACTCCATTGCTaGGCCTTAGTTTCCTCCCTGGTTAACAGCAAAGGA +
Preference number: 3 (lower is better)
Translates to: FQLYRLLAVLHC*ALVSSLVNSKG
Trigger: TCCTTTGCTGTTAACCAGGGAGGAAACTAAGGCTCAGCAATGGAGTACAGCTAGCAAGCGGTAGAGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR GCA 72 bp CCTTTCCAAAGGCCACTGGACATGTCTCTTAAACGCTaGATTTCAGCTCTTGATCATTCTGCCCTGGGGATC +
Preference number: 3 (lower is better)
Translates to: PFQRPLDMSLKR*ISALDHSALGI
Trigger: GATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CAA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATATATCTCTTAGTTACTaGTTTCAGAGCCTCAATACC +
Preference number: 3 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHISLSY*FQSLNT
Trigger: GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATAT...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CAA 90 bp CTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCGCGATCGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 3 (lower is better)
Translates to: LQLVQVGFGFYVRCPFAIADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...GATCGCGAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR CAA 90 bp GGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTCTTGGGCAGAAACCTaGTTGGTGATGATGTCTAGG +
Preference number: 3 (lower is better)
Translates to: GHWTCLLNAAFQLLIILPSWAET*LVMMSR
Trigger: CCTAGACATCATCACCAACAAGGTTTCTGCCCAAGA...GGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CCA 72 bp TCTAAGGTTTGTCCCAGCTTTGCCTTGCTCTGTGACTaGAACATCCATGTTTTAGGCCTCAGTTTCCCCATC +
Preference number: 3 (lower is better)
Translates to: SKVCPSFALLCD*NIHVLGLSFPI
Trigger: GATGGGGAAACTGAGGCCTAAAACATGGATGTTCCAGTCACAGAGCAAGGCAAAGCTGGGACAAACCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR CAA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAACCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 3 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CAA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 3 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CAA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTCAAATTTCAAAGTCTTaGGTCTTCAAGTCCTATGTC +
Preference number: 3 (lower is better)
Translates to: FRIALLCPDWETNIPLPPQISKS*VFKSYV
Trigger: GACATAGGACTTGAAGACCAAAGACTTTGAAATTTG...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CAA 90 bp AATGCTTCAGACCAGAGCACCAGGCAGATTTCTAGTGAGTGTTCTGCCTTTCCCACATATAAAAACGACTaGGCACTGCTTGGCTCACAG +
Preference number: 3 (lower is better)
Translates to: NASDQSTRQISSECSAFPTYKND*ALLGSQ
Trigger: CTGTGAGCCAAGCAGTGCCAAGTCGTTTTTATATGT...GGGAAAGGCAGAACACTCACTAGAAATCTGCCTGGTGCTCTGGTCTGAAGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR CAA 90 bp CTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCTTTGGTTCAAGTGGGATTaGGATTTTATGTGCGCTGCC +
Preference number: 3 (lower is better)
Translates to: LKRCISALDHSALGIPSLWFKWD*DFMCAA
Trigger: GGCAGCGCACATAAAATCCAAATCCCACTTGAACCA...AAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CAA 90 bp GAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCTCTAAGCTGGTTCAAGTGGGATTaGGATTTTATGTGCGCTGCC +
Preference number: 3 (lower is better)
Translates to: EQVQEQTLPTSRHQIPLSWFKWD*DFMCAA
Trigger: GGCAGCGCACATAAAATCCAAATCCCACTTGAACCA...GCTTAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CAA 90 bp GGCTGTAGGCTTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 3 (lower is better)
Translates to: GCRLVALDETLHDFKSRFTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...GAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CAA 90 bp GGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 3 (lower is better)
Translates to: GTTTFFRMLTMEKFTMRDADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...ATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
3UTR TCA 72 bp CTACAAACTGCCAGCTTAACACAGTGCTTAATAGCTTaGGTCTACCAGCCTCACCTCAATTCCAGCTCTACC +
Preference number: 3 (lower is better)
Translates to: LQTASLTQCLIA*VYQPHLNSSST
Trigger: GGTAGAGCTGGAATTGAGGTGAGGCTGGTAGACTCAAGCTATTAAGCACTGTGTTAAGCTGGCAGTTTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR TCA 72 bp TTATCCAAGCGCTCATCTAGAACTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGA +
Preference number: 3 (lower is better)
Translates to: LSKRSSRTAWSA*SQRMQGLENFR
Trigger: TCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGTTCTAGATGAGCGCTTGGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR CCA 72 bp CTTGCCTTGGGATTGCTATGGCCAGATGGTACAAAATaGCATTCCTCATTCTCACTCCAGGCTGAGCAAATA +
Preference number: 3 (lower is better)
Translates to: LALGLLWPDGTK*HSSFSLQAEQI
Trigger: TATTTGCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCCCAAGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR CAA 90 bp GTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 3 (lower is better)
Translates to: VTQVITSLVLSFIVWHLYPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...ATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CAA 90 bp TGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGAGCGAAAGAGGGCTTCAATaGGAAGTAATAGATCTCCAA +
Preference number: 3 (lower is better)
Translates to: CYGQMVQNGIPHSHSRLSERGLQ*EVIDLQ
Trigger: TTGGAGATCTATTACTTCCAATTGAAGCCCTCTTTC...GCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR CAA 90 bp TGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGAGCTTCTCTTTAGGTTCTTaGTTATGGTCTGGGGAAACA +
Preference number: 3 (lower is better)
Translates to: CYGQMVQNGIPHSHSRLSFSLGS*LWSGET
Trigger: TGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAA...GCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR CAA 90 bp GTAGGCTTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGAACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 3 (lower is better)
Translates to: VGLWPWMKLCTISRAGSRTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...TCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CAA 90 bp GACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCTTTAACCCATCGGTTTaGTTTCCGGGCATATCTCTT +
Preference number: 3 (lower is better)
Translates to: DMSLKRCISALDHSALGIFNPSV*FPGISL
Trigger: AAGAGATATGCCCGGAAACAAAACCGATGGGTTAAA...GATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR GCA 72 bp CACAACCTTGGATTATGGCTCAATATAATCACTGCTTaGTGCCCTCCACTGCCCTATGGATATCTTACTGAG +
Preference number: 3 (lower is better)
Translates to: HNLGLWLNIITA*CPPLPYGYLTE
Trigger: CTCAGTAAGATATCCATAGGGCAGTGGAGGGCAGCAAGCAGTGATTATATTGAGCCATAATCCAAGGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CCA 72 bp TCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATTaGAGTGGCTGTAGGCTTGTGGCCCTGGATGAAACT +
Preference number: 3 (lower is better)
Translates to: SLVLSFIVWHLY*SGCRLVALDET
Trigger: AGTTTCATCCAGGGCCACAAGCCTACAGCCACTCCAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR CCA 72 bp CAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATaGCATCTTTATTGGAGTGGCTGTAGGCTTGTGGCC +
Preference number: 3 (lower is better)
Translates to: QVITSLVLSFIV*HLYWSGCRLVA
Trigger: GGCCACAAGCCTACAGCCACTCCAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR CCA 72 bp GGCATCCATCTGCCTTTTTGTATTATGAACTTTCTCTaGGTGACACCCATGGCTTCTACAACCACTGTTGTG +
Preference number: 3 (lower is better)
Translates to: GIHLPFCIMNFL*VTPMASTTTVV
Trigger: CACAACAGTGGTTGTAGAAGCCATGGGTGTCACCCAGAGAAAGTTCATAATACAAAAAGGCAGATGGATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CCA 72 bp GATTACACCTGCCTTGAAAACCACAACCTTGGATTATaGCTCAATATAATCACTGCTTGCTGCCCTCCACTG +
Preference number: 3 (lower is better)
Translates to: DYTCLENHNLGL*LNIITACCPPL
Trigger: CAGTGGAGGGCAGCAAGCAGTGATTATATTGAGCCATAATCCAAGGTTGTGGTTTTCAAGGCAGGTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR TCA 72 bp AGTGATCAGGTACTCGTGAAATTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTGATAGTCCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: SDQVLVKFLEAN*LEDTMLIVLAG
Trigger: CCCAGCCAGGACTATCAACATGGTATCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGTACCTGATCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469476.2
3UTR TCA 72 bp TCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATTGATTGGAAGATACCA +
Preference number: 3 (lower is better)
Translates to: SSVHFPSVIRYS*NSLKPIDWKIP
Trigger: TGGTATCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR GCA 72 bp GTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTaGCATTCACTCAAATCTAGAACTCCCAATATGTGG +
Preference number: 3 (lower is better)
Translates to: VHLIISMEMALS*HSLKSRTPNMW
Trigger: CCACATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR CCA 72 bp ACTTGTTTCAGAGCCTCAATACCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: TCFRASIPFFRS*LLVSSVHFPSV
Trigger: CACTGAGGGAAAATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAAACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CAA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTGCCTGGATTGGTGTTaGTGTACACATGCAATTATT +
Preference number: 3 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPCLDWC*CTHAII
Trigger: AATAATTGCATGTGTACACAAACACCAATCCAGGCA...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR CAA 90 bp GTTCCTCCCACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCAATCAGATGGTTCAAGTGGGATTaGGATTTTATGTGCGCTGCC +
Preference number: 3 (lower is better)
Translates to: VPPTTIGILSRANISSIRWFKWD*DFMCAA
Trigger: GGCAGCGCACATAAAATCCAAATCCCACTTGAACCA...TCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGTGGGAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR CAA 90 bp CTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCATTCTCTTTAGGTTCTTaGTTATGGTCTGGGGAAACA +
Preference number: 3 (lower is better)
Translates to: LDETLHDFKSRFKNRLFPFSLGS*LWSGET
Trigger: TGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAA...TGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CAA 90 bp CTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 3 (lower is better)
Translates to: LLFFSWFKWDLDFMCAAHTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...ATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
3UTR-3UTR CAA 90 bp ACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATATCTCTTAGTTACTaGTTTCAGAGCCTCAATACC +
Preference number: 3 (lower is better)
Translates to: TLHDFKSRFKNRLFPLRDISLSY*FQSLNT
Trigger: GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATAT...GTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR GCA 72 bp TCCTTCAATCACTTTCTTGCCTCAATGGATTACACCTaGCTTGAAAACCACAACCTTGGATTATGGCTCAAT +
Preference number: 3 (lower is better)
Translates to: SFNHFLASMDYT*LENHNLGLWLN
Trigger: ATTGAGCCATAATCCAAGGTTGTGGTTTTCAAGGCAGGTGTAATCCATTGAGGCAAGAAAGTGATTGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CCA 72 bp CAGCTCTTACGGCCTTTGATACTGTCTTGCCTGGATTaGTGTTTGTGTACACATGCAATTATTTATAAGCTC +
Preference number: 3 (lower is better)
Translates to: QLLRPLILSCLD*CLCTHAIIYKL
Trigger: GAGCTTATAAATAATTGCATGTGTACACAAACACCAATCCAGGCAAGACAGTATCAAAGGCCGTAAGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 72 bp CCCAAAATCCATATCCACAATCTAGTTCTCTTTTTGTaGTGCCAGACCTGTATATTCAACTGTCTAGTGGAC +
Preference number: 3 (lower is better)
Translates to: PKIHIHNLVLFL*CQTCIFNCLVD
Trigger: GTCCACTAGACAGTTGAATATACAGGTCTGGCACCACAAAAAGAGAACTAGATTGTGGATATGGATTTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR CAA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCATTCTCTTTAGGTTCTTaGTTATGGTCTGGGGAAACA +
Preference number: 3 (lower is better)
Translates to: GADKTCCFYYRERETLKPFSLGS*LWSGET
Trigger: TGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAA...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
3UTR TCA 72 bp AGTGATCAGGTACTCGTGAAATTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTGATAGTCCTGGCTATT +
Preference number: 3 (lower is better)
Translates to: SDQVLVKFLEAN*LEDTMLIVLAI
Trigger: AATAGCCAGGACTATCAACATGGTATCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGTACCTGATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
3UTR GCA 72 bp AATTCTACACAGCTCTTACGGCCTTTGATACTGTCTTaGCTGGATTGGTGTTTGTGTACACATGCAATTATT +
Preference number: 3 (lower is better)
Translates to: NSTQLLRPLILS*LDWCLCTHAII
Trigger: AATAATTGCATGTGTACACAAACACCAATCCAGGCAAGACAGTATCAAAGGCCGTAAGAGCTGTGTAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 72 bp TCCTGCCATTCACTCAAATCTAGAACTCCCAATATGTaGCTCACAAATACTTCAGTCATCTACAAAAGCATC +
Preference number: 3 (lower is better)
Translates to: SCHSLKSRTPNM*LTNTSVIYKSI
Trigger: GATGCTTTTGTAGATGACTGAAGTATTTGTGAGCCACATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CAA 90 bp GACAGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGCAAATTTCAAAGTCTTaGGTCTTCAAGTCCTATGTC +
Preference number: 3 (lower is better)
Translates to: DSSDNNSHMSSSQISKSLQISKS*VFKSYV
Trigger: GACATAGGACTTGAAGACCAAAGACTTTGAAATTTG...CAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR-3UTR CAA 90 bp GACAGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGATATCTCTTAGTTACTaGTTTCAGAGCCTCAATACC +
Preference number: 3 (lower is better)
Translates to: DSSDNNSHMSSSQISKSLISLSY*FQSLNT
Trigger: GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATAT...CAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR TCA 72 bp CTCAATAGAAAGACAGCAGTGATAATAACTCACACATaGGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: LNRKTAVIITHT*AARKFQSLWSS
Trigger: TGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTCTTTCTATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
3UTR TCA 72 bp CAAATATATCTTCAATCAGAGCAGTTGCTCTATTTCTaGAGTCCACCACTGTGTAATTGGTCACAAGAGGAT +
Preference number: 3 (lower is better)
Translates to: QIYLQSEQLLYF*SPPLCNWSQED
Trigger: ATCCTCTTGTGACCAATTACACAGTGGTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAAGATATATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
3UTR TCA 72 bp CAATCACTTTCTTGCCTCAATGGATTACACCTGCCTTaGAAACCACAACCTTGGATTATGGCTCAATATAAT +
Preference number: 3 (lower is better)
Translates to: QSLSCLNGLHLP*KPQPWIMAQYN
Trigger: ATTATATTGAGCCATAATCCAAGGTTGTGGTTTTCAAGGCAGGTGTAATCCATTGAGGCAAGAAAGTGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR GCA 72 bp AGAATCAAAGTACTTTCTACCCACTTACAACAGCACTaGCTGAACTGTGAGAAGTATCTAAAGCCTAATCAA +
Preference number: 3 (lower is better)
Translates to: RIKVLSTHLQQH*LNCEKYLKPNQ
Trigger: TTGATTAGGCTTTAGATACTTCTCACAGTTCAGGCAGTGCTGTTGTAAGTGGGTAGAAAGTACTTTGATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR-3UTR CAA 90 bp AGAATTCTTTCATCTCTACATTTACGACCACCACAAGACAAATTACTTTCCTTCTGTTTCTTCAAAAACTaGCAAGCTCCTGGCCACTTT +
Preference number: 3 (lower is better)
Translates to: RILSSLHLRPPQDKLLSFCFFKN*QAPGHF
Trigger: AAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAACA...GAAGGAAAGTAATTTGTCTTGTGGTGGTCGTAAATGTAGAGATGAAAGAATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR GCA 72 bp AAAATCCATATCCACAATCTAGTTCTCTTTTTGTGGTaGCAGACCTGTATATTCAACTGTCTAGTGGACATT +
Preference number: 3 (lower is better)
Translates to: KIHIHNLVLFLW*QTCIFNCLVDI
Trigger: AATGTCCACTAGACAGTTGAATATACAGGTCTGGCACCACAAAAAGAGAACTAGATTGTGGATATGGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR CAA 90 bp TCTGAGTCCAATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTCATCCATCTGCCTTTTaGTATTATGAACTTTCTCTG +
Preference number: 3 (lower is better)
Translates to: SESNLLLFFSWFKWDLDFHPSAF*YYELSL
Trigger: CAGAGAAAGTTCATAATACAAAAAGGCAGATGGATG...AAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR-3UTR CAA 90 bp AGAATTCTTTCATCTCTACATTTACGACCACCACAAGACAAATTACTTTCCTTCCAAATTTCAAAGTCTTaGGTCTTCAAGTCCTATGTC +
Preference number: 3 (lower is better)
Translates to: RILSSLHLRPPQDKLLSFQISKS*VFKSYV
Trigger: GACATAGGACTTGAAGACCAAAGACTTTGAAATTTG...GAAGGAAAGTAATTTGTCTTGTGGTGGTCGTAAATGTAGAGATGAAAGAATTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
3UTR CCA 72 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTaGTATTCACCACAAAGAAGATCCTCATGTATAAAA +
Preference number: 3 (lower is better)
Translates to: GHKTSLKGCSQS*YSPQRRSSCIK
Trigger: TTTTATACATGAGGATCTTCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCTCCGTTGCAGGCCCCTaGGCCCACTGCCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: SFAQTGRQTYPSLLNWIPSVAGP*AHCPRE
Trigger: TTCCCGTGGGCAGTGGGCTCAGGGGCCTGCAACGGA...GGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
CDS-3UTR GCA 90 bp TCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SFAQTGRQTYPSLLNWIPTPAWI*RCPWPR
Trigger: TCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGT...GGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: LCPDWETNIPLPPELDPHTPAWI*RCPWPR
Trigger: TCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGT...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATTCCGTTGCAGGCCCCTaGGCCCACTGCCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDSVAGP*AHCPRE
Trigger: TTCCCGTGGGCAGTGGGCTCAGGGGCCTGCAACGGA...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
CDS-3UTR TCA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTAWSQR*RSHRRA
Trigger: GGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGC...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACACGGGAACTGCTCGTaGAGCCGCCACGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGHGNCS*SRHGRH
Trigger: ATGGCGTCCGTGGCGGCTGCACGAGCAGTTCCCGTG...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
CDS-3UTR GCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTSRWPS*NASVDL
Trigger: CAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCT...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGAGCTGCAACGCCAGCGTaGATTTGCCGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGAATPA*ICRCPW
Trigger: CCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGC...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCGCTGCAACGCCAGCGTaGATTTGCCGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTAATPA*ICRCPW
Trigger: CCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGC...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSKSPAASMSSTLLSKRSSPPSR*PSCNAS
Trigger: GCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGA...TGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCCACGGGAACTGCTCGTaGAGCCGCCACGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKAHGNCS*SRHGRH
Trigger: ATGGCGTCCGTGGCGGCTGCACGAGCAGTTCCCGTG...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
CDS-3UTR GCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATACTGCCCACGGGAACTaGTCGTGCAGCCGCCACGGA +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDTAHGN*SCSRHG
Trigger: TCCGTGGCGGCTGCACGAGCAGTTCCCGTGGGCAGT...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
CDS-3UTR GCA 90 bp TCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTACTGCCCACGGGAACTaGTCGTGCAGCCGCCACGGA +
Preference number: 4 (lower is better)
Translates to: SLLNWIPTTFPKATGHVSTAHGN*SCSRHG
Trigger: TCCGTGGCGGCTGCACGAGCAGTTCCCGTGGGCAGT...AGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000495175.6
CDS-3UTR TCA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCCATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 4 (lower is better)
Translates to: DWETNIPLPPELDPHHLSHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SSSKSPAASMSSTLLSKRRGRVR*RPLSPL
Trigger: CAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCT...GCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
CDS-3UTR GCA 90 bp ATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: MKPKDARVRELQRTSKGTTPAWI*RCPWPR
Trigger: TCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGT...GGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTCTGGATACCTGGACTaGAGGGCTCTGCTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTSGYLD*RALLAL
Trigger: CAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGA...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPAWSQR*RSHRRA
Trigger: GGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGC...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGCACGGGAACTGCTCGTaGAGCCGCCACGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: GAFLLCREFRIALLCPDWHGNCS*SRHGRH
Trigger: ATGGCGTCCGTGGCGGCTGCACGAGCAGTTCCCGTG...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
CDS-3UTR GCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPRGRVR*RPLSPL
Trigger: CAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCT...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
CDS-3UTR GCA 90 bp CTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: LLNAAFQLLIILPWGSLLTPAWI*RCPWPR
Trigger: TCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGT...GAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: FRIALLCPDWETNIPLPPSRWPS*NASVDL
Trigger: CAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCT...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: LQEPSSKHVIHPLIQALISRWPS*NASVDL
Trigger: CAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCT...GATGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTGCCGGCAGATTCTCTaGTCTTGGGCAGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTCRQIL*SWAETL
Trigger: CAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCA...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAGAAGCTGCAACGCCAGCGTaGATTTGCCGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RAQQQACHPPSYPSAHLEAATPA*ICRCPW
Trigger: CCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGC...TTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHSPPSR*PSCNAS
Trigger: GCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGA...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHWTCLLNAAFQLLIILPSPPSR*PSCNAS
Trigger: GCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGA...GGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCCCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATCCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGAGGCTCTGGATACCTaGACTGGAGGGCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHEALDT*TGGLCL
Trigger: CAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTC...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp TGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGAGCGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: CYGQMVQNGIPHSHSRLSAWSQR*RSHRRA
Trigger: GGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGC...GCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTTAWSA*SQRMQG
Trigger: CCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGT...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CTCATCTCCACTCCCACCGGGAAGATGTGGCTTCCCACCTTGTTAGGTCCTAAACATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 4 (lower is better)
Translates to: LISTPTGKMWLPTLLGPKHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...TTTAGGACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGGAGTGGAGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp AATGCTTCAGACCAGAGCACCAGGCAGATTTCTAGTGAGTGTTCTGCCTTTCCCACTGCCCACGGGAACTaGTCGTGCAGCCGCCACGGA +
Preference number: 4 (lower is better)
Translates to: NASDQSTRQISSECSAFPTAHGN*SCSRHG
Trigger: TCCGTGGCGGCTGCACGAGCAGTTCCCGTGGGCAGT...GGGAAAGGCAGAACACTCACTAGAAATCTGCCTGGTGCTCTGGTCTGAAGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316891.10
CDS-3UTR GCA 90 bp ATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: MKPKDARVRELQRTSKGTAWICR*PWPRES
Trigger: TGATTCTCGGGGCCACGGGCACCGGCAAATCCACGC...GGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp CAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: QGDHHLLPYVDDGEIHYETPAWI*RCPWPR
Trigger: TCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGT...CTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATATTTGCCGGTGCCCGTaGCCCCGAGAATCACTACAA +
Preference number: 4 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHICRCP*PRESLQ
Trigger: TTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAAT...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTCCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FRIALLCPDWETNIPLPPPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
3UTR CAA 72 bp CTCCTGGCCACTTTGCGTTTGTCATGTGGATGCAGCTaGGCAGCCATTTCTGGGTCCACCTGGCTTAGGCGT +
Preference number: 4 (lower is better)
Translates to: LLATLRLSCGCS*AAISGSTWLRR
Trigger: ACGCCTAAGCCAGGTGGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGATCTGAGTGCTGGCTGTaGTGTCCCAACATAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGSECWL*CPNIAV
Trigger: GACAGCTATGTTGGGACATCACAGCCAGCACTCAGA...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTCACGGGAACTGCTCGTaGAGCCGCCACGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQAHGNCS*SRHGRH
Trigger: ATGGCGTCCGTGGCGGCTGCACGAGCAGTTCCCGTG...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316891.10
CDS-3UTR GCA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDAWICR*PWPRES
Trigger: TGATTCTCGGGGCCACGGGCACCGGCAAATCCACGC...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CCACCCTCTTATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCCAAAGGATGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: PPSYPSAHLELVSMKPKDAWICR*PWPRES
Trigger: TGATTCTCGGGGCCACGGGCACCGGCAAATCCACGC...ATCCTTTGGCTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATAAGAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR GCA 90 bp GCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: ACHPPSYPSAHLELVSMKAWICR*PWPRES
Trigger: TGATTCTCGGGGCCACGGGCACCGGCAAATCCACGC...CTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR GCA 90 bp TGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: CTISRAGSRTDSSHFETSTPAWI*RCPWPR
Trigger: TCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGT...TGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: QTHQPHKELTRPAVSIIETPAWI*RCPWPR
Trigger: TCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGT...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CTAGAACTGGTCAGCATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGGCTGCAACGCCAGCGTaGATTTGCCGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LELVSMKPKDARVRELQRAATPA*ICRCPW
Trigger: CCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGC...CCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGACCAGTTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR CCA 90 bp CAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGGCTGCAACGCCAGCGTaGATTTGCCGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: QGDHHLLPYVDDGEIHYEAATPA*ICRCPW
Trigger: CCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGC...CTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCCTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 4 (lower is better)
Translates to: DWETNIPLPPELDPHHLSLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCACCGGGAAGATGTaGCTTCCCACCTTGTTAGGT +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDPTGKM*LPTLLG
Trigger: ACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGG...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATTCTGGATACCTGGACTaGAGGGCTCTGCTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDSGYLD*RALLAL
Trigger: CAAGGCAAGCAGAGCCCTCCAGTCCAGGTATCCAGA...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp CCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTTAGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: PPELDPHHLSKGHWTCLLEDPQS*SCGAGR
Trigger: TCTGCCGGCACCACATGATCAGCTTTGTGGATCCTC...TAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACCACCTTCACTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: KDARVRELQRTSKGTTTFTAWSA*SQRMQG
Trigger: CCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGT...GAAGGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCCTGCATTTCAGCTCTTaGTCATTCTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTLHFSS*SFCPGD
Trigger: ATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAG...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCCATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 4 (lower is better)
Translates to: LLNAAFQLLIILPWGSLLHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...GAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATGCTGTACTCCATTGCTaGGCCTTAGTTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDAVLHC*ALVSSL
Trigger: CAGGGAGGAAACTAAGGCTCAGCAATGGAGTACAGC...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCATTCTCACTCCAGGCTaGGCAAATAGCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTILTPG*ANSPKL
Trigger: GAGCTTTGGGCTATTTGCTCAGCCTGGAGTGAGAAT...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPSAWSA*SQRMQG
Trigger: CCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGA...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441669.6
CDS-3UTR GCA 90 bp TCCAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SKGTTTFFRMLTMEKFTMRGRVR*RPLSPL
Trigger: CAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCT...CATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
CDS-3UTR GCA 90 bp GTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTTGCCGGCAGATTCTCTaGTCTTGGGCAGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: VPPRAQQQACHPPSYPSACRQIL*SWAETL
Trigger: CAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCA...AGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR GCA 90 bp CCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACCACCTGCCGGCAGATTCTCTaGTCTTGGGCAGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: PKDARVRELQRTSKGTTTCRQIL*SWAETL
Trigger: CAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCA...GGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR GCA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCTGCCGGCAGATTCTCTaGTCTTGGGCAGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKACRQIL*SWAETL
Trigger: CAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCA...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCCCCTGGATGAAACTTTaGACGATTTCAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTPWMKL*TISRAG
Trigger: ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGG...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDRIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTGGACTGGAGGGCTCTaGTTGCCTTGGGATTGCTAT +
Preference number: 4 (lower is better)
Translates to: SSSKSPAASMSSTLLSKRWTGGL*LPWDCY
Trigger: ATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCA...GCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCGCTCAATATAATCACTaGTTGCTGCCCTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: DWETNIPLPPELDPHHLSAQYNH*LLPSTA
Trigger: GGCAGTGGAGGGCAGCAAGCAGTGATTATATTGAGC...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTGCTGCAACGCCAGCGTaGATTTGCCGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSAATPA*ICRCPW
Trigger: CCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGC...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: SQWRWPFPAIHSNLELPISPPSR*PSCNAS
Trigger: GCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGA...TATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCATCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: LDETLHDFKSRFKNRLFPSPPSR*PSCNAS
Trigger: GCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGA...TGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERSPPSR*PSCNAS
Trigger: GCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGA...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCACAAAGCTGATCATGTaGTGCCGGCAGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DWETNIPLPPELDPHHLSTKLIM*CRQILC
Trigger: GCAGAGAATCTGCCGGCACCACATGATCAGCTTTGT...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACTCAGTGCCCATCTCCTaGGGCTTGGTATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: LCPDWETNIPLPPELDPHSVPIS*GLVLTR
Trigger: TCTTGTCAATACCAAGCCCCAGGAGATGGGCACTGA...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATGTGGCTGTAGGCTTGTaGCCCTGGATGAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDVAVGL*PWMKLC
Trigger: GCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCGCTGGTGTGATGGACTaGAGGCTCTGGATACCTGGA +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPAGVMD*RLWIPG
Trigger: TCCAGGTATCCAGAGCCTCCAGTCCATCACACCAGC...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp GTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTGTTGATAGTCCTGGCTaGGAACAGGAGGGTATCAGC +
Preference number: 4 (lower is better)
Translates to: VPPRAQQQACHPPSYPSAVDSPG*EQEGIS
Trigger: GCTGATACCCTCCTGTTCCCAGCCAGGACTATCAAC...AGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR TCA 90 bp CCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: PFFRSWLLVSSVHFPSVIAWSQR*RSHRRA
Trigger: GGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGC...GATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATAGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SQWRWPFPAIHSNLELPIAWSQR*RSHRRA
Trigger: GGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGC...TATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CTTAGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LSSSKSPAASMSSTLLSKEDPQS*SCGAGR
Trigger: TCTGCCGGCACCACATGATCAGCTTTGTGGATCCTC...CTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAGAAGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RAQQQACHPPSYPSAHLEEDPQS*SCGAGR
Trigger: TCTGCCGGCACCACATGATCAGCTTTGTGGATCCTC...TTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GAFLLCREFRIALLCPDWEDPQS*SCGAGR
Trigger: TCTGCCGGCACCACATGATCAGCTTTGTGGATCCTC...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCCAGTTGCTCTATTTCTaGAGTCCACCACTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTQLLYF*SPPLCN
Trigger: ATTACACAGTGGTGGACTTCAGAAATAGAGCAACTG...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp ACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCACCTGGGGCTTGGTATTaGCAAGAACTTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TGRQTYPSLLNWIPTTFPPGAWY*QELSRA
Trigger: TGCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGG...TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCCCTGGGGCTTGGTATTaGCAAGAACTTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSSKSPAASMSSTLLSKRPGAWY*QELSRA
Trigger: TGCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGG...GCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTACTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPTAWSA*SQRMQG
Trigger: CCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGT...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCGGTGTTGACAGCATCTaGGTCCAATCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTGVDSI*VQSSSF
Trigger: AAAAGAAGAAGATTGGACTCAGATGCTGTCAACACC...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGCATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 4 (lower is better)
Translates to: HWTCLLNAAFQLLIILPWHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...CCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCGCTGTACTCCATTGCTaGGCCTTAGTTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPAVLHC*ALVSSL
Trigger: CAGGGAGGAAACTAAGGCTCAGCAATGGAGTACAGC...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLRGRVR*RPLSPL
Trigger: CAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCT...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
CDS-3UTR GCA 90 bp GGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: GTTTFFRMLTMEKFTMRDAWICR*PWPRES
Trigger: TGATTCTCGGGGCCACGGGCACCGGCAAATCCACGC...ATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp CAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: QGDHHLLPYVDDGEIHYESRWPS*NASVDL
Trigger: CAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCT...CTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp TCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCCGTTTGTCATGTGGATaGAGCTTGGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: SFAQTGRQTYPSLLNWIPRLSCG*SLAAIS
Trigger: AGAAATGGCTGCCAAGCTGCATCCACATGACAAACG...GGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCCGTTTGTCATGTGGATaGAGCTTGGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: DWETNIPLPPELDPHHLSRLSCG*SLAAIS
Trigger: AGAAATGGCTGCCAAGCTGCATCCACATGACAAACG...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCCGTTTGTCATGTGGATaGAGCTTGGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTRLSCG*SLAAIS
Trigger: AGAAATGGCTGCCAAGCTGCATCCACATGACAAACG...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGATTTGGATTTTATGTaGGCTGCCCATTCGCGATCC +
Preference number: 4 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHDLDFM*AAHSRS
Trigger: GGATCGCGAATGGGCAGCGCACATAAAATCCAAATC...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATAGCTGCAACGCCAGCGTaGATTTGCCGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SQWRWPFPAIHSNLELPIAATPA*ICRCPW
Trigger: CCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGC...TATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCACAAAGCTGATCATGTaGTGCCGGCAGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SSSKSPAASMSSTLLSKRTKLIM*CRQILC
Trigger: GCAGAGAATCTGCCGGCACCACATGATCAGCTTTGT...GCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCCATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPHVDAA*QPFLGP
Trigger: TGGACCCAGAAATGGCTGCCAAGCTGCATCCACATG...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTAGGCTTGTGGCCCTaGATGAAACTTTGCACGATT +
Preference number: 4 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHVGLWP*MKLCTI
Trigger: AATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCGGATGCAGTCAATCCTaGTATTCACCACAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTGCSQS*YSPQRR
Trigger: TCTTCTTTGTGGTGAATACCAGGATTGACTGCATCC...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCTCATCTCAATGGAGATaGCCCTTTCCTGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: DWETNIPLPPELDPHHLSSSQWR*PFPAIH
Trigger: GTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGA...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ATGTGGTGCCGGCAGATTCTCTGCTCTTGGGCAGAAACCTTGTTGGTGATGATGGCTGGTGTGATGGACTaGAGGCTCTGGATACCTGGA +
Preference number: 4 (lower is better)
Translates to: MWCRQILCSWAETLLVMMAGVMD*RLWIPG
Trigger: TCCAGGTATCCAGAGCCTCCAGTCCATCACACCAGC...CATCATCACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCACCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp CTCATCTCCACTCCCACCGGGAAGATGTGGCTTCCCACCTTGTTAGGTCCTAAAAGCTGCCCCCTGGTTTaGTTCCTTCCCTGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: LISTPTGKMWLPTLLGPKSCPLV*FLPCKL
Trigger: TAACTTGCAGGGAAGGAACCAAACCAGGGGGCAGCT...TTTAGGACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGGAGTGGAGATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp AATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTCCGTTGCAGGCCCCTaGGCCCACTGCCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: NNSHMSSSQISKSLVFKSSVAGP*AHCPRE
Trigger: TTCCCGTGGGCAGTGGGCTCAGGGGCCTGCAACGGA...GGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
CDS-3UTR TCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTGGCTTAGGCGTTTGTaGAGTACAAGACCATCCTCC +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPWLRRL*STRPSS
Trigger: GGAGGATGGTCTTGTACTTCACAAACGCCTAAGCCA...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTFLEAN*LEDTML
Trigger: CAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATGCTTGTGGCCCTGGATaGAACTTTGCACGATTTCAA +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDACGPG*NFARFQ
Trigger: TTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGC...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGATCTGGGGAAACACTCTaGCTTTCTATGGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGSGETL*LSMVLT
Trigger: TGTCAACACCATAGAAAGTCAGAGTGTTTCCCCAGA...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACTTTGCCTTGCTCTGTaGCTGGAACATCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGLCLAL*LEHPCF
Trigger: AAAACATGGATGTTCCAGTCACAGAGCAAGGCAAAG...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp TTCAGAGCCTCAATACCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGCATCACGGGAACTGCTCGTaGAGCCGCCACGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: FRASIPFFRSWLLVSSVHHGNCS*SRHGRH
Trigger: ATGGCGTCCGTGGCGGCTGCACGAGCAGTTCCCGTG...ATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489945.5
ENST00000495175.6
CDS-3UTR GCA 90 bp TGTTTCAGAGCCTCAATACCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGACTGCCCACGGGAACTaGTCGTGCAGCCGCCACGGA +
Preference number: 4 (lower is better)
Translates to: CFRASIPFFRSWLLVSSVTAHGN*SCSRHG
Trigger: TCCGTGGCGGCTGCACGAGCAGTTCCCGTGGGCAGT...CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489945.5
ENST00000495175.6
CDS-3UTR GCA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPAWICR*PWPRES
Trigger: TGATTCTCGGGGCCACGGGCACCGGCAAATCCACGC...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: PFFRSWLLVSSVHFPSVIAWICR*PWPRES
Trigger: TGATTCTCGGGGCCACGGGCACCGGCAAATCCACGC...GATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCAACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: GADKTCCFYYRERETLKPTPAWI*RCPWPR
Trigger: TCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGT...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVTPAWI*RCPWPR
Trigger: TCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGT...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLSRWPS*NASVDL
Trigger: CAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCT...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: QTHQPHKELTRPAVSIIESRWPS*NASVDL
Trigger: CAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCT...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTCAATCAGAGCAGTTaGTCTATTTCTGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTFNQSS*SISEVH
Trigger: GTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAA...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCGTTTGTCATGTGGATaGAGCTTGGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: VPPRAQQQACHPPSYPSARLSCG*SLAAIS
Trigger: AGAAATGGCTGCCAAGCTGCATCCACATGACAAACG...AGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR GCA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCCCCTGGATGAAACTTTaGACGATTTCAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: DWETNIPLPPELDPHHLSPWMKL*TISRAG
Trigger: ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGG...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCGATTTGGATTTTATGTaGGCTGCCCATTCGCGATCC +
Preference number: 4 (lower is better)
Translates to: LQEPSSKHVIHPLIQALIDLDFM*AAHSRS
Trigger: GGATCGCGAATGGGCAGCGCACATAAAATCCAAATC...GATGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTTGGTGGGAGCTTTTCTaGTATGCAGAGAATTCCGCA +
Preference number: 4 (lower is better)
Translates to: FRIALLCPDWETNIPLPPWWELF*YAENSA
Trigger: TGCGGAATTCTCTGCATAGCAGAAAAGCTCCCACCA...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGAGAGATGGCCCTTTCCTaGCATTCACTCAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGEMALS*HSLKSR
Trigger: TCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTC...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTTAAAGGTGCAGCAGAAATaGTCCTCCTTCCATGATCCC +
Preference number: 4 (lower is better)
Translates to: PPELDPHHLSKGHWTCLLKVQQK*SSFHDP
Trigger: GGGATCATGGAAGGAGGAGCATTTCTGCTGCACCTT...TAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCTGGGCTCAACCACACTaGCTTACACTTAGTAAGTGC +
Preference number: 4 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKAWAQPH*LTLSKC
Trigger: GCACTTACTAAGTGTAAGGCAGTGTGGTTGAGCCCA...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVSPPSR*PSCNAS
Trigger: GCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGA...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCCAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKAQILCS*AETLLV
Trigger: CACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTG...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VPPRAQQQACHPPSYPSAQILCS*AETLLV
Trigger: CACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTG...AGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAACAAAGCTGATCATGTaGTGCCGGCAGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PRAQQQACHPPSYPSAHLTKLIM*CRQILC
Trigger: GCAGAGAATCTGCCGGCACCACATGATCAGCTTTGT...TAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCACAAAGCTGATCATGTaGTGCCGGCAGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPTKLIM*CRQILC
Trigger: GCAGAGAATCTGCCGGCACCACATGATCAGCTTTGT...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACAAACTTGCAAGCTCCTaGCCACTTTGCGTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LCPDWETNIPLPPELDPHKLASS*PLCVCH
Trigger: ATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTT...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATGTAGGCTTGTGGCCCTaGATGAAACTTTGCACGATT +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDVGLWP*MKLCTI
Trigger: AATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCGTGGCTGTAGGCTTGTaGCCCTGGATGAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: MKPKDARVRELQRTSKGTVAVGL*PWMKLC
Trigger: GCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC...GGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCGTATGGCATCTTTATTaGAGTGGCTGTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SFAQTGRQTYPSLLNWIPVWHLY*SGCRLV
Trigger: CACAAGCCTACAGCCACTCCAATAAAGATGCCATAC...GGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTGGTTCAAGTGGGATTTaGATTTTATGTGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SLLNWIPTTFPKATGHVSGSSGI*ILCALP
Trigger: GGGCAGCGCACATAAAATCCAAATCCCACTTGAACC...AGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTTCATCTCAATGGAGATaGCCCTTTCCTGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: SLLNWIPTTFPKATGHVSSSQWR*PFPAIH
Trigger: GTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGA...AGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTGAGGCTCTGGATACCTaGACTGGAGGGCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SLKRCISALDHSALGIPSEALDT*TGGLCL
Trigger: CAAGCAGAGCCCTCCAGTCCAGGTATCCAGAGCCTC...AGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCAGAAATTCCTGCTGGTaGCTATCCCAAAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTRNSCW*LSQNFF
Trigger: GAAGAAATTTTGGGATAGCCACCAGCAGGAATTTCT...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp ATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGTCCGTTGCAGGCCCCTaGGCCCACTGCCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: IFFFSSVGSSGIWILCALSVAGP*AHCPRE
Trigger: TTCCCGTGGGCAGTGGGCTCAGGGGCCTGCAACGGA...CAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000495175.6
CDS-3UTR TCA 90 bp GATACCATGTTGATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCCGTTGCAGGCCCCTaGGCCCACTGCCCACGGGAA +
Preference number: 4 (lower is better)
Translates to: DTMLIVLAIFRNILLIIASVAGP*AHCPRE
Trigger: TTCCCGTGGGCAGTGGGCTCAGGGGCCTGCAACGGA...CGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAACATGGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
CDS-3UTR TCA 90 bp GACAGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: DSSDNNSHMSSSQISKSLAWSQR*RSHRRA
Trigger: GGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGC...CAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCAGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPAWSQR*RSHRRA
Trigger: GGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGC...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TTGATTGGAAGATACCATGTTGATAGTCCTGGCTGGGAACAGGAGGGTATCAGCGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LIGRYHVDSPGWEQEGISEDPQS*SCGAGR
Trigger: TCTGCCGGCACCACATGATCAGCTTTGTGGATCCTC...GCTGATACCCTCCTGTTCCCAGCCAGGACTATCAACATGGTATCTTCCAATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR TCA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACAGTTGCTCTATTTCTaGAGTCCACCACTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGQLLYF*SPPLCN
Trigger: ATTACACAGTGGTGGACTTCAGAAATAGAGCAACTG...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATCCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCCCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: SFAQTGRQTYPSLLNWIPPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...GGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GTAGGCTTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGAATAGCACTGCTGGTGTaGTGGACTGGAGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VGLWPWMKLCTISRAGSRIALLV*WTGGSG
Trigger: TCCAGAGCCTCCAGTCCATCACACCAGCAGTGCTAT...TCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp AACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGAAGCCATCCTCCTACCTaGGCCTTCCACGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NFARFQEQVQEQTLPTSRSHPPT*AFHVAG
Trigger: CCCAGCTACGTGGAAGGCTCAGGTAGGAGGATGGCT...TCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp CCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACCACCCAAGCTCCTTGGTATTaGCAAGAACTTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PKDARVRELQRTSKGTTTQAPWY*QELSRA
Trigger: TGCTCTGGAAAGTTCTTGTCAATACCAAGGAGCTTG...GGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
CDS-3UTR TCA 90 bp ATGGCTCAATATAATCACTGCTTGCTGCCCTCCACTGCCCTATGGATATCTTACCAGATCCCAGAGCTCTaGGTGCTGGCTGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: MAQYNHCLLPSTALWISYQIPEL*VLAVMS
Trigger: GGACATCACAGCCAGCACTCAGAGCTCTGGGATCTG...GTAAGATATCCATAGGGCAGTGGAGGGCAGCAAGCAGTGATTATATTGAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp GACAGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGACTGCCCACGGGAACTaGTCGTGCAGCCGCCACGGA +
Preference number: 4 (lower is better)
Translates to: DSSDNNSHMSSSQISKSLTAHGN*SCSRHG
Trigger: TCCGTGGCGGCTGCACGAGCAGTTCCCGTGGGCAGT...CAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
CDS-3UTR GCA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAACTGCCCACGGGAACTaGTCGTGCAGCCGCCACGGA +
Preference number: 4 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQTAHGN*SCSRHG
Trigger: TCCGTGGCGGCTGCACGAGCAGTTCCCGTGGGCAGT...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
CDS-3UTR GCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQRGRVR*RPLSPL
Trigger: CAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCT...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
CDS-3UTR GCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQAWICR*PWPRES
Trigger: TGATTCTCGGGGCCACGGGCACCGGCAAATCCACGC...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCCGTTTGTCATGTGGATaGAGCTTGGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPRLSCG*SLAAIS
Trigger: AGAAATGGCTGCCAAGCTGCATCCACATGACAAACG...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCGTTTCTTCAAAAACTTaGAAGCTCCTGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: SFAQTGRQTYPSLLNWIPVSSKT*KLLATL
Trigger: CAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAAC...GGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCGATTTGGATTTTATGTaGGCTGCCCATTCGCGATCC +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPDLDFM*AAHSRS
Trigger: GGATCGCGAATGGGCAGCGCACATAAAATCCAAATC...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CACCACCTTTCCAAAGGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCCGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: HHLSKGHWTCLLNAAFQLRIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...GAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGGAGCTTTTCTGCTATaGAGAGAATTCCGCATAGCA +
Preference number: 4 (lower is better)
Translates to: FRIALLCPDWETNIPLPPGAFLL*REFRIA
Trigger: TGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp ACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAGGAGCTTTTCTGCTATaGAGAGAATTCCGCATAGCA +
Preference number: 4 (lower is better)
Translates to: TGRQTYPSLLNWIPTTFPGAFLL*REFRIA
Trigger: TGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC...TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTGGTGGGAGCTTTTCTaGTATGCAGAGAATTCCGCA +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPWWELF*YAENSA
Trigger: TGCGGAATTCTCTGCATAGCAGAAAAGCTCCCACCA...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCCAAAGGATGCAAGGGTTATTTGCCGGTGCCCGTaGCCCCGAGAATCACTACAA +
Preference number: 4 (lower is better)
Translates to: YPSAHLELVSMKPKDARVICRCP*PRESLQ
Trigger: TTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAAT...AACCCTTGCATCCTTTGGCTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR CCA 90 bp ATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: IFFFSSVGSSGIWILCALSPPSR*PSCNAS
Trigger: GCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGA...CAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CATGTTGATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: HVDSPGYFPKHSSDYSVCSPPSR*PSCNAS
Trigger: GCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGA...ACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CTCATCTCCACTCCCACCGGGAAGATGTGGCTTCCCACCTTGTTAGGTCCTAAACAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LISTPTGKMWLPTLLGPKQILCS*AETLLV
Trigger: CACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTG...TTTAGGACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGGAGTGGAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp TCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCACCACCACTGTGTAATTaGTCACAAGAGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: SSKSPAASMSSTLLSKRSPPLCN*SQEDPQ
Trigger: TTGTGGATCCTCTTGTGACCAATTACACAGTGGTGG...TGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp ATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCTCAGTGCCCATCTCCTaGGGCTTGGTATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: MKPKDARVRELQRTSKGTSVPIS*GLVLTR
Trigger: TCTTGTCAATACCAAGCCCCAGGAGATGGGCACTGA...GGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATCATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHHVDAA*QPFLGP
Trigger: TGGACCCAGAAATGGCTGCCAAGCTGCATCCACATG...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATAAACTTGCAAGCTCCTaGCCACTTTGCGTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: ALLCPDWETNIPLPPELDKLASS*PLCVCH
Trigger: ATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTT...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCCCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SFAQTGRQTYPSLLNWIPPFFRS*LLVSSV
Trigger: CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG...GGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACCAGTAGGCTTGTGGCCCTaGATGAAACTTTGCACGATT +
Preference number: 4 (lower is better)
Translates to: SQRMQGLENFRGPPRGPPVGLWP*MKLCTI
Trigger: AATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC...TGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGTATGGCATCTTTATTaGAGTGGCTGTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: FRIALLCPDWETNIPLPPVWHLY*SGCRLV
Trigger: CACAAGCCTACAGCCACTCCAATAAAGATGCCATAC...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTGTATGGCATCTTTATTaGAGTGGCTGTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: VPPRAQQQACHPPSYPSAVWHLY*SGCRLV
Trigger: CACAAGCCTACAGCCACTCCAATAAAGATGCCATAC...AGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATCTCAGCTTCATTGTATaGCATCTTTATTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHLSFIV*HLYWSG
Trigger: GCCACTCCAATAAAGATGCCATACAATGAAGCTGAG...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGAGCCTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 4 (lower is better)
Translates to: CYGQMVQNGIPHSHSRLSLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...GCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACCTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 4 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCACTGTCTTGCCTGGATTaGTGTTTGTGTACACATGCA +
Preference number: 4 (lower is better)
Translates to: SSKSPAASMSSTLLSKRSLSCLD*CLCTHA
Trigger: TGCATGTGTACACAAACACCAATCCAGGCAAGACAG...TGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCCGACTTGGCACTGCTTaGCTCACAGTAAGTACTCAT +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPRLGTA*LTVSTH
Trigger: ATGAGTACTTACTGTGAGCCAAGCAGTGCCAAGTCG...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCCCAGATGGTACAAAATaGCATTCCTCATTCTCACTC +
Preference number: 4 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTPDGTK*HSSFSL
Trigger: GAGTGAGAATGAGGAATGCCATTTTGTACCATCTGG...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp CTCATCTCCACTCCCACCGGGAAGATGTGGCTTCCCACCTTGTTAGGTCCTAAACAGGCTGGAATGCAGTaGCATGATCATGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: LISTPTGKMWLPTLLGPKQAGMQ*HDHVSL
Trigger: CAGTGAAACATGATCATGCCACTGCATTCCAGCCTG...TTTAGGACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGGAGTGGAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATAGGCAGGCAGATCACTaGAGCCCAAAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHRQADH*SPKFET
Trigger: GGTCTCAAACTTTGGGCTCCAGTGATCTGCCTGCCT...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCCAGTGTCCGTGGCAGTaGGCAGATCCCAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPQCPWQ*ADPRAL
Trigger: CAGAGCTCTGGGATCTGCCCACTGCCACGGACACTG...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CAA 72 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAACATACCCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: FSAMQRIPHSTP*PRLGDKHTPPS
Trigger: GGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SPGYFPKHSSDYSVCENLAWSQR*RSHRRA
Trigger: GGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGC...GAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATCCTGGGGCTTGGTATTaGCAAGAACTTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHPGAWY*QELSRA
Trigger: TGCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGG...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGAGCTGGCTTAGGCGTTTGTaGAGTACAAGACCATCCTCC +
Preference number: 4 (lower is better)
Translates to: CYGQMVQNGIPHSHSRLSWLRRL*STRPSS
Trigger: GGAGGATGGTCTTGTACTTCACAAACGCCTAAGCCA...GCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp GTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: VPPRAQQQACHPPSYPSAVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...AGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCTGCATTTTCCCTCAGTaGTCAGGTACTCGTGAAATT +
Preference number: 4 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKACIFPQ*SGTREI
Trigger: AATTTCACGAGTACCTGATCACTGAGGGAAAATGCA...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCGGTGTTGACAGCATCTaGGTCCAATCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKAGVDSI*VQSSSF
Trigger: AAAAGAAGAAGATTGGACTCAGATGCTGTCAACACC...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATCTGCATTTCAGCTCTTaGTCATTCTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHLHFSS*SFCPGD
Trigger: ATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAG...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TTCAGAGCCTCAATACCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGCATCATACCCCTCCCTCCTaGACTGGATCCCCACCACCT +
Preference number: 4 (lower is better)
Translates to: FRASIPFFRSWLLVSSVHHTPPS*TGSPPP
Trigger: AGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATG...ATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHSHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GACCTCCAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACAGCTCTTACGGCCTTTaGTACTGTCTTGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: DLQGDHHLLPYVDDGEIHSSYGL*YCLAWI
Trigger: AATCCAGGCAAGACAGTATCAAAGGCCGTAAGAGCT...GTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTTCCTGGAATACAGATaGGCTGTTCTCTTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPFLEYR*AVLLLS
Trigger: GCTAAGCAAGAGAACAGCTCATCTGTATTCCAGGAA...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATACTGCCCACGGGAACTaGTCGTGCAGCCGCCACGGA +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHTAHGN*SCSRHG
Trigger: TCCGTGGCGGCTGCACGAGCAGTTCCCGTGGGCAGT...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
CDS-3UTR GCA 90 bp AATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: NNSHMSSSQISKSLVFKSRGRVR*RPLSPL
Trigger: CAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCT...GGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
CDS-3UTR GCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVRGRVR*RPLSPL
Trigger: CAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCT...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
CDS-3UTR GCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CACCACCTTTCCAAAGGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HHLSKGHWTCLLNAAFQLKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...GAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCTTCAATCAGAGCAGTTaGTCTATTTCTGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SFAQTGRQTYPSLLNWIPFNQSS*SISEVH
Trigger: GTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAA...GGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACATCTCATCTCTaGATTCCCTTTAGCCTAATT +
Preference number: 4 (lower is better)
Translates to: SFAQTGRQTYPSLLNWIPTTSHL*IPFSLI
Trigger: AATTAGGCTAAAGGGAATGCAGAGATGAGATGTGGT...GGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCACCACATCTCATCTCTaGATTCCCTTTAGCCTAATT +
Preference number: 4 (lower is better)
Translates to: DWETNIPLPPELDPHHLSTTSHL*IPFSLI
Trigger: AATTAGGCTAAAGGGAATGCAGAGATGAGATGTGGT...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp ACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCACCTTTGATACTGTCTTaGCTGGATTGGTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: TGRQTYPSLLNWIPTTFPPLILS*LDWCLC
Trigger: ACACAAACACCAATCCAGGCAAGACAGTATCAAAGG...TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGTGCTTGCCTTGGGATTaGTATGGCCAGATGGTACAA +
Preference number: 4 (lower is better)
Translates to: GAFLLCREFRIALLCPDWCLPWD*YGQMVQ
Trigger: TTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCA...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCGATGAGCTGTTCTCTTaGTTAGCCCTAAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKADELFS*LALRIK
Trigger: CTTGATTCTTAGGGCTAAGCAAGAGAACAGCTCATC...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp AAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGTGAGACTCTGTCTCTaGATGGAGTCAGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: KGTTTFFRMLTMEKFTMRVRLCL*MESALT
Trigger: CGTCAGCGCTGACTCCATGCAGAGACAGAGTCTCAC...TCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTCCTTTTGGGCTGCCTTaGTGTAGGGTGGCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERPFGLP*CRVALS
Trigger: ACTCAGGGCCACCCTACAGCAAGGCAGCCCAAAAGG...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGAGCTGCAACGCCAGCGTaGATTTGCCGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRAATPA*ICRCPW
Trigger: CCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGC...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCGCTGCAACGCCAGCGTaGATTTGCCGGTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFAATPA*ICRCPW
Trigger: CCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGC...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ATAATTGGTTCCTCCCACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: IIGSSHNNRNFVSGKYIFSPPSR*PSCNAS
Trigger: GCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGA...GAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGTGGGAGGAACCAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
CDS-3UTR CCA 90 bp GATACCATGTTGATAGTCCTGGCTGGGAACAGGAGGGTATCAGCAGATAAGCCAACAAAGCTGATCATGTaGTGCCGGCAGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DTMLIVLAGNRRVSADKPTKLIM*CRQILC
Trigger: GCAGAGAATCTGCCGGCACCACATGATCAGCTTTGT...TGGCTTATCTGCTGATACCCTCCTGTTCCCAGCCAGGACTATCAACATGGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR CCA 90 bp CCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTTAAAACTTGCAAGCTCCTaGCCACTTTGCGTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: PPELDPHHLSKGHWTCLLKLASS*PLCVCH
Trigger: ATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTT...TAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCACCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: TGRQTYPSLLNWIPTTFPPFFRS*LLVSSV
Trigger: CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG...TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTGTGGCTGTAGGCTTGTaGCCCTGGATGAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: SLKRCISALDHSALGIPSVAVGL*PWMKLC
Trigger: GCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC...AGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CTTAGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGGGTTCAAGTGGGATTTaGATTTTATGTGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSSSKSPAASMSSTLLSKGSSGI*ILCALP
Trigger: GGGCAGCGCACATAAAATCCAAATCCCACTTGAACC...CTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACTTCTTTGTTATGGTCTaGGGAAACACTCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: LCPDWETNIPLPPELDPHFFVMV*GNTLTF
Trigger: GAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAA...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: DFKSRFKNRLFPLRDIRYPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...GTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACAGAACTCCCAATATGTaGCTCACAAATACTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LCPDWETNIPLPPELDPHRTPNM*LTNTSV
Trigger: GACTGAAGTATTTGTGAGCCACATATTGGGAGTTCT...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAGCAGGCCCCACCGGGAAGATGTaGCTTCCCACCTTGTTAGGT +
Preference number: 4 (lower is better)
Translates to: KLLSFPTLNSEVIHRGAGPTGKM*LPTLLG
Trigger: ACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGG...GCCTGCTCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCGACTTGGCACTGCTTaGCTCACAGTAAGTACTCAT +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPRLGTA*LTVSTH
Trigger: ATGAGTACTTACTGTGAGCCAAGCAGTGCCAAGTCG...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTGGGCTCTGCTTGCCTTaGGATTGCTATGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLGLCLP*DCYGQM
Trigger: CATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCC...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp TGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTGGGCTCTGCTTGCCTTaGGATTGCTATGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: WPWMKLCTISRAGSRTDSGLCLP*DCYGQM
Trigger: CATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCC...AGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp GTGGCTGTAGGCTTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTATAATCACTCCCCTTTaGGGCTTCAAGGGCACCATT +
Preference number: 4 (lower is better)
Translates to: VAVGLWPWMKLCTISRAGIITPL*GFKGTI
Trigger: AATGGTGCCCTTGAAGCCCCAAAGGGGAGTGATTAT...ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CAA 72 bp TCTTCAAAAACTTGCAAGCTCCTGGCCACTTTGCGTTaGTCATGTGGATGCAGCTTGGCAGCCATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSKTCKLLATLR*SCGCSLAAISG
Trigger: CCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp ATAGTCCTGGCTGGGAACAGGAGGGTATCAGCAGATAAGCCATTGCTCCTAAAATGGCTTAGGCGTTTGTaGAGTACAAGACCATCCTCC +
Preference number: 4 (lower is better)
Translates to: IVLAGNRRVSADKPLLLKWLRRL*STRPSS
Trigger: GGAGGATGGTCTTGTACTTCACAAACGCCTAAGCCA...TTTTAGGAGCAATGGCTTATCTGCTGATACCCTCCTGTTCCCAGCCAGGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR TCA 90 bp GTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTTTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: VPPRAQQQACHPPSYPSAFLEAN*LEDTML
Trigger: CAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA...AGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: FRIALLCPDWETNIPLPPTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCAACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSKSPAASMSSTLLSKRSTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...TGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACCACCTTCTGCATTTTCCCTCAGTaGTCAGGTACTCGTGAAATT +
Preference number: 4 (lower is better)
Translates to: KDARVRELQRTSKGTTTFCIFPQ*SGTREI
Trigger: AATTTCACGAGTACCTGATCACTGAGGGAAAATGCA...GAAGGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp CCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAGGTGTTGACAGCATCTaGGTCCAATCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PRAQQQACHPPSYPSAHLGVDSI*VQSSSF
Trigger: AAAAGAAGAAGATTGGACTCAGATGCTGTCAACACC...TAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGACTTTCTATGGTGTTaGCAGCATCTGAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: GAFLLCREFRIALLCPDWDFLWC*QHLSPI
Trigger: GATTGGACTCAGATGCTGTCAACACCATAGAAAGTC...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCATAGCACTGCTGGTGTaGTGGACTGGAGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLVHLIISMEMALSCHSLIALLV*WTGGSG
Trigger: TCCAGAGCCTCCAGTCCATCACACCAGCAGTGCTAT...GAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATAGCCATCCTCCTACCTaGGCCTTCCACGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NSHMSSSQISKSLVFKSYSHPPT*AFHVAG
Trigger: CCCAGCTACGTGGAAGGCTCAGGTAGGAGGATGGCT...ATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGAAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRRGRVR*RPLSPL
Trigger: CAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCT...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
CDS-3UTR GCA 90 bp GTTGATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: VDSPGYFPKHSSDYSVCERGRVR*RPLSPL
Trigger: CAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCT...TTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
CDS-3UTR GCA 90 bp TCTTCAAAAACTTGCAAGCTCCTTGGTATTGACAAGAACTTTCCAGAGCAGAGAAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: SSKTCKLLGIDKNFPEQRSRWPS*NASVDL
Trigger: CAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCT...TCTCTGCTCTGGAAAGTTCTTGTCAATACCAAGGAGCTTGCAAGTTTTTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486825.6
CDS-3UTR GCA 90 bp CTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATGCCGGCAGATTCTCTaGTCTTGGGCAGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: LCTISRAGSRTDSSHFETCRQIL*SWAETL
Trigger: CAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCA...TGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492612.6
ENST00000648678.1
CDS-3UTR GCA 90 bp TTGATTGGAAGATACCATGTTGATAGTCCTGGCTGGGAACAGGAGGGTATCAGCAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LIGRYHVDSPGWEQEGISKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...GCTGATACCCTCCTGTTCCCAGCCAGGACTATCAACATGGTATCTTCCAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR GCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCGTTTCTTCAAAAACTTaGAAGCTCCTGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPVSSKT*KLLATL
Trigger: CAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAAC...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CTTAGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCCCTGGATGAAACTTTaGACGATTTCAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSSSKSPAASMSSTLLSKPWMKL*TISRAG
Trigger: ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGG...CTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp CACAAAGCTGATCATGTGGTGCCGGCAGATTCTCTGCTCTTGGGCAGAAACCTTCCCTGGATGAAACTTTaGACGATTTCAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HKADHVVPADSLLLGRNLPWMKL*TISRAG
Trigger: ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGG...AAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCACCACATGATCAGCTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp GGATTTTATGTGCGCTGCCCATTCGCGATCCCCAATGATGATTCGATCACAGAGGATTTGGATTTTATGTaGGCTGCCCATTCGCGATCC +
Preference number: 4 (lower is better)
Translates to: GFYVRCPFAIPNDDSITEDLDFM*AAHSRS
Trigger: GGATCGCGAATGGGCAGCGCACATAAAATCCAAATC...CTCTGTGATCGAATCATCATTGGGGATCGCGAATGGGCAGCGCACATAAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCATGTCTCTTAAACGCTaGATTTCAGCTCTTGATCAT +
Preference number: 4 (lower is better)
Translates to: DWETNIPLPPELDPHHLSMSLKR*ISALDH
Trigger: ATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACAT...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACTGGTGGGAGCTTTTCTaGTATGCAGAGAATTCCGCA +
Preference number: 4 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDWWELF*YAENSA
Trigger: TGCGGAATTCTCTGCATAGCAGAAAAGCTCCCACCA...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCACTTCTTTAAAGGGATaGAGTCAATCCTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: DWETNIPLPPELDPHHLSTSLKG*SQSWYS
Trigger: TGAATACCAGGATTGACTGCATCCCTTTAAAGAAGT...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCAAAAGGTTGATTTCATaGATGTGTGTTTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPKRLIS*MCVWGR
Trigger: CCTCCCCCAAACACACATGCATGAAATCAACCTTTT...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp AAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACCACCTTCGTTTCTTCAAAAACTTaGAAGCTCCTGCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: KDARVRELQRTSKGTTTFVSSKT*KLLHGV
Trigger: GACTCCATGCAGGAGCTTGCAAGTTTTTGAAGAAAC...GAAGGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495175.6
CDS-3UTR GCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAATCCATCCTTTTGGGCTaGCTTGCTGTAGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQSILLG*LAVGWP
Trigger: GGGCCACCCTACAGCAAGGCAGCCCAAAAGGATGGA...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGCCACCACTGTGTAATTaGTCACAAGAGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: GAFLLCREFRIALLCPDWPPLCN*SQEDPQ
Trigger: TTGTGGATCCTCTTGTGACCAATTACACAGTGGTGG...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TTGATTGGAAGATACCATGTTGATAGTCCTGGCTGGGAACAGGAGGGTATCAGCTCAGTGCCCATCTCCTaGGGCTTGGTATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: LIGRYHVDSPGWEQEGISSVPIS*GLVLTR
Trigger: TCTTGTCAATACCAAGCCCCAGGAGATGGGCACTGA...GCTGATACCCTCCTGTTCCCAGCCAGGACTATCAACATGGTATCTTCCAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR CCA 90 bp CAGAGCAGTTGCTCTATTTCTGAAGTCCACCACTGTGTAATTGGTCACAAGAGGCATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QSSCSISEVHHCVIGHKRHVDAA*QPFLGP
Trigger: TGGACCCAGAAATGGCTGCCAAGCTGCATCCACATG...CCTCTTGTGACCAATTACACAGTGGTGGACTTCAGAAATAGAGCAACTGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTGTGGCTGTAGGCTTGTaGCCCTGGATGAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSVAVGL*PWMKLC
Trigger: GCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTGTATGGCATCTTTATTaGAGTGGCTGTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPVWHLY*SGCRLV
Trigger: CACAAGCCTACAGCCACTCCAATAAAGATGCCATAC...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CTCATCTCCACTCCCACCGGGAAGATGTGGCTTCCCACCTTGTTAGGTCCTAAACTCAGCTTCATTGTATaGCATCTTTATTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LISTPTGKMWLPTLLGPKLSFIV*HLYWSG
Trigger: GCCACTCCAATAAAGATGCCATACAATGAAGCTGAG...TTTAGGACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGGAGTGGAGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: GAFLLCREFRIALLCPDWLSKGH*TCLLNA
Trigger: AGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAG...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTCCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCCCCTCCCTCCTGAACTaGATCCCCACCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SFLQLVQVGFGFYVRCPFPSLLN*IPTTFP
Trigger: TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGG...GAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGCTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 4 (lower is better)
Translates to: QTHQPHKELTRPAVSIIELLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCGGATGCAGTCAATCCTaGTATTCACCACAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPGCSQS*YSPQRR
Trigger: TCTTCTTTGTGGTGAATACCAGGATTGACTGCATCC...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCAGAACTCCCAATATGTaGCTCACAAATACTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKARTPNM*LTNTSV
Trigger: GACTGAAGTATTTGTGAGCCACATATTGGGAGTTCT...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATTCATCTCAATGGAGATaGCCCTTTCCTGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHSSQWR*PFPAIH
Trigger: GTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGA...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCATCAGTGCCCATCTCCTaGGGCTGCATGGAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPSVPIS*GCMESA
Trigger: CGCTGACTCCATGCAGCCCCAGGAGATGGGCACTGA...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441669.6
3UTR CAA 72 bp CACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTaGATCATTCTGCCCTGGGGATCCCTTCTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: HWTCLLNAAFQL*IILPWGSLLFR
Trigger: CCTAAAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TGTTTCAGAGCCTCAATACCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: CFRASIPFFRSWLLVSSVEDPQS*SCGAGR
Trigger: TCTGCCGGCACCACATGATCAGCTTTGTGGATCCTC...CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR TCA 90 bp ATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCCAGTTGCTCTATTTCTaGAGTCCACCACTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: MKPKDARVRELQRTSKGTQLLYF*SPPLCN
Trigger: ATTACACAGTGGTGGACTTCAGAAATAGAGCAACTG...GGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCCTGGGGCTTGGTATTaGCAAGAACTTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLPGAWY*QELSRA
Trigger: TGCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGG...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp ACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCATGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TGRQTYPSLLNWIPTTFPWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTTGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FRIALLCPDWETNIPLPPWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GACCTCCAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACCCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: DLQGDHHLLPYVDDGEIHPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...GTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACCAACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SQRMQGLENFRGPPRGPPTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...TGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp ATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: MKPKDARVRELQRTSKGTVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...GGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp CTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCGCGATCGCTTGTGGCCCTGGATaGAACTTTGCACGATTTCAA +
Preference number: 4 (lower is better)
Translates to: LQLVQVGFGFYVRCPFAIACGPG*NFARFQ
Trigger: TTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGC...GATCGCGAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTGGTGTTGACAGCATCTaGGTCCAATCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPGVDSI*VQSSSF
Trigger: AAAAGAAGAAGATTGGACTCAGATGCTGTCAACACC...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAGCAGGCAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: KLLSFPTLNSEVIHRGAGSHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...GCCTGCTCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp ACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCATTCTCTGTAGAATTCTaGGAACTAGTTTGGTTCACT +
Preference number: 4 (lower is better)
Translates to: TGRQTYPSLLNWIPTTFPFSVEF*ELVWFT
Trigger: AGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAA...TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGCTCCTGGCCACTTTGCGTTTGTCATGTGGATGCAGCTTGGCAGCCATTTCTGCCCTTCCTTCTAAACTaGAATTCTACACAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: SSWPLCVCHVDAAWQPFLPFLLN*NSTQLL
Trigger: TAAGAGCTGTGTAGAATTTCAGTTTAGAAGGAAGGG...CAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATCTTTGCCTTGCTCTGTaGCTGGAACATCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHLCLAL*LEHPCF
Trigger: AAAACATGGATGTTCCAGTCACAGAGCAAGGCAAAG...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTAGCTGGGCAACATTGTaGGACTCTGTCTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERSWATL*DSVSAW
Trigger: CCATGCAGAGACAGAGTCTCACAATGTTGCCCAGCT...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp TCTGAGTCCAATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: SESNLLLFFSWFKWDLDFAWICR*PWPRES
Trigger: TGATTCTCGGGGCCACGGGCACCGGCAAATCCACGC...AAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp AAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAGAGCCAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: KHSSDYSVCENLLVPPRASRWPS*NASVDL
Trigger: CAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCT...GGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp AACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGATGCCGGCAGATTCTCTaGTCTTGGGCAGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: NFARFQEQVQEQTLPTSRCRQIL*SWAETL
Trigger: CAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCA...TCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492612.6
ENST00000648678.1
CDS-3UTR GCA 90 bp CTGGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAAAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LVTSLQCAFSLSDQVLVKKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...TTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR GCA 90 bp CTTAGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGGTTTCTTCAAAAACTTaGAAGCTCCTGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: LSSSKSPAASMSSTLLSKVSSKT*KLLATL
Trigger: CAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAAC...CTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR GCA 90 bp CTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: LDETLHDFKSRFKNRLFPRIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...TGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp TGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGAGCGGAGCTTTTCTGCTATaGAGAGAATTCCGCATAGCA +
Preference number: 4 (lower is better)
Translates to: CYGQMVQNGIPHSHSRLSGAFLL*REFRIA
Trigger: TGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC...GCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp GTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTACTTCTTTAAAGGGATaGAGTCAATCCTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: VPPRAQQQACHPPSYPSATSLKG*SQSWYS
Trigger: TGAATACCAGGATTGACTGCATCCCTTTAAAGAAGT...AGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACGAGATGGCCCTTTCCTaGCATTCACTCAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDEMALS*HSLKSR
Trigger: TCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTC...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTAATTGCTTTTCAAGGTaGAGCAGAAATGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPNCFSR*SRNAPP
Trigger: AGGAGGAGCATTTCTGCTGCACCTTGAAAAGCAATT...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp GACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCTGCTTGCCTTGGGATTaGTATGGCCAGATGGTACAA +
Preference number: 4 (lower is better)
Translates to: DMSLKRCISALDHSALGICLPWD*YGQMVQ
Trigger: TTGTACCATCTGGCCATAGCAATCCCAAGGCAAGCA...GATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTATTTGCCGGTGCCCGTaGCCCCGAGAATCACTACAA +
Preference number: 4 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCICRCP*PRESLQ
Trigger: TTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAAT...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATTTGCCGGTGCCCGTaGCCCCGAGAATCACTACAA +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQICRCP*PRESLQ
Trigger: TTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAAT...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCCAAAGGATGCAAGGGTTCAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: YPSAHLELVSMKPKDARVQILCS*AETLLV
Trigger: CACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTG...AACCCTTGCATCCTTTGGCTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR CCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTACAAAGCTGATCATGTaGTGCCGGCAGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLTKLIM*CRQILC
Trigger: GCAGAGAATCTGCCGGCACCACATGATCAGCTTTGT...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACCCACCACTGTGTAATTaGTCACAAGAGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDPPLCN*SQEDPQ
Trigger: TTGTGGATCCTCTTGTGACCAATTACACAGTGGTGG...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TGTCATCCACCCTCTTATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCCACCACCACTGTGTAATTaGTCACAAGAGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: CHPPSYPSAHLELVSMKPPPLCN*SQEDPQ
Trigger: TTGTGGATCCTCTTGTGACCAATTACACAGTGGTGG...TGGCTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR CCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTTCAGTGCCCATCTCCTaGGGCTTGGTATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSSVPIS*GLVLTR
Trigger: TCTTGTCAATACCAAGCCCCAGGAGATGGGCACTGA...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCCATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPHVDAA*QPFLGP
Trigger: TGGACCCAGAAATGGCTGCCAAGCTGCATCCACATG...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTCATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERHVDAA*QPFLGP
Trigger: TGGACCCAGAAATGGCTGCCAAGCTGCATCCACATG...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATACATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SQWRWPFPAIHSNLELPIHVDAA*QPFLGP
Trigger: TGGACCCAGAAATGGCTGCCAAGCTGCATCCACATG...TATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCTCAGCTTCATTGTATaGCATCTTTATTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPLSFIV*HLYWSG
Trigger: GCCACTCCAATAAAGATGCCATACAATGAAGCTGAG...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GTGGCTGTAGGCTTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTCTCAGCTTCATTGTATaGCATCTTTATTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VAVGLWPWMKLCTISRAGLSFIV*HLYWSG
Trigger: GCCACTCCAATAAAGATGCCATACAATGAAGCTGAG...ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHLSKGH*TCLLNA
Trigger: AGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAG...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: LLNAAFQLLIILPWGSLLLSKGH*TCLLNA
Trigger: AGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAG...GAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGCTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 4 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GACCTCCAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACGGATGCAGTCAATCCTaGTATTCACCACAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: DLQGDHHLLPYVDDGEIHGCSQS*YSPQRR
Trigger: TCTTCTTTGTGGTGAATACCAGGATTGACTGCATCC...GTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp CACAAAGCTGATCATGTGGTGCCGGCAGATTCTCTGCTCTTGGGCAGAAACCTTAAGTGGGTGAGGCTCTaGAATTCAGCACTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: HKADHVVPADSLLLGRNLKWVRL*NSALFK
Trigger: TTTAAACAGTGCTGAATTCCAGAGCCTCACCCACTT...AAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCACCACATGATCAGCTTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGCCTTGCTCTGTGACTaGAACATCCATGTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQAALLCD*NIHVLG
Trigger: GCCTAAAACATGGATGTTCCAGTCACAGAGCAAGGC...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQEDPQS*SCGAGR
Trigger: TCTGCCGGCACCACATGATCAGCTTTGTGGATCCTC...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCAGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GADKTCCFYYRERETLKPEDPQS*SCGAGR
Trigger: TCTGCCGGCACCACATGATCAGCTTTGTGGATCCTC...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCAGTTGCTCTATTTCTaGAGTCCACCACTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: ACHPPSYPSAHLELVSMKQLLYF*SPPLCN
Trigger: ATTACACAGTGGTGGACTTCAGAAATAGAGCAACTG...CTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR TCA 90 bp AAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACCACCTTCTGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KDARVRELQRTSKGTTTFWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...GAAGGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp ATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: MKPKDARVRELQRTSKGTTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...GGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTTAAACGCTGCATTTTGCATTTTCCCTCAGTaGTCAGGTACTCGTGAAATT +
Preference number: 4 (lower is better)
Translates to: DPHHLSKGHWTCLLNAAFCIFPQ*SGTREI
Trigger: AATTTCACGAGTACCTGATCACTGAGGGAAAATGCA...AAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGCTTGTGGCCCTGGATaGAACTTTGCACGATTTCAA +
Preference number: 4 (lower is better)
Translates to: KGTTTFFRMLTMEKFTMRACGPG*NFARFQ
Trigger: TTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGC...TCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTTCTGGGGAAACACTCTaGCTTTCTATGGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQASGETL*LSMVLT
Trigger: TGTCAACACCATAGAAAGTCAGAGTGTTTCCCCAGA...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGCTGCATTTCAGCTCTTaGTCATTCTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMLHFSS*SFCPGD
Trigger: ATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAG...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATAAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: SQWRWPFPAIHSNLELPISHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...TATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: SLVHLIISMEMALSCHSLSHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...GAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GGAGCAGGCACAAAAGGGGAAATCTACTCAGGGCAATGCTTCAGACCAGAGCACTTCTCTGTAGAATTCTaGGAACTAGTTTGGTTCACT +
Preference number: 4 (lower is better)
Translates to: GAGTKGEIYSGQCFRPEHFSVEF*ELVWFT
Trigger: AGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAA...GTGCTCTGGTCTGAAGCATTGCCCTGAGTAGATTTCCCCTTTTGTGCCTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp AGGATCCACAAAGCTGATCATGTGGTGCCGGCAGATTCTCTGCTCTTGGGCAGATTCTCTGTAGAATTCTaGGAACTAGTTTGGTTCACT +
Preference number: 4 (lower is better)
Translates to: RIHKADHVVPADSLLLGRFSVEF*ELVWFT
Trigger: AGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAA...TCTGCCCAAGAGCAGAGAATCTGCCGGCACCACATGATCAGCTTTGTGGATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp TATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCCAAAGGATGCAAGGGTTAACAGGGTCCTGGTCTaGTTCAAGTTTCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: YPSAHLELVSMKPKDARVNRVLV*FKFLRN
Trigger: ATTCCTCAGAAACTTGAATCAGACCAGGACCCTGTT...AACCCTTGCATCCTTTGGCTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486825.6
CDS-3UTR TCA 90 bp GAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCTCTAAGCCAAGCTCCTTGGTATTaGCAAGAACTTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EQVQEQTLPTSRHQIPLSQAPWY*QELSRA
Trigger: TGCTCTGGAAAGTTCTTGTCAATACCAAGGAGCTTG...GCTTAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492612.6
CDS-3UTR GCA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp ACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TSLQCAFSLSDQVLVKFLKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...AAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR GCA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACGTTTCTTCAAAAACTTaGAAGCTCCTGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDVSSKT*KLLATL
Trigger: CAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAAC...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTGATTTGGATTTTATGTaGGCTGCCCATTCGCGATCC +
Preference number: 4 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSDLDFM*AAHSRS
Trigger: GGATCGCGAATGGGCAGCGCACATAAAATCCAAATC...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTTGGTGGGAGCTTTTCTaGTATGCAGAGAATTCCGCA +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLWWELF*YAENSA
Trigger: TGCGGAATTCTCTGCATAGCAGAAAAGCTCCCACCA...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGAGCGATGAGCTGTTCTCTTaGTTAGCCCTAAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: CYGQMVQNGIPHSHSRLSDELFS*LALRIK
Trigger: CTTGATTCTTAGGGCTAAGCAAGAGAACAGCTCATC...GCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGTGGGTCTCACCATGTTaGCTAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMWVSPC*LGWSQT
Trigger: AGTTTGAGACCAGCCTAGGCAACATGGTGAGACCCA...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp CTCATCTCCACTCCCACCGGGAAGATGTGGCTTCCCACCTTGTTAGGTCCTAAAAAATACAGAAATTCCTaGTGGTGGCTATCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LISTPTGKMWLPTLLGPKKYRNS*WWLSQN
Trigger: ATTTTGGGATAGCCACCAGCAGGAATTTCTGTATTT...TTTAGGACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGGAGTGGAGATGAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATATTTGCCGGTGCCCGTaGCCCCGAGAATCACTACAA +
Preference number: 4 (lower is better)
Translates to: NSHMSSSQISKSLVFKSYICRCP*PRESLQ
Trigger: TTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAAT...ATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTACAAAGCTGATCATGTaGTGCCGGCAGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERTKLIM*CRQILC
Trigger: GCAGAGAATCTGCCGGCACCACATGATCAGCTTTGT...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTACAAAGCTGATCATGTaGTGCCGGCAGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSLQCAFSLSDQVLVKFLTKLIM*CRQILC
Trigger: GCAGAGAATCTGCCGGCACCACATGATCAGCTTTGT...AAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACCCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDPFFRS*LLVSSV
Trigger: CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CAAGACAAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAGTGGCTGTAGGCTTGTaGCCCTGGATGAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: QDKLLSFPTLNSEVIHRGVAVGL*PWMKLC
Trigger: GCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC...TCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTTGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTTCAGTTGGTTCAAGTaGGATTTGGATTTTATGTGC +
Preference number: 4 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPFSWFK*DLDFMC
Trigger: GCACATAAAATCCAAATCCCACTTGAACCAACTGAA...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACCACCTTCTTCAGTTGGTTCAAGTaGGATTTGGATTTTATGTGC +
Preference number: 4 (lower is better)
Translates to: KDARVRELQRTSKGTTTFFSWFK*DLDFMC
Trigger: GCACATAAAATCCAAATCCCACTTGAACCAACTGAA...GAAGGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCCTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 4 (lower is better)
Translates to: SFLQLVQVGFGFYVRCPFLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...GAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTTCATCTCAATGGAGATaGCCCTTTCCTGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLSSQWR*PFPAIH
Trigger: GTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGA...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTGCCTTGCTCTGTGACTaGAACATCCATGTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLALLCD*NIHVLG
Trigger: GCCTAAAACATGGATGTTCCAGTCACAGAGCAAGGC...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp AGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAGAACTAGTTCTCTTTTTGTaGTGCCAGACCTGTATATTC +
Preference number: 4 (lower is better)
Translates to: RAQQQACHPPSYPSAHLELVLFL*CQTCIF
Trigger: GAATATACAGGTCTGGCACCACAAAAAGAGAACTAG...TTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp GTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATGAGGATCCACAAAGCTaGTCATGTGGTGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: VTQVITSLVLSFIVWHLYEDPQS*SCGAGR
Trigger: TCTGCCGGCACCACATGATCAGCTTTGTGGATCCTC...ATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAATGGCTTAGGCGTTTGTaGAGTACAAGACCATCCTCC +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQWLRRL*STRPSS
Trigger: GGAGGATGGTCTTGTACTTCACAAACGCCTAAGCCA...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGAACTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRTAWSA*SQRMQG
Trigger: CCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGT...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCACTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFTAWSA*SQRMQG
Trigger: CCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGT...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp ATAGTCCTGGCTGGGAACAGGAGGGTATCAGCAGATAAGCCATTGCTCCTAAAAGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: IVLAGNRRVSADKPLLLKVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...TTTTAGGAGCAATGGCTTATCTGCTGATACCCTCCTGTTCCCAGCCAGGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR TCA 90 bp TCATCCACCCTCTTATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCCAAATGCATTTTCCCTCAGTaGTCAGGTACTCGTGAAATT +
Preference number: 4 (lower is better)
Translates to: SSTLLSKRSSRTGQHEAKCIFPQ*SGTREI
Trigger: AATTTCACGAGTACCTGATCACTGAGGGAAAATGCA...TTTGGCTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR TCA 90 bp TCCAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGTGCATTTTCCCTCAGTaGTCAGGTACTCGTGAAATT +
Preference number: 4 (lower is better)
Translates to: SKGTTTFFRMLTMEKFTMCIFPQ*SGTREI
Trigger: AATTTCACGAGTACCTGATCACTGAGGGAAAATGCA...CATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGCTTGTGGCCCTGGATaGAACTTTGCACGATTTCAA +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERACGPG*NFARFQ
Trigger: TTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGC...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTGGTGTTGACAGCATCTaGGTCCAATCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLKRCISALDHSALGIPSGVDSI*VQSSSF
Trigger: AAAAGAAGAAGATTGGACTCAGATGCTGTCAACACC...AGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGGACTTTCTATGGTGTTaGCAGCATCTGAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: QTHQPHKELTRPAVSIIEDFLWC*QHLSPI
Trigger: GATTGGACTCAGATGCTGTCAACACCATAGAAAGTC...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTTCTGGGGAAACACTCTaGCTTTCTATGGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLSGETL*LSMVLT
Trigger: TGTCAACACCATAGAAAGTCAGAGTGTTTCCCCAGA...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTCTGCATTTCAGCTCTTaGTCATTCTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCLHFSS*SFCPGD
Trigger: ATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAG...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGAGGTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTCTGCATTTCAGCTCTTaGTCATTCTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: RGHTGDNFSCSQLHCMASLHFSS*SFCPGD
Trigger: ATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAG...AGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQSHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTTTCTCTGTAGAATTCTaGGAACTAGTTTGGTTCACT +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPFSVEF*ELVWFT
Trigger: AGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAA...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCATTCTCACTCCAGGCTaGGCAAATAGCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SFLQLVQVGFGFYVRCPFILTPG*ANSPKL
Trigger: GAGCTTTGGGCTATTTGCTCAGCCTGGAGTGAGAAT...GAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTTTCCTGGAATACAGATaGGCTGTTCTCTTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSFLEYR*AVLLLS
Trigger: GCTAAGCAAGAGAACAGCTCATCTGTATTCCAGGAA...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTGAAATGATCATGTTTCACTaGAGCCTCAATCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SLQCAFSLSDQVLVKFLEMIMFH*SLNLPG
Trigger: GCCTGGGAGATTGAGGCTTCAGTGAAACATGATCAT...TTCAAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp TGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTGAGCGATTCAACAAATATTTaGCTGTGTCTAGGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: CYGQMVQNGIPHSHSRLSDSTNI*LCLGAR
Trigger: CCTAGCACCTAGACACAGTCAAATATTTGTTGAATC...GCTCAGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp TATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTAGAAGCTGGTTAAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: YLLVTCFRASIPFFRSWLSRWPS*NASVDL
Trigger: CAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCT...TAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTCGTTTGTCATGTGGATaGAGCTTGGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERRLSCG*SLAAIS
Trigger: AGAAATGGCTGCCAAGCTGCATCCACATGACAAACG...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CTGGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAACCCTGGATGAAACTTTaGACGATTTCAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LVTSLQCAFSLSDQVLVKPWMKL*TISRAG
Trigger: ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGG...TTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGATTTGGATTTTATGTaGGCTGCCCATTCGCGATCC +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERDLDFM*AAHSRS
Trigger: GGATCGCGAATGGGCAGCGCACATAAAATCCAAATC...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTATGTCTCTTAAACGCTaGATTTCAGCTCTTGATCAT +
Preference number: 4 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPMSLKR*ISALDH
Trigger: ATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACAT...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GACAGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGCGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: DSSDNNSHMSSSQISKSLRIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...CAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATCGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: NSHMSSSQISKSLVFKSYRIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...ATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTGAGATGGCCCTTTCCTaGCATTCACTCAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSEMALS*HSLKSR
Trigger: TCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTC...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GAGGTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTATCTACTCAGGGCAATaGTTCAGACCAGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: EVTQVITSLVLSFIVWHLIYSGQ*FRPEHQ
Trigger: CTGGTGCTCTGGTCTGAAGCATTGCCCTGAGTAGAT...AAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp ATAATTGGTTCCTCCCACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCCTGGAGGGCTCTGCTTaGCTTGGGATTGCTATGGCC +
Preference number: 4 (lower is better)
Translates to: IIGSSHNNRNFVSGKYIFLEGSA*LGIAMA
Trigger: GGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAG...GAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGTGGGAGGAACCAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTGGACTGGAGGGCTCTaGTTGCCTTGGGATTGCTAT +
Preference number: 4 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVWTGGL*LPWDCY
Trigger: ATAGCAATCCCAAGGCAAGCAGAGCCCTCCAGTCCA...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp ATGTGGTGCCGGCAGATTCTCTGCTCTTGGGCAGAAACCTTGTTGGTGATGATGGTTTCTTCAAAAACTTaGAAGCTCCTTGGTATTGAC +
Preference number: 4 (lower is better)
Translates to: MWCRQILCSWAETLLVMMVSSKT*KLLGID
Trigger: GTCAATACCAAGGAGCTTGCAAGTTTTTGAAGAAAC...CATCATCACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCACCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486825.6
CDS-3UTR GCA 90 bp TGCTCTATTTCTGAAGTCCACCACTGTGTAATTGGTCACAAGAGGATCCACAAAATAATCACTGCTTGCTaGCCTCCACTGCCCTATGGA +
Preference number: 4 (lower is better)
Translates to: CSISEVHHCVIGHKRIHKIITAC*PPLPYG
Trigger: TCCATAGGGCAGTGGAGGGCAGCAAGCAGTGATTAT...TTTGTGGATCCTCTTGTGACCAATTACACAGTGGTGGACTTCAGAAATAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp TCCAAAGGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SKGHWTCLLNAAFQLLIIQILCS*AETLLV
Trigger: CACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTG...AATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: DFKSRFKNRLFPLRDIRYQILCS*AETLLV
Trigger: CACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTG...GTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCTCTAAGCCATCCACCACTGTGTAATTaGTCACAAGAGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: QVQEQTLPTSRHQIPLSHPPLCN*SQEDPQ
Trigger: TTGTGGATCCTCTTGTGACCAATTACACAGTGGTGG...ATGGCTTAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTAAACTTGCAAGCTCCTaGCCACTTTGCGTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLKLASS*PLCVCH
Trigger: ATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTT...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAAACTTGCAAGCTCCTaGCCACTTTGCGTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: QTHQPHKELTRPAVSIIEKLASS*PLCVCH
Trigger: ATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTT...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGCCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: QGDHHLLPYVDDGEIHYEPFFRS*LLVSSV
Trigger: CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG...CTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCGTAGGCTTGTGGCCCTaGATGAAACTTTGCACGATT +
Preference number: 4 (lower is better)
Translates to: SLVHLIISMEMALSCHSLVGLWP*MKLCTI
Trigger: AATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC...GAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGGTAGGCTTGTGGCCCTaGATGAAACTTTGCACGATT +
Preference number: 4 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMVGLWP*MKLCTI
Trigger: AATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCAGTGGCTGTAGGCTTGTaGCCCTGGATGAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPVAVGL*PWMKLC
Trigger: GCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTGTATGGCATCTTTATTaGAGTGGCTGTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLVWHLY*SGCRLV
Trigger: CACAAGCCTACAGCCACTCCAATAAAGATGCCATAC...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACTTCTTTGTTATGGTCTaGGGAAACACTCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDFFVMV*GNTLTF
Trigger: GAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAA...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CACCACCTTTCCAAAGGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTCTTTGTTATGGTCTaGGGAAACACTCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: HHLSKGHWTCLLNAAFQLFFVMV*GNTLTF
Trigger: GAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAA...GAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: QTHQPHKELTRPAVSIIELSKGH*TCLLNA
Trigger: AGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAG...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACTCCTTTGCCCAGACTaGGAGACAAACATACCCCTC +
Preference number: 4 (lower is better)
Translates to: GADKTCCFYYRERETLKPLLCPD*ETNIPL
Trigger: GAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAG...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATAGAACTCCCAATATGTaGCTCACAAATACTTCAGTC +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHRTPNM*LTNTSV
Trigger: GACTGAAGTATTTGTGAGCCACATATTGGGAGTTCT...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCAGATGGTACAAAATaGCATTCCTCATTCTCACTC +
Preference number: 4 (lower is better)
Translates to: DMSLKRCISALDHSALGIPDGTK*HSSFSL
Trigger: GAGTGAGAATGAGGAATGCCATTTTGTACCATCTGG...GATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp AAACCACAACCTTGGATTATGGCTCAATATAATCACTGCTTGCTGCCCTCCACTGCCTTGGGATTGCTATaGCCAGATGGTACAAAATGG +
Preference number: 4 (lower is better)
Translates to: KPQPWIMAQYNHCLLPSTALGLL*PDGTKW
Trigger: CCATTTTGTACCATCTGGCCATAGCAATCCCAAGGC...AGTGGAGGGCAGCAAGCAGTGATTATATTGAGCCATAATCCAAGGTTGTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp TCCAAAGGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCAGGCTGGAATGCAGTaGCATGATCATGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: SKGHWTCLLNAAFQLLIIQAGMQ*HDHVSL
Trigger: CAGTGAAACATGATCATGCCACTGCATTCCAGCCTG...AATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CAA 72 bp ATCTCCACTCCCACCGGGAAGATGTGGCTTCCCACCTaGTTAGGTCCTAAAGTAGTTAATAAACTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: ISTPTGKMWLPT*LGPKVVNKLLC
Trigger: GCAAAGAAGTTTATTAACTACTTTAGGACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGGAGTGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCATGGCTTAGGCGTTTGTaGAGTACAAGACCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPWLRRL*STRPSS
Trigger: GGAGGATGGTCTTGTACTTCACAAACGCCTAAGCCA...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTGGCTTAGGCGTTTGTaGAGTACAAGACCATCCTCC +
Preference number: 4 (lower is better)
Translates to: NNSHMSSSQISKSLVFKSWLRRL*STRPSS
Trigger: GGAGGATGGTCTTGTACTTCACAAACGCCTAAGCCA...GGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GACAGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGTGGCTTAGGCGTTTGTaGAGTACAAGACCATCCTCC +
Preference number: 4 (lower is better)
Translates to: DSSDNNSHMSSSQISKSLWLRRL*STRPSS
Trigger: GGAGGATGGTCTTGTACTTCACAAACGCCTAAGCCA...CAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GTCAGCATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGTGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VSMKPKDARVRELQRTSKWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...CTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACTGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTCCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCTCTAAGCCATCCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: QVQEQTLPTSRHQIPLSHPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...ATGGCTTAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATACTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGG +
Preference number: 4 (lower is better)
Translates to: DSPGYFPKHSSDYSVCENTAWSA*SQRMQG
Trigger: CCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGT...ATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTTTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQAFLEAN*LEDTML
Trigger: CAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp TCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTTTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: SLKRCISALDHSALGIPSFLEAN*LEDTML
Trigger: CAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA...AGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TCATCCACCCTCTTATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCCAAAACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSTLLSKRSSRTGQHEAKTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...TTTGGCTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR TCA 90 bp TGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: WPWMKLCTISRAGSRTDSVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...AGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTGCTTGTGGCCCTGGATaGAACTTTGCACGATTTCAA +
Preference number: 4 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCACGPG*NFARFQ
Trigger: TTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGC...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TCCAAAGGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTTCTGGGGAAACACTCTaGCTTTCTATGGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: SKGHWTCLLNAAFQLLIISGETL*LSMVLT
Trigger: TGTCAACACCATAGAAAGTCAGAGTGTTTCCCCAGA...AATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCTCTGGGGAAACACTCTaGCTTTCTATGGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: SLVHLIISMEMALSCHSLSGETL*LSMVLT
Trigger: TGTCAACACCATAGAAAGTCAGAGTGTTTCCCCAGA...GAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGTCTGGGGAAACACTCTaGCTTTCTATGGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMSGETL*LSMVLT
Trigger: TGTCAACACCATAGAAAGTCAGAGTGTTTCCCCAGA...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGTGTATATATTTGTGCTaGCTGGGTCTCACCATGTTG +
Preference number: 4 (lower is better)
Translates to: QTHQPHKELTRPAVSIIECIYLC*LGLTML
Trigger: CAACATGGTGAGACCCAGTCAGCACAAATATATACA...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp ATGGCTCAATATAATCACTGCTTGCTGCCCTCCACTGCCCTATGGATATCTTACTGTATATATTTGTGCTaGCTGGGTCTCACCATGTTG +
Preference number: 4 (lower is better)
Translates to: MAQYNHCLLPSTALWISYCIYLC*LGLTML
Trigger: CAACATGGTGAGACCCAGTCAGCACAAATATATACA...GTAAGATATCCATAGGGCAGTGGAGGGCAGCAAGCAGTGATTATATTGAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGATGCCGGCAGATTCTCTaGTCTTGGGCAGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRCRQIL*SWAETL
Trigger: CAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCA...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TTGATTGGAAGATACCATGTTGATAGTCCTGGCTGGGAACAGGAGGGTATCAGCTTCAATCAGAGCAGTTaGTCTATTTCTGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LIGRYHVDSPGWEQEGISFNQSS*SISEVH
Trigger: GTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAA...GCTGATACCCTCCTGTTCCCAGCCAGGACTATCAACATGGTATCTTCCAATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR GCA 90 bp CTAGAACTGGTCAGCATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGTTCAATCAGAGCAGTTaGTCTATTTCTGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LELVSMKPKDARVRELQRFNQSS*SISEVH
Trigger: GTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAA...CCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGACCAGTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR GCA 90 bp AGAGGTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTCGTTTGTCATGTGGATaGAGCTTGGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: RGHTGDNFSCSQLHCMASRLSCG*SLAAIS
Trigger: AGAAATGGCTGCCAAGCTGCATCCACATGACAAACG...AGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCGGAGCTTTTCTGCTATaGAGAGAATTCCGCATAGCA +
Preference number: 4 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPGAFLL*REFRIA
Trigger: TGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGATGGCCCTTTCCTaGCATTCACTCAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYREREMALS*HSLKSR
Trigger: TCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTC...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCAATCTACTCAGGGCAATaGTTCAGACCAGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPIYSGQ*FRPEHQ
Trigger: CTGGTGCTCTGGTCTGAAGCATTGCCCTGAGTAGAT...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp AGAATTCTTTCATCTCTACATTTACGACCACCACAAGACAAATTACTTTCCTTCCTGGAGGGCTCTGCTTaGCTTGGGATTGCTATGGCC +
Preference number: 4 (lower is better)
Translates to: RILSSLHLRPPQDKLLSFLEGSA*LGIAMA
Trigger: GGCCATAGCAATCCCAAGGCAAGCAGAGCCCTCCAG...GAAGGAAAGTAATTTGTCTTGTGGTGGTCGTAAATGTAGAGATGAAAGAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp CTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACACACTTACAACAGCACTaGCTGAACTGTGAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: LCTISRAGSRTDSSHFETHLQQH*LNCEKY
Trigger: ATACTTCTCACAGTTCAGGCAGTGCTGTTGTAAGTG...TGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATAAATACAGAAATTCCTaGTGGTGGCTATCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHKYRNS*WWLSQN
Trigger: ATTTTGGGATAGCCACCAGCAGGAATTTCTGTATTT...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp AATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTCAGTGCCCATCTCCTaGGGCTTGGTATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: NNSHMSSSQISKSLVFKSSVPIS*GLVLTR
Trigger: TCTTGTCAATACCAAGCCCCAGGAGATGGGCACTGA...GGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAGAGCCCATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: KHSSDYSVCENLLVPPRAHVDAA*QPFLGP
Trigger: TGGACCCAGAAATGGCTGCCAAGCTGCATCCACATG...GGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR CCA 90 bp AAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGACCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KGTTTFFRMLTMEKFTMRPFFRS*LLVSSV
Trigger: CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG...TCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTGGTTCAAGTGGGATTTaGATTTTATGTGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCGSSGI*ILCALP
Trigger: GGGCAGCGCACATAAAATCCAAATCCCACTTGAACC...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GGCCACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCCTTCTTTTCTTCAGTTaGTTCAAGTGGGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: GHWTCLLNAAFQLLIILPLLFFS*FKWDLD
Trigger: ATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG...GGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp CTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCGCGATCTTCTTTGTTATGGTCTaGGGAAACACTCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: LQLVQVGFGFYVRCPFAIFFVMV*GNTLTF
Trigger: GAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAA...GATCGCGAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPLSKGH*TCLLNA
Trigger: AGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAG...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTTCATCTCAATGGAGATaGCCCTTTCCTGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCSSQWR*PFPAIH
Trigger: GTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGA...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTCTGTCTTGCCTGGATTaGTGTTTGTGTACACATGCA +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERLSCLD*CLCTHA
Trigger: TGCATGTGTACACAAACACCAATCCAGGCAAGACAG...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp GTAGGCTTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGATACAGAAATTCCTGCTaGTGGCTATCCCAAAATTTC +
Preference number: 4 (lower is better)
Translates to: VGLWPWMKLCTISRAGSRYRNSC*WLSQNF
Trigger: GAAATTTTGGGATAGCCACCAGCAGGAATTTCTGTA...TCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CAA 72 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTaGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: NSHMSSSQISKS*VFKSYVTASSV
Trigger: GACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCAGTTGCTCTATTTCTaGAGTCCACCACTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: DFKSRFKNRLFPLRDIRYQLLYF*SPPLCN
Trigger: ATTACACAGTGGTGGACTTCAGAAATAGAGCAACTG...GTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492612.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATCCTGGGGCTTGGTATTaGCAAGAACTTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VTQVITSLVLSFIVWHLYPGAWY*QELSRA
Trigger: TGCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGG...ATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTGAACCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: SLQCAFSLSDQVLVKFLEPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...TTCAAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATTTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: GTTTFFRMLTMEKFTMRDFLEAN*LEDTML
Trigger: CAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA...ATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAATCTGGGGAAACACTCTaGCTTTCTATGGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQSGETL*LSMVLT
Trigger: TGTCAACACCATAGAAAGTCAGAGTGTTTCCCCAGA...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATCTGCATTTCAGCTCTTaGTCATTCTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHLHFSS*SFCPGD
Trigger: ATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAG...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGACTGCATTTCAGCTCTTaGTCATTCTGCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRLHFSS*SFCPGD
Trigger: ATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAG...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TGCTCTATTTCTGAAGTCCACCACTGTGTAATTGGTCACAAGAGGATCCACAAACAAGCTCCTTGGTATTaGCAAGAACTTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CSISEVHHCVIGHKRIHKQAPWY*QELSRA
Trigger: TGCTCTGGAAAGTTCTTGTCAATACCAAGGAGCTTG...TTTGTGGATCCTCTTGTGACCAATTACACAGTGGTGGACTTCAGAAATAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486825.6
CDS-3UTR GCA 90 bp ATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTGCCGGCAGATTCTCTaGTCTTGGGCAGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: IVLAIFRNILLIIASVKICRQIL*SWAETL
Trigger: CAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCA...GATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR GCA 90 bp GATACCATGTTGATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: DTMLIVLAIFRNILLIIAKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...CGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAACATGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR GCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GTTCCTCCCACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCAATCAGAAAGCTGATCATGTGGTaGCGGCAGATTCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VPPTTIGILSRANISSIRKLIMW*RQILCS
Trigger: AGAGCAGAGAATCTGCCGGCACCACATGATCAGCTT...TCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGTGGGAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
CDS-3UTR GCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTTTCAATCAGAGCAGTTaGTCTATTTCTGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSFNQSS*SISEVH
Trigger: GTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAA...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAGCAGGCTTCAATCAGAGCAGTTaGTCTATTTCTGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: KLLSFPTLNSEVIHRGAGFNQSS*SISEVH
Trigger: GTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAA...GCCTGCTCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp GGGGCTTTGGAGATGGACCTAGTTGAGCCATTTCATCTATTTTCCGAAACATTCGTTTCTTCAAAAACTTaGAAGCTCCTGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: GALEMDLVEPFHLFSETFVSSKT*KLLATL
Trigger: CAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAAC...GAATGTTTCGGAAAATAGATGAAATGGCTCAACTAGGTCCATCTCCAAAGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR GCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAACCCTGGATGAAACTTTaGACGATTTCAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQPWMKL*TISRAG
Trigger: ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGG...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CTGAGTCCAATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTACGCATAGCACTCCTTTaGCCAGACTGGGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: LSPIFFFSSVGSSGIWILRIALL*PDWETN
Trigger: GTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCG...TAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp CTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACCTTTGATACTGTCTTaGCTGGATTGGTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LDETLHDFKSRFKNRLFPPLILS*LDWCLC
Trigger: ACACAAACACCAATCCAGGCAAGACAGTATCAAAGG...TGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp AACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGATTCTTCCCTACAAACTaGCAGCTTAACACAGTGCTT +
Preference number: 4 (lower is better)
Translates to: NFARFQEQVQEQTLPTSRFFPTN*QLNTVL
Trigger: AAGCACTGTGTTAAGCTGGCAGTTTGTAGGGAAGAA...TCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp AGTTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCCACTTACAACAGCACTaGCTGAACTGTGAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SLVHLIISMEMALSCHSLHLQQH*LNCEKY
Trigger: ATACTTCTCACAGTTCAGGCAGTGCTGTTGTAAGTG...GAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp CTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATTCCTGTTTCTTTGGGTCTCACCATGTTaGCTAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LLPYVDDGEIHYERFLFLWVSPC*LGWSQT
Trigger: AGTTTGAGACCAGCCTAGGCAACATGGTGAGACCCA...AAGAAACAGGAATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGAAAAGGTTGATTTCATaGATGTGTGTTTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMKRLIS*MCVWGR
Trigger: CCTCCCCCAAACACACATGCATGAAATCAACCTTTT...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp CAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCTCTACTTCAATCACTTTCTTaGCTCAATGGATTACACCTG +
Preference number: 4 (lower is better)
Translates to: QEQVQEQTLPTSRHQIPLLQSLS*LNGLHL
Trigger: CAGGTGTAATCCATTGAGGCAAGAAAGTGATTGAAG...TAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp GTTCCTCCCACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCAATCAGAACAAAGCTGATCATGTaGTGCCGGCAGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VPPTTIGILSRANISSIRTKLIM*CRQILC
Trigger: GCAGAGAATCTGCCGGCACCACATGATCAGCTTTGT...TCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGTGGGAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
CDS-3UTR CCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGATCAGTGCCCATCTCCTaGGGCTTGGTATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRSVPIS*GLVLTR
Trigger: TCTTGTCAATACCAAGCCCCAGGAGATGGGCACTGA...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CGGGCAAATATATCTTCAATCAGAGCAGTTGCTCTATTTCTGAAGTCCACCACTAAACTTGCAAGCTCCTaGCCACTTTGCGTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RANISSIRAVALFLKSTTKLASS*PLCVCH
Trigger: ATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTT...AGTGGTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAAGATATATTTGCCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp AACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: NFARFQEQVQEQTLPTSRPFFRS*LLVSSV
Trigger: CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG...TCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCAGTAGGCTTGTGGCCCTaGATGAAACTTTGCACGATT +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPVGLWP*MKLCTI
Trigger: AATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCGTGGCTGTAGGCTTGTaGCCCTGGATGAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: IVLAIFRNILLIIASVKIVAVGL*PWMKLC
Trigger: GCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC...GATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATACTCAGCTTCATTGTATaGCATCTTTATTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SQWRWPFPAIHSNLELPILSFIV*HLYWSG
Trigger: GCCACTCCAATAAAGATGCCATACAATGAAGCTGAG...TATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCGGTTCAAGTGGGATTTaGATTTTATGTGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: NNSHMSSSQISKSLVFKSGSSGI*ILCALP
Trigger: GGGCAGCGCACATAAAATCCAAATCCCACTTGAACC...GGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGGTTCAAGTGGGATTTaGATTTTATGTGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: NSHMSSSQISKSLVFKSYGSSGI*ILCALP
Trigger: GGGCAGCGCACATAAAATCCAAATCCCACTTGAACC...ATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GTAGGCTTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGATTCAGTTGGTTCAAGTaGGATTTGGATTTTATGTGC +
Preference number: 4 (lower is better)
Translates to: VGLWPWMKLCTISRAGSRFSWFK*DLDFMC
Trigger: GCACATAAAATCCAAATCCCACTTGAACCAACTGAA...TCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATAGGATGCAGTCAATCCTaGTATTCACCACAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SQWRWPFPAIHSNLELPIGCSQS*YSPQRR
Trigger: TCTTCTTTGTGGTGAATACCAGGATTGACTGCATCC...TATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCAGCCTTGGGATTGCTATaGCCAGATGGTACAAAATGG +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPALGLL*PDGTKW
Trigger: CCATTTTGTACCATCTGGCCATAGCAATCCCAAGGC...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAACAGTTGCTCTATTTCTaGAGTCCACCACTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQQLLYF*SPPLCN
Trigger: ATTACACAGTGGTGGACTTCAGAAATAGAGCAACTG...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GGGGCTTTGGAGATGGACCTAGTTGAGCCATTTCATCTATTTTCCGAAACATTCACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GALEMDLVEPFHLFSETFTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...GAATGTTTCGGAAAATAGATGAAATGGCTCAACTAGGTCCATCTCCAAAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR TCA 90 bp ACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TSLQCAFSLSDQVLVKFLTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...AAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATGCTTGTGGCCCTGGATaGAACTTTGCACGATTTCAA +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHACGPG*NFARFQ
Trigger: TTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGC...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTGGTGTTGACAGCATCTaGGTCCAATCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCGVDSI*VQSSSF
Trigger: AAAAGAAGAAGATTGGACTCAGATGCTGTCAACACC...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAGGTGTTGACAGCATCTaGGTCCAATCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQGVDSI*VQSSSF
Trigger: AAAAGAAGAAGATTGGACTCAGATGCTGTCAACACC...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CTGAGTCCAATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTAAGCCACACAAGGAGCTaGCAAGACCTGCTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LSPIFFFSSVGSSGIWILSHTRS*QDLLFL
Trigger: TAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCT...TAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGTTCTCTGTAGAATTCTaGGAACTAGTTTGGTTCACT +
Preference number: 4 (lower is better)
Translates to: QTHQPHKELTRPAVSIIEFSVEF*ELVWFT
Trigger: AGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAA...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTATAATAACTCACACATaGGCAGCTCGCAAATTTCAA +
Preference number: 4 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLIITHT*AARKFQ
Trigger: TTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTAT...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGAAGCTCTTACGGCCTTTaGTACTGTCTTGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRSSYGL*YCLAWI
Trigger: AATCCAGGCAAGACAGTATCAAAGGCCGTAAGAGCT...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTCAATTTCTAAGAATATaGACAGTGGGCTCAACCACA +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERQFLRI*TVGSTT
Trigger: TGTGGTTGAGCCCACTGTTCATATTCTTAGAAATTG...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTAACCTAATAGCTCACTaGGTATTGGAATTAATTGCC +
Preference number: 4 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSNLIAH*VLELIA
Trigger: GGCAATTAATTCCAATACTCAGTGAGCTATTAGGTT...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp ATGGCTCAATATAATCACTGCTTGCTGCCCTCCACTGCCCTATGGATATCTTACGTCAGGAAACAATATTaGGAAATGGCAGTCTTTATG +
Preference number: 4 (lower is better)
Translates to: MAQYNHCLLPSTALWISYVRKQY*EMAVFM
Trigger: CATAAAGACTGCCATTTCTCAATATTGTTTCCTGAC...GTAAGATATCCATAGGGCAGTGGAGGGCAGCAAGCAGTGATTATATTGAGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp TTTACAATTTCTAAGAATATGAACAGTGGGCTCAACCACACTGCCTTACACTTAAAGGTGCAGCAGAAATaGTCCTCCTTCCATGATCCC +
Preference number: 4 (lower is better)
Translates to: FTISKNMNSGLNHTALHLKVQQK*SSFHDP
Trigger: GGGATCATGGAAGGAGGAGCATTTCTGCTGCACCTT...TAAGTGTAAGGCAGTGTGGTTGAGCCCACTGTTCATATTCTTAGAAATTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp TTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTAGATGGGCTCAACCACACTaGCTTACACTTAGTAAGTGC +
Preference number: 4 (lower is better)
Translates to: FRAYLLVTCFRASIPFFRWAQPH*LTLSKC
Trigger: GCACTTACTAAGTGTAAGGCAGTGTGGTTGAGCCCA...TCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp CATGTTGATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTCAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: HVDSPGYFPKHSSDYSVCQILCS*AETLLV
Trigger: CACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTG...ACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TTGTTTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTCAGATTCTCTGCTCTTaGGCAGAAACCTTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LFPGISLSYLFQSLNTFLQILCS*AETLLV
Trigger: CACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTG...AAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp GACAGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGCCACCACTGTGTAATTaGTCACAAGAGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: DSSDNNSHMSSSQISKSLPPLCN*SQEDPQ
Trigger: TTGTGGATCCTCTTGTGACCAATTACACAGTGGTGG...CAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACCACCACTGTGTAATTaGTCACAAGAGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: GADKTCCFYYRERETLKPPPLCN*SQEDPQ
Trigger: TTGTGGATCCTCTTGTGACCAATTACACAGTGGTGG...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATTCCTGTTTCCCACCACTGTGTAATTaGTCACAAGAGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: TFFRMLTMEKFTMRDSCFPPLCN*SQEDPQ
Trigger: TTGTGGATCCTCTTGTGACCAATTACACAGTGGTGG...GAAACAGGAATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCCCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SFLQLVQVGFGFYVRCPFPFFRS*LLVSSV
Trigger: CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG...GAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TTCAGAGCCTCAATACCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGCATCCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: FRASIPFFRSWLLVSSVHPFFRS*LLVSSV
Trigger: CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG...ATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCCTCAGCTTCATTGTATaGCATCTTTATTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SFLQLVQVGFGFYVRCPFLSFIV*HLYWSG
Trigger: GCCACTCCAATAAAGATGCCATACAATGAAGCTGAG...GAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCGGTTCAAGTGGGATTTaGATTTTATGTGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFGSSGI*ILCALP
Trigger: GGGCAGCGCACATAAAATCCAAATCCCACTTGAACC...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGCTTCTTTTCTTCAGTTaGTTCAAGTGGGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: QTHQPHKELTRPAVSIIELLFFS*FKWDLD
Trigger: ATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGACTTCTTTTCTTCAGTTaGTTCAAGTGGGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: KGTTTFFRMLTMEKFTMRLLFFS*FKWDLD
Trigger: ATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG...TCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTGAATTCTTTGTTATGGTCTaGGGAAACACTCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: SLQCAFSLSDQVLVKFLEFFVMV*GNTLTF
Trigger: GAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAA...TTCAAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: NNSHMSSSQISKSLVFKSLSKGH*TCLLNA
Trigger: AGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAG...GGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATTCCTGTTTCCTTTCCAAAGGCCACTaGACATGTCTCTTAAACGCT +
Preference number: 4 (lower is better)
Translates to: TFFRMLTMEKFTMRDSCFLSKGH*TCLLNA
Trigger: AGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAG...GAAACAGGAATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCGGATGCAGTCAATCCTaGTATTCACCACAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SFLQLVQVGFGFYVRCPFGCSQS*YSPQRR
Trigger: TCTTCTTTGTGGTGAATACCAGGATTGACTGCATCC...GAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAGAGCCTCATCTCAATGGAGATaGCCCTTTCCTGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: KHSSDYSVCENLLVPPRASSQWR*PFPAIH
Trigger: GTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGA...GGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp CAAGACAAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAAAGTGGGTGAGGCTCTaGAATTCAGCACTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: QDKLLSFPTLNSEVIHRGKWVRL*NSALFK
Trigger: TTTAAACAGTGCTGAATTCCAGAGCCTCACCCACTT...TCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTTGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTAGAAATTCCTGCTGGTaGCTATCCCAAAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: TSATQGADKTCCFYYRERRNSCW*LSQNFF
Trigger: GAAGAAATTTTGGGATAGCCACCAGCAGGAATTTCT...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCACTTTCTTGCCTCAATaGATTACACCTGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SLVHLIISMEMALSCHSLTFLPQ*ITPALK
Trigger: TTTCAAGGCAGGTGTAATCCATTGAGGCAAGAAAGT...GAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATCAGTTGCTCTATTTCTaGAGTCCACCACTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: NSHMSSSQISKSLVFKSYQLLYF*SPPLCN
Trigger: ATTACACAGTGGTGGACTTCAGAAATAGAGCAACTG...ATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTGAATGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLQCAFSLSDQVLVKFLEWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...TTCAAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAATTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQFLEAN*LEDTML
Trigger: CAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCATGCATTTTCCCTCAGTaGTCAGGTACTCGTGAAATT +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPCIFPQ*SGTREI
Trigger: AATTTCACGAGTACCTGATCACTGAGGGAAAATGCA...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTGCATTTTCCCTCAGTaGTCAGGTACTCGTGAAATT +
Preference number: 4 (lower is better)
Translates to: NNSHMSSSQISKSLVFKSCIFPQ*SGTREI
Trigger: AATTTCACGAGTACCTGATCACTGAGGGAAAATGCA...GGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp ATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCGCTTGTGGCCCTGGATaGAACTTTGCACGATTTCAA +
Preference number: 4 (lower is better)
Translates to: IVLAIFRNILLIIASVKIACGPG*NFARFQ
Trigger: TTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGC...GATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGAGACTTTCTATGGTGTTaGCAGCATCTGAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRDFLWC*QHLSPI
Trigger: GATTGGACTCAGATGCTGTCAACACCATAGAAAGTC...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATTGGACTTTCTATGGTGTTaGCAGCATCTGAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: HTGDNFSCSQLHCMASLLDFLWC*QHLSPI
Trigger: GATTGGACTCAGATGCTGTCAACACCATAGAAAGTC...CAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGATAATAACTCACACATaGGCAGCTCGCAAATTTCAA +
Preference number: 4 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMIITHT*AARKFQ
Trigger: TTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTAT...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAATTCAATCAGAGCAGTTaGTCTATTTCTGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQFNQSS*SISEVH
Trigger: GTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAA...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CGGGCAAATATATCTTCAATCAGAGCAGTTGCTCTATTTCTGAAGTCCACCACTTTCAATCAGAGCAGTTaGTCTATTTCTGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: RANISSIRAVALFLKSTTFNQSS*SISEVH
Trigger: GTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAA...AGTGGTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAAGATATATTTGCCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
CDS-3UTR GCA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCAGTTTCTTCAAAAACTTaGAAGCTCCTGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: GADKTCCFYYRERETLKPVSSKT*KLLATL
Trigger: CAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAAC...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGACCCTGGATGAAACTTTaGACGATTTCAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRPWMKL*TISRAG
Trigger: ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGG...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp TTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCATGGTGGGAGCTTTTCTaGTATGCAGAGAATTCCGCA +
Preference number: 4 (lower is better)
Translates to: FPKHSSDYSVCENLLVPPWWELF*YAENSA
Trigger: TGCGGAATTCTCTGCATAGCAGAAAAGCTCCCACCA...TGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp CCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCGTTTCTTCAAAAACTTaGAAGCTCCTTGGTATTGAC +
Preference number: 4 (lower is better)
Translates to: PFFRSWLLVSSVHFPSVIVSSKT*KLLGID
Trigger: GTCAATACCAAGGAGCTTGCAAGTTTTTGAAGAAAC...GATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
CDS-3UTR GCA 90 bp CAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTGAAGCCAATGTTTCTTCAAAAACTTaGAAGCTCCTTGGTATTGAC +
Preference number: 4 (lower is better)
Translates to: QCAFSLSDQVLVKFLEANVSSKT*KLLGID
Trigger: GTCAATACCAAGGAGCTTGCAAGTTTTTGAAGAAAC...ATTGGCTTCAAGGAATTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
CDS-3UTR GCA 90 bp TTTTGTTTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCAATATAATCACTGCTTaGTGCCCTCCACTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: FCFRAYLLVTCFRASIPFNIITA*CPPLPY
Trigger: ATAGGGCAGTGGAGGGCAGCAAGCAGTGATTATATT...GAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATGTATGGCATCTTTATTaGAGTGGCTGTAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHVWHLY*SGCRLV
Trigger: CACAAGCCTACAGCCACTCCAATAAAGATGCCATAC...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTTCAGTTGGTTCAAGTaGGATTTGGATTTTATGTGC +
Preference number: 4 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPFSWFK*DLDFMC
Trigger: GCACATAAAATCCAAATCCCACTTGAACCAACTGAA...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGCTTCTTTTCTTCAGTTaGTTCAAGTGGGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMLLFFS*FKWDLD
Trigger: ATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAAGAACTCCCAATATGTaGCTCACAAATACTTCAGTC +
Preference number: 4 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQRTPNM*LTNTSV
Trigger: GACTGAAGTATTTGTGAGCCACATATTGGGAGTTCT...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGAGGTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTATCAAGCCATATTCCTaGAATACAGATGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RGHTGDNFSCSQLHCMASIKPYS*NTDELF
Trigger: GAACAGCTCATCTGTATTCCAGGAATATGGCTTGAT...AGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGACCTCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp AAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAGAGCCCAGTTGCTCTATTTCTaGAGTCCACCACTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: KHSSDYSVCENLLVPPRAQLLYF*SPPLCN
Trigger: ATTACACAGTGGTGGACTTCAGAAATAGAGCAACTG...GGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR TCA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTTGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAGAGCCCCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: KHSSDYSVCENLLVPPRAPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...GGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCCCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: SPGYFPKHSSDYSVCENLPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...GAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp CATGTTGATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTCCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: HVDSPGYFPKHSSDYSVCPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...ACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCATTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPFLEAN*LEDTML
Trigger: CAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp ACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATTCCTGTTTCTTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: TFFRMLTMEKFTMRDSCFFLEAN*LEDTML
Trigger: CAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA...GAAACAGGAATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGAGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GTTCCTCCCACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCAATCAGAGTGATCAGGTACTCGTaGAATTCCTTGAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: VPPTTIGILSRANISSIRVIRYS*NSLKPI
Trigger: AATTGGCTTCAAGGAATTTCACGAGTACCTGATCAC...TCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGTGGGAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATTGCATTTTCCCTCAGTaGTCAGGTACTCGTGAAATT +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHCIFPQ*SGTREI
Trigger: AATTTCACGAGTACCTGATCACTGAGGGAAAATGCA...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CTGAGTCCAATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTAGACTTTCTATGGTGTTaGCAGCATCTGAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: LSPIFFFSSVGSSGIWILDFLWC*QHLSPI
Trigger: GATTGGACTCAGATGCTGTCAACACCATAGAAAGTC...TAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp CTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATATAATAACTCACACATaGGCAGCTCGCAAATTTCAA +
Preference number: 4 (lower is better)
Translates to: LLFFSWFKWDLDFMCAAHIITHT*AARKFQ
Trigger: TTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTAT...ATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAACCCTTCCTTCTAAACTaGAATTCTACACAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQPFLLN*NSTQLL
Trigger: TAAGAGCTGTGTAGAATTTCAGTTTAGAAGGAAGGG...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCCAATTTCTAAGAATATaGACAGTGGGCTCAACCACA +
Preference number: 4 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVQFLRI*TVGSTT
Trigger: TGTGGTTGAGCCCACTGTTCATATTCTTAGAAATTG...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp CTGAGTCCAATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTAGGATTACACCTGCCTTaGAAACCACAACCTTGGATT +
Preference number: 4 (lower is better)
Translates to: LSPIFFFSSVGSSGIWILGLHLP*KPQPWI
Trigger: AATCCAAGGTTGTGGTTTTCAAGGCAGGTGTAATCC...TAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATGTTTCTTCAAAAACTTaGAAGCTCCTGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHVSSKT*KLLATL
Trigger: CAAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAAC...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCAGGCCTGATTTCCAATTaGCATAGAGATAACAATGAG +
Preference number: 4 (lower is better)
Translates to: GADKTCCFYYRERETLKPGLISN*HRDNNE
Trigger: CTCATTGTTATCTCTATGGCAATTGGAAATCAGGCC...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCACCACCACTGTGTAATTaGTCACAAGAGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: FPKHSSDYSVCENLLVPPPPLCN*SQEDPQ
Trigger: TTGTGGATCCTCTTGTGACCAATTACACAGTGGTGG...TGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CCA 90 bp TTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAAACTTGCAAGCTCCTaGCCACTTTGCGTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: FPKHSSDYSVCENLLVPPKLASS*PLCVCH
Trigger: ATGACAAACGCAAAGTGGCCAGGAGCTTGCAAGTTT...TGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR CCA 90 bp ATAGGAATTTTGTCTCGGGCAAATATATCTTCAATCAGAGCAGTTGCTCTATTTGTAGGCTTGTGGCCCTaGATGAAACTTTGCACGATT +
Preference number: 4 (lower is better)
Translates to: IGILSRANISSIRAVALFVGLWP*MKLCTI
Trigger: AATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTAC...AAATAGAGCAACTGCTCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp GATACCATGTTGATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGCTCAGCTTCATTGTATaGCATCTTTATTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: DTMLIVLAIFRNILLIIALSFIV*HLYWSG
Trigger: GCCACTCCAATAAAGATGCCATACAATGAAGCTGAG...CGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAACATGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCAGAACTCCCAATATGTaGCTCACAAATACTTCAGTC +
Preference number: 4 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVRTPNM*LTNTSV
Trigger: GACTGAAGTATTTGTGAGCCACATATTGGGAGTTCT...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAATCAAGCCATATTCCTaGAATACAGATGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQIKPYS*NTDELF
Trigger: GAACAGCTCATCTGTATTCCAGGAATATGGCTTGAT...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAATACAGAAATTCCTGCTaGTGGCTATCCCAAAATTTC +
Preference number: 4 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQYRNSC*WLSQNF
Trigger: GAAATTTTGGGATAGCCACCAGCAGGAATTTCTGTA...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCATTATGAACTTTCTCTaGGTGACACCCATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFIMNFL*VTPMAS
Trigger: AGAAGCCATGGGTGTCACCCAGAGAAAGTTCATAAT...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CAA 72 bp AAATTCTACACAGCTCTTACGGCCTTTGATACTGTCTaGCCTGGATTGGTGTTTGTGTACACATGCAATTAT +
Preference number: 4 (lower is better)
Translates to: KFYTALTAFDTV*PGLVFVYTCNY
Trigger: ATAATTGCATGTGTACACAAACACCAATCCAGGCAAGACAGTATCAAAGGCCGTAAGAGCTGTGTAGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTACAATTTCTAAGAATATGAACAGTGGGCTCAACCACACTGCCTTACACTTACCTTCTTCCGTATGTTaGCGATGGAGAAATTCACTA +
Preference number: 4 (lower is better)
Translates to: FTISKNMNSGLNHTALHLPSSVC*RWRNSL
Trigger: TAGTGAATTTCTCCATCGTCAACATACGGAAGAAGG...TAAGTGTAAGGCAGTGTGGTTGAGCCCACTGTTCATATTCTTAGAAATTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp TTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTAGATTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: FRAYLLVTCFRASIPFFRFLEAN*LEDTML
Trigger: CAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA...TCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATTTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: VTQVITSLVLSFIVWHLYFLEAN*LEDTML
Trigger: CAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA...ATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR TCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGAACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATACTCGTGAAATTCCTTaGAGCCAATTGATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHTREIP*SQLIGR
Trigger: TCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGT...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GACAGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGTTCTCTGTAGAATTCTaGGAACTAGTTTGGTTCACT +
Preference number: 4 (lower is better)
Translates to: DSSDNNSHMSSSQISKSLFSVEF*ELVWFT
Trigger: AGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAA...CAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCATAATAACTCACACATaGGCAGCTCGCAAATTTCAA +
Preference number: 4 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVIITHT*AARKFQ
Trigger: TTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTAT...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp AAACATGCAGCTTCCTTTGTAAGCATTCAGAGTAGCTTTACAAATAACCAGTTACACCCGCTACATAAATaGACAGACAGCATGATCTAC +
Preference number: 4 (lower is better)
Translates to: KHAASFVSIQSSFTNNQLHPLHK*TDSMIY
Trigger: GTAGATCATGCTGTCTGTTCATTTATGTAGCGGGTG...TAACTGGTTATTTGTAAAGCTACTCTGAATGCTTACAAAGGAAGCTGCATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp ACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATTCCTGTTTCAACCTAATAGCTCACTaGGTATTGGAATTAATTGCC +
Preference number: 4 (lower is better)
Translates to: TFFRMLTMEKFTMRDSCFNLIAH*VLELIA
Trigger: GGCAATTAATTCCAATACTCAGTGAGCTATTAGGTT...GAAACAGGAATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR TCA 90 bp TTGTTTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTGATTCAACAAATATTTaGCTGTGTCTAGGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LFPGISLSYLFQSLNTFLDSTNI*LCLGAR
Trigger: CCTAGCACCTAGACACAGTCAAATATTTGTTGAATC...AAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp AATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCATGTCTCTTAAACGCTaGATTTCAGCTCTTGATCAT +
Preference number: 4 (lower is better)
Translates to: NNSHMSSSQISKSLVFKSMSLKR*ISALDH
Trigger: ATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACAT...GGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAATGTCTCTTAAACGCTaGATTTCAGCTCTTGATCAT +
Preference number: 4 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQMSLKR*ISALDH
Trigger: ATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACAT...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCACTTCTTTAAAGGGATaGAGTCAATCCTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVTSLKG*SQSWYS
Trigger: TGAATACCAGGATTGACTGCATCCCTTTAAAGAAGT...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCAACTTCTTTAAAGGGATaGAGTCAATCCTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: GADKTCCFYYRERETLKPTSLKG*SQSWYS
Trigger: TGAATACCAGGATTGACTGCATCCCTTTAAAGAAGT...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATGGCCTGATTTCCAATTaGCATAGAGATAACAATGAG +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHGLISN*HRDNNE
Trigger: CTCATTGTTATCTCTATGGCAATTGGAAATCAGGCC...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp TCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCGAACTAATACAAACATaGAGCTTCCTTTGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: SFLQLVQVGFGFYVRCPFELIQT*SFLCKH
Trigger: ATGCTTACAAAGGAAGCTGCATGTTTGTATTAGTTC...GAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp ATCCACAATCTAGTTCTCTTTTTGTGGTGCCAGACCTGTATATTCAACTGTCTATCAATGGATTACACCTaGCTTGAAAACCACAACCTT +
Preference number: 4 (lower is better)
Translates to: IHNLVLFLWCQTCIFNCLSMDYT*LENHNL
Trigger: AAGGTTGTGGTTTTCAAGGCAGGTGTAATCCATTGA...TAGACAGTTGAATATACAGGTCTGGCACCACAAAAAGAGAACTAGATTGTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp GACAGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGTTCAGTTGGTTCAAGTaGGATTTGGATTTTATGTGC +
Preference number: 4 (lower is better)
Translates to: DSSDNNSHMSSSQISKSLFSWFK*DLDFMC
Trigger: GCACATAAAATCCAAATCCCACTTGAACCAACTGAA...CAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCATTCAGTTGGTTCAAGTaGGATTTGGATTTTATGTGC +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPFSWFK*DLDFMC
Trigger: GCACATAAAATCCAAATCCCACTTGAACCAACTGAA...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAGTTGGTTCAAGTaGGATTTGGATTTTATGTGC +
Preference number: 4 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVFSWFK*DLDFMC
Trigger: GCACATAAAATCCAAATCCCACTTGAACCAACTGAA...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp AGTCAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACTTCTTTTCTTCAGTTaGTTCAAGTGGGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: SQGHKTSLKGCSQSWYSPLLFFS*FKWDLD
Trigger: ATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG...TGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATTTCTTTGTTATGGTCTaGGGAAACACTCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHFFVMV*GNTLTF
Trigger: GAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAA...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGAAGAACTCCCAATATGTaGCTCACAAATACTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRRTPNM*LTNTSV
Trigger: GACTGAAGTATTTGTGAGCCACATATTGGGAGTTCT...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CCA 90 bp ATCTTCAATCAGAGCAGTTGCTCTATTTCTGAAGTCCACCACTGTGTAATTGGTCACAACCTTGGATTATaGCTCAATATAATCACTGCT +
Preference number: 4 (lower is better)
Translates to: IFNQSSCSISEVHHCVIGHNLGL*LNIITA
Trigger: AGCAGTGATTATATTGAGCCATAATCCAAGGTTGTG...ACCAATTACACAGTGGTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
3UTR CAA 72 bp AAGGGCACAAAGTTTGTTTGGAGTGACAAAAACGTTTaGGAAATAGTGGCAACGATTGCACAACATTGTGAA +
Preference number: 4 (lower is better)
Translates to: KGTKFVWSDKNV*EIVATIAQHCE
Trigger: TTCACAATGTTGTGCAATCGTTGCCACTATTTCCAAAACGTTTTTGTCACTCCAAACAAACTTTGTGCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGATGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATATAATAACTCACACATaGGCAGCTCGCAAATTTCAA +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHIITHT*AARKFQ
Trigger: TTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTAT...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR TCA 90 bp GTTGATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAATAATAACTCACACATaGGCAGCTCGCAAATTTCAA +
Preference number: 4 (lower is better)
Translates to: VDSPGYFPKHSSDYSVCEIITHT*AARKFQ
Trigger: TTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTAT...TTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR GCA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCATGTCTCTTAAACGCTaGATTTCAGCTCTTGATCAT +
Preference number: 4 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFMSLKR*ISALDH
Trigger: ATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACAT...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp CATGTTGATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTATGTCTCTTAAACGCTaGATTTCAGCTCTTGATCAT +
Preference number: 4 (lower is better)
Translates to: HVDSPGYFPKHSSDYSVCMSLKR*ISALDH
Trigger: ATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACAT...ACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATACTTCTTTAAAGGGATaGAGTCAATCCTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: ADKTCCFYYRERETLKPHTSLKG*SQSWYS
Trigger: TGAATACCAGGATTGACTGCATCCCTTTAAAGAAGT...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR GCA 90 bp AAACATGCAGCTTCCTTTGTAAGCATTCAGAGTAGCTTTACAAATAACCAGTTATTCTTCCCTACAAACTaGCAGCTTAACACAGTGCTT +
Preference number: 4 (lower is better)
Translates to: KHAASFVSIQSSFTNNQLFFPTN*QLNTVL
Trigger: AAGCACTGTGTTAAGCTGGCAGTTTGTAGGGAAGAA...TAACTGGTTATTTGTAAAGCTACTCTGAATGCTTACAAAGGAAGCTGCATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR GCA 90 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGAACTAATACAAACATaGAGCTTCCTTTGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: NSHMSSSQISKSLVFKSYELIQT*SFLCKH
Trigger: ATGCTTACAAAGGAAGCTGCATGTTTGTATTAGTTC...ATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CCA 90 bp AAACATGCAGCTTCCTTTGTAAGCATTCAGAGTAGCTTTACAAATAACCAGTTACCTTTCTTTAGAAGCTaGTTACTAGTCTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KHAASFVSIQSSFTNNQLPFFRS*LLVSSV
Trigger: CACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG...TAACTGGTTATTTGTAAAGCTACTCTGAATGCTTACAAAGGAAGCTGCATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR TCA 90 bp TTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCATGGAGAAATTCACTATaGGAGATTCCTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FPKHSSDYSVCENLLVPPWRNSL*EIPVSS
Trigger: TGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCA...TGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000469476.2
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR GCA 90 bp TATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTAGAAGCTGGTTATTCAATCAGAGCAGTTaGTCTATTTCTGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: YLLVTCFRASIPFFRSWLFNQSS*SISEVH
Trigger: GTGGACTTCAGAAATAGAGCAACTGCTCTGATTGAA...TAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR GCA 90 bp ACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCAATCAGAGCAGTTGCTATGTCTCTTAAACGCTaGATTTCAGCTCTTGATCAT +
Preference number: 4 (lower is better)
Translates to: TTIGILSRANISSIRAVAMSLKR*ISALDH
Trigger: ATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACAT...AGCAACTGCTCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CCA 90 bp ATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCCTTCTTTTCTTCAGTTaGTTCAAGTGGGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: IVLAIFRNILLIIASVKILLFFS*FKWDLD
Trigger: ATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG...GATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS CCA 90 bp TGGGGCTGCATGGAGTCAGCGCTGACGATCTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGCGTGGATTTGCCGGTGCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: WGCMESALTISPPSR*PSCNASVDLPVPVA
Trigger: GGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGCAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441669.6
CDS GCA 90 bp CCGGTGCCCGTGGCCCCGAGAATCACTACAAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTGCCCACGGGAACTGCTCGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: PVPVAPRITTRGRVR*RPLSPLPTGTARAA
Trigger: GGCTGCACGAGCAGTTCCCGTGGGCAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCTTGTAGTGATTCTCGGGGCCACGGGCACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
CDS CCA 90 bp AGCTCCTGCATGGAGTCAGCGCTGACGATCTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGCGTGGATTTGCCGGTGCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: SSCMESALTISPPSR*PSCNASVDLPVPVA
Trigger: GGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGCAGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495175.6
CDS CCA 90 bp AGGTCCTGCATGGAGTCAGCGCTGACGATCTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGCGTGGATTTGCCGGTGCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: RSCMESALTISPPSR*PSCNASVDLPVPVA
Trigger: GGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGCAGGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541099.5
CDS GCA 90 bp ATGGAGTCAGCGCTGACGATCTCACCGCCGAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTGCCGGTGCCCGTGGCCCCGAGAATC +
Preference number: 5 (lower is better)
Translates to: MESALTISPPSRWPS*NASVDLPVPVAPRI
Trigger: GATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
ENST00000541099.5
ENST00000648678.1
CDS CCA 90 bp TGTCTCTGCATGGAGTCAGCGCTGACGATCTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGCGTGGATTTGCCGGTGCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: CLCMESALTISPPSR*PSCNASVDLPVPVA
Trigger: GGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGCAGAGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS GCA 90 bp CGCCGAGCCGCTGGCCTAGCTGCAACGCCAGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCACTACAAGAGGTAGGGTCCGTTGCA +
Preference number: 5 (lower is better)
Translates to: RRAAGLAATPAWICR*PWPRESLQEVGSVA
Trigger: TGCAACGGACCCTACCTCTTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
CDS GCA 90 bp TCTCACCGCCGAGCCGCTGGCCTAGCTGCAACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGAGAATCACTACAAGAGGTAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SHRRAAGLAATPAWI*RCPWPRESLQEVGS
Trigger: GGACCCTACCTCTTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
ENST00000541099.5
CDS CCA 90 bp CAAAACTGCATGGAGTCAGCGCTGACGATCTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGCGTGGATTTGCCGGTGCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: QNCMESALTISPPSR*PSCNASVDLPVPVA
Trigger: GGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGCAGTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486825.6
CDS CCA 90 bp AATACCTGCATGGAGTCAGCGCTGACGATCTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGCGTGGATTTGCCGGTGCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: NTCMESALTISPPSR*PSCNASVDLPVPVA
Trigger: GGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGCAGGTATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491865.5
CDS-3UTR CAA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCAACGCCAGCGTGGATTaGCCGGTGCCCGTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTNASVD*PVPVAP
Trigger: CGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTT...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACAACGCCAGCGTGGATTaGCCGGTGCCCGTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: LCPDWETNIPLPPELDPHNASVD*PVPVAP
Trigger: CGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTT...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAACGCCAGCGTGGATTaGCCGGTGCCCGTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: QGDHHLLPYVDDGEIHYENASVD*PVPVAP
Trigger: CGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTT...CTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCAAGCTCCTGGCCACTTaGCGTTTGTCATGTGGATGC +
Preference number: 5 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTKLLAT*RLSCGC
Trigger: GCATCCACATGACAAACGCAAAGTGGCCAGGAGCTT...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS GCA 90 bp CGCGCCAGGCTTTCTTACCTGGCCACTTTGCGTTTGTCATGTGGATaGAGCTTGGCAGCCATTTCTGGGTCCACCTGGCTTAGGCGTTTG +
Preference number: 5 (lower is better)
Translates to: RARLSYLATLRLSCG*SLAAISGSTWLRRL
Trigger: CAAACGCCTAAGCCAGGTGGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGTAAGAAAGCCTGGCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS-3UTR CAA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCTCATGTGGATGCAGCTaGGCAGCCATTTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: DWETNIPLPPELDPHHLSSCGCS*AAISGS
Trigger: GGACCCAGAAATGGCTGCCAAGCTGCATCCACATGA...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATTCATGTGGATGCAGCTaGGCAGCCATTTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHSCGCS*AAISGS
Trigger: GGACCCAGAAATGGCTGCCAAGCTGCATCCACATGA...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGATCATGTGGATGCAGCTaGGCAGCCATTTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGSCGCS*AAISGS
Trigger: GGACCCAGAAATGGCTGCCAAGCTGCATCCACATGA...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCCTGGCCACTTTGCGTTaGTCATGTGGATGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTLATLR*SCGCSL
Trigger: CAAGCTGCATCCACATGACAAACGCAAAGTGGCCAG...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACTGGCCACTTTGCGTTaGTCATGTGGATGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGLATLR*SCGCSL
Trigger: CAAGCTGCATCCACATGACAAACGCAAAGTGGCCAG...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATAAGCTCCTGGCCACTTaGCGTTTGTCATGTGGATGC +
Preference number: 5 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHKLLAT*RLSCGC
Trigger: GCATCCACATGACAAACGCAAAGTGGCCAGGAGCTT...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATGGAGTGGCTGTAGGCTaGTGGCCCTGGATGAAACTT +
Preference number: 5 (lower is better)
Translates to: ALLCPDWETNIPLPPELDGVAVG*WPWMKL
Trigger: AAGTTTCATCCAGGGCCACAAGCCTACAGCCACTCC...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGAGCTGCATTTCAGCTCTaGATCATTCTGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGAAFQL*IILPWG
Trigger: TCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGC...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKAPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS GCA 90 bp AAGGAATTTGGGGTCAGCGCGCCAGGCTTTCTTACCTGGCCACTTTaGGTTTGTCATGTGGATGCAGCTTGGCAGCCATTTCTGGGTCCA +
Preference number: 5 (lower is better)
Translates to: KEFGVSAPGFLTWPL*VCHVDAAWQPFLGP
Trigger: TGGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGTAAGAAAGCCTGGCGCGCTGACCCCAAATTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS-3UTR CAA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACTCCTGGGGCTTGGTATaGACAAGAACTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LCPDWETNIPLPPELDPHSWGLV*TRTFQS
Trigger: GCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGGA...GTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCTCCTGGGGCTTGGTATaGACAAGAACTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: FAQTGRQTYPSLLNWIPTSWGLV*TRTFQS
Trigger: GCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGGA...GGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTTATCATGTGGATGCAGCTaGGCAGCCATTTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: PPELDPHHLSKGHWTCLLSCGCS*AAISGS
Trigger: GGACCCAGAAATGGCTGCCAAGCTGCATCCACATGA...TAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCCTGGCCACTTTGCGTTaGTCATGTGGATGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKALATLR*SCGCSL
Trigger: CAAGCTGCATCCACATGACAAACGCAAAGTGGCCAG...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCACTGGCCACTTTGCGTTaGTCATGTGGATGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SSKSPAASMSSTLLSKRSLATLR*SCGCSL
Trigger: CAAGCTGCATCCACATGACAAACGCAAAGTGGCCAG...TGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR CAA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCAAACGCCAGCGTGGATTaGCCGGTGCCCGTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: GADKTCCFYYRERETLKPNASVD*PVPVAP
Trigger: CGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTT...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AGCAGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCAACGCCAGCGTGGATTaGCCGGTGCCCGTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: SSDNNSHMSSSQISKSLVNASVD*PVPVAP
Trigger: CGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTT...GACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTTCCTGGGGCTTGGTATaGACAAGAACTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: VPPRAQQQACHPPSYPSASWGLV*TRTFQS
Trigger: GCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGGA...AGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR CAA 90 bp GGAGCAGGCACAAAAGGGGAAATCTACTCAGGGCAATGCTTCAGACCAGAGCACAAGCTCCTGGCCACTTaGCGTTTGTCATGTGGATGC +
Preference number: 5 (lower is better)
Translates to: GAGTKGEIYSGQCFRPEHKLLAT*RLSCGC
Trigger: GCATCCACATGACAAACGCAAAGTGGCCAGGAGCTT...GTGCTCTGGTCTGAAGCATTGCCCTGAGTAGATTTCCCCTTTTGTGCCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTAACCCATCGGTTTaGTTTCCGGGCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTFNPSV*FPGISL
Trigger: AAGAGATATGCCCGGAAACAAAACCGATGGGTTAAA...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGCCCTGGATGAAACTTaGCACGATTTCAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: FRIALLCPDWETNIPLPPALDET*HDFKSR
Trigger: CCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGC...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCGCCCTGGATGAAACTTaGCACGATTTCAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SSSKSPAASMSSTLLSKRALDET*HDFKSR
Trigger: CCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGC...GCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp GTGGCTGTAGGCTTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTGGAGTGGCTGTAGGCTaGTGGCCCTGGATGAAACTT +
Preference number: 5 (lower is better)
Translates to: VAVGLWPWMKLCTISRAGGVAVG*WPWMKL
Trigger: AAGTTTCATCCAGGGCCACAAGCCTACAGCCACTCC...ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATTGGTTCAAGTGGGATTaGGATTTTATGTGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHWFKWD*DFMCAA
Trigger: GGCAGCGCACATAAAATCCAAATCCCACTTGAACCA...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCTGGTTCAAGTGGGATTaGGATTTTATGTGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: DWETNIPLPPELDPHHLSWFKWD*DFMCAA
Trigger: GGCAGCGCACATAAAATCCAAATCCCACTTGAACCA...GGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGATGGTTCAAGTGGGATTaGGATTTTATGTGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGWFKWD*DFMCAA
Trigger: GGCAGCGCACATAAAATCCAAATCCCACTTGAACCA...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCTGGTTCAAGTGGGATTaGGATTTTATGTGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: SFAQTGRQTYPSLLNWIPWFKWD*DFMCAA
Trigger: GGCAGCGCACATAAAATCCAAATCCCACTTGAACCA...GGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCGCTGCATTTCAGCTCTaGATCATTCTGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPAAFQL*IILPWG
Trigger: TCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGC...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAGCTGCATTTCAGCTCTaGATCATTCTGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: PRAQQQACHPPSYPSAHLAAFQL*IILPWG
Trigger: TCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGC...TAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTAGGGCTCTGCTTGCCTaGGGATTGCTATGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPRALLA*GLLWPD
Trigger: ATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCT...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp CAAGCTCCACTTTTCGGTCAATCACTTTCTCAGTGCCCATCTCCTGGGGCTTGGACTGGAGCCCAAAGTTaGAGACCAGCTGGGCAACAT +
Preference number: 5 (lower is better)
Translates to: QAPLFGQSLSQCPSPGAWTGAQS*RPAGQH
Trigger: ATGTTGCCCAGCTGGTCTCAAACTTTGGGCTCCAGT...CCAAGCCCCAGGAGATGGGCACTGAGAAAGTGATTGACCGAAAAGTGGAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS TCA 90 bp CAAGCAGAGCCCCAAAGGGATCAAGAGGCCAACAGGGTCCTGGTCTaGTTCAAGTTTCTGAGGAATCCAAAACTGCATGGAGTCAGCGCT +
Preference number: 5 (lower is better)
Translates to: QAEPQRDQEANRVLV*FKFLRNPKLHGVSA
Trigger: AGCGCTGACTCCATGCAGTTTTGGATTCCTCAGAAACTTGAATCAGACCAGGACCCTGTTGGCCTCTTGATCCCTTTGGGGCTCTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486825.6
CDS CCA 90 bp GGCTTTCTTACCTGGCCACTTTGCGTTTGTCATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCACCTGGCTTAGGCGTTTGTGAAGTA +
Preference number: 5 (lower is better)
Translates to: GFLTWPLCVCHVDAA*QPFLGPPGLGVCEV
Trigger: TACTTCACAAACGCCTAAGCCAGGTGGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGTAAGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS-3UTR CAA 90 bp CCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATGTCTCTTATGGGCAGAAACCTTGTaGGTGATGATGTCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: PPELDPHHLSKGHWTCLLWAETL*VMMSRP
Trigger: AGGCCTAGACATCATCACCAACAAGGTTTCTGCCCA...TAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCACCACCTTCTGGGCAGAAACCTTGTaGGTGATGATGTCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: KDARVRELQRTSKGTTTFWAETL*VMMSRP
Trigger: AGGCCTAGACATCATCACCAACAAGGTTTCTGCCCA...GAAGGTGGTGGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CAA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCTCTTGGGCAGAAACCTaGTTGGTGATGATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKASWAET*LVMMSR
Trigger: CCTAGACATCATCACCAACAAGGTTTCTGCCCAAGA...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCTTGGGCAGAAACCTaGTTGGTGATGATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: SSKSPAASMSSTLLSKRSSWAET*LVMMSR
Trigger: CCTAGACATCATCACCAACAAGGTTTCTGCCCAAGA...TGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CAA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GATACCATGTTGATAGTCCTGGCTGGGAACAGGAGGGTATCAGCAGATAAGCCATCATGTGGATGCAGCTaGGCAGCCATTTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: DTMLIVLAGNRRVSADKPSCGCS*AAISGS
Trigger: GGACCCAGAAATGGCTGCCAAGCTGCATCCACATGA...TGGCTTATCTGCTGATACCCTCCTGTTCCCAGCCAGGACTATCAACATGGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR CAA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCTGGCCACTTTGCGTTaGTCATGTGGATGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPLATLR*SCGCSL
Trigger: CAAGCTGCATCCACATGACAAACGCAAAGTGGCCAG...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp ATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGGGACCCTGGCCACTTTGCGTTaGTCATGTGGATGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: MKPKDARVRELQRTSKGTLATLR*SCGCSL
Trigger: CAAGCTGCATCCACATGACAAACGCAAAGTGGCCAG...GGTCCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATTGGTTCAAGTGGGATTaGGATTTTATGTGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: ALLCPDWETNIPLPPELDWFKWD*DFMCAA
Trigger: GGCAGCGCACATAAAATCCAAATCCCACTTGAACCA...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTCTCTTTAGGTTCTTaGTTATGGTCTGGGGAAACA +
Preference number: 5 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTFSLGS*LWSGET
Trigger: TGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAA...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: FSAMQRIPHSTPLPRLGDPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...GTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp ACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGAACATATAAAAACGACTaGGCACTGCTTGGCTCACAG +
Preference number: 5 (lower is better)
Translates to: TYPSLLNWIPTTFPKATGTYKND*ALLGSQ
Trigger: CTGTGAGCCAAGCAGTGCCAAGTCGTTTTTATATGT...TCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp AGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCCTCAAACTCCTAGGCTaGAGTGATCCTTCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: RIPHSTPLPRLGDKHTPPLKLLG*SDPSAS
Trigger: TGAGGCAGAAGGATCACTCAAGCCTAGGAGTTTGAG...GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS CCA 90 bp CTAGTTGTAAAGGAATTTGGGGTCAGCGCGCCAGGCTTTCTTACCTaGCCACTTTGCGTTTGTCATGTGGATGCAGCTTGGCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: LVVKEFGVSAPGFLT*PLCVCHVDAAWQPF
Trigger: AAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGTAAGAAAGCCTGGCGCGCTGACCCCAAATTCCTTTACAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS-3UTR CAA 90 bp GTGGCTGTAGGCTTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: VAVGLWPWMKLCTISRAGADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...ACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CAA 90 bp CTTAGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCCCATCTCCTGGGGCTaGGTATTGACAAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: LSSSKSPAASMSSTLLSKPISWG*VLTRTF
Trigger: GAAAGTTCTTGTCAATACCAAGCCCCAGGAGATGGG...CTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR CAA 90 bp TACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCACTGGACATACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 5 (lower is better)
Translates to: YPSLLNWIPTTFPKATGHTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...ATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTGCCCTGGATGAAACTTaGCACGATTTCAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPALDET*HDFKSR
Trigger: CCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGC...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQAPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp CACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: HWTCLLNAAFQLLIILPWPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...CCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp GCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCCAAATTTCAAAGTCTTaGGTCTTCAAGTCCTATGTC +
Preference number: 5 (lower is better)
Translates to: AQTGRQTYPSLLNWIPTTQISKS*VFKSYV
Trigger: GACATAGGACTTGAAGACCAAAGACTTTGAAATTTG...GGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CTCATCTCCACTCCCACCGGGAAGATGTGGCTTCCCACCTTGTTAGGTCCTAAAACTGTCTTGCCTGGATaGGTGTTTGTGTACACATGC +
Preference number: 5 (lower is better)
Translates to: LISTPTGKMWLPTLLGPKTVLPG*VFVYTC
Trigger: GCATGTGTACACAAACACCAATCCAGGCAAGACAGT...TTTAGGACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGGAGTGGAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp AGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCAAAGGCCCCTTTCCCAGGCTCTTaGCTGCTGATAAAGGAATTT +
Preference number: 5 (lower is better)
Translates to: RQTYPSLLNWIPTTFPKAPFPGS*LLIKEF
Trigger: AAATTCCTTTATCAGCAGCAAAGAGCCTGGGAAAGG...GGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTAGGGCTCTGCTTGCCTaGGGATTGCTATGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQARALLA*GLLWPD
Trigger: ATCTGGCCATAGCAATCCCAAGGCAAGCAGAGCCCT...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGCTCAAACTCCTAGGCTaGAGTGATCCTTCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: GAFLLCREFRIALLCPDWLKLLG*SDPSAS
Trigger: TGAGGCAGAAGGATCACTCAAGCCTAGGAGTTTGAG...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp CCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTCATCTAGCAAGCTCCTTGGTATaGACAAGAACTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: PRAQQQACHPPSYPSAHLASSLV*TRTFQS
Trigger: GCTCTGGAAAGTTCTTGTCAATACCAAGGAGCTTGC...TAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
CDS-3UTR CAA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTTCTTGGGCAGAAACCTaGTTGGTGATGATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPSWAET*LVMMSR
Trigger: CCTAGACATCATCACCAACAAGGTTTCTGCCCAAGA...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGTCTTGGGCAGAAACCTaGTTGGTGATGATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: GAFLLCREFRIALLCPDWSWAET*LVMMSR
Trigger: CCTAGACATCATCACCAACAAGGTTTCTGCCCAAGA...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GTCAGCATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: VSMKPKDARVRELQRTSKADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...CTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CAA 90 bp GTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCTTGTTTCTTCAAAAACTaGCAAGCTCCTGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: VPPRAQQQACHPPSYPSACFFKN*QAPGHF
Trigger: AAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAACA...AGCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR CAA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATTGTTTCTTCAAAAACTaGCAAGCTCCTGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: ALLCPDWETNIPLPPELDCFFKN*QAPGHF
Trigger: AAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAACA...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 5 (lower is better)
Translates to: ALLCPDWETNIPLPPELDTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTTTTAACCCATCGGTTTaGTTTCCGGGCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: FRIALLCPDWETNIPLPPFNPSV*FPGISL
Trigger: AAGAGATATGCCCGGAAACAAAACCGATGGGTTAAA...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GTCAGCATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGGCCCTGGATGAAACTTaGCACGATTTCAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VSMKPKDARVRELQRTSKALDET*HDFKSR
Trigger: CCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGC...CTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp ACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACGGAGTGGCTGTAGGCTaGTGGCCCTGGATGAAACTT +
Preference number: 5 (lower is better)
Translates to: TLHDFKSRFKNRLFPLRDGVAVG*WPWMKL
Trigger: AAGTTTCATCCAGGGCCACAAGCCTACAGCCACTCC...GTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTTGGTTCAAGTGGGATTaGGATTTTATGTGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPWFKWD*DFMCAA
Trigger: GGCAGCGCACATAAAATCCAAATCCCACTTGAACCA...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCGCTGCATTTCAGCTCTaGATCATTCTGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: DMSLKRCISALDHSALGIAAFQL*IILPWG
Trigger: TCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGC...GATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp CTCATCTCCACTCCCACCGGGAAGATGTGGCTTCCCACCTTGTTAGGTCCTAAAAGTATCTGTTTAACATaGCTGGCAGCTCAGGTCACT +
Preference number: 5 (lower is better)
Translates to: LISTPTGKMWLPTLLGPKSICLT*LAAQVT
Trigger: AGTGACCTGAGCTGCCAGCAATGTTAAACAGATACT...TTTAGGACCTAACAAGGTGGGAAGCCACATCTTCCCGGTGGGAGTGGAGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp AATGCTTCAGACCAGAGCACCAGGCAGATTTCTAGTGAGTGTTCTGCCTTTCCCCAGCTCTTACGGCCTTaGATACTGTCTTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: NASDQSTRQISSECSAFPQLLRP*ILSCLD
Trigger: ATCCAGGCAAGACAGTATCAAAGGCCGTAAGAGCTG...GGGAAAGGCAGAACACTCACTAGAAATCTGCCTGGTGCTCTGGTCTGAAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp AGAAGCTGGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCAGGTACTCGTGTCCCAGCTTTGCCTaGCTCTGTGACTGGAACATC +
Preference number: 5 (lower is better)
Translates to: RSWLLVSSVHFPSVIRYSCPSFA*LCDWNI
Trigger: GATGTTCCAGTCACAGAGCAAGGCAAAGCTGGGACA...CGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp ATGTGGTGCCGGCAGATTCTCTGCTCTTGGGCAGAAACCTTGTTGGTGATGATGGCAAGCTCCTTGGTATaGACAAGAACTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: MWCRQILCSWAETLLVMMASSLV*TRTFQS
Trigger: GCTCTGGAAAGTTCTTGTCAATACCAAGGAGCTTGC...CATCATCACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGCCGGCACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486825.6
CDS-3UTR CAA 90 bp TCCAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGTGGGCAGAAACCTTGTaGGTGATGATGTCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: SKGTTTFFRMLTMEKFTMWAETL*VMMSRP
Trigger: AGGCCTAGACATCATCACCAACAAGGTTTCTGCCCA...CATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CAA 90 bp GCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATTCTTGGGCAGAAACCTaGTTGGTGATGATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: AMQRIPHSTPLPRLGDKHSWAET*LVMMSR
Trigger: CCTAGACATCATCACCAACAAGGTTTCTGCCCAAGA...ATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CACTGGACATGTCTCTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: HWTCLLNAAFQLLIILPWADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...CCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TTGATTGGAAGATACCATGTTGATAGTCCTGGCTGGGAACAGGAGGGTATCAGCGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: LIGRYHVDSPGWEQEGISADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...GCTGATACCCTCCTGTTCCCAGCCAGGACTATCAACATGGTATCTTCCAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR CAA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTCCCATCTCCTGGGGCTaGGTATTGACAAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQAPISWG*VLTRTF
Trigger: GAAAGTTCTTGTCAATACCAAGCCCCAGGAGATGGG...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCATGTGGATGCAGCTaGGCAGCCATTTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPSCGCS*AAISGS
Trigger: GGACCCAGAAATGGCTGCCAAGCTGCATCCACATGA...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAAGCTCCTGGCCACTTaGCGTTTGTCATGTGGATGC +
Preference number: 5 (lower is better)
Translates to: QTHQPHKELTRPAVSIIEKLLAT*RLSCGC
Trigger: GCATCCACATGACAAACGCAAAGTGGCCAGGAGCTT...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAGCAGGCAAGCTCCTGGCCACTTaGCGTTTGTCATGTGGATGC +
Preference number: 5 (lower is better)
Translates to: KLLSFPTLNSEVIHRGAGKLLAT*RLSCGC
Trigger: GCATCCACATGACAAACGCAAAGTGGCCAGGAGCTT...GCCTGCTCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp AAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAGCAGGCTGTCCCAGCTTTGCCTaGCTCTGTGACTGGAACATC +
Preference number: 5 (lower is better)
Translates to: KLLSFPTLNSEVIHRGAGCPSFA*LCDWNI
Trigger: GATGTTCCAGTCACAGAGCAAGGCAAAGCTGGGACA...GCCTGCTCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp TTCAAAGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCAAGCTCCTGGCCACTTaGCGTTTGTCATGTGGATGC +
Preference number: 5 (lower is better)
Translates to: FKVFGLQVLCHSFLSLIPKLLAT*RLSCGC
Trigger: GCATCCACATGACAAACGCAAAGTGGCCAGGAGCTT...GGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGTGTTTCTTCAAAAACTaGCAAGCTCCTGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: GAFLLCREFRIALLCPDWCFFKN*QAPGHF
Trigger: AAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAACA...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 5 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GACCTCCAAGGGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 5 (lower is better)
Translates to: DLQGDHHLLPYVDDGEIHTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...GTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCCCTTGGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp GCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATATATCTCTTAGTTACTaGTTTCAGAGCCTCAATACC +
Preference number: 5 (lower is better)
Translates to: ALLCPDWETNIPLPPELDISLSY*FQSLNT
Trigger: GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATAT...ATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTCCCTCCTATATCTCTTAGTTACTaGTTTCAGAGCCTCAATACC +
Preference number: 5 (lower is better)
Translates to: FRIALLCPDWETNIPLPPISLSY*FQSLNT
Trigger: GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATAT...AGGAGGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTGGAGTGGCTGTAGGCTaGTGGCCCTGGATGAAACTT +
Preference number: 5 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCGVAVG*WPWMKL
Trigger: AAGTTTCATCCAGGGCCACAAGCCTACAGCCACTCC...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp ACTGGGAGACAAACATACCCCTCCCTCCTGAACTGGATCCCCACCACCTTTCCACAAATTTCAAAGTCTTaGGTCTTCAAGTCCTATGTC +
Preference number: 5 (lower is better)
Translates to: TGRQTYPSLLNWIPTTFPQISKS*VFKSYV
Trigger: GACATAGGACTTGAAGACCAAAGACTTTGAAATTTG...TGGAAAGGTGGTGGGGATCCAGTTCAGGAGGGAGGGGTATGTTTGTCTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGCGCCAAATTTCAAAGTCTTaGGTCTTCAAGTCCTATGTC +
Preference number: 5 (lower is better)
Translates to: SSSKSPAASMSSTLLSKRQISKS*VFKSYV
Trigger: GACATAGGACTTGAAGACCAAAGACTTTGAAATTTG...GCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp CAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCTCTACAGCTCTTACGGCCTTaGATACTGTCTTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: QEQVQEQTLPTSRHQIPLQLLRP*ILSCLD
Trigger: ATCCAGGCAAGACAGTATCAAAGGCCGTAAGAGCTG...TAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCCCCATCTCCTGGGGCTaGGTATTGACAAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: SLVHLIISMEMALSCHSLPISWG*VLTRTF
Trigger: GAAAGTTCTTGTCAATACCAAGCCCCAGGAGATGGG...GAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAATCATGTGGATGCAGCTaGGCAGCCATTTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQSCGCS*AAISGS
Trigger: GGACCCAGAAATGGCTGCCAAGCTGCATCCACATGA...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GATACCATGTTGATAGTCCTGGCTGGGAACAGGAGGGTATCAGCAGATAAGCCAACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 5 (lower is better)
Translates to: DTMLIVLAGNRRVSADKPTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...TGGCTTATCTGCTGATACCCTCCTGTTCCCAGCCAGGACTATCAACATGGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR CAA 90 bp GTCAGCATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTCCAAGACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 5 (lower is better)
Translates to: VSMKPKDARVRELQRTSKTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...CTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp AGCTCCTGGCCACTTTGCGTTTGTCATGTGGATGCAGCTTGGCAGCCATTTCTGATATCTCTTAGTTACTaGTTTCAGAGCCTCAATACC +
Preference number: 5 (lower is better)
Translates to: SSWPLCVCHVDAAWQPFLISLSY*FQSLNT
Trigger: GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATAT...CAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp AATGCTTCAGACCAGAGCACCAGGCAGATTTCTAGTGAGTGTTCTGCCTTTCCCTTTAACCCATCGGTTTaGTTTCCGGGCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: NASDQSTRQISSECSAFPFNPSV*FPGISL
Trigger: AAGAGATATGCCCGGAAACAAAACCGATGGGTTAAA...GGGAAAGGCAGAACACTCACTAGAAATCTGCCTGGTGCTCTGGTCTGAAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp ACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGCCCTGGATGAAACTTaGCACGATTTCAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TSATQGADKTCCFYYRERALDET*HDFKSR
Trigger: CCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGC...ACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAGGAGTGGCTGTAGGCTaGTGGCCCTGGATGAAACTT +
Preference number: 5 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQGVAVG*WPWMKL
Trigger: AAGTTTCATCCAGGGCCACAAGCCTACAGCCACTCC...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGTTCTCTTTAGGTTCTTaGTTATGGTCTGGGGAAACA +
Preference number: 5 (lower is better)
Translates to: GAFLLCREFRIALLCPDWFSLGS*LWSGET
Trigger: TGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAA...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTTTCTCTTTAGGTTCTTaGTTATGGTCTGGGGAAACA +
Preference number: 5 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPFSLGS*LWSGET
Trigger: TGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAA...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000495175.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATTCGCTGCATTTCAGCTCTaGATCATTCTGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SFLQLVQVGFGFYVRCPFAAFQL*IILPWG
Trigger: TCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGC...GAATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGGAGACAAACATACCCCTGAAAGAGGGCTTCAATaGGAAGTAATAGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: QRIPHSTPLPRLGDKHTPERGLQ*EVIDLQ
Trigger: TTGGAGATCTATTACTTCCAATTGAAGCCCTCTTTC...AGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp GGATTGCTATGGCCAGATGGTACAAAATGGCATTCCTCATTCTCACTCCAGGCTAGTATCTGTTTAACATaGCTGGCAGCTCAGGTCACT +
Preference number: 5 (lower is better)
Translates to: GLLWPDGTKWHSSFSLQASICLT*LAAQVT
Trigger: AGTGACCTGAGCTGCCAGCAATGTTAAACAGATACT...AGCCTGGAGTGAGAATGAGGAATGCCATTTTGTACCATCTGGCCATAGCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTCTTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTGCCTTTGATACTGTCTaGCCTGGATTGGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: SLWSSSPMSQLPQSDSLLAFDTV*PGLVFV
Trigger: CACAAACACCAATCCAGGCAAGACAGTATCAAAGGC...AAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp GGCTGTAGGCTTGTGGCCCTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAACTTGCAAGCTCCTaGGTATTGACAAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: GCRLVALDETLHDFKSRFKLASS*VLTRTF
Trigger: GAAAGTTCTTGTCAATACCAAGGAGCTTGCAAGTTT...GAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492612.6
CDS TCA 90 bp TTTTCCCTCAGTGATCAGGTACTCGTGAAATTCCTTGAAGCCAATTaGTTGGAAGATACCATGTTGATAGTCCTGGCTGGGAACAGGAGG +
Preference number: 5 (lower is better)
Translates to: FSLSDQVLVKFLEAN*LEDTMLIVLAGNRR
Trigger: CCTCCTGTTCCCAGCCAGGACTATCAACATGGTATCTTCCAATCAATTGGCTTCAAGGAATTTCACGAGTACCTGATCACTGAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467774.1
CDS CCA 90 bp GAGGTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATaGCATCTTTATTGGAGTGGCTGTAGGCTTGTGGCCTGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: EVTQVITSLVLSFIV*HLYWSGCRLVACSK
Trigger: TTTTGAGCAGGCCACAAGCCTACAGCCACTCCAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462797.5
CDS-3UTR CAA 90 bp TTCAGAGCCTCAATACCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGCATTGGGCAGAAACCTTGTaGGTGATGATGTCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: FRASIPFFRSWLLVSSVHWAETL*VMMSRP
Trigger: AGGCCTAGACATCATCACCAACAAGGTTTCTGCCCA...ATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGGTATTGAGGCTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CAA 90 bp CTTAAACGCTGCATTTCAGCTCTTGATCATTCTGCCCTGGGGATCCCTTCTCTTTGTTTCTTCAAAAACTaGCAAGCTCCTGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: LKRCISALDHSALGIPSLCFFKN*QAPGHF
Trigger: AAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAACA...AAGAGAAGGGATCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGCGTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462797.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CTAGAACTGGTCAGCATGAAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGAGGACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 5 (lower is better)
Translates to: LELVSMKPKDARVRELQRTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...CCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGACCAGTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS-3UTR CAA 90 bp CTTAGTTCCTCCAAGAGCCCAGCAGCAAGCATGTCATCCACCCTCTTATCCAAGATATCTCTTAGTTACTaGTTTCAGAGCCTCAATACC +
Preference number: 5 (lower is better)
Translates to: LSSSKSPAASMSSTLLSKISLSY*FQSLNT
Trigger: GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATAT...CTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp GAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCTCTAAGCTTTAACCCATCGGTTTaGTTTCCGGGCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: EQVQEQTLPTSRHQIPLSFNPSV*FPGISL
Trigger: AAGAGATATGCCCGGAAACAAAACCGATGGGTTAAA...GCTTAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAGCCCTGGATGAAACTTaGCACGATTTCAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQALDET*HDFKSR
Trigger: CCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGC...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCGGAGTGGCTGTAGGCTaGTGGCCCTGGATGAAACTT +
Preference number: 5 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFGVAVG*WPWMKL
Trigger: AAGTTTCATCCAGGGCCACAAGCCTACAGCCACTCC...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGCAAATTTCAAAGTCTTaGGTCTTCAAGTCCTATGTC +
Preference number: 5 (lower is better)
Translates to: GAFLLCREFRIALLCPDWQISKS*VFKSYV
Trigger: GACATAGGACTTGAAGACCAAAGACTTTGAAATTTG...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAGCAGGCCCTTTCCCAGGCTCTTaGCTGCTGATAAAGGAATTT +
Preference number: 5 (lower is better)
Translates to: KLLSFPTLNSEVIHRGAGPFPGS*LLIKEF
Trigger: AAATTCCTTTATCAGCAGCAAAGAGCCTGGGAAAGG...GCCTGCTCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp CCTTTCTTTAGAAGCTGGTTACTAGTCTCCAGTGTGCATTTTCCCTCAGTGATCGCAAGCTCCTTGGTATaGACAAGAACTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: PFFRSWLLVSSVHFPSVIASSLV*TRTFQS
Trigger: GCTCTGGAAAGTTCTTGTCAATACCAAGGAGCTTGC...GATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
CDS-3UTR CAA 90 bp GGAGCTTTTCTGCTATGCAGAGAATTCCGCATAGCACTCCTTTGCCCAGACTGGCATCCATCTGCCTTTTaGTATTATGAACTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: GAFLLCREFRIALLCPDWHPSAF*YYELSL
Trigger: CAGAGAAAGTTCATAATACAAAAAGGCAGATGGATG...CCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp GTTCCTCCCACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCAATCAGAAAGCTGCCCCCTGGTTaGGTTCCTTCCCTGCAAGTT +
Preference number: 5 (lower is better)
Translates to: VPPTTIGILSRANISSIRKLPPG*VPSLQV
Trigger: AACTTGCAGGGAAGGAACCAAACCAGGGGGCAGCTT...TCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGTGGGAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATTGGGCAGAAACCTTGTaGGTGATGATGTCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: NSHMSSSQISKSLVFKSYWAETL*VMMSRP
Trigger: AGGCCTAGACATCATCACCAACAAGGTTTCTGCCCA...ATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAATGGGCAGAAACCTTGTaGGTGATGATGTCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQWAETL*VMMSRP
Trigger: AGGCCTAGACATCATCACCAACAAGGTTTCTGCCCA...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCATCCTGGGGCTTGGTATaGACAAGAACTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: GADKTCCFYYRERETLKPSWGLV*TRTFQS
Trigger: GCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGGA...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCCCCATCTCCTGGGGCTaGGTATTGACAAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: NNSHMSSSQISKSLVFKSPISWG*VLTRTF
Trigger: GAAAGTTCTTGTCAATACCAAGCCCCAGGAGATGGG...GGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGACTGGCCACTTTGCGTTaGTCATGTGGATGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRLATLR*SCGCSL
Trigger: CAAGCTGCATCCACATGACAAACGCAAAGTGGCCAG...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp AAATTACTTTCCTTCCCTACACTCAACAGCGAAGTCATTCATAGGGGAGCAGGCTGTTTCTTCAAAAACTaGCAAGCTCCTGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: KLLSFPTLNSEVIHRGAGCFFKN*QAPGHF
Trigger: AAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAACA...GCCTGCTCCCCTATGAATGACTTCGCTGTTGAGTGTAGGGAAGGAAAGTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp GGGACCACCACCTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 5 (lower is better)
Translates to: GTTTFFRMLTMEKFTMRDTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...ATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp TTTGGTCTTCAAGTCCTATGTCACAGCTTCCTCAGTCTGATTCCCTCCTTCTCTACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 5 (lower is better)
Translates to: FGLQVLCHSFLSLIPSFSTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...AGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGGACTTGAAGACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGTTTAACCCATCGGTTTaGTTTCCGGGCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: QTHQPHKELTRPAVSIIEFNPSV*FPGISL
Trigger: AAGAGATATGCCCGGAAACAAAACCGATGGGTTAAA...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAGGAGTGGCTGTAGGCTaGTGGCCCTGGATGAAACTT +
Preference number: 5 (lower is better)
Translates to: FPKHSSDYSVCENLLVPPGVAVG*WPWMKL
Trigger: AAGTTTCATCCAGGGCCACAAGCCTACAGCCACTCC...TGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp TCGGTTTTGTTTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTGGTTCAAGTGGGATTaGGATTTTATGTGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: SVLFPGISLSYLFQSLNTWFKWD*DFMCAA
Trigger: GGCAGCGCACATAAAATCCAAATCCCACTTGAACCA...GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAAAACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGAGCTGCATTTCAGCTCTaGATCATTCTGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRAAFQL*IILPWG
Trigger: TCCCCAGGGCAGAATGATCAAGAGCTGAAATGCAGC...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp ATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCCCGCATAGCACTCCTTaGCCCAGACTGGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: IVLAIFRNILLIIASVKIPHSTP*PRLGDK
Trigger: TTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGG...GATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCCTGCTTGCCTTGGGATaGCTATGGCCAGATGGTACA +
Preference number: 5 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFLLALG*LWPDGT
Trigger: TGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAG...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp TATCCAAGCGCTCATCTAGAACTGGTCAGCATGAAGCCAAAGGATGCAAGGGTTAAACTTGCAAGCTCCTaGGTATTGACAAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: YPSAHLELVSMKPKDARVKLASS*VLTRTF
Trigger: GAAAGTTCTTGTCAATACCAAGGAGCTTGCAAGTTT...AACCCTTGCATCCTTTGGCTTCATGCTGACCAGTTCTAGATGAGCGCTTGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000489945.5
CDS TCA 90 bp TCCACTAACTGCTATTACCAAATCTCTCTCATCATCTGGGCAAACTaGAGAACTGACTGCTCTCTAGTTGTAAAGGAATTTGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: STNCYYQISLIIWAN*RTDCSLVVKEFGVS
Trigger: GCTGACCCCAAATTCCTTTACAACTAGAGAGCAGTCAGTTCTTCAGTTTGCCCAGATGATGAGAGAGATTTGGTAATAGCAGTTAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS-3UTR CAA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCTGGGCAGAAACCTTGTaGGTGATGATGTCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFWAETL*VMMSRP
Trigger: AGGCCTAGACATCATCACCAACAAGGTTTCTGCCCA...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp TTGTTTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTGGGCAGAAACCTTGTaGGTGATGATGTCTAGGCCT +
Preference number: 5 (lower is better)
Translates to: LFPGISLSYLFQSLNTFLWAETL*VMMSRP
Trigger: AGGCCTAGACATCATCACCAACAAGGTTTCTGCCCA...AAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CAA 90 bp TTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTTAGAGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: FRAYLLVTCFRASIPFFRADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...TCTAAAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CAA 90 bp AAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAGAGCCTCCTGGGGCTTGGTATaGACAAGAACTTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: KHSSDYSVCENLLVPPRASWGLV*TRTFQS
Trigger: GCTCTGGAAAGTTCTTGTCAATACCAAGCCCCAGGA...GGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR CAA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGACCCATCTCCTGGGGCTaGGTATTGACAAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRPISWG*VLTRTF
Trigger: GAAAGTTCTTGTCAATACCAAGCCCCAGGAGATGGG...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GTCACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATCCCATCTCCTGGGGCTaGGTATTGACAAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: VTQVITSLVLSFIVWHLYPISWG*VLTRTF
Trigger: GAAAGTTCTTGTCAATACCAAGCCCCAGGAGATGGG...ATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp TTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAAGCTCCTGGCCACTTaGCGTTTGTCATGTGGATGC +
Preference number: 5 (lower is better)
Translates to: FPKHSSDYSVCENLLVPPKLLAT*RLSCGC
Trigger: GCATCCACATGACAAACGCAAAGTGGCCAGGAGCTT...TGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469476.2
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCACCTTCTTCCGTATGTaGACGATGGAGAAATTCACT +
Preference number: 5 (lower is better)
Translates to: SLVHLIISMEMALSCHSLTFFRM*TMEKFT
Trigger: AGTGAATTTCTCCATCGTCAACATACGGAAGAAGGT...GAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CTGGATGAAACTTTGCACGATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCATTTAACCCATCGGTTTaGTTTCCGGGCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: LDETLHDFKSRFKNRLFPFNPSV*FPGISL
Trigger: AAGAGATATGCCCGGAAACAAAACCGATGGGTTAAA...TGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp TCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATCTAGAACTCCCAATATGTTTAACCCATCGGTTTaGTTTCCGGGCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: SMEMALSCHSLKSRTPNMFNPSV*FPGISL
Trigger: AAGAGATATGCCCGGAAACAAAACCGATGGGTTAAA...CATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATGCCCTGGATGAAACTTaGCACGATTTCAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ADKTCCFYYRERETLKPHALDET*HDFKSR
Trigger: CCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGC...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGACACATCAGCCACACAAGGAGCTGACAAGACCTGCTGTTTCTATTATAGAGTTCTCTTTAGGTTCTTaGTTATGGTCTGGGGAAACA +
Preference number: 5 (lower is better)
Translates to: QTHQPHKELTRPAVSIIEFSLGS*LWSGET
Trigger: TGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAA...CTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTTGTGTGGCTGATGTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp GGAGCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCAACTGTCTTGCCTGGATaGGTGTTTGTGTACACATGC +
Preference number: 5 (lower is better)
Translates to: GADKTCCFYYRERETLKPTVLPG*VFVYTC
Trigger: GCATGTGTACACAAACACCAATCCAGGCAAGACAGT...TGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp ATAATTGGTTCCTCCCACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCCTGCTTGCCTTGGGATaGCTATGGCCAGATGGTACA +
Preference number: 5 (lower is better)
Translates to: IIGSSHNNRNFVSGKYIFLLALG*LWPDGT
Trigger: TGTACCATCTGGCCATAGCAATCCCAAGGCAAGCAG...GAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGTGGGAGGAACCAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp TTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAAGCTAGCAGGGGCTTaGGAGATGGACCTAGTTGAG +
Preference number: 5 (lower is better)
Translates to: FPKHSSDYSVCENLLVPPKLAGA*EMDLVE
Trigger: CTCAACTAGGTCCATCTCCAAAGCCCCTGCTAGCTT...TGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR CAA 90 bp GATTTCAAGAGCAGGTTCAAGAACAGACTCTTCCCACTTCGAGACATCAGATACCCTTCAATCACTTTCTaGCCTCAATGGATTACACCT +
Preference number: 5 (lower is better)
Translates to: DFKSRFKNRLFPLRDIRYPSITF*PQWITP
Trigger: AGGTGTAATCCATTGAGGCAAGAAAGTGATTGAAGG...GTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAACCTGCTCTTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTCTTGGGCAGAAACCTaGTTGGTGATGATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: SPGYFPKHSSDYSVCENLSWAET*LVMMSR
Trigger: CCTAGACATCATCACCAACAAGGTTTCTGCCCAAGA...GAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCTCTTGGGCAGAAACCTaGTTGGTGATGATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFSWAET*LVMMSR
Trigger: CCTAGACATCATCACCAACAAGGTTTCTGCCCAAGA...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp ACAACAATAGGAATTTTGTCTCGGGCAAATATATCTTCAATCAGAGCAGTTGCTGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: TTIGILSRANISSIRAVAADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...AGCAACTGCTCTGATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486825.6
ENST00000648678.1
CDS-3UTR CAA 90 bp GCTGACAAGACCTGCTGTTTCTATTATAGAGAACGTGAGACTTTAAAACCACATGCCTTTGATACTGTCTaGCCTGGATTGGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: ADKTCCFYYRERETLKPHAFDTV*PGLVFV
Trigger: CACAAACACCAATCCAGGCAAGACAGTATCAAAGGC...ATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp CAGGGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAATGTGGCTTCCCACCTaGTTAGGTCCTAAAGTAGTT +
Preference number: 5 (lower is better)
Translates to: QGHKTSLKGCSQSWYSPQMWLPT*LGPKVV
Trigger: AACTACTTTAGGACCTAACAAGGTGGGAAGCCACAT...TTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp AAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAGAGCCTCAGCAGATAAGCCATaGCTCCTAAAAGCTAGCAGG +
Preference number: 5 (lower is better)
Translates to: KHSSDYSVCENLLVPPRASADKP*LLKASR
Trigger: CCTGCTAGCTTTTAGGAGCAATGGCTTATCTGCTGA...GGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469476.2
CDS-3UTR CAA 90 bp ATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCCAATATAATCACTGCTaGCTGCCCTCCACTGCCCTA +
Preference number: 5 (lower is better)
Translates to: IVLAIFRNILLIIASVKIQYNHC*LPSTAL
Trigger: TAGGGCAGTGGAGGGCAGCAAGCAGTGATTATATTG...GATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp ATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTGGGCAGAAACCTaGTTGGTGATGATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: IVLAIFRNILLIIASVKISWAET*LVMMSR
Trigger: CCTAGACATCATCACCAACAAGGTTTCTGCCCAAGA...GATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000486825.6
ENST00000489945.5
ENST00000492612.6
ENST00000648678.1
CDS-3UTR CAA 90 bp AAACATGCAGCTTCCTTTGTAAGCATTCAGAGTAGCTTTACAAATAACCAGTTAGCAGATTCTCTGCTCTaGGGCAGAAACCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: KHAASFVSIQSSFTNNQLADSLL*GRNLVG
Trigger: ACCAACAAGGTTTCTGCCCAAGAGCAGAGAATCTGC...TAACTGGTTATTTGTAAAGCTACTCTGAATGCTTACAAAGGAAGCTGCATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp AACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATTGTTTCTTCAAAAACTaGCAAGCTCCTGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: NSHMSSSQISKSLVFKSYCFFKN*QAPGHF
Trigger: AAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAACA...ATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTGAAAGAGGGCTTCAATaGGAAGTAATAGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCERGLQ*EVIDLQ
Trigger: TTGGAGATCTATTACTTCCAATTGAAGCCCTCTTTC...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp TTTTGTTTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCATGTGGCTTCCCACCTaGTTAGGTCCTAAAGTAGTT +
Preference number: 5 (lower is better)
Translates to: FCFRAYLLVTCFRASIPFMWLPT*LGPKVV
Trigger: AACTACTTTAGGACCTAACAAGGTGGGAAGCCACAT...GAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp CACACAGGTGATAACTTCTCTTGTTCTCAGCTTCATTGTATGGCATCTTTATTGTGGATTACACCTGCCTaGAAAACCACAACCTTGGAT +
Preference number: 5 (lower is better)
Translates to: HTGDNFSCSQLHCMASLLWITPA*KTTTLD
Trigger: ATCCAAGGTTGTGGTTTTCAAGGCAGGTGTAATCCA...CAATAAAGATGCCATACAATGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp ATCCACAATCTAGTTCTCTTTTTGTGGTGCCAGACCTGTATATTCAACTGTCTATGTTTCTTCAAAAACTaGCAAGCTCCTGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: IHNLVLFLWCQTCIFNCLCFFKN*QAPGHF
Trigger: AAAGTGGCCAGGAGCTTGCAAGTTTTTGAAGAAACA...TAGACAGTTGAATATACAGGTCTGGCACCACAAAAAGAGAACTAGATTGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp TTTGGTTCACTTAATCATCTCAATGGAGATGGCCCTTTCCTGCCATTCACTCAAATATCTCTTAGTTACTaGTTTCAGAGCCTCAATACC +
Preference number: 5 (lower is better)
Translates to: FGSLNHLNGDGPFLPFTQISLSY*FQSLNT
Trigger: GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATAT...TTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATGATTAAGTGAACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316891.10
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CGGTTTTGTTTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTATATCTCTTAGTTACTaGTTTCAGAGCCTCAATACC +
Preference number: 5 (lower is better)
Translates to: RFCFRAYLLVTCFRASIPISLSY*FQSLNT
Trigger: GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATAT...AGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAAAACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp CTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCTATGTCAAATTTCAAAGTCTTaGGTCTTCAAGTCCTATGTC +
Preference number: 5 (lower is better)
Translates to: LTHEQLANFKVFGLQVLCQISKS*VFKSYV
Trigger: GACATAGGACTTGAAGACCAAAGACTTTGAAATTTG...ACATAGGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS-3UTR CAA 90 bp CTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTATGTGCGCTGCCCATAACATTTATCAAGAATaGCTTTTCAAGGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LLFFSWFKWDLDFMCAAHNIYQE*LFKVQQ
Trigger: CTGCTGCACCTTGAAAAGCAATTCTTGATAAATGTT...ATGGGCAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp ATAGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTTTAACCCATCGGTTTaGTTTCCGGGCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: IVLAIFRNILLIIASVKIFNPSV*FPGISL
Trigger: AAGAGATATGCCCGGAAACAAAACCGATGGGTTAAA...GATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTCCTGGCTATTTTCCGAAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTCTCTTTAGGTTCTTaGTTATGGTCTGGGGAAACA +
Preference number: 5 (lower is better)
Translates to: SPGYFPKHSSDYSVCENLFSLGS*LWSGET
Trigger: TGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAA...GAGATTTTCACAGACGCTATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp AGTGATAATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCTGCCTGGATTGGTGTTaGTGTACACATGCAATTATT +
Preference number: 5 (lower is better)
Translates to: SDNNSHMSSSQISKSLVFCLDWC*CTHAII
Trigger: AATAATTGCATGTGTACACAAACACCAATCCAGGCA...GAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp AAACATTCTTCTGATTATAGCGTCTGTGAAAATCTCTTAGTTCCTCCAAGAGCCTGCCTGGATTGGTGTTaGTGTACACATGCAATTATT +
Preference number: 5 (lower is better)
Translates to: KHSSDYSVCENLLVPPRACLDWC*CTHAII
Trigger: AATAATTGCATGTGTACACAAACACCAATCCAGGCA...GGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCTATAATCAGAAGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648678.1
CDS-3UTR CAA 90 bp AATAACTCACACATGAGCAGCTCGCAAATTTCAAAGTCTTTGGTCTTCAAGTCCAACATTTATCAAGAATaGCTTTTCAAGGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: NNSHMSSSQISKSLVFKSNIYQE*LFKVQQ
Trigger: CTGCTGCACCTTGAAAAGCAATTCTTGATAAATGTT...GGACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316891.10
ENST00000648678.1
CDS-3UTR CAA 90 bp CTTCTTCCGTATGTTGACGATGGAGAAATTCACTATGAGAGATTCCTGTTTCTTAAACTTGCAAGCTCCTaGGTATTGACAAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: LLPYVDDGEIHYERFLFLKLASS*VLTRTF
Trigger: GAAAGTTCTTGTCAATACCAAGGAGCTTGCAAGTTT...AAGAAACAGGAATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486825.6
CDS-3UTR CAA 90 bp TTGTTTCCGGGCATATCTCTTAGTTACTTGTTTCAGAGCCTCAATACCTTTCTTATATCTCTTAGTTACTaGTTTCAGAGCCTCAATACC +
Preference number: 5 (lower is better)
Translates to: LFPGISLSYLFQSLNTFLISLSY*FQSLNT
Trigger: GGTATTGAGGCTCTGAAACAAGTAACTAAGAGATAT...AAGAAAGGTATTGAGGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489945.5
ENST00000492612.6
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp TCTGAGTCCAATCTTCTTCTTTTCTTCAGTTGGTTCAAGTGGGATTTGGATTTTTTCTCTTTAGGTTCTTaGTTATGGTCTGGGGAAACA +
Preference number: 5 (lower is better)
Translates to: SESNLLLFFSWFKWDLDFFSLGS*LWSGET
Trigger: TGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAA...AAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000462797.5
ENST00000495175.6
ENST00000648678.1
CDS-3UTR CAA 90 bp GGACATAAAACTTCTTTAAAGGGATGCAGTCAATCCTGGTATTCACCACAAAGACAAATTTCAAAGTCTTaGGTCTTCAAGTCCTATGTC +
Preference number: 5 (lower is better)
Translates to: GHKTSLKGCSQSWYSPQRQISKS*VFKSYV
Trigger: GACATAGGACTTGAAGACCAAAGACTTTGAAATTTG...TCTTTGTGGTGAATACCAGGATTGACTGCATCCCTTTAAAGAAGTTTTATGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000537440.5
ENST00000648678.1
CDS GCA 72 bp GCGCTGACGATCTCACCGCCGAGCCGCTGGCCTAGCTaGAACGCCAGCGTGGATTTGCCGGTGCCCGTGGCC +
Preference number: 6 (lower is better)
Translates to: ALTISPPSRWPS*NASVDLPVPVA
Trigger: GGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
ENST00000541099.5
ENST00000648678.1
CDS GCA 72 bp CAGGCCCCTGAGCCCACTGCCCACGGGAACTGCTCGTaGAGCCGCCACGGACGCCATCTTATGGCAGTCTGC +
Preference number: 6 (lower is better)
Translates to: QAPEPTAHGNCS*SRHGRHLMAVC
Trigger: GCAGACTGCCATAAGATGGCGTCCGTGGCGGCTGCACGAGCAGTTCCCGTGGGCAGTGGGCTCAGGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372818.5
ENST00000495175.6
CDS CCA 72 bp CACCGCCGAGCCGCTGGCCTAGCTGCAACGCCAGCGTaGATTTGCCGGTGCCCGTGGCCCCGAGAATCACTA +
Preference number: 6 (lower is better)
Translates to: HRRAAGLAATPA*ICRCPWPRESL
Trigger: TAGTGATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
ENST00000541099.5
ENST00000648678.1
CDS GCA 72 bp CGAGCCGCTGGCCTAGCTGCAACGCCAGCGTGGATTTaGCGGTGCCCGTGGCCCCGAGAATCACTACAAGAG +
Preference number: 6 (lower is better)
Translates to: RAAGLAATPAWI*RCPWPRESLQE
Trigger: CTCTTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
ENST00000541099.5
ENST00000648678.1
CDS CCA 72 bp ATGGAGTCAGCGCTGACGATCTCACCGCCGAGCCGCTaGCCTAGCTGCAACGCCAGCGTGGATTTGCCGGTG +
Preference number: 6 (lower is better)
Translates to: MESALTISPPSR*PSCNASVDLPV
Trigger: CACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
ENST00000541099.5
ENST00000648678.1
CDS CAA 72 bp CCGAGCCGCTGGCCTAGCTGCAACGCCAGCGTGGATTaGCCGGTGCCCGTGGCCCCGAGAATCACTACAAGA +
Preference number: 6 (lower is better)
Translates to: PSRWPSCNASVD*PVPVAPRITTR
Trigger: TCTTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
ENST00000541099.5
ENST00000648678.1
CDS CAA 90 bp ATCTCACCGCCGAGCCGCTGGCCTAGCTGCAACGCCAGCGTGGATTaGCCGGTGCCCGTGGCCCCGAGAATCACTACAAGAGGTAGGGTC +
Preference number: 6 (lower is better)
Translates to: ISPPSRWPSCNASVD*PVPVAPRITTRGRV
Trigger: GACCCTACCTCTTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
ENST00000541099.5
CDS GCA 72 bp GTGGCCCCGAGAATCACTACAAGAGGTAGGGTCCGTTaGAGGCCCCTGAGCCCACTGCCCACGGGAACTGCT +
Preference number: 6 (lower is better)
Translates to: VAPRITTRGRVR*RPLSPLPTGTA
Trigger: AGCAGTTCCCGTGGGCAGTGGGCTCAGGGGCCTGCAACGGACCCTACCTCTTGTAGTGATTCTCGGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
CDS GCA 72 bp GCTGGCCTAGCTGCAACGCCAGCGTGGATTTGCCGGTaGCCGTGGCCCCGAGAATCACTACAAGAGGTAGGG +
Preference number: 6 (lower is better)
Translates to: AGLAATPAWICR*PWPRESLQEVG
Trigger: CCCTACCTCTTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
ENST00000541099.5
CDS TCA 72 bp TGTCTAGGCCTTCATAGACCTGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCCGCTGGCCTAGCTGCA +
Preference number: 6 (lower is better)
Translates to: CLGLHRPAWSQR*RSHRRAAGLAA
Trigger: TGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGCAGGTCTATGAAGGCCTAGACA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000462797.5
ENST00000489945.5
ENST00000492612.6
ENST00000537440.5
CDS CCA 72 bp CTAGCTGCAACGCCAGCGTGGATTTGCCGGTGCCCGTaGCCCCGAGAATCACTACAAGAGGTAGGGTCCGTT +
Preference number: 6 (lower is better)
Translates to: LAATPAWICRCP*PRESLQEVGSV
Trigger: AACGGACCCTACCTCTTGTAGTGATTCTCGGGGCCACGGGCACCGGCAAATCCACGCTGGCGTTGCAGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000316891.10
ENST00000372818.5
ENST00000441669.6
ENST00000462797.5
ENST00000486825.6
ENST00000489945.5
ENST00000491865.5
ENST00000492612.6
ENST00000495175.6
ENST00000537440.5
ENST00000541099.5
CDS TCA 72 bp TGTTTCAGAGCCTCAATACCTGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCCGCTGGCCTAGCTGCA +
Preference number: 6 (lower is better)
Translates to: CFRASIPAWSQR*RSHRRAAGLAA
Trigger: TGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGCAGGTATTGAGGCTCTGAAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491865.5
CDS TCA 72 bp GTTTCTGAGGAATCCAAAACTGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCCGCTGGCCTAGCTGCA +
Preference number: 6 (lower is better)
Translates to: VSEESKTAWSQR*RSHRRAAGLAA
Trigger: TGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGCAGTTTTGGATTCCTCAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486825.6
CDS TCA 72 bp TTCAAAAACTTGCAAGCTCCTGCATGGAGTCAGCGCTaGCGATCTCACCGCCGAGCCGCTGGCCTAGCTGCA +
Preference number: 6 (lower is better)
Translates to: FKNLQAPAWSQR*RSHRRAAGLAA
Trigger: TGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGCTGACTCCATGCAGGAGCTTGCAAGTTTTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495175.6
CDS CAA 90 bp ATTTGGGGTCAGCGCGCCAGGCTTTCTTACCTGGCCACTTTGCGTTaGTCATGTGGATGCAGCTTGGCAGCCATTTCTGGGTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: IWGQRARLSYLATLR*SCGCSLAAISGSTW
Trigger: CCAGGTGGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGTAAGAAAGCCTGGCGCGCTGACCCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS GCA 72 bp GGGGTCAGCGCGCCAGGCTTTCTTACCTGGCCACTTTaGGTTTGTCATGTGGATGCAGCTTGGCAGCCATTT +
Preference number: 6 (lower is better)
Translates to: GVSAPGFLTWPL*VCHVDAAWQPF
Trigger: AAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGTAAGAAAGCCTGGCGCGCTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS CAA 72 bp TGGGGTCAGCGCGCCAGGCTTTCTTACCTGGCCACTTaGCGTTTGTCATGTGGATGCAGCTTGGCAGCCATT +
Preference number: 6 (lower is better)
Translates to: WGQRARLSYLAT*RLSCGCSLAAI
Trigger: AATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGTAAGAAAGCCTGGCGCGCTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS CCA 72 bp ACCTGGCCACTTTGCGTTTGTCATGTGGATGCAGCTTaGCAGCCATTTCTGGGTCCACCTGGCTTAGGCGTT +
Preference number: 6 (lower is better)
Translates to: TWPLCVCHVDAA*QPFLGPPGLGV
Trigger: AACGCCTAAGCCAGGTGGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS CAA 72 bp TACCTGGCCACTTTGCGTTTGTCATGTGGATGCAGCTaGGCAGCCATTTCTGGGTCCACCTGGCTTAGGCGT +
Preference number: 6 (lower is better)
Translates to: YLATLRLSCGCS*AAISGSTWLRR
Trigger: ACGCCTAAGCCAGGTGGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS CAA 90 bp AAAGGAATTTGGGGTCAGCGCGCCAGGCTTTCTTACCTGGCCACTTaGCGTTTGTCATGTGGATGCAGCTTGGCAGCCATTTCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: KGIWGQRARLSYLAT*RLSCGCSLAAISGS
Trigger: GGACCCAGAAATGGCTGCCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGTAAGAAAGCCTGGCGCGCTGACCCCAAATTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS CCA 72 bp AAGGAATTTGGGGTCAGCGCGCCAGGCTTTCTTACCTaGCCACTTTGCGTTTGTCATGTGGATGCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: KEFGVSAPGFLT*PLCVCHVDAAW
Trigger: CCAAGCTGCATCCACATGACAAACGCAAAGTGGCCAGGTAAGAAAGCCTGGCGCGCTGACCCCAAATTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462243.2
CDS TCA 72 bp ACCCTCTTATCCAAGCGCTCATCTGCCTGGTCAGCATaGAGCCAAAGGATGCAAGGGTTAGAGAACTTCAGA +
Preference number: 6 (lower is better)
Translates to: TLLSKRSSAWSA*SQRMQGLENFR
Trigger: TCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGATGAGCGCTTGGATAAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441669.6
CDS TCA 72 bp CCCCAAAGGGATCAAGAGGCCAACAGGGTCCTGGTCTaGTTCAAGTTTCTGAGGAATCCAAAACTGCATGGA +
Preference number: 6 (lower is better)
Translates to: PQRDQEANRVLV*FKFLRNPKLHG
Trigger: TCCATGCAGTTTTGGATTCCTCAGAAACTTGAATCAGACCAGGACCCTGTTGGCCTCTTGATCCCTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486825.6