RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIP10 (Homo sapiens)

Ensembl gene IDs: ENSG00000125733

Ensembl transcript IDs: ENST00000313244.14, ENST00000313285.12, ENST00000595305.5, ENST00000595319.5, ENST00000596078.5, ENST00000596543.5, ENST00000596673.1, ENST00000596758.5, ENST00000598843.1, ENST00000600428.5, ENST00000600491.5, ENST00000600677.5, ENST00000601303.1

Found 607 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCGCTGGACCCTTCAAAGTGGTAGATGGCCACACAGTGACCTATaGGGGATGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGT +
Preference number: 1 (lower is better)
Translates to: PRWTLQSGRWPHSDL*GMWVPPRNPHQTPC
Trigger: ACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGGGTCCAGCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR GCA 90 bp TCTTTAGGGCTTCCCTCTGGTCAACCTCCTTCTGAAGTTCACGACTaGGTTCTTCCAACTGCTGTTGAAGCCGTTTTCGCTGCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: SLGLPSGQPPSEVHD*VLPTAVEAVFAAAL
Trigger: CAGAGCAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGAACGCAGTCGTGAACTTCAGAAGGAGGTTGACCAGAGGGAAGCCCTAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR CCA 90 bp ACCCTTCAAAGTGGTAGATGGCCACACAGTGACCTATGGGGGATGTaGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATGGGGG +
Preference number: 1 (lower is better)
Translates to: TLQSGRWPHSDLWGM*VPPRNPHQTPCKWG
Trigger: CCCCCATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR CCA 90 bp CGAGCGGCAGAAAGAAAAGATGTAAAACATGAGTATGTACATCAATaGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGAC +
Preference number: 1 (lower is better)
Translates to: RAAERKDVKHEYVHQ*WNDGRRHSGSVRCD
Trigger: GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTCTGCCGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
3UTR-3UTR CCA 90 bp GGGCACGTAGCCCTCGCCTCCCTCTTTCCGCCTGACCCGGGTCCAGCCGTCCCCCTTCAGAGCTCTCCTTaGTGTCCTGTGATGCGCTGT +
Preference number: 2 (lower is better)
Translates to: GHVALASLFPPDPGPAVPLQSSP*CPVMRC
Trigger: ACAGCGCATCACAGGACACCAAGGAGAGCTCTGAAG...GGGGACGGCTGGACCCGGGTCAGGCGGAAAGAGGGAGGCGAGGGCTACGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR TCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGCGGGTCCGTCCGGTGTaGCAGGTAGGACTGGGTTGG +
Preference number: 2 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGRVRPV*QVGLGW
Trigger: CCAACCCAGTCCTACCTGTCACACCGGACGGACCCG...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
3UTR CAA 90 bp CCCTCGCCTCCCTCTTTCCGCCTGACCCGGGTCCAGCCGTCCCCTTaGTCTTCTTCCATAAGACTGAGGTCTTCACCCTCGGCCATAGAG +
Preference number: 2 (lower is better)
Translates to: PSPPSFRLTRVQPSP*SSSIRLRSSPSAIE
Trigger: CTCTATGGCCGAGGGTGAAGACCTCAGTCTTATGGAAGAAGACAAAGGGGACGGCTGGACCCGGGTCAGGCGGAAAGAGGGAGGCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR CCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAAAGTGCATAGGTCCTaGGGCTCCCCGTGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDKVHRS*GSPWPR
Trigger: TCTGGGCCACGGGGAGCCCCAGGACCTATGCACTTT...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
3UTR-3UTR TCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGTCTTCCAACTGCTGTTaGAGCCGTTTTCGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLSSNCC*SRFRCC
Trigger: GCAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGA...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR GCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTAGCCGTTTTCGCTGCTaGTCTGGGGGCAAGTGGCTA +
Preference number: 2 (lower is better)
Translates to: QVSAEATGSEIKCIGPGASRFRC*SGGKWL
Trigger: TAGCCACTTGCCCCCAGAGCAGCAGCGAAAACGGCT...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR CAA 90 bp AGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTaGCTCAGGGTTTCAGCGATCTGGGGCTCCAAGCTGGCGGGGTCC +
Preference number: 2 (lower is better)
Translates to: SHASYFCTSNFSRSM*LRVSAIWGSKLAGS
Trigger: GGACCCCGCCAGCTTGGAGCCCCAGATCGCTGAAACCCTGAGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR CCA 90 bp TGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATGGGGGTGTCCTGAAAGTGCATAGGTCCTaGGGCTCCCCGTGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: CGFLLEILIKLRVNGGVLKVHRS*GSPWPR
Trigger: TCTGGGCCACGGGGAGCCCCAGGACCTATGCACTTT...CAGGACACCCCCATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR CCA 90 bp CCCTCTTCCCGTCTCTGGCAGGGTTCAATTGAGCGTGACTCGGAGGTAGGAGGTCAAACTCCGTGTAAATaGGGGTGTCCTGGCTCTCTT +
Preference number: 2 (lower is better)
Translates to: PSSRLWQGSIERDSEVGGQTPCK*GCPGSL
Trigger: AAGAGAGCCAGGACACCCCCATTTACACGGAGTTTG...ACCTCCTACCTCCGAGTCACGCTCAATTGAACCCTGCCAGAGACGGGAAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR GCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTTCAGCCGTTCAATGTTaGTCAGGGTTTCAGCGATCT +
Preference number: 2 (lower is better)
Translates to: QVSAEATGSEIKCIGPGASAVQC*SGFQRS
Trigger: AGATCGCTGAAACCCTGAGCAACATTGAACGGCTGA...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR CCA 90 bp AGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCCACACAGTGACCTATGGGTTGTATAAAACAAAATaGCCGGAGCCGAGCGGCAGA +
Preference number: 2 (lower is better)
Translates to: SALAGPFKVVDGHTVTYGLYKTK*PEPSGR
Trigger: TCTGCCGCTCGGCTCCGGCCATTTTGTTTTATACAA...CCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR GCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACTCTGAAGTTCACGACTaGGTTCTTCCAACTGCTGTT +
Preference number: 2 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDSEVHD*VLPTAV
Trigger: AACAGCAGTTGGAAGAACGCAGTCGTGAACTTCAGA...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR CCA 90 bp CCTTTGTCTTCTTCCATAAGACTGAGGTCTTCACCCTCGGCCATAGAGATAGTGGAGTATGTACATCAATaGTGGAACGATGGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: PLSSSIRLRSSPSAIEIVEYVHQ*WNDGRR
Trigger: CCTTCTACCATCGTTCCACCATTGATGTACATACTC...CACTATCTCTATGGCCGAGGGTGAAGACCTCAGTCTTATGGAAGAAGACAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR CAA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTAGGCTGTCTCCCCGGTaGCTAAGGACTCGACTTTCA +
Preference number: 3 (lower is better)
Translates to: QVSAEATGSEIKCIGPGARLSPR*LRTRLS
Trigger: TGAAAGTCGAGTCCTTAGCAACCGGGGAGACAGCCT...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR CAA 90 bp TGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATGGGGGTGTCCTGTCCTGTGATGCGCTGTaGCTGCTGCTGTCTGGCGGG +
Preference number: 3 (lower is better)
Translates to: CGFLLEILIKLRVNGGVLSCDAL*LLLSGG
Trigger: CCCGCCAGACAGCAGCAGCAACAGCGCATCACAGGA...CAGGACACCCCCATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR TCA 72 bp AAACTCCGTGTAAATGGGGGTGTCCTGGCTCTCTTCTaGGGGAGGCTCTTCAGAGCTCTCCTTGGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: KLRVNGGVLALF*GRLFRALLGVL
Trigger: CAGGACACCAAGGAGAGCTCTGAAGAGCCTCCCTCAGAAGAGAGCCAGGACACCCCCATTTACACGGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR CCA 72 bp GTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATaGGGGTGTCCTGGCTCTCTTCTGAGGGAGGCTCTT +
Preference number: 3 (lower is better)
Translates to: VPPRNPHQTPCK*GCPGSLLREAL
Trigger: AAGAGCCTCCCTCAGAAGAGAGCCAGGACACCCCCATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR CCA 72 bp AGTGGTAGATGGCCACACAGTGACCTATGGGGGATGTaGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGT +
Preference number: 3 (lower is better)
Translates to: SGRWPHSDLWGM*VPPRNPHQTPC
Trigger: ACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR-3UTR CAA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTTTCTTCCAACTGCTGTaGAAGCCGTTTTCGCTGCTG +
Preference number: 3 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGFFQLL*KPFSLL
Trigger: CAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGAA...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR GCA 72 bp CTTCCCTCTGGTCAACCTCCTTCTGAAGTTCACGACTaGGTTCTTCCAACTGCTGTTGAAGCCGTTTTCGCT +
Preference number: 3 (lower is better)
Translates to: LPSGQPPSEVHD*VLPTAVEAVFA
Trigger: AGCGAAAACGGCTTCAACAGCAGTTGGAAGAACGCAGTCGTGAACTTCAGAAGGAGGTTGACCAGAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR CCA 72 bp ACCCTTCAAAGTGGTAGATGGCCACACAGTGACCTATaGGGGATGTGGGTTCCTCCTCGAAATCCTCATCAA +
Preference number: 3 (lower is better)
Translates to: TLQSGRWPHSDL*GMWVPPRNPHQ
Trigger: TTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR CCA 72 bp AGAAAAGATGTAAAACATGAGTATGTACATCAATGGTaGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGG +
Preference number: 3 (lower is better)
Translates to: RKDVKHEYVHQW*NDGRRHSGSVR
Trigger: CCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
3UTR CCA 72 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATaGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTC +
Preference number: 3 (lower is better)
Translates to: ERKDVKHEYVHQ*WNDGRRHSGSV
Trigger: GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGAGGTGGGCACGTAGCCCTCGCCTCCCTCTTTCCGCCTGACCCGGGTCCAGCCAGGTCCAGCCCCCACTaGGTGTGGCGCTCGAGCACC +
Preference number: 4 (lower is better)
Translates to: GGGHVALASLFPPDPGPARSSPH*VWRSST
Trigger: GGTGCTCGAGCGCCACACGCAGTGGGGGCTGGACCT...GGCTGGACCCGGGTCAGGCGGAAAGAGGGAGGCGAGGGCTACGTGCCCACCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGTGCCCCAATCCATGCTaGTCCCGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVCPNPC*SRRRRR
Trigger: GCGGCGGCGGCGGCGGGAGCAGCATGGATTGGGGCA...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600677.5
CDS-3UTR GCA 90 bp GGGCACGTAGCCCTCGCCTCCCTCTTTCCGCCTGACCCGGGTCCAGCCGTCCCCAGCCGTTTTCGCTGCTaGTCTGGGGGCAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: GHVALASLFPPDPGPAVPSRFRC*SGGKWL
Trigger: TAGCCACTTGCCCCCAGAGCAGCAGCGAAAACGGCT...GGGGACGGCTGGACCCGGGTCAGGCGGAAAGAGGGAGGCGAGGGCTACGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp GGAGGTGGGCACGTAGCCCTCGCCTCCCTCTTTCCGCCTGACCCGGGTCCAGCCAGCCGTTCAGCAGTCTaGGCTGCCTTCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGGHVALASLFPPDPGPASRSAV*AAFSAS
Trigger: GGAGGCAGAGAAGGCAGCCCAGACTGCTGAACGGCT...GGCTGGACCCGGGTCAGGCGGAAAGAGGGAGGCGAGGGCTACGTGCCCACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR TCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGCCTCGCTGGACCCTGTaGTGGGGGTGGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLPRWTL*WGWGWA
Trigger: GGCCCACCCCCACCCCCATCACAGGGTCCAGCGAGG...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596758.5
CDS-3UTR GCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGTCGGGAGGCCGGGCGTaGCGGCTCAGGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLSGGRA*RLRLSP
Trigger: GGGAGACAGCCTGAGCCGGCACGCCCGGCCTCCCGA...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGCAAAAGGCCAGCGCTTaGTGCGGCTGCGACCCGGGC +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVQKASA*CGCDPG
Trigger: GCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTG...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
3UTR CAA 72 bp GGAGGCCGGGCGTGCCGGCTCAGGCTGTCTCCCCGGTaGCTAAGGACTCGACTTTCAGCTTCTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GGRACRLRLSPR*LRTRLSASASH
Trigger: GTGGCTGGCAGAAGCTGAAAGTCGAGTCCTTAGCAACCGGGGAGACAGCCTGAGCCGGCACGCCCGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGAAGGCCAGCGCTTGGTaGGGCTGCGACCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLKASAW*GCDPGL
Trigger: GAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTT...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCTCGGGAGGCCGGGCGTaGCGGCTCAGGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VSAEATGSEIKCIGPGAPSGGRA*RLRLSP
Trigger: GGGAGACAGCCTGAGCCGGCACGCCCGGCCTCCCGA...GGGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCAGTGCCCCAATCCATaGTGCTCCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSQCPNP*CSRRRR
Trigger: GCGGCGGCGGCGGGAGCAGCATGGATTGGGGCACTG...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600677.5
CDS-3UTR GCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGAAGCCATTTTCCAGCTaGTGCTGGGCCCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVKPFSS*CWARRP
Trigger: AGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTT...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGCAAAAGGCCAGCGCTTaGTGCGGCTGCGACCCGGGC +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLQKASA*CGCDPG
Trigger: GCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTG...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGCTCGGAGGTAGGAGGTaGGCACGTAGCCCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGLGGRR*ARSPRL
Trigger: GAGGCGAGGGCTACGTGCCCACCTCCTACCTCCGAG...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACCTCCCTCTTTCCGCCTaGCCCGGGTCCAGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDLPLSA*PGSSRP
Trigger: GGGACGGCTGGACCCGGGTCAGGCGGAAAGAGGGAG...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGCGGGTCCGTCCGGTGTaGCAGGTAGGACTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLRVRPV*QVGLGW
Trigger: CCAACCCAGTCCTACCTGTCACACCGGACGGACCCG...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGAGGGGGTGCCCAGACTaGTGTCGGAGGGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLRGCPD*CRRVHG
Trigger: ACCGTGCACCCTCCGACAGCAGTCTGGGCACCCCCT...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGGGCTGCCTCGAAGGCTaGGGAAGGATGCTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGGCLEG*GRMLAS
Trigger: CGAGGCTAGCATCCTTCCGCAGCCTTCGAGGCAGCC...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS-3UTR GCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGCCTGTGATGCGCTGTTaGTGCTGCTGTCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGPVMRC*CCCLAG
Trigger: CCCCGCCAGACAGCAGCAGCAACAGCGCATCACAGG...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGGCCCGCCGCCCTTCTTaGAAGTGCATCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVARRPS*KCIFLS
Trigger: GGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGC...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTCCAGCCCCCACTaGGTGTGGCGCTCGAGCACC +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDRSSPH*VWRSST
Trigger: GGTGCTCGAGCGCCACACGCAGTGGGGGCTGGACCT...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGCAGCTCCCGCTGGCCTaGAAAGTCATTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVQLPLA*KVIHLL
Trigger: CAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTG...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGCCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLPFSSC*WARRPS
Trigger: AGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGG...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGAAGCCATTTTCCAGCTaGTGCTGGGCCCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLKPFSS*CWARRP
Trigger: AGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTT...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ACCCTCGGCCATAGAGATAGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCCTGGGCTGCCTTCTCTaGCTCCCGGCAGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: TLGHRDSALAGPFKVVDGLGCLL*LPAVPL
Trigger: GAGCGGGACTGCCGGGAGGCAGAGAAGGCAGCCCAG...GCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACTATCTCTATGGCCGAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGACTGCTGTCGGAGGGTaGACGGTTCATGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGTAVGG*TVHGLA
Trigger: AGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGT...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGACTGCTGTCGGAGGGTaGACGGTTCATGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGTAVGG*TVHGLA
Trigger: AGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGT...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCGTCCATCCGAGGGGGTaGCCAGACTGCTGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VSAEATGSEIKCIGPGAPVHPRG*PDCCRR
Trigger: CCTCCGACAGCAGTCTGGGCACCCCCTCGGATGGAC...GGGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTAGCGCTTGGTGCGGCTaGGACCCGGGCCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGASAWCG*DPGLGV
Trigger: AACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCT...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTTCGGGAGGCCGGGCGTaGCGGCTCAGGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGSGGRA*RLRLSP
Trigger: GGGAGACAGCCTGAGCCGGCACGCCCGGCCTCCCGA...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGGCCACCAGCTCCCGCTaGCCTGCAAAGTCATTCACC +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGATSSR*PAKSFT
Trigger: GGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGC...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGAGCCGTTCAGCAGTCTaGGCTGCCTTCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGSRSAV*AAFSAS
Trigger: GGAGGCAGAGAAGGCAGCCCAGACTGCTGAACGGCT...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCCGGCACCCAGGCGGGTaGCCCTGCGTTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: VSAEATGSEIKCIGPGAPRHPGG*PCVHPC
Trigger: ACATGGATGAACGCAGGGCCACCCGCCTGGGTGCCG...GGGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGAGGGTTTCAGCGATCTaGGGCTCCAAGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLRVSAI*GSKLAG
Trigger: CCCCGCCAGCTTGGAGCCCCAGATCGCTGAAACCCT...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCCTCGGAGGTAGGAGGTaGGCACGTAGCCCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: VSAEATGSEIKCIGPGAPLGGRR*ARSPRL
Trigger: GAGGCGAGGGCTACGTGCCCACCTCCTACCTCCGAG...GGGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCTCGGAGGTAGGAGGTaGGCACGTAGCCCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSLGGRR*ARSPRL
Trigger: GAGGCGAGGGCTACGTGCCCACCTCCTACCTCCGAG...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGCAGCCTTGGTGGCGTTaGTATCCTGGTCTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVQPWWR*YPGLAV
Trigger: AACGGCTAGACCAGGATATCAACGCCACCAAGGCTG...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGCTCCTTGGTGTCCTGTaGTGCGCTGTTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGLLGVL*CAVAAA
Trigger: AGCAGCAGCAACAGCGCATCACAGGACACCAAGGAG...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTCTCCCTCTTTCCGCCTaGCCCGGGTCCAGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCLPLSA*PGSSRP
Trigger: GGGACGGCTGGACCCGGGTCAGGCGGAAAGAGGGAG...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCGGGTCCGTCCGGTGTaGCAGGTAGGACTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGARVRPV*QVGLGW
Trigger: CCAACCCAGTCCTACCTGTCACACCGGACGGACCCG...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGCCAGGCGGGTGGCCCTaGGTTCATCCATGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLPGGWP*VHPCLG
Trigger: TCCAAGACATGGATGAACGCAGGGCCACCCGCCTGG...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCAGGGGGTGCCCAGACTaGTGTCGGAGGGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCRGCPD*CRRVHG
Trigger: ACCGTGCACCCTCCGACAGCAGTCTGGGCACCCCCT...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCGTCCATCCGAGGGGGTaGCCAGACTGCTGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCVHPRG*PDCCRR
Trigger: CCTCCGACAGCAGTCTGGGCACCCCCTCGGATGGAC...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCACTGTCCCACGGCTaGCTCGAAGGCTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAPLSHG*LEGCGR
Trigger: CCTTCCGCAGCCTTCGAGGCAGCCGTGGGACAGTGG...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS-3UTR GCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGAGCCGTTTTCGCTGCTaGTCTGGGGGCAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGSRFRC*SGGKWL
Trigger: TAGCCACTTGCCCCCAGAGCAGCAGCGAAAACGGCT...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTTCGGGAGGCCGGGCGTaGCGGCTCAGGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPSGGRA*RLRLSP
Trigger: GGGAGACAGCCTGAGCCGGCACGCCCGGCCTCCCGA...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTGTGATGCGCTGTTGCTaGTGCTGTCTGGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGVMRCC*CCLAGR
Trigger: GCGCCCCGCCAGACAGCAGCAGCAACAGCGCATCAC...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACGTGATGCGCTGTTGCTaGTGCTGTCTGGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDVMRCC*CCLAGR
Trigger: GCGCCCCGCCAGACAGCAGCAGCAACAGCGCATCAC...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTAGCCCCCACTGCGTGTaGCGCTCGAGCACCTCGAAC +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGASPHCV*RSSTSN
Trigger: GTTCGAGGTGCTCGAGCGCCACACGCAGTGGGGGCT...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGCCCGCCGCCCTTCTTaGAAGTGCATCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLARRPS*KCIFLS
Trigger: GGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGC...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCGGCACCCAGGCGGGTaGCCCTGCGTTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGARHPGG*PCVHPC
Trigger: ACATGGATGAACGCAGGGCCACCCGCCTGGGTGCCG...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGAGCACTTGGCTATTATaGGCACCACCTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVSTWLL*APPPAR
Trigger: CCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCT...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCGAGTCCGGTCTAGCCTaGAATCTGGGGGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSESGLA*NLGVGL
Trigger: GAGCCCCACCCCCAGATTCCAGGCTAGACCGGACTC...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS-3UTR TCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGGACATACACGGACACTaGGGTTCTCAGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGDIHGH*GSQPPA
Trigger: AGCTGGTGGCTGAGAACCTCAGTGTCCGTGTATGTC...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGCTTTCTTCGGCCATGTaGCTCCGAAGGTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLLSSAM*LRRWAC
Trigger: GCAAGCCCACCTTCGGAGTCACATGGCCGAAGAAAG...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTGGGCTTGGTCTCGGTTaGAGCGCTGCAGTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGGLGLG*SAAVEP
Trigger: CGGCTCAACTGCAGCGCTTCAACCGAGACCAAGCCC...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCGGGCTTGGTCTCGGTTaGAGCGCTGCAGTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCGLGLG*SAAVEP
Trigger: CGGCTCAACTGCAGCGCTTCAACCGAGACCAAGCCC...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGCGGGCGGGCAAAACCTaGCTTGTGCAGCTCTATAAG +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGRAGKT*LVQLYK
Trigger: CTTATAGAGCTGCACAAGTCAGGTTTTGCCCGCCCG...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AGGTCTTCACCCTCGGCCATAGAGATAGTGCCCTCGCTGGACCCTTCAAAGTGGCCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RSSPSAIEIVPSLDPSKWPFSSC*WARRPS
Trigger: AGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGG...CCACTTTGAAGGGTCCAGCGAGGGCACTATCTCTATGGCCGAGGGTGAAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTAAGCCATTTTCCAGCTaGTGCTGGGCCCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAKPFSS*CWARRP
Trigger: AGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTT...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAAGCCATTTTCCAGCTaGTGCTGGGCCCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGKPFSS*CWARRP
Trigger: AGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTT...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGCGAAGGTGGGCTTGCTaGTTGGCCTTCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGRRWAC*LAFSTS
Trigger: TGATGTGGAGAAGGCCAAGCAGCAAGCCCACCTTCG...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCCCAGGCGGGTGGCCCTaGGTTCATCCATGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VSAEATGSEIKCIGPGAPPGGWP*VHPCLG
Trigger: TCCAAGACATGGATGAACGCAGGGCCACCCGCCTGG...GGGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGTTGCAGCCACCTTCATaGCCTCCAAGCACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVLQPPS*PPSTWL
Trigger: TAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAA...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AGTGGTAGATGGCCACACAGTGACCTATGGGGGATGTGGGTTCCTCCTCGAAATAGCGCTTGGTGCGGCTaGGACCCGGGCCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: SGRWPHSDLWGMWVPPRNSAWCG*DPGLGV
Trigger: AACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCT...ATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTAAGGCCAGCGCTTGGTaGGGCTGCGACCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPKASAW*GCDPGL
Trigger: GAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTT...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTCCTGTGATGCGCTGTTaGTGCTGCTGTCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGPVMRC*CCCLAG
Trigger: CCCCGCCAGACAGCAGCAGCAACAGCGCATCACAGG...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCAGGGTTTCAGCGATCTaGGGCTCCAAGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCRVSAI*GSKLAG
Trigger: CCCCGCCAGCTTGGAGCCCCAGATCGCTGAAACCCT...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGGTTTCAGCGATCTaGGGCTCCAAGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGRVSAI*GSKLAG
Trigger: CCCCGCCAGCTTGGAGCCCCAGATCGCTGAAACCCT...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGGACCTATGGGGGATGTaGGTTCCTCCTCGAAATCCT +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVDLWGM*VPPRNP
Trigger: AGGATTTCGAGGAGGAACCCACATCCCCCATAGGTC...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCCACACAGTGACCTATGGGCCACTGTCTGCAAGGTaGGTAGAGGGCCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: SALAGPFKVVDGHTVTYGPLSAR*VEGPRL
Trigger: CAGCCGTGGGCCCTCTACCCACCTTGCAGACAGTGG...CCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
3UTR CAA 72 bp CCCTCTTTCCGCCTGACCCGGGTCCAGCCGTCCCCTTaGTCTTCTTCCATAAGACTGAGGTCTTCACCCTCG +
Preference number: 4 (lower is better)
Translates to: PSFRLTRVQPSP*SSSIRLRSSPS
Trigger: CGAGGGTGAAGACCTCAGTCTTATGGAAGAAGACAAAGGGGACGGCTGGACCCGGGTCAGGCGGAAAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR TCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGCAGCCTTGGTGGCGTTaGTATCCTGGTCTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLQPWWR*YPGLAV
Trigger: AACGGCTAGACCAGGATATCAACGCCACCAAGGCTG...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGTTCATGGGCTGGCTaGAGTCCTCGAATTCCACGT +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLGSWAG*SPRIPR
Trigger: ACGTGGAATTCGAGGACTTCAGCCAGCCCATGAACC...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTCTTCCAACTGCTGTTaGAGCCGTTTTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGSSNCC*SRFRCC
Trigger: GCAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGA...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCGTCCTGGCTCTCTTCTaGGGGAGGCTCTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VSAEATGSEIKCIGPGAPVLALF*GRLFRA
Trigger: AGCTCTGAAGAGCCTCCCTCAGAAGAGAGCCAGGAC...GGGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGCTCCCTCTTTCCGCCTaGCCCGGGTCCAGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPLPLSA*PGSSRP
Trigger: GGGACGGCTGGACCCGGGTCAGGCGGAAAGAGGGAG...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ACCTATGGGGGATGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATTGCCCCAATCCATGCTaGTCCCGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: TYGGCGFLLEILIKLRVNCPNPC*SRRRRR
Trigger: GCGGCGGCGGCGGCGGGAGCAGCATGGATTGGGGCA...ATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCAGGTCCAGCCCCCACTaGGTGTGGCGCTCGAGCACC +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVRSSPH*VWRSST
Trigger: GGTGCTCGAGCGCCACACGCAGTGGGGGCTGGACCT...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCAGCTCCCGCTGGCCTaGAAAGTCATTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSQLPLA*KVIHLL
Trigger: CAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTG...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCTGGGCTGCCTTCTCTaGCTCCCGGCAGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVLGCLL*LPAVPL
Trigger: GAGCGGGACTGCCGGGAGGCAGAGAAGGCAGCCCAG...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCTTCAGCAGTCTGGGCTaGCTTCTCTGCCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCFSSLG*LLCLPA
Trigger: TGCCGGGAGGCAGAGAAGGCAGCCCAGACTGCTGAA...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACACTGCTGTCGGAGGGTaGACGGTTCATGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDTAVGG*TVHGLA
Trigger: AGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGT...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTCCATCCGAGGGGGTaGCCAGACTGCTGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGVHPRG*PDCCRR
Trigger: CCTCCGACAGCAGTCTGGGCACCCCCTCGGATGGAC...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCAGCGCTTGGTGCGGCTaGGACCCGGGCCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVSAWCG*DPGLGV
Trigger: AACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCT...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGAAGGCCAGCGCTTGGTaGGGCTGCGACCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPKASAW*GCDPGL
Trigger: GAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTT...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCGGGTCCGTTAGGCAATaGCGAGGGTACGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVGSVRQ*RGYGAP
Trigger: GGGGGCCCCGTACCCTCGGCATTGCCTAACGGACCC...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS-3UTR CCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTAGCCCCCACTGCGTGTaGCGCTCGAGCACCTCGAAC +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGSPHCV*RSSTSN
Trigger: GTTCGAGGTGCTCGAGCGCCACACGCAGTGGGGGCT...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGGCTCCGCAGTTGTTTaGCGTAAGCCTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGGSAVV*RKPVPL
Trigger: AAGTGGAACAGGCTTACGCCAAACAACTGCGGAGCC...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGACTCAGGATCATCCTTaGCAGGTCTCTTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVTQDHP*QVSWAD
Trigger: ATCTGCCCAAGAGACCTGCCAAGGATGATCCTGAGT...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTGCCCGCCGCCCTTCTTaGAAGTGCATCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAARRPS*KCIFLS
Trigger: GGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGC...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCGCCCGCCGCCCTTCTTaGAAGTGCATCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCARRPS*KCIFLS
Trigger: GGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGC...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCAGCCGTTCAGCAGTCTaGGCTGCCTTCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCSRSAV*AAFSAS
Trigger: GGAGGCAGAGAAGGCAGCCCAGACTGCTGAACGGCT...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGAGCACTTGGCTATTATaGGCACCACCTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLSTWLL*APPPAR
Trigger: CCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCT...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGCGTGGGAGTCGTTCTTaGGATCCACAGCATTTGCAG +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGRGSRS*DPQHLQ
Trigger: CTGCAAATGCTGTGGATCCCAAGAACGACTCCCACG...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGCTTCAGAGCTCTCCTTaGTGTCCTGTGATGCGCTGT +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGLQSSP*CPVMRC
Trigger: ACAGCGCATCACAGGACACCAAGGAGAGCTCTGAAG...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCGACATACACGGACACTaGGGTTCTCAGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSDIHGH*GSQPPA
Trigger: AGCTGGTGGCTGAGAACCTCAGTGTCCGTGTATGTC...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACCTTTCTTCGGCCATGTaGCTCCGAAGGTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDLSSAM*LRRWAC
Trigger: GCAAGCCCACCTTCGGAGTCACATGGCCGAAGAAAG...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCGGTTCATGGGCTGGCTaGAGTCCTCGAATTCCACGT +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSGSWAG*SPRIPR
Trigger: ACGTGGAATTCGAGGACTTCAGCCAGCCCATGAACC...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTGGTCAACCTCCTTCTaGAGTTCACGACTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGWSTSF*SSRLRS
Trigger: AGAACGCAGTCGTGAACTTCAGAAGGAGGTTGACCA...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACGTCCTGGCTCTCTTCTaGGGGAGGCTCTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDVLALF*GRLFRA
Trigger: AGCTCTGAAGAGCCTCCCTCAGAAGAGAGCCAGGAC...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCGTCCTGGCTCTCTTCTaGGGGAGGCTCTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCVLALF*GRLFRA
Trigger: AGCTCTGAAGAGCCTCCCTCAGAAGAGAGCCAGGAC...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGAGGTCCAGCCCCCACTaGGTGTGGCGCTCGAGCACC +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPRSSPH*VWRSST
Trigger: GGTGCTCGAGCGCCACACGCAGTGGGGGCTGGACCT...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTCAGCTCCCGCTGGCCTaGAAAGTCATTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGQLPLA*KVIHLL
Trigger: CAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTG...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGCGCCCTTCTTGGAAGTaGATCTTCCTCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGRPSWK*IFLSCF
Trigger: GAAACAGGAGAGGAAGATGCACTTCCAAGAAGGGCG...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTCCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCPFSSC*WARRPS
Trigger: AGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGG...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGCTGGGCTGCCTTCTCTaGCTCCCGGCAGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPLGCLL*LPAVPL
Trigger: GAGCGGGACTGCCGGGAGGCAGAGAAGGCAGCCCAG...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCGAAGGTGGGCTTGCTaGTTGGCCTTCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSRRWAC*LAFSTS
Trigger: TGATGTGGAGAAGGCCAAGCAGCAAGCCCACCTTCG...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGGCAAAACCTGACTTGTaGAGCTCTATAAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVAKPDL*SSIRTW
Trigger: CCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGC...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGCACGCCTCATACTTCTaGACTTCCAATTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVHASYF*TSNFSR
Trigger: ACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTG...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCGGGAGGCCGGGCGTaGCGGCTCAGGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGSGGRA*RLRLSP
Trigger: GGGAGACAGCCTGAGCCGGCACGCCCGGCCTCCCGA...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGTGATGCGCTGTTGCTaGTGCTGTCTGGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPVMRCC*CCLAGR
Trigger: GCGCCCCGCCAGACAGCAGCAGCAACAGCGCATCAC...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp TGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATGGGGGTGTCCTGAGCCCCCACTGCGTGTaGCGCTCGAGCACCTCGAAC +
Preference number: 4 (lower is better)
Translates to: CGFLLEILIKLRVNGGVLSPHCV*RSSTSN
Trigger: GTTCGAGGTGCTCGAGCGCCACACGCAGTGGGGGCT...CAGGACACCCCCATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGACTCAGGATCATCCTTaGCAGGTCTCTTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGTQDHP*QVSWAD
Trigger: ATCTGCCCAAGAGACCTGCCAAGGATGATCCTGAGT...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGACGAAGGACTGTTGCTaGCTGAATTTGGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVTKDCC*LNLDSG
Trigger: TCCTGAGTCCAAATTCAGCCAGCAACAGTCCTTCGT...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTGGTGGGCTTGCTGCTTaGCCTTCTCCACATCAGCCT +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAGGLAA*PSPHQP
Trigger: AGGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACC...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGCACCCAGGCGGGTaGCCCTGCGTTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVRHPGG*PCVHPC
Trigger: ACATGGATGAACGCAGGGCCACCCGCCTGGGTGCCG...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCAGCACTTGGCTATTATaGGCACCACCTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSSTWLL*APPPAR
Trigger: CCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCT...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGTGCCCTCCAAGCACTTaGCTATTATGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLCPPST*LLWAPP
Trigger: AGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCA...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGAGCTCTATAAGGACGTaGGAGTCGTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGSSIRT*ESFLGS
Trigger: GGATCCCAAGAACGACTCCCACGTCCTTATAGAGCT...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCGCACGGTTCATGGGCTaGCTGAAGTCCTCGAATTCC +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSARFMG*LKSSNS
Trigger: GGAATTCGAGGACTTCAGCCAGCCCATGAACCGTGC...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGCTTCAAAGTGGTAGATaGCCACACAGTGACCTATGG +
Preference number: 4 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVLQSGR*PHSDLW
Trigger: CCATAGGTCACTGTGTGGCCATCTACCACTTTGAAG...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACGACATACACGGACACTaGGGTTCTCAGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDDIHGH*GSQPPA
Trigger: AGCTGGTGGCTGAGAACCTCAGTGTCCGTGTATGTC...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp AAGACTGAGGTCTTCACCCTCGGCCATAGAGATAGTGCCCTCGCTGGACCCTTCGACATACACGGACACTaGGGTTCTCAGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: KTEVFTLGHRDSALAGPFDIHGH*GSQPPA
Trigger: AGCTGGTGGCTGAGAACCTCAGTGTCCGTGTATGTC...GAAGGGTCCAGCGAGGGCACTATCTCTATGGCCGAGGGTGAAGACCTCAGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR TCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACCAGCCTTGGTGGCGTTaGTATCCTGGTCTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDQPWWR*YPGLAV
Trigger: AACGGCTAGACCAGGATATCAACGCCACCAAGGCTG...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCGGGCTTGGTCTCGGTTaGAGCGCTGCAGTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVGLGLG*SAAVEP
Trigger: CGGCTCAACTGCAGCGCTTCAACCGAGACCAAGCCC...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTCGGGCGGGCAAAACCTaGCTTGTGCAGCTCTATAAG +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGRAGKT*LVQLYK
Trigger: CTTATAGAGCTGCACAAGTCAGGTTTTGCCCGCCCG...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTGGTTCATGGGCTGGCTaGAGTCCTCGAATTCCACGT +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGGSWAG*SPRIPR
Trigger: ACGTGGAATTCGAGGACTTCAGCCAGCCCATGAACC...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp CCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTCACGGGTCCGTCCGGTGTaGCAGGTAGGACTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PATPHTSALPISAVQCCSRVRPV*QVGLGW
Trigger: CCAACCCAGTCCTACCTGTCACACCGGACGGACCCG...TGAGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCAAGCCATTTTCCAGCTaGTGCTGGGCCCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVKPFSS*CWARRP
Trigger: AGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTT...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCCTGGGCTGCCTTCTCTaGCTCCCGGCAGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSLGCLL*LPAVPL
Trigger: GAGCGGGACTGCCGGGAGGCAGAGAAGGCAGCCCAG...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AGTGGTAGATGGCCACACAGTGACCTATGGGGGATGTGGGTTCCTCCTCGAAATTTCAGCAGTCTGGGCTaGCTTCTCTGCCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: SGRWPHSDLWGMWVPPRNFSSLG*LLCLPA
Trigger: TGCCGGGAGGCAGAGAAGGCAGCCCAGACTGCTGAA...ATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTGGGATCCACAGCATTTaGAGCCACCTTCATGCCCTC +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAGIHSI*SHLHAL
Trigger: GAGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCC...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGGCAAAACCTGACTTGTaGAGCTCTATAAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGAKPDL*SSIRTW
Trigger: CCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGC...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGTCAGCCGTTCAATGTTaGTCAGGGTTTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGSAVQC*SGFQRS
Trigger: AGATCGCTGAAACCCTGAGCAACATTGAACGGCTGA...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGCACGCCTCATACTTCTaGACTTCCAATTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGHASYF*TSNFSR
Trigger: ACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTG...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTCCTGTGATGCGCTGTTaGTGCTGCTGTCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPPVMRC*CCCLAG
Trigger: CCCCGCCAGACAGCAGCAGCAACAGCGCATCACAGG...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGCTGTCTTGTTCTTCTTaGCAAAAGGCCAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLLSCSS*QKASAW
Trigger: CCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGACAG...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
CDS-3UTR GCA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTTCGGTCACCACTGTCTaGAAGGTGGGTAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCSVTTV*KVGRGP
Trigger: GGGCCCTCTACCCACCTTGCAGACAGTGGTGACCGA...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGCCACCAGCTCCCGCTaGCCTGCAAAGTCATTCACC +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGATSSR*PAKSFT
Trigger: GGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGC...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGCCACCAGCTCCCGCTaGCCTGCAAAGTCATTCACC +
Preference number: 4 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCATSSR*PAKSFT
Trigger: GGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGC...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTGCACGGTTCATGGGCTaGCTGAAGTCCTCGAATTCC +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGARFMG*LKSSNS
Trigger: GGAATTCGAGGACTTCAGCCAGCCCATGAACCGTGC...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCTTCAGAGCTCTCCTTaGTGTCCTGTGATGCGCTGT +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSLQSSP*CPVMRC
Trigger: ACAGCGCATCACAGGACACCAAGGAGAGCTCTGAAG...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCGACCTATGGGGGATGTaGGTTCCTCCTCGAAATCCT +
Preference number: 4 (lower is better)
Translates to: VSAEATGSEIKCIGPGAPDLWGM*VPPRNP
Trigger: AGGATTTCGAGGAGGAACCCACATCCCCCATAGGTC...GGGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACCCACACAGTGACCTATaGGGGATGTGGGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDPHSDL*GMWVPP
Trigger: AGGAGGAACCCACATCCCCCATAGGTCACTGTGTGG...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCACACAGTGACCTATaGGGGATGTGGGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAPHSDL*GMWVPP
Trigger: AGGAGGAACCCACATCCCCCATAGGTCACTGTGTGG...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTCCACACAGTGACCTATaGGGGATGTGGGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGPHSDL*GMWVPP
Trigger: AGGAGGAACCCACATCCCCCATAGGTCACTGTGTGG...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGCTTCAAAGTGGTAGATaGCCACACAGTGACCTATGG +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGLQSGR*PHSDLW
Trigger: CCATAGGTCACTGTGTGGCCATCTACCACTTTGAAG...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACCCCTCTTCCCGTCTCTaGCAGGGTTCAATTGAGCGT +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDPSSRL*QGSIER
Trigger: ACGCTCAATTGAACCCTGCCAGAGACGGGAAGAGGG...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTAAAGTGCATAGGTCCTaGGGCTCCCCGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCKVHRS*GSPWPR
Trigger: TCTGGGCCACGGGGAGCCCCAGGACCTATGCACTTT...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTAAAGTGCATAGGTCCTaGGGCTCCCCGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGKVHRS*GSPWPR
Trigger: TCTGGGCCACGGGGAGCCCCAGGACCTATGCACTTT...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGGGGCTTGGTCTCGGTTaGAGCGCTGCAGTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPGLGLG*SAAVEP
Trigger: CGGCTCAACTGCAGCGCTTCAACCGAGACCAAGCCC...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACTCTTCCAACTGCTGTTaGAGCCGTTTTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDSSNCC*SRFRCC
Trigger: GCAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGA...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTCTCCTTGGTGTCCTGTaGTGCGCTGTTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCLLGVL*CAVAAA
Trigger: AGCAGCAGCAACAGCGCATCACAGGACACCAAGGAG...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGCCTGTTCCACTTCGGTaGGTTCTTTCACGAACTTTA +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGPVPLR*VLSRTL
Trigger: TAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGG...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGCTGGGCTGCCTTCTCTaGCTCCCGGCAGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGLGCLL*LPAVPL
Trigger: GAGCGGGACTGCCGGGAGGCAGAGAAGGCAGCCCAG...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCTTCAGCAGTCTGGGCTaGCTTCTCTGCCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSFSSLG*LLCLPA
Trigger: TGCCGGGAGGCAGAGAAGGCAGCCCAGACTGCTGAA...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCCCAGGCGGGTGGCCCTaGGTTCATCCATGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSPGGWP*VHPCLG
Trigger: TCCAAGACATGGATGAACGCAGGGCCACCCGCCTGG...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTCCAGGCGGGTGGCCCTaGGTTCATCCATGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPPGGWP*VHPCLG
Trigger: TCCAAGACATGGATGAACGCAGGGCCACCCGCCTGG...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTTTGCAGCCACCTTCATaGCCTCCAAGCACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGALQPPS*PPSTWL
Trigger: TAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAA...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCACTGCTGTCGGAGGGTaGACGGTTCATGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSTAVGG*TVHGLA
Trigger: AGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGT...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGAGCGCTTGGTGCGGCTaGGACCCGGGCCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGSAWCG*DPGLGV
Trigger: AACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCT...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGCCTGTGATGCGCTGTTaGTGCTGCTGTCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPPVMRC*CCCLAG
Trigger: CCCCGCCAGACAGCAGCAGCAACAGCGCATCACAGG...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp TGCCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTCCTGTGATGCGCTGTTaGTGCTGCTGTCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: CQPRLILLHFQFQPFNVAPVMRC*CCCLAG
Trigger: CCCCGCCAGACAGCAGCAGCAACAGCGCATCACAGG...AGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTGGCTCCGCAGTTGTTTaGCGTAAGCCTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGGSAVV*RKPVPL
Trigger: AAGTGGAACAGGCTTACGCCAAACAACTGCGGAGCC...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACCCTCGGCCATAGAGATAGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCGGCTCCGCAGTTGTTTaGCGTAAGCCTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: TLGHRDSALAGPFKVVDGGSAVV*RKPVPL
Trigger: AAGTGGAACAGGCTTACGCCAAACAACTGCGGAGCC...GCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACTATCTCTATGGCCGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACGTGGCGTTGATATCCTaGTCTAGCCGTTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDVALIS*SSRSAV
Trigger: GACTGCTGAACGGCTAGACCAGGATATCAACGCCAC...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACCGTGGGAGTCGTTCTTaGGATCCACAGCATTTGCAG +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDRGSRS*DPQHLQ
Trigger: CTGCAAATGCTGTGGATCCCAAGAACGACTCCCACG...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGCAAAAGGCCAGCGCTTaGTGCGGCTGCGACCCGGGC +
Preference number: 4 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGQKASA*CGCDPG
Trigger: GCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTG...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGAGGGTTTCAGCGATCTaGGGCTCCAAGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPRVSAI*GSKLAG
Trigger: CCCCGCCAGCTTGGAGCCCCAGATCGCTGAAACCCT...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCCTTCAGAGCTCTCCTTaGTGTCCTGTGATGCGCTGT +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCLQSSP*CPVMRC
Trigger: ACAGCGCATCACAGGACACCAAGGAGAGCTCTGAAG...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCTTCAGAGCTCTCCTTaGTGTCCTGTGATGCGCTGT +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGALQSSP*CPVMRC
Trigger: ACAGCGCATCACAGGACACCAAGGAGAGCTCTGAAG...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTGACCTATGGGGGATGTaGGTTCCTCCTCGAAATCCT +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGADLWGM*VPPRNP
Trigger: AGGATTTCGAGGAGGAACCCACATCCCCCATAGGTC...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGTTGTATAAAACAAAATaGCCGGAGCCGAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLLYKTK*PEPSGR
Trigger: TCTGCCGCTCGGCTCCGGCCATTTTGTTTTATACAA...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTCAAAAGCCTCAGCTCTaGCTGGGAGCCACATCCCTG +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGQKPQL*LGATSL
Trigger: CAGGGATGTGGCTCCCAGCCAGAGCTGAGGCTTTTG...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS-3UTR TCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCCTTTCTTCGGCCATGTaGCTCCGAAGGTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSLSSAM*LRRWAC
Trigger: GCAAGCCCACCTTCGGAGTCACATGGCCGAAGAAAG...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTCTTTCTTCGGCCATGTaGCTCCGAAGGTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPLSSAM*LRRWAC
Trigger: GCAAGCCCACCTTCGGAGTCACATGGCCGAAGAAAG...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp CCCTCTTCCCGTCTCTGGCAGGGTTCAATTGAGCGTGACTCGGAGGTAGGAGGTTTGAAGCGCTGCAGTTaGGCCGCATATTCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PSSRLWQGSIERDSEVGGLKRCS*AAYSFL
Trigger: CAAAAACGAATATGCGGCTCAACTGCAGCGCTTCAA...ACCTCCTACCTCCGAGTCACGCTCAATTGAACCCTGCCAGAGACGGGAAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR TCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCTCCTTGGTGTCCTGTaGTGCGCTGTTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVLLGVL*CAVAAA
Trigger: AGCAGCAGCAACAGCGCATCACAGGACACCAAGGAG...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp CGAAATCCTCATCAAACTCCGTGTAAATGGGGGTGTCCTGGCTCTCTTCTGAGGCTCCTTGGTGTCCTGTaGTGCGCTGTTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RNPHQTPCKWGCPGSLLRLLGVL*CAVAAA
Trigger: AGCAGCAGCAACAGCGCATCACAGGACACCAAGGAG...CCTCAGAAGAGAGCCAGGACACCCCCATTTACACGGAGTTTGATGAGGATTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR TCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGTCCTGGCTCTCTTCTaGGGGAGGCTCTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSVLALF*GRLFRA
Trigger: AGCTCTGAAGAGCCTCCCTCAGAAGAGAGCCAGGAC...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCAGTGCCCCAATCCATaGTGCTCCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSQCPNP*CSRRRR
Trigger: GCGGCGGCGGCGGGAGCAGCATGGATTGGGGCACTG...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCCAGCTCCCGCTGGCCTaGAAAGTCATTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSQLPLA*KVIHLL
Trigger: CAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTG...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCCGCCCTTCTTGGAAGTaGATCTTCCTCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCRPSWK*IFLSCF
Trigger: GAAACAGGAGAGGAAGATGCACTTCCAAGAAGGGCG...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCGCCCTTCTTGGAAGTaGATCTTCCTCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGARPSWK*IFLSCF
Trigger: GAAACAGGAGAGGAAGATGCACTTCCAAGAAGGGCG...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCCACACAGTGACCTATGGGCGCCCTTCTTGGAAGTaGATCTTCCTCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SALAGPFKVVDGHTVTYGRPSWK*IFLSCF
Trigger: GAAACAGGAGAGGAAGATGCACTTCCAAGAAGGGCG...CCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGGGATCCACAGCATTTaGAGCCACCTTCATGCCCTC +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGGIHSI*SHLHAL
Trigger: GAGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCC...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGGTCCATCCGAGGGGGTaGCCAGACTGCTGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGVHPRG*PDCCRR
Trigger: CCTCCGACAGCAGTCTGGGCACCCCCTCGGATGGAC...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCAAGGCCAGCGCTTGGTaGGGCTGCGACCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSKASAW*GCDPGL
Trigger: GAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTT...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCCACACAGTGACCTATGGGACTCAGGATCATCCTTaGCAGGTCTCTTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SALAGPFKVVDGHTVTYGTQDHP*QVSWAD
Trigger: ATCTGCCCAAGAGACCTGCCAAGGATGATCCTGAGT...CCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCACGAAGGACTGTTGCTaGCTGAATTTGGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSTKDCC*LNLDSG
Trigger: TCCTGAGTCCAAATTCAGCCAGCAACAGTCCTTCGT...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGGCCACCAGCTCCCGCTaGCCTGCAAAGTCATTCACC +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPATSSR*PAKSFT
Trigger: GGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGC...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTCTCTTGTGAGTACTTaGTCAGCTCAAGACATACAC +
Preference number: 4 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGSLVST*SAQDIH
Trigger: GTGTATGTCTTGAGCTGACCAAGTACTCACAAGAGA...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGGGCTTGCTGCTTaGCCTTCTCCACATCAGCCT +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSGGLAA*PSPHQP
Trigger: AGGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACC...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGCGTTCATCCATGTCTTaGAGCTTATCGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGRSSMS*SLSNIW
Trigger: CCAGATATTCGATAAGCTCCAAGACATGGATGAACG...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTAGCACTTGGCTATTATaGGCACCACCTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCSTWLL*APPPAR
Trigger: CCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCT...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTAGCTCTATAAGGACGTaGGAGTCGTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGASSIRT*ESFLGS
Trigger: GGATCCCAAGAACGACTCCCACGTCCTTATAGAGCT...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGCTCTATAAGGACGTaGGAGTCGTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDSSIRT*ESFLGS
Trigger: GGATCCCAAGAACGACTCCCACGTCCTTATAGAGCT...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGCACGGTTCATGGGCTaGCTGAAGTCCTCGAATTCC +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGARFMG*LKSSNS
Trigger: GGAATTCGAGGACTTCAGCCAGCCCATGAACCGTGC...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACCCTCGGCCATAGAGATAGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCCAAACTCCGTGTAAATaGGGGTGTCCTGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TLGHRDSALAGPFKVVDGQTPCK*GCPGSL
Trigger: AAGAGAGCCAGGACACCCCCATTTACACGGAGTTTG...GCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACTATCTCTATGGCCGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGCTCGGAGGTAGGAGGTaGGCACGTAGCCCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGLGGRR*ARSPRL
Trigger: GAGGCGAGGGCTACGTGCCCACCTCCTACCTCCGAG...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGAAAGTGCATAGGTCCTaGGGCTCCCCGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPKVHRS*GSPWPR
Trigger: TCTGGGCCACGGGGAGCCCCAGGACCTATGCACTTT...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGTTATTTAATGCTTTGTaGCCCTTGTCTGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLLFNAL*PLSAPA
Trigger: AGCGGGAGCAGACAAGGGCCACAAAGCATTAAATAA...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS-3UTR CCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTTGGGAGCCACATCCCTaGCTCAAGAAGAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGWEPHP*LKKRKS
Trigger: GGACTTCCTCTTCTTGAGCCAGGGATGTGGCTCCCA...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600428.5
3UTR CAA 72 bp CTTCTGAAGTTCACGACTGCGTTCTTCCAACTGCTGTaGAAGCCGTTTTCGCTGCTGCTCTGGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLKFTTAFFQLL*KPFSLLLWGQV
Trigger: CACTTGCCCCCAGAGCAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGAACGCAGTCGTGAACTTCAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR TCA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCTGTTTCATCTCTTGTaGGTACTTGGTCAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSLFHLL*VLGQLK
Trigger: CTTGAGCTGACCAAGTACTCACAAGAGATGAAACAG...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCAGCCTTGGTGGCGTTaGTATCCTGGTCTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVQPWWR*YPGLAV
Trigger: AACGGCTAGACCAGGATATCAACGCCACCAAGGCTG...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGTTCATGGGCTGGCTaGAGTCCTCGAATTCCACGT +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPGSWAG*SPRIPR
Trigger: ACGTGGAATTCGAGGACTTCAGCCAGCCCATGAACC...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTCGAAGGTGGGCTTGCTaGTTGGCCTTCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPRRWAC*LAFSTS
Trigger: TGATGTGGAGAAGGCCAAGCAGCAAGCCCACCTTCG...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTTTGCAGCCACCTTCATaGCCTCCAAGCACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGLQPPS*PPSTWL
Trigger: TAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAA...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCACTGCTGTCGGAGGGTaGACGGTTCATGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSTAVGG*TVHGLA
Trigger: AGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGT...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGAGCCGTTTTCGCTGCTaGTCTGGGGGCAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPSRFRC*SGGKWL
Trigger: TAGCCACTTGCCCCCAGAGCAGCAGCGAAAACGGCT...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACTCAGCCGTTCAATGTTaGTCAGGGTTTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDSAVQC*SGFQRS
Trigger: AGATCGCTGAAACCCTGAGCAACATTGAACGGCTGA...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCCACGCCTCATACTTCTaGACTTCCAATTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCHASYF*TSNFSR
Trigger: ACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTG...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp TGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATGGGGGTGTCCTGAGCACTTGGCTATTATaGGCACCACCTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: CGFLLEILIKLRVNGGVLSTWLL*APPPAR
Trigger: CCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCT...CAGGACACCCCCATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCAAAAGGCCAGCGCTTaGTGCGGCTGCGACCCGGGC +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSQKASA*CGCDPG
Trigger: GCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTG...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCCCTCTTCCCGTCTCTaGCAGGGTTCAATTGAGCGT +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVPSSRL*QGSIER
Trigger: ACGCTCAATTGAACCCTGCCAGAGACGGGAAGAGGG...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTCCCTCTTCCCGTCTCTaGCAGGGTTCAATTGAGCGT +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPPSSRL*QGSIER
Trigger: ACGCTCAATTGAACCCTGCCAGAGACGGGAAGAGGG...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCAAAGTGCATAGGTCCTaGGGCTCCCCGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSKVHRS*GSPWPR
Trigger: TCTGGGCCACGGGGAGCCCCAGGACCTATGCACTTT...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCTTGTATAAAACAAAATaGCCGGAGCCGAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCLYKTK*PEPSGR
Trigger: TCTGCCGCTCGGCTCCGGCCATTTTGTTTTATACAA...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCTGTTCCACTTCGGTaGGTTCTTTCACGAACTTTA +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAPVPLR*VLSRTL
Trigger: TAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGG...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCTTGCAGCCACCTTCATaGCCTCCAAGCACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVLQPPS*PPSTWL
Trigger: TAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAA...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCTTGCAGCCACCTTCATaGCCTCCAAGCACTTGGCTA +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSLQPPS*PPSTWL
Trigger: TAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAA...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp TGCCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTGGGATCCACAGCATTTaGAGCCACCTTCATGCCCTC +
Preference number: 4 (lower is better)
Translates to: CQPRLILLHFQFQPFNVAGIHSI*SHLHAL
Trigger: GAGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCC...AGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCAGGGGGTGCCCAGACTaGTGTCGGAGGGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSRGCPD*CRRVHG
Trigger: ACCGTGCACCCTCCGACAGCAGTCTGGGCACCCCCT...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCGAGGCTTGTTCTTCTTaGCAAAAGGCCAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVEACSS*QKASAW
Trigger: CCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTC...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS-3UTR GCA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCAGCCGTTTTCGCTGCTaGTCTGGGGGCAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSSRFRC*SGGKWL
Trigger: TAGCCACTTGCCCCCAGAGCAGCAGCGAAAACGGCT...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCTCTGAAGTTCACGACTaGGTTCTTCCAACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCSEVHD*VLPTAV
Trigger: AACAGCAGTTGGAAGAACGCAGTCGTGAACTTCAGA...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTAAGTCATTCACCTCCTaGAGAATCTGTACGAAGGAC +
Preference number: 4 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAKSFTS*RICTKD
Trigger: GTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTT...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAAGTCATTCACCTCCTaGAGAATCTGTACGAAGGAC +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGKSFTS*RICTKD
Trigger: GTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTT...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACCCTCGGCCATAGAGATAGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCAAGTCATTCACCTCCTaGAGAATCTGTACGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TLGHRDSALAGPFKVVDGKSFTS*RICTKD
Trigger: GTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTT...GCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACTATCTCTATGGCCGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGTGGCGTTGATATCCTaGTCTAGCCGTTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPVALIS*SSRSAV
Trigger: GACTGCTGAACGGCTAGACCAGGATATCAACGCCAC...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CCCTCTTCCCGTCTCTGGCAGGGTTCAATTGAGCGTGACTCGGAGGTAGGAGGTCGTTCATCCATGTCTTaGAGCTTATCGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: PSSRLWQGSIERDSEVGGRSSMS*SLSNIW
Trigger: CCAGATATTCGATAAGCTCCAAGACATGGATGAACG...ACCTCCTACCTCCGAGTCACGCTCAATTGAACCCTGCCAGAGACGGGAAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCTGCCCTCCAAGCACTTaGCTATTATGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSCPPST*LLWAPP
Trigger: AGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCA...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTCGTGGGAGTCGTTCTTaGGATCCACAGCATTTGCAG +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPRGSRS*DPQHLQ
Trigger: CTGCAAATGCTGTGGATCCCAAGAACGACTCCCACG...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGTGGGAGTCGTTCTTaGGATCCACAGCATTTGCAG +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVRGSRS*DPQHLQ
Trigger: CTGCAAATGCTGTGGATCCCAAGAACGACTCCCACG...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTAGCTCTATAAGGACGTaGGAGTCGTTCTTGGGATCC +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGSSIRT*ESFLGS
Trigger: GGATCCCAAGAACGACTCCCACGTCCTTATAGAGCT...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTCAAACTCCGTGTAAATaGGGGTGTCCTGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGQTPCK*GCPGSL
Trigger: AAGAGAGCCAGGACACCCCCATTTACACGGAGTTTG...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCCAGCCTTGGTGGCGTTaGTATCCTGGTCTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSQPWWR*YPGLAV
Trigger: AACGGCTAGACCAGGATATCAACGCCACCAAGGCTG...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTTTGAAGCGCTGCAGTTaGGCCGCATATTCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCLKRCS*AAYSFL
Trigger: CAAAAACGAATATGCGGCTCAACTGCAGCGCTTCAA...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCTTCCAACTGCTGTTaGAGCCGTTTTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPSSNCC*SRFRCC
Trigger: GCAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGA...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTTGGTCAACCTCCTTCTaGAGTTCACGACTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPWSTSF*SSRLRS
Trigger: AGAACGCAGTCGTGAACTTCAGAAGGAGGTTGACCA...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGATGCCCCAATCCATGCTaGTCCCGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRCPNPC*SRRRRR
Trigger: GCGGCGGCGGCGGCGGGAGCAGCATGGATTGGGGCA...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600677.5
CDS-3UTR GCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGGTCCAGCCCCCACTaGGTGTGGCGCTCGAGCACC +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHRSSPH*VWRSST
Trigger: GGTGCTCGAGCGCCACACGCAGTGGGGGCTGGACCT...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCCGCCCTTCTTGGAAGTaGATCTTCCTCTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSRPSWK*IFLSCF
Trigger: GAAACAGGAGAGGAAGATGCACTTCCAAGAAGGGCG...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGCTTGGTGCGGCTaGGACCCGGGCCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHSAWCG*DPGLGV
Trigger: AACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCT...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AGTGGTAGATGGCCACACAGTGACCTATGGGGGATGTGGGTTCCTCCTCGAAATTCAGCCGTTCAATGTTaGTCAGGGTTTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: SGRWPHSDLWGMWVPPRNSAVQC*SGFQRS
Trigger: AGATCGCTGAAACCCTGAGCAACATTGAACGGCTGA...ATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCTGTCTTGTTCTTCTTaGCAAAAGGCCAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVLSCSS*QKASAW
Trigger: CCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGACAG...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
CDS-3UTR CCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTACTCAGGATCATCCTTaGCAGGTCTCTTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPTQDHP*QVSWAD
Trigger: ATCTGCCCAAGAGACCTGCCAAGGATGATCCTGAGT...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTTCTCTTGTGAGTACTTaGTCAGCTCAAGACATACAC +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGSLVST*SAQDIH
Trigger: GTGTATGTCTTGAGCTGACCAAGTACTCACAAGAGA...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp TGCCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTGTGGCGTTGATATCCTaGTCTAGCCGTTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: CQPRLILLHFQFQPFNVAVALIS*SSRSAV
Trigger: GACTGCTGAACGGCTAGACCAGGATATCAACGCCAC...AGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCCGTTCATCCATGTCTTaGAGCTTATCGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCRSSMS*SLSNIW
Trigger: CCAGATATTCGATAAGCTCCAAGACATGGATGAACG...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp TGCCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTTGCCCTCCAAGCACTTaGCTATTATGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: CQPRLILLHFQFQPFNVACPPST*LLWAPP
Trigger: AGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCA...AGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGCTTCAGAGCTCTCCTTaGTGTCCTGTGATGCGCTGT +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPLQSSP*CPVMRC
Trigger: ACAGCGCATCACAGGACACCAAGGAGAGCTCTGAAG...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTCTTCAAAGTGGTAGATaGCCACACAGTGACCTATGG +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGLQSGR*PHSDLW
Trigger: CCATAGGTCACTGTGTGGCCATCTACCACTTTGAAG...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACCTATGGGGGATGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATCCCTCTTCCCGTCTCTaGCAGGGTTCAATTGAGCGT +
Preference number: 4 (lower is better)
Translates to: TYGGCGFLLEILIKLRVNPSSRL*QGSIER
Trigger: ACGCTCAATTGAACCCTGCCAGAGACGGGAAGAGGG...ATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTCCAATTGCCTCACTCTaGAATAAAAGGCTTAGCCTA +
Preference number: 4 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGPIASL*NKRLSL
Trigger: TAGGCTAAGCCTTTTATTCCAGAGTGAGGCAATTGG...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS-3UTR TCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTTTGAAGCGCTGCAGTTaGGCCGCATATTCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPLKRCS*AAYSFL
Trigger: CAAAAACGAATATGCGGCTCAACTGCAGCGCTTCAA...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCTTGAAGCGCTGCAGTTaGGCCGCATATTCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSLKRCS*AAYSFL
Trigger: CAAAAACGAATATGCGGCTCAACTGCAGCGCTTCAA...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp TGCCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTTGGTCAACCTCCTTCTaGAGTTCACGACTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: CQPRLILLHFQFQPFNVAWSTSF*SSRLRS
Trigger: AGAACGCAGTCGTGAACTTCAGAAGGAGGTTGACCA...AGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR TCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGACTCCCTCTTTCCGCCTaGCCCGGGTCCAGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRLPLSA*PGSSRP
Trigger: GGGACGGCTGGACCCGGGTCAGGCGGAAAGAGGGAG...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTAAAACAGGTCAGGCCTaGACAGATGCGTGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPKTGQA*TDACVY
Trigger: GTAAACACACGCATCTGTTCAGGCCTGACCTGTTTT...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS-3UTR GCA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTCCTGTTCCACTTCGGTaGGTTCTTTCACGAACTTTA +
Preference number: 4 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCPVPLR*VLSRTL
Trigger: TAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGG...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCCAGGCGGGTGGCCCTaGGTTCATCCATGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSPGGWP*VHPCLG
Trigger: TCCAAGACATGGATGAACGCAGGGCCACCCGCCTGG...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGCAAAACCTGACTTGTaGAGCTCTATAAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSAKPDL*SSIRTW
Trigger: CCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGC...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGGGGGTGCCCAGACTaGTGTCGGAGGGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHRGCPD*CRRVHG
Trigger: ACCGTGCACCCTCCGACAGCAGTCTGGGCACCCCCT...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCTCAGCCGTTCAATGTTaGTCAGGGTTTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVSAVQC*SGFQRS
Trigger: AGATCGCTGAAACCCTGAGCAACATTGAACGGCTGA...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCCACGCCTCATACTTCTaGACTTCCAATTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSHASYF*TSNFSR
Trigger: ACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTG...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACGTGATGCGCTGTTGCTaGTGCTGTCTGGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHVMRCC*CCLAGR
Trigger: GCGCCCCGCCAGACAGCAGCAGCAACAGCGCATCAC...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCCCCACTGCGTGTaGCGCTCGAGCACCTCGAAC +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHSPHCV*RSSTSN
Trigger: GTTCGAGGTGCTCGAGCGCCACACGCAGTGGGGGCT...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCACGAAGGACTGTTGCTaGCTGAATTTGGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVTKDCC*LNLDSG
Trigger: TCCTGAGTCCAAATTCAGCCAGCAACAGTCCTTCGT...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCAGCCGTTCAGCAGTCTaGGCTGCCTTCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSSRSAV*AAFSAS
Trigger: GGAGGCAGAGAAGGCAGCCCAGACTGCTGAACGGCT...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTGGCGTTGATATCCTaGTCTAGCCGTTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSVALIS*SSRSAV
Trigger: GACTGCTGAACGGCTAGACCAGGATATCAACGCCAC...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTGTCTTCTCATAGACATCCTTCATTTTCTTTAGGGCTTCCCTCTGGTCAACCTGGTGGGCTTGCTGCTTaGCCTTCTCCACATCAGCCT +
Preference number: 4 (lower is better)
Translates to: VSSHRHPSFSLGLPSGQPGGLAA*PSPHQP
Trigger: AGGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACC...AGGTTGACCAGAGGGAAGCCCTAAAGAAAATGAAGGATGTCTATGAGAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGGCACGGTTCATGGGCTaGCTGAAGTCCTCGAATTCC +
Preference number: 4 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGARFMG*LKSSNS
Trigger: GGAATTCGAGGACTTCAGCCAGCCCATGAACCGTGC...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGCAAACTCCGTGTAAATaGGGGTGTCCTGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPQTPCK*GCPGSL
Trigger: AAGAGAGCCAGGACACCCCCATTTACACGGAGTTTG...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGACCTATGGGGGATGTaGGTTCCTCCTCGAAATCCT +
Preference number: 4 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSDLWGM*VPPRNP
Trigger: AGGATTTCGAGGAGGAACCCACATCCCCCATAGGTC...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCCTTCAAAGTGGTAGATaGCCACACAGTGACCTATGG +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSLQSGR*PHSDLW
Trigger: CCATAGGTCACTGTGTGGCCATCTACCACTTTGAAG...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACCTCGGAGGTAGGAGGTaGGCACGTAGCCCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHLGGRR*ARSPRL
Trigger: GAGGCGAGGGCTACGTGCCCACCTCCTACCTCCGAG...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
3UTR CAA 72 bp TCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTaGCTCAGGGTTTCAGCGATCTGGGGCTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SYFCTSNFSRSM*LRVSAIWGSKL
Trigger: CAGCTTGGAGCCCCAGATCGCTGAAACCCTGAGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR TCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTTGAAGCGCTGCAGTTaGGCCGCATATTCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPLKRCS*AAYSFL
Trigger: CAAAAACGAATATGCGGCTCAACTGCAGCGCTTCAA...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCTCCTTGGTGTCCTGTaGTGCGCTGTTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSLLGVL*CAVAAA
Trigger: AGCAGCAGCAACAGCGCATCACAGGACACCAAGGAG...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACCCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHPFSSC*WARRPS
Trigger: AGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGG...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCCCGCATATTCGTTTTTaGTTTCTTCGGCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSPHIRF*FLRPCD
Trigger: GTCACATGGCCGAAGAAAGCAAAAACGAATATGCGG...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTCAGCAAAACCTGACTTGTaGAGCTCTATAAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: PATPHTSALPISAVQCCSAKPDL*SSIRTW
Trigger: CCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGC...TGAGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCTCTGAAGTTCACGACTaGGTTCTTCCAACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSSEVHD*VLPTAV
Trigger: AACAGCAGTTGGAAGAACGCAGTCGTGAACTTCAGA...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCAGGCCTGAACAGATaGGTGTGTTTACCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPSGLNR*VCLPKA
Trigger: GGCTTTTGGTAAACACACGCATCTGTTCAGGCCTGA...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS-3UTR CCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCAAGTCATTCACCTCCTaGAGAATCTGTACGAAGGAC +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVKSFTS*RICTKD
Trigger: GTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTT...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCAAGTCATTCACCTCCTaGAGAATCTGTACGAAGGAC +
Preference number: 4 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSKSFTS*RICTKD
Trigger: GTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTT...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTGCCCTCCAAGCACTTaGCTATTATGGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGCPPST*LLWAPP
Trigger: AGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCA...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGCTTCAAAGTGGTAGATaGCCACACAGTGACCTATGG +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPLQSGR*PHSDLW
Trigger: CCATAGGTCACTGTGTGGCCATCTACCACTTTGAAG...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTTATGTACATCAATGGTaGAACGATGGTAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGYVHQW*NDGRRH
Trigger: GTGCCTTCTACCATCGTTCCACCATTGATGTACATA...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTTGTATAAAACAAAATaGCCGGAGCCGAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPLYKTK*PEPSGR
Trigger: TCTGCCGCTCGGCTCCGGCCATTTTGTTTTATACAA...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGACGGGTCCGTCCGGTGTaGCAGGTAGGACTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRRVRPV*QVGLGW
Trigger: CCAACCCAGTCCTACCTGTCACACCGGACGGACCCG...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp CCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTCACCGCATATTCGTTTTTaGTTTCTTCGGCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: PATPHTSALPISAVQCCSPHIRF*FLRPCD
Trigger: GTCACATGGCCGAAGAAAGCAAAAACGAATATGCGG...TGAGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGATCCACAGCATTTaGAGCCACCTTCATGCCCTC +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSGIHSI*SHLHAL
Trigger: GAGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCC...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCTGAAGTTCACGACTaGGTTCTTCCAACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPSEVHD*VLPTAV
Trigger: AACAGCAGTTGGAAGAACGCAGTCGTGAACTTCAGA...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAGTGATGCGCTGTTGCTaGTGCTGTCTGGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRVMRCC*CCLAGR
Trigger: GCGCCCCGCCAGACAGCAGCAGCAACAGCGCATCAC...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGCCCCCACTGCGTGTaGCGCTCGAGCACCTCGAAC +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRSPHCV*RSSTSN
Trigger: GTTCGAGGTGCTCGAGCGCCACACGCAGTGGGGGCT...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCACGAAGGACTGTTGCTaGCTGAATTTGGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSTKDCC*LNLDSG
Trigger: TCCTGAGTCCAAATTCAGCCAGCAACAGTCCTTCGT...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp ACCTATGGGGGATGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATACGAAGGACTGTTGCTaGCTGAATTTGGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: TYGGCGFLLEILIKLRVNTKDCC*LNLDSG
Trigger: TCCTGAGTCCAAATTCAGCCAGCAACAGTCCTTCGT...ATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp CGAAATCCTCATCAAACTCCGTGTAAATGGGGGTGTCCTGGCTCTCTTCTGAGGTCTCTTGTGAGTACTTaGTCAGCTCAAGACATACAC +
Preference number: 4 (lower is better)
Translates to: RNPHQTPCKWGCPGSLLRSLVST*SAQDIH
Trigger: GTGTATGTCTTGAGCTGACCAAGTACTCACAAGAGA...CCTCAGAAGAGAGCCAGGACACCCCCATTTACACGGAGTTTGATGAGGATTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACGCCCGCCGCCCTTCTTaGAAGTGCATCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHARRPS*KCIFLS
Trigger: GGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGC...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCGTTCAGCAGTCTaGGCTGCCTTCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHSRSAV*AAFSAS
Trigger: GGAGGCAGAGAAGGCAGCCCAGACTGCTGAACGGCT...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCCACACAGTGACCTATaGGGGATGTGGGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSPHSDL*GMWVPP
Trigger: AGGAGGAACCCACATCCCCCATAGGTCACTGTGTGG...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCCCTCTTCCCGTCTCTaGCAGGGTTCAATTGAGCGT +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSPSSRL*QGSIER
Trigger: ACGCTCAATTGAACCCTGCCAGAGACGGGAAGAGGG...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCGAGTATGTACATCAATaGTGGAACGATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVEYVHQ*WNDGRR
Trigger: CCTTCTACCATCGTTCCACCATTGATGTACATACTC...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACCTTTCTTCGGCCATGTaGCTCCGAAGGTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHLSSAM*LRRWAC
Trigger: GCAAGCCCACCTTCGGAGTCACATGGCCGAAGAAAG...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAGGGCTTGGTCTCGGTTaGAGCGCTGCAGTTGAGCCG +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRGLGLG*SAAVEP
Trigger: CGGCTCAACTGCAGCGCTTCAACCGAGACCAAGCCC...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGACCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRPFSSC*WARRPS
Trigger: AGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGG...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GTGTCTTCTCATAGACATCCTTCATTTTCTTTAGGGCTTCCCTCTGGTCAACCTAAGGCTTGTTCTTCTTaGCAAAAGGCCAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: VSSHRHPSFSLGLPSGQPKACSS*QKASAW
Trigger: CCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTT...AGGTTGACCAGAGGGAAGCCCTAAAGAAAATGAAGGATGTCTATGAGAAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGTGGCGTTGATATCCTaGTCTAGCCGTTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSVALIS*SSRSAV
Trigger: GACTGCTGAACGGCTAGACCAGGATATCAACGCCAC...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACGGTGGGCTTGCTGCTTaGCCTTCTCCACATCAGCCT +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHGGLAA*PSPHQP
Trigger: AGGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACC...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGCGTTCATCCATGTCTTaGAGCTTATCGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPRSSMS*SLSNIW
Trigger: CCAGATATTCGATAAGCTCCAAGACATGGATGAACG...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGACCTATGGGGGATGTaGGTTCCTCCTCGAAATCCT +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSDLWGM*VPPRNP
Trigger: AGGATTTCGAGGAGGAACCCACATCCCCCATAGGTC...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTCATATGTACATCAATGGTaGAACGATGGTAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PATPHTSALPISAVQCCSYVHQW*NDGRRH
Trigger: GTGCCTTCTACCATCGTTCCACCATTGATGTACATA...TGAGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CCA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGGAGTATGTACATCAATaGTGGAACGATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPEYVHQ*WNDGRR
Trigger: CCTTCTACCATCGTTCCACCATTGATGTACATACTC...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp CCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTCAGAGTATGTACATCAATaGTGGAACGATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: PATPHTSALPISAVQCCSEYVHQ*WNDGRR
Trigger: CCTTCTACCATCGTTCCACCATTGATGTACATACTC...TGAGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR GCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACCGAAGGTGGGCTTGCTaGTTGGCCTTCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHRRWAC*LAFSTS
Trigger: TGATGTGGAGAAGGCCAAGCAGCAAGCCCACCTTCG...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCAAACTCCGTGTAAATaGGGGTGTCCTGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSQTPCK*GCPGSL
Trigger: AAGAGAGCCAGGACACCCCCATTTACACGGAGTTTG...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGAGTATGTACATCAATaGTGGAACGATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSEYVHQ*WNDGRR
Trigger: CCTTCTACCATCGTTCCACCATTGATGTACATACTC...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGCCGTTTTCGCTGCTaGTCTGGGGGCAAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRSRFRC*SGGKWL
Trigger: TAGCCACTTGCCCCCAGAGCAGCAGCGAAAACGGCT...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCTCTTGTGAGTACTTaGTCAGCTCAAGACATACAC +
Preference number: 4 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGSLVST*SAQDIH
Trigger: GTGTATGTCTTGAGCTGACCAAGTACTCACAAGAGA...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAGGTGGGCTTGCTGCTTaGCCTTCTCCACATCAGCCT +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRGGLAA*PSPHQP
Trigger: AGGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACC...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACCGTGGGAGTCGTTCTTaGGATCCACAGCATTTGCAG +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHRGSRS*DPQHLQ
Trigger: CTGCAAATGCTGTGGATCCCAAGAACGACTCCCACG...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTATGTACATCAATGGTaGAACGATGGTAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGYVHQW*NDGRRH
Trigger: GTGCCTTCTACCATCGTTCCACCATTGATGTACATA...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCTTGTATAAAACAAAATaGCCGGAGCCGAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSLYKTK*PEPSGR
Trigger: TCTGCCGCTCGGCTCCGGCCATTTTGTTTTATACAA...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGACGGGCGGGCAAAACCTaGCTTGTGCAGCTCTATAAG +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRRAGKT*LVQLYK
Trigger: CTTATAGAGCTGCACAAGTCAGGTTTTGCCCGCCCG...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR TCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACTGGTCAACCTCCTTCTaGAGTTCACGACTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHWSTSF*SSRLRS
Trigger: AGAACGCAGTCGTGAACTTCAGAAGGAGGTTGACCA...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCCGCATATTCGTTTTTaGTTTCTTCGGCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSPHIRF*FLRPCD
Trigger: GTCACATGGCCGAAGAAAGCAAAAACGAATATGCGG...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCTCTGAAGTTCACGACTaGGTTCTTCCAACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSSEVHD*VLPTAV
Trigger: AACAGCAGTTGGAAGAACGCAGTCGTGAACTTCAGA...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACGCAAAACCTGACTTGTaGAGCTCTATAAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHAKPDL*SSIRTW
Trigger: CCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGC...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAGGCTCCGCAGTTGTTTaGCGTAAGCCTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRGSAVV*RKPVPL
Trigger: AAGTGGAACAGGCTTACGCCAAACAACTGCGGAGCC...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCTCTCTTGTGAGTACTTaGTCAGCTCAAGACATACAC +
Preference number: 4 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSSLVST*SAQDIH
Trigger: GTGTATGTCTTGAGCTGACCAAGTACTCACAAGAGA...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACCCTGTTCCACTTCGGTaGGTTCTTTCACGAACTTTA +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHPVPLR*VLSRTL
Trigger: TAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGG...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGACTGTCTTGTTCTTCTTaGCAAAAGGCCAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRLSCSS*QKASAW
Trigger: CCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGACAG...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
CDS-3UTR CCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGACAAACTCCGTGTAAATaGGGGTGTCCTGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRQTPCK*GCPGSL
Trigger: AAGAGAGCCAGGACACCCCCATTTACACGGAGTTTG...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACTATGTACATCAATGGTaGAACGATGGTAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHYVHQW*NDGRRH
Trigger: GTGCCTTCTACCATCGTTCCACCATTGATGTACATA...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGACCTGTTCCACTTCGGTaGGTTCTTTCACGAACTTTA +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRPVPLR*VLSRTL
Trigger: TAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGG...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR GCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGACCGCATATTCGTTTTTaGTTTCTTCGGCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRPHIRF*FLRPCD
Trigger: GTCACATGGCCGAAGAAAGCAAAAACGAATATGCGG...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGACGTTCATCCATGTCTTaGAGCTTATCGAATATCTGG +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRRSSMS*SLSNIW
Trigger: CCAGATATTCGATAAGCTCCAAGACATGGATGAACG...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CCA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAGAGTATGTACATCAATaGTGGAACGATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGREYVHQ*WNDGRR
Trigger: CCTTCTACCATCGTTCCACCATTGATGTACATACTC...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS CCA 90 bp GGGTCCCGGCCCCCACCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTaGTGCGGCTGCGACCCGGGCCTCGGAGTTCAGGCCGTCCATCCG +
Preference number: 5 (lower is better)
Translates to: GSRPPPCSSCQKASA*CGCDPGLGVQAVHP
Trigger: CGGATGGACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGGTGGGGGCCGGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600491.5
CDS GCA 90 bp GGCGAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTGGTGCGGCTaGGACCCGGGCCTCGGAGTTCAGGCCGTCCATCCGAGGGGGTGC +
Preference number: 5 (lower is better)
Translates to: GEACSSCQKASAWCG*DPGLGVQAVHPRGC
Trigger: GCACCCCCTCGGATGGACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS GCA 90 bp TCCCGGCCCCCACCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTGGTaGGGCTGCGACCCGGGCCTCGGAGTTCAGGCCGTCCATCCGAGG +
Preference number: 5 (lower is better)
Translates to: SRPPPCSSCQKASAW*GCDPGLGVQAVHPR
Trigger: CCTCGGATGGACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGGTGGGGGCCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600491.5
CDS GCA 90 bp TCGAAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTGGTGCGGCTaGGACCCGGGCCTCGGAGTTCAGGCCGTCCATCCGAGGGGGTGC +
Preference number: 5 (lower is better)
Translates to: SKACSSCQKASAWCG*DPGLGVQAVHPRGC
Trigger: GCACCCCCTCGGATGGACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTTCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS GCA 90 bp GCTGCCTCGAAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTGGTaGGGCTGCGACCCGGGCCTCGGAGTTCAGGCCGTCCATCCGAGG +
Preference number: 5 (lower is better)
Translates to: AASKACSSCQKASAW*GCDPGLGVQAVHPR
Trigger: CCTCGGATGGACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTTCGAGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS GCA 90 bp AAGGTGGGTAGAGGGCCCACGGCTGCCTCGAAGGCTTGTTCTTCTTaGCAAAAGGCCAGCGCTTGGTGCGGCTGCGACCCGGGCCTCGGA +
Preference number: 5 (lower is better)
Translates to: KVGRGPTAASKACSS*QKASAWCGCDPGLG
Trigger: TCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTTCGAGGCAGCCGTGGGCCCTCTACCCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS CCA 90 bp GAGGGGGTGCCCAGACTGCTGTCGGAGGGTGCACGGTTCATGGGCTaGCTGAAGTCCTCGAATTCCACGTCGCCCGGGCGGGCAAAACCT +
Preference number: 5 (lower is better)
Translates to: EGVPRLLSEGARFMG*LKSSNSTSPGRAKP
Trigger: AGGTTTTGCCCGCCCGGGCGACGTGGAATTCGAGGACTTCAGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGTCTGGGCACCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 90 bp ACGGCTGCCTCGAAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTaGTGCGGCTGCGACCCGGGCCTCGGAGTTCAGGCCGTCCATCCG +
Preference number: 5 (lower is better)
Translates to: TAASKACSSCQKASA*CGCDPGLGVQAVHP
Trigger: CGGATGGACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTTCGAGGCAGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGCCAAAAGGCCAGCGCTaGGTGCGGCTGCGACCCGGG +
Preference number: 5 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLPKGQR*VRLRPG
Trigger: CCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGG...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS TCA 90 bp GGGTGCCCAGACTGCTGTCGGAGGGTGCACGGTTCATGGGCTGGCTaGAGTCCTCGAATTCCACGTCGCCCGGGCGGGCAAAACCTGACT +
Preference number: 5 (lower is better)
Translates to: GCPDCCRRVHGSWAG*SPRIPRRPGGQNLT
Trigger: AGTCAGGTTTTGCCCGCCCGGGCGACGTGGAATTCGAGGACTTCAGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGTCTGGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 90 bp TTCAGGCCGTCCATCCGAGGGGGTGCCCAGACTGCTGTCGGAGGGTaGACGGTTCATGGGCTGGCTGAAGTCCTCGAATTCCACGTCGCC +
Preference number: 5 (lower is better)
Translates to: FRPSIRGGAQTAVGG*TVHGLAEVLEFHVA
Trigger: GGCGACGTGGAATTCGAGGACTTCAGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGTCTGGGCACCCCCTCGGATGGACGGCCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS TCA 90 bp AGGTTCGTCCCACTAATGGTCTGGTCCCTCCGGCCACAGGGCGGATaGGAGGGTTTCGATCCAACCCAGGACGCGCCTTCGCCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: RFVPLMVWSLRPQGG*EGFDPTQDAPSPRP
Trigger: TGGCCTTGGCGAAGGCGCGTCCTGGGTTGGATCGAAACCCTCTCATCCGCCCTGTGGCCGGAGGGACCAGACCATTAGTGGGACGAACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596543.5
CDS GCA 90 bp CCTTCCTTCCCTCCAGTCCGGGCTGGCAGCCAAGAGGAAAATTCCTaGCCGAGACTCGGCGTTCAGGCGGCTGGGGCTGACTCAATAGGG +
Preference number: 5 (lower is better)
Translates to: PSFPPVRAGSQEENS*PRLGVQAAGADSIG
Trigger: CCCTATTGAGTCAGCCCCAGCCGCCTGAACGCCGAGTCTCGGGCAGGAATTTTCCTCTTGGCTGCCAGCCCGGACTGGAGGGAAGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600491.5
CDS CCA 90 bp CCAGCTCGGCCTCCGACAGGAGCCCATACCCGGCACCCAGGCGGGTaGCCCTGCGTTCATCCATGTCTTGGAGCTTATCGAATATCTGGG +
Preference number: 5 (lower is better)
Translates to: PARPPTGAHTRHPGG*PCVHPCLGAYRISG
Trigger: CCCAGATATTCGATAAGCTCCAAGACATGGATGAACGCAGGGCCACCCGCCTGGGTGCCGGGTATGGGCTCCTGTCGGAGGCCGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGGCACGTAGCCCTCGCCTCCCTCTTTCCGCCTGACCCGGGTCCAGCCGTCCCCTGTTGCTGGCTGAATTaGGACTCAGGATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: GHVALASLFPPDPGPAVPCCWLN*DSGSSL
Trigger: CAAGGATGATCCTGAGTCCAAATTCAGCCAGCAACA...GGGGACGGCTGGACCCGGGTCAGGCGGAAAGAGGGAGGCGAGGGCTACGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGGCCCGCCGCCCTTCTaGGAAGTGCATCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGGPPPF*EVHLPL
Trigger: GAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCC...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGGGCCCGCCGCCCTTCTaGGAAGTGCATCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGGPPPF*EVHLPL
Trigger: GAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCC...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGAGGTGGGCTTGCTGCTaGGCCTTCTCCACATCAGCC +
Preference number: 5 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVRWACC*AFSTSA
Trigger: GGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACCT...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGACTCCGAAGGTGGGCTaGCTGCTTGGCCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVTPKVG*LLGLLH
Trigger: GTGGAGAAGGCCAAGCAGCAAGCCCACCTTCGGAGT...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACCCAAAAGGCCAGCGCTaGGTGCGGCTGCGACCCGGG +
Preference number: 5 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDPKGQR*VRLRPG
Trigger: CCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGG...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGTCCTGTGATGCGCTGTaGCTGCTGCTGTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGSCDAL*LLLSGG
Trigger: CCCGCCAGACAGCAGCAGCAACAGCGCATCACAGGA...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS TCA 90 bp GTCAAGGGAGTACTGGAAGCCTATGGGGGAGGGAAGGTCCAGGTCTaGCAAAGAGGGCAGCTCCCTGACTCCGGATCCGCAACCCTGCCC +
Preference number: 5 (lower is better)
Translates to: VKGVLEAYGGGKVQV*QRGQLPDSGSATLP
Trigger: GGGCAGGGTTGCGGATCCGGAGTCAGGGAGCTGCCCTCTTTGTCAGACCTGGACCTTCCCTCCCCCATAGGCTTCCAGTACTCCCTTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596078.5
CDS GCA 90 bp CGGCCTCCGACAGGAGCCCATACCCGGCACCCAGGCGGGTGGCCCTaGGTTCATCCATGTCTTGGAGCTTATCGAATATCTGGGGCATCT +
Preference number: 5 (lower is better)
Translates to: RPPTGAHTRHPGGWP*VHPCLGAYRISGAS
Trigger: AGATGCCCCAGATATTCGATAAGCTCCAAGACATGGATGAACGCAGGGCCACCCGCCTGGGTGCCGGGTATGGGCTCCTGTCGGAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 90 bp CAGCATTTGCAGCCACCTTCATGCCCTCCAAGCACTTGGCTATTATaGGCACCACCTCCAGCTCGGCCTCCGACAGGAGCCCATACCCGG +
Preference number: 5 (lower is better)
Translates to: QHLQPPSCPPSTWLL*APPPARPPTGAHTR
Trigger: CCGGGTATGGGCTCCTGTCGGAGGCCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAAATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGCACCAGGCTCCGCAGTaGTTTGGCGTAAGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGHQAPQ*FGVSLF
Trigger: GAACAGGCTTACGCCAAACAACTGCGGAGCCTGGTG...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGCACCAGGCTCCGCAGTaGTTTGGCGTAAGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGHQAPQ*FGVSLF
Trigger: GAACAGGCTTACGCCAAACAACTGCGGAGCCTGGTG...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGGCACGTAGCCCTCGCCTCCCTCTTTCCGCCTGACCCGGGTCCAGCCGTCCCCATCTCTTGTGAGTACTaGGTCAGCTCAAGACATACA +
Preference number: 5 (lower is better)
Translates to: GHVALASLFPPDPGPAVPISCEY*VSSRHT
Trigger: TGTATGTCTTGAGCTGACCAAGTACTCACAAGAGAT...GGGGACGGCTGGACCCGGGTCAGGCGGAAAGAGGGAGGCGAGGGCTACGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGTCAGCCTTGGTGGCGTaGATATCCTGGTCTAGCCGT +
Preference number: 5 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVSALVA*ISWSSR
Trigger: ACGGCTAGACCAGGATATCAACGCCACCAAGGCTGA...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTGTGGGATCCACAGCATTaGCAGCCACCTTCATGCCCT +
Preference number: 5 (lower is better)
Translates to: VEGTAGPSGVTGRTGLGVWDPQH*QPPSCP
Trigger: AGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCA...CACCCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS GCA 90 bp TGCTGCTCTGGGGGCAAGTGGCTAAAATCCTCGGTCACCACTGTCTaGAAGGTGGGTAGAGGGCCCACGGCTGCCTCGAAGGCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: CCSGGKWLKSSVTTV*KVGRGPTAASKACS
Trigger: AGAACAAGCCTTCGAGGCAGCCGTGGGCCCTCTACCCACCTTGCAGACAGTGGTGACCGAGGATTTTAGCCACTTGCCCCCAGAGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS CCA 90 bp TGCTGCTTGGCCTTCTCCACATCAGCCTTGGTGGCGTTGATATCCTaGTCTAGCCGTTCAGCAGTCTGGGCTGCCTTCTCTGCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: CCLAFSTSALVALIS*SSRSAVWAAFSASR
Trigger: CCGGGAGGCAGAGAAGGCAGCCCAGACTGCTGAACGGCTAGACCAGGATATCAACGCCACCAAGGCTGATGTGGAGAAGGCCAAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 90 bp TGGGATCCACAGCATTTGCAGCCACCTTCATGCCCTCCAAGCACTTaGCTATTATGGGCACCACCTCCAGCTCGGCCTCCGACAGGAGCC +
Preference number: 5 (lower is better)
Translates to: WDPQHLQPPSCPPST*LLWAPPPARPPTGA
Trigger: GGCTCCTGTCGGAGGCCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTGGCCCGCCGCCCTTCTaGGAAGTGCATCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGGPPPF*EVHLPL
Trigger: GAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCC...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGTCAGCCTTGGTGGCGTaGATATCCTGGTCTAGCCGT +
Preference number: 5 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGSALVA*ISWSSR
Trigger: ACGGCTAGACCAGGATATCAACGCCACCAAGGCTGA...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTCAGCCTTGGTGGCGTaGATATCCTGGTCTAGCCGT +
Preference number: 5 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGSALVA*ISWSSR
Trigger: ACGGCTAGACCAGGATATCAACGCCACCAAGGCTGA...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTCCAAAAGGCCAGCGCTaGGTGCGGCTGCGACCCGGG +
Preference number: 5 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPPKGQR*VRLRPG
Trigger: CCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGG...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCTCCTGTGATGCGCTGTaGCTGCTGCTGTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCSCDAL*LLLSGG
Trigger: CCCGCCAGACAGCAGCAGCAACAGCGCATCACAGGA...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTTCCTGTGATGCGCTGTaGCTGCTGCTGTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: QVSAEATGSEIKCIGPGASCDAL*LLLSGG
Trigger: CCCGCCAGACAGCAGCAGCAACAGCGCATCACAGGA...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAGACTGAGGTCTTCACCCTCGGCCATAGAGATAGTGCCCTCGCTGGACCCTTCTCCTGTGATGCGCTGTaGCTGCTGCTGTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: KTEVFTLGHRDSALAGPFSCDAL*LLLSGG
Trigger: CCCGCCAGACAGCAGCAGCAACAGCGCATCACAGGA...GAAGGGTCCAGCGAGGGCACTATCTCTATGGCCGAGGGTGAAGACCTCAGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGTCTTCAGAGCTCTCCTaGGTGTCCTGTGATGCGCTG +
Preference number: 5 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGSSELS*VSCDAL
Trigger: CAGCGCATCACAGGACACCAAGGAGAGCTCTGAAGA...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS TCA 90 bp GGTGGGCTTGCTGCTTGGCCTTCTCCACATCAGCCTTGGTGGCGTTaGTATCCTGGTCTAGCCGTTCAGCAGTCTGGGCTGCCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: GGLAAWPSPHQPWWR*YPGLAVQQSGLPSL
Trigger: CAGAGAAGGCAGCCCAGACTGCTGAACGGCTAGACCAGGATATCAACGCCACCAAGGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 90 bp TCAGCCTTGGTGGCGTTGATATCCTGGTCTAGCCGTTCAGCAGTCTaGGCTGCCTTCTCTGCCTCCCGGCAGTCCCGCTCAAATTTACGC +
Preference number: 5 (lower is better)
Translates to: SALVALISWSSRSAV*AAFSASRQSRSNLR
Trigger: GCGTAAATTTGAGCGGGACTGCCGGGAGGCAGAGAAGGCAGCCCAGACTGCTGAACGGCTAGACCAGGATATCAACGCCACCAAGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTGGGCTTGCTGCTaGGCCTTCTCCACATCAGCC +
Preference number: 5 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDRWACC*AFSTSA
Trigger: GGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACCT...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGTGGGCTTGCTGCTaGGCCTTCTCCACATCAGCC +
Preference number: 5 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGRWACC*AFSTSA
Trigger: GGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACCT...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGACGTGGGAGTCGTTCTaGGGATCCACAGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGTWESF*GSTAFA
Trigger: TGCAAATGCTGTGGATCCCAAGAACGACTCCCACGT...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGGGGTCCAGCCGTCCCCTTaGTCTTCTTCCATAAGACTG +
Preference number: 5 (lower is better)
Translates to: MVEGTAGPSGVTGRTGLGVQPSP*SSSIRL
Trigger: CAGTCTTATGGAAGAAGACAAAGGGGACGGCTGGAC...CCCCAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS TCA 90 bp CTGGCTGAAGTCCTCGAATTCCACGTCGCCCGGGCGGGCAAAACCTaGCTTGTGCAGCTCTATAAGGACGTGGGAGTCGTTCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: LAEVLEFHVARAGKT*LVQLYKDVGVVLGI
Trigger: GATCCCAAGAACGACTCCCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCGCCCGGGCGACGTGGAATTCGAGGACTTCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 90 bp CGTGGGAGTCGTTCTTGGGATCCACAGCATTTGCAGCCACCTTCATaGCCTCCAAGCACTTGGCTATTATGGGCACCACCTCCAGCTCGG +
Preference number: 5 (lower is better)
Translates to: RGSRSWDPQHLQPPS*PPSTWLLWAPPPAR
Trigger: CCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCAAGAACGACTCCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS-3UTR CAA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGGCCCGCCGCCCTTCTaGGAAGTGCATCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCGPPPF*EVHLPL
Trigger: GAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCC...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCTGGGATCCACAGCATTaGCAGCCACCTTCATGCCCT +
Preference number: 5 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSWDPQH*QPPSCP
Trigger: AGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCA...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGCGGGCAAAACCTGACTaGTGCAGCTCTATAAGGACG +
Preference number: 5 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLRAKPD*CSSIRT
Trigger: CGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCG...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCCCAAAAGGCCAGCGCTaGGTGCGGCTGCGACCCGGG +
Preference number: 5 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSPKGQR*VRLRPG
Trigger: CCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGG...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTCTTCCAACTGCTGTaGAAGCCGTTTTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGFFQLL*KPFSLL
Trigger: CAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGAA...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGACTGTCTTGTTCTTCTaGCCAAAAGGCCAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGTVLFF*PKGQRL
Trigger: CAAGCGCTGGCCTTTTGGCAAGAAGAACAAGACAGT...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
CDS-3UTR CAA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTCGGTCACCACTGTCTaGTTCTTCTTGCCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGSVTTV*FFLPKG
Trigger: GCCTTTTGGCAAGAAGAACAAGACAGTGGTGACCGA...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
CDS-3UTR CAA 90 bp ACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGTTGGAAGGCTTGTTCTTCTaGCCAAAAGGCCAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: TMVEGTAGPSGVTGRTGLEGLFF*PKGQRL
Trigger: CAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTTC...CAACCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS GCA 90 bp AAGTCCTCGAATTCCACGTCGCCCGGGCGGGCAAAACCTGACTTGTaGAGCTCTATAAGGACGTGGGAGTCGTTCTTGGGATCCACAGCA +
Preference number: 5 (lower is better)
Translates to: KSSNSTSPGRAKPDL*SSIRTWESFLGSTA
Trigger: TGCTGTGGATCCCAAGAACGACTCCCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCGCCCGGGCGACGTGGAATTCGAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 90 bp TCAGAGCTGTTTGGGGATAATTCGGCAGATAAAGACAGGCCCTCCTaGGACCCTGGGAACAGACCCACTCTGACGTCACCCCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: SELFGDNSADKDRPS*DPGNRPTLTSPLTS
Trigger: AGAGGTGAGGGGTGACGTCAGAGTGGGTCTGTTCCCAGGGTCCCAGGAGGGCCTGTCTTTATCTGCCGAATTATCCCCAAACAGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595305.5
CDS-3UTR CAA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTTCAGCCTTGGTGGCGTaGATATCCTGGTCTAGCCGT +
Preference number: 5 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGSALVA*ISWSSR
Trigger: ACGGCTAGACCAGGATATCAACGCCACCAAGGCTGA...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCTTCTCCACATCAGCCTaGGTGGCGTTGATATCCTGG +
Preference number: 5 (lower is better)
Translates to: VSAEATGSEIKCIGPGAPFSTSA*VALISW
Trigger: CCAGGATATCAACGCCACCAAGGCTGATGTGGAGAA...GGGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTATGCCCTCCAAGCACTaGGCTATTATGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAMPSKH*AIMGTT
Trigger: GGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCAT...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCAGGCTGTCTCCCCGGTaGCTAAGGACTCGACTTTCA +
Preference number: 5 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCRLSPR*LRTRLS
Trigger: TGAAAGTCGAGTCCTTAGCAACCGGGGAGACAGCCT...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCCACACAGTGACCTATGGGAGGCTGTCTCCCCGGTaGCTAAGGACTCGACTTTCA +
Preference number: 5 (lower is better)
Translates to: SALAGPFKVVDGHTVTYGRLSPR*LRTRLS
Trigger: TGAAAGTCGAGTCCTTAGCAACCGGGGAGACAGCCT...CCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACTCTTCAGAGCTCTCCTaGGTGTCCTGTGATGCGCTG +
Preference number: 5 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDSSELS*VSCDAL
Trigger: CAGCGCATCACAGGACACCAAGGAGAGCTCTGAAGA...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTTCTTCAGAGCTCTCCTaGGTGTCCTGTGATGCGCTG +
Preference number: 5 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGSSELS*VSCDAL
Trigger: CAGCGCATCACAGGACACCAAGGAGAGCTCTGAAGA...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCGTCCAGCCGTCCCCTTaGTCTTCTTCCATAAGACTG +
Preference number: 5 (lower is better)
Translates to: VSAEATGSEIKCIGPGAPVQPSP*SSSIRL
Trigger: CAGTCTTATGGAAGAAGACAAAGGGGACGGCTGGAC...GGGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS GCA 90 bp GGAGTACTGGAAGCATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTaGTGCTGGGCCCGCCGCCCTTCTTGGAAGTGCATCTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GVLEAFSSCLKPFSS*CWARRPSWKCIFLS
Trigger: GGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATGCTTCCAGTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601303.1
CDS CCA 90 bp CGTGTGTTTACCAAAAGCCTCAGCTCTGGCTGGGAGCCACATCCCTaGCTCAAGAAGAGGAAGTCCGTCCTTGGGGATACTGGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: RVFTKSLSSGWEPHP*LKKRKSVLGDTGKG
Trigger: ACCTTTCCCAGTATCCCCAAGGACGGACTTCCTCTTCTTGAGCCAGGGATGTGGCTCCCAGCCAGAGCTGAGGCTTTTGGTAAACACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS-3UTR CAA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTCACCAGGCTCCGCAGTaGTTTGGCGTAAGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCHQAPQ*FGVSLF
Trigger: GAACAGGCTTACGCCAAACAACTGCGGAGCCTGGTG...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp TGCCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTGGCCCGCCGCCCTTCTaGGAAGTGCATCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: CQPRLILLHFQFQPFNVAGPPPF*EVHLPL
Trigger: GAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCC...AGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCACTCCGAAGGTGGGCTaGCTGCTTGGCCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSTPKVG*LLGLLH
Trigger: GTGGAGAAGGCCAAGCAGCAAGCCCACCTTCGGAGT...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACACGTGGGAGTCGTTCTaGGGATCCACAGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDTWESF*GSTAFA
Trigger: TGCAAATGCTGTGGATCCCAAGAACGACTCCCACGT...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACCGGGCAAAACCTGACTaGTGCAGCTCTATAAGGACG +
Preference number: 5 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDRAKPD*CSSIRT
Trigger: CGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCG...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ACCCTCGGCCATAGAGATAGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCCGGGCAAAACCTGACTaGTGCAGCTCTATAAGGACG +
Preference number: 5 (lower is better)
Translates to: TLGHRDSALAGPFKVVDGRAKPD*CSSIRT
Trigger: CGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCG...GCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACTATCTCTATGGCCGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCTTCTTCCAACTGCTGTaGAAGCCGTTTTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSFFQLL*KPFSLL
Trigger: CAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGAA...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCTCGGTCACCACTGTCTaGTTCTTCTTGCCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSSVTTV*FFLPKG
Trigger: GCCTTTTGGCAAGAAGAACAAGACAGTGGTGACCGA...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313285.12
ENST00000600428.5
CDS GCA 90 bp ACATACACGGACACTGAGGTTCTCAGCCACCAGCTCCCGCTGGCCTaGAAAGTCATTCACCTCCTGGAGAATCTGTACGAAGGACTGTTG +
Preference number: 5 (lower is better)
Translates to: TYTDTEVLSHQLPLA*KVIHLLENLYEGLL
Trigger: CAACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGCTGAGAACCTCAGTGTCCGTGTATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596543.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
ENST00000601303.1
CDS GCA 90 bp TGCAAGGTGGGTAGAGGGCTGAATTTGGGATCAAGGAGTCTAGCCTaGCAGACTCTGCACCCGTCTGAGATATTTCACTCCCTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: CKVGRGLNLGSRSLA*QTLHPSEIFHSLPQ
Trigger: CTGGGGAAGGGAGTGAAATATCTCAGACGGGTGCAGAGTCTGGCAGGCTAGACTCCTTGATCCCAAATTCAGCCCTCTACCCACCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598843.1
CDS GCA 90 bp CTCTGCAAACTCACATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTaGTGCTGGGCCCGCCGCCCTTCTTGGAAGTGCATCTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LCKLTFSSCLKPFSS*CWARRPSWKCIFLS
Trigger: GGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATGTGAGTTTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596078.5
CDS GCA 90 bp GTACTGGAAGCATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCTTGGAAGTGCATCTTCCTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: VLEAFSSCLKPFSSC*WARRPSWKCIFLSC
Trigger: ACAGGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATGCTTCCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601303.1
CDS CCA 90 bp TCAAGACATACACGGACACTGAGGTTCTCAGCCACCAGCTCCCGCTaGCCTGCAAAGTCATTCACCTCCTGGAGAATCTGTACGAAGGAC +
Preference number: 5 (lower is better)
Translates to: SRHTRTLRFSATSSR*PAKSFTSWRICTKD
Trigger: GTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGCTGAGAACCTCAGTGTCCGTGTATGTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596543.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
ENST00000601303.1
CDS CCA 90 bp GGGATGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATaGGGGTGTCCTGGCTCTCTTCTGAGGGAGGCTCTTCAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: GMWVPPRNPHQTPCK*GCPGSLLREALQSC
Trigger: ACAGCTCTGAAGAGCCTCCCTCAGAAGAGAGCCAGGACACCCCCATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595305.5
CDS CCA 90 bp TTCTCAGCCACCAGCTCCCGCTGGCCTGCAAAGTCATTCACCTCCTaGAGAATCTGTACGAAGGACTGTTGCTGGCTGAATCGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: FSATSSRWPAKSFTS*RICTKDCCWLNRSC
Trigger: ACAACTGCGATTCAGCCAGCAACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596673.1
CDS CCA 90 bp CTGGAAGCATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTGCTGCTaGGCCCGCCGCCCTTCTTGGAAGTGCATCTTCCTCTCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LEAFSSCLKPFSSCC*ARRPSWKCIFLSCF
Trigger: GAAACAGGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATGCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601303.1
CDS-3UTR CAA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACCTGTACGAAGGACTGTaGCTGGCTGAATTTGGACTC +
Preference number: 5 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDLYEGL*LAEFGL
Trigger: GAGTCCAAATTCAGCCAGCAACAGTCCTTCGTACAG...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTAGGACTGGGATCTCTTGTGAGTACTaGGTCAGCTCAAGACATACA +
Preference number: 5 (lower is better)
Translates to: GTMVEGTAGPSGVTGRTGISCEY*VSSRHT
Trigger: TGTATGTCTTGAGCTGACCAAGTACTCACAAGAGAT...CCCAGTCCTACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTAAAATAGAAGTGGGCTaGGTCTCGGTTGAAGCGCTG +
Preference number: 5 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAKIEVG*VSVEAL
Trigger: CAGCGCTTCAACCGAGACCAAGCCCACTTCTATTTT...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCAAAATAGAAGTGGGCTaGGTCTCGGTTGAAGCGCTG +
Preference number: 5 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCKIEVG*VSVEAL
Trigger: CAGCGCTTCAACCGAGACCAAGCCCACTTCTATTTT...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTATGCCCTCCAAGCACTaGGCTATTATGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGMPSKH*AIMGTT
Trigger: GGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCAT...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCCCAAAAGGCCAGCGCTaGGTGCGGCTGCGACCCGGG +
Preference number: 5 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSPKGQR*VRLRPG
Trigger: CCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGG...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTTTCTTCCAACTGCTGTaGAAGCCGTTTTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QVSAEATGSEIKCIGPGAFFQLL*KPFSLL
Trigger: CAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGAA...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACTTCAGCCGTTCAATGTaGCTCAGGGTTTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDFSRSM*LRVSAI
Trigger: GATCGCTGAAACCCTGAGCAACATTGAACGGCTGAA...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS GCA 90 bp CAGCTCTATAAGGACGTGGGAGTCGTTCTTGGGATCCACAGCATTTaGAGCCACCTTCATGCCCTCCAAGCACTTGGCTATTATGGGCAC +
Preference number: 5 (lower is better)
Translates to: QLYKDVGVVLGIHSI*SHLHALQALGYYGH
Trigger: GTGCCCATAATAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCAAGAACGACTCCCACGTCCTTATAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 90 bp TGCAAACTCACATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCTTGGAAGTGCATCTTCCTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: CKLTFSSCLKPFSSC*WARRPSWKCIFLSC
Trigger: ACAGGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATGTGAGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596078.5
CDS CCA 90 bp TTCTCAGCCACCAGCTCCCGCTGGCCTGCAAAGTCATTCACCTCCTaGAGAATCTGTACGAAGGACTGTTGCTGGCTGAATTTGGACTCA +
Preference number: 5 (lower is better)
Translates to: FSATSSRWPAKSFTS*RICTKDCCWLNLDS
Trigger: TGAGTCCAAATTCAGCCAGCAACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596543.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
ENST00000601303.1
CDS CCA 90 bp CGCTTACTATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTGCTGCTaGGCCCGCCGCCCTTCTTGGAAGTGCATCTTCCTCTCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RLLFSSCLKPFSSCC*ARRPSWKCIFLSCF
Trigger: GAAACAGGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATAGTAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 90 bp GTGGGCCCAGATCTTCAAAGTGGTAGATGGCCACACAGTGACCTATaGGGGATGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGT +
Preference number: 5 (lower is better)
Translates to: VGPDLQSGRWPHSDL*GMWVPPRNPHQTPC
Trigger: ACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGATCTGGGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596758.5
CDS CCA 90 bp GGACAGAACCGGAGTGAGGGAGCCACCATCCCAAAGACAGCAGGGTaGGAAACCAAGGTTTCAGGGATTATTGGGATGTCATCCAGTAAG +
Preference number: 5 (lower is better)
Translates to: GQNRSEGATIPKTAG*ETKVSGIIGMSSSK
Trigger: CTTACTGGATGACATCCCAATAATCCCTGAAACCTTGGTTTCCCACCCTGCTGTCTTTGGGATGGTGGCTCCCTCACTCCGGTTCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596078.5
CDS-3UTR CAA 90 bp CAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTTGTTGCTGGCTGAATTaGGACTCAGGATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: QVSAEATGSEIKCIGPGACCWLN*DSGSSL
Trigger: CAAGGATGATCCTGAGTCCAAATTCAGCCAGCAACA...AGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCACTCCGAAGGTGGGCTaGCTGCTTGGCCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSTPKVG*LLGLLH
Trigger: GTGGAGAAGGCCAAGCAGCAAGCCCACCTTCGGAGT...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACAGGTGTTGAAGCGCTGCAGTaGAGCCGCATATTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: INGGTMVEGTAGPSGVTGVEALQ*SRIFVF
Trigger: AAAAACGAATATGCGGCTCAACTGCAGCGCTTCAAC...ACCTGTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACGTTGAAGCGCTGCAGTaGAGCCGCATATTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDVEALQ*SRIFVF
Trigger: AAAAACGAATATGCGGCTCAACTGCAGCGCTTCAAC...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCGCGTTCATCCATGTCTaGGAGCTTATCGAATATCTG +
Preference number: 5 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSAFIHV*ELIEYL
Trigger: CAGATATTCGATAAGCTCCAAGACATGGATGAACGC...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCCGCGTTCATCCATGTCTaGGAGCTTATCGAATATCTG +
Preference number: 5 (lower is better)
Translates to: VSAEATGSEIKCIGPGAPAFIHV*ELIEYL
Trigger: CAGATATTCGATAAGCTCCAAGACATGGATGAACGC...GGGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTATGCCCTCCAAGCACTaGGCTATTATGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPMPSKH*AIMGTT
Trigger: GGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCAT...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCATGCCCTCCAAGCACTaGGCTATTATGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVMPSKH*AIMGTT
Trigger: GGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCAT...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCTGGGATCCACAGCATTaGCAGCCACCTTCATGCCCT +
Preference number: 5 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVWDPQH*QPPSCP
Trigger: AGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCA...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp CGAAATCCTCATCAAACTCCGTGTAAATGGGGGTGTCCTGGCTCTCTTCTGAGGTGGGATCCACAGCATTaGCAGCCACCTTCATGCCCT +
Preference number: 5 (lower is better)
Translates to: RNPHQTPCKWGCPGSLLRWDPQH*QPPSCP
Trigger: AGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCA...CCTCAGAAGAGAGCCAGGACACCCCCATTTACACGGAGTTTGATGAGGATTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCAGGCTGTCTCCCCGGTaGCTAAGGACTCGACTTTCA +
Preference number: 5 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSRLSPR*LRTRLS
Trigger: TGAAAGTCGAGTCCTTAGCAACCGGGGAGACAGCCT...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTCCAGCCGTCCCCTTaGTCTTCTTCCATAAGACTG +
Preference number: 5 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGVQPSP*SSSIRL
Trigger: CAGTCTTATGGAAGAAGACAAAGGGGACGGCTGGAC...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCAGTTTATTTAATGCTTaGTGGCCCTTGTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSSLFNA*WPLSAP
Trigger: GGGAGCAGACAAGGGCCACAAAGCATTAAATAAACT...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS TCA 90 bp TCATCTCTTGTGAGTACTTGGTCAGCTCAAGACATACACGGACACTaGGGTTCTCAGCCACCAGCTCCCGCTGGCCTGCAAAGTCATTCA +
Preference number: 5 (lower is better)
Translates to: SSLVSTWSAQDIHGH*GSQPPAPAGLQSHS
Trigger: TGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGCTGAGAACCTCAGTGTCCGTGTATGTCTTGAGCTGACCAAGTACTCACAAGAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
ENST00000601303.1
CDS TCA 90 bp GAATTTGGGATCAAGGAGTCTAGCCTGCCAGACTCTGCACCCGTCTaGGATATTTCACTCCCTTCCCCAGCCATGGTTCTTGACAGCGAA +
Preference number: 5 (lower is better)
Translates to: EFGIKESSLPDSAPV*DISLPSPAMVLDSE
Trigger: TTCGCTGTCAAGAACCATGGCTGGGGAAGGGAGTGAAATATCTCAGACGGGTGCAGAGTCTGGCAGGCTAGACTCCTTGATCCCAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598843.1
CDS GCA 90 bp TCACCAGGCTCCGCAGTTGTTTGGCGTAAGCCTGTTCCACTTCGGTaGGTTCTTTCACGAACTTTACATATCTGTCCAACAGGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SPGSAVVWRKPVPLR*VLSRTLHICPTGPA
Trigger: GGCTGGACCTGTTGGACAGATATGTAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGGCTTACGCCAAACAACTGCGGAGCCTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596078.5
ENST00000596543.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 90 bp TTACGCTTACTATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCTTGGAAGTGCATCTTCCTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: LRLLFSSCLKPFSSC*WARRPSWKCIFLSC
Trigger: ACAGGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATAGTAAGCGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 90 bp CAGGGTCTCACCGCAGTTGTTTGGCGTAAGCCTGTTCCACTTCGGTaGGTTCTTTCACGAACTTTACATATCTGTCCAACAGGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: QGLTAVVWRKPVPLR*VLSRTLHICPTGPA
Trigger: GGCTGGACCTGTTGGACAGATATGTAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGGCTTACGCCAAACAACTGCGGTGAGACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595319.5
CDS CCA 90 bp AAACTCACATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTGCTGCTaGGCCCGCCGCCCTTCTTGGAAGTGCATCTTCCTCTCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: KLTFSSCLKPFSSCC*ARRPSWKCIFLSCF
Trigger: GAAACAGGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATGTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596078.5
CDS-3UTR CAA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCCACCAGGCTCCGCAGTaGTTTGGCGTAAGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSHQAPQ*FGVSLF
Trigger: GAACAGGCTTACGCCAAACAACTGCGGAGCCTGGTG...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGGACTCAGGATCATCCTaGGCAGGTCTCTTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPDSGSS*AGLLGR
Trigger: TCTGCCCAAGAGACCTGCCAAGGATGATCCTGAGTC...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AGTGGTAGATGGCCACACAGTGACCTATGGGGGATGTGGGTTCCTCCTCGAAATCTGTACGAAGGACTGTaGCTGGCTGAATTTGGACTC +
Preference number: 5 (lower is better)
Translates to: SGRWPHSDLWGMWVPPRNLYEGL*LAEFGL
Trigger: GAGTCCAAATTCAGCCAGCAACAGTCCTTCGTACAG...ATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp GGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTGGGGCTCCATCTCTTGTGAGTACTaGGTCAGCTCAAGACATACA +
Preference number: 5 (lower is better)
Translates to: GLSRSHGVRNKVHRSWGSISCEY*VSSRHT
Trigger: TGTATGTCTTGAGCTGACCAAGTACTCACAAGAGAT...GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp TGCCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTTCAGCCTTGGTGGCGTaGATATCCTGGTCTAGCCGT +
Preference number: 5 (lower is better)
Translates to: CQPRLILLHFQFQPFNVASALVA*ISWSSR
Trigger: ACGGCTAGACCAGGATATCAACGCCACCAAGGCTGA...AGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCTTCTCCACATCAGCCTaGGTGGCGTTGATATCCTGG +
Preference number: 5 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSFSTSA*VALISW
Trigger: CCAGGATATCAACGCCACCAAGGCTGATGTGGAGAA...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGAGGTGGGCTTGCTGCTaGGCCTTCTCCACATCAGCC +
Preference number: 5 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGRWACC*AFSTSA
Trigger: GGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACCT...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGACTCCGAAGGTGGGCTaGCTGCTTGGCCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGTPKVG*LLGLLH
Trigger: GTGGAGAAGGCCAAGCAGCAAGCCCACCTTCGGAGT...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTAAAATAGAAGTGGGCTaGGTCTCGGTTGAAGCGCTG +
Preference number: 5 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGKIEVG*VSVEAL
Trigger: CAGCGCTTCAACCGAGACCAAGCCCACTTCTATTTT...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GGGCAGCAGGTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCGCGTTCATCCATGTCTaGGAGCTTATCGAATATCTG +
Preference number: 5 (lower is better)
Translates to: GQQVTQVSAEATGSEIKCAFIHV*ELIEYL
Trigger: CAGATATTCGATAAGCTCCAAGACATGGATGAACGC...GCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAACCTGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ACCCTCGGCCATAGAGATAGTGCCCTCGCTGGACCCTTCAAAGTGGTAGATGGCGCGTTCATCCATGTCTaGGAGCTTATCGAATATCTG +
Preference number: 5 (lower is better)
Translates to: TLGHRDSALAGPFKVVDGAFIHV*ELIEYL
Trigger: CAGATATTCGATAAGCTCCAAGACATGGATGAACGC...GCCATCTACCACTTTGAAGGGTCCAGCGAGGGCACTATCTCTATGGCCGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCACGTGGGAGTCGTTCTaGGGATCCACAGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSTWESF*GSTAFA
Trigger: TGCAAATGCTGTGGATCCCAAGAACGACTCCCACGT...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGGCAAAACCTGACTaGTGCAGCTCTATAAGGACG +
Preference number: 5 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVRAKPD*CSSIRT
Trigger: CGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCG...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGCGAGGCTTGTTCTTCTaGCCAAAAGGCCAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPRGLFF*PKGQRL
Trigger: CAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTCG...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS-3UTR CAA 90 bp AGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTACTGTCTTGTTCTTCTaGCCAAAAGGCCAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: SMYINGGTMVEGTAGPSGTVLFF*PKGQRL
Trigger: CAAGCGCTGGCCTTTTGGCAAGAAGAACAAGACAGT...ACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
CDS TCA 90 bp GGTCTGAGAACTGGGAGCACTCACATCGAATATCTGGGGCATCTGTaGAAAATAGAAGTGGGCTTGGTCTCGGTTGAAGCGCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GLRTGSTHIEYLGHL*KIEVGLVSVEALQL
Trigger: CAACTGCAGCGCTTCAACCGAGACCAAGCCCACTTCTATTTTTCACAGATGCCCCAGATATTCGATGTGAGTGCTCCCAGTTCTCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596078.5
CDS GCA 90 bp AATTTACGCTTACTATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTaGTGCTGGGCCCGCCGCCCTTCTTGGAAGTGCATCTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: NLRLLFSSCLKPFSS*CWARRPSWKCIFLS
Trigger: GGAGAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATAGTAAGCGTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 90 bp GATCTTCAAAGTGGTAGATGGCCACACAGTGACCTATGGGGGATGTaGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATGGGGG +
Preference number: 5 (lower is better)
Translates to: DLQSGRWPHSDLWGM*VPPRNPHQTPCKWG
Trigger: CCCCCATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596758.5
CDS-3UTR CAA 90 bp TATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTTGTTGCTGGCTGAATTaGGACTCAGGATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: YVHQWWNDGRRHSGSVRCCCWLN*DSGSSL
Trigger: CAAGGATGATCCTGAGTCCAAATTCAGCCAGCAACA...ACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTCTGTACGAAGGACTGTaGCTGGCTGAATTTGGACTC +
Preference number: 5 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPLYEGL*LAEFGL
Trigger: GAGTCCAAATTCAGCCAGCAACAGTCCTTCGTACAG...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCGGTGTGACATCTCTTGTGAGTACTaGGTCAGCTCAAGACATACA +
Preference number: 5 (lower is better)
Translates to: VHQWWNDGRRHSGSVRCDISCEY*VSSRHT
Trigger: TGTATGTCTTGAGCTGACCAAGTACTCACAAGAGAT...GTCACACCGGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTTCTCCACATCAGCCTaGGTGGCGTTGATATCCTGG +
Preference number: 5 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPFSTSA*VALISW
Trigger: CCAGGATATCAACGCCACCAAGGCTGATGTGGAGAA...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCAAAATAGAAGTGGGCTaGGTCTCGGTTGAAGCGCTG +
Preference number: 5 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSKIEVG*VSVEAL
Trigger: CAGCGCTTCAACCGAGACCAAGCCCACTTCTATTTT...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGACGTGGGAGTCGTTCTaGGGATCCACAGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPTWESF*GSTAFA
Trigger: TGCAAATGCTGTGGATCCCAAGAACGACTCCCACGT...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGCGGGCAAAACCTGACTaGTGCAGCTCTATAAGGACG +
Preference number: 5 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPRAKPD*CSSIRT
Trigger: CGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCG...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCCTTCTTCCAACTGCTGTaGAAGCCGTTTTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MSMYINGGTMVEGTAGPSFFQLL*KPFSLL
Trigger: CAGCAGCGAAAACGGCTTCAACAGCAGTTGGAAGAA...GGACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTTACACAGGTCTCAGCCGAAGCCACGGGGTCAGAAATAAAGTGCATAGGTCCTTTCAGCCGTTCAATGTaGCTCAGGGTTTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: VTQVSAEATGSEIKCIGPFSRSM*LRVSAI
Trigger: GATCGCTGAAACCCTGAGCAACATTGAACGGCTGAA...AGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGAGACCTGTGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCAGGCTGTCTCCCCGGTaGCTAAGGACTCGACTTTCA +
Preference number: 5 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSRLSPR*LRTRLS
Trigger: TGAAAGTCGAGTCCTTAGCAACCGGGGAGACAGCCT...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGGTCCAGCCGTCCCCTTaGTCTTCTTCCATAAGACTG +
Preference number: 5 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPVQPSP*SSSIRL
Trigger: CAGTCTTATGGAAGAAGACAAAGGGGACGGCTGGAC...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTTCAGCCGTTCAATGTaGCTCAGGGTTTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: NMSMYINGGTMVEGTAGPFSRSM*LRVSAI
Trigger: GATCGCTGAAACCCTGAGCAACATTGAACGGCTGAA...CGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS TCA 90 bp GCGTTCATCCATGTCTTGGAGCTTATCGAATATCTGGGGCATCTGTaGAAAATAGAAGTGGGCTTGGTCTCGGTTGAAGCGCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: AFIHVLELIEYLGHL*KIEVGLVSVEALQL
Trigger: CAACTGCAGCGCTTCAACCGAGACCAAGCCCACTTCTATTTTTCACAGATGCCCCAGATATTCGATAAGCTCCAAGACATGGATGAACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCCTGTACGAAGGACTGTaGCTGGCTGAATTTGGACTC +
Preference number: 5 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSLYEGL*LAEFGL
Trigger: GAGTCCAAATTCAGCCAGCAACAGTCCTTCGTACAG...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp TGCCAGCCACGCCTCATACTTCTGCACTTCCAATTTCAGCCGTTCAATGTTGCTGTTGAAGCGCTGCAGTaGAGCCGCATATTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: CQPRLILLHFQFQPFNVAVEALQ*SRIFVF
Trigger: AAAAACGAATATGCGGCTCAACTGCAGCGCTTCAAC...AGCAACATTGAACGGCTGAAATTGGAAGTGCAGAAGTATGAGGCGTGGCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp CATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCGTCGCGTTCATCCATGTCTaGGAGCTTATCGAATATCTG +
Preference number: 5 (lower is better)
Translates to: HEYVHQWWNDGRRHSGSVAFIHV*ELIEYL
Trigger: CAGATATTCGATAAGCTCCAAGACATGGATGAACGC...GACGGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp ACCTATGGGGGATGTGGGTTCCTCCTCGAAATCCTCATCAAACTCCGTGTAAATTTCAGCCGTTCAATGTaGCTCAGGGTTTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: TYGGCGFLLEILIKLRVNFSRSM*LRVSAI
Trigger: GATCGCTGAAACCCTGAGCAACATTGAACGGCTGAA...ATTTACACGGAGTTTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGAGAGGAAGTCCGTCCTaGGGGATACTGGGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGRGSPS*GILGKV
Trigger: TACCTTTCCCAGTATCCCCAAGGACGGACTTCCTCT...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS-3UTR CAA 90 bp AAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGTCCTGTTGCTGGCTGAATTaGGACTCAGGATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: KHEYVHQWWNDGRRHSGSCCWLN*DSGSSL
Trigger: CAAGGATGATCCTGAGTCCAAATTCAGCCAGCAACA...GGACCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGGCTGTACGAAGGACTGTaGCTGGCTGAATTTGGACTC +
Preference number: 5 (lower is better)
Translates to: VKHEYVHQWWNDGRRHSGLYEGL*LAEFGL
Trigger: GAGTCCAAATTCAGCCAGCAACAGTCCTTCGTACAG...CCCGCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGGTGGGCTTGCTGCTaGGCCTTCTCCACATCAGCC +
Preference number: 5 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHRWACC*AFSTSA
Trigger: GGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACCT...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGGCTGCCTCGAAGGCTaGTTCTTCTTGCCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSGCLEG*FFLPKG
Trigger: GCCTTTTGGCAAGAAGAACAAGCCTTCGAGGCAGCC...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS-3UTR CAA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCTTCTCCACATCAGCCTaGGTGGCGTTGATATCCTGG +
Preference number: 5 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSFSTSA*VALISW
Trigger: CCAGGATATCAACGCCACCAAGGCTGATGTGGAGAA...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGATCCTGTGATGCGCTGTaGCTGCTGCTGTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRSCDAL*LLLSGG
Trigger: CCCGCCAGACAGCAGCAGCAACAGCGCATCACAGGA...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACATGCCCTCCAAGCACTaGGCTATTATGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHMPSKH*AIMGTT
Trigger: GGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCAT...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACAGCGTTGAAGCGCTGCAGTaGAGCCGCATATTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: DVKHEYVHQWWNDGRRHSVEALQ*SRIFVF
Trigger: AAAAACGAATATGCGGCTCAACTGCAGCGCTTCAAC...GCTGTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACGATGCTAGCCTCGGTTaGACCGACTTACTGATCTCG +
Preference number: 5 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHDASLG*TDLLIS
Trigger: CGAGATCAGTAAGTCGGTCAAACCGAGGCTAGCATC...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS-3UTR CAA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGATGGGATCCACAGCATTaGCAGCCACCTTCATGCCCT +
Preference number: 5 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRWDPQH*QPPSCP
Trigger: AGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCA...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACTTCAGCCGTTCAATGTaGCTCAGGGTTTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHFSRSM*LRVSAI
Trigger: GATCGCTGAAACCCTGAGCAACATTGAACGGCTGAA...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGATCTTCAGAGCTCTCCTaGGTGTCCTGTGATGCGCTG +
Preference number: 5 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRSSELS*VSCDAL
Trigger: CAGCGCATCACAGGACACCAAGGAGAGCTCTGAAGA...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACACTGTCTTGTTCTTCTaGCCAAAAGGCCAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHTVLFF*PKGQRL
Trigger: CAAGCGCTGGCCTTTTGGCAAGAAGAACAAGACAGT...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
CDS-3UTR CAA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACTGTTGCTGGCTGAATTaGGACTCAGGATCATCCTTG +
Preference number: 5 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHCCWLN*DSGSSL
Trigger: CAAGGATGATCCTGAGTCCAAATTCAGCCAGCAACA...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAACGTGGGAGTCGTTCTaGGGATCCACAGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRTWESF*GSTAFA
Trigger: TGCAAATGCTGTGGATCCCAAGAACGACTCCCACGT...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp AAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAAGGCACATCTCTTGTGAGTACTaGGTCAGCTCAAGACATACA +
Preference number: 5 (lower is better)
Translates to: KDVKHEYVHQWWNDGRRHISCEY*VSSRHT
Trigger: TGTATGTCTTGAGCTGACCAAGTACTCACAAGAGAT...GTGCCTTCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS-3UTR CAA 90 bp GAAAGAAAAGATGTAAAACATGAGTATGTACATCAATGGTGGAACGATGGTAGAGTTGAAGCGCTGCAGTaGAGCCGCATATTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: ERKDVKHEYVHQWWNDGRVEALQ*SRIFVF
Trigger: AAAAACGAATATGCGGCTCAACTGCAGCGCTTCAAC...TCTACCATCGTTCCACCATTGATGTACATACTCATGTTTTACATCTTTTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000596758.5
ENST00000600428.5
ENST00000600677.5
CDS GCA 72 bp CCGGGCCTCGGAGTTCAGGCCGTCCATCCGAGGGGGTaGCCAGACTGCTGTCGGAGGGTGCACGGTTCATGG +
Preference number: 6 (lower is better)
Translates to: PGLGVQAVHPRG*PDCCRRVHGSW
Trigger: CCATGAACCGTGCACCCTCCGACAGCAGTCTGGGCACCCCCTCGGATGGACGGCCTGAACTCCGAGGCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CAA 90 bp AGGGTCCCGGCCCCCACCTTGTTCTTCTTGCCAAAAGGCCAGCGCTaGGTGCGGCTGCGACCCGGGCCTCGGAGTTCAGGCCGTCCATCC +
Preference number: 6 (lower is better)
Translates to: RVPAPTLFFLPKGQR*VRLRPGPRSSGRPS
Trigger: GGATGGACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGGTGGGGGCCGGGACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600491.5
CDS GCA 72 bp CCTCCAGTCCGGGCTGGCAGCCAAGAGGAAAATTCCTaGCCGAGACTCGGCGTTCAGGCGGCTGGGGCTGAC +
Preference number: 6 (lower is better)
Translates to: PPVRAGSQEENS*PRLGVQAAGAD
Trigger: GTCAGCCCCAGCCGCCTGAACGCCGAGTCTCGGGCAGGAATTTTCCTCTTGGCTGCCAGCCCGGACTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600491.5
CDS CCA 72 bp CCCAGACTGCTGTCGGAGGGTGCACGGTTCATGGGCTaGCTGAAGTCCTCGAATTCCACGTCGCCCGGGCGG +
Preference number: 6 (lower is better)
Translates to: PRLLSEGARFMG*LKSSNSTSPGR
Trigger: CCGCCCGGGCGACGTGGAATTCGAGGACTTCAGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGTCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 72 bp GGCGAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTaGTGCGGCTGCGACCCGGGCCTCGGAGTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: GEACSSCQKASA*CGCDPGLGVQA
Trigger: GGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS CCA 72 bp CCCCCACCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTaGTGCGGCTGCGACCCGGGCCTCGGAGTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: PPPCSSCQKASA*CGCDPGLGVQA
Trigger: GGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600491.5
CDS CAA 72 bp GGGCGAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTaGGTGCGGCTGCGACCCGGGCCTCGGAGTTCAGGC +
Preference number: 6 (lower is better)
Translates to: GRGLFFLPKGQR*VRLRPGPRSSG
Trigger: GCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS CAA 72 bp CAGAGTCTCCGCTGGGAAACTGAAGACAGGCCGTCCTaGGGGCGCCAGGCCCAGGCCTTTCCCCAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: QSLRWETEDRPS*GRQAQAFPQLP
Trigger: AGGCAGCTGGGGAAAGGCCTGGGCCTGGCGCCCCAAGGACGGCCTGTCTTCAGTTTCCCAGCGGAGACTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596543.5
CDS CAA 90 bp CACGGCTGCCTCGAAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTaGGTGCGGCTGCGACCCGGGCCTCGGAGTTCAGGCCGTCCATCC +
Preference number: 6 (lower is better)
Translates to: HGCLEGLFFLPKGQR*VRLRPGPRSSGRPS
Trigger: GGATGGACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTTCGAGGCAGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS TCA 72 bp GACTGCTGTCGGAGGGTGCACGGTTCATGGGCTGGCTaGAGTCCTCGAATTCCACGTCGCCCGGGCGGGCAA +
Preference number: 6 (lower is better)
Translates to: DCCRRVHGSWAG*SPRIPRRPGGQ
Trigger: TTGCCCGCCCGGGCGACGTGGAATTCGAGGACTTCAGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 72 bp TGTTCTTCTTGCCAAAAGGCCAGCGCTTGGTGCGGCTaGGACCCGGGCCTCGGAGTTCAGGCCGTCCATCCG +
Preference number: 6 (lower is better)
Translates to: CSSCQKASAWCG*DPGLGVQAVHP
Trigger: CGGATGGACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 72 bp GAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTGGTaGGGCTGCGACCCGGGCCTCGGAGTTCAGGCCGTC +
Preference number: 6 (lower is better)
Translates to: EACSSCQKASAW*GCDPGLGVQAV
Trigger: GACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS GCA 72 bp AGAGGGCCCACGGCTGCCTCGAAGGCTTGTTCTTCTTaGCAAAAGGCCAGCGCTTGGTGCGGCTGCGACCCG +
Preference number: 6 (lower is better)
Translates to: RGPTAASKACSS*QKASAWCGCDP
Trigger: CGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTTCGAGGCAGCCGTGGGCCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS GCA 72 bp CCACCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTGGTaGGGCTGCGACCCGGGCCTCGGAGTTCAGGCCGTC +
Preference number: 6 (lower is better)
Translates to: PPCSSCQKASAW*GCDPGLGVQAV
Trigger: GACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600491.5
CDS TCA 72 bp CCACTAATGGTCTGGTCCCTCCGGCCACAGGGCGGATaGGAGGGTTTCGATCCAACCCAGGACGCGCCTTCG +
Preference number: 6 (lower is better)
Translates to: PLMVWSLRPQGG*EGFDPTQDAPS
Trigger: CGAAGGCGCGTCCTGGGTTGGATCGAAACCCTCTCATCCGCCCTGTGGCCGGAGGGACCAGACCATTAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596543.5
CDS GCA 72 bp AAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTGGTaGGGCTGCGACCCGGGCCTCGGAGTTCAGGCCGTC +
Preference number: 6 (lower is better)
Translates to: KACSSCQKASAW*GCDPGLGVQAV
Trigger: GACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS GCA 72 bp GCCAAGGCCAGGTCCATTAACTCCCGCACCGCATCCTaGCTTCCCTCCCCCAGAGTCTCCGCTGGGAAACTG +
Preference number: 6 (lower is better)
Translates to: AKARSINSRTAS*LPSPRVSAGKL
Trigger: CAGTTTCCCAGCGGAGACTCTGGGGGAGGGAAGGCAGGATGCGGTGCGGGAGTTAATGGACCTGGCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596543.5
CDS CCA 72 bp CCTCCGACAGGAGCCCATACCCGGCACCCAGGCGGGTaGCCCTGCGTTCATCCATGTCTTGGAGCTTATCGA +
Preference number: 6 (lower is better)
Translates to: PPTGAHTRHPGG*PCVHPCLGAYR
Trigger: TCGATAAGCTCCAAGACATGGATGAACGCAGGGCCACCCGCCTGGGTGCCGGGTATGGGCTCCTGTCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 72 bp TCGAAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTTaGTGCGGCTGCGACCCGGGCCTCGGAGTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: SKACSSCQKASA*CGCDPGLGVQA
Trigger: GGCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS CAA 72 bp CTCGAAGGCTTGTTCTTCTTGCCAAAAGGCCAGCGCTaGGTGCGGCTGCGACCCGGGCCTCGGAGTTCAGGC +
Preference number: 6 (lower is better)
Translates to: LEGLFFLPKGQR*VRLRPGPRSSG
Trigger: GCCTGAACTCCGAGGCCCGGGTCGCAGCCGCACCAAGCGCTGGCCTTTTGGCAAGAAGAACAAGCCTTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS GCA 72 bp TCCATCCGAGGGGGTGCCCAGACTGCTGTCGGAGGGTaGACGGTTCATGGGCTGGCTGAAGTCCTCGAATTC +
Preference number: 6 (lower is better)
Translates to: SIRGGAQTAVGG*TVHGLAEVLEF
Trigger: GAATTCGAGGACTTCAGCCAGCCCATGAACCGTGCACCCTCCGACAGCAGTCTGGGCACCCCCTCGGATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 72 bp GGGGGCAAGTGGCTAAAATCCTCGGTCACCACTGTCTaGAAGGTGGGTAGAGGGCCCACGGCTGCCTCGAAG +
Preference number: 6 (lower is better)
Translates to: GGKWLKSSVTTV*KVGRGPTAASK
Trigger: CTTCGAGGCAGCCGTGGGCCCTCTACCCACCTTGCAGACAGTGGTGACCGAGGATTTTAGCCACTTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600677.5
CDS CCA 72 bp CAGCCACCTTCATGCCCTCCAAGCACTTGGCTATTATaGGCACCACCTCCAGCTCGGCCTCCGACAGGAGCC +
Preference number: 6 (lower is better)
Translates to: QPPSCPPSTWLL*APPPARPPTGA
Trigger: GGCTCCTGTCGGAGGCCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CAA 90 bp GTCCCACGGCTGCCTCGAAGGCTGCGGAAGGATGCTAGCCTCGGTTaGACCGACTTACTGATCTCGCTCAGTATGGCCAAGGGGTCACGG +
Preference number: 6 (lower is better)
Translates to: VPRLPRRLRKDASLG*TDLLISLSMAKGSR
Trigger: CCGTGACCCCTTGGCCATACTGAGCGAGATCAGTAAGTCGGTCAAACCGAGGCTAGCATCCTTCCGCAGCCTTCGAGGCAGCCGTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS CAA 90 bp CCCAGGCGCGTCCTCCGTAGCGTCCACCCCAGGGTCTCACCGCAGTaGTTTGGCGTAAGCCTGTTCCACTTCGGTGCGTTCTTTCACGAA +
Preference number: 6 (lower is better)
Translates to: PRRVLRSVHPRVSPQ*FGVSLFHFGAFFHE
Trigger: TTCGTGAAAGAACGCACCGAAGTGGAACAGGCTTACGCCAAACAACTGCGGTGAGACCCTGGGGTGGACGCTACGGAGGACGCGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595319.5
CDS TCA 72 bp GTACTGGAAGCCTATGGGGGAGGGAAGGTCCAGGTCTaGCAAAGAGGGCAGCTCCCTGACTCCGGATCCGCA +
Preference number: 6 (lower is better)
Translates to: VLEAYGGGKVQV*QRGQLPDSGSA
Trigger: TGCGGATCCGGAGTCAGGGAGCTGCCCTCTTTGTCAGACCTGGACCTTCCCTCCCCCATAGGCTTCCAGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596078.5
CDS CAA 72 bp GTCCTCCGTAGCGTCCACCCCAGGGTCTCACCGCAGTaGTTTGGCGTAAGCCTGTTCCACTTCGGTGCGTTC +
Preference number: 6 (lower is better)
Translates to: VLRSVHPRVSPQ*FGVSLFHFGAF
Trigger: GAACGCACCGAAGTGGAACAGGCTTACGCCAAACAACTGCGGTGAGACCCTGGGGTGGACGCTACGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595319.5
CDS CCA 72 bp CAGCATTTGCAGCCACCTTCATGCCCTCCAAGCACTTaGCTATTATGGGCACCACCTCCAGCTCGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: QHLQPPSCPPST*LLWAPPPARPP
Trigger: CGGAGGCCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAAATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CAA 90 bp TTGGGATCCACAGCATTTGCAGCCACCTTCATGCCCTCCAAGCACTaGGCTATTATGGGCACCACCTCCAGCTCGGCCTCCGACAGGAGC +
Preference number: 6 (lower is better)
Translates to: LGSTAFAATFMPSKH*AIMGTTSSSASDRS
Trigger: GCTCCTGTCGGAGGCCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CAA 90 bp AGGTGGGCTTGCTGCTTGGCCTTCTCCACATCAGCCTTGGTGGCGTaGATATCCTGGTCTAGCCGTTCAGCAGTCTGGGCTGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: RWACCLAFSTSALVA*ISWSSRSAVWAAFS
Trigger: AGAGAAGGCAGCCCAGACTGCTGAACGGCTAGACCAGGATATCAACGCCACCAAGGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CAA 90 bp TGGGGGTGTCCTGGCTCTCTTCTGAGGGAGGCTCTTCAGAGCTGTTaGGGGATAATTCGGCAGATAAAGACAGGCCCTCCTGGGACCCTG +
Preference number: 6 (lower is better)
Translates to: WGCPGSLLREALQSC*GIIRQIKTGPPGTL
Trigger: CAGGGTCCCAGGAGGGCCTGTCTTTATCTGCCGAATTATCCCCAAACAGCTCTGAAGAGCCTCCCTCAGAAGAGAGCCAGGACACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595305.5
CDS TCA 72 bp GCTGCTTGGCCTTCTCCACATCAGCCTTGGTGGCGTTaGTATCCTGGTCTAGCCGTTCAGCAGTCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: AAWPSPHQPWWR*YPGLAVQQSGL
Trigger: CAGCCCAGACTGCTGAACGGCTAGACCAGGATATCAACGCCACCAAGGCTGATGTGGAGAAGGCCAAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS TCA 72 bp GTCCTCGAATTCCACGTCGCCCGGGCGGGCAAAACCTaGCTTGTGCAGCTCTATAAGGACGTGGGAGTCGTT +
Preference number: 6 (lower is better)
Translates to: VLEFHVARAGKT*LVQLYKDVGVV
Trigger: AACGACTCCCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCGCCCGGGCGACGTGGAATTCGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 72 bp ACAGGAGCCCATACCCGGCACCCAGGCGGGTGGCCCTaGGTTCATCCATGTCTTGGAGCTTATCGAATATCT +
Preference number: 6 (lower is better)
Translates to: TGAHTRHPGGWP*VHPCLGAYRIS
Trigger: AGATATTCGATAAGCTCCAAGACATGGATGAACGCAGGGCCACCCGCCTGGGTGCCGGGTATGGGCTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CAA 72 bp ACAGCATTTGCAGCCACCTTCATGCCCTCCAAGCACTaGGCTATTATGGGCACCACCTCCAGCTCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: TAFAATFMPSKH*AIMGTTSSSAS
Trigger: GGAGGCCGAGCTGGAGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAAATGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CAA 90 bp CTGAAGTCCTCGAATTCCACGTCGCCCGGGCGGGCAAAACCTGACTaGTGCAGCTCTATAAGGACGTGGGAGTCGTTCTTGGGATCCACA +
Preference number: 6 (lower is better)
Translates to: LKSSNSTSPGRAKPD*CSSIRTWESFLGST
Trigger: TGTGGATCCCAAGAACGACTCCCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCGCCCGGGCGACGTGGAATTCGAGGACTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 72 bp AATTCCACGTCGCCCGGGCGGGCAAAACCTGACTTGTaGAGCTCTATAAGGACGTGGGAGTCGTTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: NSTSPGRAKPDL*SSIRTWESFLG
Trigger: TCCCAAGAACGACTCCCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCGCCCGGGCGACGTGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 72 bp ACACGGACACTGAGGTTCTCAGCCACCAGCTCCCGCTaGCCTGCAAAGTCATTCACCTCCTGGAGAATCTGT +
Preference number: 6 (lower is better)
Translates to: TRTLRFSATSSR*PAKSFTSWRIC
Trigger: ACAGATTCTCCAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGCTGAGAACCTCAGTGTCCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596543.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
ENST00000601303.1
CDS CCA 72 bp GCCTTCTCCACATCAGCCTTGGTGGCGTTGATATCCTaGTCTAGCCGTTCAGCAGTCTGGGCTGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: AFSTSALVALIS*SSRSAVWAAFS
Trigger: AGAGAAGGCAGCCCAGACTGCTGAACGGCTAGACCAGGATATCAACGCCACCAAGGCTGATGTGGAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CCA 72 bp TTTGGGGATAATTCGGCAGATAAAGACAGGCCCTCCTaGGACCCTGGGAACAGACCCACTCTGACGTCACCC +
Preference number: 6 (lower is better)
Translates to: FGDNSADKDRPS*DPGNRPTLTSP
Trigger: GGGTGACGTCAGAGTGGGTCTGTTCCCAGGGTCCCAGGAGGGCCTGTCTTTATCTGCCGAATTATCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595305.5
CDS CCA 72 bp ACCAAAAGCCTCAGCTCTGGCTGGGAGCCACATCCCTaGCTCAAGAAGAGGAAGTCCGTCCTTGGGGATACT +
Preference number: 6 (lower is better)
Translates to: TKSLSSGWEPHP*LKKRKSVLGDT
Trigger: AGTATCCCCAAGGACGGACTTCCTCTTCTTGAGCCAGGGATGTGGCTCCCAGCCAGAGCTGAGGCTTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS CAA 72 bp TGCTGCTTGGCCTTCTCCACATCAGCCTTGGTGGCGTaGATATCCTGGTCTAGCCGTTCAGCAGTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: CCLAFSTSALVA*ISWSSRSAVWA
Trigger: AGCCCAGACTGCTGAACGGCTAGACCAGGATATCAACGCCACCAAGGCTGATGTGGAGAAGGCCAAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CAA 72 bp AGGTGGGCTTGCTGCTTGGCCTTCTCCACATCAGCCTaGGTGGCGTTGATATCCTGGTCTAGCCGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: RWACCLAFSTSA*VALISWSSRSA
Trigger: TGCTGAACGGCTAGACCAGGATATCAACGCCACCAAGGCTGATGTGGAGAAGGCCAAGCAGCAAGCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CAA 72 bp TCGAATTCCACGTCGCCCGGGCGGGCAAAACCTGACTaGTGCAGCTCTATAAGGACGTGGGAGTCGTTCTTG +
Preference number: 6 (lower is better)
Translates to: SNSTSPGRAKPD*CSSIRTWESFL
Trigger: CAAGAACGACTCCCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCCCGCCCGGGCGACGTGGAATTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS CAA 72 bp CTGCCTCGAAGGCTGCGGAAGGATGCTAGCCTCGGTTaGACCGACTTACTGATCTCGCTCAGTATGGCCAAG +
Preference number: 6 (lower is better)
Translates to: LPRRLRKDASLG*TDLLISLSMAK
Trigger: CTTGGCCATACTGAGCGAGATCAGTAAGTCGGTCAAACCGAGGCTAGCATCCTTCCGCAGCCTTCGAGGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313244.14
CDS CAA 90 bp AAATCCTCGGTCACCACTGTCTGCAAGGTGGGTAGAGGGCTGAATTaGGGATCAAGGAGTCTAGCCTGCCAGACTCTGCACCCGTCTGAG +
Preference number: 6 (lower is better)
Translates to: KSSVTTVCKVGRGLN*GSRSLACQTLHPSE
Trigger: CTCAGACGGGTGCAGAGTCTGGCAGGCTAGACTCCTTGATCCCAAATTCAGCCCTCTACCCACCTTGCAGACAGTGGTGACCGAGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598843.1
CDS GCA 72 bp GACACTGAGGTTCTCAGCCACCAGCTCCCGCTGGCCTaGAAAGTCATTCACCTCCTGGAGAATCTGTACGAA +
Preference number: 6 (lower is better)
Translates to: DTEVLSHQLPLA*KVIHLLENLYE
Trigger: TTCGTACAGATTCTCCAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGCTGAGAACCTCAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596543.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
ENST00000601303.1
CDS GCA 72 bp GCATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCTTGGAAGTGCATCTTC +
Preference number: 6 (lower is better)
Translates to: AFSSCLKPFSSC*WARRPSWKCIF
Trigger: GAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601303.1
CDS CCA 72 bp TTCTCCAGCTGTTTAAAGCCATTTTCCAGCTGCTGCTaGGCCCGCCGCCCTTCTTGGAAGTGCATCTTCCTC +
Preference number: 6 (lower is better)
Translates to: FSSCLKPFSSCC*ARRPSWKCIFL
Trigger: GAGGAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
ENST00000601303.1
CDS CAA 72 bp GTCACCACTGTCTGCAAGGTGGGTAGAGGGCTGAATTaGGGATCAAGGAGTCTAGCCTGCCAGACTCTGCAC +
Preference number: 6 (lower is better)
Translates to: VTTVCKVGRGLN*GSRSLACQTLH
Trigger: GTGCAGAGTCTGGCAGGCTAGACTCCTTGATCCCAAATTCAGCCCTCTACCCACCTTGCAGACAGTGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598843.1
CDS GCA 72 bp CTATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCTTGGAAGTGCATCTTC +
Preference number: 6 (lower is better)
Translates to: LFSSCLKPFSSC*WARRPSWKCIF
Trigger: GAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 72 bp CGTTCTTGGGATCCACAGCATTTGCAGCCACCTTCATaGCCTCCAAGCACTTGGCTATTATGGGCACCACCT +
Preference number: 6 (lower is better)
Translates to: RSWDPQHLQPPS*PPSTWLLWAPP
Trigger: AGGTGGTGCCCATAATAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCAAGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 72 bp AAGGACGTGGGAGTCGTTCTTGGGATCCACAGCATTTaGAGCCACCTTCATGCCCTCCAAGCACTTGGCTAT +
Preference number: 6 (lower is better)
Translates to: KDVGVVLGIHSI*SHLHALQALGY
Trigger: ATAGCCAAGTGCTTGGAGGGCATGAAGGTGGCTGCAAATGCTGTGGATCCCAAGAACGACTCCCACGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 72 bp ACATTCTCCAGCTGTTTAAAGCCATTTTCCAGCTGCTaGTGGGCCCGCCGCCCTTCTTGGAAGTGCATCTTC +
Preference number: 6 (lower is better)
Translates to: TFSSCLKPFSSC*WARRPSWKCIF
Trigger: GAAGATGCACTTCCAAGAAGGGCGGCGGGCCCAGCAGCAGCTGGAAAATGGCTTTAAACAGCTGGAGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596078.5
CDS GCA 72 bp GCCCCCATGCCTCCGGGCCACAGTCACTGCTACCTCTaGAAACTCACATTCTCCAGCTGTTTAAAGCCATTT +
Preference number: 6 (lower is better)
Translates to: APMPPGHSHCYL*KLTFSSCLKPF
Trigger: AAATGGCTTTAAACAGCTGGAGAATGTGAGTTTGCAGAGGTAGCAGTGACTGTGGCCCGGAGGCATGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596078.5
CDS CCA 72 bp ACCAGCTCCCGCTGGCCTGCAAAGTCATTCACCTCCTaGAGAATCTGTACGAAGGACTGTTGCTGGCTGAAT +
Preference number: 6 (lower is better)
Translates to: TSSRWPAKSFTS*RICTKDCCWLN
Trigger: ATTCAGCCAGCAACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596543.5
ENST00000596673.1
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
ENST00000601303.1
CDS TCA 72 bp ATCAAGGAGTCTAGCCTGCCAGACTCTGCACCCGTCTaGGATATTTCACTCCCTTCCCCAGCCATGGTTCTT +
Preference number: 6 (lower is better)
Translates to: IKESSLPDSAPV*DISLPSPAMVL
Trigger: AAGAACCATGGCTGGGGAAGGGAGTGAAATATCTCAGACGGGTGCAGAGTCTGGCAGGCTAGACTCCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598843.1
CDS GCA 72 bp GGTAGAGGGCTGAATTTGGGATCAAGGAGTCTAGCCTaGCAGACTCTGCACCCGTCTGAGATATTTCACTCC +
Preference number: 6 (lower is better)
Translates to: GRGLNLGSRSLA*QTLHPSEIFHS
Trigger: GGAGTGAAATATCTCAGACGGGTGCAGAGTCTGGCAGGCTAGACTCCTTGATCCCAAATTCAGCCCTCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598843.1
CDS CAA 90 bp CCATCCCAAAGACAGCAGGGTGGGAAACCAAGGTTTCAGGGATTATaGGGATGTCATCCAGTAAGTAGGGGTCAAGGGAGTACTGGAAGC +
Preference number: 6 (lower is better)
Translates to: PSQRQQGGKPRFQGL*GCHPVSRGQGSTGS
Trigger: GCTTCCAGTACTCCCTTGACCCCTACTTACTGGATGACATCCCAATAATCCCTGAAACCTTGGTTTCCCACCCTGCTGTCTTTGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596078.5
CDS CAA 72 bp GTCATTCACCTCCTGGAGAATCTGTACGAAGGACTGTaGCTGGCTGAATCGCAGTTGTTTGGCGTAAGCCTG +
Preference number: 6 (lower is better)
Translates to: VIHLLENLYEGL*LAESQLFGVSL
Trigger: CAGGCTTACGCCAAACAACTGCGATTCAGCCAGCAACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596673.1
CDS CCA 72 bp GATCTTCAAAGTGGTAGATGGCCACACAGTGACCTATaGGGGATGTGGGTTCCTCCTCGAAATCCTCATCAA +
Preference number: 6 (lower is better)
Translates to: DLQSGRWPHSDL*GMWVPPRNPHQ
Trigger: TTGATGAGGATTTCGAGGAGGAACCCACATCCCCCATAGGTCACTGTGTGGCCATCTACCACTTTGAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596758.5
CDS CAA 72 bp GTCATTCACCTCCTGGAGAATCTGTACGAAGGACTGTaGCTGGCTGAATTTGGACTCAGGATCATCCTTGGC +
Preference number: 6 (lower is better)
Translates to: VIHLLENLYEGL*LAEFGLRIILG
Trigger: GCCAAGGATGATCCTGAGTCCAAATTCAGCCAGCAACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596543.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
ENST00000601303.1
CDS CAA 72 bp ATAGAAGTGGGCTTGGTCTCGGTTGAAGCGCTGCAGTaGAGCCGCATATTCGTTTTTGCTTTCTTCGGCCAT +
Preference number: 6 (lower is better)
Translates to: IEVGLVSVEALQ*SRIFVFAFFGH
Trigger: ATGGCCGAAGAAAGCAAAAACGAATATGCGGCTCAACTGCAGCGCTTCAACCGAGACCAAGCCCACTTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 72 bp TCATTCACCTCCTGGAGAATCTGTACGAAGGACTGTTaGTGGCTGAATTTGGACTCAGGATCATCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: SFTSWRICTKDC*WLNLDSGSSLA
Trigger: TGCCAAGGATGATCCTGAGTCCAAATTCAGCCAGCAACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000595319.5
ENST00000596078.5
ENST00000596543.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
ENST00000601303.1
CDS GCA 72 bp TCCGCAGTTGTTTGGCGTAAGCCTGTTCCACTTCGGTaGGTTCTTTCACGAACTTTACATATCTGTCCAACA +
Preference number: 6 (lower is better)
Translates to: SAVVWRKPVPLR*VLSRTLHICPT
Trigger: TGTTGGACAGATATGTAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGGCTTACGCCAAACAACTGCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313244.14
ENST00000313285.12
ENST00000595305.5
ENST00000596078.5
ENST00000596543.5
ENST00000596758.5
ENST00000600428.5
ENST00000600491.5
ENST00000600677.5
CDS GCA 72 bp ACCGCAGTTGTTTGGCGTAAGCCTGTTCCACTTCGGTaGGTTCTTTCACGAACTTTACATATCTGTCCAACA +
Preference number: 6 (lower is better)
Translates to: TAVVWRKPVPLR*VLSRTLHICPT
Trigger: TGTTGGACAGATATGTAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGGCTTACGCCAAACAACTGCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595319.5
CDS CAA 72 bp AGCCACATCCCTGGCTCAAGAAGAGGAAGTCCGTCCTaGGGGATACTGGGAAAGGTAGTTTATTTAATGCTT +
Preference number: 6 (lower is better)
Translates to: SHIPGSRRGSPS*GILGKVVYLML
Trigger: AAGCATTAAATAAACTACCTTTCCCAGTATCCCCAAGGACGGACTTCCTCTTCTTGAGCCAGGGATGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600428.5
CDS GCA 72 bp ATCGCAGTTGTTTGGCGTAAGCCTGTTCCACTTCGGTaGGTTCTTTCACGAACTTTACATATCTGTCCAACA +
Preference number: 6 (lower is better)
Translates to: IAVVWRKPVPLR*VLSRTLHICPT
Trigger: TGTTGGACAGATATGTAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGGCTTACGCCAAACAACTGCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596673.1