Pregenerated sensors for TRIP4 (Homo sapiens)
Ensembl gene IDs: ENSG00000103671Ensembl transcript IDs: ENST00000261884.8, ENST00000557834.5, ENST00000558162.1, ENST00000558442.1, ENST00000558820.5, ENST00000560475.1, ENST00000560567.5, ENST00000560920.6, ENST00000561265.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCAGGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCGTTGCTGTTCTCTTGTaGCTTGGCCAAATCAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PGNHKGDDQGAGLQACPVVAVLL*LGQIKR Trigger: CCTTTTGATTTGGCCAAGGCACAAGAGAACAGCAAC...GACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| 3UTR-3UTR GCA 90 bp | AATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCCTCTCAGGTGTTTTAACCTCTaGAGTCGTGTCAGGTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: NHKGDDQGAGLQACPVPLRCFNL*SRVRFS Trigger: ACTGAACCTGACACGACTGCAGAGGTTAAAACACCT...GAGAGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| 3UTR-3UTR GCA 90 bp | ATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCCTCTCTTTTTTGAAGCACTGCTaGAAAGGATCCGAAATCAAC | + |
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Preference number: 2 (lower is better) Translates to: ITRVTTREQDCKPVLSLSFLKHC*KGSEIN Trigger: GTTGATTTCGGATCCTTTGCAGCAGTGCTTCAAAAA...AGAGAGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGAT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| 3UTR-3UTR CCA 90 bp | AATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCCTCTCTGTTCTCTTGTGCCTTaGCCAAATCAAAAGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: NHKGDDQGAGLQACPVPLCSLVP*PNQKVF Trigger: AAACACCTTTTGATTTGGCCAAGGCACAAGAGAACA...GAGAGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGTGTAGCCTGGAGTTCTaGGACTTCTTGAGGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKCSLEF*DFLRGG Trigger: CCCTCCCCTCAAGAAGTCTCAGAACTCCAGGCTACA...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCGGAGTTGCTGTTCTCTaGTGCCTTGGCCAAATCAAA | + |
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Preference number: 3 (lower is better) Translates to: PGNHKGDDQGAGLQACPVGVAVL*CLGQIK Trigger: TTTGATTTGGCCAAGGCACAAGAGAACAGCAACTCC...GACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| 3UTR-3UTR CAA 90 bp | AATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCCTCTCTTCTTCTTTACGGAGTaGCTGTTCTCTTGTGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: NHKGDDQGAGLQACPVPLFFFTE*LFSCAL Trigger: CAAGGCACAAGAGAACAGCAACTCCGTAAAGAAGAA...GAGAGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| 3UTR-3UTR CAA 90 bp | AATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCCTCTCCTCCTGATCATTCTTTaGCCATTTGGTTATAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: NHKGDDQGAGLQACPVPLLLIIL*PFGYKF Trigger: GAACTTATAACCAAATGGCAAAAGAATGATCAGGAG...GAGAGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| 3UTR-3UTR CAA 90 bp | CCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTCTTCTGTTCTCTTGTGCCTaGGCCAAATCAAAAGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: PHEYTPECHRISKGLSLLLFSCA*AKSKGV Trigger: AACACCTTTTGATTTGGCCAAGGCACAAGAGAACAG...AAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR CCA 90 bp | GGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCCTGTCTTCCGCAACTGCTaGGTGCACCAGTGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: GNHKGDDQGAGLQACPVPVFRNC*VHQCTS Trigger: GCTGGTGCACTGGTGCACCCAGCAGTTGCGGAAGAC...AGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR GCA 90 bp | CCAGGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCAAAGTCTTCCGCAACTaGTGGGTGCACCAGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PGNHKGDDQGAGLQACPVKVFRN*WVHQCT Trigger: GGTGCACTGGTGCACCCAGCAGTTGCGGAAGACTTT...GACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR GCA 90 bp | CCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTCTTTCCGCAACTGCTGGGTaGACCAGTGCACCAGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: PHEYTPECHRISKGLSLLSATAG*TSAPAA Trigger: AGCCGCTGGTGCACTGGTGCACCCAGCAGTTGCGGA...AAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558820.5 ENST00000560920.6 |
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| CDS-3UTR GCA 90 bp | ATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCCTCTCTGAGTACACACCAGAGTaGCACAGAATAAGCAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: ITRVTTREQDCKPVLSLSEYTPE*HRISKG Trigger: GCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTC...AGAGAGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR CCA 90 bp | CCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTCTTGTCTTCCGCAACTGCTaGGTGCACCAGTGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PHEYTPECHRISKGLSLLVFRNC*VHQCTS Trigger: GCTGGTGCACTGGTGCACCCAGCAGTTGCGGAAGAC...AAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558820.5 ENST00000560920.6 |
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| CDS-3UTR TCA 90 bp | CCAGGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCATATCTTGTTCCTCATaGGTACACACCAGAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PGNHKGDDQGAGLQACPVISCSS*VHTRVP Trigger: TGGCACTCTGGTGTGTACTCATGAGGAACAAGATAT...GACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR TCA 90 bp | CCAGGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCTCTCCACTCCTGACATaGGTTTCTTTAGCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGNHKGDDQGAGLQACPVSPLLT*VSLAVS Trigger: AGAAACTGCTAAAGAAACTCATGTCAGGAGTGGAGA...GACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR GCA 90 bp | CCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTCTTAAAGTCTTCCGCAACTaGTGGGTGCACCAGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PHEYTPECHRISKGLSLLKVFRN*WVHQCT Trigger: GGTGCACTGGTGCACCCAGCAGTTGCGGAAGACTTT...AAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558820.5 ENST00000560920.6 |
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| CDS-3UTR CCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGGTCTTCCGCAACTGCTaGGTGCACCAGTGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWVFRNC*VHQCTS Trigger: GCTGGTGCACTGGTGCACCCAGCAGTTGCGGAAGAC...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR GCA 90 bp | GGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCCTTTTTTGAAGCACTGCTaGAAAGGATCCGAAATCAAC | + |
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Preference number: 4 (lower is better) Translates to: GNHKGDDQGAGLQACPVPFLKHC*KGSEIN Trigger: GTTGATTTCGGATCCTTTGCAGCAGTGCTTCAAAAA...AGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR TCA 90 bp | ATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCCTCTCTACTGGCAAAGTAATCTaGCTCATCATCAATGACTTG | + |
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Preference number: 4 (lower is better) Translates to: ITRVTTREQDCKPVLSLSTGKVI*LIINDL Trigger: CAAGTCATTGATGATGAGTCAGATTACTTTGCCAGT...AGAGAGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR TCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGTGTAGCCTGGAGTTCTaGGACTTCTTGAGGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWCSLEF*DFLRGG Trigger: CCCTCCCCTCAAGAAGTCTCAGAACTCCAGGCTACA...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR GCA 90 bp | CTTGTTCCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCGAGTACACACCAGAGTaGCACAGAATAAGCAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LVPHEYTPECHRISKGLSEYTPE*HRISKG Trigger: GCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTC...GCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGGAACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558820.5 ENST00000560920.6 |
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| CDS-3UTR CCA 90 bp | CCAGGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCTCATCATCAATGACTTaGGTCCTTCGAATACTAGTT | + |
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Preference number: 4 (lower is better) Translates to: PGNHKGDDQGAGLQACPVSSSMT*VLRILV Trigger: AACTAGTATTCGAAGGACCCAAGTCATTGATGATGA...GACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR GCA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGTCCGCAACTGCTGGGTaGACCAGTGCACCAGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKSATAG*TSAPAA Trigger: AGCCGCTGGTGCACTGGTGCACCCAGCAGTTGCGGA...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR GCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGTCCTCCTCTCGCTTCTaGAAGGTTTCCCGCTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWSSSRF*KVSRSS Trigger: ACTTGAGCGGGAAACCTTGCAGAAGCGAGAGGAGGA...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR TCA 90 bp | CTTGTTCCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCATATCTTGTTCCTCATaGGTACACACCAGAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LVPHEYTPECHRISKGLSISCSS*VHTRVP Trigger: TGGCACTCTGGTGTGTACTCATGAGGAACAAGATAT...GCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGGAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558820.5 ENST00000560920.6 |
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| CDS-3UTR GCA 90 bp | CCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTCTTGTTGCTGTTCTCTTGTaGCTTGGCCAAATCAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: PHEYTPECHRISKGLSLLVAVLL*LGQIKR Trigger: CCTTTTGATTTGGCCAAGGCACAAGAGAACAGCAAC...AAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR GCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGGAGTACACACCAGAGTaGCACAGAATAAGCAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWEYTPE*HRISKG Trigger: GCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTC...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR GCA 90 bp | CTTGTTCCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCTCTTCTTTACGGAGTTaGTGTTCTCTTGTGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: LVPHEYTPECHRISKGLSSSLRS*CSLVPS Trigger: AGATGGCACAAGAGAACAGCAACTCCGTAAAGAAGA...GCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGGAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560920.6 |
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| CDS-3UTR GCA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAAGTCTTCCGCAACTaGTGGGTGCACCAGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKKVFRN*WVHQCT Trigger: GGTGCACTGGTGCACCCAGCAGTTGCGGAAGACTTT...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR GCA 90 bp | CTTGTTCCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCTTTTTGAAGCACTGCTaGAAAGGATCCGAAATCAAC | + |
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Preference number: 4 (lower is better) Translates to: LVPHEYTPECHRISKGLSFLKHC*KGSEIN Trigger: GTTGATTTCGGATCCTTTGCAGCAGTGCTTCAAAAA...GCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGGAACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000558820.5 ENST00000560920.6 |
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| CDS-3UTR GCA 90 bp | CCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTCTTTGGTCGCCTGATTTCTaGCCATCTAAAATTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: PHEYTPECHRISKGLSLLWSPDF*PSKISS Trigger: AGATGAAATTTTAGATGGGCAGAAATCAGGCGACCA...AAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR GCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGAGGTGTTTTAACCTCTaGAGTCGTGTCAGGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWRCFNL*SRVRFS Trigger: ACTGAACCTGACACGACTGCAGAGGTTAAAACACCT...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR CCA 90 bp | CTTGTTCCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCTTGCCTTCATTTCCCTaGAGGAGATCAGTAACATAT | + |
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Preference number: 4 (lower is better) Translates to: LVPHEYTPECHRISKGLSLPSFP*RRSVTY Trigger: ATATGTTACTGATCTCCTCCAGGGAAATGAAGGCAA...GCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGGAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560920.6 |
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| CDS-3UTR CCA 90 bp | CCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTCTTTGTTCTCTTGTGCCTTaGCCAAATCAAAAGGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PHEYTPECHRISKGLSLLCSLVP*PNQKVF Trigger: AAACACCTTTTGATTTGGCCAAGGCACAAGAGAACA...AAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR TCA 90 bp | CCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTCTTTTCAGCACTCTCAATTaGCAAAACGTACTGAATGAT | + |
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Preference number: 4 (lower is better) Translates to: PHEYTPECHRISKGLSLLFSTLN*QNVLND Trigger: ATCATTCAGTACGTTTTGTCAATTGAGAGTGCTGAA...AAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560920.6 |
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| CDS-3UTR TCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGATTCGCAACTGGTGCTaGAATGAGTTGAACTCTAGT | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWIRNWC*NELNSS Trigger: ACTAGAGTTCAACTCATTTCAGCACCAGTTGCGAAT...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR TCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGGGAAGTGAAAGAAGATaGACGTCAATGACTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWGSERR*TSMTSL Trigger: GAGAGAAGTCATTGACGTTCATCTTCTTTCACTTCC...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR GCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGATTGAAAGGAGAATATaGGGCTGTTACCTTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWIERRI*GCYLSH Trigger: GTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAAT...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR TCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGACTGGCAAAGTAATCTaGCTCATCATCAATGACTTG | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWTGKVI*LIINDL Trigger: CAAGTCATTGATGATGAGTCAGATTACTTTGCCAGT...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR TCA 90 bp | CAGTATGATTATGAAAGCCCTCAAGTGAGACCAGCTCAGGTAAGATCAACCCATAATCAGACTCTTGACTaGTGTCTGGAAACTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QYDYESPQVRPAQVRSTHNQTLD*CLETAP Trigger: AGGAGCAGTTTCCAGACATCAGTCAAGAGTCTGATT...ATGGGTTGATCTTACCTGAGCTGGTCTCACTTGAGGGCTTTCATAATCATACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558162.1 |
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| CDS-3UTR CCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGTGTTCTCTTGTGCCTTaGCCAAATCAAAAGGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWCSLVP*PNQKVF Trigger: AAACACCTTTTGATTTGGCCAAGGCACAAGAGAACA...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR TCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGTTCAGCACTCTCAATTaGCAAAACGTACTGAATGAT | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWFSTLN*QNVLND Trigger: ATCATTCAGTACGTTTTGTCAATTGAGAGTGCTGAA...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR CCA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGTCATCATCAATGACTTaGGTCCTTCGAATACTAGTT | + |
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Preference number: 4 (lower is better) Translates to: KENMRLLPFPRRRRYVAWSSSMT*VLRILV Trigger: AACTAGTATTCGAAGGACCCAAGTCATTGATGATGA...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR TCA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGATATCTTGTTCCTCATaGGTACACACCAGAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKISCSS*VHTRVP Trigger: TGGCACTCTGGTGTGTACTCATGAGGAACAAGATAT...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR GCA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGGTTGCTGTTCTCTTGTaGCTTGGCCAAATCAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKVAVLL*LGQIKR Trigger: CCTTTTGATTTGGCCAAGGCACAAGAGAACAGCAAC...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR TCA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGTCTCCACTCCTGACATaGGTTTCTTTAGCAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKSPLLT*VSLAVS Trigger: AGAAACTGCTAAAGAAACTCATGTCAGGAGTGGAGA...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR TCA 90 bp | GAGAACATTCCTATTTTACGTTTCAGGAAACTCCAGTATGATTATGAAAGCCCTGCCCAGAAGACAACCTaGCGGATAGTCATTAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: ENIPILRFRKLQYDYESPAQKTT*RIVIRK Trigger: TTTCCTAATGACTATCCGTCAGGTTGTCTTCTGGGC...AGGGCTTTCATAATCATACTGGAGTTTCCTGAAACGTAAAATAGGAATGTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558162.1 |
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| CDS-3UTR TCA 90 bp | GTACACAAAACTCCACTATGCTGTATAGTTCCTTTTCTCCTGGGTCAGACAGCTGAGGATTTTTGCAGATaGAAACAAATGGAGAATCAG | + |
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Preference number: 4 (lower is better) Translates to: VHKTPLCCIVPFLLGQTAEDFCR*KQMENQ Trigger: CTGATTCTCCATTTGTTTTCATCTGCAAAAATCCTC...AGCTGTCTGACCCAGGAGAAAAGGAACTATACAGCATAGTGGAGTTTTGTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000560475.1 |
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| CDS-3UTR TCA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGGTCAACCCACTGCTATaGTACTCTGCTAGTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKVNPLL*YSASEF Trigger: AAATTCACTAGCAGAGTATCATAGCAGTGGGTTGAC...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR TCA 90 bp | TTAGTACACAAAACTCCACTATGCTGTATAGTTCCTTTTCTCCTGGGTCAGACAAATCAGACTCTTGACTaGTGTCTGGAAACTGCTATG | + |
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Preference number: 4 (lower is better) Translates to: LVHKTPLCCIVPFLLGQTNQTLD*CLETAM Trigger: CATAGCAGTTTCCAGACATCAGTCAAGAGTCTGATT...TGTCTGACCCAGGAGAAAAGGAACTATACAGCATAGTGGAGTTTTGTGTACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560475.1 |
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| CDS-3UTR GCA 90 bp | TTAGTACACAAAACTCCACTATGCTGTATAGTTCCTTTTCTCCTGGGTCAGACACTGATGTCTGGAAACTaGTATGATACTCTGCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: LVHKTPLCCIVPFLLGQTLMSGN*YDTLLV Trigger: CACTAGCAGAGTATCATAGCAGTTTCCAGACATCAG...TGTCTGACCCAGGAGAAAAGGAACTATACAGCATAGTGGAGTTTTGTGTACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560475.1 |
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| CDS-3UTR TCA 90 bp | TTAGTACACAAAACTCCACTATGCTGTATAGTTCCTTTTCTCCTGGGTCAGACAGTCTGGAAACTGCTATaGTACTCTGCTAGTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: LVHKTPLCCIVPFLLGQTVWKLL*YSASEF Trigger: AAATTCACTAGCAGAGTATCATAGCAGTTTCCAGAC...TGTCTGACCCAGGAGAAAAGGAACTATACAGCATAGTGGAGTTTTGTGTACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560475.1 |
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| CDS-3UTR GCA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGTTTTTGAAGCACTGCTaGAAAGGATCCGAAATCAAC | + |
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Preference number: 4 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKFLKHC*KGSEIN Trigger: GTTGATTTCGGATCCTTTGCAGCAGTGCTTCAAAAA...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR GCA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGTGGTCGCCTGATTTCTaGCCATCTAAAATTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKWSPDF*PSKISS Trigger: AGATGAAATTTTAGATGGGCAGAAATCAGGCGACCA...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR CCA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGTTGCCTTCATTTCCCTaGAGGAGATCAGTAACATAT | + |
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Preference number: 4 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKLPSFP*RRSVTY Trigger: ATATGTTACTGATCTCCTCCAGGGAAATGAAGGCAA...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR GCA 90 bp | GAGAACATTCCTATTTTACGTTTCAGGAAACTCCAGTATGATTATGAAAGCCCTCTGATGTCTGGAAACTaGTCCTTAAATTGCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: ENIPILRFRKLQYDYESPLMSGN*SLNCFW Trigger: CCAGAAGCAATTTAAGGAGCAGTTTCCAGACATCAG...AGGGCTTTCATAATCATACTGGAGTTTCCTGAAACGTAAAATAGGAATGTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558162.1 |
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| CDS-3UTR CCA 90 bp | CAACCCATCAGAATAAAACACTCAATTGTAGGCAGACTAATCTCTGGCTTCAATCTCTTGACTGATGTCTaGAAACTGCTCCTTAAATTG | + |
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Preference number: 4 (lower is better) Translates to: QPIRIKHSIVGRLISGFNLLTDV*KLLLKL Trigger: CAATTTAAGGAGCAGTTTCCAGACATCAGTCAAGAG...ATTGAAGCCAGAGATTAGTCTGCCTACAATTGAGTGTTTTATTCTGATGGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558162.1 |
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| CDS-3UTR TCA 90 bp | GCTCAGGTAAGATCAACCCATCAGAATAAAACACTCAATTGTAGGCAGACTAATGAGGATTTTTGCAGATaGAAACAAATGGAGAATCAG | + |
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Preference number: 4 (lower is better) Translates to: AQVRSTHQNKTLNCRQTNEDFCR*KQMENQ Trigger: CTGATTCTCCATTTGTTTTCATCTGCAAAAATCCTC...ATTAGTCTGCCTACAATTGAGTGTTTTATTCTGATGGGTTGATCTTACCTGAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558162.1 |
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| CDS-3UTR CCA 90 bp | GAGAACATTCCTATTTTACGTTTCAGGAAACTCCAGTATGATTATGAAAGCCCTTCCTTAAATTGCTTCTaGGACAAGCAGTCAATTAGG | + |
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Preference number: 4 (lower is better) Translates to: ENIPILRFRKLQYDYESPSLNCF*DKQSIR Trigger: CCTAATTGACTGCTTGTCCCAGAAGCAATTTAAGGA...AGGGCTTTCATAATCATACTGGAGTTTCCTGAAACGTAAAATAGGAATGTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558162.1 |
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| CDS-3UTR CAA 90 bp | CCAGGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCTGTTCTCTTGTGCCTaGGCCAAATCAAAAGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: PGNHKGDDQGAGLQACPVLFSCA*AKSKGV Trigger: AACACCTTTTGATTTGGCCAAGGCACAAGAGAACAG...GACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR CAA 90 bp | CCAGGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCTCATCATCAATGACTaGGGTCCTTCGAATACTAGT | + |
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Preference number: 5 (lower is better) Translates to: PGNHKGDDQGAGLQACPVLIIND*GPSNTS Trigger: ACTAGTATTCGAAGGACCCAAGTCATTGATGATGAG...GACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR CAA 90 bp | GGCAATCACAAGGGTGACGACCAGGGAGCAGGACTGCAAGCCTGTCCTGTCCCTCTCCTGATCATTCTTTaGCCATTTGGTTATAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: GNHKGDDQGAGLQACPVPLLIIL*PFGYKF Trigger: GAACTTATAACCAAATGGCAAAAGAATGATCAGGAG...AGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR CAA 90 bp | CCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTCTTGGAGTTGCTGTTCTCTaGTGCCTTGGCCAAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: PHEYTPECHRISKGLSLLGVAVL*CLGQIK Trigger: TTTGATTTGGCCAAGGCACAAGAGAACAGCAACTCC...AAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR CAA 90 bp | CTTGTTCCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTGTGCCATCTTTTTaGAAGCACTGCTGCAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: LVPHEYTPECHRISKGLSLVPSF*KHCCKG Trigger: TCCTTTGCAGCAGTGCTTCAAAAAAGATGGCACAAG...GCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGGAACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000560920.6 |
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| CDS-3UTR CAA 90 bp | CTTGTTCCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCTTCTTCTTTACGGAGTaGCTGTTCTCTTGTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: LVPHEYTPECHRISKGLSFFFTE*LFSCAI Trigger: GATGGCACAAGAGAACAGCAACTCCGTAAAGAAGAA...GCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGGAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560920.6 |
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| CDS-3UTR CAA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGCTGTTCTCTTGTGCCTaGGCCAAATCAAAAGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: KENMRLLPFPRRRRYVAWLFSCA*AKSKGV Trigger: AACACCTTTTGATTTGGCCAAGGCACAAGAGAACAG...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR CAA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGTTCTTCTTTACGGAGTaGCTGTTCTCTTGTGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KENMRLLPFPRRRRYVAWFFFTE*LFSCAL Trigger: CAAGGCACAAGAGAACAGCAACTCCGTAAAGAAGAA...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR CAA 90 bp | CTTGTTCCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTAATTCGCAATTCTaGATGAGGAAGAAGGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LVPHEYTPECHRISKGLSLNSQF*MRKKVL Trigger: AAGGACCTTCTTCCTCATCAAGAATTGCGAATTAAG...GCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGGAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558820.5 |
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| CDS-3UTR CAA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGGTTTCCCGCTCAAGTTaGGACAACCATTGGTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: KENMRLLPFPRRRRYVAWVSRSS*DNHWLE Trigger: TTCTAACCAATGGTTGTCCAAACTTGAGCGGGAAAC...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR CAA 90 bp | CCTCATGAGTACACACCAGAGTGCCACAGAATAAGCAAGGGCCTGAGCCTTCTTCTCCTGATCATTCTTTaGCCATTTGGTTATAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: PHEYTPECHRISKGLSLLLLIIL*PFGYKF Trigger: GAACTTATAACCAAATGGCAAAAGAATGATCAGGAG...AAGAAGGCTCAGGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558820.5 ENST00000560920.6 |
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| CDS-3UTR CAA 90 bp | AAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGAAGACGATATGTAGCCTGGCTCATCATCAATGACTaGGGTCCTTCGAATACTAGT | + |
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Preference number: 5 (lower is better) Translates to: KENMRLLPFPRRRRYVAWLIIND*GPSNTS Trigger: ACTAGTATTCGAAGGACCCAAGTCATTGATGATGAG...CCAGGCTACATATCGTCTTCTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR CAA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGGGAGTTGCTGTTCTCTaGTGCCTTGGCCAAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKGVAVL*CLGQIK Trigger: TTTGATTTGGCCAAGGCACAAGAGAACAGCAACTCC...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR CAA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGCTTAATTCGCAATTCTaGATGAGGAAGAAGGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKLNSQF*MRKKVL Trigger: AAGGACCTTCTTCCTCATCAAGAATTGCGAATTAAG...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS-3UTR CAA 90 bp | CTCCATAAAGTAAAATTGAAAGGAGAATATGCGGCTGTTACCTTTCCCACGAAGCTCCTGATCATTCTTTaGCCATTTGGTTATAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LHKVKLKGEYAAVTFPTKLLIIL*PFGYKF Trigger: GAACTTATAACCAAATGGCAAAAGAATGATCAGGAG...CTTCGTGGGAAAGGTAACAGCCGCATATTCTCCTTTCAATTTTACTTTATGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560567.5 |
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| CDS GCA 72 bp | TTTCAGTCCTCCCCGCTTCCCGGTTCGCTCAGGCAGTaGACATCCCAGAGCTCCTTCCCCGCTTGGACCCGA | + |
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Preference number: 6 (lower is better) Translates to: FQSSPLPGSLRQ*TSQSSFPAWTR Trigger: TCGGGTCCAAGCGGGGAAGGAGCTCTGGGATGTGCACTGCCTGAGCGAACCGGGAAGCGGGGAGGACTGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557834.5 ENST00000558442.1 |
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| CDS CCA 72 bp | GAACTCCCAAAGGCTCTTCAGAAGATCTATCCAATTTaGTCAGTGGCTGGTTCAAGGTTCCATTGGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: ELPKALQKIYPI*SVAGSRFHWQW Trigger: CCATTGCCAATGGAACCTTGAACCAGCCACTGACCAAATTGGATAGATCTTCTGAAGAGCCTTTGGGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261884.8 |
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| CDS CAA 72 bp | AGAACTCCCAAAGGCTCTTCAGAAGATCTATCCAATTaGGTCAGTGGCTGGTTCAAGGTTCCATTGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: RTPKGSSEDLSN*VSGWFKVPLAM Trigger: CATTGCCAATGGAACCTTGAACCAGCCACTGACCAAATTGGATAGATCTTCTGAAGAGCCTTTGGGAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000261884.8 |
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| CDS TCA 72 bp | ACAAAACGTACCTCAGGAGGCAAAGATATAAGTTGTTaGAACAAGACTAACTTACACTGTTTCTCAGTAATC | + |
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Preference number: 6 (lower is better) Translates to: TKRTSGGKDISC*NKTNLHCFSVI Trigger: GATTACTGAGAAACAGTGTAAGTTAGTCTTGTTTCAACAACTTATATCTTTGCCTCCTGAGGTACGTTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561265.1 |
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