RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIP12 (Homo sapiens)

Ensembl gene IDs: ENSG00000153827

Ensembl transcript IDs: ENST00000283943.9, ENST00000343290.5, ENST00000389044.8, ENST00000389045.7, ENST00000409677.5, ENST00000418123.1, ENST00000428959.5, ENST00000430954.5, ENST00000435716.5, ENST00000453485.1, ENST00000459841.1, ENST00000461189.1, ENST00000470302.5, ENST00000477441.1, ENST00000479037.5, ENST00000487178.1, ENST00000495322.1, ENST00000675423.1, ENST00000675453.1, ENST00000675903.1

Found 1346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTTGGTGCTCTGTCCCTTGGCCTTCTGTGGTAGGATGTATAGGATaGCCTAGGGAAGTCACTCCACAATACGGAGTGGTCACATTCATT +
Preference number: 1 (lower is better)
Translates to: SWCSVPWPSVVGCIG*PREVTPQYGVVTFI
Trigger: AATGAATGTGACCACTCCGTATTGTGGAGTGACTTCCCTAGGGCATCCTATACATCCTACCACAGAAGGCCAAGGGACAGAGCACCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR TCA 90 bp ACTCCTCTGACAGTTCCCTTCCACTTAATGGGGTCACTGCCCAAGTaGACTCTCAGGAGGGGACATTTCCATATAAGGCCATTTAAGTGT +
Preference number: 1 (lower is better)
Translates to: TPLTVPFHLMGSLPK*TLRRGHFHIRPFKC
Trigger: ACACTTAAATGGCCTTATATGGAAATGTCCCCTCCTGAGAGTTCACTTGGGCAGTGACCCCATTAAGTGGAAGGGAACTGTCAGAGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR TCA 90 bp TGCCCTAGGGAAGTCACTCCACAATACGGAGTGGTCACATTCATTTaGAGGCACCACTCCTTTCCATGTTATGCACCTAACTCAAACCCA +
Preference number: 1 (lower is better)
Translates to: CPREVTPQYGVVTFI*RHHSFPCYAPNSNP
Trigger: TGGGTTTGAGTTAGGTGCATAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGAGTGACTTCCCTAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR GCA 90 bp GAAAAATCTGCGTTTCTTACGATGAGTGGCTGTGTGAAAGGTTTCTaGTGGGTTTGGCTAAGGCATCTAAAACTCCGTGTCTGCTCCCAA +
Preference number: 1 (lower is better)
Translates to: EKSAFLTMSGCVKGF*WVWLRHLKLRVCSQ
Trigger: TTGGGAGCAGACACGGAGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACCTTTCACACAGCCACTCATCGTAAGAAACGCAGATTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR CCA 90 bp GACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTaGATACTGAAGTTGGTGCTCTGTCCCTTGGCCTTCTGTGGTAGG +
Preference number: 1 (lower is better)
Translates to: DSPQCGKSRVVDLIS*ILKLVLCPLAFCGR
Trigger: CCTACCACAGAAGGCCAAGGGACAGAGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR CCA 90 bp AAATCTGCGTTTCTTACGATGAGTGGCTGTGTGAAAGGTTTCTGCTaGGTTTGGCTAAGGCATCTAAAACTCCGTGTCTGCTCCCAATTA +
Preference number: 1 (lower is better)
Translates to: KSAFLTMSGCVKGFC*VWLRHLKLRVCSQL
Trigger: TAATTGGGAGCAGACACGGAGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACCTTTCACACAGCCACTCATCGTAAGAAACGCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR TCA 90 bp GCCAGCCCAAGCTGTAGACTTCTTAACCTTCATAAAAGAAACAAATaGGCTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTG +
Preference number: 1 (lower is better)
Translates to: ASPSCRLLNLHKRNK*AFLVSFQRLLLLEL
Trigger: CAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAGCTCATTTGTTTCTTTTATGAAGGTTAAGAAGTCTACAGCTTGGGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR GCA 90 bp CACTTGATGAAGCTGCTCAGCAACTGTGCTGTTAGTGGTGAAAACTaGAGAAACACAATTCCCTTCTTGGATTTCAGGGAAAAGCCATTC +
Preference number: 1 (lower is better)
Translates to: HLMKLLSNCAVSGEN*RNTIPFLDFREKPF
Trigger: GAATGGCTTTTCCCTGAAATCCAAGAAGGGAATTGTGTTTCTGCAGTTTTCACCACTAACAGCACAGTTGCTGAGCAGCTTCATCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR GCA 90 bp AAAGGTTTCTGCTGGGTTTGGCTAAGGCATCTAAAACTCCGTGTCTaGTCCCAATTAGTCTACCTAGAACTTACAGTTCAGTTTTCTGGG +
Preference number: 1 (lower is better)
Translates to: KGFCWVWLRHLKLRV*SQLVYLELTVQFSG
Trigger: CCCAGAAAACTGAACTGTAAGTTCTAGGTAGACTAATTGGGAGCAGACACGGAGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR CCA 90 bp AGAGACAAGCATGAGAAGAGAAAAATCTGCGTTTCTTACGATGAGTaGCTGTGTGAAAGGTTTCTGCTGGGTTTGGCTAAGGCATCTAAA +
Preference number: 1 (lower is better)
Translates to: RDKHEKRKICVSYDE*LCERFLLGLAKASK
Trigger: TTTAGATGCCTTAGCCAAACCCAGCAGAAACCTTTCACACAGCCACTCATCGTAAGAAACGCAGATTTTTCTCTTCTCATGCTTGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR CCA 90 bp AAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTaGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTT +
Preference number: 1 (lower is better)
Translates to: KEDGKLTTYSRQSSV*KIKSCGSNFLDTEV
Trigger: AACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR TCA 90 bp ATCAGCCATGACCCGAATCATGGAGATATGTGGATTTCCTTGCATTaGAATACATCTATACAATTGAAAGTTATGCATACAGCACAAAAC +
Preference number: 1 (lower is better)
Translates to: ISHDPNHGDMWISLH*NTSIQLKVMHTAQN
Trigger: GTTTTGTGCTGTATGCATAACTTTCAATTGTATAGATGTATTTCAATGCAAGGAAATCCACATATCTCCATGATTCGGGTCATGGCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTGTCAAACAAGCCACTaGGTTTCTTTTGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSCQTSH*VSFGWW
Trigger: CCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGGGTCACTGCCCAAGTaGACTCTCAGGAGGGGACAT +
Preference number: 2 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLGSLPK*TLRRGH
Trigger: ATGTCCCCTCCTGAGAGTTCACTTGGGCAGTGACCC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGACAGGTGCTTTTATCTaGGTCGAGACAAAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSTGAFI*VETKAE
Trigger: TTCAGCCTTTGTCTCGACGCAGATAAAAGCACCTGT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTATACTTTTTCCCTCTaGTGCAATAAGGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSYTFSL*CNKASA
Trigger: GGCAGAGGCCTTATTGCACCAGAGGGAAAAAGTATA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGTGAAAGGTTTCTGCTaGGTTTGGCTAAGGCATCTA +
Preference number: 2 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSVKGFC*VWLRHL
Trigger: TAGATGCCTTAGCCAAACCCAGCAGAAACCTTTCAC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCGTCGAGACAAAGGCTaGACTGTTTTGTCCCAAGTC +
Preference number: 2 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGRRDKG*TVLSQV
Trigger: GACTTGGGACAAAACAGTTCAGCCTTTGTCTCGACG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGCTATGACTAACATCTaGCTGACTCCATCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVAMTNI*LTPSQQ
Trigger: TTGCTGAGATGGAGTCAGTCAGATGTTAGTCATAGC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCTAAAACTCCGTGTCTaGTCCCAATTAGTCTACCTA +
Preference number: 2 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSLKLRV*SQLVYL
Trigger: TAGGTAGACTAATTGGGAGCAGACACGGAGTTTTAG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGTTTCTTACGATGAGTaGCTGTGTGAAAGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSVSYDE*LCERFL
Trigger: CAGAAACCTTTCACACAGCCACTCATCGTAAGAAAC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTGGTGCTCTGTCCCTTaGCCTTCTGTGGTAGGATGT +
Preference number: 2 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVWCSVP*PSVVGC
Trigger: ACATCCTACCACAGAAGGCCAAGGGACAGAGCACCA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAAAATCAGAGGAAAGTaGAAAGCACATAGAGCTAGT +
Preference number: 2 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSKIRGK*KAHRAS
Trigger: ACTAGCTCTATGTGCTTTTCACTTTCCTCTGATTTT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCATTCCAGAGGCTGTTaGTGCTGGAATTGCCATGTA +
Preference number: 2 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVHSRGC*CWNCHV
Trigger: TACATGGCAATTCCAGCAGCAACAGCCTCTGGAATG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGAGCATTGCTTACAGGTaGTTTTATCTGCGTCGAGAC +
Preference number: 2 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGSIAYR*FYLRRD
Trigger: GTCTCGACGCAGATAAAAGCACCTGTAAGCAATGCT...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR TCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATGTCAAACAAGCCACTaGGTTTCTTTTGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLCQTSH*VSFGWW
Trigger: CCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR TCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGTGGTCACATTCATTTaGAGGCACCACTCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLVVTFI*RHHSFP
Trigger: TGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCAC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATCCAGAGGCTGTTGCTaGTGGAATTGCCATGTAAAC +
Preference number: 2 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLSRGCC*WNCHVN
Trigger: GTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTGTGTGAAAGGTTTCTaGTGGGTTTGGCTAAGGCAT +
Preference number: 2 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVCVKGF*WVWLRH
Trigger: ATGCCTTAGCCAAACCCAGCAGAAACCTTTCACACA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGTCCCAAGTCAGCACTaGGAGAAGGGGAAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSVPSQH*EKGKRS
Trigger: GCTCCTCTTCCCCTTCTCCCAGTGCTGACTTGGGAC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGGTTTCTGCTGGGTTTaGCTAAGGCATCTAAAACTC +
Preference number: 2 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLGFCWV*LRHLKL
Trigger: GAGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR CAA 90 bp TGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTaGGTGCTCTGTCCCTTGGCCTTCTGTGGTAGGATGTATAGGATG +
Preference number: 2 (lower is better)
Translates to: CGKSRVVDLISWILK*VLCPLAFCGRMYRM
Trigger: CATCCTATACATCCTACCACAGAAGGCCAAGGGACAGAGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTAGATGCTGGAATCAATaGGGCCAAATTTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGARCWNQ*GQICQG
Trigger: GCCCTGGCAAATTTGGCCTCATTGATTCCAGCATCT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCTAAAACTCCGTGTCTaGTCCCAATTAGTCTACCTA +
Preference number: 2 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVLKLRV*SQLVYL
Trigger: TAGGTAGACTAATTGGGAGCAGACACGGAGTTTTAG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGCAGACTTAGCTAGATaGATACACACAGCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLADLAR*IHTAQN
Trigger: ATTCTGGGCTGTGTGTATCCATCTAGCTAAGTCTGC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAGGGGAAGAGGAGCGTaGAATAAAGAAGACTATGAA +
Preference number: 2 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLRGRGA*NKEDYE
Trigger: TTCATAGTCTTCTTTATTCCACGCTCCTCTTCCCCT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTCCAGAGGCTGTTGCTaGTGGAATTGCCATGTAAAC +
Preference number: 2 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGASRGCC*WNCHVN
Trigger: GTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTATGACTGGACAGCATTaGTTACAGGTGCTTTTATCT +
Preference number: 2 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVMTGQH*LQVLLS
Trigger: AGATAAAAGCACCTGTAAGCAATGCTGTCCAGTCAT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACTAAAACTCCGTGTCTaGTCCCAATTAGTCTACCTA +
Preference number: 2 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLLKLRV*SQLVYL
Trigger: TAGGTAGACTAATTGGGAGCAGACACGGAGTTTTAG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGTAGGATGTATAGGATaGCCTAGGGAAGTCACTCCA +
Preference number: 2 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAVGCIG*PREVTP
Trigger: TGGAGTGACTTCCCTAGGGCATCCTATACATCCTAC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCGTCGAGACAAAGGCTaGACTGTTTTGTCCCAAGTC +
Preference number: 2 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSRRDKG*TVLSQV
Trigger: GACTTGGGACAAAACAGTTCAGCCTTTGTCTCGACG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGCTATGACTAACATCTaGCTGACTCCATCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAAMTNI*LTPSQQ
Trigger: TTGCTGAGATGGAGTCAGTCAGATGTTAGTCATAGC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTCCTTGTGCTTAATTTaGAGGAAGATATCAGAACAG +
Preference number: 2 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVSLCLI*RKISEQ
Trigger: CTGTTCTGATATCTTCCTGCAAATTAAGCACAAGGA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTAGAGGCTGTTGCTGCTaGAATTGCCATGTAAACAGT +
Preference number: 2 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGARGCCC*NCHVNS
Trigger: ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTATACTTTTTCCCTCTaGTGCAATAAGGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAYTFSL*CNKASA
Trigger: GGCAGAGGCCTTATTGCACCAGAGGGAAAAAGTATA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGGTTTCTGCTGGGTTTaGCTAAGGCATCTAAAACTC +
Preference number: 2 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAGFCWV*LRHLKL
Trigger: GAGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCTCCACAATACGGAGTaGTCACATTCATTTGAAGGC +
Preference number: 2 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGALHNTE*SHSFEG
Trigger: GCCTTCAAATGAATGTGACCACTCCGTATTGTGGAG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTAACCTGATGGATTATTaGAGATTTGAGAAATCAGCA +
Preference number: 2 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVNLMDY*RFEKSA
Trigger: TGCTGATTTCTCAAATCTGCAATAATCCATCAGGTT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCAAATTTGCCAGGGCTaGAACATGGATAAAATGTCA +
Preference number: 2 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAQICQG*NMDKMS
Trigger: TGACATTTTATCCATGTTGCAGCCCTGGCAAATTTG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGCAGACTTAGCTAGATaGATACACACAGCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSADLAR*IHTAQN
Trigger: ATTCTGGGCTGTGTGTATCCATCTAGCTAAGTCTGC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR CAA 90 bp ATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTTaGGACCTTAGGAAGGAATCTCCTCCCATTTTCTCTTCACATTTT +
Preference number: 2 (lower is better)
Translates to: MNYGKFLQIYATGLV*DLRKESPPIFSSHF
Trigger: AAAATGTGAAGAGAAAATGGGAGGAGATTCCTTCCTAAGGTCCAAAACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR CAA 90 bp CTTGTGCTTAATTTGCAGGAAGATATCAGAACAGTTGAAAACAAATaGTTTCAGTCTTTAACTTCACTTGATGAAGCTGCTCAGCAACTG +
Preference number: 2 (lower is better)
Translates to: LVLNLQEDIRTVENK*FQSLTSLDEAAQQL
Trigger: CAGTTGCTGAGCAGCTTCATCAAGTGAAGTTAAAGACTGAAACAATTTGTTTTCAACTGTTCTGATATCTTCCTGCAAATTAAGCACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR GCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTATGACTGGACAGCATTaGTTACAGGTGCTTTTATCT +
Preference number: 2 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSMTGQH*LQVLLS
Trigger: AGATAAAAGCACCTGTAAGCAATGCTGTCCAGTCAT...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR GCA 72 bp TCTGTCCCTTGGCCTTCTGTGGTAGGATGTATAGGATaGCCTAGGGAAGTCACTCCACAATACGGAGTGGTC +
Preference number: 3 (lower is better)
Translates to: SVPWPSVVGCIG*PREVTPQYGVV
Trigger: GACCACTCCGTATTGTGGAGTGACTTCCCTAGGGCATCCTATACATCCTACCACAGAAGGCCAAGGGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTTGGTGCTCTGTCCCTaGGCCTTCTGTGGTAGGATG +
Preference number: 3 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVLVLCP*AFCGRM
Trigger: CATCCTACCACAGAAGGCCAAGGGACAGAGCACCAA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTCTTGGATACTGAAGTaGGTGCTCTGTCCCTTGGCC +
Preference number: 3 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSSWILK*VLCPLA
Trigger: GGCCAAGGGACAGAGCACCAACTTCAGTATCCAAGA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGCCACAGGCCTAGTTTaGGACCTTAGGAAGGAATCT +
Preference number: 3 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSATGLV*DLRKES
Trigger: AGATTCCTTCCTAAGGTCCAAAACTAGGCCTGTGGC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTCTTGGATACTGAAGTaGGTGCTCTGTCCCTTGGCC +
Preference number: 3 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVSWILK*VLCPLA
Trigger: GGCCAAGGGACAGAGCACCAACTTCAGTATCCAAGA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTCATTCCAGAGGCTGTaGCTGCTGGAATTGCCATGT +
Preference number: 3 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVSFQRL*LLELPC
Trigger: ACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAGTGGTCACATTCATTaGAAGGCACCACTCCTTTCC +
Preference number: 3 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSSGHIH*KAPLLS
Trigger: GGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR TCA 72 bp GCTTACAGGTGCTTTTATCTGCGTCGAGACAAAGGCTaGACTGTTTTGTCCCAAGTCAGCACTGGGAGAAGG +
Preference number: 3 (lower is better)
Translates to: AYRCFYLRRDKG*TVLSQVSTGRR
Trigger: CCTTCTCCCAGTGCTGACTTGGGACAAAACAGTTCAGCCTTTGTCTCGACGCAGATAAAAGCACCTGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR GCA 72 bp TGGATTTCAGGGAAAAGCCATTCACTTGTCAGTCTCTaGAGAGACAGGGAGAGAATTCTCTGCCCCCAACTC +
Preference number: 3 (lower is better)
Translates to: WISGKSHSLVSL*RDRERILCPQL
Trigger: GAGTTGGGGGCAGAGAATTCTCTCCCTGTCTCTGCAGAGACTGACAAGTGAATGGCTTTTCCCTGAAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGGAAAAGCCATTCACTaGTCAGTCTCTGCAGAGACA +
Preference number: 3 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVGKAIH*SVSAET
Trigger: TGTCTCTGCAGAGACTGACAAGTGAATGGCTTTTCC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAGGTTTCTGCTGGGTTaGGCTAAGGCATCTAAAACT +
Preference number: 3 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSRFLLG*AKASKT
Trigger: AGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACCT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR GCA 72 bp GCGTTTCTTACGATGAGTGGCTGTGTGAAAGGTTTCTaGTGGGTTTGGCTAAGGCATCTAAAACTCCGTGTC +
Preference number: 3 (lower is better)
Translates to: AFLTMSGCVKGF*WVWLRHLKLRV
Trigger: GACACGGAGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACCTTTCACACAGCCACTCATCGTAAGAAACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGCACAGCCACATTTATaGTTCCAGCCTGGAAAAACA +
Preference number: 3 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVAQPHL*FQPGKT
Trigger: TGTTTTTCCAGGCTGGAACAATAAATGTGGCTGTGC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGTACAAGAGTTGTCTTaGGAGGAAAGAAAACTGCAG +
Preference number: 3 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVVQELS*EERKLQ
Trigger: CTGCAGTTTTCTTTCCTCCAAAGACAACTCTTGTAC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGAATGACTGGACAGCATaGCTTACAGGTGCTTTTATC +
Preference number: 3 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVNDWTA*LTGAFI
Trigger: GATAAAAGCACCTGTAAGCAATGCTGTCCAGTCATT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATCTTGGATACTGAAGTaGGTGCTCTGTCCCTTGGCC +
Preference number: 3 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLSWILK*VLCPLA
Trigger: GGCCAAGGGACAGAGCACCAACTTCAGTATCCAAGA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGTGGATCTAATTTCTaGGATACTGAAGTTGGTGCT +
Preference number: 3 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVCGSNF*DTEVGA
Trigger: AGCACCAACTTCAGTATCCAAGAAATTAGATCCACA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR TCA 72 bp GAAGTCACTCCACAATACGGAGTGGTCACATTCATTTaGAGGCACCACTCCTTTCCATGTTATGCACCTAAC +
Preference number: 3 (lower is better)
Translates to: EVTPQYGVVTFI*RHHSFPCYAPN
Trigger: GTTAGGTGCATAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGAGTGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR GCA 72 bp AATGACTGGACAGCATTGCTTACAGGTGCTTTTATCTaGGTCGAGACAAAGGCTGAACTGTTTTGTCCCAAG +
Preference number: 3 (lower is better)
Translates to: NDWTALLTGAFI*VETKAELFCPK
Trigger: CTTGGGACAAAACAGTTCAGCCTTTGTCTCGACGCAGATAAAAGCACCTGTAAGCAATGCTGTCCAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR GCA 72 bp TGCTGGGTTTGGCTAAGGCATCTAAAACTCCGTGTCTaGTCCCAATTAGTCTACCTAGAACTTACAGTTCAG +
Preference number: 3 (lower is better)
Translates to: CWVWLRHLKLRV*SQLVYLELTVQ
Trigger: CTGAACTGTAAGTTCTAGGTAGACTAATTGGGAGCAGACACGGAGTTTTAGATGCCTTAGCCAAACCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGTACAAGAGTTGTCTTaGGAGGAAAGAAAACTGCAG +
Preference number: 3 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGVQELS*EERKLQ
Trigger: CTGCAGTTTTCTTTCCTCCAAAGACAACTCTTGTAC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR CCA 72 bp CATGAGAAGAGAAAAATCTGCGTTTCTTACGATGAGTaGCTGTGTGAAAGGTTTCTGCTGGGTTTGGCTAAG +
Preference number: 3 (lower is better)
Translates to: HEKRKICVSYDE*LCERFLLGLAK
Trigger: CTTAGCCAAACCCAGCAGAAACCTTTCACACAGCCACTCATCGTAAGAAACGCAGATTTTTCTCTTCTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAACAAATGAGCTTTCCTaGTCTCATTCCAGAGGCTGT +
Preference number: 3 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLTNELS*SHSRGC
Trigger: ACAGCCTCTGGAATGAGACAAGGAAAGCTCATTTGT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAAATGACTGGACAGCATaGCTTACAGGTGCTTTTATC +
Preference number: 3 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLNDWTA*LTGAFI
Trigger: GATAAAAGCACCTGTAAGCAATGCTGTCCAGTCATT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTAGTGGTCACATTCATTaGAAGGCACCACTCCTTTCC +
Preference number: 3 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGASGHIH*KAPLLS
Trigger: GGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR CCA 72 bp GGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTaGAAAATCAAGAGTTGTGGATCTAATTTCTTGGAT +
Preference number: 3 (lower is better)
Translates to: GKLTTYSRQSSV*KIKSCGSNFLD
Trigger: ATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTCATTCCAGAGGCTGTaGCTGCTGGAATTGCCATGT +
Preference number: 3 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSSFQRL*LLELPC
Trigger: ACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTATCCTTGTGCTTAATTaGCAGGAAGATATCAGAACA +
Preference number: 3 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVILVLN*QEDIRT
Trigger: TGTTCTGATATCTTCCTGCAAATTAAGCACAAGGAT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR TCA 72 bp AGCTGTAGACTTCTTAACCTTCATAAAAGAAACAAATaGGCTTTCCTTGTCTCATTCCAGAGGCTGTTGCTG +
Preference number: 3 (lower is better)
Translates to: SCRLLNLHKRNK*AFLVSFQRLLL
Trigger: CAGCAACAGCCTCTGGAATGAGACAAGGAAAGCTCATTTGTTTCTTTTATGAAGGTTAAGAAGTCTACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR GCA 72 bp GTCACTAGGTTATCCTTTACCGTGTATGTCAACTACTaGAATGTCAAACCTAAGACTTATACAAAAGCATTT +
Preference number: 3 (lower is better)
Translates to: VTRLSFTVYVNY*NVKPKTYTKAF
Trigger: AAATGCTTTTGTATAAGTCTTAGGTTTGACATTGCAGTAGTTGACATACACGGTAAAGGATAACCTAGTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR TCA 72 bp GACCCGAATCATGGAGATATGTGGATTTCCTTGCATTaGAATACATCTATACAATTGAAAGTTATGCATACA +
Preference number: 3 (lower is better)
Translates to: DPNHGDMWISLH*NTSIQLKVMHT
Trigger: TGTATGCATAACTTTCAATTGTATAGATGTATTTCAATGCAAGGAAATCCACATATCTCCATGATTCGGGTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR GCA 72 bp CAGGAACAAAATGCTATGTTCACACAAAAATCCTTGTaGTTAATTTGCAGGAAGATATCAGAACAGTTGAAA +
Preference number: 3 (lower is better)
Translates to: QEQNAMFTQKSL*LICRKISEQLK
Trigger: TTTCAACTGTTCTGATATCTTCCTGCAAATTAAGCACAAGGATTTTTGTGTGAACATAGCATTTTGTTCCTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTTCTGGGGCTGGGACTaGACGCTGAACGGGAACGCC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSFWGWD*TLNGNA
Trigger: GGCGTTCCCGTTCAGCGTCCAGTCCCAGCCCCAGAA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGAGCTGCCGAGGTCCTaGATCACAGACTCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSELPRS*ITDSAC
Trigger: ACAGGCGGAGTCTGTGATGCAGGACCTCGGCAGCTC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCACTCTGGCACCTGGTaGTACAGTGGAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSHSGTW*YSGGGR
Trigger: TCGGCCTCCTCCACTGTACCACCAGGTGCCAGAGTG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTTCTGGGGCTGGGACTaGACGCTGAACGGGAACGCC +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVFWGWD*TLNGNA
Trigger: GGCGTTCCCGTTCAGCGTCCAGTCCCAGCCCCAGAA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCAGCTGCAGCATGAGTaGCAGCTGTGGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSQLQHE*QLWLSH
Trigger: GTGGGACAGCCACAGCTGCCACTCATGCTGCAGCTG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGGGTCACTGCCCAAGTaGACTCTCAGGAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSGSLPK*TLRRGH
Trigger: ATGTCCCCTCCTGAGAGTTCACTTGGGCAGTGACCC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGCCCCAGAGGTGGTCATaGCAACAGCCCCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVPQRWS*QQPLQQ
Trigger: CTGTTGCAGGGGCTGTTGGCATGACCACCTCTGGGG...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCCGGTCCGGACTCGGTaGCGCGGCAGTAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGPVRTR*RGSNFH
Trigger: GTGGAAGTTACTGCCGCGCCACCGAGTCCGGACCGG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGCTCCGCCTCAAACTaGGGAGCTCAGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVCSASN*GAQQVE
Trigger: CTCCACCTGCTGAGCTCCCCAGTTTGAGGCGGAGCA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGGGTCACTGCCCAAGTaGACTCTCAGGAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVGSLPK*TLRRGH
Trigger: ATGTCCCCTCCTGAGAGTTCACTTGGGCAGTGACCC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTCATCCTCACCGACCTaGTGGGCTGCCTCAATGATC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSSSSPT*WAASMI
Trigger: GATCATTGAGGCAGCCCATCAGGTCGGTGAGGATGA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675903.1
CDS-3UTR GCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTCGACGAGCTTCAGCTaGTCCTCTTTTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVSTSFS*SSFAQA
Trigger: GGCCTGGGCAAAAGAGGAGCAGCTGAAGCTCGTCGA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCCGGTCCGGACTCGGTaGCGCGGCAGTAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGPVRTR*RGSNFH
Trigger: GTGGAAGTTACTGCCGCGCCACCGAGTCCGGACCGG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCCGGTCCGGACTCGGTaGCGCGGCAGTAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVPVRTR*RGSNFH
Trigger: GTGGAAGTTACTGCCGCGCCACCGAGTCCGGACCGG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAGGCCGGTTGGACATTaGCACCTCTCTCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSRPVGH*HLSLEG
Trigger: CCCTTCAAGAGAGAGGTGCCAATGTCCAACCGGCCT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTACTTCTTCTGGGGCTaGGACTGGACGCTGAACGGG +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVYFFWG*DWTLNG
Trigger: CCCGTTCAGCGTCCAGTCCCAGCCCCAGAAGAAGTA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGGGGAGCTCAGCAGGTaGAGACTCACTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSGELSR*RLTAFL
Trigger: AAGAAACGCAGTGAGTCTCCACCTGCTGAGCTCCCC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGCTTCTTCCTCCTATTaGGTCGTCTTGTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSASSSY*VVLWLG
Trigger: GCCCAACCACAAGACGACTCAATAGGAGGAAGAAGC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283943.9
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTGTCCCACTGCTGACTaGAGTTGTGGATCCCATGGA +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSCPTAD*SCGSHG
Trigger: TCCATGGGATCCACAACTTCAGTCAGCAGTGGGACA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGATGGGCTGCCTCAATaGTCCGGCTGTCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVDGLPQ*SGCQSC
Trigger: ACAGGATTGACAGCCGGATCATTGAGGCAGCCCATC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675903.1
CDS-3UTR GCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGCATGCCAACAGCCCCTaGAACAGAACTAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVHANSP*NRTRGC
Trigger: GCAGCCTCTAGTTCTGTTGCAGGGGCTGTTGGCATG...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGAGTCGTCTTGTGGTTaGGCCCCGGCAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGESSCG*APAVFL
Trigger: GAGGAACACTGCCGGGGCCCAACCACAAGACGACTC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCCCTGCTACTTCTTCTaGGGCTGGGACTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGPCYFF*GWDWTL
Trigger: CAGCGTCCAGTCCCAGCCCCAGAAGAAGTAGCAGGG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTCACTCTCCCCAGAGGTaGTCATGCCAACAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSHSPQR*SCQQPL
Trigger: CAGGGGCTGTTGGCATGACCACCTCTGGGGAGAGTG...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTCCCGCAGTCCGTGCTaGCTCAATGTTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSSRSPC*LNVVAV
Trigger: AACAGCAACAACATTGAGCCAGCACGGACTGCGGGA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGTCCCACTGCTGACTaGAGTTGTGGATCCCATGGA +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVCPTAD*SCGSHG
Trigger: TCCATGGGATCCACAACTTCAGTCAGCAGTGGGACA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGTGCTGCAAGCTGGGTaGTCCCAAGTCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGVLQAG*SQVSCS
Trigger: GCTGCAGCTGACTTGGGATCACCCAGCTTGCAGCAC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGCTGCAAGCTGGGTaGTCCCAAGTCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVVLQAG*SQVSCS
Trigger: GCTGCAGCTGACTTGGGATCACCCAGCTTGCAGCAC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGCCTGTGATCCTCTGTTaGGAGAAAAGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVPVILC*EKSCLL
Trigger: CAGGAGGCAGCTTTTCTCTCAACAGAGGATCACAGG...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAAGGCAGTCAAGGCCTaGTCTGCCACATCAATACAC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSKAVKA*SATSIH
Trigger: GTGTATTGATGTGGCAGAGCAGGCCTTGACTGCCTT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGAGCTGCCGAGGTCCTaGATCACAGACTCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVELPRS*ITDSAC
Trigger: ACAGGCGGAGTCTGTGATGCAGGACCTCGGCAGCTC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAACATGGCCCGTGAGCTaGCGAGGTCCTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLTWPVS*RGPASQ
Trigger: CTGTGATGCAGGACCTCGGCAGCTCACGGGCCATGT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTCCGTGAACCGCCAGTaGCCCCACTCTTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGSVNRQ*PHSSWY
Trigger: ATACCAGGAAGAGTGGGGCCACTGGCGGTTCACGGA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTTCCGTGAACCGCCAGTaGCCCCACTCTTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSSVNRQ*PHSSWY
Trigger: ATACCAGGAAGAGTGGGGCCACTGGCGGTTCACGGA...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACACCTGGTGGTACAGTaGAGGAGGCCGAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLHLVVQ*RRPRLQ
Trigger: CTGTAGCCTCGGCCTCCTCCACTGTACCACCAGGTG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCACCTGGTGGTACAGTaGAGGAGGCCGAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGHLVVQ*RRPRLQ
Trigger: CTGTAGCCTCGGCCTCCTCCACTGTACCACCAGGTG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCACTCTGGCACCTGGTaGTACAGTGGAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGHSGTW*YSGGGR
Trigger: TCGGCCTCCTCCACTGTACCACCAGGTGCCAGAGTG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGAGCCCGTGGTCTTTTaGCGTGTGCTCCGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGEPVVF*RVLRLK
Trigger: TTTGAGGCGGAGCACACGCCAAAAGACCACGGGCTC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGAATTTACTGCCTCCTaGTTGCTTTCAGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSEFTAS*LLSGSA
Trigger: GGCAGACCCTGAAAGCAACCAGGAGGCAGTAAATTC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCACTCTCCCCAGAGGTaGTCATGCCAACAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGHSPQR*SCQQPL
Trigger: CAGGGGCTGTTGGCATGACCACCTCTGGGGAGAGTG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCACCCGCCTGTAGAATaGCTTTACTATGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSHPPVE*LYYVSV
Trigger: CACGGAGACATAGTAAAGCCATTCTACAGGCGGGTG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCAGCTGCAGCATGAGTaGCAGCTGTGGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVQLQHE*QLWLSH
Trigger: GTGGGACAGCCACAGCTGCCACTCATGCTGCAGCTG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGTACTTTGGCCTTCTTaGCCCTCGTTTTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVVLWPS*PSFWQS
Trigger: CGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTAC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACCTTTGAGGCAGCCCTaGCAAGGCCACTACCTCCCG +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLPLRQP*QGHYLP
Trigger: CGGGAGGTAGTGGCCTTGCCAGGGCTGCCTCAAAGG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAGGGGAAGTTTTCGTTaGAGCTGTTTGGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSRGSFR*SCLGSS
Trigger: GGAAGAGCCCAAACAGCTCCAACGAAAACTTCCCCT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGACTGGATTTCTAACATaGCCCGTGAGCTGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVTGFLT*PVSCRG
Trigger: ACCTCGGCAGCTCACGGGCCATGTTAGAAATCCAGT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGTCCCAAGTCAGCACTaGGAGAAGGGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGVPSQH*EKGKRS
Trigger: GCTCCTCTTCCCCTTCTCCCAGTGCTGACTTGGGAC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGCCACTCTTCCTGGTATaGGCCTTGCTTGTTGATGGT +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVPLFLV*ALLVDG
Trigger: ACCATCAACAAGCAAGGCTCATACCAGGAAGAGTGG...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGCTGGGACTGGACGCTaGACGGGAACGCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAAGTGR*TGTPGL
Trigger: AAGGCCAGGCGTTCCCGTTCAGCGTCCAGTCCCAGC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGCTGGGACTGGACGCTaGACGGGAACGCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRAGTGR*TGTPGL
Trigger: AAGGCCAGGCGTTCCCGTTCAGCGTCCAGTCCCAGC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCATCCACCTGGAGGTTaGGTTGTTCGGTTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGHPPGG*VVRLQH
Trigger: GTGCTGCAACCGAACAACTCAACCTCCAGGTGGATG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTCCAGAGGGTCAATCTTaGCAGGTCCACCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSPEGQS*QVHPST
Trigger: AGTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGG...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAGGCCCTGGAGGTTTTaGATATACTTGGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSRPWRF*IYLVPS
Trigger: AGAAGGGACCAAGTATATTCAAAACCTCCAGGGCCT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTCATCCTCACCGACCTaGTGGGCTGCTACCTCAATG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGSSSPT*WAATSM
Trigger: CATTGAGGTAGCAGCCCATCAGGTCGGTGAGGATGA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675453.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTATCGACGAGCTTCAGCTaGTCCTCTTTTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLSTSFS*SSFAQA
Trigger: GGCCTGGGCAAAAGAGGAGCAGCTGAAGCTCGTCGA...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTCTCTGAATGGCACGTaGTGTTCCCGTGTCCTCATT +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVSLNGT*CSRVLI
Trigger: AATGAGGACACGGGAACAGCACGTGCCATTCAGAGA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCCACTGCTTCACATTTaGACAGTCTGGATGCCTTTG +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSPLLHI*TVWMPL
Trigger: CAAAGGCATCCAGACTGTGCAAATGTGAAGCAGTGG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTGCATCCCAAGTGTCTaGTTTACTGCCACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSCIPSV*FTATKE
Trigger: CTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCATTCCAGAGGCTGTTaGTGCTGGAATTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSHSRGC*CWNCHV
Trigger: TACATGGCAATTCCAGCAGCAACAGCCTCTGGAATG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACCCCAGAGGTGGTCATaGCAACAGCCCCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLPQRWS*QQPLQQ
Trigger: CTGTTGCAGGGGCTGTTGGCATGACCACCTCTGGGG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTACCGACCTGATGGGCTaGCTCAATGATCCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGTDLMG*LNDPAV
Trigger: GACAGCCGGATCATTGAGGCAGCCCATCAGGTCGGT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675423.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACACCTGGTGGTACAGTaGAGGAGGCCGAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLHLVVQ*RRPRLQ
Trigger: CTGTAGCCTCGGCCTCCTCCACTGTACCACCAGGTG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGAGCCCGTGGTCTTTTaGCGTGTGCTCCGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGEPVVF*RVLRLK
Trigger: TTTGAGGCGGAGCACACGCCAAAAGACCACGGGCTC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGCCTGACAACTTCCATTaGAGGCACCACACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVPDNFH*RHHTGE
Trigger: TTCTCCTGTGTGGTGCCTCCAATGGAAGTTGTCAGG...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTGCTGTGCTGCAAGCTaGGTGATCCCAAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGCCAAS*VIPSQL
Trigger: CAGCTGACTTGGGATCACCCAGCTTGCAGCACAGCA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGTCCCAAGTCAGCACTaGGAGAAGGGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLVPSQH*EKGKRS
Trigger: GCTCCTCTTCCCCTTCTCCCAGTGCTGACTTGGGAC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTCCCAAGTCAGCACTaGGAGAAGGGGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVVPSQH*EKGKRS
Trigger: GCTCCTCTTCCCCTTCTCCCAGTGCTGACTTGGGAC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATCTTTTCTGACTCCGTaGACCGCCAGTGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLSFLTP*TASGPT
Trigger: AGTGGGGCCACTGGCGGTTCACGGAGTCAGAAAAGA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCTCTTCTGCACCAGTTaGTTCAGACCCGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVLFCTS*FRPGAT
Trigger: AGTGGCTCCGGGTCTGAATCAACTGGTGCAGAAGAG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTCTTCTGCACCAGTTaGTTCAGACCCGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLFCTS*FRPGAT
Trigger: AGTGGCTCCGGGTCTGAATCAACTGGTGCAGAAGAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTCTCCTCATTTCCCATaGCCAGTAACTGACACATCT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSSPHFP*PVTDTS
Trigger: AGATGTGTCAGTTACTGGTCATGGGAAATGAGGAGA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAGATCAATCTGTTCCTaGCAACTTCCATTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSRSICS*QLPLEA
Trigger: TGCCTCCAATGGAAGTTGTCAGGAACAGATTGATCT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTGGCTGTCCCACTGCTaGCTGAAGTTGTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGWLSHC*LKLWIP
Trigger: TGGGATCCACAACTTCAGTCAGCAGTGGGACAGCCA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGCTATGACTAACATCTaGCTGACTCCATCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSAMTNI*LTPSQQ
Trigger: TTGCTGAGATGGAGTCAGTCAGATGTTAGTCATAGC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGGGCTGCTACCTCAATaGTCCGGCTGTCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVGLLPQ*SGCQSC
Trigger: ACAGGATTGACAGCCGGATCATTGAGGTAGCAGCCC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675453.1
CDS-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCAGCTGCTCCTCTTTTaGCCAGGCCAGAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAQLLLF*PGQSLA
Trigger: GGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCAGCTGCTCCTCTTTTaGCCAGGCCAGAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMQLLLF*PGQSLA
Trigger: GGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCCCCAGAGGTGGTCATaGCAACAGCCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRPQRWS*QQPLQL
Trigger: GAGCTGCAGGGGCTGTTGGCATGACCACCTCTGGGG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000283943.9
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAATCCTTGTAGTAGCTaGTGGGCCTTAGAACTAGCT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSNPCSS*WALELA
Trigger: AGCTAGTTCTAAGGCCCAGCAGCTACTACAAGGATT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTCATCCCTGCTGTGCTaGAAGCTGGGTGATCCCAAG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSSLLC*KLGDPK
Trigger: CTTGGGATCACCCAGCTTGCAGCACAGCAGGGATGA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTCATCCCTGCTGTGCTaGAAGCTGGGTGATCCCAAG +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVSSLLC*KLGDPK
Trigger: CTTGGGATCACCCAGCTTGCAGCACAGCAGGGATGA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTACCTCCCGCAGTCCGTaGTGGCTCAATGTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGTSRSP*WLNVVA
Trigger: AGCAACAACATTGAGCCAGCACGGACTGCGGGAGGT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCTGAAGGACATTCAATaGAGGGTTGCTTCCATCCAT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSLKDIQ*RVASIH
Trigger: ATGGATGGAAGCAACCCTGCATTGAATGTCCTTCAG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCTCTGCCTAGAGGATTaGTCTCATCATCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSLCLED*SHHLWI
Trigger: AATCCACAGATGATGAGAGCAATCCTCTAGGCAGAG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGCATCCCAAGTGTCTaGTTTACTGCCACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVCIPSV*FTATKE
Trigger: CTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGCATTCCAGAGGCTGTTaGTGCTGGAATTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVHSRGC*CWNCHV
Trigger: TACATGGCAATTCCAGCAGCAACAGCCTCTGGAATG...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTCACTTGTCAGTCTCTaGAGAGACAGGGAGAGAATT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSSLVSL*RDRERI
Trigger: AATTCTCTCCCTGTCTCTGCAGAGACTGACAAGTGA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGTAGGATGTATAGGATaGCCTAGGGAAGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVVGCIG*PREVTP
Trigger: TGGAGTGACTTCCCTAGGGCATCCTATACATCCTAC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGAACAGAACTAGAGGCTaGAGCTCCTTGGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGNRTRG*SSLGSF
Trigger: GAAGCTCCCCAAGGAGCTGCAGCCTCTAGTTCTGTT...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGAGTATTGGCTCTGTCTaGATCCTCTGGTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVSIGSV*ILWLWN
Trigger: GTTCCACAACCAGAGGATCCAGACAGAGCCAATACT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGGTCCTGTTGTAGTCTaGACTAGCACTGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGGPVVV*TSTALH
Trigger: GTGAAGCGCAGTGCTAGTCCAGACTACAACAGGACC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTTCTGGGGCTGGGACTaGACGCTGAACGGGAACGCC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRFWGWD*TLNGNA
Trigger: GGCGTTCCCGTTCAGCGTCCAGTCCCAGCCCCAGAA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATACTTCTTCTGGGGCTaGGACTGGACGCTGAACGGG +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLYFFWG*DWTLNG
Trigger: CCCGTTCAGCGTCCAGTCCCAGCCCCAGAAGAAGTA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGGGGAGCTCAGCAGGTaGAGACTCACTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLGELSR*RLTAFL
Trigger: AAGAAACGCAGTGAGTCTCCACCTGCTGAGCTCCCC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAAATTCTCCTCATGCTaGAAGTTGTCCACTAGGCGT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSKFSSC*KLSTRR
Trigger: ACGCCTAGTGGACAACTTCCAGCATGAGGAGAATTT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCTCTTGAGGGCTTCGTaGAACAAGATCAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSLLRAS*NKINLF
Trigger: GAACAGATTGATCTTGTTCCACGAAGCCCTCAAGAG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTGCTGTGCTGCAAGCTaGGTGATCCCAAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGCCAAS*VIPSQL
Trigger: CAGCTGACTTGGGATCACCCAGCTTGCAGCACAGCA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTCCCGCAGTCCGTGCTaGCTCAATGTTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGSRSPC*LNVVAV
Trigger: AACAGCAACAACATTGAGCCAGCACGGACTGCGGGA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGACTGGATTTCTAACATaGCCCGTGAGCTGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGTGFLT*PVSCRG
Trigger: ACCTCGGCAGCTCACGGGCCATGTTAGAAATCCAGT...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTATGATCAGGAAAGATaGAACGACTGCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSYDQER*NDCCPS
Trigger: AGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCATA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAGAGGCTGTTGCTGCTaGAATTGCCATGTAAACAGT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSRGCCC*NCHVNS
Trigger: ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGCCAGGGCTGCAACATaGATAAAATGTCAAGTACAG +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSARAAT*IKCQVQ
Trigger: CTGTACTTGACATTTTATCCATGTTGCAGCCCTGGC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCTCCACAATACGGAGTaGTCACATTCATTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSLHNTE*SHSFEG
Trigger: GCCTTCAAATGAATGTGACCACTCCGTATTGTGGAG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTGGTGCTCTGTCCCTTaGCCTTCTGTGGTAGGATGT +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGWCSVP*PSVVGC
Trigger: ACATCCTACCACAGAAGGCCAAGGGACAGAGCACCA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAAACTCGTCCCAGAGTaGACAAGCTTATCTCATCCT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSKLVPE*TSLSHP
Trigger: AGGATGAGATAAGCTTGTCCACTCTGGGACGAGTTT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCCACTCTTCCTGGTATaGGCCTTGCTTGTTGATGGT +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGPLFLV*ALLVDG
Trigger: ACCATCAACAAGCAAGGCTCATACCAGGAAGAGTGG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGCTGGGACTGGACGCTaGACGGGAACGCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYAGTGR*TGTPGL
Trigger: AAGGCCAGGCGTTCCCGTTCAGCGTCCAGTCCCAGC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTTCTATGGAAAAGCTGTaGCATCCGAGGACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSSMEKL*HPRTKR
Trigger: CCTCTTGGTCCTCGGATGTCACAGCTTTTCCATAGA...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGGGTTAGGTTTTCTCTaGATGGCACGTGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLGLGFL*MARAVP
Trigger: GGGAACAGCACGTGCCATTCAGAGAAAACCTAACCC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGACCGCAGGTCCTGCTaGGGAACTATACACTTCATA +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGDRRSC*GTIHFI
Trigger: TATGAAGTGTATAGTTCCTCAGCAGGACCTGCGGTC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTGTCCCACTGCTGACTaGAGTTGTGGATCCCATGGA +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVCPTAD*SCGSHG
Trigger: TCCATGGGATCCACAACTTCAGTCAGCAGTGGGACA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATGGCTGTCCCACTGCTaGCTGAAGTTGTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLWLSHC*LKLWIP
Trigger: TGGGATCCACAACTTCAGTCAGCAGTGGGACAGCCA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGTGCTGCAAGCTGGGTaGTCCCAAGTCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMVLQAG*SQVSCS
Trigger: GCTGCAGCTGACTTGGGATCACCCAGCTTGCAGCAC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTCACTTAATCGACCTTaGGGGCTGAGATCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSSLNRP*GLRSKE
Trigger: TTCTTTAGATCTCAGCCCTCAAGGTCGATTAAGTGA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGCAGCACAAAGTCTCTaGAGGACATTCAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSAAQSL*RTFNAG
Trigger: CCCTGCATTGAATGTCCTTCAGAGACTTTGTGCTGC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGAACTGCCGTACTGCCTaGTACACAGTCATGTTATAC +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVNCRTA*YTVMLY
Trigger: GTATAACATGACTGTGTATCAGGCAGTACGGCAGTT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGAGATGCTGGAATCAATaGGGCCAAATTTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGRCWNQ*GQICQG
Trigger: GCCCTGGCAAATTTGGCCTCATTGATTCCAGCATCT...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAACCAGAGACAAGCATaGGAAGAGAAAAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSNQRQA*EEKNLR
Trigger: ACGCAGATTTTTCTCTTCTCATGCTTGTCTCTGGTT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTCCACTCTCATTTCCTaGGCTCACGCTCACAGACAG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSTLIS*AHAHRQ
Trigger: CTGTCTGTGAGCGTGAGCTCAGGAAATGAGAGTGGA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAGGAAGCATCTTCAGTaGTTTGTCACTAGGTTATCC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSRKHLQ*FVTRLS
Trigger: GGATAACCTAGTGACAAATCACTGAAGATGCTTCCT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCAGCTGCTCCTCTTTTaGCCAGGCCAGAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLQLLLF*PGQSLA
Trigger: GGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACGATCATCACGCCACTaGCATATCGCACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLRSSRH*HIAPSV
Trigger: CACAGATGGTGCGATATGGCAGTGGCGTGATGATCG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTTCTCTGAATGGCACGTaGTGTTCCCGTGTCCTCATT +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSSLNGT*CSRVLI
Trigger: AATGAGGACACGGGAACAGCACGTGCCATTCAGAGA...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCTAAAGAATCATCCCTaGTGTGCTGCAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGLKNHP*CAASWV
Trigger: CACCCAGCTTGCAGCACAGCAGGGATGATTCTTTAG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGACATGGCCCGTGAGCTaGCGAGGTCCTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMTWPVS*RGPASQ
Trigger: CTGTGATGCAGGACCTCGGCAGCTCACGGGCCATGT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTACATGGCCCGTGAGCTaGCGAGGTCCTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRTWPVS*RGPASQ
Trigger: CTGTGATGCAGGACCTCGGCAGCTCACGGGCCATGT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGAAAGATGGAACGACTaGTGCCCTTCTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSERWND*CPSLAA
Trigger: AGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGTGTGAAAGGTTTCTaGTGGGTTTGGCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVCVKGF*WVWLRH
Trigger: ATGCCTTAGCCAAACCCAGCAGAAACCTTTCACACA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCCCCAGAGGTGGTCATaGCAACAGCCCCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRPQRWS*QQPLQQ
Trigger: CTGTTGCAGGGGCTGTTGGCATGACCACCTCTGGGG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGAGTCGTCTTGTGGTTaGGCCCCGGCAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRESSCG*APAVFL
Trigger: GAGGAACACTGCCGGGGCCCAACCACAAGACGACTC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGAGTCGTCTTGTGGTTaGGCCCCGGCAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMESSCG*APAVFL
Trigger: GAGGAACACTGCCGGGGCCCAACCACAAGACGACTC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCACTCTGGCACCTGGTaGTACAGTGGAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNHSGTW*YSGGGR
Trigger: TCGGCCTCCTCCACTGTACCACCAGGTGCCAGAGTG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCACTCTGGCACCTGGTaGTACAGTGGAGGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMHSGTW*YSGGGR
Trigger: TCGGCCTCCTCCACTGTACCACCAGGTGCCAGAGTG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCCCTGCTACTTCTTCTaGGGCTGGGACTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCPCYFF*GWDWTL
Trigger: CAGCGTCCAGTCCCAGCCCCAGAAGAAGTAGCAGGG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCCCTGCTACTTCTTCTaGGGCTGGGACTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNPCYFF*GWDWTL
Trigger: CAGCGTCCAGTCCCAGCCCCAGAAGAAGTAGCAGGG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTGCTCCGCCTCAAACTaGGGAGCTCAGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNCSASN*GAQQVE
Trigger: CTCCACCTGCTGAGCTCCCCAGTTTGAGGCGGAGCA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTGCTCCGCCTCAAACTaGGGAGCTCAGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGACSASN*GAQQVE
Trigger: CTCCACCTGCTGAGCTCCCCAGTTTGAGGCGGAGCA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGAATTTACTGCCTCCTaGTTGCTTTCAGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSEFTAS*LLSGSA
Trigger: GGCAGACCCTGAAAGCAACCAGGAGGCAGTAAATTC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGCCCCTGCAGCTCCTTaGGGAGCTTCATCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCAPAAP*GASSVR
Trigger: TCGGACAGATGAAGCTCCCCAAGGAGCTGCAGGGGC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283943.9
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCACTCTCCCCAGAGGTaGTCATGCCAACAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNHSPQR*SCQQPL
Trigger: CAGGGGCTGTTGGCATGACCACCTCTGGGGAGAGTG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCACCCGCCTGTAGAATaGCTTTACTATGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGHPPVE*LYYVSV
Trigger: CACGGAGACATAGTAAAGCCATTCTACAGGCGGGTG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGACTATCTTCAGGTCTTaGCTTGACAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVTIFRS*LDSMEA
Trigger: TGCTTCCATGCTGTCAAGCCAAGACCTGAAGATAGT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCAGCTGCAGCATGAGTaGCAGCTGTGGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRQLQHE*QLWLSH
Trigger: GTGGGACAGCCACAGCTGCCACTCATGCTGCAGCTG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCAGCTGCAGCATGAGTaGCAGCTGTGGCTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCQLQHE*QLWLSH
Trigger: GTGGGACAGCCACAGCTGCCACTCATGCTGCAGCTG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCCTTTGAGGCAGCCCTaGCAAGGCCACTACCTCCCG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLPLRQP*QGHYLP
Trigger: CGGGAGGTAGTGGCCTTGCCAGGGCTGCCTCAAAGG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGCTCCACCATCCACCTaGAGGTTGAGTTGTTCGGTT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVAPPST*RLSCSV
Trigger: AACCGAACAACTCAACCTCCAGGTGGATGGTGGAGC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGCTCCACCATCCACCTaGAGGTTGAGTTGTTCGGTT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLAPPST*RLSCSV
Trigger: AACCGAACAACTCAACCTCCAGGTGGATGGTGGAGC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGTTCCACTCTTCCAATaGGCTCTTCTCCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGVPLFQ*ALLQEV
Trigger: CACTTCCTGGAGAAGAGCCCATTGGAAGAGTGGAAC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTAGGTGCATTACCCACTaGTTCCACTCTTCCAATGGG +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSRCITH*FHSSNG
Trigger: CCCATTGGAAGAGTGGAACCAGTGGGTAATGCACCT...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCTCAGTAAGCCATGTTaGGATGTTTCCTGTCATGAT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSLSKPC*DVSCHD
Trigger: ATCATGACAGGAAACATCCCAACATGGCTTACTGAG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTACTTGGTCCCTTCTTaGCTCCCTTTTGGATTGCTA +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVYLVPS*LPFGLL
Trigger: TAGCAATCCAAAAGGGAGCCAAGAAGGGACCAAGTA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGCTACCAGTCACAAACTaGAGAAATAACCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVLPVTN*RNNLCC
Trigger: GCAGCAGAGGTTATTTCTCCAGTTTGTGACTGGTAG...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGAGAGGCTGTTGCTGCTaGAATTGCCATGTAAACAGT +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVRGCCC*NCHVNS
Trigger: ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAGGGGAAGAGGAGCGTaGAATAAAGAAGACTATGAA +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSRGRGA*NKEDYE
Trigger: TTCATAGTCTTCTTTATTCCACGCTCCTCTTCCCCT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGCCAGGGCTGCAACATaGATAAAATGTCAAGTACAG +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVARAAT*IKCQVQ
Trigger: CTGTACTTGACATTTTATCCATGTTGCAGCCCTGGC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGCTCCACAATACGGAGTaGTCACATTCATTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVLHNTE*SHSFEG
Trigger: GCCTTCAAATGAATGTGACCACTCCGTATTGTGGAG...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGCTTATTTGTTTCTaGGGGAGATTCAGTATGCTG +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVWLICF*GRFSML
Trigger: CAGCATACTGAATCTCCCTCAGAAACAAATAAGCCA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTCTTTTCTGACTCCGTaGACCGCCAGTGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCSFLTP*TASGPT
Trigger: AGTGGGGCCACTGGCGGTTCACGGAGTCAGAAAAGA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCTTTTCTGACTCCGTaGACCGCCAGTGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSFLTP*TASGPT
Trigger: AGTGGGGCCACTGGCGGTTCACGGAGTCAGAAAAGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTCTTTTCTGACTCCGTaGACCGCCAGTGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGASFLTP*TASGPT
Trigger: AGTGGGGCCACTGGCGGTTCACGGAGTCAGAAAAGA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTCCCATGACCAGTAACTaGCACATCTCAATAACTGCC +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSPMTSN*HISITA
Trigger: GGCAGTTATTGAGATGTGTCAGTTACTGGTCATGGG...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACTGGAACAACACTCTTaGCAGGAAACCCTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLLEQHS*QETLPV
Trigger: CACTGGGAGGGTTTCCTGTCAAGAGTGTTGTTCCAG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGAATCTGCCACAAAATaGAATTCATCTGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSESATK*NSSGVI
Trigger: TATCACGCCAGATGAATTTCATTTTGTGGCAGATTC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGACCGCAGGTCCTGCTaGGGAACTATACACTTCATA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGDRRSC*GTIHFI
Trigger: TATGAAGTGTATAGTTCCTCAGCAGGACCTGCGGTC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTTCAGGTCTTGGCTTaGCAGCATGGAAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLQVLA*QHGSNV
Trigger: CACATTGCTTCCATGCTGTCAAGCCAAGACCTGAAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTAGGCCCTGGAGGTTTTaGATATACTTGGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSRPWRF*IYLVPS
Trigger: AGAAGGGACCAAGTATATTCAAAACCTCCAGGGCCT...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGTCTTTTCTTCTGTCTaGCAATGTCTTCTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSVFSSV*QCLLGD
Trigger: ATCACCTAGAAGACATTGTCAGACAGAAGAAAAGAC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGAAACCCTGGCAGAGTaGAATCCAGTCCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGETLAE*NPVLDL
Trigger: AAGATCTAGGACTGGATTTCACTCTGCCAGGGTTTC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCGTCGAGACAAAGGCTaGACTGTTTTGTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGRRDKG*TVLSQV
Trigger: GACTTGGGACAAAACAGTTCAGCCTTTGTCTCGACG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTGTCAAACAAGCCACTaGGTTTCTTTTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGCQTSH*VSFGWW
Trigger: CCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAGATGCTGGAATCAATaGGGCCAAATTTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLRCWNQ*GQICQG
Trigger: GCCCTGGCAAATTTGGCCTCATTGATTCCAGCATCT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGTGGTCACATTCATTTaGAGGCACCACTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGVVTFI*RHHSFP
Trigger: TGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCAC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAGGCAGAGGTTGCACTaGGCTGAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRQRLH*AEITPL
Trigger: CAGTGGCGTGATCTCAGCTCAGTGCAACCTCTGCCT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675423.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTCGACGAGCTTCAGCTaGTCCTCTTTTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRSTSFS*SSFAQA
Trigger: GGCCTGGGCAAAAGAGGAGCAGCTGAAGCTCGTCGA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCATGCCAACAGCCCCTaGAGCTCCTTGGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLHANSP*SSLGSF
Trigger: GAAGCTCCCCAAGGAGCTGCAGGGGCTGTTGGCATG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000283943.9
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTATCTCTGAATGGCACGTaGTGTTCCCGTGTCCTCATT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLSLNGT*CSRVLI
Trigger: AATGAGGACACGGGAACAGCACGTGCCATTCAGAGA...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGCATTCAATGCAGGGTTaGTTCCATCCATATTCTCAG +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVHSMQG*FHPYSQ
Trigger: CTGAGAATATGGATGGAAGCAACCCTGCATTGAATG...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGAGCTGCCGAGGTCCTaGATCACAGACTCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLELPRS*ITDSAC
Trigger: ACAGGCGGAGTCTGTGATGCAGGACCTCGGCAGCTC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTACATGGCCCGTGAGCTaGCGAGGTCCTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLTWPVS*RGPASQ
Trigger: CTGTGATGCAGGACCTCGGCAGCTCACGGGCCATGT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGATATGAGCTGGCTTTaGTGTCCTACCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGDMSWL*CPTKGK
Trigger: CTTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTAGATGGAACGACTGCTaGCCTTCTCTTGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVRWNDC*PSLAAI
Trigger: GATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAGATGGAACGACTGCTaGCCTTCTCTTGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGRWNDC*PSLAAI
Trigger: GATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGAAAGATGGAACGACTaGTGCCCTTCTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLERWND*CPSLAA
Trigger: AGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTCCAGAGGCTGTTGCTaGTGGAATTGCCATGTAAAC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGSRGCC*WNCHVN
Trigger: GTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCATTCCAGAGGCTGTTaGTGCTGGAATTGCCATGTA +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGHSRGC*CWNCHV
Trigger: TACATGGCAATTCCAGCAGCAACAGCCTCTGGAATG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCTGGGAGGCAGAGGTTaGACTGAGCTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCLGGRG*TELRSR
Trigger: GCGTGATCTCAGCTCAGTGCAACCTCTGCCTCCCAG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675423.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACTGAACGGGAACGCCTaGCCTTGTTCTGATCTTTTC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLNGNA*PCSDLF
Trigger: GAAAAGATCAGAACAAGGCCAGGCGTTCCCGTTCAG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTACTTCTTCTGGGGCTaGGACTGGACGCTGAACGGG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCYFFWG*DWTLNG
Trigger: CCCGTTCAGCGTCCAGTCCCAGCCCCAGAAGAAGTA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTACTTCTTCTGGGGCTaGGACTGGACGCTGAACGGG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNYFFWG*DWTLNG
Trigger: CCCGTTCAGCGTCCAGTCCCAGCCCCAGAAGAAGTA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCCCTGCTACTTCTTCTaGGGCTGGGACTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLPCYFF*GWDWTL
Trigger: CAGCGTCCAGTCCCAGCCCCAGAAGAAGTAGCAGGG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGAGCCCGTGGTCTTTTaGCGTGTGCTCCGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAEPVVF*RVLRLK
Trigger: TTTGAGGCGGAGCACACGCCAAAAGACCACGGGCTC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGAATTTACTGCCTCCTaGTTGCTTTCAGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGEFTAS*LLSGSA
Trigger: GGCAGACCCTGAAAGCAACCAGGAGGCAGTAAATTC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCCTGACAACTTCCATTaGAGGCACCACACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGPDNFH*RHHTGE
Trigger: TTCTCCTGTGTGGTGCCTCCAATGGAAGTTGTCAGG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGVNPVI*MPEAPI
Trigger: GATCGGGGCCTCTGGCATCCATATAACAGGATTGAC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGTTCCACTCTTCCAATaGGCTCTTCTCCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLVPLFQ*ALLQEV
Trigger: CACTTCCTGGAGAAGAGCCCATTGGAAGAGTGGAAC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGTTCCACTCTTCCAATaGGCTCTTCTCCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGVPLFQ*ALLQEV
Trigger: CACTTCCTGGAGAAGAGCCCATTGGAAGAGTGGAAC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTCAAGGTATCTCTCGATaGCTTGTACCAAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSQGISR*LVPKPE
Trigger: CTCTGGCTTTGGTACAAGCCATCGAGAGATACCTTG...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAGGGGAAGTTTTCGTTaGAGCTGTTTGGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLRGSFR*SCLGSS
Trigger: GGAAGAGCCCAAACAGCTCCAACGAAAACTTCCCCT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTTCTTGGCTCCCTTTTaGATTGCTAAGAGTTACTTC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSFLAPF*IAKSYF
Trigger: GAAGTAACTCTTAGCAATCCAAAAGGGAGCCAAGAA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTATTGGCACCTCTCTCTTaGAGGGACATACCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLAPLS*RDIPFL
Trigger: TAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAA...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGTCCTTTTTCTTTTCTaGCTCCGTGAACCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLVLFLF*LREPPV
Trigger: CACTGGCGGTTCACGGAGTCAGAAAAGAAAAAGGAC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCTCTTCTGCACCAGTTaGTTCAGACCCGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMLFCTS*FRPGAT
Trigger: AGTGGCTCCGGGTCTGAATCAACTGGTGCAGAAGAG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCAGAAGAAGAATCAGTaGTGGTGCTACACCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVQKKNQ*WCYTQL
Trigger: AAGCTGGGTGTAGCACCATCACTGATTCTTCTTCTG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGAGCCCAATCAAATTTTaGAGAGCCACCAGTTTTACT +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVSPIKF*RATSFT
Trigger: AGTAAAACTGGTGGCTCTTCAAAATTTGATTGGGCT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCCCATGACCAGTAACTaGCACATCTCAATAACTGCC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGPMTSN*HISITA
Trigger: GGCAGTTATTGAGATGTGTCAGTTACTGGTCATGGG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTTTTACTATGTCTCCGTaGCAACATCTCCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSFTMSP*QHLQGS
Trigger: ACTGCCTTGGAGATGTTGTCACGGAGACATAGTAAA...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTAGTTCATACAACTCTTaGGGGCTTCGTGGAACAAGA +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSSSYNS*GLRGTR
Trigger: TCTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACT...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTGGCTGTCCCACTGCTaGCTGAAGTTGTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNWLSHC*LKLWIP
Trigger: TGGGATCCACAACTTCAGTCAGCAGTGGGACAGCCA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTGGCTGTCCCACTGCTaGCTGAAGTTGTGGATCCCA +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAWLSHC*LKLWIP
Trigger: TGGGATCCACAACTTCAGTCAGCAGTGGGACAGCCA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGTGCTGCAAGCTGGGTaGTCCCAAGTCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYVLQAG*SQVSCS
Trigger: GCTGCAGCTGACTTGGGATCACCCAGCTTGCAGCAC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGAAGATTTAGGTGACTaGGTAGTGGTGGGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSEDLGD*VVVGLL
Trigger: TAAAAGCCCCACCACTACTCAGTCACCTAAATCTTC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGAAAGAAGATTTAGGTaGCTGAGTAGTGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLERRFR*LSSGGA
Trigger: AGCCCCACCACTACTCAGTCACCTAAATCTTCTTTC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCATCCACCTGGAGGTTaGGTTGTTCGGTTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNHPPGG*VVRLQH
Trigger: GTGCTGCAACCGAACAACTCAACCTCCAGGTGGATG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCCAGAGGGTCAATCTTaGCAGGTCCACCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRPEGQS*QVHPST
Trigger: AGTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACCTGAATTTAGGAACTaGGCAGCCAGAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLPEFRN*AARDSS
Trigger: AGATGAGTCTCTGGCTGCTCAGTTCCTAAATTCAGG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGTCTTTTCTTCTGTCTaGCAATGTCTTCTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVVFSSV*QCLLGD
Trigger: ATCACCTAGAAGACATTGTCAGACAGAAGAAAAGAC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTGTCAAACAAGCCACTaGGTTTCTTTTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVCQTSH*VSFGWW
Trigger: CCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGATGGGCTGCCTCAATaGTCCGGCTGTCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNDGLPQ*SGCQSC
Trigger: ACAGGATTGACAGCCGGATCATTGAGGCAGCCCATC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675423.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCATCCTCACCGACCTaGTGGGCTGCCTCAATGATC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSSSPT*WAASMI
Trigger: GATCATTGAGGCAGCCCATCAGGTCGGTGAGGATGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675423.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGACACATCTCAATAACTaGCTGAAGCTGTTGACTTTC +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVTHLNN*LKLLTF
Trigger: GAAAGTCAACAGCTTCAGGCAGTTATTGAGATGTGT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTATCCTGTTATATGGATaGCAGAGGCCCCGATCATCA +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVILLYG*QRPRSS
Trigger: TGATGATCGGGGCCTCTGGCATCCATATAACAGGAT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTATCCTGTTATATGGATaGCAGAGGCCCCGATCATCA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGILLYG*QRPRSS
Trigger: TGATGATCGGGGCCTCTGGCATCCATATAACAGGAT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTCATCCCTGCTGTGCTaGAAGCTGGGTGATCCCAAG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRSSLLC*KLGDPK
Trigger: CTTGGGATCACCCAGCTTGCAGCACAGCAGGGATGA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTACCTCCCGCAGTCCGTaGTGGCTCAATGTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRTSRSP*WLNVVA
Trigger: AGCAACAACATTGAGCCAGCACGGACTGCGGGAGGT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTACCTCCCGCAGTCCGTaGTGGCTCAATGTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCTSRSP*WLNVVA
Trigger: AGCAACAACATTGAGCCAGCACGGACTGCGGGAGGT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGAGCTGCCGAGGTCCTaGATCACAGACTCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYELPRS*ITDSAC
Trigger: ACAGGCGGAGTCTGTGATGCAGGACCTCGGCAGCTC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGATATGAGCTGGCTTTaGTGTCCTACCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGDMSWL*CPTKGK
Trigger: CTTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCTGAACGAATCAAATTaGCTAGAAACGCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSLNESN*LETPSF
Trigger: AAATGAAGGCGTTTCTAGGCAATTTGATTCGTTCAG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTGCATCCCAAGTGTCTaGTTTACTGCCACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVCIPSV*FTATKE
Trigger: CTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTACTTTTTCCCTCTGGTaGAATAAGGCCTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVTFSLW*NKASAK
Trigger: CTTGGCAGAGGCCTTATTGCACCAGAGGGAAAAAGT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGTGTATGTCAACTACTaGAATGTCAAACCTAAGACT +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSVYVNY*NVKPKT
Trigger: AGTCTTAGGTTTGACATTGCAGTAGTTGACATACAC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCATGCCAACAGCCCCTaGAACAGAACTAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAHANSP*NRTRGC
Trigger: GCAGCCTCTAGTTCTGTTGCAGGGGCTGTTGGCATG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTACCGACCTGATGGGCTaGCTCAATGATCCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLTDLMG*LNDPAV
Trigger: GACAGCCGGATCATTGAGGCAGCCCATCAGGTCGGT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675423.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAGGCCGGTTGGACATTaGCACCTCTCTCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRPVGH*HLSLEG
Trigger: CCCTTCAAGAGAGAGGTGCCAATGTCCAACCGGCCT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTAGTATTGGCTCTGTCTaGATCCTCTGGTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVSIGSV*ILWLWN
Trigger: GTTCCACAACCAGAGGATCCAGACAGAGCCAATACT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAGTATTGGCTCTGTCTaGATCCTCTGGTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSIGSV*ILWLWN
Trigger: GTTCCACAACCAGAGGATCCAGACAGAGCCAATACT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAGTATTGGCTCTGTCTaGATCCTCTGGTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLSIGSV*ILWLWN
Trigger: GTTCCACAACCAGAGGATCCAGACAGAGCCAATACT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGTCTTTCTGAAGTATTaGCTCTGTCTGGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGVFLKY*LCLDPL
Trigger: CAGAGGATCCAGACAGAGCCAATACTTCAGAAAGAC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGTCTTTCTGAAGTATTaGCTCTGTCTGGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSVFLKY*LCLDPL
Trigger: CAGAGGATCCAGACAGAGCCAATACTTCAGAAAGAC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTCCGTGAACCGCCAGTaGCCCCACTCTTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLSVNRQ*PHSSWY
Trigger: ATACCAGGAAGAGTGGGGCCACTGGCGGTTCACGGA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATGCTACACCCAGCTTTaGCTGAGGTGGCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLCYTQL*LRWLIL
Trigger: CAAAATCAGCCACCTCAGCCAAAGCTGGGTGTAGCA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCACCTGGTGGTACAGTaGAGGAGGCCGAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSHLVVQ*RRPRLQ
Trigger: CTGTAGCCTCGGCCTCCTCCACTGTACCACCAGGTG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTTTCACTCTGGCACCTaGTGGTACAGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNFHSGT*WYSGGG
Trigger: GCCTCCTCCACTGTACCACCAGGTGCCAGAGTGAAA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTTTCACTCTGGCACCTaGTGGTACAGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRFHSGT*WYSGGG
Trigger: GCCTCCTCCACTGTACCACCAGGTGCCAGAGTGAAA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCACTCTGGCACCTaGTGGTACAGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMFHSGT*WYSGGG
Trigger: GCCTCCTCCACTGTACCACCAGGTGCCAGAGTGAAA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGGGGAGCTCAGCAGGTaGAGACTCACTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAGELSR*RLTAFL
Trigger: AAGAAACGCAGTGAGTCTCCACCTGCTGAGCTCCCC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTGCTCCGCCTCAAACTaGGGAGCTCAGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYCSASN*GAQQVE
Trigger: CTCCACCTGCTGAGCTCCCCAGTTTGAGGCGGAGCA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGAAAATGAAATTCATCTaGCGTGATACTCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVKMKFI*RDTLAA
Trigger: TGCTGCCAGAGTATCACGCCAGATGAATTTCATTTT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTTCCCTTCTTCAACATaGTATCAACTGCAAAAATGC +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSFPSST*YQLQKC
Trigger: GCATTTTTGCAGTTGATACCATGTTGAAGAAGGGAA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTGCTGTGCTGCAAGCTaGGTGATCCCAAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCCCAAS*VIPSQL
Trigger: CAGCTGACTTGGGATCACCCAGCTTGCAGCACAGCA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCAAGGTATCTCTCGATaGCTTGTACCAAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGQGISR*LVPKPE
Trigger: CTCTGGCTTTGGTACAAGCCATCGAGAGATACCTTG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACAAGGTATCTCTCGATaGCTTGTACCAAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLQGISR*LVPKPE
Trigger: CTCTGGCTTTGGTACAAGCCATCGAGAGATACCTTG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCTACCAGTCACAAACTaGAGAAATAACCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGLPVTN*RNNLCC
Trigger: GCAGCAGAGGTTATTTCTCCAGTTTGTGACTGGTAG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTCCAACAGGCAATCTTaGGCTACCAGTCACAAACTG +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVSNRQS*ATSHKL
Trigger: CAGTTTGTGACTGGTAGCCCAAGATTGCCTGTTGGA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTATCTCCTCATTTCCCATaGCCAGTAACTGACACATCT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLSPHFP*PVTDTS
Trigger: AGATGTGTCAGTTACTGGTCATGGGAAATGAGGAGA...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCTGGAACAACACTCTTaGCAGGAAACCCTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNLEQHS*QETLPV
Trigger: CACTGGGAGGGTTTCCTGTCAAGAGTGTTGTTCCAG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCTGGAACAACACTCTTaGCAGGAAACCCTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCLEQHS*QETLPV
Trigger: CACTGGGAGGGTTTCCTGTCAAGAGTGTTGTTCCAG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGAAATTGTGCTCCATCTaGAGTAACGTAATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVKLCSI*SNVIKA
Trigger: AGCTTTGATTACGTTACTTCAGATGGAGCACAATTT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCCACACAGGAGAAAGTaGAGCGTTTCTGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGPHRRK*SVSAMF
Trigger: AAACATTGCAGAAACGCTTCACTTTCTCCTGTGTGG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAGATCAATCTGTTCCTaGCAACTTCCATTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGRSICS*QLPLEA
Trigger: TGCCTCCAATGGAAGTTGTCAGGAACAGATTGATCT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTAGATCAATCTGTTCCTaGCAACTTCCATTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVRSICS*QLPLEA
Trigger: TGCCTCCAATGGAAGTTGTCAGGAACAGATTGATCT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAGTTCATACAACTCTTaGGGGCTTCGTGGAACAAGA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSSYNS*GLRGTR
Trigger: TCTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGGGTTAGGTTTTCTCTaGATGGCACGTGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRGLGFL*MARAVP
Trigger: GGGAACAGCACGTGCCATTCAGAGAAAACCTAACCC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGGGTTAGGTTTTCTCTaGATGGCACGTGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMGLGFL*MARAVP
Trigger: GGGAACAGCACGTGCCATTCAGAGAAAACCTAACCC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTAAAATTTCTGCCATCTaGAGTGCTCCCACTACTATC +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSKISAI*SAPTTI
Trigger: GATAGTAGTGGGAGCACTTCAGATGGCAGAAATTTT...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTGTCCCACTGCTGACTaGAGTTGTGGATCCCATGGA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCCPTAD*SCGSHG
Trigger: TCCATGGGATCCACAACTTCAGTCAGCAGTGGGACA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGAAGATTTAGGTGACTaGGTAGTGGTGGGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGEDLGD*VVVGLL
Trigger: TAAAAGCCCCACCACTACTCAGTCACCTAAATCTTC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGAAAGAAGATTTAGGTaGCTGAGTAGTGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLERRFR*LSSGGA
Trigger: AGCCCCACCACTACTCAGTCACCTAAATCTTCTTTC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGAAATCGCTTTAATCTaGTCTCTCTGCTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSEIALI*SLCSQH
Trigger: ATGCTGTGAGCAGAGAGATCAGATTAAAGCGATTTC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTATTGTTCCATCTGGCTaGGGCAGTTGTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGIVPSG*GSCSSC
Trigger: ACAAGATGAACAACTGCCTCAGCCAGATGGAACAAT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTATTGTTCCATCTGGCTaGGGCAGTTGTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVIVPSG*GSCSSC
Trigger: ACAAGATGAACAACTGCCTCAGCCAGATGGAACAAT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCCTGTGATCCTCTGTTaGGAGAAAAGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNPVILC*EKSCLL
Trigger: CAGGAGGCAGCTTTTCTCTCAACAGAGGATCACAGG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCCAGAGGGTCAATCTTaGCAGGTCCACCCTTCCACT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLPEGQS*QVHPST
Trigger: AGTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGAGAATCAGACTGGTTaGTTTCTGGGTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSENQTG*FLGWYQ
Trigger: TTGATACCAACCCAGAAATCAACCAGTCTGATTCTC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTTAACCTTTGCGATATaGGCTGGCTTTGCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLTFAI*AGFAVL
Trigger: TAGGACAGCAAAGCCAGCTCATATCGCAAAGGTTAA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTATTAACCTTTGCGATATaGGCTGGCTTTGCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLTFAI*AGFAVL
Trigger: TAGGACAGCAAAGCCAGCTCATATCGCAAAGGTTAA...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCTGCATTTCTTGCTATaGTCAGGAAAGATGGAACGA +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGLHFLL*SGKMER
Trigger: TCGTTCCATCTTTCCTGATCATAGCAAGAAATGCAG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGGGTCACTGCCCAAGTaGACTCTCAGGAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSGSLPK*TLRRGH
Trigger: ATGTCCCCTCCTGAGAGTTCACTTGGGCAGTGACCC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTCCACTCTCATTTCCTaGGCTCACGCTCACAGACAG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCSTLIS*AHAHRQ
Trigger: CTGTCTGTGAGCGTGAGCTCAGGAAATGAGAGTGGA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCAGCAGATGATGAACTaGAGCTTCTTCCTCCTATTG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGQQMMN*SFFLLL
Trigger: CAATAGGAGGAAGAAGCTGCAGTTCATCATCTGCTG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283943.9
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTGGTCTTTTGGCGTGTaGTCCGCCTCAAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLWSFGV*SASNWG
Trigger: TCCCCAGTTTGAGGCGGAGCACACGCCAAAAGACCA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGAGTAAATTCTCCTCATaGTGGAAGTTGTCCACTAGG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGSKFSS*WKLSTR
Trigger: CCTAGTGGACAACTTCCAGCATGAGGAGAATTTACT...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCGATCATCACGCCACTaGCATATCGCACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMRSSRH*HIAPSV
Trigger: CACAGATGGTGCGATATGGCAGTGGCGTGATGATCG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCGATCATCACGCCACTaGCATATCGCACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNRSSRH*HIAPSV
Trigger: CACAGATGGTGCGATATGGCAGTGGCGTGATGATCG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTTCTGCCATCTGAAGTaGTCCCACTACTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGFCHLK*SHYYLQ
Trigger: CTGAAGATAGTAGTGGGAGCACTTCAGATGGCAGAA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTTCTGCCATCTGAAGTaGTCCCACTACTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVFCHLK*SHYYLQ
Trigger: CTGAAGATAGTAGTGGGAGCACTTCAGATGGCAGAA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCGATCCATTCGTACATaGCTTTGGTGGACTTGTCAA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGRSIRT*LWWTCQ
Trigger: TTGACAAGTCCACCAAAGGCATGTACGAATGGATCG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGACAAATTTATGTGCCTaGTCCTTAATCCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSTNLCA*SLIQPL
Trigger: TAAAGGTTGGATTAAGGAGCAGGCACATAAATTTGT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCTGAAGGACATTCAATaGAGGGTTGCTTCCATCCAT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVLKDIQ*RVASIH
Trigger: ATGGATGGAAGCAACCCTGCATTGAATGTCCTTCAG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTGAAGGACATTCAATaGAGGGTTGCTTCCATCCAT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLKDIQ*RVASIH
Trigger: ATGGATGGAAGCAACCCTGCATTGAATGTCCTTCAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTTGAGTTGTTCGGTTaGAGCACAAAGTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVVELFG*STKSLK
Trigger: CTTCAGAGACTTTGTGCTGCAACCGAACAACTCAAC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTCTGCCTAGAGGATTaGTCTCATCATCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLCLED*SHHLWI
Trigger: AATCCACAGATGATGAGAGCAATCCTCTAGGCAGAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACTCTGCCTAGAGGATTaGTCTCATCATCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLCLED*SHHLWI
Trigger: AATCCACAGATGATGAGAGCAATCCTCTAGGCAGAG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTATCCAAATACCAGCTCTaGCTAGAGGATTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLSKYQL*LEDCSH
Trigger: ATGAGAGCAATCCTCTAGGCAGAGCTGGTATTTGGA...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTCCAAATACCAGCTCTaGCTAGAGGATTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSKYQL*LEDCSH
Trigger: ATGAGAGCAATCCTCTAGGCAGAGCTGGTATTTGGA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTTTCCATCAGTGTCTTTaGATCCCAAGTGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSFHQCL*IPSVCF
Trigger: AAAGCAGACACTTGGGATGCAAAGACACTGATGGAA...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTGCCCTTCTCTTGCTaGTATCAACAGTTTTTCACG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLPFSC*YQQFFT
Trigger: CGTGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCTGCCCTTCTCTTGCTaGTATCAACAGTTTTTCACG +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVLPFSC*YQQFFT
Trigger: CGTGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGTAACAGGCAGACACTaGATTTCTTGCTATGATCAG +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSVTGRH*ISCYDQ
Trigger: CTGATCATAGCAAGAAATGCAGTGTCTGCCTGTTAC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAACAGAACTAGAGGCTaGAGCTCCTTGGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCNRTRG*SSLGSF
Trigger: GAAGCTCCCCAAGGAGCTGCAGCCTCTAGTTCTGTT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCATGCCAACAGCCCCTaGAACAGAACTAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLHANSP*NRTRGC
Trigger: GCAGCCTCTAGTTCTGTTGCAGGGGCTGTTGGCATG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACCCTTATGTTTTGCCTaGCCTAAATGTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLPLCFA*PKCDLP
Trigger: AGGAAGGTCACATTTAGGGCAGGCAAAACATAAGGG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTCTTTCTGAAGTATTaGCTCTGTCTGGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVVFLKY*LCLDPL
Trigger: CAGAGGATCCAGACAGAGCCAATACTTCAGAAAGAC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGGTCCTGTTGTAGTCTaGACTAGCACTGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNGPVVV*TSTALH
Trigger: GTGAAGCGCAGTGCTAGTCCAGACTACAACAGGACC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTGGCCCCACTCTTCCTaGTATGAGCCTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCWPHSS*YEPCLL
Trigger: CAACAAGCAAGGCTCATACCAGGAAGAGTGGGGCCA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTCCGTGAACCGCCAGTaGCCCCACTCTTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSSVNRQ*PHSSWY
Trigger: ATACCAGGAAGAGTGGGGCCACTGGCGGTTCACGGA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTTAAACTTGCTAATTTaGCCTGTAATCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVLNLLI*PVIQKV
Trigger: GACCTTCTGGATTACAGGCCAAATTAGCAAGTTTAA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGGGGAGCTCAGCAGGTaGAGACTCACTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLGELSR*RLTAFL
Trigger: AAGAAACGCAGTGAGTCTCCACCTGCTGAGCTCCCC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAAGGCTCGACAAGCATaGTTCATAATATCAAAATTG +
Preference number: 4 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSKARQA*FIISKL
Trigger: CAATTTTGATATTATGAACCATGCTTGTCGAGCCTT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTATCTGGCGTGATACTCTaGCAGCAATTAGCTGCAATT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLSGVIL*QQLAAI
Trigger: AATTGCAGCTAATTGCTGCCAGAGTATCACGCCAGA...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTCTGGCGTGATACTCTaGCAGCAATTAGCTGCAATT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSGVIL*QQLAAI
Trigger: AATTGCAGCTAATTGCTGCCAGAGTATCACGCCAGA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTCTGGCGTGATACTCTaGCAGCAATTAGCTGCAATT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVSGVIL*QQLAAI
Trigger: AATTGCAGCTAATTGCTGCCAGAGTATCACGCCAGA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTAAATTCTCCTCATGCTaGAAGTTGTCCACTAGGCGT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVKFSSC*KLSTRR
Trigger: ACGCCTAGTGGACAACTTCCAGCATGAGGAGAATTT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTATTGGAAGCAACCTGCTaGAGTAAATTCTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLEATC*SKFSSC
Trigger: GCATGAGGAGAATTTACTCCAGCAGGTTGCTTCCAA...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTTGGAAGCAACCTGCTaGAGTAAATTCTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLEATC*SKFSSC
Trigger: GCATGAGGAGAATTTACTCCAGCAGGTTGCTTCCAA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTCTTGAGGGCTTCGTaGAACAAGATCAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLLRAS*NKINLF
Trigger: GAACAGATTGATCTTGTTCCACGAAGCCCTCAAGAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCTCTTGAGGGCTTCGTaGAACAAGATCAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVLLRAS*NKINLF
Trigger: GAACAGATTGATCTTGTTCCACGAAGCCCTCAAGAG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTCTTGGCTTGACAGCATaGAAGCAATGTGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSLGLTA*KQCDLK
Trigger: TTTCAAGTCACATTGCTTCCATGCTGTCAAGCCAAG...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTACTATCTTCAGGTCTTaGCTTGACAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGTIFRS*LDSMEA
Trigger: TGCTTCCATGCTGTCAAGCCAAGACCTGAAGATAGT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTACTTTGGCCTTCTTaGCCCTCGTTTTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCVLWPS*PSFWQS
Trigger: CGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTAC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGTACTTTGGCCTTCTTaGCCCTCGTTTTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRVLWPS*PSFWQS
Trigger: CGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTAC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACCTTCCCCATGTTTTTaGATTCAAGCTTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLPSPCF*IQACQE
Trigger: TTCCTGGCAAGCTTGAATCCAAAAACATGGGGAAGG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCCCGCAGTCCGTGCTaGCTCAATGTTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSRSPC*LNVVAV
Trigger: AACAGCAACAACATTGAGCCAGCACGGACTGCGGGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGCTCCACCATCCACCTaGAGGTTGAGTTGTTCGGTT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMAPPST*RLSCSV
Trigger: AACCGAACAACTCAACCTCCAGGTGGATGGTGGAGC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGCTCCACCATCCACCTaGAGGTTGAGTTGTTCGGTT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNAPPST*RLSCSV
Trigger: AACCGAACAACTCAACCTCCAGGTGGATGGTGGAGC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGGAAATTGTTCCATCTaGCTGAGGCAGTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLGNCSI*LRQLFI
Trigger: GATGAACAACTGCCTCAGCCAGATGGAACAATTTCC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACACTGGATTTCTAACATaGCCCGTGAGCTGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNTGFLT*PVSCRG
Trigger: ACCTCGGCAGCTCACGGGCCATGTTAGAAATCCAGT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTACTGGATTTCTAACATaGCCCGTGAGCTGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGATGFLT*PVSCRG
Trigger: ACCTCGGCAGCTCACGGGCCATGTTAGAAATCCAGT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTACTTGGTCCCTTCTTaGCTCCCTTTTGGATTGCTA +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVYLVPS*LPFGLL
Trigger: TAGCAATCCAAAAGGGAGCCAAGAAGGGACCAAGTA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTACTTGGTCCCTTCTTaGCTCCCTTTTGGATTGCTA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGYLVPS*LPFGLL
Trigger: TAGCAATCCAAAAGGGAGCCAAGAAGGGACCAAGTA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTACCAGTCACAAACTaGAGAAATAACCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLPVTN*RNNLCC
Trigger: GCAGCAGAGGTTATTTCTCCAGTTTGTGACTGGTAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGACAATTGTCAAAGGTaGATTCAAACTCCGGAATCC +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSDNCQR*IQTPES
Trigger: GGATTCCGGAGTTTGAATCCACCTTTGACAATTGTC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGACAATTGTCAAAGGTaGATTCAAACTCCGGAATCC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGDNCQR*IQTPES
Trigger: GGATTCCGGAGTTTGAATCCACCTTTGACAATTGTC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAGAGGCTGTTGCTGCTaGAATTGCCATGTAAACAGT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGRGCCC*NCHVNS
Trigger: ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGGTTTCTGCTGGGTTTaGCTAAGGCATCTAAAACTC +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVGFCWV*LRHLKL
Trigger: GAGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGGTTTCTGCTGGGTTTaGCTAAGGCATCTAAAACTC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGGFCWV*LRHLKL
Trigger: GAGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGTGAAAGGTTTCTGCTaGGTTTGGCTAAGGCATCTA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLVKGFC*VWLRHL
Trigger: TAGATGCCTTAGCCAAACCCAGCAGAAACCTTTCAC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGTGAAAGGTTTCTGCTaGGTTTGGCTAAGGCATCTA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGVKGFC*VWLRHL
Trigger: TAGATGCCTTAGCCAAACCCAGCAGAAACCTTTCAC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACTCCACAATACGGAGTaGTCACATTCATTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLHNTE*SHSFEG
Trigger: GCCTTCAAATGAATGTGACCACTCCGTATTGTGGAG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTGGTGCTCTGTCCCTTaGCCTTCTGTGGTAGGATGT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNWCSVP*PSVVGC
Trigger: ACATCCTACCACAGAAGGCCAAGGGACAGAGCACCA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTGGTGCTCTGTCCCTTaGCCTTCTGTGGTAGGATGT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRWCSVP*PSVVGC
Trigger: ACATCCTACCACAGAAGGCCAAGGGACAGAGCACCA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCGACAGTCCTCAGTGTaGAAAATCAAGAGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVRQSSV*KIKSCG
Trigger: TCCACAACTCTTGATTTTCCACACTGAGGACTGTCG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTGGCTTATTTGTTTCTaGGGGAGATTCAGTATGCTG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGWLICF*GRFSML
Trigger: CAGCATACTGAATCTCCCTCAGAAACAAATAAGCCA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCCACTCTTCCTGGTATaGGCCTTGCTTGTTGATGGT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRPLFLV*ALLVDG
Trigger: ACCATCAACAAGCAAGGCTCATACCAGGAAGAGTGG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGTCCTTTTTCTTTTCTaGCTCCGTGAACCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAVLFLF*LREPPV
Trigger: CACTGGCGGTTCACGGAGTCAGAAAAGAAAAAGGAC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGTCCTTTTTCTTTTCTaGCTCCGTGAACCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRVLFLF*LREPPV
Trigger: CACTGGCGGTTCACGGAGTCAGAAAAGAAAAAGGAC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATCTCTTCTGCACCAGTTaGTTCAGACCCGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYLFCTS*FRPGAT
Trigger: AGTGGCTCCGGGTCTGAATCAACTGGTGCAGAAGAG...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGATCTGTCCGAGCAGCTaGAGAATTTACTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMICPSS*RIYCLL
Trigger: CAGGAGGCAGTAAATTCTTCAGCTGCTCGGACAGAT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTATCTGTCCGAGCAGCTaGAGAATTTACTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRICPSS*RIYCLL
Trigger: CAGGAGGCAGTAAATTCTTCAGCTGCTCGGACAGAT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTCTATGGAAAAGCTGTaGCATCCGAGGACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGASMEKL*HPRTKR
Trigger: CCTCTTGGTCCTCGGATGTCACAGCTTTTCCATAGA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGCCACATCAATACACTaGATAACTTGCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSATSIH*ITCSFS
Trigger: AGAAAAGCTGCAAGTTATTCAGTGTATTGATGTGGC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGAATCTGCCACAAAATaGAATTCATCTGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSESATK*NSSGVI
Trigger: TATCACGCCAGATGAATTTCATTTTGTGGCAGATTC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGACTGACTTTTTATCCTaGTGTGTTAGCCTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGTDFLS*CVSLWV
Trigger: AACCCAAAGGCTAACACATCAGGATAAAAAGTCAGT...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTACTACCAACAGCTGTTaGACATTTGTAAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSTTNSC*TFVSRS
Trigger: AGATCTGCTTACAAATGTTCAACAGCTGTTGGTAGT...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGACCGCAGGTCCTGCTaGGGAACTATACACTTCATA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMDRRSC*GTIHFI
Trigger: TATGAAGTGTATAGTTCCTCAGCAGGACCTGCGGTC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCTTCAGGTCTTGGCTTaGCAGCATGGAAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRLQVLA*QHGSNV
Trigger: CACATTGCTTCCATGCTGTCAAGCCAAGACCTGAAG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCTTCAGGTCTTGGCTTaGCAGCATGGAAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCLQVLA*QHGSNV
Trigger: CACATTGCTTCCATGCTGTCAAGCCAAGACCTGAAG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAAAATTTCTGCCATCTaGAGTGCTCCCACTACTATC +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLKISAI*SAPTTI
Trigger: GATAGTAGTGGGAGCACTTCAGATGGCAGAAATTTT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGCAGCACAAAGTCTCTaGAGGACATTCAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMAAQSL*RTFNAG
Trigger: CCCTGCATTGAATGTCCTTCAGAGACTTTGTGCTGC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGCAGCACAAAGTCTCTaGAGGACATTCAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNAAQSL*RTFNAG
Trigger: CCCTGCATTGAATGTCCTTCAGAGACTTTGTGCTGC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGCAGCACAAAGTCTCTaGAGGACATTCAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAAAQSL*RTFNAG
Trigger: CCCTGCATTGAATGTCCTTCAGAGACTTTGTGCTGC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCAGTTGTTCATCTTGTaGACTAATGCCAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGQLFIL*TNANKG
Trigger: ACCTTTGTTGGCATTAGTTCACAAGATGAACAACTG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCCTGTGATCCTCTGTTaGGAGAAAAGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLPVILC*EKSCLL
Trigger: CAGGAGGCAGCTTTTCTCTCAACAGAGGATCACAGG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGCAACTCTGCTATCTTaGGAATCAGACTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGATLLS*ESDWLI
Trigger: AATCAACCAGTCTGATTCTCAAGATAGCAGAGTTGC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTATCTGGGTTTTCTGTTaGTTCAAACGTCTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGIWVFC*FKRLSD
Trigger: GTCCGAAAGACGTTTGAATCAACAGAAAACCCAGAT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTCATTATCTCAATGCTTaGATAGTCCGGCAACTTAAG +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSHYLNA*IVRQLK
Trigger: CTTAAGTTGCCGGACTATTCAAGCATTGAGATAATG...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCGTCGAGACAAAGGCTaGACTGTTTTGTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRRDKG*TVLSQV
Trigger: GACTTGGGACAAAACAGTTCAGCCTTTGTCTCGACG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAAAGGTCCCGTGTATTaGAGGAGGAATAAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLKGPVY*RRNKLK
Trigger: CTTTAGCTTATTCCTCCTTCAATACACGGGACCTTT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTAACCAGAGACAAGCATaGGAAGAGAAAAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVNQRQA*EEKNLR
Trigger: ACGCAGATTTTTCTCTTCTCATGCTTGTCTCTGGTT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAACCAGAGACAAGCATaGGAAGAGAAAAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLNQRQA*EEKNLR
Trigger: ACGCAGATTTTTCTCTTCTCATGCTTGTCTCTGGTT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAGAAAGGTGTCCCCTTaGCAGTTCAGAAGTAGTATT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGRKVSP*QFRSSI
Trigger: AATACTACTTCTGAACTGTCAAGGGGACACCTTTCT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGCAGATTTCAGTTGTTaGTCCTGGTCTAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVADFSC*SWSKCL
Trigger: GAGACATTTAGACCAGGAGCAACAACTGAAATCTGC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAAGGCAGTCAAGGCCTaGTCTGCCACATCAATACAC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRKAVKA*SATSIH
Trigger: GTGTATTGATGTGGCAGAGCAGGCCTTGACTGCCTT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAAGGCAGTCAAGGCCTaGTCTGCCACATCAATACAC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNKAVKA*SATSIH
Trigger: GTGTATTGATGTGGCAGAGCAGGCCTTGACTGCCTT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAAGGCAGTCAAGGCCTaGTCTGCCACATCAATACAC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCKAVKA*SATSIH
Trigger: GTGTATTGATGTGGCAGAGCAGGCCTTGACTGCCTT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCTCTGAATGGCACGTaGTGTTCCCGTGTCCTCATT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSLNGT*CSRVLI
Trigger: AATGAGGACACGGGAACAGCACGTGCCATTCAGAGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCTAAAGAATCATCCCTaGTGTGCTGCAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRLKNHP*CAASWV
Trigger: CACCCAGCTTGCAGCACAGCAGGGATGATTCTTTAG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCTAAAGAATCATCCCTaGTGTGCTGCAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMLKNHP*CAASWV
Trigger: CACCCAGCTTGCAGCACAGCAGGGATGATTCTTTAG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCTGGCTCAATGTTGTTaGTGTTGGACTGTGTACTTA +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVLAQCC*CWTVYL
Trigger: TAAGTACACAGTCCAACAGCAACAACATTGAGCCAG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATACCTCCCGCAGTCCGTaGTGGCTCAATGTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYTSRSP*WLNVVA
Trigger: AGCAACAACATTGAGCCAGCACGGACTGCGGGAGGT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTACTAAACTGCCGTACTaGCTGATACACAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVTKLPY*LIHSHV
Trigger: AACATGACTGTGTATCAGGCAGTACGGCAGTTTAGT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACTCTGCCTAGAGGATTaGTCTCATCATCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLLCLED*SHHLWI
Trigger: AATCCACAGATGATGAGAGCAATCCTCTAGGCAGAG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGTATCAAGTAATCTTTaGATTGCTCGGTCCCGATCA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLVSSNL*IARSRS
Trigger: TGATCGGGACCGAGCAATGCAAAGATTACTTGATAC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAGATGGAACGACTGCTaGCCTTCTCTTGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNRWNDC*PSLAAI
Trigger: GATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGAAAGATGGAACGACTaGTGCCCTTCTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMERWND*CPSLAA
Trigger: AGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGTAACAGGCAGACACTaGATTTCTTGCTATGATCAG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGVTGRH*ISCYDQ
Trigger: CTGATCATAGCAAGAAATGCAGTGTCTGCCTGTTAC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATCACTTGTCAGTCTCTaGAGAGACAGGGAGAGAATT +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLSLVSL*RDRERI
Trigger: AATTCTCTCCCTGTCTCTGCAGAGACTGACAAGTGA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACTAAAACTCCGTGTCTaGTCCCAATTAGTCTACCTA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLKLRV*SQLVYL
Trigger: TAGGTAGACTAATTGGGAGCAGACACGGAGTTTTAG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAACAGAACTAGAGGCTaGAGCTCCTTGGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLNRTRG*SSLGSF
Trigger: GAAGCTCCCCAAGGAGCTGCAGCCTCTAGTTCTGTT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTACCGACCTGATGGGCTaGTACCTCAATGATCCGGCT +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSTDLMG*YLNDPA
Trigger: AGCCGGATCATTGAGGTAGCAGCCCATCAGGTCGGT...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675453.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTGGCCCCACTCTTCCTaGTATGAGCCTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLWPHSS*YEPCLL
Trigger: CAACAAGCAAGGCTCATACCAGGAAGAGTGGGGCCA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTGCTACACCCAGCTTTaGCTGAGGTGGCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRCYTQL*LRWLIL
Trigger: CAAAATCAGCCACCTCAGCCAAAGCTGGGTGTAGCA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTGCTACACCCAGCTTTaGCTGAGGTGGCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNCYTQL*LRWLIL
Trigger: CAAAATCAGCCACCTCAGCCAAAGCTGGGTGTAGCA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCTGAACGGGAACGCCTaGCCTTGTTCTGATCTTTTC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRLNGNA*PCSDLF
Trigger: GAAAAGATCAGAACAAGGCCAGGCGTTCCCGTTCAG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCTGAACGGGAACGCCTaGCCTTGTTCTGATCTTTTC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNLNGNA*PCSDLF
Trigger: GAAAAGATCAGAACAAGGCCAGGCGTTCCCGTTCAG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTCTTCCAATTGTTCTATaGAAAAGCTGTGACATCCGA +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSLPIVL*KSCDIR
Trigger: TCGGATGTCACAGCTTTTCCATAGAACAATTGGAAG...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCCTTGTAGTAGCTGCTaGGCCTTAGAACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCPCSSC*ALELAP
Trigger: TGGAGCTAGTTCTAAGGCCCAGCAGCTACTACAAGG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGTTGACTTTCATCACTaGCTTGCAATCCTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGVDFHH*LAILVV
Trigger: TACTACAAGGATTGCAAGCCAGTGATGAAAGTCAAC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGAAGGCTCGACAAGCATaGTTCATAATATCAAAATTG +
Preference number: 4 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVKARQA*FIISKL
Trigger: CAATTTTGATATTATGAACCATGCTTGTCGAGCCTT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCACCCGCCTGTAGAATaGCTTTACTATGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCHPPVE*LYYVSV
Trigger: CACGGAGACATAGTAAAGCCATTCTACAGGCGGGTG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTAAAATGAAATTCATCTaGCGTGATACTCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSKMKFI*RDTLAA
Trigger: TGCTGCCAGAGTATCACGCCAGATGAATTTCATTTT...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATTGGAAGCAACCTGCTaGAGTAAATTCTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLLEATC*SKFSSC
Trigger: GCATGAGGAGAATTTACTCCAGCAGGTTGCTTCCAA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCCTGACAACTTCCATTaGAGGCACCACACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCPDNFH*RHHTGE
Trigger: TTCTCCTGTGTGGTGCCTCCAATGGAAGTTGTCAGG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCVNPVI*MPEAPI
Trigger: GATCGGGGCCTCTGGCATCCATATAACAGGATTGAC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATC +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAVNPVI*MPEAPI
Trigger: GATCGGGGCCTCTGGCATCCATATAACAGGATTGAC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTTGGCTTGACAGCATaGAAGCAATGTGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLGLTA*KQCDLK
Trigger: TTTCAAGTCACATTGCTTCCATGCTGTCAAGCCAAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGATTCGTACATGCCTTTaGTGGACTTGTCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGIRTCL*WTCQQR
Trigger: TCTTTGTTGACAAGTCCACCAAAGGCATGTACGAAT...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTGCTGTGCTGCAAGCTaGGTGATCCCAAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSCCAAS*VIPSQL
Trigger: CAGCTGACTTGGGATCACCCAGCTTGCAGCACAGCA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCAATGTTGTTGCTGTTaGACTGTGTACTTAACCTTC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGQCCCC*TVYLTF
Trigger: GAAGGTTAAGTACACAGTCCAACAGCAACAACATTG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTTCCACTCTTCCAATaGGCTCTTCTCCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCVPLFQ*ALLQEV
Trigger: CACTTCCTGGAGAAGAGCCCATTGGAAGAGTGGAAC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAGGTGCATTACCCACTaGTTCCACTCTTCCAATGGG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRRCITH*FHSSNG
Trigger: CCCATTGGAAGAGTGGAACCAGTGGGTAATGCACCT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAGGTGCATTACCCACTaGTTCCACTCTTCCAATGGG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNRCITH*FHSSNG
Trigger: CCCATTGGAAGAGTGGAACCAGTGGGTAATGCACCT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAGGTGCATTACCCACTaGTTCCACTCTTCCAATGGG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRCITH*FHSSNG
Trigger: CCCATTGGAAGAGTGGAACCAGTGGGTAATGCACCT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGGAAATTGTTCCATCTaGCTGAGGCAGTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLGNCSI*LRQLFI
Trigger: GATGAACAACTGCCTCAGCCAGATGGAACAATTTCC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATTCGTTGGAGCTGTTTaGGCTCTTCCTCTTTTACCA +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLFVGAV*ALPLLP
Trigger: TGGTAAAAGAGGAAGAGCCCAAACAGCTCCAACGAA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAGGGGAAGTTTTCGTTaGAGCTGTTTGGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNRGSFR*SCLGSS
Trigger: GGAAGAGCCCAAACAGCTCCAACGAAAACTTCCCCT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAGGGGAAGTTTTCGTTaGAGCTGTTTGGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRRGSFR*SCLGSS
Trigger: GGAAGAGCCCAAACAGCTCCAACGAAAACTTCCCCT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATATGATCAGGAAAGATaGAACGACTGCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLYDQER*NDCCPS
Trigger: AGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCATA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGTTTCTTACGATGAGTaGCTGTGTGAAAGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLVSYDE*LCERFL
Trigger: CAGAAACCTTTCACACAGCCACTCATCGTAAGAAAC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGTGGATCTAATTTCTTaGATACTGAAGTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGVDLIS*ILKLVL
Trigger: GAGCACCAACTTCAGTATCCAAGAAATTAGATCCAC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
3UTR CAA 72 bp TCAGTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTaGGATACTGAAGTTGGTGCTCTGTCCCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SVWKIKSCGSNF*DTEVGALSLGL
Trigger: AAGGCCAAGGGACAGAGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTGGCACCTCTCTCTTaGAGGGACATACCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMLAPLS*RDIPFL
Trigger: TAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGTCCTTTTTCTTTTCTaGCTCCGTGAACCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLVLFLF*LREPPV
Trigger: CACTGGCGGTTCACGGAGTCAGAAAAGAAAAAGGAC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCAGAAGAAGAATCAGTaGTGGTGCTACACCCAGCTT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMQKKNQ*WCYTQL
Trigger: AAGCTGGGTGTAGCACCATCACTGATTCTTCTTCTG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCAGAAGAAGAATCAGTaGTGGTGCTACACCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAQKKNQ*WCYTQL
Trigger: AAGCTGGGTGTAGCACCATCACTGATTCTTCTTCTG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCGCCTGGCCTTGTTCTaGTCTTTTCCTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRRLALF*SFPCFT
Trigger: AGTGAAACAAGGAAAAGATCAGAACAAGGCCAGGCG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCGCCTGGCCTTGTTCTaGTCTTTTCCTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNRLALF*SFPCFT
Trigger: AGTGAAACAAGGAAAAGATCAGAACAAGGCCAGGCG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCGCCTGGCCTTGTTCTaGTCTTTTCCTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGARLALF*SFPCFT
Trigger: AGTGAAACAAGGAAAAGATCAGAACAAGGCCAGGCG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAGCCCAATCAAATTTTaGAGAGCCACCAGTTTTACT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLSPIKF*RATSFT
Trigger: AGTAAAACTGGTGGCTCTTCAAAATTTGATTGGGCT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTCTATGGAAAAGCTGTaGCATCCGAGGACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLSMEKL*HPRTKR
Trigger: CCTCTTGGTCCTCGGATGTCACAGCTTTTCCATAGA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCCCATGACCAGTAACTaGCACATCTCAATAACTGCC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMPMTSN*HISITA
Trigger: GGCAGTTATTGAGATGTGTCAGTTACTGGTCATGGG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCCCATGACCAGTAACTaGCACATCTCAATAACTGCC +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAPMTSN*HISITA
Trigger: GGCAGTTATTGAGATGTGTCAGTTACTGGTCATGGG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCTGGAACAACACTCTTaGCAGGAAACCCTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSLEQHS*QETLPV
Trigger: CACTGGGAGGGTTTCCTGTCAAGAGTGTTGTTCCAG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGCCACATCAATACACTaGATAACTTGCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGATSIH*ITCSFS
Trigger: AGAAAAGCTGCAAGTTATTCAGTGTATTGATGTGGC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGCAAGTGCTTTCTACTaGCTTTTTATCCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGASAFY*LFILMC
Trigger: ACACATCAGGATAAAAAGTCAGTAGAAAGCACTTGC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTACTACCAACAGCTGTTaGACATTTGTAAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGTTNSC*TFVSRS
Trigger: AGATCTGCTTACAAATGTTCAACAGCTGTTGGTAGT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGCTAAGTGTTTTACTTaGTGCATTACACCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGAKCFT*CITPSL
Trigger: AAGAGAAGGTGTAATGCATCAAGTAAAACACTTAGC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTATCGACCTTGAGGGCTaGGATCTAAAGAATCATCCC +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAIDLEG*DLKNHP
Trigger: GGGATGATTCTTTAGATCTCAGCCCTCAAGGTCGAT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTATCGACCTTGAGGGCTaGGATCTAAAGAATCATCCC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCIDLEG*DLKNHP
Trigger: GGGATGATTCTTTAGATCTCAGCCCTCAAGGTCGAT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTATCGACCTTGAGGGCTaGGATCTAAAGAATCATCCC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRIDLEG*DLKNHP
Trigger: GGGATGATTCTTTAGATCTCAGCCCTCAAGGTCGAT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGTGGGGCTTTTAGCTTaGTTGTCTACTTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLVGLLA*LSTLSS
Trigger: TGATGACAAAGTAGACAATCAAGCTAAAAGCCCCAC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGAAAGAAGATTTAGGTaGCTGAGTAGTGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCERRFR*LSSGGA
Trigger: AGCCCCACCACTACTCAGTCACCTAAATCTTCTTTC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACAGTTGTTCATCTTGTaGACTAATGCCAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLQLFIL*TNANKG
Trigger: ACCTTTGTTGGCATTAGTTCACAAGATGAACAACTG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCCTGAATTTAGGAACTaGGCAGCCAGAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRPEFRN*AARDSS
Trigger: AGATGAGTCTCTGGCTGCTCAGTTCCTAAATTCAGG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCCTGAATTTAGGAACTaGGCAGCCAGAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMPEFRN*AARDSS
Trigger: AGATGAGTCTCTGGCTGCTCAGTTCCTAAATTCAGG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCCTGAATTTAGGAACTaGGCAGCCAGAGACTCATCT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAPEFRN*AARDSS
Trigger: AGATGAGTCTCTGGCTGCTCAGTTCCTAAATTCAGG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGAGGCCCTGGAGGTTTTaGATATACTTGGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMRPWRF*IYLVPS
Trigger: AGAAGGGACCAAGTATATTCAAAACCTCCAGGGCCT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAGGCCCTGGAGGTTTTaGATATACTTGGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNRPWRF*IYLVPS
Trigger: AGAAGGGACCAAGTATATTCAAAACCTCCAGGGCCT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGAAACCCTGGCAGAGTaGAATCCAGTCCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAETLAE*NPVLDL
Trigger: AAGATCTAGGACTGGATTTCACTCTGCCAGGGTTTC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGAAACCCTGGCAGAGTaGAATCCAGTCCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRETLAE*NPVLDL
Trigger: AAGATCTAGGACTGGATTTCACTCTGCCAGGGTTTC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGAAACCCTGGCAGAGTaGAATCCAGTCCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMETLAE*NPVLDL
Trigger: AAGATCTAGGACTGGATTTCACTCTGCCAGGGTTTC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTGTCAAACAAGCCACTaGGTTTCTTTTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRCQTSH*VSFGWW
Trigger: CCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGTGGTCACATTCATTTaGAGGCACCACTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRVVTFI*RHHSFP
Trigger: TGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCAC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTCCACTCTCATTTCCTaGGCTCACGCTCACAGACAG +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYSTLIS*AHAHRQ
Trigger: CTGTCTGTGAGCGTGAGCTCAGGAAATGAGAGTGGA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAACCATCTGTGTTCTGTaGATTTCCCTTCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLTICVL*ISLLQH
Trigger: ATGTTGAAGAAGGGAAATGCACAGAACACAGATGGT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTACCATCTGTGTTCTGTaGATTTCCCTTCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGTICVL*ISLLQH
Trigger: ATGTTGAAGAAGGGAAATGCACAGAACACAGATGGT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCGATCATCACGCCACTaGCATATCGCACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSRSSRH*HIAPSV
Trigger: CACAGATGGTGCGATATGGCAGTGGCGTGATGATCG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCTAAAGAATCATCCCTaGTGTGCTGCAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLLKNHP*CAASWV
Trigger: CACCCAGCTTGCAGCACAGCAGGGATGATTCTTTAG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACTGGCTCAATGTTGTTaGTGTTGGACTGTGTACTTA +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLLAQCC*CWTVYL
Trigger: TAAGTACACAGTCCAACAGCAACAACATTGAGCCAG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACATTCAATGCAGGGTTaGTTCCATCCATATTCTCAG +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLHSMQG*FHPYSQ
Trigger: CTGAGAATATGGATGGAAGCAACCCTGCATTGAATG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCCACTGCTTCACATTTaGACAGTCTGGATGCCTTTG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMPLLHI*TVWMPL
Trigger: CAAAGGCATCCAGACTGTGCAAATGTGAAGCAGTGG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCCACTGCTTCACATTTaGACAGTCTGGATGCCTTTG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRPLLHI*TVWMPL
Trigger: CAAAGGCATCCAGACTGTGCAAATGTGAAGCAGTGG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGTATCAAGTAATCTTTaGATTGCTCGGTCCCGATCA +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLVSSNL*IARSRS
Trigger: TGATCGGGACCGAGCAATGCAAAGATTACTTGATAC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTCTATCCAATCTAGGTaGAACTCTGCTATCTTGAGA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSIQSR*NSAILR
Trigger: TCTCAAGATAGCAGAGTTGCACCTAGATTGGATAGA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGATATGAGCTGGCTTTaGTGTCCTACCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMDMSWL*CPTKGK
Trigger: CTTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAGATGGAACGACTGCTaGCCTTCTCTTGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLRWNDC*PSLAAI
Trigger: GATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTAGACACTGCATTTCTTaGTATGATCAGGAAAGATGG +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVRHCIS*YDQERW
Trigger: CCATCTTTCCTGATCATAGCAAGAAATGCAGTGTCT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTATGACTGGACAGCATTaGTTACAGGTGCTTTTATCT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGMTGQH*LQVLLS
Trigger: AGATAAAAGCACCTGTAAGCAATGCTGTCCAGTCAT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTCCTTGTGCTTAATTTaGAGGAAGATATCAGAACAG +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGSLCLI*RKISEQ
Trigger: CTGTTCTGATATCTTCCTGCAAATTAAGCACAAGGA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACAAATTTGCCAGGGCTaGAACATGGATAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLQICQG*NMDKMS
Trigger: TGACATTTTATCCATGTTGCAGCCCTGGCAAATTTG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGACTTTTTCCCTCTGGTaGAATAAGGCCTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMTFSLW*NKASAK
Trigger: CTTGGCAGAGGCCTTATTGCACCAGAGGGAAAAAGT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGTAGGATGTATAGGATaGCCTAGGGAAGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRVGCIG*PREVTP
Trigger: TGGAGTGACTTCCCTAGGGCATCCTATACATCCTAC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGAAGTAGTATTAGACTaGACTTTGGGTGCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVEVVLD*TLGALE
Trigger: TTCTAAGGCACCCAAAGTGCAGTCTAATACTACTTC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGGTCCTGTTGTAGTCTaGACTAGCACTGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYGPVVV*TSTALH
Trigger: GTGAAGCGCAGTGCTAGTCCAGACTACAACAGGACC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTGGCCCCACTCTTCCTaGTATGAGCCTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSWPHSS*YEPCLL
Trigger: CAACAAGCAAGGCTCATACCAGGAAGAGTGGGGCCA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTGCTACACCCAGCTTTaGCTGAGGTGGCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLCYTQL*LRWLIL
Trigger: CAAAATCAGCCACCTCAGCCAAAGCTGGGTGTAGCA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACTTCCAATTGTTCTATaGAAAAGCTGTGACATCCGA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLPIVL*KSCDIR
Trigger: TCGGATGTCACAGCTTTTCCATAGAACAATTGGAAG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCCTTGTAGTAGCTGCTaGGCCTTAGAACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLPCSSC*ALELAP
Trigger: TGGAGCTAGTTCTAAGGCCCAGCAGCTACTACAAGG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTTGACTTTCATCACTaGCTTGCAATCCTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVVDFHH*LAILVV
Trigger: TACTACAAGGATTGCAAGCCAGTGATGAAAGTCAAC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLVNPVI*MPEAPI
Trigger: GATCGGGGCCTCTGGCATCCATATAACAGGATTGAC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACTTGGCTTGACAGCATaGAAGCAATGTGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLLGLTA*KQCDLK
Trigger: TTTCAAGTCACATTGCTTCCATGCTGTCAAGCCAAG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAAGTTGTGGATCCCATaGATCCCGATCCATTCGTAC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRKLWIP*IPIHSY
Trigger: GTACGAATGGATCGGGATCCATGGGATCCACAACTT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAAGTTGTGGATCCCATaGATCCCGATCCATTCGTAC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCKLWIP*IPIHSY
Trigger: GTACGAATGGATCGGGATCCATGGGATCCACAACTT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGAAGTTGTGGATCCCATaGATCCCGATCCATTCGTAC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMKLWIP*IPIHSY
Trigger: GTACGAATGGATCGGGATCCATGGGATCCACAACTT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGTACTTTGGCCTTCTTaGCCCTCGTTTTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYVLWPS*PSFWQS
Trigger: CGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTAC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTCCCGCAGTCCGTGCTaGCTCAATGTTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYSRSPC*LNVVAV
Trigger: AACAGCAACAACATTGAGCCAGCACGGACTGCGGGA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGATATTGGGAAACCCTaGCAGAGTGAAATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCDIGKP*QSEIQS
Trigger: GGACTGGATTTCACTCTGCCAGGGTTTCCCAATATC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGATATTGGGAAACCCTaGCAGAGTGAAATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMDIGKP*QSEIQS
Trigger: GGACTGGATTTCACTCTGCCAGGGTTTCCCAATATC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTATTGTGGATAGTGACTaGTATATCCTTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVIVDSD*YILPSF
Trigger: AAAGGAGGGAAGGATATACCAGTCACTATCCACAAT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTCCAACAGGCAATCTTaGGCTACCAGTCACAAACTG +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGASNRQS*ATSHKL
Trigger: CAGTTTGTGACTGGTAGCCCAAGATTGCCTGTTGGA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCCAACAGGCAATCTTaGGCTACCAGTCACAAACTG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSNRQS*ATSHKL
Trigger: CAGTTTGTGACTGGTAGCCCAAGATTGCCTGTTGGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTCCAACAGGCAATCTTaGGCTACCAGTCACAAACTG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRSNRQS*ATSHKL
Trigger: CAGTTTGTGACTGGTAGCCCAAGATTGCCTGTTGGA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCACAACTGTTGTCACTaGAGCTGCTTCCTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRHNCCH*SCFLVS
Trigger: GGAAACTAGGAAGCAGCTCCAGTGACAACAGTTGTG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675423.1
3UTR CAA 72 bp GGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTTaGGACCTTAGGAAGGAATCTCCTCCCATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GKFLQIYATGLV*DLRKESPPIFS
Trigger: AGAGAAAATGGGAGGAGATTCCTTCCTAAGGTCCAAAACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATCCACTCTTCCTGGTATaGGCCTTGCTTGTTGATGGT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYPLFLV*ALLVDG
Trigger: ACCATCAACAAGCAAGGCTCATACCAGGAAGAGTGG...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTATCTGTCCGAGCAGCTaGAGAATTTACTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSICPSS*RIYCLL
Trigger: CAGGAGGCAGTAAATTCTTCAGCTGCTCGGACAGAT...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCTCCTCATTTCCCATaGCCAGTAACTGACACATCT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSPHFP*PVTDTS
Trigger: AGATGTGTCAGTTACTGGTCATGGGAAATGAGGAGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTAAATTGTGCTCCATCTaGAGTAACGTAATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVKLCSI*SNVIKA
Trigger: AGCTTTGATTACGTTACTTCAGATGGAGCACAATTT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGCCACATCAATACACTaGATAACTTGCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLATSIH*ITCSFS
Trigger: AGAAAAGCTGCAAGTTATTCAGTGTATTGATGTGGC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTTTACTATGTCTCCGTaGCAACATCTCCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNFTMSP*QHLQGS
Trigger: ACTGCCTTGGAGATGTTGTCACGGAGACATAGTAAA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTACTATGTCTCCGTaGCAACATCTCCAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMFTMSP*QHLQGS
Trigger: ACTGCCTTGGAGATGTTGTCACGGAGACATAGTAAA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCCACACAGGAGAAAGTaGAGCGTTTCTGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNPHRRK*SVSAMF
Trigger: AAACATTGCAGAAACGCTTCACTTTCTCCTGTGTGG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAGATCAATCTGTTCCTaGCAACTTCCATTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRSICS*QLPLEA
Trigger: TGCCTCCAATGGAAGTTGTCAGGAACAGATTGATCT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAGTTCATACAACTCTTaGGGGCTTCGTGGAACAAGA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRSSYNS*GLRGTR
Trigger: TCTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGACCGCAGGTCCTGCTaGGGAACTATACACTTCATA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSDRRSC*GTIHFI
Trigger: TATGAAGTGTATAGTTCCTCAGCAGGACCTGCGGTC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATCTTCAGGTCTTGGCTTaGCAGCATGGAAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYLQVLA*QHGSNV
Trigger: CACATTGCTTCCATGCTGTCAAGCCAAGACCTGAAG...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTATTGTTCCATCTGGCTaGGGCAGTTGTTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRIVPSG*GSCSSC
Trigger: ACAAGATGAACAACTGCCTCAGCCAGATGGAACAAT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTGCCGTACTGCCTaGTACACAGTCATGTTATAC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRNCRTA*YTVMLY
Trigger: GTATAACATGACTGTGTATCAGGCAGTACGGCAGTT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAACTGCCGTACTGCCTaGTACACAGTCATGTTATAC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNNCRTA*YTVMLY
Trigger: GTATAACATGACTGTGTATCAGGCAGTACGGCAGTT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCAGGTGGTGTGGGAATaGGGTAAACTTCTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMQVVWE*GKLLKD
Trigger: ATCCTTTAGAAGTTTACCTCATTCCCACACCACCTG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCAGGTGGTGTGGGAATaGGGTAAACTTCTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCQVVWE*GKLLKD
Trigger: ATCCTTTAGAAGTTTACCTCATTCCCACACCACCTG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCAGGTGGTGTGGGAATaGGGTAAACTTCTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNQVVWE*GKLLKD
Trigger: ATCCTTTAGAAGTTTACCTCATTCCCACACCACCTG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCAGGTGGTGTGGGAATaGGGTAAACTTCTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAQVVWE*GKLLKD
Trigger: ATCCTTTAGAAGTTTACCTCATTCCCACACCACCTG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGGATGTTTCCTGTCATaGTTACTAAAGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGGCFLS*LLKDLE
Trigger: TTCAAGATCCTTTAGTAATCATGACAGGAAACATCC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAAAATCAGAGGAAAGTaGAAAGCACATAGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGKIRGK*KAHRAS
Trigger: ACTAGCTCTATGTGCTTTTCACTTTCCTCTGATTTT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATCGTCGAGACAAAGGCTaGACTGTTTTGTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYRRDKG*TVLSQV
Trigger: GACTTGGGACAAAACAGTTCAGCCTTTGTCTCGACG...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAATCCTTGTAGTAGCTaGTGGGCCTTAGAACTAGCT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCNPCSS*WALELA
Trigger: AGCTAGTTCTAAGGCCCAGCAGCTACTACAAGGATT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTAATCCTTGTAGTAGCTaGTGGGCCTTAGAACTAGCT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGANPCSS*WALELA
Trigger: AGCTAGTTCTAAGGCCCAGCAGCTACTACAAGGATT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCTTTCATCACTGGCTTaGAATCCTTGTAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGALSSLA*NPCSSC
Trigger: GCAGCTACTACAAGGATTGCAAGCCAGTGATGAAAG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCTTTCATCACTGGCTTaGAATCCTTGTAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRLSSLA*NPCSSC
Trigger: GCAGCTACTACAAGGATTGCAAGCCAGTGATGAAAG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTATCCTGTTATATGGATaGCAGAGGCCCCGATCATCA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLILLYG*QRPRSS
Trigger: TGATGATCGGGGCCTCTGGCATCCATATAACAGGAT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTCTGCCATCTGAAGTaGTCCCACTACTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMFCHLK*SHYYLQ
Trigger: CTGAAGATAGTAGTGGGAGCACTTCAGATGGCAGAA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTTCTGCCATCTGAAGTaGTCCCACTACTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRFCHLK*SHYYLQ
Trigger: CTGAAGATAGTAGTGGGAGCACTTCAGATGGCAGAA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCGATCCATTCGTACATaGCTTTGGTGGACTTGTCAA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRSIRT*LWWTCQ
Trigger: TTGACAAGTCCACCAAAGGCATGTACGAATGGATCG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCGATCCATTCGTACATaGCTTTGGTGGACTTGTCAA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRRSIRT*LWWTCQ
Trigger: TTGACAAGTCCACCAAAGGCATGTACGAATGGATCG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTACAAATTTATGTGCCTaGTCCTTAATCCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSTNLCA*SLIQPL
Trigger: TAAAGGTTGGATTAAGGAGCAGGCACATAAATTTGT...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCTGAAGGACATTCAATaGAGGGTTGCTTCCATCCAT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRLKDIQ*RVASIH
Trigger: ATGGATGGAAGCAACCCTGCATTGAATGTCCTTCAG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTTGAGTTGTTCGGTTaGAGCACAAAGTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCVELFG*STKSLK
Trigger: CTTCAGAGACTTTGTGCTGCAACCGAACAACTCAAC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGTTGAGTTGTTCGGTTaGAGCACAAAGTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMVELFG*STKSLK
Trigger: CTTCAGAGACTTTGTGCTGCAACCGAACAACTCAAC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCCAAATACCAGCTCTaGCTAGAGGATTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMSKYQL*LEDCSH
Trigger: ATGAGAGCAATCCTCTAGGCAGAGCTGGTATTTGGA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTGAACGAATCAAATTaGCTAGAAACGCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLNESN*LETPSF
Trigger: AAATGAAGGCGTTTCTAGGCAATTTGATTCGTTCAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACTGAACGAATCAAATTaGCTAGAAACGCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLNESN*LETPSF
Trigger: AAATGAAGGCGTTTCTAGGCAATTTGATTCGTTCAG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTGCATCCCAAGTGTCTaGTTTACTGCCACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLCIPSV*FTATKE
Trigger: CTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCTGCCCTTCTCTTGCTaGTATCAACAGTTTTTCACG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNLPFSC*YQQFFT
Trigger: CGTGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGAAAGATGGAACGACTaGTGCCCTTCTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYERWND*CPSLAA
Trigger: AGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACACAGGTGCTTTTATCTaGGTCGAGACAAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNTGAFI*VETKAE
Trigger: TTCAGCCTTTGTCTCGACGCAGATAAAAGCACCTGT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTAGCATTGCTTACAGGTaGTTTTATCTGCGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGASIAYR*FYLRRD
Trigger: GTCTCGACGCAGATAAAAGCACCTGTAAGCAATGCT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAGCATTGCTTACAGGTaGTTTTATCTGCGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCSIAYR*FYLRRD
Trigger: GTCTCGACGCAGATAAAAGCACCTGTAAGCAATGCT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAATTCCTTCAAATTTATaGCACAGGCCTAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLIPSNL*HRPSFG
Trigger: TCCAAAACTAGGCCTGTGGCATAAATTTGAAGGAAT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCACTTGTCAGTCTCTaGAGAGACAGGGAGAGAATT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSLVSL*RDRERI
Trigger: AATTCTCTCCCTGTCTCTGCAGAGACTGACAAGTGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTACTTTTTCCCTCTGGTaGAATAAGGCCTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLTFSLW*NKASAK
Trigger: CTTGGCAGAGGCCTTATTGCACCAGAGGGAAAAAGT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTGTGAAAGGTTTCTaGTGGGTTTGGCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMCVKGF*WVWLRH
Trigger: ATGCCTTAGCCAAACCCAGCAGAAACCTTTCACACA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTGTGTGAAAGGTTTCTaGTGGGTTTGGCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNCVKGF*WVWLRH
Trigger: ATGCCTTAGCCAAACCCAGCAGAAACCTTTCACACA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGTGTATGTCAACTACTaGAATGTCAAACCTAAGACT +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGVYVNY*NVKPKT
Trigger: AGTCTTAGGTTTGACATTGCAGTAGTTGACATACAC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCCCTTATGTTTTGCCTaGCCTAAATGTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCPLCFA*PKCDLP
Trigger: AGGAAGGTCACATTTAGGGCAGGCAAAACATAAGGG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCCCTTATGTTTTGCCTaGCCTAAATGTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAPLCFA*PKCDLP
Trigger: AGGAAGGTCACATTTAGGGCAGGCAAAACATAAGGG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAGACTGCACTTTGGGTaGCTTAGAATTAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLRLHFG*LRIRFS
Trigger: AGAAAATCTAATTCTAAGGCACCCAAAGTGCAGTCT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCTGAACGGGAACGCCTaGCCTTGTTCTGATCTTTTC +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSLNGNA*PCSDLF
Trigger: GAAAAGATCAGAACAAGGCCAGGCGTTCCCGTTCAG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGAATTTACTGCCTCCTaGTTGCTTTCAGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYEFTAS*LLSGSA
Trigger: GGCAGACCCTGAAAGCAACCAGGAGGCAGTAAATTC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCCTTGTAGTAGCTGCTaGGCCTTAGAACTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSPCSSC*ALELAP
Trigger: TGGAGCTAGTTCTAAGGCCCAGCAGCTACTACAAGG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCTGGCGTGATACTCTaGCAGCAATTAGCTGCAATT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSGVIL*QQLAAI
Trigger: AATTGCAGCTAATTGCTGCCAGAGTATCACGCCAGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAAATTCTCCTCATGCTaGAAGTTGTCCACTAGGCGT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNKFSSC*KLSTRR
Trigger: ACGCCTAGTGGACAACTTCCAGCATGAGGAGAATTT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACTAAAGTTGGACAGTTaGAACACATCAGAGAAAACA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLKLDS*NTSEKT
Trigger: TGTTTTCTCTGATGTGTTCCAACTGTCCAACTTTAG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTAAAGTTGGACAGTTaGAACACATCAGAGAAAACA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLKLDS*NTSEKT
Trigger: TGTTTTCTCTGATGTGTTCCAACTGTCCAACTTTAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATCCTGACAACTTCCATTaGAGGCACCACACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYPDNFH*RHHTGE
Trigger: TTCTCCTGTGTGGTGCCTCCAATGGAAGTTGTCAGG...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCTCTTGAGGGCTTCGTaGAACAAGATCAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMLLRAS*NKINLF
Trigger: GAACAGATTGATCTTGTTCCACGAAGCCCTCAAGAG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTTCCCTTCTTCAACATaGTATCAACTGCAAAAATGC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGFPSST*YQLQKC
Trigger: GCATTTTTGCAGTTGATACCATGTTGAAGAAGGGAA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGACTATCTTCAGGTCTTaGCTTGACAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMTIFRS*LDSMEA
Trigger: TGCTTCCATGCTGTCAAGCCAAGACCTGAAGATAGT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCCTTCCCCATGTTTTTaGATTCAAGCTTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNPSPCF*IQACQE
Trigger: TTCCTGGCAAGCTTGAATCCAAAAACATGGGGAAGG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGGAAATTGTTCCATCTaGCTGAGGCAGTTGTTCATC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRGNCSI*LRQLFI
Trigger: GATGAACAACTGCCTCAGCCAGATGGAACAATTTCC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCAAGGTATCTCTCGATaGCTTGTACCAAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLQGISR*LVPKPE
Trigger: CTCTGGCTTTGGTACAAGCCATCGAGAGATACCTTG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCGTTGGAGCTGTTTaGGCTCTTCCTCTTTTACCA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCFVGAV*ALPLLP
Trigger: TGGTAAAAGAGGAAGAGCCCAAACAGCTCCAACGAA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTGTTATATTTTCAGGTaGTGTGGGAATGAGGTAAAC +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGCYIFR*CGNEVN
Trigger: GTTTACCTCATTCCCACACCACCTGAAAATATAACA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATTCTTGGCTCCCTTTTaGATTGCTAAGAGTTACTTC +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLFLAPF*IAKSYF
Trigger: GAAGTAACTCTTAGCAATCCAAAAGGGAGCCAAGAA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTACTTGGTCCCTTCTTaGCTCCCTTTTGGATTGCTA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMYLVPS*LPFGLL
Trigger: TAGCAATCCAAAAGGGAGCCAAGAAGGGACCAAGTA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGGTGATAAACTGATCTaGCTACAACTGGGTCGATGT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAGDKLI*LQLGRC
Trigger: ACATCGACCCAGTTGTAGCCAGATCAGTTTATCACC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGGTGATAAACTGATCTaGCTACAACTGGGTCGATGT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCGDKLI*LQLGRC
Trigger: ACATCGACCCAGTTGTAGCCAGATCAGTTTATCACC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGGTGATAAACTGATCTaGCTACAACTGGGTCGATGT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNGDKLI*LQLGRC
Trigger: ACATCGACCCAGTTGTAGCCAGATCAGTTTATCACC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAGACTCTCTTTGGTCTaGGATTTATCTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLRLSLV*DLSCSS
Trigger: ACTTGAACAAGATAAATCCCAGACCAAAGAGAGTCT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTAGACTCTCTTTGGTCTaGGATTTATCTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVRLSLV*DLSCSS
Trigger: ACTTGAACAAGATAAATCCCAGACCAAAGAGAGTCT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGCAGACTTAGCTAGATaGATACACACAGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAADLAR*IHTAQN
Trigger: ATTCTGGGCTGTGTGTATCCATCTAGCTAAGTCTGC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGCCAGGGCTGCAACATaGATAAAATGTCAAGTACAG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMARAAT*IKCQVQ
Trigger: CTGTACTTGACATTTTATCCATGTTGCAGCCCTGGC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTATACTTTTTCCCTCTaGTGCAATAAGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRYTFSL*CNKASA
Trigger: GGCAGAGGCCTTATTGCACCAGAGGGAAAAAGTATA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTATACTTTTTCCCTCTaGTGCAATAAGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNYTFSL*CNKASA
Trigger: GGCAGAGGCCTTATTGCACCAGAGGGAAAAAGTATA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGGTTTCTGCTGGGTTTaGCTAAGGCATCTAAAACTC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMGFCWV*LRHLKL
Trigger: GAGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGTGGATCTAATTTCTTaGATACTGAAGTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLVDLIS*ILKLVL
Trigger: GAGCACCAACTTCAGTATCCAAGAAATTAGATCCAC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCGACAGTCCTCAGTGTaGAAAATCAAGAGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGARQSSV*KIKSCG
Trigger: TCCACAACTCTTGATTTTCCACACTGAGGACTGTCG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCGACAGTCCTCAGTGTaGAAAATCAAGAGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRQSSV*KIKSCG
Trigger: TCCACAACTCTTGATTTTCCACACTGAGGACTGTCG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCCTCCAAAAAGGATTTaGCATATGAATGCACTTTTA +
Preference number: 4 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGPPKRI*HMNALL
Trigger: TAAAAGTGCATTCATATGCCAAATCCTTTTTGGAGG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAAACTCGTCCCAGAGTaGACAAGCTTATCTCATCCT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCKLVPE*TSLSHP
Trigger: AGGATGAGATAAGCTTGTCCACTCTGGGACGAGTTT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTTGGCACCTCTCTCTTaGAGGGACATACCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSLAPLS*RDIPFL
Trigger: TAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTTGGCACCTCTCTCTTaGAGGGACATACCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYLAPLS*RDIPFL
Trigger: TAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGGCTTATTTGTTTCTaGGGGAGATTCAGTATGCTG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMWLICF*GRFSML
Trigger: CAGCATACTGAATCTCCCTCAGAAACAAATAAGCCA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATCAGAAGAAGAATCAGTaGTGGTGCTACACCCAGCTT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYQKKNQ*WCYTQL
Trigger: AAGCTGGGTGTAGCACCATCACTGATTCTTCTTCTG...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAGTTCATACAACTCTTaGGGGCTTCGTGGAACAAGA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLSSYNS*GLRGTR
Trigger: TCTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAAAATTTCTGCCATCTaGAGTGCTCCCACTACTATC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRKISAI*SAPTTI
Trigger: GATAGTAGTGGGAGCACTTCAGATGGCAGAAATTTT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTCACTTAATCGACCTTaGGGGCTGAGATCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRSLNRP*GLRSKE
Trigger: TTCTTTAGATCTCAGCCCTCAAGGTCGATTAAGTGA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTGGGGCTTTTAGCTTaGTTGTCTACTTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCVGLLA*LSTLSS
Trigger: TGATGACAAAGTAGACAATCAAGCTAAAAGCCCCAC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGTGGGGCTTTTAGCTTaGTTGTCTACTTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMVGLLA*LSTLSS
Trigger: TGATGACAAAGTAGACAATCAAGCTAAAAGCCCCAC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGAAATCGCTTTAATCTaGTCTCTCTGCTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNEIALI*SLCSQH
Trigger: ATGCTGTGAGCAGAGAGATCAGATTAAAGCGATTTC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGAGAATCAGACTGGTTaGTTTCTGGGTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCENQTG*FLGWYQ
Trigger: TTGATACCAACCCAGAAATCAACCAGTCTGATTCTC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGAGAATCAGACTGGTTaGTTTCTGGGTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMENQTG*FLGWYQ
Trigger: TTGATACCAACCCAGAAATCAACCAGTCTGATTCTC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGCAACTCTGCTATCTTaGGAATCAGACTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMATLLS*ESDWLI
Trigger: AATCAACCAGTCTGATTCTCAAGATAGCAGAGTTGC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACACTGAGTGGGAAGACTaGTTCAAATCCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNTEWED*FKSISE
Trigger: TTCAGAGATGGATTTGAATCAGTCTTCCCACTCAGT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTATCTGGGTTTTCTGTTaGTTCAAACGTCTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRIWVFC*FKRLSD
Trigger: GTCCGAAAGACGTTTGAATCAACAGAAAACCCAGAT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCTGCATTTCTTGCTATaGTCAGGAAAGATGGAACGA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRLHFLL*SGKMER
Trigger: TCGTTCCATCTTTCCTGATCATAGCAAGAAATGCAG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCTGCATTTCTTGCTATaGTCAGGAAAGATGGAACGA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMLHFLL*SGKMER
Trigger: TCGTTCCATCTTTCCTGATCATAGCAAGAAATGCAG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCTGCATTTCTTGCTATaGTCAGGAAAGATGGAACGA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCLHFLL*SGKMER
Trigger: TCGTTCCATCTTTCCTGATCATAGCAAGAAATGCAG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAAAAATCAGAGGAAAGTaGAAAGCACATAGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLKIRGK*KAHRAS
Trigger: ACTAGCTCTATGTGCTTTTCACTTTCCTCTGATTTT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAGGAAGCATCTTCAGTaGTTTGTCACTAGGTTATCC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRKHLQ*FVTRLS
Trigger: GGATAACCTAGTGACAAATCACTGAAGATGCTTCCT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAGAAAGGTGTCCCCTTaGCAGTTCAGAAGTAGTATT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRRKVSP*QFRSSI
Trigger: AATACTACTTCTGAACTGTCAAGGGGACACCTTTCT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAGAAAGGTGTCCCCTTaGCAGTTCAGAAGTAGTATT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRKVSP*QFRSSI
Trigger: AATACTACTTCTGAACTGTCAAGGGGACACCTTTCT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGCAGATTTCAGTTGTTaGTCCTGGTCTAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRADFSC*SWSKCL
Trigger: GAGACATTTAGACCAGGAGCAACAACTGAAATCTGC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGCAGATTTCAGTTGTTaGTCCTGGTCTAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMADFSC*SWSKCL
Trigger: GAGACATTTAGACCAGGAGCAACAACTGAAATCTGC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCTTTCATCACTGGCTTaGAATCCTTGTAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLLSSLA*NPCSSC
Trigger: GCAGCTACTACAAGGATTGCAAGCCAGTGATGAAAG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAGTAAATTCTCCTCATaGTGGAAGTTGTCCACTAGG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSKFSS*WKLSTR
Trigger: CCTAGTGGACAACTTCCAGCATGAGGAGAATTTACT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAGTAAATTCTCCTCATaGTGGAAGTTGTCCACTAGG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRSKFSS*WKLSTR
Trigger: CCTAGTGGACAACTTCCAGCATGAGGAGAATTTACT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTCTTTGGAAGCAACCTaGTGGAGTAAATTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRSLEAT*WSKFSS
Trigger: TGAGGAGAATTTACTCCAGCAGGTTGCTTCCAAAGA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTCTTTGGAAGCAACCTaGTGGAGTAAATTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCSLEAT*WSKFSS
Trigger: TGAGGAGAATTTACTCCAGCAGGTTGCTTCCAAAGA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATATCCTGTTATATGGATaGCAGAGGCCCCGATCATCA +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYILLYG*QRPRSS
Trigger: TGATGATCGGGGCCTCTGGCATCCATATAACAGGAT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCTCTTTCATAAGCTGTaGTCGAGCATCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNLFHKL*SSIILL
Trigger: AAGAAGGATGATGCTCGAGCACAGCTTATGAAAGAG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCTGGCTCAATGTTGTTaGTGTTGGACTGTGTACTTA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMLAQCC*CWTVYL
Trigger: TAAGTACACAGTCCAACAGCAACAACATTGAGCCAG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTACAAATTTATGTGCCTaGTCCTTAATCCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGTNLCA*SLIQPL
Trigger: TAAAGGTTGGATTAAGGAGCAGGCACATAAATTTGT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCATTCAATGCAGGGTTaGTTCCATCCATATTCTCAG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNHSMQG*FHPYSQ
Trigger: CTGAGAATATGGATGGAAGCAACCCTGCATTGAATG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTACTAAACTGCCGTACTaGCTGATACACAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRTKLPY*LIHSHV
Trigger: AACATGACTGTGTATCAGGCAGTACGGCAGTTTAGT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTCCAAATACCAGCTCTaGCTAGAGGATTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLSKYQL*LEDCSH
Trigger: ATGAGAGCAATCCTCTAGGCAGAGCTGGTATTTGGA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGTATCAAGTAATCTTTaGATTGCTCGGTCCCGATCA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMVSSNL*IARSRS
Trigger: TGATCGGGACCGAGCAATGCAAAGATTACTTGATAC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGTATCAAGTAATCTTTaGATTGCTCGGTCCCGATCA +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAVSSNL*IARSRS
Trigger: TGATCGGGACCGAGCAATGCAAAGATTACTTGATAC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGATATGAGCTGGCTTTaGTGTCCTACCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYDMSWL*CPTKGK
Trigger: CTTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCATCAGTGTCTTTaGATCCCAAGTGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCFHQCL*IPSVCF
Trigger: AAAGCAGACACTTGGGATGCAAAGACACTGATGGAA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAGAAATAACCTCTGCTaGTCATTATCAAAACTACTG +
Preference number: 4 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGRNNLC*SLSKLL
Trigger: CAGTAGTTTTGATAATGAGCAGCAGAGGTTATTTCT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTATGGAGAAATAACCTCTaGTGCTCATTATCAAAACTA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLWRNNL*CSLSKL
Trigger: TAGTTTTGATAATGAGCAGCAGAGGTTATTTCTCCA...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGTAACAGGCAGACACTaGATTTCTTGCTATGATCAG +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAVTGRH*ISCYDQ
Trigger: CTGATCATAGCAAGAAATGCAGTGTCTGCCTGTTAC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTCCAGAGGCTGTTGCTaGTGGAATTGCCATGTAAAC +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSSRGCC*WNCHVN
Trigger: GTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTCCAGAGGCTGTTGCTaGTGGAATTGCCATGTAAAC +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYSRGCC*WNCHVN
Trigger: GTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTACAGGTGCTTTTATCTaGGTCGAGACAAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLTGAFI*VETKAE
Trigger: TTCAGCCTTTGTCTCGACGCAGATAAAAGCACCTGT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAGCATTGCTTACAGGTaGTTTTATCTGCGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLSIAYR*FYLRRD
Trigger: GTCTCGACGCAGATAAAAGCACCTGTAAGCAATGCT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCTAAAACTCCGTGTCTaGTCCCAATTAGTCTACCTA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCLKLRV*SQLVYL
Trigger: TAGGTAGACTAATTGGGAGCAGACACGGAGTTTTAG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGTAGGATGTATAGGATaGCCTAGGGAAGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYVGCIG*PREVTP
Trigger: TGGAGTGACTTCCCTAGGGCATCCTATACATCCTAC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTGTTGTCACTGGAGCTaGTTCCTAGTTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLCCHWS*FLVSIS
Trigger: GGAAATGGAAACTAGGAAGCAGCTCCAGTGACAACA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675423.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGTCTTTCTGAAGTATTaGCTCTGTCTGGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLVFLKY*LCLDPL
Trigger: CAGAGGATCCAGACAGAGCCAATACTTCAGAAAGAC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATTCAGTTGTTGCTCCTaGTCTAAATGTCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLFSCCS*SKCLFF
Trigger: AAAGAAGAGACATTTAGACCAGGAGCAACAACTGAA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCTTGGCTTGACAGCATaGAAGCAATGTGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCLGLTA*KQCDLK
Trigger: TTTCAAGTCACATTGCTTCCATGCTGTCAAGCCAAG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATGTTATATTTTCAGGTaGTGTGGGAATGAGGTAAAC +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLCYIFR*CGNEVN
Trigger: GTTTACCTCATTCCCACACCACCTGAAAATATAACA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCTCAGTAAGCCATGTTaGGATGTTTCCTGTCATGAT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCLSKPC*DVSCHD
Trigger: ATCATGACAGGAAACATCCCAACATGGCTTACTGAG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCTCAGTAAGCCATGTTaGGATGTTTCCTGTCATGAT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRLSKPC*DVSCHD
Trigger: ATCATGACAGGAAACATCCCAACATGGCTTACTGAG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGATATTGGGAAACCCTaGCAGAGTGAAATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYDIGKP*QSEIQS
Trigger: GGACTGGATTTCACTCTGCCAGGGTTTCCCAATATC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATACTCCTCTAAATTGTaGATAGTGACTGGTATATCC +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLYSSKL*IVTGIS
Trigger: GGATATACCAGTCACTATCCACAATTTAGAGGAGTA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCTACCAGTCACAAACTaGAGAAATAACCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLLPVTN*RNNLCC
Trigger: GCAGCAGAGGTTATTTCTCCAGTTTGTGACTGGTAG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGACAATTGTCAAAGGTaGATTCAAACTCCGGAATCC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRDNCQR*IQTPES
Trigger: GGATTCCGGAGTTTGAATCCACCTTTGACAATTGTC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTATGATCAGGAAAGATaGAACGACTGCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLYDQER*NDCCPS
Trigger: AGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCATA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGCAGACTTAGCTAGATaGATACACACAGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLADLAR*IHTAQN
Trigger: ATTCTGGGCTGTGTGTATCCATCTAGCTAAGTCTGC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAGGGGAAGAGGAGCGTaGAATAAAGAAGACTATGAA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRGRGA*NKEDYE
Trigger: TTCATAGTCTTCTTTATTCCACGCTCCTCTTCCCCT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGTGAAAGGTTTCTGCTaGGTTTGGCTAAGGCATCTA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLVKGFC*VWLRHL
Trigger: TAGATGCCTTAGCCAAACCCAGCAGAAACCTTTCAC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGTTTCTTACGATGAGTaGCTGTGTGAAAGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRVSYDE*LCERFL
Trigger: CAGAAACCTTTCACACAGCCACTCATCGTAAGAAAC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTTTCTTACGATGAGTaGCTGTGTGAAAGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCVSYDE*LCERFL
Trigger: CAGAAACCTTTCACACAGCCACTCATCGTAAGAAAC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACCTCCAAAAAGGATTTaGCATATGAATGCACTTTTA +
Preference number: 4 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLPPKRI*HMNALL
Trigger: TAAAAGTGCATTCATATGCCAAATCCTTTTTGGAGG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAAACTCGTCCCAGAGTaGACAAGCTTATCTCATCCT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLKLVPE*TSLSHP
Trigger: AGGATGAGATAAGCTTGTCCACTCTGGGACGAGTTT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTAGCCCAATCAAATTTTaGAGAGCCACCAGTTTTACT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGASPIKF*RATSFT
Trigger: AGTAAAACTGGTGGCTCTTCAAAATTTGATTGGGCT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGCCACATCAATACACTaGATAACTTGCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNATSIH*ITCSFS
Trigger: AGAAAAGCTGCAAGTTATTCAGTGTATTGATGTGGC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTTTGGGCATTTATGCTaGAGAATTCTAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNFGHLC*RILGTA
Trigger: TGCTGTACCTAGAATTCTTCAGCATAAATGCCCAAA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTTTGGGCATTTATGCTaGAGAATTCTAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRFGHLC*RILGTA
Trigger: TGCTGTACCTAGAATTCTTCAGCATAAATGCCCAAA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTGGGCATTTATGCTaGAGAATTCTAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMFGHLC*RILGTA
Trigger: TGCTGTACCTAGAATTCTTCAGCATAAATGCCCAAA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGAATCTGCCACAAAATaGAATTCATCTGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNESATK*NSSGVI
Trigger: TATCACGCCAGATGAATTTCATTTTGTGGCAGATTC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTACTGACTTTTTATCCTaGTGTGTTAGCCTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCTDFLS*CVSLWV
Trigger: AACCCAAAGGCTAACACATCAGGATAAAAAGTCAGT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGCAAGTGCTTTCTACTaGCTTTTTATCCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMASAFY*LFILMC
Trigger: ACACATCAGGATAAAAAGTCAGTAGAAAGCACTTGC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGCAAGTGCTTTCTACTaGCTTTTTATCCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNASAFY*LFILMC
Trigger: ACACATCAGGATAAAAAGTCAGTAGAAAGCACTTGC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTACTACCAACAGCTGTTaGACATTTGTAAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCTTNSC*TFVSRS
Trigger: AGATCTGCTTACAAATGTTCAACAGCTGTTGGTAGT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCCACACAGGAGAAAGTaGAGCGTTTCTGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSPHRRK*SVSAMF
Trigger: AAACATTGCAGAAACGCTTCACTTTCTCCTGTGTGG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGAAGATTTAGGTGACTaGGTAGTGGTGGGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSEDLGD*VVVGLL
Trigger: TAAAAGCCCCACCACTACTCAGTCACCTAAATCTTC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGAAATCGCTTTAATCTaGTCTCTCTGCTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLEIALI*SLCSQH
Trigger: ATGCTGTGAGCAGAGAGATCAGATTAAAGCGATTTC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCAGTTGTTCATCTTGTaGACTAATGCCAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNQLFIL*TNANKG
Trigger: ACCTTTGTTGGCATTAGTTCACAAGATGAACAACTG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCAGTTGTTCATCTTGTaGACTAATGCCAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMQLFIL*TNANKG
Trigger: ACCTTTGTTGGCATTAGTTCACAAGATGAACAACTG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATAACTGCCGTACTGCCTaGTACACAGTCATGTTATAC +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYNCRTA*YTVMLY
Trigger: GTATAACATGACTGTGTATCAGGCAGTACGGCAGTT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGCAACTCTGCTATCTTaGGAATCAGACTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLATLLS*ESDWLI
Trigger: AATCAACCAGTCTGATTCTCAAGATAGCAGAGTTGC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTTAACCTTTGCGATATaGGCTGGCTTTGCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYLTFAI*AGFAVL
Trigger: TAGGACAGCAAAGCCAGCTCATATCGCAAAGGTTAA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTTAACCTTTGCGATATaGGCTGGCTTTGCTGTCCTA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSLTFAI*AGFAVL
Trigger: TAGGACAGCAAAGCCAGCTCATATCGCAAAGGTTAA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTACTGAGTGGGAAGACTaGTTCAAATCCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLTEWED*FKSISE
Trigger: TTCAGAGATGGATTTGAATCAGTCTTCCCACTCAGT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTATCTGGGTTTTCTGTTaGTTCAAACGTCTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLIWVFC*FKRLSD
Trigger: GTCCGAAAGACGTTTGAATCAACAGAAAACCCAGAT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCATTATCTCAATGCTTaGATAGTCCGGCAACTTAAG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMHYLNA*IVRQLK
Trigger: CTTAAGTTGCCGGACTATTCAAGCATTGAGATAATG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCATTATCTCAATGCTTaGATAGTCCGGCAACTTAAG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRHYLNA*IVRQLK
Trigger: CTTAAGTTGCCGGACTATTCAAGCATTGAGATAATG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAAAGGTCCCGTGTATTaGAGGAGGAATAAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLKGPVY*RRNKLK
Trigger: CTTTAGCTTATTCCTCCTTCAATACACGGGACCTTT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAGGAAGCATCTTCAGTaGTTTGTCACTAGGTTATCC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLRKHLQ*FVTRLS
Trigger: GGATAACCTAGTGACAAATCACTGAAGATGCTTCCT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCTTTCATCACTGGCTTaGAATCCTTGTAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSLSSLA*NPCSSC
Trigger: GCAGCTACTACAAGGATTGCAAGCCAGTGATGAAAG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGACACATCTCAATAACTaGCTGAAGCTGTTGACTTTC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMTHLNN*LKLLTF
Trigger: GAAAGTCAACAGCTTCAGGCAGTTATTGAGATGTGT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACACACATCTCAATAACTaGCTGAAGCTGTTGACTTTC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNTHLNN*LKLLTF
Trigger: GAAAGTCAACAGCTTCAGGCAGTTATTGAGATGTGT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTCTTTGGAAGCAACCTaGTGGAGTAAATTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLSLEAT*WSKFSS
Trigger: TGAGGAGAATTTACTCCAGCAGGTTGCTTCCAAAGA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCTCTTTCATAAGCTGTaGTCGAGCATCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLLFHKL*SSIILL
Trigger: AAGAAGGATGATGCTCGAGCACAGCTTATGAAAGAG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCTGGCTCAATGTTGTTaGTGTTGGACTGTGTACTTA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLLAQCC*CWTVYL
Trigger: TAAGTACACAGTCCAACAGCAACAACATTGAGCCAG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCATTCAATGCAGGGTTaGTTCCATCCATATTCTCAG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLHSMQG*FHPYSQ
Trigger: CTGAGAATATGGATGGAAGCAACCCTGCATTGAATG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTACTAAACTGCCGTACTaGCTGATACACAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLTKLPY*LIHSHV
Trigger: AACATGACTGTGTATCAGGCAGTACGGCAGTTTAGT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCTATCCAATCTAGGTaGAACTCTGCTATCTTGAGA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSIQSR*NSAILR
Trigger: TCTCAAGATAGCAGAGTTGCACCTAGATTGGATAGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTCTATCCAATCTAGGTaGAACTCTGCTATCTTGAGA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRSIQSR*NSAILR
Trigger: TCTCAAGATAGCAGAGTTGCACCTAGATTGGATAGA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAAGAAATAACCTCTGCTaGTCATTATCAAAACTACTG +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLRNNLC*SLSKLL
Trigger: CAGTAGTTTTGATAATGAGCAGCAGAGGTTATTTCT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGAGACACTGCATTTCTTaGTATGATCAGGAAAGATGG +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMRHCIS*YDQERW
Trigger: CCATCTTTCCTGATCATAGCAAGAAATGCAGTGTCT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATACAGGTGCTTTTATCTaGGTCGAGACAAAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYTGAFI*VETKAE
Trigger: TTCAGCCTTTGTCTCGACGCAGATAAAAGCACCTGT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTATGACTGGACAGCATTaGTTACAGGTGCTTTTATCT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAMTGQH*LQVLLS
Trigger: AGATAAAAGCACCTGTAAGCAATGCTGTCCAGTCAT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCAAATTTGCCAGGGCTaGAACATGGATAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCQICQG*NMDKMS
Trigger: TGACATTTTATCCATGTTGCAGCCCTGGCAAATTTG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCAAATTTGCCAGGGCTaGAACATGGATAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRQICQG*NMDKMS
Trigger: TGACATTTTATCCATGTTGCAGCCCTGGCAAATTTG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGAAGTAGTATTAGACTaGACTTTGGGTGCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNEVVLD*TLGALE
Trigger: TTCTAAGGCACCCAAAGTGCAGTCTAATACTACTTC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGAAGTAGTATTAGACTaGACTTTGGGTGCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMEVVLD*TLGALE
Trigger: TTCTAAGGCACCCAAAGTGCAGTCTAATACTACTTC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCTTCCAATTGTTCTATaGAAAAGCTGTGACATCCGA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMLPIVL*KSCDIR
Trigger: TCGGATGTCACAGCTTTTCCATAGAACAATTGGAAG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCTTCCAATTGTTCTATaGAAAAGCTGTGACATCCGA +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGALPIVL*KSCDIR
Trigger: TCGGATGTCACAGCTTTTCCATAGAACAATTGGAAG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGTTGACTTTCATCACTaGCTTGCAATCCTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMVDFHH*LAILVV
Trigger: TACTACAAGGATTGCAAGCCAGTGATGAAAGTCAAC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTTGACTTTCATCACTaGCTTGCAATCCTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCVDFHH*LAILVV
Trigger: TACTACAAGGATTGCAAGCCAGTGATGAAAGTCAAC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAAAGGCTCGACAAGCATaGTTCATAATATCAAAATTG +
Preference number: 4 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLKARQA*FIISKL
Trigger: CAATTTTGATATTATGAACCATGCTTGTCGAGCCTT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGAAAATGAAATTCATCTaGCGTGATACTCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMKMKFI*RDTLAA
Trigger: TGCTGCCAGAGTATCACGCCAGATGAATTTCATTTT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAAAATGAAATTCATCTaGCGTGATACTCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNKMKFI*RDTLAA
Trigger: TGCTGCCAGAGTATCACGCCAGATGAATTTCATTTT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATAAATTCTCCTCATGCTaGAAGTTGTCCACTAGGCGT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYKFSSC*KLSTRR
Trigger: ACGCCTAGTGGACAACTTCCAGCATGAGGAGAATTT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTTGGAAGCAACCTGCTaGAGTAAATTCTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYLEATC*SKFSSC
Trigger: GCATGAGGAGAATTTACTCCAGCAGGTTGCTTCCAA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTACTATCTTCAGGTCTTaGCTTGACAGCATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSTIFRS*LDSMEA
Trigger: TGCTTCCATGCTGTCAAGCCAAGACCTGAAGATAGT...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTATTCGTACATGCCTTTaGTGGACTTGTCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRIRTCL*WTCQQR
Trigger: TCTTTGTTGACAAGTCCACCAAAGGCATGTACGAAT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGATTCGTACATGCCTTTaGTGGACTTGTCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMIRTCL*WTCQQR
Trigger: TCTTTGTTGACAAGTCCACCAAAGGCATGTACGAAT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTATTCGTACATGCCTTTaGTGGACTTGTCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCIRTCL*WTCQQR
Trigger: TCTTTGTTGACAAGTCCACCAAAGGCATGTACGAAT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCCTTCCCCATGTTTTTaGATTCAAGCTTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSPSPCF*IQACQE
Trigger: TTCCTGGCAAGCTTGAATCCAAAAACATGGGGAAGG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCAATGTTGTTGCTGTTaGACTGTGTACTTAACCTTC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCQCCCC*TVYLTF
Trigger: GAAGGTTAAGTACACAGTCCAACAGCAACAACATTG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCAATGTTGTTGCTGTTaGACTGTGTACTTAACCTTC +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNQCCCC*TVYLTF
Trigger: GAAGGTTAAGTACACAGTCCAACAGCAACAACATTG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTTCGTTGGAGCTGTTTaGGCTCTTCCTCTTTTACCA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSFVGAV*ALPLLP
Trigger: TGGTAAAAGAGGAAGAGCCCAAACAGCTCCAACGAA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTTCTTGGCTCCCTTTTaGATTGCTAAGAGTTACTTC +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRFLAPF*IAKSYF
Trigger: GAAGTAACTCTTAGCAATCCAAAAGGGAGCCAAGAA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGGTGATAAACTGATCTaGCTACAACTGGGTCGATGT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYGDKLI*LQLGRC
Trigger: ACATCGACCCAGTTGTAGCCAGATCAGTTTATCACC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTATTGTGGATAGTGACTaGTATATCCTTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAIVDSD*YILPSF
Trigger: AAAGGAGGGAAGGATATACCAGTCACTATCCACAAT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATTGTGGATAGTGACTaGTATATCCTTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNIVDSD*YILPSF
Trigger: AAAGGAGGGAAGGATATACCAGTCACTATCCACAAT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACAATTGTCAAAGGTaGATTCAAACTCCGGAATCC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLDNCQR*IQTPES
Trigger: GGATTCCGGAGTTTGAATCCACCTTTGACAATTGTC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTATGATCAGGAAAGATaGAACGACTGCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYYDQER*NDCCPS
Trigger: AGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCATA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAGCCCAATCAAATTTTaGAGAGCCACCAGTTTTACT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLSPIKF*RATSFT
Trigger: AGTAAAACTGGTGGCTCTTCAAAATTTGATTGGGCT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAAATTGTGCTCCATCTaGAGTAACGTAATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCKLCSI*SNVIKA
Trigger: AGCTTTGATTACGTTACTTCAGATGGAGCACAATTT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGAAATTGTGCTCCATCTaGAGTAACGTAATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMKLCSI*SNVIKA
Trigger: AGCTTTGATTACGTTACTTCAGATGGAGCACAATTT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTAAAATTTCTGCCATCTaGAGTGCTCCCACTACTATC +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSKISAI*SAPTTI
Trigger: GATAGTAGTGGGAGCACTTCAGATGGCAGAAATTTT...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGCTAAGTGTTTTACTTaGTGCATTACACCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRAKCFT*CITPSL
Trigger: AAGAGAAGGTGTAATGCATCAAGTAAAACACTTAGC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGCTAAGTGTTTTACTTaGTGCATTACACCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCAKCFT*CITPSL
Trigger: AAGAGAAGGTGTAATGCATCAAGTAAAACACTTAGC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTCACTTAATCGACCTTaGGGGCTGAGATCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSSLNRP*GLRSKE
Trigger: TTCTTTAGATCTCAGCCCTCAAGGTCGATTAAGTGA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGAAATCGCTTTAATCTaGTCTCTCTGCTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYEIALI*SLCSQH
Trigger: ATGCTGTGAGCAGAGAGATCAGATTAAAGCGATTTC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGGAAATCATGTACTTTaGCTGGAAATTGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNGNHVL*LEIVPS
Trigger: AGATGGAACAATTTCCAGTCAAAGTACATGATTTCC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGGAAATCATGTACTTTaGCTGGAAATTGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRGNHVL*LEIVPS
Trigger: AGATGGAACAATTTCCAGTCAAAGTACATGATTTCC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGGATGTTTCCTGTCATaGTTACTAAAGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAGCFLS*LLKDLE
Trigger: TTCAAGATCCTTTAGTAATCATGACAGGAAACATCC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGAGAATCAGACTGGTTaGTTTCTGGGTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSENQTG*FLGWYQ
Trigger: TTGATACCAACCCAGAAATCAACCAGTCTGATTCTC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGCAACTCTGCTATCTTaGGAATCAGACTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSATLLS*ESDWLI
Trigger: AATCAACCAGTCTGATTCTCAAGATAGCAGAGTTGC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGTCTTTTCTTCTGTCTaGCAATGTCTTCTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLVFSSV*QCLLGD
Trigger: ATCACCTAGAAGACATTGTCAGACAGAAGAAAAGAC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATACTGAGTGGGAAGACTaGTTCAAATCCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYTEWED*FKSISE
Trigger: TTCAGAGATGGATTTGAATCAGTCTTCCCACTCAGT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTACTGAGTGGGAAGACTaGTTCAAATCCATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSTEWED*FKSISE
Trigger: TTCAGAGATGGATTTGAATCAGTCTTCCCACTCAGT...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAAAATCAGAGGAAAGTaGAAAGCACATAGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNKIRGK*KAHRAS
Trigger: ACTAGCTCTATGTGCTTTTCACTTTCCTCTGATTTT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATAAAGGTCCCGTGTATTaGAGGAGGAATAAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYKGPVY*RRNKLK
Trigger: CTTTAGCTTATTCCTCCTTCAATACACGGGACCTTT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTACACATCTCAATAACTaGCTGAAGCTGTTGACTTTC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLTHLNN*LKLLTF
Trigger: GAAAGTCAACAGCTTCAGGCAGTTATTGAGATGTGT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTCTTTGGAAGCAACCTaGTGGAGTAAATTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYSLEAT*WSKFSS
Trigger: TGAGGAGAATTTACTCCAGCAGGTTGCTTCCAAAGA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTACCATCTGTGTTCTGTaGATTTCCCTTCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLTICVL*ISLLQH
Trigger: ATGTTGAAGAAGGGAAATGCACAGAACACAGATGGT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATACTAAACTGCCGTACTaGCTGATACACAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYTKLPY*LIHSHV
Trigger: AACATGACTGTGTATCAGGCAGTACGGCAGTTTAGT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTTCCATCAGTGTCTTTaGATCCCAAGTGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYFHQCL*IPSVCF
Trigger: AAAGCAGACACTTGGGATGCAAAGACACTGATGGAA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAGACACTGCATTTCTTaGTATGATCAGGAAAGATGG +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLRHCIS*YDQERW
Trigger: CCATCTTTCCTGATCATAGCAAGAAATGCAGTGTCT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGTAACAGGCAGACACTaGATTTCTTGCTATGATCAG +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYVTGRH*ISCYDQ
Trigger: CTGATCATAGCAAGAAATGCAGTGTCTGCCTGTTAC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGAGACTGCACTTTGGGTaGCTTAGAATTAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMRLHFG*LRIRFS
Trigger: AGAAAATCTAATTCTAAGGCACCCAAAGTGCAGTCT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTTCAGTTGTTGCTCCTaGTCTAAATGTCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRFSCCS*SKCLFF
Trigger: AAAGAAGAGACATTTAGACCAGGAGCAACAACTGAA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTTCAGTTGTTGCTCCTaGTCTAAATGTCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNFSCCS*SKCLFF
Trigger: AAAGAAGAGACATTTAGACCAGGAGCAACAACTGAA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTTCAGTTGTTGCTCCTaGTCTAAATGTCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAFSCCS*SKCLFF
Trigger: AAAGAAGAGACATTTAGACCAGGAGCAACAACTGAA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTAAACTTGCTAATTTaGCCTGTAATCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCLNLLI*PVIQKV
Trigger: GACCTTCTGGATTACAGGCCAAATTAGCAAGTTTAA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTTAAACTTGCTAATTTaGCCTGTAATCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGALNLLI*PVIQKV
Trigger: GACCTTCTGGATTACAGGCCAAATTAGCAAGTTTAA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTCCCTTCTTCAACATaGTATCAACTGCAAAAATGC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMFPSST*YQLQKC
Trigger: GCATTTTTGCAGTTGATACCATGTTGAAGAAGGGAA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTATCATGTACTTTGACTaGAAATTGTTCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCIMYFD*KLFHLA
Trigger: AGCCAGATGGAACAATTTCCAGTCAAAGTACATGAT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTATCATGTACTTTGACTaGAAATTGTTCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRIMYFD*KLFHLA
Trigger: AGCCAGATGGAACAATTTCCAGTCAAAGTACATGAT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATCATGTACTTTGACTaGAAATTGTTCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNIMYFD*KLFHLA
Trigger: AGCCAGATGGAACAATTTCCAGTCAAAGTACATGAT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTTATATTTTCAGGTaGTGTGGGAATGAGGTAAAC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMCYIFR*CGNEVN
Trigger: GTTTACCTCATTCCCACACCACCTGAAAATATAACA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTGTTATATTTTCAGGTaGTGTGGGAATGAGGTAAAC +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCCYIFR*CGNEVN
Trigger: GTTTACCTCATTCCCACACCACCTGAAAATATAACA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTTCTTGGCTCCCTTTTaGATTGCTAAGAGTTACTTC +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLFLAPF*IAKSYF
Trigger: GAAGTAACTCTTAGCAATCCAAAAGGGAGCCAAGAA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTATTGTGGATAGTGACTaGTATATCCTTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLIVDSD*YILPSF
Trigger: AAAGGAGGGAAGGATATACCAGTCACTATCCACAAT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTACTCCTCTAAATTGTaGATAGTGACTGGTATATCC +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMYSSKL*IVTGIS
Trigger: GGATATACCAGTCACTATCCACAATTTAGAGGAGTA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTACTCCTCTAAATTGTaGATAGTGACTGGTATATCC +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAYSSKL*IVTGIS
Trigger: GGATATACCAGTCACTATCCACAATTTAGAGGAGTA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATAGGGGAAGAGGAGCGTaGAATAAAGAAGACTATGAA +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYRGRGA*NKEDYE
Trigger: TTCATAGTCTTCTTTATTCCACGCTCCTCTTCCCCT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGCAAGTGCTTTCTACTaGCTTTTTATCCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYASAFY*LFILMC
Trigger: ACACATCAGGATAAAAAGTCAGTAGAAAGCACTTGC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATACTACCAACAGCTGTTaGACATTTGTAAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYTTNSC*TFVSRS
Trigger: AGATCTGCTTACAAATGTTCAACAGCTGTTGGTAGT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGGAAATCATGTACTTTaGCTGGAAATTGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLGNHVL*LEIVPS
Trigger: AGATGGAACAATTTCCAGTCAAAGTACATGATTTCC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGACAAATTTATGTGCCTaGTCCTTAATCCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMTNLCA*SLIQPL
Trigger: TAAAGGTTGGATTAAGGAGCAGGCACATAAATTTGT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTCTATCCAATCTAGGTaGAACTCTGCTATCTTGAGA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSSIQSR*NSAILR
Trigger: TCTCAAGATAGCAGAGTTGCACCTAGATTGGATAGA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCTGAACGAATCAAATTaGCTAGAAACGCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLLNESN*LETPSF
Trigger: AAATGAAGGCGTTTCTAGGCAATTTGATTCGTTCAG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAGAAATAACCTCTGCTaGTCATTATCAAAACTACTG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNRNNLC*SLSKLL
Trigger: CAGTAGTTTTGATAATGAGCAGCAGAGGTTATTTCT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAGAAATAACCTCTGCTaGTCATTATCAAAACTACTG +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRRNNLC*SLSKLL
Trigger: CAGTAGTTTTGATAATGAGCAGCAGAGGTTATTTCT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTGGAGAAATAACCTCTaGTGCTCATTATCAAAACTA +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNWRNNL*CSLSKL
Trigger: TAGTTTTGATAATGAGCAGCAGAGGTTATTTCTCCA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGGAGAAATAACCTCTaGTGCTCATTATCAAAACTA +
Preference number: 4 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMWRNNL*CSLSKL
Trigger: TAGTTTTGATAATGAGCAGCAGAGGTTATTTCTCCA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCTGATGGATTATTaGAGATTTGAGAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRNLMDY*RFEKSA
Trigger: TGCTGATTTCTCAAATCTGCAATAATCCATCAGGTT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTATTCCTTCAAATTTATaGCACAGGCCTAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLIPSNL*HRPSFG
Trigger: TCCAAAACTAGGCCTGTGGCATAAATTTGAAGGAAT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGTGTATGTCAACTACTaGAATGTCAAACCTAAGACT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLVYVNY*NVKPKT
Trigger: AGTCTTAGGTTTGACATTGCAGTAGTTGACATACAC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGGAGAAGGAAGTCAGTaGATTTATGCAATTTTACAT +
Preference number: 4 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCGEGSQ*IYAILH
Trigger: ATGTAAAATTGCATAAATGCACTGACTTCCTTCTCC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGGAGAAGGAAGTCAGTaGATTTATGCAATTTTACAT +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNGEGSQ*IYAILH
Trigger: ATGTAAAATTGCATAAATGCACTGACTTCCTTCTCC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAGACTGCACTTTGGGTaGCTTAGAATTAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLRLHFG*LRIRFS
Trigger: AGAAAATCTAATTCTAAGGCACCCAAAGTGCAGTCT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACAAGGCTCGACAAGCATaGTTCATAATATCAAAATTG +
Preference number: 4 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNKARQA*FIISKL
Trigger: CAATTTTGATATTATGAACCATGCTTGTCGAGCCTT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTATCATGTACTTTGACTaGAAATTGTTCCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLIMYFD*KLFHLA
Trigger: AGCCAGATGGAACAATTTCCAGTCAAAGTACATGAT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAGACTCTCTTTGGTCTaGGATTTATCTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLRLSLV*DLSCSS
Trigger: ACTTGAACAAGATAAATCCCAGACCAAAGAGAGTCT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGTGGATCTAATTTCTTaGATACTGAAGTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYVDLIS*ILKLVL
Trigger: GAGCACCAACTTCAGTATCCAAGAAATTAGATCCAC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCCTCCAAAAAGGATTTaGCATATGAATGCACTTTTA +
Preference number: 4 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAPPKRI*HMNALL
Trigger: TAAAAGTGCATTCATATGCCAAATCCTTTTTGGAGG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGCTAAGTGTTTTACTTaGTGCATTACACCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSAKCFT*CITPSL
Trigger: AAGAGAAGGTGTAATGCATCAAGTAAAACACTTAGC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGGATGTTTCCTGTCATaGTTACTAAAGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSGCFLS*LLKDLE
Trigger: TTCAAGATCCTTTAGTAATCATGACAGGAAACATCC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR TCA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGGATGTTTCCTGTCATaGTTACTAAAGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYGCFLS*LLKDLE
Trigger: TTCAAGATCCTTTAGTAATCATGACAGGAAACATCC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAACCTGATGGATTATTaGAGATTTGAGAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLNLMDY*RFEKSA
Trigger: TGCTGATTTCTCAAATCTGCAATAATCCATCAGGTT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGGAGAAGGAAGTCAGTaGATTTATGCAATTTTACAT +
Preference number: 4 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLGEGSQ*IYAILH
Trigger: ATGTAAAATTGCATAAATGCACTGACTTCCTTCTCC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTTAAACTTGCTAATTTaGCCTGTAATCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSLNLLI*PVIQKV
Trigger: GACCTTCTGGATTACAGGCCAAATTAGCAAGTTTAA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTAGACTCTCTTTGGTCTaGGATTTATCTTGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSRLSLV*DLSCSS
Trigger: ACTTGAACAAGATAAATCCCAGACCAAAGAGAGTCT...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTACTCCTCTAAATTGTaGATAGTGACTGGTATATCC +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSYSSKL*IVTGIS
Trigger: GGATATACCAGTCACTATCCACAATTTAGAGGAGTA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR GCA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTGGAGAAATAACCTCTaGTGCTCATTATCAAAACTA +
Preference number: 4 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSWRNNL*CSLSKL
Trigger: TAGTTTTGATAATGAGCAGCAGAGGTTATTTCTCCA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp TCTAGACACTACCATTCACCCGGTTCTGTGAAGGGCCCTCCTCATTaGGGGAAGCCGGAGGAGGGACCCAGCGACCCCTACCTCCCGCCA +
Preference number: 5 (lower is better)
Translates to: SRHYHSPGSVKGPPH*GKPEEGPSDPYLPP
Trigger: TGGCGGGAGGTAGGGGTCGCTGGGTCCCTCCTCCGGCTTCCCGCAATGAGGAGGGCCCTTCACAGAACCGGGTGAATGGTAGTGTCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430954.5
CDS CCA 90 bp CCAGAGCCTCGCCGACTGGTACTAGCACAGGAGCCCGTGGTCTTTTaGCGTGTGCTCCGCCTCAAACTGGGGAGCTCAGCAGGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: PEPRRLVLAQEPVVF*RVLRLKLGSSAGGD
Trigger: GTCTCCACCTGCTGAGCTCCCCAGTTTGAGGCGGAGCACACGCCAAAAGACCACGGGCTCCTGTGCTAGTACCAGTCGGCGAGGCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp GTTGCTTTCAGGGTCTGCCATTTTCTCCTGTCGACGAGCTTCAGCTaGTCCTCTTTTGCCCAGGCCAGAGCCTCGCCGACTGGTACTAGC +
Preference number: 5 (lower is better)
Translates to: VAFRVCHFLLSTSFS*SSFAQARASPTGTS
Trigger: GCTAGTACCAGTCGGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGAAGCTCGTCGACAGGAGAAAATGGCAGACCCTGAAAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp GTTGCTTTCAGGGTCTGCCATTTTCTCCTGTCGACGAGCTTCAGCTaGTCCTCTTTTGCCCAGGCCAGAGCCTCGCCGACTTCCTCCTAT +
Preference number: 5 (lower is better)
Translates to: VAFRVCHFLLSTSFS*SSFAQARASPTSSY
Trigger: ATAGGAGGAAGTCGGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGAAGCTCGTCGACAGGAGAAAATGGCAGACCCTGAAAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389045.7
CDS CCA 90 bp GACCTGATGGGCTGCCTCAATGATCCGGCTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATCATCACGCCACTGCCATATCGCACC +
Preference number: 5 (lower is better)
Translates to: DLMGCLNDPAVNPVI*MPEAPIITPLPYRT
Trigger: GGTGCGATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGGCAGCCCATCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389045.7
ENST00000675423.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTCAGCTGCTCCTCTTTaGCCCAGGCCAGAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSSAAPL*PRPEPR
Trigger: GCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp GTCAGCTGCAGCATGAGTGGCAGCTGTGGCTGTCCCACTGCTGACTaGAGTTGTGGATCCCATGGATCCCGATCCATTCGTACATGCCTT +
Preference number: 5 (lower is better)
Translates to: VSCSMSGSCGCPTAD*SCGSHGSRSIRTCL
Trigger: AAGGCATGTACGAATGGATCGGGATCCATGGGATCCACAACTTCAGTCAGCAGTGGGACAGCCACAGCTGCCACTCATGCTGCAGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000487178.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp CCAAGTCAGCTGCAGCATGAGTGGCAGCTGTGGCTGTCCCACTGCTaGCTGAAGTTGTGGATCCCATGGATCCCGATCCATTCGTACATG +
Preference number: 5 (lower is better)
Translates to: PSQLQHEWQLWLSHC*LKLWIPWIPIHSYM
Trigger: CATGTACGAATGGATCGGGATCCATGGGATCCACAACTTCAGTCAGCAGTGGGACAGCCACAGCTGCCACTCATGCTGCAGCTGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000487178.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 90 bp CTGATGGGCTGCTACCTCAATGATCCGGCTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATCATCACGCCACTGCCATATCGCACC +
Preference number: 5 (lower is better)
Translates to: LMGCYLNDPAVNPVI*MPEAPIITPLPYRT
Trigger: GGTGCGATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGGTAGCAGCCCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675453.1
CDS GCA 90 bp CATGCAGTGGTCCTGGGGATGTGGAAGGTCTCAAGCCATAGCGTGTaGAGCCAGAAGCAAGGTACAATCAGGCAAAGTCCTCCGTCTTCA +
Preference number: 5 (lower is better)
Translates to: HAVVLGMWKVSSHSV*SQKQGTIRQSPPSS
Trigger: TGAAGACGGAGGACTTTGCCTGATTGTACCTTGCTTCTGGCTGCACACGCTATGGCTTGAGACCTTCCACATCCCCAGGACCACTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459841.1
CDS GCA 90 bp TGGGCTGCTACCTCAATGATCCGGCTGTCAATCCTGTTATATGGATaGCAGAGGCCCCGATCATCACGCCACTGCCATATCGCACCATCT +
Preference number: 5 (lower is better)
Translates to: WAATSMIRLSILLYG*QRPRSSRHCHIAPS
Trigger: AGATGGTGCGATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGGTAGCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675453.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGGCCAGAGGGTCAATCTaGACAGGTCCACCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSARGSI*TGPPFH
Trigger: GTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGC...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp AACAGCCCCTGCAGCTCCTTGGGGAGCTTCATCTGTCCGAGCAGCTaGAGAATTTACTGCCTCCTGGTTGCTTTCAGGGTCTGCCATTTT +
Preference number: 5 (lower is better)
Translates to: NSPCSSLGSFICPSS*RIYCLLVAFRVCHF
Trigger: AAAATGGCAGACCCTGAAAGCAACCAGGAGGCAGTAAATTCTTCAGCTGCTCGGACAGATGAAGCTCCCCAAGGAGCTGCAGGGGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283943.9
CDS CCA 90 bp AAGAGCAAAGAGAAGCTAGTGCCTTGTAAAGCAGCCTTCATGCAGTaGTCCTGGGGATGTGGAAGGTCTCAAGCCATAGCGTGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: KSKEKLVPCKAAFMQ*SWGCGRSQAIACAA
Trigger: GGCTGCACACGCTATGGCTTGAGACCTTCCACATCCCCAGGACCACTGCATGAAGGCTGCTTTACAAGGCACTAGCTTCTCTTTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459841.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGGAGCCCGTGGTCTTTaGGCGTGTGCTCCGCCTCAA +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGGARGL*ACAPPQ
Trigger: TTGAGGCGGAGCACACGCCAAAAGACCACGGGCTCC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTTGGTGCTCTGTCCCTaGGCCTTCTGTGGTAGGATG +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSLVLCP*AFCGRM
Trigger: CATCCTACCACAGAAGGCCAAGGGACAGAGCACCAA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp TCCCTCTTCTGCAGCTCCTTGGGGAGCTTCATCTGTCCGAGCAGCTaGAGAATTTACTGCCTCCTGGTTGCTTTCAGGGTCTGCCATTTT +
Preference number: 5 (lower is better)
Translates to: SLFCSSLGSFICPSS*RIYCLLVAFRVCHF
Trigger: AAAATGGCAGACCCTGAAAGCAACCAGGAGGCAGTAAATTCTTCAGCTGCTCGGACAGATGAAGCTCCCCAAGGAGCTGCAGAAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409677.5
CDS CCA 90 bp TGGGGAGCTTCATCTGTCCGAGCAGCTGAAGAATTTACTGCCTCCTaGTTGCTTTCAGGGTCTGCCATTTTCTCCTGTCGACGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: WGASSVRAAEEFTAS*LLSGSAIFSCRRAS
Trigger: TGAAGCTCGTCGACAGGAGAAAATGGCAGACCCTGAAAGCAACCAGGAGGCAGTAAATTCTTCAGCTGCTCGGACAGATGAAGCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000409677.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 90 bp GTCCTCATTGATTTGCTCAATGATCCGGCTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATCATCACGCCACTGCCATATCGCACC +
Preference number: 5 (lower is better)
Translates to: VLIDLLNDPAVNPVI*MPEAPIITPLPYRT
Trigger: GGTGCGATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGCAAATCAATGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283943.9
ENST00000389044.8
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTCAGCTGCTCCTCTTTaGCCCAGGCCAGAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSAAPL*PRPEPR
Trigger: GCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCACCTGGAGGTTGAGTaGTTCGGTTGCAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSHLEVE*FGCSTK
Trigger: CTTTGTGCTGCAACCGAACAACTCAACCTCCAGGTG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp TGGCAAGGCCACTACCTCCCGCAGTCCGTGCTGGCTCAATGTTGTTaGTGTTGGACTGTGTACTTAACCTTCCCCATGTTTTTGGATTCA +
Preference number: 5 (lower is better)
Translates to: WQGHYLPQSVLAQCC*CWTVYLTFPMFLDS
Trigger: TGAATCCAAAAACATGGGGAAGGTTAAGTACACAGTCCAACAGCAACAACATTGAGCCAGCACGGACTGCGGGAGGTAGTGGCCTTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp GAAACTACTACCTCAATGATCCGGCTGTCAATCCTGTTATATGGATaGCAGAGGCCCCGATCATCACGCCACTGCCATATCGCACCATCT +
Preference number: 5 (lower is better)
Translates to: ETTTSMIRLSILLYG*QRPRSSRHCHIAPS
Trigger: AGATGGTGCGATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGGTAGTAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479037.5
CDS CCA 90 bp GGCCACTACCTCCCGCAGTCCGTGCTGGCTCAATGTTGTTGCTGTTaGACTGTGTACTTAACCTTCCCCATGTTTTTGGATTCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: GHYLPQSVLAQCCCC*TVYLTFPMFLDSSL
Trigger: CAAGCTTGAATCCAAAAACATGGGGAAGGTTAAGTACACAGTCCAACAGCAACAACATTGAGCCAGCACGGACTGCGGGAGGTAGTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGAGTACTTTGGCCTTCTaGGCCCTCGTTTTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVSTLAF*ALVLAV
Trigger: GACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp CAAGGTATCTCTCGATGGCTTGTACCAAAGCCAGAGGGTCAATCTTaGCAGGTCCACCCTTCCACTGCTTCACATTTGCACAGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: QGISRWLVPKPEGQS*QVHPSTASHLHSLD
Trigger: ATCCAGACTGTGCAAATGTGAAGCAGTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGCTTTGGTACAAGCCATCGAGAGATACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000495322.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp TCAATCCTGTTATATGGATGCCAGAGGCCCCGATCATCACGCCACTaGCATATCGCACCATCTGTGTTCTGTGCATTTCCCTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: SILLYGCQRPRSSRH*HIAPSVFCAFPFFN
Trigger: GTTGAAGAAGGGAAATGCACAGAACACAGATGGTGCGATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp TCATTGATTTGCTCAATGATCCGGCTGTCAATCCTGTTATATGGATaGCAGAGGCCCCGATCATCACGCCACTGCCATATCGCACCATCT +
Preference number: 5 (lower is better)
Translates to: SLICSMIRLSILLYG*QRPRSSRHCHIAPS
Trigger: AGATGGTGCGATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGCAAATCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283943.9
ENST00000389044.8
CDS GCA 90 bp ATCAGGCCTACAGCATTCCATCAGTGTCTTTGCATCCCAAGTGTCTaGTTTACTGCCACAAAGGAGCTGATCCAGTTCCTCCGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: IRPTAFHQCLCIPSV*FTATKELIQFLRVE
Trigger: TTCTACCCGGAGGAACTGGATCAGCTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCAAAGACACTGATGGAATGCTGTAGGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTTCACTCCTCGAGAATaGTCTTTCTTAGGCACCTGC +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSFTPRE*SFLGTC
Trigger: GCAGGTGCCTAAGAAAGACAATTCTCGAGGAGTGAA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTTTACTGCCTCCTGGTaGCTTTCAGGGTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVFTASW*LSGSAI
Trigger: AATGGCAGACCCTGAAAGCAACCAGGAGGCAGTAAA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGAGGGGGAAGACCCCTaGCCTCTAACAAAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSEGEDP*PLTKLA
Trigger: TGCAAGCTTTGTTAGAGGCAAGGGGTCTTCCCCCTC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTCCTCATGCTGGAAGTaGTCCACTAGGCGTGCAAAA +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVSSCWK*STRRAK
Trigger: TTTTGCACGCCTAGTGGACAACTTCCAGCATGAGGA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCAGTTCATACAACTCTaGAGGGCTTCGTGGAACAAG +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSQFIQL*RASWNK
Trigger: CTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACTG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTTCTTCAGTTCGATATaGGGAAACCCTGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSFFSSI*GNPGRV
Trigger: CACTCTGCCAGGGTTTCCCAATATCGAACTGAAGAA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTTGGTGCTCTGTCCCTaGGCCTTCTGTGGTAGGATG +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGLVLCP*AFCGRM
Trigger: CATCCTACCACAGAAGGCCAAGGGACAGAGCACCAA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGTGCTACACCCAGCTTaGGCTGAGGTGGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSVLHPA*AEVADF
Trigger: AAAATCAGCCACCTCAGCCAAAGCTGGGTGTAGCAC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGGAGCCCGTGGTCTTTaGGCGTGTGCTCCGCCTCAA +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAGARGL*ACAPPQ
Trigger: TTGAGGCGGAGCACACGCCAAAAGACCACGGGCTCC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGGAGCCCGTGGTCTTTaGGCGTGTGCTCCGCCTCAA +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNGARGL*ACAPPQ
Trigger: TTGAGGCGGAGCACACGCCAAAAGACCACGGGCTCC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTCAGCTGCTCCTCTTTaGCCCAGGCCAGAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCSAAPL*PRPEPR
Trigger: GCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCAGCTGCTCCTCTTTaGCCCAGGCCAGAGCCTCGC +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSAAPL*PRPEPR
Trigger: GCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGAGGGGGAAGACCCCTaGCCTCTAACAAAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLEGEDP*PLTKLA
Trigger: TGCAAGCTTTGTTAGAGGCAAGGGGTCTTCCCCCTC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTTGGAGGTGAGTACTTaGGCCTTCTTGGCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGLEVST*AFLALV
Trigger: AACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATGGAGATGGTATCCTTaGAGGCAGCCCTGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLWRWYP*RQPWQG
Trigger: GCCTTGCCAGGGCTGCCTCAAAGGATACCATCTCCA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCCATCCACCTGGAGGTaGAGTTGTTCGGTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVPSTWR*SCSVAA
Trigger: TGCTGCAACCGAACAACTCAACCTCCAGGTGGATGG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGCCTGTGATCCTCTGTaGAGAGAAAAGCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSACDPL*REKLPP
Trigger: AGGAGGCAGCTTTTCTCTCAACAGAGGATCACAGGC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTCCACTGCTTCACATTaGCACAGTCTGGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVSTASH*HSLDAF
Trigger: AAAGGCATCCAGACTGTGCAAATGTGAAGCAGTGGA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGCCAGAGGGTCAATCTaGACAGGTCCACCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLARGSI*TGPPFH
Trigger: GTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGACAAATGAGCTTTCCTaGTCTCATTCCAGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSTNELS*SHSRGC
Trigger: ACAGCCTCTGGAATGAGACAAGGAAAGCTCATTTGT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp CCATCCACCTGGAGGTTGAGTTGTTCGGTTGCAGCACAAAGTCTCTaGAGGACATTCAATGCAGGGTTGCTTCCATCCATATTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: PSTWRLSCSVAAQSL*RTFNAGLLPSIFSE
Trigger: TTCTGAGAATATGGATGGAAGCAACCCTGCATTGAATGTCCTTCAGAGACTTTGTGCTGCAACCGAACAACTCAACCTCCAGGTGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp TTTGCTGTCCTACCAAAGGGAAGCGCAAACAGGCCCTGGAGGTTTTaGATATACTTGGTCCCTTCTTGGCTCCCTTTTGGATTGCTAAGA +
Preference number: 5 (lower is better)
Translates to: FAVLPKGSANRPWRF*IYLVPSWLPFGLLR
Trigger: TCTTAGCAATCCAAAAGGGAGCCAAGAAGGGACCAAGTATATTCAAAACCTCCAGGGCCTGTTTGCGCTTCCCTTTGGTAGGACAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp TGTACCAAAGCCAGAGGGTCAATCTTGACAGGTCCACCCTTCCACTaGTTCACATTTGCACAGTCTGGATGCCTTTGTAACTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: CTKARGSILTGPPFH*FTFAQSGCLCNWHF
Trigger: AAAATGCCAGTTACAAAGGCATCCAGACTGTGCAAATGTGAAGCAGTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGCTTTGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000495322.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGCTACACCCAGCTTaGGCTGAGGTGGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVVLHPA*AEVADF
Trigger: AAAATCAGCCACCTCAGCCAAAGCTGGGTGTAGCAC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGTGCTACACCCAGCTTaGGCTGAGGTGGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGVLHPA*AEVADF
Trigger: AAAATCAGCCACCTCAGCCAAAGCTGGGTGTAGCAC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGCTGGAACAACACTCTaGACAGGAAACCCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVAGTTL*TGNPPS
Trigger: ACTGGGAGGGTTTCCTGTCAAGAGTGTTGTTCCAGC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGCTGGAACAACACTCTaGACAGGAAACCCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLAGTTL*TGNPPS
Trigger: ACTGGGAGGGTTTCCTGTCAAGAGTGTTGTTCCAGC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGCTGGAACAACACTCTaGACAGGAAACCCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGAGTTL*TGNPPS
Trigger: ACTGGGAGGGTTTCCTGTCAAGAGTGTTGTTCCAGC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTTCCTCATGCTGGAAGTaGTCCACTAGGCGTGCAAAA +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSSSCWK*STRRAK
Trigger: TTTTGCACGCCTAGTGGACAACTTCCAGCATGAGGA...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCACTACCAACAGCTGTaGAACATTTGTAAGCAGATC +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSHYQQL*NICKQI
Trigger: GATCTGCTTACAAATGTTCAACAGCTGTTGGTAGTG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGTTCCCGTGTCCTCATaGATTTGCTCAATGATCCGG +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSVPVSS*ICSMIR
Trigger: CCGGATCATTGAGCAAATCAATGAGGACACGGGAAC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283943.9
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAGTACTTTGGCCTTCTaGGCCCTCGTTTTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSTLAF*ALVLAV
Trigger: GACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAGTACTTTGGCCTTCTaGGCCCTCGTTTTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLSTLAF*ALVLAV
Trigger: GACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTTGGAGGTGAGTACTTaGGCCTTCTTGGCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVLEVST*AFLALV
Trigger: AACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCACCTGGAGGTTGAGTaGTTCGGTTGCAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGHLEVE*FGCSTK
Trigger: CTTTGTGCTGCAACCGAACAACTCAACCTCCAGGTG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACCATCCACCTGGAGGTaGAGTTGTTCGGTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLPSTWR*SCSVAA
Trigger: TGCTGCAACCGAACAACTCAACCTCCAGGTGGATGG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGTATCTCTCGATGGCTaGTACCAAAGCCAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGVSLDG*YQSQRV
Trigger: GACCCTCTGGCTTTGGTACAAGCCATCGAGAGATAC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGCTCTGCCTAGAGGATaGCTCTCATCATCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSALPRG*LSSSVD
Trigger: ATCCACAGATGATGAGAGCAATCCTCTAGGCAGAGC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTGGCTCCCTTTTGGATaGCTAAGAGTTACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSWLPFG*LRVTSS
Trigger: TGAAGAAGTAACTCTTAGCAATCCAAAAGGGAGCCA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGATTCCATCAGTGTCTTaGCATCCCAAGTGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVIPSVS*HPKCLL
Trigger: AAGCAGACACTTGGGATGCAAAGACACTGATGGAAT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTCATTCCAGAGGCTGTaGCTGCTGGAATTGCCATGT +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGSFQRL*LLELPC
Trigger: ACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGAGGTTTCTGCTGGGTTaGGCTAAGGCATCTAAAACT +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVRFLLG*AKASKT
Trigger: AGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACCT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATTGGTGCTCTGTCCCTaGGCCTTCTGTGGTAGGATG +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLLVLCP*AFCGRM
Trigger: CATCCTACCACAGAAGGCCAAGGGACAGAGCACCAA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTCTTGGATACTGAAGTaGGTGCTCTGTCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSWILK*VLCPLA
Trigger: GGCCAAGGGACAGAGCACCAACTTCAGTATCCAAGA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp ATGAGTATAACCATGATCAGGCCTACAGCATTCCATCAGTGTCTTTaGATCCCAAGTGTCTGCTTTACTGCCACAAAGGAGCTGATCCAG +
Preference number: 5 (lower is better)
Translates to: MSITMIRPTAFHQCL*IPSVCFTATKELIQ
Trigger: CTGGATCAGCTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCAAAGACACTGATGGAATGCTGTAGGCCTGATCATGGTTATACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000418123.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 90 bp GAGGGCTTCGTGGAACAAGATCAATCTGTTCCTGACAACTTCCATTaGAGGCACCACACAGGAGAAAGTGAAGCGTTTCTGCAATGTTTT +
Preference number: 5 (lower is better)
Translates to: EGFVEQDQSVPDNFH*RHHTGESEAFLQCF
Trigger: AAAACATTGCAGAAACGCTTCACTTTCTCCTGTGTGGTGCCTCCAATGGAAGTTGTCAGGAACAGATTGATCTTGTTCCACGAAGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 90 bp GCTGCCTCCTGTCCCATTTCCACTAGGGAAATCATGTACTTTGACTaGAAATTGTTCCATCTGGCTGAGGCAGTTGTTCATCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: AASCPISTREIMYFD*KLFHLAEAVVHLVN
Trigger: GTTCACAAGATGAACAACTGCCTCAGCCAGATGGAACAATTTCCAGTCAAAGTACATGATTTCCCTAGTGGAAATGGGACAGGAGGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 90 bp CCTGCCTCCTGTCCCATTTCCACTAGGGAAATCATGTACTTTGACTaGAAATTGTTCCATCTGGCTGAGGCAGTTGTTCATCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: PASCPISTREIMYFD*KLFHLAEAVVHLVN
Trigger: GTTCACAAGATGAACAACTGCCTCAGCCAGATGGAACAATTTCCAGTCAAAGTACATGATTTCCCTAGTGGAAATGGGACAGGAGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461189.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAGCTTCTTCCTCCTATaGAGTCGTCTTGTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLSFFLL*SRLVVG
Trigger: CCCAACCACAAGACGACTCAATAGGAGGAAGAAGCT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283943.9
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGTCTGGATCCTCTGGTaGTGGAACTATCACAGCAGA +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLVWILW*WNYHSR
Trigger: TCTGCTGTGATAGTTCCACAACCAGAGGATCCAGAC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGATTTTGAAGCCAGCTaGGTAGGTTTCGCAGATCTC +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGDFEAS*VGFADL
Trigger: GAGATCTGCGAAACCTACCAAGCTGGCTTCAAAATC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTTTACTGCCTCCTGGTaGCTTTCAGGGTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGFTASW*LSGSAI
Trigger: AATGGCAGACCCTGAAAGCAACCAGGAGGCAGTAAA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTTTACTGCCTCCTGGTaGCTTTCAGGGTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVFTASW*LSGSAI
Trigger: AATGGCAGACCCTGAAAGCAACCAGGAGGCAGTAAA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATAGCCCCTGCAGCTCCTaGGGGAGCTTCATCTGTCCG +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYSPCSS*GSFICP
Trigger: CGGACAGATGAAGCTCCCCAAGGAGCTGCAGGGGCT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283943.9
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTCCTCATGCTGGAAGTaGTCCACTAGGCGTGCAAAA +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSSCWK*STRRAK
Trigger: TTTTGCACGCCTAGTGGACAACTTCCAGCATGAGGA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGGCTAAAGTTGGACAGTaGGAACACATCAGAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVAKVGQ*EHIREN
Trigger: GTTTTCTCTGATGTGTTCCAACTGTCCAACTTTAGC...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTCTTCAGGTCTTGGCTaGACAGCATGGAAGCAATGT +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGSSGLG*TAWKQC
Trigger: ACATTGCTTCCATGCTGTCAAGCCAAGACCTGAAGA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTCTTTGTCATCATCTCTaGGAGGTGAGTACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSLCHHL*EVSTLA
Trigger: GGCCAAAGTACTCACCTCCAAGAGATGATGACAAAG...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGCTGGCTCAATGTTGTaGCTGTTGGACTGTGTACTT +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSAGSML*LLDCVL
Trigger: AAGTACACAGTCCAACAGCAACAACATTGAGCCAGC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCGTGCTGGCTCAATGTaGTTGCTGTTGGACTGTGTA +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGRAGSM*LLLDCV
Trigger: TACACAGTCCAACAGCAACAACATTGAGCCAGCACG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACGTGCTGGCTCAATGTaGTTGCTGTTGGACTGTGTA +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLRAGSM*LLLDCV
Trigger: TACACAGTCCAACAGCAACAACATTGAGCCAGCACG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTGGAGATGGTATCCTTaGAGGCAGCCCTGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAWRWYP*RQPWQG
Trigger: GCCTTGCCAGGGCTGCCTCAAAGGATACCATCTCCA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTGGAGATGGTATCCTTaGAGGCAGCCCTGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRWRWYP*RQPWQG
Trigger: GCCTTGCCAGGGCTGCCTCAAAGGATACCATCTCCA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGCCAGAGGGTCAATCTaGACAGGTCCACCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCARGSI*TGPPFH
Trigger: GTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGCTCTGCCTAGAGGATaGCTCTCATCATCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGALPRG*LSSSVD
Trigger: ATCCACAGATGATGAGAGCAATCCTCTAGGCAGAGC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTTTCGTTGGAGCTGTTaGGGCTCTTCCTCTTTTACC +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGFRWSC*GSSSFT
Trigger: GGTAAAAGAGGAAGAGCCCAAACAGCTCCAACGAAA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGCAACTCTGCTATCTaGAGAATCAGACTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVCNSAI*RIRLVD
Trigger: ATCAACCAGTCTGATTCTCAAGATAGCAGAGTTGCA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTTCTTCAGTTCGATATaGGGAAACCCTGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGFFSSI*GNPGRV
Trigger: CACTCTGCCAGGGTTTCCCAATATCGAACTGAAGAA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTTTCTTCAGTTCGATATaGGGAAACCCTGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSFFSSI*GNPGRV
Trigger: CACTCTGCCAGGGTTTCCCAATATCGAACTGAAGAA...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGTCTGAACGAATCAAATaGCCTAGAAACGCCTTCATT +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSSERIK*PRNAFI
Trigger: AATGAAGGCGTTTCTAGGCAATTTGATTCGTTCAGA...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCTCCAACAGGCAATCTaGGGCTACCAGTCACAAACT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGLQQAI*GYQSQT
Trigger: AGTTTGTGACTGGTAGCCCAAGATTGCCTGTTGGAG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACTCCAACAGGCAATCTaGGGCTACCAGTCACAAACT +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLQQAI*GYQSQT
Trigger: AGTTTGTGACTGGTAGCCCAAGATTGCCTGTTGGAG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTCATTCCAGAGGCTGTaGCTGCTGGAATTGCCATGT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVSFQRL*LLELPC
Trigger: ACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGGAAAAGCCATTCACTaGTCAGTCTCTGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSGKAIH*SVSAET
Trigger: TGTCTCTGCAGAGACTGACAAGTGAATGGCTTTTCC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGAGTGGTCACATTCATTaGAAGGCACCACTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGSGHIH*KAPLLS
Trigger: GGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACT...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTATATCCCTTATGTTTaGCCTGCCCTAAATGTGACC +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVYIPYV*PALNVT
Trigger: GGTCACATTTAGGGCAGGCAAAACATAAGGGATATA...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp CAGTTCCTCCGGGTAGAAGTACTGAAGATGACTGAGTGGGAAGACTaGTTCAAATCCATCTCTGAACGAATCAAATTGCCTAGAAACGCC +
Preference number: 5 (lower is better)
Translates to: QFLRVEVLKMTEWED*FKSISERIKLPRNA
Trigger: GGCGTTTCTAGGCAATTTGATTCGTTCAGAGATGGATTTGAATCAGTCTTCCCACTCAGTCATCTTCAGTACTTCTACCCGGAGGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp GGCAGACACTGCATTTCTTGCTATGATCAGGAAAGATGGAACGACTaGTGCCCTTCTCTTGCTGCTATCAACAGTTTTTCACGCATTATC +
Preference number: 5 (lower is better)
Translates to: GRHCISCYDQERWND*CPSLAAINSFSRII
Trigger: GATAATGCGTGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCATAGCAAGAAATGCAGTGTCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTATTGGCACCTCTCTCTaGAAGGGACATACCCTTTCT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVIGTSL*KGHTLS
Trigger: AGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAAT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTATTGGCACCTCTCTCTaGAAGGGACATACCCTTTCT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGIGTSL*KGHTLS
Trigger: AGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAAT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGATTTTGAAGCCAGCTaGGTAGGTTTCGCAGATCTC +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGDFEAS*VGFADL
Trigger: GAGATCTGCGAAACCTACCAAGCTGGCTTCAAAATC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGCTTAAACTTGCTAATTaGGCCTGTAATCCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVLKLAN*ACNPEG
Trigger: ACCTTCTGGATTACAGGCCAAATTAGCAAGTTTAAG...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGAGGGGGAAGACCCCTaGCCTCTAACAAAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNEGEDP*PLTKLA
Trigger: TGCAAGCTTTGTTAGAGGCAAGGGGTCTTCCCCCTC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGAGGGGGAAGACCCCTaGCCTCTAACAAAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMEGEDP*PLTKLA
Trigger: TGCAAGCTTTGTTAGAGGCAAGGGGTCTTCCCCCTC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTAACTGCCTGAAGCTGTaGACTTTCATCACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVNCLKL*TFITGL
Trigger: CAAGCCAGTGATGAAAGTCAACAGCTTCAGGCAGTT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAACTGCCTGAAGCTGTaGACTTTCATCACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGNCLKL*TFITGL
Trigger: CAAGCCAGTGATGAAAGTCAACAGCTTCAGGCAGTT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAAACTGCCTGAAGCTGTaGACTTTCATCACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLNCLKL*TFITGL
Trigger: CAAGCCAGTGATGAAAGTCAACAGCTTCAGGCAGTT...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTTTGTAAGCAGATCTTaGGAAGCAACCTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGFVSRS*EATCWS
Trigger: ACTCCAGCAGGTTGCTTCCAAAGATCTGCTTACAAA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGTTTCTGCAATGTTTaGTTTCATAAGTTGAACAGC +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSRFCNV*FHKLNS
Trigger: GCTGTTCAACTTATGAAACAAAACATTGCAGAAACG...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTACTTTGTCATCATCTCTaGGAGGTGAGTACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLLCHHL*EVSTLA
Trigger: GGCCAAAGTACTCACCTCCAAGAGATGATGACAAAG...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTACCTTCCCCATGTTTTaGGATTCAAGCTTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVTFPMF*DSSLPG
Trigger: TCCTGGCAAGCTTGAATCCAAAAACATGGGGAAGGT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCCATCCACCTGGAGGTaGAGTTGTTCGGTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRPSTWR*SCSVAA
Trigger: TGCTGCAACCGAACAACTCAACCTCCAGGTGGATGG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTCCACTGCTTCACATTaGCACAGTCTGGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGSTASH*HSLDAF
Trigger: AAAGGCATCCAGACTGTGCAAATGTGAAGCAGTGGA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTATCCACTGCTTCACATTaGCACAGTCTGGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLSTASH*HSLDAF
Trigger: AAAGGCATCCAGACTGTGCAAATGTGAAGCAGTGGA...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTATACTTGGTCCCTTCTaGGCTCCCTTTTGGATTGCT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGILGPF*APFWIA
Trigger: AGCAATCCAAAAGGGAGCCAAGAAGGGACCAAGTAT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGAAATCCATGATAGCCTaGGCCATTAATTTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSKSMIA*AINFPK
Trigger: CTTAGGAAAATTAATGGCCAAGGCTATCATGGATTT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTATTCCATCAGTGTCTTaGCATCCCAAGTGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSIPSVS*HPKCLL
Trigger: AAGCAGACACTTGGGATGCAAAGACACTGATGGAAT...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTACTGCTGCCCTTCTCTaGCTGCTATCAACAGTTTTT +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSTAALL*LLSTVF
Trigger: AAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGT...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGACTGCTGCCCTTCTCTaGCTGCTATCAACAGTTTTT +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGTAALL*LLSTVF
Trigger: AAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGT...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGCACAGCCACATTTATaGTTCCAGCCTGGAAAAACA +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSAQPHL*FQPGKT
Trigger: TGTTTTTCCAGGCTGGAACAATAAATGTGGCTGTGC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGCCACAGGCCTAGTTTaGGACCTTAGGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLATGLV*DLRKES
Trigger: AGATTCCTTCCTAAGGTCCAAAACTAGGCCTGTGGC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAGCTGCAGCACCTGCTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGACAGGAGATCAGCAATaGGTTATAGGTTTGGAAATA +
Preference number: 5 (lower is better)
Translates to: QLQHLLSQKEDGKLTTYSTGDQQ*VIGLEI
Trigger: TATTTCCAAACCTATAACCAATTGCTGATCTCCTGT...CGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAGCAGGTGCTGCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp GAATATCCACTAGTGTTACTATTGGCTAACGGGTTAGGTTTTCTCTaGATGGCACGTGCTGTTCCCGTGTCCTCATTGATTTGCTCAATG +
Preference number: 5 (lower is better)
Translates to: EYPLVLLLANGLGFL*MARAVPVSSLICSM
Trigger: CATTGAGCAAATCAATGAGGACACGGGAACAGCACGTGCCATTCAGAGAAAACCTAACCCGTTAGCCAATAGTAACACTAGTGGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283943.9
ENST00000389044.8
CDS TCA 90 bp TTGACTGGAAATTGTTCCATCTGGCTGAGGCAGTTGTTCATCTTGTaGACTAATGCCAACAAAGGTGCATTACCCACTGGTTCCACTCTT +
Preference number: 5 (lower is better)
Translates to: LTGNCSIWLRQLFIL*TNANKGALPTGSTL
Trigger: AAGAGTGGAACCAGTGGGTAATGCACCTTTGTTGGCATTAGTTCACAAGATGAACAACTGCCTCAGCCAGATGGAACAATTTCCAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000461189.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp ATTAATTTTCCTAAGAAGCGAAACTTCATCTTAACCTTTGCGATATaGGCTGGCTTTGCTGTCCTACCAAAGGGAAGCGCAAACAGGCCC +
Preference number: 5 (lower is better)
Translates to: INFPKKRNFILTFAI*AGFAVLPKGSANRP
Trigger: GGGCCTGTTTGCGCTTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATCGCAAAGGTTAAGATGAAGTTTCGCTTCTTAGGAAAATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000459841.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp GAATATCCACTAGTGTTACTATTGGCTAACGGGTTAGGTTTTCTCTaGATGGCACGTGCTGTTCCCGTGTCCTCATTGATTTGCTGCATA +
Preference number: 5 (lower is better)
Translates to: EYPLVLLLANGLGFL*MARAVPVSSLICCI
Trigger: TATGCAGCAAATCAATGAGGACACGGGAACAGCACGTGCCATTCAGAGAAAACCTAACCCGTTAGCCAATAGTAACACTAGTGGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389045.7
ENST00000487178.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp CACTATGTTGGATTTCAAATGATGAAACATCTGACTCTGAGACTATaGTACGGATTTCTACAAGGCACTCAGCTCCACCATCCACCTGGA +
Preference number: 5 (lower is better)
Translates to: HYVGFQMMKHLTLRL*YGFLQGTQLHHPPG
Trigger: TCCAGGTGGATGGTGGAGCTGAGTGCCTTGTAGAAATCCGTAGCATAGTCTCAGAGTCAGATGTTTCATCATTTGAAATCCAACATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 90 bp TTCACAAATCAGAGATGTCAGTTCATACAACTCTTGAGGGCTTCGTaGAACAAGATCAATCTGTTCCTGACAACTTCCATTGGAGGCACC +
Preference number: 5 (lower is better)
Translates to: FTNQRCQFIQLLRAS*NKINLFLTTSIGGT
Trigger: GGTGCCTCCAATGGAAGTTGTCAGGAACAGATTGATCTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACTGACATCTCTGATTTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTGTCTTTCTGAAGTATaGGCTCTGTCTGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGCLSEV*ALSGSS
Trigger: AGAGGATCCAGACAGAGCCAATACTTCAGAAAGACA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTGTCTTTCTGAAGTATaGGCTCTGTCTGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVCLSEV*ALSGSS
Trigger: AGAGGATCCAGACAGAGCCAATACTTCAGAAAGACA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATGGTATGAGCCTTGCTaGTTGATGGTGATTGTGCAG +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLWYEPC*LMVIVQ
Trigger: CTGCACAATCACCATCAACAAGCAAGGCTCATACCA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGATTTTGAAGCCAGCTaGGTAGGTTTCGCAGATCTC +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLDFEAS*VGFADL
Trigger: GAGATCTGCGAAACCTACCAAGCTGGCTTCAAAATC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGCTGGAACAACACTCTaGACAGGAAACCCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRAGTTL*TGNPPS
Trigger: ACTGGGAGGGTTTCCTGTCAAGAGTGTTGTTCCAGC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGGCTAAAGTTGGACAGTaGGAACACATCAGAGAAAAC +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGAKVGQ*EHIREN
Trigger: GTTTTCTCTGATGTGTTCCAACTGTCCAACTTTAGC...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTGTTGAACAGCTAAAGTaGGACAGTTGGAACACATCA +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSVEQLK*DSWNTS
Trigger: TGATGTGTTCCAACTGTCCAACTTTAGCTGTTCAAC...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTCCACTAGTGTTACTATaGGCTAACGGGTTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSPLVLL*ANGLGF
Trigger: AAAACCTAACCCGTTAGCCAATAGTAACACTAGTGG...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTTCTTGGCCCTCGTTTaGGCAGTCGTTTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVFLALV*AVVFSL
Trigger: TAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTTGGAGGTGAGTACTTaGGCCTTCTTGGCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRLEVST*AFLALV
Trigger: AACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTGGAGGTGAGTACTTaGGCCTTCTTGGCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMLEVST*AFLALV
Trigger: AACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAGCTGGCTCAATGTTGTaGCTGTTGGACTGTGTACTT +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLAGSML*LLDCVL
Trigger: AAGTACACAGTCCAACAGCAACAACATTGAGCCAGC...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTGGAGATGGTATCCTTaGAGGCAGCCCTGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYWRWYP*RQPWQG
Trigger: GCCTTGCCAGGGCTGCCTCAAAGGATACCATCTCCA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCACCTGGAGGTTGAGTaGTTCGGTTGCAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRHLEVE*FGCSTK
Trigger: CTTTGTGCTGCAACCGAACAACTCAACCTCCAGGTG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCACCTGGAGGTTGAGTaGTTCGGTTGCAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNHLEVE*FGCSTK
Trigger: CTTTGTGCTGCAACCGAACAACTCAACCTCCAGGTG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCCATCCACCTGGAGGTaGAGTTGTTCGGTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLPSTWR*SCSVAA
Trigger: TGCTGCAACCGAACAACTCAACCTCCAGGTGGATGG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGCCTGTGATCCTCTGTaGAGAGAAAAGCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRACDPL*REKLPP
Trigger: AGGAGGCAGCTTTTCTCTCAACAGAGGATCACAGGC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGCCTGTGATCCTCTGTaGAGAGAAAAGCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNACDPL*REKLPP
Trigger: AGGAGGCAGCTTTTCTCTCAACAGAGGATCACAGGC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGTATCTCTCGATGGCTaGTACCAAAGCCAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAVSLDG*YQSQRV
Trigger: GACCCTCTGGCTTTGGTACAAGCCATCGAGAGATAC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGTATCTCTCGATGGCTaGTACCAAAGCCAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNVSLDG*YQSQRV
Trigger: GACCCTCTGGCTTTGGTACAAGCCATCGAGAGATAC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTGGCTCCCTTTTGGATaGCTAAGAGTTACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGWLPFG*LRVTSS
Trigger: TGAAGAAGTAACTCTTAGCAATCCAAAAGGGAGCCA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTATTCCATCAGTGTCTTaGCATCCCAAGTGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGIPSVS*HPKCLL
Trigger: AAGCAGACACTTGGGATGCAAAGACACTGATGGAAT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGCACAGCCACATTTATaGTTCCAGCCTGGAAAAACA +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLAQPHL*FQPGKT
Trigger: TGTTTTTCCAGGCTGGAACAATAAATGTGGCTGTGC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTACAAATGAGCTTTCCTaGTCTCATTCCAGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVTNELS*SHSRGC
Trigger: ACAGCCTCTGGAATGAGACAAGGAAAGCTCATTTGT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTAAGCCAGAAGGAAGACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGATACACATCTGTAGTTaGAGGTTCCATTATTCCAAC +
Preference number: 5 (lower is better)
Translates to: LSQKEDGKLTTYSRQSSVIHICS*RFHYSN
Trigger: GTTGGAATAATGGAACCTCAAACTACAGATGTGTAT...CACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGTCTTCCTTCTGGCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGTGACCTTCCTCCTATaGAGTCGTCTTGTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNVTFLL*SRLVVG
Trigger: CCCAACCACAAGACGACTCAATAGGAGGAAGGTCAC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGTGACCTTCCTCCTATaGAGTCGTCTTGTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMVTFLL*SRLVVG
Trigger: CCCAACCACAAGACGACTCAATAGGAGGAAGGTCAC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp TGTGTTAGCCTTTGGGTTAGCAATGGGAGTGAATCTGCCACAAAATaGAATTCATCTGGCGTGATACTCTGGCAGCAATTAGCTGCAATT +
Preference number: 5 (lower is better)
Translates to: CVSLWVSNGSESATK*NSSGVILWQQLAAI
Trigger: AATTGCAGCTAATTGCTGCCAGAGTATCACGCCAGATGAATTTCATTTTGTGGCAGATTCACTCCCATTGCTAACCCAAAGGCTAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000477441.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp GTTGAGTTGTTCGGTTGCAGCACAAAGTCTCTGAAGGACATTCAATaGAGGGTTGCTTCCATCCATATTCTCAGAACTGAAATAACGTTC +
Preference number: 5 (lower is better)
Translates to: VELFGCSTKSLKDIQ*RVASIHILRTEITF
Trigger: GAACGTTATTTCAGTTCTGAGAATATGGATGGAAGCAACCCTGCATTGAATGTCCTTCAGAGACTTTGTGCTGCAACCGAACAACTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp AGACACTGCATTTCTTGCTATGATCAGGAAAGATGGAACGACTGCTaGCCTTCTCTTGCTGCTATCAACAGTTTTTCACGCATTATCTCA +
Preference number: 5 (lower is better)
Translates to: RHCISCYDQERWNDC*PSLAAINSFSRIIS
Trigger: TGAGATAATGCGTGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCATAGCAAGAAATGCAGTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp TACAGCATTCCATCAGTGTCTTTGCATCCCAAGTGTCTGCTTTACTaGCACAAAGGAGCTGATCCAGTCTTAGATACTCCTCTAAATTGT +
Preference number: 5 (lower is better)
Translates to: YSIPSVSLHPKCLLY*HKGADPVLDTPLNC
Trigger: ACAATTTAGAGGAGTATCTAAGACTGGATCAGCTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCAAAGACACTGATGGAATGCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418123.1
CDS CCA 90 bp GTGATACTCTGGCAGCAATTAGCTGCAATTGCTAATGCATTTCTTTaGGCATTTATGCTGAAGAATTCTAGGTACAGCAAGCAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: VILWQQLAAIANAFL*AFMLKNSRYSKQSA
Trigger: GGCAGACTGCTTGCTGTACCTAGAATTCTTCAGCATAAATGCCCAAAGAAATGCATTAGCAATTGCAGCTAATTGCTGCCAGAGTATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000477441.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTTGTTATTAGGCCGGTaGGACATTGGCACCTCTCTC +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGALLLGR*DIGTSL
Trigger: GAGAGAGGTGCCAATGTCCAACCGGCCTAATAACAA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTCTGGATCCTCTGGTaGTGGAACTATCACAGCAGA +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCVWILW*WNYHSR
Trigger: TCTGCTGTGATAGTTCCACAACCAGAGGATCCAGAC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTATGAGCCTTGCTTGTaGATGGTGATTGTGCAGATT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGYEPCL*MVIVQI
Trigger: AATCTGCACAATCACCATCAACAAGCAAGGCTCATA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTCAGCCCAATCAAATTTaGAAGAGCCACCAGTTTTAC +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVQPNQI*KSHQFY
Trigger: GTAAAACTGGTGGCTCTTCAAAATTTGATTGGGCTG...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGCTTAAACTTGCTAATTaGGCCTGTAATCCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGLKLAN*ACNPEG
Trigger: ACCTTCTGGATTACAGGCCAAATTAGCAAGTTTAAG...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTTTACTGCCTCCTGGTaGCTTTCAGGGTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNFTASW*LSGSAI
Trigger: AATGGCAGACCCTGAAAGCAACCAGGAGGCAGTAAA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCCACTAGTGTTACTATaGGCTAACGGGTTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGPLVLL*ANGLGF
Trigger: AAAACCTAACCCGTTAGCCAATAGTAACACTAGTGG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTATGCCTTTGGTGGACTaGTCAACAAAGACTCTGATT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGMPLVD*STKTLI
Trigger: AATCAGAGTCTTTGTTGACAAGTCCACCAAAGGCAT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTATGCCTTTGGTGGACTaGTCAACAAAGACTCTGATT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVMPLVD*STKTLI
Trigger: AATCAGAGTCTTTGTTGACAAGTCCACCAAAGGCAT...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCGTGCTGGCTCAATGTaGTTGCTGTTGGACTGTGTA +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRAGSM*LLLDCV
Trigger: TACACAGTCCAACAGCAACAACATTGAGCCAGCACG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTACATTCAATGCAGGGTaGCTTCCATCCATATTCTCA +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGTFNAG*LPSIFS
Trigger: TGAGAATATGGATGGAAGCAACCCTGCATTGAATGT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGCTCTGCCTAGAGGATaGCTCTCATCATCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRALPRG*LSSSVD
Trigger: ATCCACAGATGATGAGAGCAATCCTCTAGGCAGAGC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTGGCTCCCTTTTGGATaGCTAAGAGTTACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGWLPFG*LRVTSS
Trigger: TGAAGAAGTAACTCTTAGCAATCCAAAAGGGAGCCA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCGATATGAGCTGGCTTaGCTGTCCTACCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRRYELA*LSYQRE
Trigger: TTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATCG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCGATATGAGCTGGCTTaGCTGTCCTACCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNRYELA*LSYQRE
Trigger: TTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATCG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCGATATGAGCTGGCTTaGCTGTCCTACCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCRYELA*LSYQRE
Trigger: TTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATCG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCTCCAACAGGCAATCTaGGGCTACCAGTCACAAACT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRLQQAI*GYQSQT
Trigger: AGTTTGTGACTGGTAGCCCAAGATTGCCTGTTGGAG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCTCCAACAGGCAATCTaGGGCTACCAGTCACAAACT +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCLQQAI*GYQSQT
Trigger: AGTTTGTGACTGGTAGCCCAAGATTGCCTGTTGGAG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTCATCTGGGTTTTCTGTaGATTCAAACGTCTTTCGGA +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGHLGFL*IQTSFG
Trigger: TCCGAAAGACGTTTGAATCAACAGAAAACCCAGATG...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGTACAAGAGTTGTCTTaGGAGGAAAGAAAACTGCAG +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLVQELS*EERKLQ
Trigger: CTGCAGTTTTCTTTCCTCCAAAGACAACTCTTGTAC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGCCACAGGCCTAGTTTaGGACCTTAGGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNATGLV*DLRKES
Trigger: AGATTCCTTCCTAAGGTCCAAAACTAGGCCTGTGGC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAAGGTTTCTGCTGGGTTaGGCTAAGGCATCTAAAACT +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLRFLLG*AKASKT
Trigger: AGTTTTAGATGCCTTAGCCAAACCCAGCAGAAACCT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTTGTGGATCTAATTTCTaGGATACTGAAGTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSCGSNF*DTEVGA
Trigger: AGCACCAACTTCAGTATCCAAGAAATTAGATCCACA...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTGTTCCCGTGTCCTCATaGATTTGCTGCATAGAATTA +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGVPVSS*ICCIEL
Trigger: TAATTCTATGCAGCAAATCAATGAGGACACGGGAAC...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp AACATCCCAGAACTTAAAATGGGTGGAGTCACTACCAACAGCTGTTaGACATTTGTAAGCAGATCTTTGGAAGCAACCTGCTGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: NIPELKMGGVTTNSC*TFVSRSLEATCWSK
Trigger: TTTACTCCAGCAGGTTGCTTCCAAAGATCTGCTTACAAATGTTCAACAGCTGTTGGTAGTGACTCCACCCATTTTAAGTTCTGGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp AACATCTCCAAGGCAGTCAAGGCCTGCTCTGCCACATCAATACACTaGATAACTTGCAGCTGGGAACATATATATAGTTACCATAAGGTT +
Preference number: 5 (lower is better)
Translates to: NISKAVKACSATSIH*ITCSWEHIYSYHKV
Trigger: AACCTTATGGTAACTATATATATGTTCCCAGCTGCAAGTTATTCAGTGTATTGATGTGGCAGAGCAGGCCTTGACTGCCTTGGAGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477441.1
CDS GCA 90 bp TGTGGATTCTCTTTCATCTTCAGCCTGTATACTAAACTGCCGTACTaGCTGATACACAGTCATGTTATACGGCAGCAAATGTTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: CGFSFIFSLYTKLPY*LIHSHVIRQQMFSN
Trigger: ATTGGAGAACATTTGCTGCCGTATAACATGACTGTGTATCAGGCAGTACGGCAGTTTAGTATACAGGCTGAAGATGAAAGAGAATCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTATTGGCACCTCTCTCTaGAAGGGACATACCCTTTCT +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCIGTSL*KGHTLS
Trigger: AGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAAT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGATTGGCACCTCTCTCTaGAAGGGACATACCCTTTCT +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMIGTSL*KGHTLS
Trigger: AGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAAT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGTCTGGATCCTCTGGTaGTGGAACTATCACAGCAGA +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLVWILW*WNYHSR
Trigger: TCTGCTGTGATAGTTCCACAACCAGAGGATCCAGAC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTCACTCCTCGAGAATaGTCTTTCTTAGGCACCTGC +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMFTPRE*SFLGTC
Trigger: GCAGGTGCCTAAGAAAGACAATTCTCGAGGAGTGAA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTTCACTCCTCGAGAATaGTCTTTCTTAGGCACCTGC +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAFTPRE*SFLGTC
Trigger: GCAGGTGCCTAAGAAAGACAATTCTCGAGGAGTGAA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATATGAGCCTTGCTTGTaGATGGTGATTGTGCAGATT +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLYEPCL*MVIVQI
Trigger: AATCTGCACAATCACCATCAACAAGCAAGGCTCATA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTGGTATGAGCCTTGCTaGTTGATGGTGATTGTGCAG +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRWYEPC*LMVIVQ
Trigger: CTGCACAATCACCATCAACAAGCAAGGCTCATACCA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTGGTATGAGCCTTGCTaGTTGATGGTGATTGTGCAG +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCWYEPC*LMVIVQ
Trigger: CTGCACAATCACCATCAACAAGCAAGGCTCATACCA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGATTTTGAAGCCAGCTaGGTAGGTTTCGCAGATCTC +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRDFEAS*VGFADL
Trigger: GAGATCTGCGAAACCTACCAAGCTGGCTTCAAAATC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTGCCTGAAGCTGTaGACTTTCATCACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRNCLKL*TFITGL
Trigger: CAAGCCAGTGATGAAAGTCAACAGCTTCAGGCAGTT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTACACTACCAACAGCTGTaGAACATTTGTAAGCAGATC +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLHYQQL*NICKQI
Trigger: GATCTGCTTACAAATGTTCAACAGCTGTTGGTAGTG...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCAGTTCATACAACTCTaGAGGGCTTCGTGGAACAAG +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAQFIQL*RASWNK
Trigger: CTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACTG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACAGCAATCTATGTCAAACAAGCCACTGAGTTTCTTTTGGGTGGTGGGATAGGGTGGAAGCAATGTGACTaGAAACAGCATGATTTTTCA +
Preference number: 5 (lower is better)
Translates to: TAIYVKQATEFLLGGGIGWKQCD*KQHDFS
Trigger: TGAAAAATCATGCTGTTTCAAGTCACATTGCTTCCA...CCCTATCCCACCACCCAAAAGAAACTCAGTGGCTTGTTTGACATAGATTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTCTTCAGGTCTTGGCTaGACAGCATGGAAGCAATGT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRSSGLG*TAWKQC
Trigger: ACATTGCTTCCATGCTGTCAAGCCAAGACCTGAAGA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCTTCAGGTCTTGGCTaGACAGCATGGAAGCAATGT +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSSGLG*TAWKQC
Trigger: ACATTGCTTCCATGCTGTCAAGCCAAGACCTGAAGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCTTTGTCATCATCTCTaGGAGGTGAGTACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNLCHHL*EVSTLA
Trigger: GGCCAAAGTACTCACCTCCAAGAGATGATGACAAAG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTACCTTCCCCATGTTTTaGGATTCAAGCTTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCTFPMF*DSSLPG
Trigger: TCCTGGCAAGCTTGAATCCAAAAACATGGGGAAGGT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGACCTTCCCCATGTTTTaGGATTCAAGCTTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMTFPMF*DSSLPG
Trigger: TCCTGGCAAGCTTGAATCCAAAAACATGGGGAAGGT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGCTGGCTCAATGTTGTaGCTGTTGGACTGTGTACTT +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNAGSML*LLDCVL
Trigger: AAGTACACAGTCCAACAGCAACAACATTGAGCCAGC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAACATTCAATGCAGGGTaGCTTCCATCCATATTCTCA +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLTFNAG*LPSIFS
Trigger: TGAGAATATGGATGGAAGCAACCCTGCATTGAATGT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGGGAAATCATGTACTTaGACTGGAAATTGTTCCATC +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVGKSCT*TGNCSI
Trigger: GATGGAACAATTTCCAGTCAAAGTACATGATTTCCC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTTTCGTTGGAGCTGTTaGGGCTCTTCCTCTTTTACC +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNFRWSC*GSSSFT
Trigger: GGTAAAAGAGGAAGAGCCCAAACAGCTCCAACGAAA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAAACTTCTAAAGGATTaGATACTGATGGGCACACTC +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGKLLKD*ILMGTL
Trigger: GAGTGTGCCCATCAGTATCAAATCCTTTAGAAGTTT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGATACTTGGTCCCTTCTaGGCTCCCTTTTGGATTGCT +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMILGPF*APFWIA
Trigger: AGCAATCCAAAAGGGAGCCAAGAAGGGACCAAGTAT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTATACTTGGTCCCTTCTaGGCTCCCTTTTGGATTGCT +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAILGPF*APFWIA
Trigger: AGCAATCCAAAAGGGAGCCAAGAAGGGACCAAGTAT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTTCTTCAGTTCGATATaGGGAAACCCTGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNFFSSI*GNPGRV
Trigger: CACTCTGCCAGGGTTTCCCAATATCGAACTGAAGAA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CTTTCCTTGTCTCATTCCAGAGGCTGTTGCTGCTGGAATTGCCATGTAAACAGTAGATACTCCTCTAAATaGTGGATAGTGACTGGTATA +
Preference number: 5 (lower is better)
Translates to: LSLSHSRGCCCWNCHVNSRYSSK*WIVTGI
Trigger: TATACCAGTCACTATCCACAATTTAGAGGAGTATCT...ACTGTTTACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGAGACAAGGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAACGTCTTTCGGACAATaGTCAAAGGTGGATTCAAAC +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLTSFGQ*SKVDSN
Trigger: GTTTGAATCCACCTTTGACAATTGTCCGAAAGACGT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGGAAAAGCCATTCACTaGTCAGTCTCTGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCGKAIH*SVSAET
Trigger: TGTCTCTGCAGAGACTGACAAGTGAATGGCTTTTCC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGGAAAAGCCATTCACTaGTCAGTCTCTGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNGKAIH*SVSAET
Trigger: TGTCTCTGCAGAGACTGACAAGTGAATGGCTTTTCC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTGTGGATCTAATTTCTaGGATACTGAAGTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGCGSNF*DTEVGA
Trigger: AGCACCAACTTCAGTATCCAAGAAATTAGATCCACA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTTAACTTGAAGTTCTaGGAAAACAGCCAATCCTGT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVVNLKF*ENSQSC
Trigger: ACAGGATTGGCTGTTTTCCAAGAACTTCAAGTTAAC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTATTAGACTGCACTTaGGGTGCCTTAGAATTAGAT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVVLDCT*GALELD
Trigger: ATCTAATTCTAAGGCACCCAAAGTGCAGTCTAATAC...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TCCACAATACGGAGTGGTCACATTCATTTGAAGGCACCACTCCTTTCCATGTTAGTATTAGACTGCACTTaGGGTGCCTTAGAATTAGAT +
Preference number: 5 (lower is better)
Translates to: STIRSGHIHLKAPLLSMLVLDCT*GALELD
Trigger: ATCTAATTCTAAGGCACCCAAAGTGCAGTCTAATAC...TAACATGGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACTCCGTATTGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCAGAGTGAGACTCTGTaGCGGTCTAAAGTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLQSETL*RSKVSL
Trigger: CAGAGAGACTTTAGACCGCAACAGAGTCTCACTCTG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675423.1
CDS TCA 90 bp CACACAAGTCATTACAGAGGGCAAGAAGTCATCTGGGTTTTCTGTTaGTTCAAACGTCTTTCGGACAATTGTCAAAGGTGGATTCAAACT +
Preference number: 5 (lower is better)
Translates to: HTSHYRGQEVIWVFC*FKRLSDNCQRWIQT
Trigger: AGTTTGAATCCACCTTTGACAATTGTCCGAAAGACGTTTGAATCAACAGAAAACCCAGATGACTTCTTGCCCTCTGTAATGACTTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp CTGAGTGGGAAGACTGATTCAAATCCATCTCTGAACGAATCAAATTaGCTAGAAACGCCTTCATTTAGTGCCCAGAATATAACCAGTCTT +
Preference number: 5 (lower is better)
Translates to: LSGKTDSNPSLNESN*LETPSFSAQNITSL
Trigger: AAGACTGGTTATATTCTGGGCACTAAATGAAGGCGTTTCTAGGCAATTTGATTCGTTCAGAGATGGATTTGAATCAGTCTTCCCACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp TTCAGACTTGCCATATTGTATGAGTCTTTGTCCAAATACCAGCTCTaGCTAGAGGATTGCTCTCATCATCTGTGGATTCTCTTTCATCTT +
Preference number: 5 (lower is better)
Translates to: FRLAILYESLSKYQL*LEDCSHHLWILFHL
Trigger: AAGATGAAAGAGAATCCACAGATGATGAGAGCAATCCTCTAGGCAGAGCTGGTATTTGGACAAAGACTCATACAATATGGCAAGTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470302.5
CDS CCA 90 bp CCCCCAAAGACACAGTTACATACTCTTAGATACTCCTCTAAATTGTaGATAGTGACTGGTATATCCTTCCCTCCTTTCTTCAGTTCGATA +
Preference number: 5 (lower is better)
Translates to: PPKTQLHTLRYSSKL*IVTGISFPPFFSSI
Trigger: TATCGAACTGAAGAAAGGAGGGAAGGATATACCAGTCACTATCCACAATTTAGAGGAGTATCTAAGAGTATGTAACTGTGTCTTTGGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459841.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTGTCTTTCTGAAGTATaGGCTCTGTCTGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRCLSEV*ALSGSS
Trigger: AGAGGATCCAGACAGAGCCAATACTTCAGAAAGACA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTGTCTTTCTGAAGTATaGGCTCTGTCTGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNCLSEV*ALSGSS
Trigger: AGAGGATCCAGACAGAGCCAATACTTCAGAAAGACA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTTTGTAAGCAGATCTTaGGAAGCAACCTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNFVSRS*EATCWS
Trigger: ACTCCAGCAGGTTGCTTCCAAAGATCTGCTTACAAA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTGTAAGCAGATCTTaGGAAGCAACCTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMFVSRS*EATCWS
Trigger: ACTCCAGCAGGTTGCTTCCAAAGATCTGCTTACAAA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCAGTTCATACAACTCTaGAGGGCTTCGTGGAACAAG +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLQFIQL*RASWNK
Trigger: CTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACTG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTTGGAAGCAATGTGACTaGAAACAGCATGATTTTTCA +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGWKQCD*KQHDFS
Trigger: TGAAAAATCATGCTGTTTCAAGTCACATTGCTTCCA...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCATTCGTACATGCCTTaGGTGGACTTGTCAACAAAG +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRHSYMP*VDLSTK
Trigger: CTTTGTTGACAAGTCCACCAAAGGCATGTACGAATG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTCATTCGTACATGCCTTaGGTGGACTTGTCAACAAAG +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAHSYMP*VDLSTK
Trigger: CTTTGTTGACAAGTCCACCAAAGGCATGTACGAATG...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCATTCGTACATGCCTTaGGTGGACTTGTCAACAAAG +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNHSYMP*VDLSTK
Trigger: CTTTGTTGACAAGTCCACCAAAGGCATGTACGAATG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTTCTTGGCCCTCGTTTaGGCAGTCGTTTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNFLALV*AVVFSL
Trigger: TAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTTCTTGGCCCTCGTTTaGGCAGTCGTTTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRFLALV*AVVFSL
Trigger: TAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGGTGGGGCTTTTAGCTaGATTGTCTACTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAGGAFS*IVYFVI
Trigger: GATGACAAAGTAGACAATCAAGCTAAAAGCCCCACC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGGTGGGGCTTTTAGCTaGATTGTCTACTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCGGAFS*IVYFVI
Trigger: GATGACAAAGTAGACAATCAAGCTAAAAGCCCCACC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACGGTGGGGCTTTTAGCTaGATTGTCTACTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNGGAFS*IVYFVI
Trigger: GATGACAAAGTAGACAATCAAGCTAAAAGCCCCACC...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCGTGCTGGCTCAATGTaGTTGCTGTTGGACTGTGTA +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSRAGSM*LLLDCV
Trigger: TACACAGTCCAACAGCAACAACATTGAGCCAGCACG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGCTCTGCCTAGAGGATaGCTCTCATCATCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYALPRG*LSSSVD
Trigger: ATCCACAGATGATGAGAGCAATCCTCTAGGCAGAGC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTTTCGTTGGAGCTGTTaGGGCTCTTCCTCTTTTACC +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLFRWSC*GSSSFT
Trigger: GGTAAAAGAGGAAGAGCCCAAACAGCTCCAACGAAA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAAAACTTCTAAAGGATTaGATACTGATGGGCACACTC +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLKLLKD*ILMGTL
Trigger: GAGTGTGCCCATCAGTATCAAATCCTTTAGAAGTTT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCAAGTAATCTTTGCATaGCTCGGTCCCGATCAAATG +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMQVIFA*LGPDQM
Trigger: CATTTGATCGGGACCGAGCAATGCAAAGATTACTTG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCAAGTAATCTTTGCATaGCTCGGTCCCGATCAAATG +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNQVIFA*LGPDQM
Trigger: CATTTGATCGGGACCGAGCAATGCAAAGATTACTTG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCGATATGAGCTGGCTTaGCTGTCCTACCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSRYELA*LSYQRE
Trigger: TTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATCG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTAGATACTCCTCTAAATaGTGGATAGTGACTGGTATA +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGRYSSK*WIVTGI
Trigger: TATACCAGTCACTATCCACAATTTAGAGGAGTATCT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTATTCCATCAGTGTCTTaGCATCCCAAGTGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAIPSVS*HPKCLL
Trigger: AAGCAGACACTTGGGATGCAAAGACACTGATGGAAT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTACTGCTGCCCTTCTCTaGCTGCTATCAACAGTTTTT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRTAALL*LLSTVF
Trigger: AAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGCACAGCCACATTTATaGTTCCAGCCTGGAAAAACA +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRAQPHL*FQPGKT
Trigger: TGTTTTTCCAGGCTGGAACAATAAATGTGGCTGTGC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTCATTCCAGAGGCTGTaGCTGCTGGAATTGCCATGT +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYSFQRL*LLELPC
Trigger: ACATGGCAATTCCAGCAGCAACAGCCTCTGGAATGA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTACAAATGAGCTTTCCTaGTCTCATTCCAGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCTNELS*SHSRGC
Trigger: ACAGCCTCTGGAATGAGACAAGGAAAGCTCATTTGT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGCCACAGGCCTAGTTTaGGACCTTAGGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYATGLV*DLRKES
Trigger: AGATTCCTTCCTAAGGTCCAAAACTAGGCCTGTGGC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAGTGGTCACATTCATTaGAAGGCACCACTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLSGHIH*KAPLLS
Trigger: GGAAAGGAGTGGTGCCTTCAAATGAATGTGACCACT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTATGTGGATCTAATTTCTaGGATACTGAAGTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLCGSNF*DTEVGA
Trigger: AGCACCAACTTCAGTATCCAAGAAATTAGATCCACA...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ACGGCAAACTTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTTCCTCCAAAAAGGATTaGGCATATGAATGCACTTTT +
Preference number: 5 (lower is better)
Translates to: TANLQLTRDSPQCGKSRVSSKKD*AYECTF
Trigger: AAAAGTGCATTCATATGCCAAATCCTTTTTGGAGGA...AACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAAGTTTGCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGACTCAGGTACAGGAGATCAGCAATaGGTTATAGGTTTGGAAATA +
Preference number: 5 (lower is better)
Translates to: CKPFFLQQEGVTCFLDSGTGDQQ*VIGLEI
Trigger: TATTTCCAAACCTATAACCAATTGCTGATCTCCTGT...ACCTGAGTCAAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp ACACTAAAAATATCAGGTAACTTCTGCATTAAAATTTCTGCCATCTaGAGTGCTCCCACTACTATCTTCAGGTCTTGGCTTGACAGCATG +
Preference number: 5 (lower is better)
Translates to: TLKISGNFCIKISAI*SAPTTIFRSWLDSM
Trigger: CATGCTGTCAAGCCAAGACCTGAAGATAGTAGTGGGAGCACTTCAGATGGCAGAAATTTTAATGCAGAAGTTACCTGATATTTTTAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000487178.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 90 bp GGCAATCTTGGGCTACCAGTCACAAACTGGAGAAATAACCTCTGCTaGTCATTATCAAAACTACTGAGAATCTCAAACAAAAACTTCACA +
Preference number: 5 (lower is better)
Translates to: GNLGLPVTNWRNNLC*SLSKLLRISNKNFT
Trigger: TGTGAAGTTTTTGTTTGAGATTCTCAGTAGTTTTGATAATGAGCAGCAGAGGTTATTTCTCCAGTTTGTGACTGGTAGCCCAAGATTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000418123.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 90 bp GCCTTGCTTGTTGATGGTGATTGTGCAGATTTCAGTTGTTGCTCCTaGTCTAAATGTCTCTTCTTTGACTTACTATGTGGCTTATTTGTT +
Preference number: 5 (lower is better)
Translates to: ALLVDGDCADFSCCS*SKCLFFDLLCGLFV
Trigger: AACAAATAAGCCACATAGTAAGTCAAAGAAGAGACATTTAGACCAGGAGCAACAACTGAAATCTGCACAATCACCATCAACAAGCAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000428959.5
ENST00000430954.5
ENST00000435716.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTATGAGCCTTGCTTGTaGATGGTGATTGTGCAGATT +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCYEPCL*MVIVQI
Trigger: AATCTGCACAATCACCATCAACAAGCAAGGCTCATA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTGGTATGAGCCTTGCTaGTTGATGGTGATTGTGCAG +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSWYEPC*LMVIVQ
Trigger: CTGCACAATCACCATCAACAAGCAAGGCTCATACCA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCAGCCCAATCAAATTTaGAAGAGCCACCAGTTTTAC +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMQPNQI*KSHQFY
Trigger: GTAAAACTGGTGGCTCTTCAAAATTTGATTGGGCTG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCAGCCCAATCAAATTTaGAAGAGCCACCAGTTTTAC +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCQPNQI*KSHQFY
Trigger: GTAAAACTGGTGGCTCTTCAAAATTTGATTGGGCTG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCACTACCAACAGCTGTaGAACATTTGTAAGCAGATC +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRHYQQL*NICKQI
Trigger: GATCTGCTTACAAATGTTCAACAGCTGTTGGTAGTG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGCTAAAGTTGGACAGTaGGAACACATCAGAGAAAAC +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCAKVGQ*EHIREN
Trigger: GTTTTCTCTGATGTGTTCCAACTGTCCAACTTTAGC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTGCTAAAGTTGGACAGTaGGAACACATCAGAGAAAAC +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRAKVGQ*EHIREN
Trigger: GTTTTCTCTGATGTGTTCCAACTGTCCAACTTTAGC...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTCCACTAGTGTTACTATaGGCTAACGGGTTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCPLVLL*ANGLGF
Trigger: AAAACCTAACCCGTTAGCCAATAGTAACACTAGTGG...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGATGCCTTTGGTGGACTaGTCAACAAAGACTCTGATT +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMMPLVD*STKTLI
Trigger: AATCAGAGTCTTTGTTGACAAGTCCACCAAAGGCAT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCATTCGTACATGCCTTaGGTGGACTTGTCAACAAAG +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLHSYMP*VDLSTK
Trigger: CTTTGTTGACAAGTCCACCAAAGGCATGTACGAATG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATCTTTGTCATCATCTCTaGGAGGTGAGTACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYLCHHL*EVSTLA
Trigger: GGCCAAAGTACTCACCTCCAAGAGATGATGACAAAG...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGGTGGGGCTTTTAGCTaGATTGTCTACTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLGGAFS*IVYFVI
Trigger: GATGACAAAGTAGACAATCAAGCTAAAAGCCCCACC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGCTGGCTCAATGTTGTaGCTGTTGGACTGTGTACTT +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYAGSML*LLDCVL
Trigger: AAGTACACAGTCCAACAGCAACAACATTGAGCCAGC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTACATTCAATGCAGGGTaGCTTCCATCCATATTCTCA +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCTFNAG*LPSIFS
Trigger: TGAGAATATGGATGGAAGCAACCCTGCATTGAATGT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTGCAACTCTGCTATCTaGAGAATCAGACTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRCNSAI*RIRLVD
Trigger: ATCAACCAGTCTGATTCTCAAGATAGCAGAGTTGCA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTGCAACTCTGCTATCTaGAGAATCAGACTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCCNSAI*RIRLVD
Trigger: ATCAACCAGTCTGATTCTCAAGATAGCAGAGTTGCA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGGCTCCCTTTTGGATaGCTAAGAGTTACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMWLPFG*LRVTSS
Trigger: TGAAGAAGTAACTCTTAGCAATCCAAAAGGGAGCCA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAAAATCCATGATAGCCTaGGCCATTAATTTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLKSMIA*AINFPK
Trigger: CTTAGGAAAATTAATGGCCAAGGCTATCATGGATTT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTACAACTTACTCGCGACAGTCCTCAGTGTGGAAAATCAAGAGTTGTGGATCTAAGATACTCCTCTAAATaGTGGATAGTGACTGGTATA +
Preference number: 5 (lower is better)
Translates to: LQLTRDSPQCGKSRVVDLRYSSK*WIVTGI
Trigger: TATACCAGTCACTATCCACAATTTAGAGGAGTATCT...TAGATCCACAACTCTTGATTTTCCACACTGAGGACTGTCGCGAGTAAGTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGACGTCTTTCGGACAATaGTCAAAGGTGGATTCAAAC +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMTSFGQ*SKVDSN
Trigger: GTTTGAATCCACCTTTGACAATTGTCCGAAAGACGT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTACGTCTTTCGGACAATaGTCAAAGGTGGATTCAAAC +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRTSFGQ*SKVDSN
Trigger: GTTTGAATCCACCTTTGACAATTGTCCGAAAGACGT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCATCTGGGTTTTCTGTaGATTCAAACGTCTTTCGGA +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRHLGFL*IQTSFG
Trigger: TCCGAAAGACGTTTGAATCAACAGAAAACCCAGATG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTACTGCTGCCCTTCTCTaGCTGCTATCAACAGTTTTT +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLTAALL*LLSTVF
Trigger: AAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGTACAAGAGTTGTCTTaGGAGGAAAGAAAACTGCAG +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAVQELS*EERKLQ
Trigger: CTGCAGTTTTCTTTCCTCCAAAGACAACTCTTGTAC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAATGACTGGACAGCATaGCTTACAGGTGCTTTTATC +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRNDWTA*LTGAFI
Trigger: GATAAAAGCACCTGTAAGCAATGCTGTCCAGTCATT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp TCACAAACTGGAGAAATAACCTCTGCTGCTCATTATCAAAACTACTaGGAATCTCAAACAAAAACTTCACAGCCCGACTGTCATGAGTAT +
Preference number: 5 (lower is better)
Translates to: SQTGEITSAAHYQNY*ESQTKTSQPDCHEY
Trigger: ATACTCATGACAGTCGGGCTGTGAAGTTTTTGTTTGAGATTCTCAGTAGTTTTGATAATGAGCAGCAGAGGTTATTTCTCCAGTTTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000418123.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 90 bp TTTAGTGCCCAGAATATAACCAGTCTTAGATACTCCTCTAAATTGTaGATAGTGACTGGTATATCCTTCCCTCCTTTCTTCAGTTCGATA +
Preference number: 5 (lower is better)
Translates to: FSAQNITSLRYSSKL*IVTGISFPPFFSSI
Trigger: TATCGAACTGAAGAAAGGAGGGAAGGATATACCAGTCACTATCCACAATTTAGAGGAGTATCTAAGACTGGTTATATTCTGGGCACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTACTATGTGGCTTATTaGTTTCTGAGGGAGATTCAG +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNYYVAY*FLREIQ
Trigger: CTGAATCTCCCTCAGAAACAAATAAGCCACATAGTA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTACTATGTGGCTTATTaGTTTCTGAGGGAGATTCAG +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRYYVAY*FLREIQ
Trigger: CTGAATCTCCCTCAGAAACAAATAAGCCACATAGTA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTCTTAAACTTGCTAATTaGGCCTGTAATCCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRLKLAN*ACNPEG
Trigger: ACCTTCTGGATTACAGGCCAAATTAGCAAGTTTAAG...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGTTGAACAGCTAAAGTaGGACAGTTGGAACACATCA +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLVEQLK*DSWNTS
Trigger: TGATGTGTTCCAACTGTCCAACTTTAGCTGTTCAAC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGGGAAATCATGTACTTaGACTGGAAATTGTTCCATC +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMGKSCT*TGNCSI
Trigger: GATGGAACAATTTCCAGTCAAAGTACATGATTTCCC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGGGAAATCATGTACTTaGACTGGAAATTGTTCCATC +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCGKSCT*TGNCSI
Trigger: GATGGAACAATTTCCAGTCAAAGTACATGATTTCCC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAAACTTCTAAAGGATTaGATACTGATGGGCACACTC +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCKLLKD*ILMGTL
Trigger: GAGTGTGCCCATCAGTATCAAATCCTTTAGAAGTTT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCAAGTAATCTTTGCATaGCTCGGTCCCGATCAAATG +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSQVIFA*LGPDQM
Trigger: CATTTGATCGGGACCGAGCAATGCAAAGATTACTTG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTACTGTAGACTCTCTTaGGTCTGGGATTTATCTTGT +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMYCRLS*VWDLSC
Trigger: ACAAGATAAATCCCAGACCAAAGAGAGTCTACAGTA...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTTACTGTAGACTCTCTTaGGTCTGGGATTTATCTTGT +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRYCRLS*VWDLSC
Trigger: ACAAGATAAATCCCAGACCAAAGAGAGTCTACAGTA...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACTCTGAACGAATCAAATaGCCTAGAAACGCCTTCATT +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNSERIK*PRNAFI
Trigger: AATGAAGGCGTTTCTAGGCAATTTGATTCGTTCAGA...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTTCTGAACGAATCAAATaGCCTAGAAACGCCTTCATT +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGASERIK*PRNAFI
Trigger: AATGAAGGCGTTTCTAGGCAATTTGATTCGTTCAGA...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTGTTAACTTGAAGTTCTaGGAAAACAGCCAATCCTGT +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAVNLKF*ENSQSC
Trigger: ACAGGATTGGCTGTTTTCCAAGAACTTCAAGTTAAC...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGGTTAACTTGAAGTTCTaGGAAAACAGCCAATCCTGT +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMVNLKF*ENSQSC
Trigger: ACAGGATTGGCTGTTTTCCAAGAACTTCAAGTTAAC...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTGTTCCCGTGTCCTCATaGATTTGCTGCATAGAATTA +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLVPVSS*ICCIEL
Trigger: TAATTCTATGCAGCAAATCAATGAGGACACGGGAAC...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTATATCCCTTATGTTTaGCCTGCCCTAAATGTGACC +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLYIPYV*PALNVT
Trigger: GGTCACATTTAGGGCAGGCAAAACATAAGGGATATA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTGTATTAGACTGCACTTaGGGTGCCTTAGAATTAGAT +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCVLDCT*GALELD
Trigger: ATCTAATTCTAAGGCACCCAAAGTGCAGTCTAATAC...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 90 bp TTCTCTTGCTGCTATCAACAGTTTTTCACGCATTATCTCAATGCTTaGATAGTCCGGCAACTTAAGATAGTTCACACAAGTCATTACAGA +
Preference number: 5 (lower is better)
Translates to: FSCCYQQFFTHYLNA*IVRQLKIVHTSHYR
Trigger: TCTGTAATGACTTGTGTGAACTATCTTAAGTTGCCGGACTATTCAAGCATTGAGATAATGCGTGAAAAACTGTTGATAGCAGCAAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTACTATGTGGCTTATTaGTTTCTGAGGGAGATTCAG +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLYYVAY*FLREIQ
Trigger: CTGAATCTCCCTCAGAAACAAATAAGCCACATAGTA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTATGAGCCTTGCTTGTaGATGGTGATTGTGCAGATT +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSYEPCL*MVIVQI
Trigger: AATCTGCACAATCACCATCAACAAGCAAGGCTCATA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGTTGAACAGCTAAAGTaGGACAGTTGGAACACATCA +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYVEQLK*DSWNTS
Trigger: TGATGTGTTCCAACTGTCCAACTTTAGCTGTTCAAC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGTTGAACAGCTAAAGTaGGACAGTTGGAACACATCA +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSVEQLK*DSWNTS
Trigger: TGATGTGTTCCAACTGTCCAACTTTAGCTGTTCAAC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGCGTTTCTGCAATGTTTaGTTTCATAAGTTGAACAGC +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMRFCNV*FHKLNS
Trigger: GCTGTTCAACTTATGAAACAAAACATTGCAGAAACG...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACCGTTTCTGCAATGTTTaGTTTCATAAGTTGAACAGC +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNRFCNV*FHKLNS
Trigger: GCTGTTCAACTTATGAAACAAAACATTGCAGAAACG...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCCACTAGTGTTACTATaGGCTAACGGGTTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSPLVLL*ANGLGF
Trigger: AAAACCTAACCCGTTAGCCAATAGTAACACTAGTGG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTGGAAGCAATGTGACTaGAAACAGCATGATTTTTCA +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCWKQCD*KQHDFS
Trigger: TGAAAAATCATGCTGTTTCAAGTCACATTGCTTCCA...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTAAATCCATGATAGCCTaGGCCATTAATTTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: CLFIICKPFFLQQEGVTCKSMIA*AINFPK
Trigger: CTTAGGAAAATTAATGGCCAAGGCTATCATGGATTT...ACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp ATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGAAATCCATGATAGCCTaGGCCATTAATTTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: MSLYNLQAVFPTTRRRNMKSMIA*AINFPK
Trigger: CTTAGGAAAATTAATGGCCAAGGCTATCATGGATTT...CATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAGATACTCCTCTAAATaGTGGATAGTGACTGGTATA +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRRYSSK*WIVTGI
Trigger: TATACCAGTCACTATCCACAATTTAGAGGAGTATCT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTCATCTGGGTTTTCTGTaGATTCAAACGTCTTTCGGA +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSHLGFL*IQTSFG
Trigger: TCCGAAAGACGTTTGAATCAACAGAAAACCCAGATG...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATCATCTGGGTTTTCTGTaGATTCAAACGTCTTTCGGA +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYHLGFL*IQTSFG
Trigger: TCCGAAAGACGTTTGAATCAACAGAAAACCCAGATG...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATGTACAAGAGTTGTCTTaGGAGGAAAGAAAACTGCAG +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYVQELS*EERKLQ
Trigger: CTGCAGTTTTCTTTCCTCCAAAGACAACTCTTGTAC...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATAATGACTGGACAGCATaGCTTACAGGTGCTTTTATC +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYNDWTA*LTGAFI
Trigger: GATAAAAGCACCTGTAAGCAATGCTGTCCAGTCATT...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTATCCTTGTGCTTAATTaGCAGGAAGATATCAGAACA +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAILVLN*QEDIRT
Trigger: TGTTCTGATATCTTCCTGCAAATTAAGCACAAGGAT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTAGCATCTTCAGTGATTaGTCACTAGGTTATCCTTTA +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGASIFSD*SLGYPL
Trigger: TAAAGGATAACCTAGTGACAAATCACTGAAGATGCT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp AACCAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTACAGGAGATCAGCAATaGGTTATAGGTTTGGAAATA +
Preference number: 5 (lower is better)
Translates to: NQMSLYNLQAVFPTTRRRTGDQQ*VIGLEI
Trigger: TATTTCCAAACCTATAACCAATTGCTGATCTCCTGT...ACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GTGTGGAAAATCAAGAGTTGTGGATCTAATTTCTTGGATACTGAAGTTGGTGCTATACACATCTGTAGTTaGAGGTTCCATTATTCCAAC +
Preference number: 5 (lower is better)
Translates to: VWKIKSCGSNFLDTEVGAIHICS*RFHYSN
Trigger: GTTGGAATAATGGAACCTCAAACTACAGATGTGTAT...AGCACCAACTTCAGTATCCAAGAAATTAGATCCACAACTCTTGATTTTCCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp CAAATGTCTCTTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATACACATCTGTAGTTaGAGGTTCCATTATTCCAAC +
Preference number: 5 (lower is better)
Translates to: QMSLYNLQAVFPTTRRRNIHICS*RFHYSN
Trigger: GTTGGAATAATGGAACCTCAAACTACAGATGTGTAT...GTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAAGAGACATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTGTTCCCGTGTCCTCATaGATTTGCTGCATAGAATTA +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSVPVSS*ICCIEL
Trigger: TAATTCTATGCAGCAAATCAATGAGGACACGGGAAC...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTATATCCCTTATGTTTaGCCTGCCCTAAATGTGACC +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSYIPYV*PALNVT
Trigger: GGTCACATTTAGGGCAGGCAAAACATAAGGGATATA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTCGTTTCTGCAATGTTTaGTTTCATAAGTTGAACAGC +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLRFCNV*FHKLNS
Trigger: GCTGTTCAACTTATGAAACAAAACATTGCAGAAACG...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283943.9
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTAAACTTCTAAAGGATTaGATACTGATGGGCACACTC +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSKLLKD*ILMGTL
Trigger: GAGTGTGCCCATCAGTATCAAATCCTTTAGAAGTTT...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTACTGTAGACTCTCTTaGGTCTGGGATTTATCTTGT +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYYCRLS*VWDLSC
Trigger: ACAAGATAAATCCCAGACCAAAGAGAGTCTACAGTA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp GATCACTTTAAGTCCATGGGGCCATTAATGAATATCAACCAAATGTCTCTTTATTCTGAACGAATCAAATaGCCTAGAAACGCCTTCATT +
Preference number: 5 (lower is better)
Translates to: DHFKSMGPLMNINQMSLYSERIK*PRNAFI
Trigger: AATGAAGGCGTTTCTAGGCAATTTGATTCGTTCAGA...ATAAAGAGACATTTGGTTGATATTCATTAATGGCCCCATGGACTTAAAGTGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTTCCTCCAAAAAGGATTaGGCATATGAATGCACTTTT +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLSSKKD*AYECTF
Trigger: AAAAGTGCATTCATATGCCAAATCCTTTTTGGAGGA...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTATAATCTGCAAGCCGTTTTTCCTACAACAAGAAGGCGTAACATGTTTCCTTAGCATCTTCAGTGATTaGTCACTAGGTTATCCTTTA +
Preference number: 5 (lower is better)
Translates to: FIICKPFFLQQEGVTCFLSIFSD*SLGYPL
Trigger: TAAAGGATAACCTAGTGACAAATCACTGAAGATGCT...AAGGAAACATGTTACGCCTTCTTGTTGTAGGAAAAACGGCTTGCAGATTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTGGAAGCAATGTGACTaGAAACAGCATGATTTTTCA +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSWKQCD*KQHDFS
Trigger: TGAAAAATCATGCTGTTTCAAGTCACATTGCTTCCA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTATCCTTGTGCTTAATTaGCAGGAAGATATCAGAACA +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSILVLN*QEDIRT
Trigger: TGTTCTGATATCTTCCTGCAAATTAAGCACAAGGAT...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS-3UTR CAA 90 bp TTTCAAGGAGATGAATTATGGAAAATTCCTTCAAATTTATGCCACAGGCCTAGTTCCTCCAAAAAGGATTaGGCATATGAATGCACTTTT +
Preference number: 5 (lower is better)
Translates to: FQGDELWKIPSNLCHRPSSSKKD*AYECTF
Trigger: AAAAGTGCATTCATATGCCAAATCCTTTTTGGAGGA...ACTAGGCCTGTGGCATAAATTTGAAGGAATTTTCCATAATTCATCTCCTTGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283943.9
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp TACCATTCACCCGGTTCTGTGAAGGGCCCTCCTCATTaGGGGAAGCCGGAGGAGGGACCCAGCGACCCCTAC +
Preference number: 6 (lower is better)
Translates to: YHSPGSVKGPPH*GKPEEGPSDPY
Trigger: GTAGGGGTCGCTGGGTCCCTCCTCCGGCTTCCCGCAATGAGGAGGGCCCTTCACAGAACCGGGTGAATGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430954.5
CDS CAA 72 bp CTACCATTCACCCGGTTCTGTGAAGGGCCCTCCTCATaGCGGGAAGCCGGAGGAGGGACCCAGCGACCCCTA +
Preference number: 6 (lower is better)
Translates to: LPFTRFCEGPSS*REAGGGTQRPL
Trigger: TAGGGGTCGCTGGGTCCCTCCTCCGGCTTCCCGCAATGAGGAGGGCCCTTCACAGAACCGGGTGAATGGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430954.5
CDS CAA 90 bp GCCAGAGCCTCGCCGACTGGTACTAGCACAGGAGCCCGTGGTCTTTaGGCGTGTGCTCCGCCTCAAACTGGGGAGCTCAGCAGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: ARASPTGTSTGARGL*ACAPPQTGELSRWR
Trigger: TCTCCACCTGCTGAGCTCCCCAGTTTGAGGCGGAGCACACGCCAAAAGACCACGGGCTCCTGTGCTAGTACCAGTCGGCGAGGCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp CGCCGACTGGTACTAGCACAGGAGCCCGTGGTCTTTTaGCGTGTGCTCCGCCTCAAACTGGGGAGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: RRLVLAQEPVVF*RVLRLKLGSSA
Trigger: TGCTGAGCTCCCCAGTTTGAGGCGGAGCACACGCCAAAAGACCACGGGCTCCTGTGCTAGTACCAGTCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp TCGCCGACTGGTACTAGCACAGGAGCCCGTGGTCTTTaGGCGTGTGCTCCGCCTCAAACTGGGGAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SPTGTSTGARGL*ACAPPQTGELS
Trigger: GCTGAGCTCCCCAGTTTGAGGCGGAGCACACGCCAAAAGACCACGGGCTCCTGTGCTAGTACCAGTCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp GGGTCTGCCATTTTCTCCTGTCGACGAGCTTCAGCTGCTCCTCTTTaGCCCAGGCCAGAGCCTCGCCGACTGGTACTAGCACAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: GSAIFSCRRASAAPL*PRPEPRRLVLAQEP
Trigger: GGGCTCCTGTGCTAGTACCAGTCGGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGAAGCTCGTCGACAGGAGAAAATGGCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp AGGGTCTGCCATTTTCTCCTGTCGACGAGCTTCAGCTaGTCCTCTTTTGCCCAGGCCAGAGCCTCGCCGACT +
Preference number: 6 (lower is better)
Translates to: RVCHFLLSTSFS*SSFAQARASPT
Trigger: AGTCGGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGAAGCTCGTCGACAGGAGAAAATGGCAGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp GGCAGCCCTGGCAAGGCCACTACCTCCCGCAGTCCGTaGTGGCTCAATGTTGTTGCTGTTGGACTGTGTACT +
Preference number: 6 (lower is better)
Translates to: GSPGKATTSRSP*WLNVVAVGLCT
Trigger: AGTACACAGTCCAACAGCAACAACATTGAGCCAGCACGGACTGCGGGAGGTAGTGGCCTTGCCAGGGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp AGCCCGTGGTCTTTTGGCGTGTGCTCCGCCTCAAACTaGGGAGCTCAGCAGGTGGAGACTCACTGCGTTTCT +
Preference number: 6 (lower is better)
Translates to: SPWSFGVCSASN*GAQQVETHCVS
Trigger: AGAAACGCAGTGAGTCTCCACCTGCTGAGCTCCCCAGTTTGAGGCGGAGCACACGCCAAAAGACCACGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp CCTCGCCGACTTCCTCCTATTGAGTCGTCTTGTGGTTaGGCCCCGGCAGTGTTCCTCTGTGAACGTCGCAGT +
Preference number: 6 (lower is better)
Translates to: PRRLPPIESSCG*APAVFLCERRS
Trigger: ACTGCGACGTTCACAGAGGAACACTGCCGGGGCCCAACCACAAGACGACTCAATAGGAGGAAGTCGGCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389045.7
CDS CAA 90 bp GGGTCTGCCATTTTCTCCTGTCGACGAGCTTCAGCTGCTCCTCTTTaGCCCAGGCCAGAGCCTCGCCGACTTCCTCCTATTGAGTCGTCT +
Preference number: 6 (lower is better)
Translates to: GSAIFSCRRASAAPL*PRPEPRRLPPIESS
Trigger: AGACGACTCAATAGGAGGAAGTCGGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGAAGCTCGTCGACAGGAGAAAATGGCAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389045.7
CDS CCA 72 bp ACCTCTGTTCCTTTTCCCTGCTACTTCTTCTGGGGCTaGGACTGGACGCTGAACGGGAACGCCTGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: TSVPFPCYFFWG*DWTLNGNAWPC
Trigger: ACAAGGCCAGGCGTTCCCGTTCAGCGTCCAGTCCCAGCCCCAGAAGAAGTAGCAGGGAAAAGGAACAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453485.1
CDS TCA 72 bp TTCCCTGCTACTTCTTCTGGGGCTGGGACTGGACGCTaGACGGGAACGCCTGGCCTTGTTCTGATCTTTTCC +
Preference number: 6 (lower is better)
Translates to: FPATSSGAGTGR*TGTPGLVLIFS
Trigger: GGAAAAGATCAGAACAAGGCCAGGCGTTCCCGTTCAGCGTCCAGTCCCAGCCCCAGAAGAAGTAGCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp CTGCAGCATGAGTGGCAGCTGTGGCTGTCCCACTGCTaGCTGAAGTTGTGGATCCCATGGATCCCGATCCAT +
Preference number: 6 (lower is better)
Translates to: LQHEWQLWLSHC*LKLWIPWIPIH
Trigger: ATGGATCGGGATCCATGGGATCCACAACTTCAGTCAGCAGTGGGACAGCCACAGCTGCCACTCATGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000487178.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp TGGATTTCTAACATGGCCCGTGAGCTGCCGAGGTCCTaGATCACAGACTCCGCCTGTTTCAGCAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: WISNMARELPRS*ITDSACFSSSS
Trigger: AGAGGAGCTGCTGAAACAGGCGGAGTCTGTGATGCAGGACCTCGGCAGCTCACGGGCCATGTTAGAAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp CTGCAGCTTCTTCCTCCTATTGAGTCGTCTTGTGGTTaGGCCCCGGCAGTGTTCCTCTGTGAACGTCGCAGT +
Preference number: 6 (lower is better)
Translates to: LQLLPPIESSCG*APAVFLCERRS
Trigger: ACTGCGACGTTCACAGAGGAACACTGCCGGGGCCCAACCACAAGACGACTCAATAGGAGGAAGAAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283943.9
ENST00000343290.5
ENST00000428959.5
ENST00000435716.5
ENST00000479037.5
CDS CCA 72 bp GTTCCTTTTCCCTGCTACTTCTTCTGGGGCTGGGACTaGACGCTGAACGGGAACGCCTGGCCTTGTTCTGAT +
Preference number: 6 (lower is better)
Translates to: VPFPCYFFWGWD*TLNGNAWPCSD
Trigger: ATCAGAACAAGGCCAGGCGTTCCCGTTCAGCGTCCAGTCCCAGCCCCAGAAGAAGTAGCAGGGAAAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp TACTCTGTTCCTTTTCCCTGCTACTTCTTCTGGGGCTaGGACTGGACGCTGAACGGGAACGCCTGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: YSVPFPCYFFWG*DWTLNGNAWPC
Trigger: ACAAGGCCAGGCGTTCCCGTTCAGCGTCCAGTCCCAGCCCCAGAAGAAGTAGCAGGGAAAAGGAACAGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp CTCTATTATTGGAGATGGTATCCTTTGAGGCAGCCCTaGCAAGGCCACTACCTCCCGCAGTCCGTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: LYYWRWYPLRQP*QGHYLPQSVLA
Trigger: AGCCAGCACGGACTGCGGGAGGTAGTGGCCTTGCCAGGGCTGCCTCAAAGGATACCATCTCCAATAATAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp GGCTGCCTCAATGATCCGGCTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATCATCACGCCACTGCCA +
Preference number: 6 (lower is better)
Translates to: GCLNDPAVNPVI*MPEAPIITPLP
Trigger: TGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389045.7
ENST00000675423.1
ENST00000675903.1
CDS CCA 72 bp CCTTCTCTGACCCTCGCTTCCCACAACTGTTGTCACTaGAGCTGCTTCCTAGTTTCCATTTCCGGGCCGTCC +
Preference number: 6 (lower is better)
Translates to: PSLTLASHNCCH*SCFLVSISGPS
Trigger: GGACGGCCCGGAAATGGAAACTAGGAAGCAGCTCCAGTGACAACAGTTGTGGGAAGCGAGGGTCAGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675423.1
CDS TCA 72 bp AGCATGAGTGGCAGCTGTGGCTGTCCCACTGCTGACTaGAGTTGTGGATCCCATGGATCCCGATCCATTCGT +
Preference number: 6 (lower is better)
Translates to: SMSGSCGCPTAD*SCGSHGSRSIR
Trigger: ACGAATGGATCGGGATCCATGGGATCCACAACTTCAGTCAGCAGTGGGACAGCCACAGCTGCCACTCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000487178.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp TCTGACTCCGTGAACCGCCAGTGGCCCCACTCTTCCTaGTATGAGCCTTGCTTGTTGATGGTGATTGTGCAG +
Preference number: 6 (lower is better)
Translates to: SDSVNRQWPHSS*YEPCLLMVIVQ
Trigger: CTGCACAATCACCATCAACAAGCAAGGCTCATACCAGGAAGAGTGGGGCCACTGGCGGTTCACGGAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000428959.5
ENST00000430954.5
ENST00000435716.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp CAGTTTTACTCTGTTCCTTTTCCCTGCTACTTCTTCTaGGGCTGGGACTGGACGCTGAACGGGAACGCCTGG +
Preference number: 6 (lower is better)
Translates to: QFYSVPFPCYFF*GWDWTLNGNAW
Trigger: CCAGGCGTTCCCGTTCAGCGTCCAGTCCCAGCCCCAGAAGAAGTAGCAGGGAAAAGGAACAGAGTAAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp GCCCTGGCAAGGCCACTACCTCCCGCAGTCCGTGCTGGCTCAATGTaGTTGCTGTTGGACTGTGTACTTAACCTTCCCCATGTTTTTGGA +
Preference number: 6 (lower is better)
Translates to: ALARPLPPAVRAGSM*LLLDCVLNLPHVFG
Trigger: TCCAAAAACATGGGGAAGGTTAAGTACACAGTCCAACAGCAACAACATTGAGCCAGCACGGACTGCGGGAGGTAGTGGCCTTGCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp CTCCGTGAACCGCCAGTGGCCCCACTCTTCCTGGTATaGGCCTTGCTTGTTGATGGTGATTGTGCAGATTTC +
Preference number: 6 (lower is better)
Translates to: LREPPVAPLFLV*ALLVDGDCADF
Trigger: GAAATCTGCACAATCACCATCAACAAGCAAGGCTCATACCAGGAAGAGTGGGGCCACTGGCGGTTCACGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000428959.5
ENST00000430954.5
ENST00000435716.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp GCCTCAATGATCCGGCTGTCAATCCTGTTATATGGATaGCAGAGGCCCCGATCATCACGCCACTGCCATATC +
Preference number: 6 (lower is better)
Translates to: ASMIRLSILLYG*QRPRSSRHCHI
Trigger: GATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389045.7
ENST00000675423.1
ENST00000675903.1
CDS GCA 72 bp GTCCTGGGGATGTGGAAGGTCTCAAGCCATAGCGTGTaGAGCCAGAAGCAAGGTACAATCAGGCAAAGTCCT +
Preference number: 6 (lower is better)
Translates to: VLGMWKVSSHSV*SQKQGTIRQSP
Trigger: AGGACTTTGCCTGATTGTACCTTGCTTCTGGCTGCACACGCTATGGCTTGAGACCTTCCACATCCCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459841.1
CDS CCA 72 bp AAATGTGACCTTCCTCCTATTGAGTCGTCTTGTGGTTaGGCCCCGGCAGTGTTCCTCTGTGAACGTCGCAGT +
Preference number: 6 (lower is better)
Translates to: KCDLPPIESSCG*APAVFLCERRS
Trigger: ACTGCGACGTTCACAGAGGAACACTGCCGGGGCCCAACCACAAGACGACTCAATAGGAGGAAGGTCACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389044.8
ENST00000409677.5
ENST00000430954.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp GAGAAGCTAGTGCCTTGTAAAGCAGCCTTCATGCAGTaGTCCTGGGGATGTGGAAGGTCTCAAGCCATAGCG +
Preference number: 6 (lower is better)
Translates to: EKLVPCKAAFMQ*SWGCGRSQAIA
Trigger: CGCTATGGCTTGAGACCTTCCACATCCCCAGGACCACTGCATGAAGGCTGCTTTACAAGGCACTAGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459841.1
CDS CCA 72 bp TGCTACCTCAATGATCCGGCTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATCATCACGCCACTGCCA +
Preference number: 6 (lower is better)
Translates to: CYLNDPAVNPVI*MPEAPIITPLP
Trigger: TGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGGTAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675453.1
CDS CAA 72 bp AGGCCACTACCTCCCGCAGTCCGTGCTGGCTCAATGTaGTTGCTGTTGGACTGTGTACTTAACCTTCCCCAT +
Preference number: 6 (lower is better)
Translates to: RPLPPAVRAGSM*LLLDCVLNLPH
Trigger: ATGGGGAAGGTTAAGTACACAGTCCAACAGCAACAACATTGAGCCAGCACGGACTGCGGGAGGTAGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp TTATATGGATGCCAGAGGCCCCGATCATCACGCCACTaGCATATCGCACCATCTGTGTTCTGTGCATTTCCC +
Preference number: 6 (lower is better)
Translates to: LYGCQRPRSSRH*HIAPSVFCAFP
Trigger: GGGAAATGCACAGAACACAGATGGTGCGATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp TGCTCAATGATCCGGCTGTCAATCCTGTTATATGGATaGCAGAGGCCCCGATCATCACGCCACTGCCATATC +
Preference number: 6 (lower is better)
Translates to: CSMIRLSILLYG*QRPRSSRHCHI
Trigger: GATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283943.9
ENST00000389044.8
CDS GCA 72 bp ACCTCAATGATCCGGCTGTCAATCCTGTTATATGGATaGCAGAGGCCCCGATCATCACGCCACTGCCATATC +
Preference number: 6 (lower is better)
Translates to: TSMIRLSILLYG*QRPRSSRHCHI
Trigger: GATATGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479037.5
ENST00000675453.1
CDS CCA 72 bp CTTGTTCTGATCTTTTCCTTGTTTCACTCTGGCACCTaGTGGTACAGTGGAGGAGGCCGAGGCTACAGCAGA +
Preference number: 6 (lower is better)
Translates to: LVLIFSLFHSGT*WYSGGGRGYSR
Trigger: TCTGCTGTAGCCTCGGCCTCCTCCACTGTACCACCAGGTGCCAGAGTGAAACAAGGAAAAGATCAGAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp GATTTGCTCAATGATCCGGCTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATCATCACGCCACTGCCA +
Preference number: 6 (lower is better)
Translates to: DLLNDPAVNPVI*MPEAPIITPLP
Trigger: TGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283943.9
ENST00000389044.8
CDS CCA 72 bp GTACCAAATTCCAGTGGCAAGGGTATAGCCAGGCAATaGTCCTTACCTGCCTCCTGTCCCATTTCCACTAGG +
Preference number: 6 (lower is better)
Translates to: VPNSSGKGIARQ*SLPASCPISTR
Trigger: CCTAGTGGAAATGGGACAGGAGGCAGGTAAGGACCATTGCCTGGCTATACCCTTGCCACTGGAATTTGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461189.1
CDS CCA 72 bp TACTACCTCAATGATCCGGCTGTCAATCCTGTTATATaGATGCCAGAGGCCCCGATCATCACGCCACTGCCA +
Preference number: 6 (lower is better)
Translates to: YYLNDPAVNPVI*MPEAPIITPLP
Trigger: TGGCAGTGGCGTGATGATCGGGGCCTCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGGTAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479037.5
CDS CAA 72 bp CCACTACCTCCCGCAGTCCGTGCTGGCTCAATGTTGTaGCTGTTGGACTGTGTACTTAACCTTCCCCATGTT +
Preference number: 6 (lower is better)
Translates to: PLPPAVRAGSML*LLDCVLNLPHV
Trigger: AACATGGGGAAGGTTAAGTACACAGTCCAACAGCAACAACATTGAGCCAGCACGGACTGCGGGAGGTAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp TCCGTGAACCGCCAGTGGCCCCACTCTTCCTGGTATGAGCCTTGCTaGTTGATGGTGATTGTGCAGATTTCAGTTGTTGCTCCTGGTCTA +
Preference number: 6 (lower is better)
Translates to: SVNRQWPHSSWYEPC*LMVIVQISVVAPGL
Trigger: TAGACCAGGAGCAACAACTGAAATCTGCACAATCACCATCAACAAGCAAGGCTCATACCAGGAAGAGTGGGGCCACTGGCGGTTCACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000428959.5
ENST00000430954.5
ENST00000435716.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp CTGGCAAGGCCACTACCTCCCGCAGTCCGTGCTGGCTCAATGTTGTaGCTGTTGGACTGTGTACTTAACCTTCCCCATGTTTTTGGATTC +
Preference number: 6 (lower is better)
Translates to: LARPLPPAVRAGSML*LLDCVLNLPHVFGF
Trigger: GAATCCAAAAACATGGGGAAGGTTAAGTACACAGTCCAACAGCAACAACATTGAGCCAGCACGGACTGCGGGAGGTAGTGGCCTTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp CCCCCTGGATTGTTATTAGGCCGGTTGGACATTGGCACCTCTCTCTaGAAGGGACATACCCTTTCTAGACACTACCATTCACCCGGTTCT +
Preference number: 6 (lower is better)
Translates to: PPGLLLGRLDIGTSL*KGHTLSRHYHSPGS
Trigger: AGAACCGGGTGAATGGTAGTGTCTAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAATGTCCAACCGGCCTAATAACAATCCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430954.5
CDS CAA 90 bp CCCCCTGGATTGTTATTAGGCCGGTTGGACATTGGCACCTCTCTCTaGAAGGGACATACCCTTTCTAGACACTACCATTCACTGTGGTCC +
Preference number: 6 (lower is better)
Translates to: PPGLLLGRLDIGTSL*KGHTLSRHYHSLWS
Trigger: GGACCACAGTGAATGGTAGTGTCTAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAATGTCCAACCGGCCTAATAACAATCCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675423.1
CDS TCA 72 bp TCTCGATGGCTTGTACCAAAGCCAGAGGGTCAATCTTaGCAGGTCCACCCTTCCACTGCTTCACATTTGCAC +
Preference number: 6 (lower is better)
Translates to: SRWLVPKPEGQS*QVHPSTASHLH
Trigger: GTGCAAATGTGAAGCAGTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGCTTTGGTACAAGCCATCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000495322.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp CACTACCTCCCGCAGTCCGTGCTGGCTCAATGTTGTTaGTGTTGGACTGTGTACTTAACCTTCCCCATGTTT +
Preference number: 6 (lower is better)
Translates to: HYLPQSVLAQCC*CWTVYLTFPMF
Trigger: AAACATGGGGAAGGTTAAGTACACAGTCCAACAGCAACAACATTGAGCCAGCACGGACTGCGGGAGGTAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp AGCTCCACCATCCACCTGGAGGTTGAGTTGTTCGGTTaGAGCACAAAGTCTCTGAAGGACATTCAATGCAGG +
Preference number: 6 (lower is better)
Translates to: SSTIHLEVELFG*STKSLKDIQCR
Trigger: CCTGCATTGAATGTCCTTCAGAGACTTTGTGCTGCAACCGAACAACTCAACCTCCAGGTGGATGGTGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp GCCAGAGGGTCAATCTTGACAGGTCCACCCTTCCACTaGTTCACATTTGCACAGTCTGGATGCCTTTGTAAC +
Preference number: 6 (lower is better)
Translates to: ARGSILTGPPFH*FTFAQSGCLCN
Trigger: GTTACAAAGGCATCCAGACTGTGCAAATGTGAAGCAGTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000495322.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp CATTTTCATACTGGATTTCTAACATGGCCCGTGAGCTaGCGAGGTCCTGCATCACAGACTCCGCCTGTTTCA +
Preference number: 6 (lower is better)
Translates to: HFHTGFLTWPVS*RGPASQTPPVS
Trigger: TGAAACAGGCGGAGTCTGTGATGCAGGACCTCGGCAGCTCACGGGCCATGTTAGAAATCCAGTATGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp CCATCAGTGTCTTTGCATCCCAAGTGTCTGCTTTACTaGCACAAAGGAGCTGATCCAGTTCCTCCGGGTAGA +
Preference number: 6 (lower is better)
Translates to: PSVSLHPKCLLY*HKGADPVPPGR
Trigger: TCTACCCGGAGGAACTGGATCAGCTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCAAAGACACTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp CGCCAGTGGCCCCACTCTTCCTGGTATGAGCCTTGCTaGTTGATGGTGATTGTGCAGATTTCAGTTGTTGCT +
Preference number: 6 (lower is better)
Translates to: RQWPHSSWYEPC*LMVIVQISVVA
Trigger: AGCAACAACTGAAATCTGCACAATCACCATCAACAAGCAAGGCTCATACCAGGAAGAGTGGGGCCACTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000428959.5
ENST00000430954.5
ENST00000435716.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp CTCTCGATGGCTTGTACCAAAGCCAGAGGGTCAATCTaGACAGGTCCACCCTTCCACTGCTTCACATTTGCA +
Preference number: 6 (lower is better)
Translates to: LSMACTKARGSI*TGPPFHCFTFA
Trigger: TGCAAATGTGAAGCAGTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGCTTTGGTACAAGCCATCGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000495322.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp CCTACCAAAGGGAAGCGCAAACAGGCCCTGGAGGTTTaGAATATACTTGGTCCCTTCTTGGCTCCCTTTTGG +
Preference number: 6 (lower is better)
Translates to: PTKGKRKQALEV*NILGPFLAPFW
Trigger: CCAAAAGGGAGCCAAGAAGGGACCAAGTATATTCAAAACCTCCAGGGCCTGTTTGCGCTTCCCTTTGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp AGGCCACTACCTCCCGCAGTCCGTGCTGGCTCAATGTTGTTGCTGTaGGACTGTGTACTTAACCTTCCCCATGTTTTTGGATTCAAGCTT +
Preference number: 6 (lower is better)
Translates to: RPLPPAVRAGSMLLL*DCVLNLPHVFGFKL
Trigger: AAGCTTGAATCCAAAAACATGGGGAAGGTTAAGTACACAGTCCAACAGCAACAACATTGAGCCAGCACGGACTGCGGGAGGTAGTGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp ACAAGGTATCTCTCGATGGCTTGTACCAAAGCCAGAGGGTCAATCTaGACAGGTCCACCCTTCCACTGCTTCACATTTGCACAGTCTGGA +
Preference number: 6 (lower is better)
Translates to: TRYLSMACTKARGSI*TGPPFHCFTFAQSG
Trigger: TCCAGACTGTGCAAATGTGAAGCAGTGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGCTTTGGTACAAGCCATCGAGAGATACCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000495322.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp CCCCCTGGATTGTTATTAGGCCGGTTGGACATTGGCACCTCTCTCTaGAAGGGACATACCCTTTCTAGACACTACCATTCATGCGGTCTA +
Preference number: 6 (lower is better)
Translates to: PPGLLLGRLDIGTSL*KGHTLSRHYHSCGL
Trigger: TAGACCGCATGAATGGTAGTGTCTAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAATGTCCAACCGGCCTAATAACAATCCAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428959.5
CDS CCA 72 bp TCATCTGTCCGAGCAGCTGAAGAATTTACTGCCTCCTaGTTGCTTTCAGGGTCTGCCATTTTCTCCTGTCGA +
Preference number: 6 (lower is better)
Translates to: SSVRAAEEFTAS*LLSGSAIFSCR
Trigger: TCGACAGGAGAAAATGGCAGACCCTGAAAGCAACCAGGAGGCAGTAAATTCTTCAGCTGCTCGGACAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp GGAGTCCCTTCTATCCCATTGAAAGTGTGCGGGTGGTaGTATAAAAATGTTTCAGCTGCTCTGCGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: GVPSIPLKVCGW*YKNVSAALRFS
Trigger: GCTGAAGCGCAGAGCAGCTGAAACATTTTTATACCACCACCCGCACACTTTCAATGGGATAGAAGGGACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435716.5
CDS CAA 90 bp CCCCCTGGATTGTTATTAGGCCGGTTGGACATTGGCACCTCTCTCTaGAAGGGACATACCCTTTCTAGACACTACCATTCACTAGTTAGG +
Preference number: 6 (lower is better)
Translates to: PPGLLLGRLDIGTSL*KGHTLSRHYHSLVR
Trigger: CCTAACTAGTGAATGGTAGTGTCTAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAATGTCCAACCGGCCTAATAACAATCCAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000409677.5
ENST00000479037.5
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp CTTTGCTGTCCTACCAAAGGGAAGCGCAAACAGGCCCTGGAGGTTTaGAATATACTTGGTCCCTTCTTGGCTCCCTTTTGGATTGCTAAG +
Preference number: 6 (lower is better)
Translates to: LCCPTKGKRKQALEV*NILGPFLAPFWIAK
Trigger: CTTAGCAATCCAAAAGGGAGCCAAGAAGGGACCAAGTATATTCAAAACCTCCAGGGCCTGTTTGCGCTTCCCTTTGGTAGGACAGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp CCCCCTGGATTGTTATTAGGCCGGTTGGACATTGGCACCTCTCTCTaGAAGGGACATACCCTTTCTAGACACTACCATTCACTTTTGGAG +
Preference number: 6 (lower is better)
Translates to: PPGLLLGRLDIGTSL*KGHTLSRHYHSLLE
Trigger: CTCCAAAAGTGAATGGTAGTGTCTAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAATGTCCAACCGGCCTAATAACAATCCAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435716.5
CDS TCA 72 bp CTTGGTAGGTTTCGCAGATCTCTCTTCTGCACCAGTTaGTTCAGACCCGGAGCCACTCTTTACACAAGAACT +
Preference number: 6 (lower is better)
Translates to: LGRFRRSLFCTS*FRPGATLYTRT
Trigger: AGTTCTTGTGTAAAGAGTGGCTCCGGGTCTGAATCAACTGGTGCAGAAGAGAGATCTGCGAAACCTACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000453485.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp AAACTTCATCTTAACCTTTGCGATATGAGCTGGCTTTaGTGTCCTACCAAAGGGAAGCGCAAACAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: KLHLNLCDMSWL*CPTKGKRKQAL
Trigger: CAGGGCCTGTTTGCGCTTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATCGCAAAGGTTAAGATGAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000459841.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp ACCATGATCAGGCCTACAGCATTCCATCAGTGTCTTTaGATCCCAAGTGTCTGCTTTACTGCCACAAAGGAG +
Preference number: 6 (lower is better)
Translates to: TMIRPTAFHQCL*IPSVCFTATKE
Trigger: CTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCAAAGACACTGATGGAATGCTGTAGGCCTGATCATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000418123.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp TTTTGCAGAGCTAGGAGAATTGGTCCTGTTGTAGTCTaGACTAGCACTGCGCTTCACTCCTCGAGAATTGTC +
Preference number: 6 (lower is better)
Translates to: FCRARRIGPVVV*TSTALHSSRIV
Trigger: GACAATTCTCGAGGAGTGAAGCGCAGTGCTAGTCCAGACTACAACAGGACCAATTCTCCTAGCTCTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000283943.9
ENST00000343290.5
ENST00000389044.8
ENST00000409677.5
ENST00000428959.5
ENST00000430954.5
ENST00000435716.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp TGGGCCTTAGAACTAGCTCCACTTCCAATTGTTCTATaGAAAAGCTGTGACATCCGAGGACCAAGAGGACCA +
Preference number: 6 (lower is better)
Translates to: WALELAPLPIVL*KSCDIRGPRGP
Trigger: TGGTCCTCTTGGTCCTCGGATGTCACAGCTTTTCCATAGAACAATTGGAAGTGGAGCTAGTTCTAAGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp TCCATACCCTCTAACTACAAGGTATCTCTCGATGGCTaGTACCAAAGCCAGAGGGTCAATCTTGACAGGTCC +
Preference number: 6 (lower is better)
Translates to: SIPSNYKVSLDG*YQSQRVNLDRS
Trigger: GGACCTGTCAAGATTGACCCTCTGGCTTTGGTACAAGCCATCGAGAGATACCTTGTAGTTAGAGGGTATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000495322.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp TCTTACTCTTCCATACCCTCTAACTACAAGGTATCTCTCGATGGCTaGTACCAAAGCCAGAGGGTCAATCTTGACAGGTCCACCCTTCCA +
Preference number: 6 (lower is better)
Translates to: SYSSIPSNYKVSLDG*YQSQRVNLDRSTLP
Trigger: TGGAAGGGTGGACCTGTCAAGATTGACCCTCTGGCTTTGGTACAAGCCATCGAGAGATACCTTGTAGTTAGAGGGTATGGAAGAGTAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000495322.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp CATGAGTATAACCATGATCAGGCCTACAGCATTCCATCAGTGTCTTaGCATCCCAAGTGTCTGCTTTACTGCCACAAAGGAGCTGATCCA +
Preference number: 6 (lower is better)
Translates to: HEYNHDQAYSIPSVS*HPKCLLYCHKGADP
Trigger: TGGATCAGCTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCAAAGACACTGATGGAATGCTGTAGGCCTGATCATGGTTATACTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000418123.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp CCTTACCTGCCTCCTGTCCCATTTCCACTAGGGAAATCATGTACTTaGACTGGAAATTGTTCCATCTGGCTGAGGCAGTTGTTCATCTTG +
Preference number: 6 (lower is better)
Translates to: PYLPPVPFPLGKSCT*TGNCSIWLRQLFIL
Trigger: CAAGATGAACAACTGCCTCAGCCAGATGGAACAATTTCCAGTCAAAGTACATGATTTCCCTAGTGGAAATGGGACAGGAGGCAGGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461189.1
CDS TCA 72 bp TGGAGGTTGAGTTGTTCGGTTGCAGCACAAAGTCTCTaGAGGACATTCAATGCAGGGTTGCTTCCATCCATA +
Preference number: 6 (lower is better)
Translates to: WRLSCSVAAQSL*RTFNAGLLPSI
Trigger: TATGGATGGAAGCAACCCTGCATTGAATGTCCTTCAGAGACTTTGTGCTGCAACCGAACAACTCAACCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp CCTAAGAAGCGAAACTTCATCTTAACCTTTGCGATATaGGCTGGCTTTGCTGTCCTACCAAAGGGAAGCGCA +
Preference number: 6 (lower is better)
Translates to: PKKRNFILTFAI*AGFAVLPKGSA
Trigger: TGCGCTTCCCTTTGGTAGGACAGCAAAGCCAGCTCATATCGCAAAGGTTAAGATGAAGTTTCGCTTCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000459841.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp CCATCAGTGTCTTTGCATCCCAAGTGTCTGCTTTACTaGCACAAAGGAGCTGATCCAGTCTTAGATACTCCT +
Preference number: 6 (lower is better)
Translates to: PSVSLHPKCLLY*HKGADPVLDTP
Trigger: AGGAGTATCTAAGACTGGATCAGCTCCTTTGTGGCAGTAAAGCAGACACTTGGGATGCAAAGACACTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418123.1
CDS CAA 72 bp TGTCTACTTTGTCATCATCTCTTGGAGGTGAGTACTTaGGCCTTCTTGGCCCTCGTTTTGGCAGTCGTTTTC +
Preference number: 6 (lower is better)
Translates to: CLLCHHLLEVST*AFLALVLAVVF
Trigger: GAAAACGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAAGAGATGATGACAAAGTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp CCTCCTGTCCCATTTCCACTAGGGAAATCATGTACTTaGACTGGAAATTGTTCCATCTGGCTGAGGCAGTTG +
Preference number: 6 (lower is better)
Translates to: PPVPFPLGKSCT*TGNCSIWLRQL
Trigger: CAACTGCCTCAGCCAGATGGAACAATTTCCAGTCAAAGTACATGATTTCCCTAGTGGAAATGGGACAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000461189.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp GTGGATTCAAACTCCGGAATCCTCCAACAGGCAATCTaGGGCTACCAGTCACAAACTGGAGAAATAACCTCT +
Preference number: 6 (lower is better)
Translates to: VDSNSGILQQAI*GYQSQTGEITS
Trigger: AGAGGTTATTTCTCCAGTTTGTGACTGGTAGCCCAAGATTGCCTGTTGGAGGATTCCGGAGTTTGAATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp CATCATCTCTTGGAGGTGAGTACTTTGGCCTTCTTGGCCCTCGTTTaGGCAGTCGTTTTCTCTTTAGAACATCACTTAATCGACCTTGAG +
Preference number: 6 (lower is better)
Translates to: HHLLEVSTLAFLALV*AVVFSLEHHLIDLE
Trigger: CTCAAGGTCGATTAAGTGATGTTCTAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAAGAGATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp GAAAAGCTGCCTCCTGTCCCATTTCCACTAGGGAAATCATGTACTTaGACTGGAAATTGTTCCATCTGGCTGAGGCAGTTGTTCATCTTG +
Preference number: 6 (lower is better)
Translates to: EKLPPVPFPLGKSCT*TGNCSIWLRQLFIL
Trigger: CAAGATGAACAACTGCCTCAGCCAGATGGAACAATTTCCAGTCAAAGTACATGATTTCCCTAGTGGAAATGGGACAGGAGGCAGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp CTAGTGTTACTATTGGCTAACGGGTTAGGTTTTCTCTaGATGGCACGTGCTGTTCCCGTGTCCTCATTGATT +
Preference number: 6 (lower is better)
Translates to: LVLLLANGLGFL*MARAVPVSSLI
Trigger: AATCAATGAGGACACGGGAACAGCACGTGCCATTCAGAGAAAACCTAACCCGTTAGCCAATAGTAACACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000487178.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp GAACTGAGCAGCCAGAGACTCATCTATTTCCTCATCTaGTCCATCGTCATCGCTGTCTTCATCATCTTCTCT +
Preference number: 6 (lower is better)
Translates to: ELSSQRLIYFLI*SIVIAVFIIFS
Trigger: AGAGAAGATGATGAAGACAGCGATGACGATGGATCAGATGAGGAAATAGATGAGTCTCTGGCTGCTCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000495322.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp CTTTCTTCAGTTCGATATTGGGAAACCCTGGCAGAGTaGAATCCAGTCCTAGATCTTCAACTGAGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: LSSVRYWETLAE*NPVLDLQLSSH
Trigger: ATGGCTGCTCAGTTGAAGATCTAGGACTGGATTTCACTCTGCCAGGGTTTCCCAATATCGAACTGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000418123.1
ENST00000459841.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp GTTTCTTTTGCTGTAACAGGCAGACACTGCATTTCTTaGTATGATCAGGAAAGATGGAACGACTGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: VSFAVTGRHCIS*YDQERWNDCCP
Trigger: AGGGCAGCAGTCGTTCCATCTTTCCTGATCATAGCAAGAAATGCAGTGTCTGCCTGTTACAGCAAAAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp TTGTTATTAGGCCGGTTGGACATTGGCACCTCTCTCTaGAAGGGACATACCCTTTCTAGACACTACCATTCA +
Preference number: 6 (lower is better)
Translates to: LLLGRLDIGTSL*KGHTLSRHYHS
Trigger: TGAATGGTAGTGTCTAGAAAGGGTATGTCCCTTCAAGAGAGAGGTGCCAATGTCCAACCGGCCTAATAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000283943.9
ENST00000343290.5
ENST00000389044.8
ENST00000389045.7
ENST00000409677.5
ENST00000428959.5
ENST00000430954.5
ENST00000435716.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp TCTGAAGTGCTCCCACTACTATCTTCAGGTCTTGGCTaGACAGCATGGAAGCAATGTGACTTGAAACAGCAT +
Preference number: 6 (lower is better)
Translates to: SEVLPLLSSGLG*TAWKQCDLKQH
Trigger: ATGCTGTTTCAAGTCACATTGCTTCCATGCTGTCAAGCCAAGACCTGAAGATAGTAGTGGGAGCACTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000487178.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp TGTCATCATCTCTTGGAGGTGAGTACTTTGGCCTTCTaGGCCCTCGTTTTGGCAGTCGTTTTCTCTTTAGAA +
Preference number: 6 (lower is better)
Translates to: CHHLLEVSTLAF*ALVLAVVFSLE
Trigger: TTCTAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAAGAGATGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp TGGATAGTGACTGGTATATCCTTCCCTCCTTTCTTCAGTTCGATATaGGGAAACCCTGGCAGAGTGAAATCCAGTCCTAGATCTTCAACT +
Preference number: 6 (lower is better)
Translates to: WIVTGISFPPFFSSI*GNPGRVKSSPRSST
Trigger: AGTTGAAGATCTAGGACTGGATTTCACTCTGCCAGGGTTTCCCAATATCGAACTGAAGAAAGGAGGGAAGGATATACCAGTCACTATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000418123.1
ENST00000459841.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp AATTGTTCCATCTGGCTGAGGCAGTTGTTCATCTTGTaGACTAATGCCAACAAAGGTGCATTACCCACTGGT +
Preference number: 6 (lower is better)
Translates to: NCSIWLRQLFIL*TNANKGALPTG
Trigger: ACCAGTGGGTAATGCACCTTTGTTGGCATTAGTTCACAAGATGAACAACTGCCTCAGCCAGATGGAACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000461189.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp TTCGGTTGCAGCACAAAGTCTCTGAAGGACATTCAATaGAGGGTTGCTTCCATCCATATTCTCAGAACTGAA +
Preference number: 6 (lower is better)
Translates to: FGCSTKSLKDIQ*RVASIHILRTE
Trigger: TTCAGTTCTGAGAATATGGATGGAAGCAACCCTGCATTGAATGTCCTTCAGAGACTTTGTGCTGCAACCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp TCAGGAAAGATGGAACGACTGCTGCCCTTCTCTTGCTaGTATCAACAGTTTTTCACGCATTATCTCAATGCT +
Preference number: 6 (lower is better)
Translates to: SGKMERLLPFSC*YQQFFTHYLNA
Trigger: AGCATTGAGATAATGCGTGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp ATTTCTTGCTATGATCAGGAAAGATGGAACGACTGCTaGCCTTCTCTTGCTGCTATCAACAGTTTTTCACGC +
Preference number: 6 (lower is better)
Translates to: ISCYDQERWNDC*PSLAAINSFSR
Trigger: GCGTGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCATAGCAAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp CCTCCAACAGGCAATCTTGGGCTACCAGTCACAAACTaGAGAAATAACCTCTGCTGCTCATTATCAAAACTA +
Preference number: 6 (lower is better)
Translates to: PPTGNLGLPVTN*RNNLCCSLSKL
Trigger: TAGTTTTGATAATGAGCAGCAGAGGTTATTTCTCCAGTTTGTGACTGGTAGCCCAAGATTGCCTGTTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp TTGGAGGTGAGTACTTTGGCCTTCTTGGCCCTCGTTTaGGCAGTCGTTTTCTCTTTAGAACATCACTTAATC +
Preference number: 6 (lower is better)
Translates to: LEVSTLAFLALV*AVVFSLEHHLI
Trigger: GATTAAGTGATGTTCTAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp TTTCTGCCATCTGAAGTGCTCCCACTACTATCTTCAGGTCTTGGCTaGACAGCATGGAAGCAATGTGACTTGAAACAGCATGATTTTTCA +
Preference number: 6 (lower is better)
Translates to: FLPSEVLPLLSSGLG*TAWKQCDLKQHDFS
Trigger: TGAAAAATCATGCTGTTTCAAGTCACATTGCTTCCATGCTGTCAAGCCAAGACCTGAAGATAGTAGTGGGAGCACTTCAGATGGCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000487178.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp TGTCTACTTTGTCATCATCTCTTGGAGGTGAGTACTTTGGCCTTCTaGGCCCTCGTTTTGGCAGTCGTTTTCTCTTTAGAACATCACTTA +
Preference number: 6 (lower is better)
Translates to: CLLCHHLLEVSTLAF*ALVLAVVFSLEHHL
Trigger: TAAGTGATGTTCTAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAAGAGATGATGACAAAGTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp AGAAGTCATCTGGGTTTTCTGTTGATTCAAACGTCTTTCGGACAATaGTCAAAGGTGGATTCAAACTCCGGAATCCTCCAACAGGCAATC +
Preference number: 6 (lower is better)
Translates to: RSHLGFLLIQTSFGQ*SKVDSNSGILQQAI
Trigger: GATTGCCTGTTGGAGGATTCCGGAGTTTGAATCCACCTTTGACAATTGTCCGAAAGACGTTTGAATCAACAGAAAACCCAGATGACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp CTTTGGGTTAGCAATGGGAGTGAATCTGCCACAAAATaGAATTCATCTGGCGTGATACTCTGGCAGCAATTA +
Preference number: 6 (lower is better)
Translates to: LWVSNGSESATK*NSSGVILWQQL
Trigger: TAATTGCTGCCAGAGTATCACGCCAGATGAATTTCATTTTGTGGCAGATTCACTCCCATTGCTAACCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000477441.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp TCATCTTCAGCCTGTATACTAAACTGCCGTACTGCCTaGTACACAGTCATGTTATACGGCAGCAAATGTTCT +
Preference number: 6 (lower is better)
Translates to: SSSACILNCRTA*YTVMLYGSKCS
Trigger: AGAACATTTGCTGCCGTATAACATGACTGTGTATCAGGCAGTACGGCAGTTTAGTATACAGGCTGAAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp CGGGTAGAAGTACTGAAGATGACTGAGTGGGAAGACTaGTTCAAATCCATCTCTGAACGAATCAAATTGCCT +
Preference number: 6 (lower is better)
Translates to: RVEVLKMTEWED*FKSISERIKLP
Trigger: AGGCAATTTGATTCGTTCAGAGATGGATTTGAATCAGTCTTCCCACTCAGTCATCTTCAGTACTTCTACCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp CATTACAGAGGGCAAGAAGTCATCTGGGTTTTCTGTTaGTTCAAACGTCTTTCGGACAATTGTCAAAGGTGG +
Preference number: 6 (lower is better)
Translates to: HYRGQEVIWVFC*FKRLSDNCQRW
Trigger: CCACCTTTGACAATTGTCCGAAAGACGTTTGAATCAACAGAAAACCCAGATGACTTCTTGCCCTCTGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp AAGGCAGTCAAGGCCTGCTCTGCCACATCAATACACTaGATAACTTGCAGCTGGGAACATATATATAGTTAC +
Preference number: 6 (lower is better)
Translates to: KAVKACSATSIH*ITCSWEHIYSY
Trigger: GTAACTATATATATGTTCCCAGCTGCAAGTTATTCAGTGTATTGATGTGGCAGAGCAGGCCTTGACTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477441.1
CDS GCA 72 bp TCTTTCATCTTCAGCCTGTATACTAAACTGCCGTACTaGCTGATACACAGTCATGTTATACGGCAGCAAATG +
Preference number: 6 (lower is better)
Translates to: SFIFSLYTKLPY*LIHSHVIRQQM
Trigger: CATTTGCTGCCGTATAACATGACTGTGTATCAGGCAGTACGGCAGTTTAGTATACAGGCTGAAGATGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000470302.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp TGCATTTCTTGCTATGATCAGGAAAGATGGAACGACTaGTGCCCTTCTCTTGCTGCTATCAACAGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: CISCYDQERWND*CPSLAAINSFS
Trigger: TGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCATAGCAAGAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp CAGAGATGTCAGTTCATACAACTCTTGAGGGCTTCGTaGAACAAGATCAATCTGTTCCTGACAACTTCCATT +
Preference number: 6 (lower is better)
Translates to: QRCQFIQLLRAS*NKINLFLTTSI
Trigger: AATGGAAGTTGTCAGGAACAGATTGATCTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACTGACATCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp TGTCCCATTTCCACTAGGGAAATCATGTACTTTGACTaGAAATTGTTCCATCTGGCTGAGGCAGTTGTTCAT +
Preference number: 6 (lower is better)
Translates to: CPISTREIMYFD*KLFHLAEAVVH
Trigger: ATGAACAACTGCCTCAGCCAGATGGAACAATTTCCAGTCAAAGTACATGATTTCCCTAGTGGAAATGGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000461189.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp CTGGGTTTTCTGTTGATTCAAACGTCTTTCGGACAATaGTCAAAGGTGGATTCAAACTCCGGAATCCTCCAA +
Preference number: 6 (lower is better)
Translates to: LGFLLIQTSFGQ*SKVDSNSGILQ
Trigger: TTGGAGGATTCCGGAGTTTGAATCCACCTTTGACAATTGTCCGAAAGACGTTTGAATCAACAGAAAACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp ATGATCAGGAAAGATGGAACGACTGCTGCCCTTCTCTaGCTGCTATCAACAGTTTTTCACGCATTATCTCAA +
Preference number: 6 (lower is better)
Translates to: MIRKDGTTAALL*LLSTVFHALSQ
Trigger: TTGAGATAATGCGTGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp ACATGGCATAAGTTCACAAATCAGAGATGTCAGTTCATACAACTCTaGAGGGCTTCGTGGAACAAGATCAATCTGTTCCTGACAACTTCC +
Preference number: 6 (lower is better)
Translates to: TWHKFTNQRCQFIQL*RASWNKINLFLTTS
Trigger: GGAAGTTGTCAGGAACAGATTGATCTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACTGACATCTCTGATTTGTGAACTTATGCCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp GAAAGGTGTCCCCTTGACAGTTCAGAAGTAGTATTAGACTGCACTTaGGGTGCCTTAGAATTAGATTTTCTACTCTCAGGAGGGCTATAT +
Preference number: 6 (lower is better)
Translates to: ERCPLDSSEVVLDCT*GALELDFLLSGGLY
Trigger: ATATAGCCCTCCTGAGAGTAGAAAATCTAATTCTAAGGCACCCAAAGTGCAGTCTAATACTACTTCTGAACTGTCAAGGGGACACCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389044.8
ENST00000409677.5
ENST00000430954.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp AAGGCAGTCAAGGCCTGCTCTGCCACATCAATACACTaGATAACTTGCAGCTTTTCTAAAAAGACAGGAATA +
Preference number: 6 (lower is better)
Translates to: KAVKACSATSIH*ITCSFSKKTGI
Trigger: TATTCCTGTCTTTTTAGAAAAGCTGCAAGTTATTCAGTGTATTGATGTGGCAGAGCAGGCCTTGACTGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp CTGCAATTGCTAATGCATTTCTTTGGGCATTTATGCTaGAGAATTCTAGGTACAGCAAGCAGTCTGCCAAAC +
Preference number: 6 (lower is better)
Translates to: LQLLMHFFGHLC*RILGTASSLPN
Trigger: GTTTGGCAGACTGCTTGCTGTACCTAGAATTCTTCAGCATAAATGCCCAAAGAAATGCATTAGCAATTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000477441.1
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp ACACATTTAAACGGTACGATGAAACTACTACCTCAATaGTCCGGCTGTCAATCCTGTTATATGGATGCCAGA +
Preference number: 6 (lower is better)
Translates to: THLNGTMKLLPQ*SGCQSCYMDAR
Trigger: TCTGGCATCCATATAACAGGATTGACAGCCGGATCATTGAGGTAGTAGTTTCATCGTACCGTTTAAATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479037.5
CDS GCA 72 bp AGGTGTCCCCTTGACAGTTCAGAAGTAGTATTAGACTaGACTTTGGGTGCCTTAGAATTAGATTTTCTACTC +
Preference number: 6 (lower is better)
Translates to: RCPLDSSEVVLD*TLGALELDFLL
Trigger: GAGTAGAAAATCTAATTCTAAGGCACCCAAAGTGCAGTCTAATACTACTTCTGAACTGTCAAGGGGACACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000389044.8
ENST00000409677.5
ENST00000430954.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp GTTGATGGTGATTGTGCAGATTTCAGTTGTTGCTCCTaGTCTAAATGTCTCTTCTTTGACTTACTATGTGGC +
Preference number: 6 (lower is better)
Translates to: VDGDCADFSCCS*SKCLFFDLLCG
Trigger: GCCACATAGTAAGTCAAAGAAGAGACATTTAGACCAGGAGCAACAACTGAAATCTGCACAATCACCATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000428959.5
ENST00000430954.5
ENST00000435716.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp AAGTTCACAAATCAGAGATGTCAGTTCATACAACTCTaGAGGGCTTCGTGGAACAAGATCAATCTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: KFTNQRCQFIQL*RASWNKINLFL
Trigger: CAGGAACAGATTGATCTTGTTCCACGAAGCCCTCAAGAGTTGTATGAACTGACATCTCTGATTTGTGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp GCCCAGAATATAACCAGTCTTAGATACTCCTCTAAATaGTGGATAGTGACTGGTATATCCTTCCCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: AQNITSLRYSSK*WIVTGISFPPF
Trigger: GAAAGGAGGGAAGGATATACCAGTCACTATCCACAATTTAGAGGAGTATCTAAGACTGGTTATATTCTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 72 bp TCATTACAGAGGGCAAGAAGTCATCTGGGTTTTCTGTaGATTCAAACGTCTTTCGGACAATTGTCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: SLQRARSHLGFL*IQTSFGQLSKV
Trigger: CACCTTTGACAATTGTCCGAAAGACGTTTGAATCAACAGAAAACCCAGATGACTTCTTGCCCTCTGTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp TCACACAAGTCATTACAGAGGGCAAGAAGTCATCTGGGTTTTCTGTaGATTCAAACGTCTTTCGGACAATTGTCAAAGGTGGATTCAAAC +
Preference number: 6 (lower is better)
Translates to: SHKSLQRARSHLGFL*IQTSFGQLSKVDSN
Trigger: GTTTGAATCCACCTTTGACAATTGTCCGAAAGACGTTTGAATCAACAGAAAACCCAGATGACTTCTTGCCCTCTGTAATGACTTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp TTTCTTGCTATGATCAGGAAAGATGGAACGACTGCTGCCCTTCTCTaGCTGCTATCAACAGTTTTTCACGCATTATCTCAATGCTTGAAT +
Preference number: 6 (lower is better)
Translates to: FLAMIRKDGTTAALL*LLSTVFHALSQCLN
Trigger: ATTCAAGCATTGAGATAATGCGTGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATCTTTCCTGATCATAGCAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp TCAATGCAGGGTTGCTTCCATCCATATTCTCAGAACTaGAATAACGTTCTACAAATTTATGTGCCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: SMQGCFHPYSQN*NNVLQIYVPAP
Trigger: AGGAGCAGGCACATAAATTTGTAGAACGTTATTTCAGTTCTGAGAATATGGATGGAAGCAACCCTGCATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp GGAGAAATAACCTCTGCTGCTCATTATCAAAACTACTaGGAATCTCAAACAAAAACTTCACAGCCCGACTGT +
Preference number: 6 (lower is better)
Translates to: GEITSAAHYQNY*ESQTKTSQPDC
Trigger: ACAGTCGGGCTGTGAAGTTTTTGTTTGAGATTCTCAGTAGTTTTGATAATGAGCAGCAGAGGTTATTTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000418123.1
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp CACCATCTGTGTTCTGTGCATTTCCCTTCTTCAACATaGTATCAACTGCAAAAATGCCTTCTTTTGGTAAAC +
Preference number: 6 (lower is better)
Translates to: HHLCSVHFPSST*YQLQKCLLLVN
Trigger: GTTTACCAAAAGAAGGCATTTTTGCAGTTGATACCATGTTGAAGAAGGGAAATGCACAGAACACAGATGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CAA 90 bp GCTCCTGGTCTAAATGTCTCTTCTTTGACTTACTATGTGGCTTATTaGTTTCTGAGGGAGATTCAGTATGCTGAAGTGCTTTTGGTTTTT +
Preference number: 6 (lower is better)
Translates to: APGLNVSSLTYYVAY*FLREIQYAEVLLVF
Trigger: AAAAACCAAAAGCACTTCAGCATACTGAATCTCCCTCAGAAACAAATAAGCCACATAGTAAGTCAAAGAAGAGACATTTAGACCAGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000409677.5
ENST00000428959.5
ENST00000430954.5
ENST00000435716.5
ENST00000479037.5
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp TGTTTTCTGGGCCAATCAAGACTTTACCAGACCTCTTaGCATCTTACTTCAGTGAAATTAAGTACCAAATTC +
Preference number: 6 (lower is better)
Translates to: CFLGQSRLYQTS*HLTSVKLSTKF
Trigger: GAATTTGGTACTTAATTTCACTGAAGTAAGATGGCAAGAGGTCTGGTAAAGTCTTGATTGGCCCAGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461189.1
CDS CCA 72 bp CAGAATATAACCAGTCTTAGATACTCCTCTAAATTGTaGATAGTGACTGGTATATCCTTCCCTCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: QNITSLRYSSKL*IVTGISFPPFF
Trigger: GAAGAAAGGAGGGAAGGATATACCAGTCACTATCCACAATTTAGAGGAGTATCTAAGACTGGTTATATTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS CCA 72 bp ACACAGTTACATACTCTTAGATACTCCTCTAAATTGTaGATAGTGACTGGTATATCCTTCCCTCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: TQLHTLRYSSKL*IVTGISFPPFF
Trigger: GAAGAAAGGAGGGAAGGATATACCAGTCACTATCCACAATTTAGAGGAGTATCTAAGAGTATGTAACTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459841.1
CDS CAA 72 bp AAGACACAGTTACATACTCTTAGATACTCCTCTAAATaGTGGATAGTGACTGGTATATCCTTCCCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: KTQLHTLRYSSK*WIVTGISFPPF
Trigger: GAAAGGAGGGAAGGATATACCAGTCACTATCCACAATTTAGAGGAGTATCTAAGAGTATGTAACTGTGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459841.1
CDS TCA 72 bp GTTGGGATGTTTCCTGTCATGATTACTAAAGGATCTTaGAGTTGCCTATTTGCTTTTGCTGTTAACTTACTG +
Preference number: 6 (lower is better)
Translates to: VGMFPVMITKGS*SCLFAFAVNLL
Trigger: CAGTAAGTTAACAGCAAAAGCAAATAGGCAACTTCAAGATCCTTTAGTAATCATGACAGGAAACATCCCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS TCA 72 bp TGCTATCAACAGTTTTTCACGCATTATCTCAATGCTTaGATAGTCCGGCAACTTAAGATAGTTCACACAAGT +
Preference number: 6 (lower is better)
Translates to: CYQQFFTHYLNA*IVRQLKIVHTS
Trigger: ACTTGTGTGAACTATCTTAAGTTGCCGGACTATTCAAGCATTGAGATAATGCGTGAAAAACTGTTGATAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1
CDS GCA 72 bp AAGACTGATTCAAATCCATCTCTGAACGAATCAAATTaGCTAGAAACGCCTTCATTTAGTGCCCAGAATATA +
Preference number: 6 (lower is better)
Translates to: KTDSNPSLNESN*LETPSFSAQNI
Trigger: TATATTCTGGGCACTAAATGAAGGCGTTTCTAGGCAATTTGATTCGTTCAGAGATGGATTTGAATCAGTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283943.9
ENST00000389044.8
ENST00000389045.7
ENST00000675423.1
ENST00000675453.1
ENST00000675903.1