RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIO (Homo sapiens)

Ensembl gene IDs: ENSG00000038382

Ensembl transcript IDs: ENST00000344135.5, ENST00000344204.9, ENST00000502490.1, ENST00000502816.1, ENST00000503399.1, ENST00000504606.1, ENST00000505971.5, ENST00000506611.1, ENST00000507714.1, ENST00000508283.5, ENST00000508343.1, ENST00000508717.1, ENST00000509354.1, ENST00000509967.6, ENST00000510281.1, ENST00000510757.1, ENST00000511019.1, ENST00000512070.6, ENST00000512303.1, ENST00000512979.1, ENST00000513206.5, ENST00000515144.5, ENST00000515710.1, ENST00000620511.1, ENST00000639876.2

Found 1923 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTaGTCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTGGCGGGGTCC +
Preference number: 1 (lower is better)
Translates to: VSRTPVLLPLPACSH*SWRASAAEGRLAGS
Trigger: GGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 90 bp TCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTaGAGGAGGAAGCACACGAACTCCTTGGCCTTCTGGCTCACTCCT +
Preference number: 1 (lower is better)
Translates to: SWRASAAEGRLAGSS*RRKHTNSLAFWLTP
Trigger: AGGAGTGAGCCAGAAGGCCAAGGAGTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 90 bp CTGGTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTaGTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCG +
Preference number: 1 (lower is better)
Translates to: LVGVSKVSRRPTSRG*WRLCRMPSSWVTWS
Trigger: CGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 90 bp CTGCAGTTGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTaGGCCCTGATCTTCCCTTCAGTGAGGCTTCCCCATCGCACCACG +
Preference number: 1 (lower is better)
Translates to: LQLCRYRTASRTSPR*ALIFPSVRLPHRTT
Trigger: CGTGGTGCGATGGGGAAGCCTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 90 bp TGCACTGGTGTGGCCCAGGACAAAGCCTGGAATCCAGCCCTCAGCTaGGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTT +
Preference number: 1 (lower is better)
Translates to: CTGVAQDKAWNPALS*GALVSGGSEHQKHV
Trigger: AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGCTGGATTCCAGGCTTTGTCCTGGGCCACACCAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 90 bp CCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGTAGCTaGTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGT +
Preference number: 1 (lower is better)
Translates to: PGGDPGQPFLRPGCS*WGSQRCRGGRQAGG
Trigger: ACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCACCAGCTACATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 90 bp CTTGAGTTGAAAGGACTCCCCACACCAGTGCGAATGCTGCCACAGTaGCTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAAT +
Preference number: 1 (lower is better)
Translates to: LELKGLPTPVRMLPQ*LGHWVPAAGRPVLN
Trigger: ATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGCACTGGTGTGGGGAGTCCTTTCAACTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
3UTR TCA 90 bp CTAGGACCCTCAGGCTGGCCGACGATGAGGCTGAACCCATGTCATTaGCAGCGATGCACGTGTAGATGCCGTCATCTTCCGTGGTCACGC +
Preference number: 1 (lower is better)
Translates to: LGPSGWPTMRLNPCH*QRCTCRCRHLPWSR
Trigger: GCGTGACCACGGAAGATGACGGCATCTACACGTGCATCGCTGTCAATGACATGGGTTCAGCCTCATCGTCGGCCAGCCTGAGGGTCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 90 bp TACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTaGCGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGC +
Preference number: 1 (lower is better)
Translates to: YCDTAMRPLPWAECK*RSSTPAQLAALCPS
Trigger: GCTTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
3UTR TCA 90 bp CAAAAGTTTGAGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTaGGATGCACACAGACGAGGCGCCTGGAAGCTCAGAGCCGAGTGG +
Preference number: 1 (lower is better)
Translates to: QKFEVECTFQKPRRA*DAHRRGAWKLRAEW
Trigger: CCACTCGGCTCTGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCTCAAACTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR CCA 90 bp CCGACAAGCAGGGGGTGCTGGAGGCTCTGCAGGATGCCAAGCTCATaGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTA +
Preference number: 1 (lower is better)
Translates to: PTSRGCWRLCRMPSS*VTWSRFINFLFTNL
Trigger: TAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCACCCCCTGCTTGTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTaGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACG +
Preference number: 1 (lower is better)
Translates to: KLNYASLWLKTQVSG*LGKRAGLFCSAVHT
Trigger: CGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
3UTR CCA 90 bp ACCGTGGATTTGCAGACAGACCTGGCAATGTCTGTAGAGTGCCGCTaGGCATCAGGAACCTGGGAGCCATTCTGCACAAATGCCAGTTAT +
Preference number: 1 (lower is better)
Translates to: TVDLQTDLAMSVECR*ASGTWEPFCTNASY
Trigger: ATAACTGGCATTTGTGCAGAATGGCTCCCAGGTTCCTGATGCCCAGCGGCACTCTACAGACATTGCCAGGTCTGTCTGCAAATCCACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
3UTR TCA 90 bp ACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATTaGGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGT +
Preference number: 1 (lower is better)
Translates to: TIVVQGVVFRALPGN*GFGAATDSTSKNNG
Trigger: ACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 90 bp GCTGGTTGCTGGCCAGAATTTGAACGACCTCTCCTTGGTAGACGTTaGTCTCATCCTCCTTCACTGCCGTGTAATCGTGTGTCACCAACA +
Preference number: 1 (lower is better)
Translates to: AGCWPEFERPLLGRR*SHPPSLPCNRVSPT
Trigger: TGTTGGTGACACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGAGAGGTCGTTCAAATTCTGGCCAGCAACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 90 bp TTGAACGACCTCTCCTTGGTAGACGTTGATCTCATCCTCCTTCACTaGCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTACT +
Preference number: 1 (lower is better)
Translates to: LNDLSLVDVDLILLH*RVIVCHQHGGDVAT
Trigger: AGTAGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGAGAGGTCGTTCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 90 bp CTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTaGTGTTTGCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCG +
Preference number: 1 (lower is better)
Translates to: LCRKFLMLRIGRTSF*CLRRSMKEVSLDVS
Trigger: CGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGCAAACACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 90 bp TTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTaGTCACATTTCTTAACGACAGAGAATCTGCCCCTGCCAAGCTCA +
Preference number: 1 (lower is better)
Translates to: FLFTNLVATARLVPF*SHFLTTENLPLPSS
Trigger: TGAGCTTGGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 90 bp TCTAAGAACAACGGTCTCCCCTGTCTCACACGTGACCTCACTCAATaGAATGACGAATTCTGGGGGAACGTCATAAATGTAGTTGGGATT +
Preference number: 1 (lower is better)
Translates to: SKNNGLPCLTRDLTQ*NDEFWGNVINVVGI
Trigger: AATCCCAACTACATTTATGACGTTCCCCCAGAATTCGTCATTCCATTGAGTGAGGTCACGTGTGAGACAGGGGAGACCGTTGTTCTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 90 bp CTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGGCCACTaGTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAA +
Preference number: 1 (lower is better)
Translates to: LVALHQLLVHKLSGH*SLGSFLITFLNDRE
Trigger: TTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 90 bp CAAGCACTGCTGAGCACAGCTCACTTGGAATGCAATTTCACACGATaGACATACCGGCAGCTGATCAGTTATGTTTGCTTGTTTTCTCTT +
Preference number: 1 (lower is better)
Translates to: QALLSTAHLECNFTR*TYRQLISYVCLFSL
Trigger: AAGAGAAAACAAGCAAACATAACTGATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTCAGCAGTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
3UTR-3UTR CCA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCCGGGGCACTGGTCAGTaGCGGCTCGGAACACCAGAA +
Preference number: 2 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSRGTGQ*RLGTPE
Trigger: TTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCG...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCCACCCCAGCGCAGCTTaGAGCTCTGTGTCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCHPSAA*SSVSKH
Trigger: GTGCTTGGACACAGAGCTGCAAGCTGCGCTGGGGTG...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACGTTCTCCACGATGACTaGACTGGTGTGGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNVLHDD*TGVAQD
Trigger: GTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAAC...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCAACAAGGCCATGGGAGTaGCCGCCACCTAGGTGCGTC +
Preference number: 2 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSTRPWE*PPPRCV
Trigger: GACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGT...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATCAGCTGCGGGGCACTaGTCAGTGGCGGCTCGGAAC +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQSAAGH*SVAARN
Trigger: GTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCATGACTGCACTGGTGTaGCCCAGGACAAAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLMTALV*PRTKPG
Trigger: TCCAGGCTTTGTCCTGGGCCACACCAGTGCAGTCAT...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CCA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACTGCCGTCATCTTCCGTaGTCACGCCCACAATCTTCA +
Preference number: 2 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNCRHLP*SRPQSS
Trigger: TGAAGATTGTGGGCGTGACCACGGAAGATGACGGCA...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATGGGCAGAGTGTAAGTaGCGGTCCTCCACCCCAGCG +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQWAECK*RSSTPA
Trigger: CGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
3UTR-3UTR TCA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACCTCCTTGGTAGACGTTaGTCTCATCCTCCTTCACTG +
Preference number: 2 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNLLGRR*SHPPSL
Trigger: CAGTGAAGGAGGATGAGATCAACGTCTACCAAGGAG...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp GCTATCCTGCAGTTGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTTCCAGGTAATTaGGGCTTTGGGGCGGCCACA +
Preference number: 2 (lower is better)
Translates to: AILQLCRYRTASRTSPRCALPGN*GFGAAT
Trigger: TGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGC...GCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAACAAGGCCATGGGAGTaGCCGCCACCTAGGTGCGTC +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQTRPWE*PPPRCV
Trigger: GACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR CCA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCCAGGACAAAGCCTaGAATCCAGCCCTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: APLNEGSQSGRVEDARASAQDKA*NPALSC
Trigger: GCAGCTGAGGGCTGGATTCCAGGCTTTGTCCTGGGC...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGCAGCAATGCGACCTCTaGCTTGGGCAGAGTGTAAGT +
Preference number: 2 (lower is better)
Translates to: PRQGHGSGRHLGASSPETQQCDL*LGQSVS
Trigger: ACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTG...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR CCA 90 bp TCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCTGGCCACTGCTCGCTTaGTTCCTTTCTGATCACATT +
Preference number: 2 (lower is better)
Translates to: SVWTCRGRPCFCRCRPAAWPLLA*FLSDHI
Trigger: AATGTGATCAGAAAGGAACCAAGCGAGCAGTGGCCA...GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CCA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCAGCTCATGGGTGACCTaGTCGCGCTTCATCAACTTC +
Preference number: 2 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPASSWVT*SRFINF
Trigger: GAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGTCCAGGAGGCGACCCTaGTCAGCCATTTCTAAGACC +
Preference number: 2 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSESRRRP*SAISKT
Trigger: GGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGA...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGGTGTCCAAGCACTGCTaGGCACAGCTCACTTGGAAT +
Preference number: 2 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSEVSKHC*AQLTWN
Trigger: ATTCCAAGTGAGCTGTGCTCAGCAGTGCTTGGACAC...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGAGCCGAGTGGTCTCTaGGTCCTAGACAAGGCCATG +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQEPSGL*VLDKAM
Trigger: CATGGCCTTGTCTAGGACTCAGAGACCACTCGGCTC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp GCTATCCTGCAGTTGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCTGAGTCCTTCCCGTaGCTTCCGATAACCGTTCTC +
Preference number: 2 (lower is better)
Translates to: AILQLCRYRTASRTSPRCAESFP*LPITVL
Trigger: GAGAACGGTTATCGGAAGTCACGGGAAGGACTCAGC...GCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACAAACGGAGTGCTGTGTaGCAAGATGTTGACTTCTTG +
Preference number: 2 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNKRSAV*QDVDFL
Trigger: CAAGAAGTCAACATCTTGGCACACAGCACTCCGTTT...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CAA 90 bp ACCAGGATATTCTCAGGCTTTAGGTCCAGGTGTGCTATCCTGCAGTaGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCC +
Preference number: 2 (lower is better)
Translates to: TRIFSGFRSRCAILQ*CRYRTASRTSPRCA
Trigger: GGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGCACACCTGGACCTAAAGCCTGAGAATATCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGGGCAGGACCCAACCTaGTGTCTTCATGTGATGGGA +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQGQDPT*CLHVMG
Trigger: TCCCATCACATGAAGACATCAGGTTGGGTCCTGCCC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATACTGCTCCACAATCTaGTTGACGGCTTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQYCSTI*LTAWGR
Trigger: CCTGCCCCAAGCCGTCAATCAGATTGTGGAGCAGTA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGAAACCCAGCCTCCTTaGGTTGAAAGGACTCCCCAC +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQETQPP*VERTPH
Trigger: GTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCCCGGGTTCTCCACGATaGCTGCACTGGTGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSPGSPR*LHWCGP
Trigger: TGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGG...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAACGTCGGGCGTGAGATaGACACAGACGAGGCGCCTG +
Preference number: 2 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGTSGVR*TQTRRL
Trigger: CAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGCGATGCACGTGTAGATaGCGTCATCTTCCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMRCTCR*RHLPWS
Trigger: TGACCACGGAAGATGACGGCATCTACACGTGCATCG...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGCACCCCAGCGCAGCTTaGAGCTCTGTGTCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGHPSAA*SSVSKH
Trigger: GTGCTTGGACACAGAGCTGCAAGCTGCGCTGGGGTG...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTCTGTAGAGTGCCGCTaGGCATCAGGAACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPSVECR*ASGTWE
Trigger: CTCCCAGGTTCCTGATGCCCAGCGGCACTCTACAGA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
3UTR-3UTR CCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTGTTCTGCTGGTTGCTaGCCAGAATTTGAACGACCT +
Preference number: 2 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQCSAGC*PEFERP
Trigger: AGGTCGTTCAAATTCTGGCCAGCAACCAGCAGAACA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CCA 90 bp ACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTTGGAATGACGAATTCTaGGGGAACGTCATAAATGTA +
Preference number: 2 (lower is better)
Translates to: TCRGRPCFCRCRPAATAPWNDEF*GNVINV
Trigger: TACATTTATGACGTTCCCCCAGAATTCGTCATTCCA...AGGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTTGGGCAGAGTGTAAGTaGCGGTCCTCCACCCCAGCG +
Preference number: 2 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSWAECK*RSSTPA
Trigger: CGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCA...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTAAGCCACGTCGGGCGTaGGATGCACACAGACGAGGC +
Preference number: 2 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGKPRRA*DAHRRG
Trigger: GCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGAGGCAGGTGGGAAAATaGCAGACCGAAGGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKRQVGK*QTEGRN
Trigger: GTTCCTGCCTTCGGTCTGTCATTTTCCCACCTGCCT...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTTGGCCGCCACCTAGGTaGGTCTTCCCCAGAGACGCA +
Preference number: 2 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGWPPPR*VFPRDA
Trigger: TGCGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCA...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR CCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAGGATGCCAAGCTCATaGGTGACCTGGTCGCGCTTC +
Preference number: 2 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSRMPSS*VTWSRF
Trigger: GAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATGCAATTTCACACGATaGACATACCGGCAGCTGATC +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQCNFTR*TYRQLI
Trigger: GATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
3UTR-3UTR TCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGTGTCCAAGCACTGCTaGGCACAGCTCACTTGGAAT +
Preference number: 2 (lower is better)
Translates to: RLNARFRSHVGREMHTDEVSKHC*AQLTWN
Trigger: ATTCCAAGTGAGCTGTGCTCAGCAGTGCTTGGACAC...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp TCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCTGCCTGGGCAGAGTGTAAGTaGCGGTCCTCCACCCCAGCG +
Preference number: 2 (lower is better)
Translates to: SLGSFLITFLNDRESAPAWAECK*RSSTPA
Trigger: CGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCA...GGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACCTGATGTCTTCATGTaGTGGGAAGACCCTCGGACC +
Preference number: 2 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGPDVFM*WEDPRT
Trigger: GGTCCGAGGGTCTTCCCATCACATGAAGACATCAGG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGCAGCAATGCGACCTCTaGCTTGGGCAGAGTGTAAGT +
Preference number: 2 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKQQCDL*LGQSVS
Trigger: ACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTG...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCCCAGGTGTGCTATCCTaGAGTTGTGCAGGTACCGGA +
Preference number: 2 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSPGVLS*SCAGTG
Trigger: TCCGGTACCTGCACAACTGCAGGATAGCACACCTGG...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CAA 90 bp TCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTaGCAGACAGACCTGGCAATGTCTGTAGAGTGCCGCTGGGCATCA +
Preference number: 2 (lower is better)
Translates to: SKVHTSNSIRPSTVD*QTDLAMSVECRWAS
Trigger: TGATGCCCAGCGGCACTCTACAGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
3UTR CAA 90 bp TTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATTGAGGCTTaGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: LFKVLCSGPFQVIEA*GRPQTRHLRTTVSP
Trigger: AGGGGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGAACATACCGGCAGCTaGTCAGTTATGTTTGCTTGT +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQEHTGS*SVMFAC
Trigger: ACAAGCAAACATAACTGATCAGCTGCCGGTATGTTC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
3UTR-3UTR TCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAGTGTCCAAGCACTGCTaGGCACAGCTCACTTGGAAT +
Preference number: 2 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKVSKHC*AQLTWN
Trigger: ATTCCAAGTGAGCTGTGCTCAGCAGTGCTTGGACAC...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCAGCCTCCTTGAGTTaGAAGGACTCCCCACACCAG +
Preference number: 2 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGPASLS*KDSPHQ
Trigger: CTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGG...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCACTGTGATACAGCAATaGGACCTCTGCCTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSTVIQQ*DLCLGQ
Trigger: CTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGT...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAACGTCGGGCGTGAGATaGACACAGACGAGGCGCCTG +
Preference number: 2 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKTSGVR*TQTRRL
Trigger: CAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGT...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTGACTCCCCACACCAGTaGGAATGCTGCCACAGTGAC +
Preference number: 2 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGDSPHQ*ECCHSD
Trigger: GTCACTGTGGCAGCATTCGCACTGGTGTGGGGAGTC...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAACATGTTCTGCTGGTTaGTGGCCAGAATTTGAACGA +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQTCSAG*WPEFER
Trigger: TCGTTCAAATTCTGGCCAGCAACCAGCAGAACATGT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACCAGAGAATCTGCCCCTaGCAAGCTCAGCCACTTCAC +
Preference number: 2 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDQRICP*QAQPLH
Trigger: GTGAAGTGGCTGAGCTTGGCAGGGGCAGATTCTCTG...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACACAGACGAGGCGCCTaGAAGCTCAGAGCCGAGTGG +
Preference number: 2 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKHRRGA*KLRAEW
Trigger: CCACTCGGCTCTGAGCTTCCAGGCGCCTCGTCTGTG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCTGCAATTTCACACGATaGACATACCGGCAGCTGATC +
Preference number: 2 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTCNFTR*TYRQLI
Trigger: GATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCA...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAACGCTTGGTTCCTTTCTaGTCACATTTCTTAACGACA +
Preference number: 2 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQRLVPF*SHFLTT
Trigger: TGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCG...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGAATCCAGCCCTCAGCTaGGGGGCACTGGTCAGTGGC +
Preference number: 2 (lower is better)
Translates to: PALQKVFNATDRSNIILVNPALS*GALVSG
Trigger: GCCACTGACCAGTGCCCCGCAGCTGAGGGCTGGATT...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACCGTGACCTCACTCAATaGAATGACGAATTCTGGGGG +
Preference number: 2 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNRDLTQ*NDEFWG
Trigger: CCCCCAGAATTCGTCATTCCATTGAGTGAGGTCACG...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGATGCAATTTCACACGATaGACATACCGGCAGCTGATC +
Preference number: 2 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGCNFTR*TYRQLI
Trigger: GATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCA...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAGAGCCGAGTGGTCTCTaGGTCCTAGACAAGGCCATG +
Preference number: 2 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKEPSGL*VLDKAM
Trigger: CATGGCCTTGTCTAGGACTCAGAGACCACTCGGCTC...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGAAGCCACGTCGGGCGTaGGATGCACACAGACGAGGC +
Preference number: 2 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEKPRRA*DAHRRG
Trigger: GCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTT...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACGAATGCTGCCACAGTaGCTCGGGCATTGGGTACCA +
Preference number: 2 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKRMLPQ*LGHWVP
Trigger: TGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
3UTR-3UTR TCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGGAACATACCGGCAGCTaGTCAGTTATGTTTGCTTGT +
Preference number: 2 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGEHTGS*SVMFAC
Trigger: ACAAGCAAACATAACTGATCAGCTGCCGGTATGTTC...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAAGGCAGGTGGGAAAATaGCAGACCGAAGGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKRQVGK*QTEGRN
Trigger: GTTCCTGCCTTCGGTCTGTCATTTTCCCACCTGCCT...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACCAAAGTCAGCCAGTTTaGTGGTTGGCTTGGCTAAAC +
Preference number: 2 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDQSQPV*WLAWLN
Trigger: GTTTAGCCAAGCCAACCATCAAACTGGCTGACTTTG...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp ATGGTTGGCTTGGCTAAACTCTCATCCACCAGGATATTCTCAGGCTTTAGGTCCCAGCAATGCGACCTCTaGCTTGGGCAGAGTGTAAGT +
Preference number: 2 (lower is better)
Translates to: MVGLAKLSSTRIFSGFRSQQCDL*LGQSVS
Trigger: ACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTG...GGACCTAAAGCCTGAGAATATCCTGGTGGATGAGAGTTTAGCCAAGCCAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTGGGCATCAGGAACCTaGGAGCCATTCTGCACAAAT +
Preference number: 2 (lower is better)
Translates to: SSLKCTLQTASGQAPWICWASGT*EPFCTN
Trigger: ATTTGTGCAGAATGGCTCCCAGGTTCCTGATGCCCA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
3UTR-3UTR CCA 90 bp AGAAGCCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCCTAGGACCCTCAGGCTaGCCGACGATGAGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: RSLLCRKFLMLRIGRTSFLGPSG*PTMRLN
Trigger: GTTCAGCCTCATCGTCGGCCAGCCTGAGGGTCCTAG...GAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGGCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCATTCAGATTAACAGCTaGTTGGCAGGTGAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTIQINS*LAGERE
Trigger: TTCTCTTTCACCTGCCAATCAGCTGTTAATCTGAAT...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAAGTTTGAGGTTGAATaGACGTTTCAGAAGCCACGT +
Preference number: 2 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGKFEVE*TFQKPR
Trigger: ACGTGGCTTCTGAAACGTGCATTCAACCTCAAACTT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAATTCAGATTAACAGCTaGTTGGCAGGTGAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGIQINS*LAGERE
Trigger: TTCTCTTTCACCTGCCAATCAGCTGTTAATCTGAAT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR TCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACATTCAGATTAACAGCTaGTTGGCAGGTGAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNIQINS*LAGERE
Trigger: TTCTCTTTCACCTGCCAATCAGCTGTTAATCTGAAT...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGATACAGTATTTTCATCTaGCTGTGTACTGCTCCACAA +
Preference number: 2 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGYSIFI*LCTAPQ
Trigger: TTGTGGAGCAGTACACAGTCAGATGAAAATACTGTA...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTAAGTTTGAGGTTGAATaGACGTTTCAGAAGCCACGT +
Preference number: 2 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGKFEVE*TFQKPR
Trigger: ACGTGGCTTCTGAAACGTGCATTCAACCTCAAACTT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR CCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAGATTAACAGCTGATTaGCAGGTGAAAGAGAATGAG +
Preference number: 2 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTRLTAD*QVKENE
Trigger: CTCATTCTCTTTCACCTGCCAATCAGCTGTTAATCT...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp AGAAGCCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCCTGAACCCATGTCATTaGCAGCGATGCACGTGTAGA +
Preference number: 2 (lower is better)
Translates to: RSLLCRKFLMLRIGRTSFLNPCH*QRCTCR
Trigger: TCTACACGTGCATCGCTGTCAATGACATGGGTTCAG...GAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGGCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGACCTGGGAGCCATTCTaGACAAATGCCAGTTATTCC +
Preference number: 2 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSTWEPF*TNASYS
Trigger: GGAATAACTGGCATTTGTGCAGAATGGCTCCCAGGT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
3UTR-3UTR GCA 90 bp AGAAGCCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCGGTCACTGTAGGAGATaGTGTAGTGACCATCGTTGT +
Preference number: 2 (lower is better)
Translates to: RSLLCRKFLMLRIGRTSFGHCRR*CSDHRC
Trigger: ACAACGATGGTCACTACAGCATCTCCTACAGTGACC...GAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGGCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR TCA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCAAATGTAGTTGGGATTaGGAAGCTTCACAGATACCT +
Preference number: 2 (lower is better)
Translates to: HCSLGSFLITFLNDRESAKCSWD*EASQIP
Trigger: AGGTATCTGTGAAGCTTCTCAATCCCAACTACATTT...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGGCCATTCTGCACAAATaGCAGTTATTCCCAGTTTAC +
Preference number: 2 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSAILHK*QLFPVY
Trigger: GTAAACTGGGAATAACTGGCATTTGTGCAGAATGGC...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
3UTR-3UTR CCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAAGATTAACAGCTGATTaGCAGGTGAAAGAGAATGAG +
Preference number: 2 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSRLTAD*QVKENE
Trigger: CTCATTCTCTTTCACCTGCCAATCAGCTGTTAATCT...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATTTTCTTCTCTAAAGTaGACACTTCAAACAGCATCC +
Preference number: 2 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPFSSLK*TLQTAS
Trigger: GGATGCTGTTTGAAGTGTGCACTTTAGAGAAGAAAA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
3UTR GCA 72 bp ACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTaGTCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTG +
Preference number: 3 (lower is better)
Translates to: TPVLLPLPACSH*SWRASAAEGRL
Trigger: CAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CAA 90 bp ACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTGCAGCCGAGGGACGCTaGGCGGGGTCCTCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: TCRGRPCFCRCRPAATAPAAEGR*AGSSCR
Trigger: CCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGC...AGGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 72 bp GCCAGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTaGAGGAGGAAGCACACGAACTCCTTGGCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: ASAAEGRLAGSS*RRKHTNSLAFW
Trigger: CCAGAAGGCCAAGGAGTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 72 bp ACTGCTCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTaGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACT +
Preference number: 3 (lower is better)
Translates to: TAPGGPAQPRDA*RGPPAGGSTRT
Trigger: AGTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGAGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 72 bp GTGGCCCAGGACAAAGCCTGGAATCCAGCCCTCAGCTaGGGGGCACTGGTCAGTGGCGGCTCGGAACACCAG +
Preference number: 3 (lower is better)
Translates to: VAQDKAWNPALS*GALVSGGSEHQ
Trigger: CTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGCTGGATTCCAGGCTTTGTCCTGGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 72 bp AAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTaGCGTTGCCGGCCTGCAGCCACTGCTCCTGGAGGG +
Preference number: 3 (lower is better)
Translates to: KSVWTCRGRPCF*RCRPAATAPGG
Trigger: CCCTCCAGGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CAA 90 bp GCTCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGATCGTTGTTCAAGGTGTaGTGTTCAGGGCCCTTCCAG +
Preference number: 3 (lower is better)
Translates to: APGGPAQPRDAWRGPPAGSLFKV*CSGPFQ
Trigger: CTGGAAGGGCCCTGAACACAACACCTTGAACAACGA...TCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 72 bp GACGAGGCGCCTGGAAGCTCAGAGCCGAGTGGTCTCTaGGTCCTAGACAAGGCCATGGGAGTGGCCGCCACC +
Preference number: 3 (lower is better)
Translates to: DEAPGSSEPSGL*VLDKAMGVAAT
Trigger: GGTGGCGGCCACTCCCATGGCCTTGTCTAGGACTCAGAGACCACTCGGCTCTGAGCTTCCAGGCGCCTCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR TCA 72 bp AAAGGACTCCCCACACCAGTGCGAATGCTGCCACAGTaGCTCGGGCATTGGGTACCAGCCGCGGGGCGGCCA +
Preference number: 3 (lower is better)
Translates to: KGLPTPVRMLPQ*LGHWVPAAGRP
Trigger: TGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGCACTGGTGTGGGGAGTCCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
3UTR-3UTR CAA 90 bp GCTCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGATTCACAGATACCTTGTaGCTGAGTCCTTCCCGTGAC +
Preference number: 3 (lower is better)
Translates to: APGGPAQPRDAWRGPPAGFTDTL*LSPSRD
Trigger: GTCACGGGAAGGACTCAGCAACAAGGTATCTGTGAA...TCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 72 bp GGGCAGTGGGGCAGGACCCAACCTGATGTCTTCATGTaGTGGGAAGACCCTCGGACCCCCAGAGGAAGCCCC +
Preference number: 3 (lower is better)
Translates to: GQWGRTQPDVFM*WEDPRTPRGSP
Trigger: GGGGCTTCCTCTGGGGGTCCGAGGGTCTTCCCATCACATGAAGACATCAGGTTGGGTCCTGCCCCACTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR CAA 90 bp GCTCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGACCAAAGTCAGCCAGTTaGATGGTTGGCTTGGCTAAA +
Preference number: 3 (lower is better)
Translates to: APGGPAQPRDAWRGPPAGPKSAS*MVGLAK
Trigger: TTTAGCCAAGCCAACCATCAAACTGGCTGACTTTGG...TCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CAA 90 bp GCTATCCTGCAGTTGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTGCCCACCCCAGCGCAGCTaGCAGCTCTGTGTCCAAGCA +
Preference number: 3 (lower is better)
Translates to: AILQLCRYRTASRTSPRCPPQRS*QLCVQA
Trigger: TGCTTGGACACAGAGCTGCAAGCTGCGCTGGGGTGG...GCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 72 bp GCACACAGACGAGGCGCCTGGAAGCTCAGAGCCGAGTaGTCTCTGAGTCCTAGACAAGGCCATGGGAGTGGC +
Preference number: 3 (lower is better)
Translates to: AHRRGAWKLRAE*SLSPRQGHGSG
Trigger: GCCACTCCCATGGCCTTGTCTAGGACTCAGAGACCACTCGGCTCTGAGCTTCCAGGCGCCTCGTCTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR CCA 72 bp CACGATGACTGCACTGGTGTGGCCCAGGACAAAGCCTaGAATCCAGCCCTCAGCTGCGGGGCACTGGTCAGT +
Preference number: 3 (lower is better)
Translates to: HDDCTGVAQDKA*NPALSCGALVS
Trigger: ACTGACCAGTGCCCCGCAGCTGAGGGCTGGATTCCAGGCTTTGTCCTGGGCCACACCAGTGCAGTCATCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 72 bp GTCCCGTCCGGGTTCTCCACGATGACTGCACTGGTGTaGCCCAGGACAAAGCCTGGAATCCAGCCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: VPSGFSTMTALV*PRTKPGIQPSA
Trigger: AGCTGAGGGCTGGATTCCAGGCTTTGTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGGACGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CAA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACAGCTTCACAGATACCTaGTTGCTGAGTCCTTCCCGT +
Preference number: 3 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNSFTDT*LLSPSR
Trigger: ACGGGAAGGACTCAGCAACAAGGTATCTGTGAAGCT...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 72 bp ACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTaGCGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: TAMRPLPWAECK*RSSTPAQLAAL
Trigger: CAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
3UTR GCA 72 bp TGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTaGGCCCTGATCTTCCCTTCAGTGAGGCTTCCCCAT +
Preference number: 3 (lower is better)
Translates to: CRYRTASRTSPR*ALIFPSVRLPH
Trigger: ATGGGGAAGCCTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CAA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAACAGTGACTCGGGCATaGGGTACCAGCCGCGGGGCG +
Preference number: 3 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGTVTRA*GTSRGA
Trigger: CGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
3UTR-3UTR CAA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCAGTTTGATGGTTGGCTaGGCTAAACTCTCATCCACC +
Preference number: 3 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPASLMVG*AKLSST
Trigger: GGTGGATGAGAGTTTAGCCAAGCCAACCATCAAACT...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 72 bp GAGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTaGGATGCACACAGACGAGGCGCCTGGAAGCTCAGA +
Preference number: 3 (lower is better)
Translates to: EVECTFQKPRRA*DAHRRGAWKLR
Trigger: TCTGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR TCA 72 bp ACTTCGAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTaGAAGGACTCCCCACACCAGTGCGAATGCTGCCAC +
Preference number: 3 (lower is better)
Translates to: TSRVPRNPASLS*KDSPHQCECCH
Trigger: GTGGCAGCATTCGCACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTCGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
3UTR GCA 72 bp CTTCTTGAGAGTCCCGTCCGGGTTCTCCACGATGACTaGACTGGTGTGGCCCAGGACAAAGCCTGGAATCCA +
Preference number: 3 (lower is better)
Translates to: LLESPVRVLHDD*TGVAQDKAWNP
Trigger: TGGATTCCAGGCTTTGTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGGACGGGACTCTCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 72 bp AGGGGGTGCTGGAGGCTCTGCAGGATGCCAAGCTCATaGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTC +
Preference number: 3 (lower is better)
Translates to: RGCWRLCRMPSS*VTWSRFINFLF
Trigger: GAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CAA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGAATCTGATTGACGGCTaGGGGCAGGAACAGGGGGAG +
Preference number: 3 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKNLIDG*GQEQGE
Trigger: CTCCCCCTGTTCCTGCCCCAAGCCGTCAATCAGATT...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR TCA 72 bp TCAGGCTGGCCGACGATGAGGCTGAACCCATGTCATTaGCAGCGATGCACGTGTAGATGCCGTCATCTTCCG +
Preference number: 3 (lower is better)
Translates to: SGWPTMRLNPCH*QRCTCRCRHLP
Trigger: CGGAAGATGACGGCATCTACACGTGCATCGCTGTCAATGACATGGGTTCAGCCTCATCGTCGGCCAGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 72 bp GACCCTGGTCAGCCATTTCTAAGACCAGGATGTAGCTaGTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAA +
Preference number: 3 (lower is better)
Translates to: DPGQPFLRPGCS*WGSQRCRGGRQ
Trigger: TTGTCGGCCTCCTCGACACCTTTGAGACCCCCACCAGCTACATCCTGGTCTTAGAAATGGCTGACCAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 72 bp GGTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTaGCCTGGTCGCGCTTCATCAACTTCTTGTTCACAA +
Preference number: 3 (lower is better)
Translates to: GAGGSAGCQAHG*PGRASSTSCSQ
Trigger: TTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 72 bp TACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTaGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCA +
Preference number: 3 (lower is better)
Translates to: YASLWLKTQVSG*LGKRAGLFCSA
Trigger: TGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
3UTR-3UTR CAA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACCACCCCAGCGCAGCTaGCAGCTCTGTGTCCAAGCA +
Preference number: 3 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKPPQRS*QLCVQA
Trigger: TGCTTGGACACAGAGCTGCAAGCTGCGCTGGGGTGG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR CAA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTAATCTGATTGACGGCTaGGGGCAGGAACAGGGGGAG +
Preference number: 3 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGNLIDG*GQEQGE
Trigger: CTCCCCCTGTTCCTGCCCCAAGCCGTCAATCAGATT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR CAA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGTCACGAAAAGTCTCTTaGAACCGATGGCACAGGGCT +
Preference number: 3 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKSRKVS*NRWHRA
Trigger: AGCCCTGTGCCATCGGTTCAAAGAGACTTTTCGTGA...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR CCA 72 bp ACACTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATaGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAG +
Preference number: 3 (lower is better)
Translates to: TLEAAKLNYASL*LKTQVSGWLGK
Trigger: CTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
3UTR-3UTR CAA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATGCAAAAGTTTGAGGTaGAATGCACGTTTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQCKSLR*NARFRS
Trigger: GCTTCTGAAACGTGCATTCAACCTCAAACTTTTGCA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR-3UTR CAA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCTTGAACGACCTCTCCTaGGTAGACGTTGATCTCATC +
Preference number: 3 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSLNDLS*VDVDLI
Trigger: GATGAGATCAACGTCTACCAAGGAGAGGTCGTTCAA...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 72 bp TGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTaGTCGCGCTTCATCAACTTCTTGTTCACAAACTTA +
Preference number: 3 (lower is better)
Translates to: WRLCRMPSSWVT*SRFINFLFTNL
Trigger: TAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR TCA 72 bp TGGCCAGAATTTGAACGACCTCTCCTTGGTAGACGTTaGTCTCATCCTCCTTCACTGCCGTGTAATCGTGTG +
Preference number: 3 (lower is better)
Translates to: WPEFERPLLGRR*SHPPSLPCNRV
Trigger: CACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGAGAGGTCGTTCAAATTCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 72 bp CTCTCCTTGGTAGACGTTGATCTCATCCTCCTTCACTaGCGTGTAATCGTGTGTCACCAACATGGTGGAGAT +
Preference number: 3 (lower is better)
Translates to: LSLVDVDLILLH*RVIVCHQHGGD
Trigger: ATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR CCA 72 bp AACGGTCTCCCCTGTCTCACACGTGACCTCACTCAATaGAATGACGAATTCTGGGGGAACGTCATAAATGTA +
Preference number: 3 (lower is better)
Translates to: NGLPCLTRDLTQ*NDEFWGNVINV
Trigger: TACATTTATGACGTTCCCCCAGAATTCGTCATTCCATTGAGTGAGGTCACGTGTGAGACAGGGGAGACCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGCCAAGCACCGTGGATTaGCAGACAGACCTGGCAATG +
Preference number: 3 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSPSTVD*QTDLAM
Trigger: CATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGG...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
3UTR-3UTR CAA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCGTTGCTGGCCAGAATTaGAACGACCTCTCCTTGGTA +
Preference number: 3 (lower is better)
Translates to: HCSLGSFLITFLNDRESAVAGQN*NDLSLV
Trigger: TACCAAGGAGAGGTCGTTCAAATTCTGGCCAGCAAC...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGATAAGGACTAGCGGCTaGTGTGTGGGAAATGACACC +
Preference number: 3 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSIRTSG*CVGNDT
Trigger: GGTGTCATTTCCCACACACAAGCCGCTAGTCCTTAT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
3UTR TCA 72 bp CTGAGCACAGCTCACTTGGAATGCAATTTCACACGATaGACATACCGGCAGCTGATCAGTTATGTTTGCTTG +
Preference number: 3 (lower is better)
Translates to: LSTAHLECNFTR*TYRQLISYVCL
Trigger: CAAGCAAACATAACTGATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
3UTR CCA 72 bp AAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTaGTGTTTGCGCCGCTCAATGAAGGAAGTCAGTCTG +
Preference number: 3 (lower is better)
Translates to: KFLMLRIGRTSF*CLRRSMKEVSL
Trigger: CAGACTGACTTCCTTCATTGAGCGGCGCAAACACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
3UTR GCA 72 bp CTTCATCAACTTCTTGTTCACAAACTTAGTGGCCACTaGTCGCTTGGTTCCTTTCTGATCACATTTCTTAAC +
Preference number: 3 (lower is better)
Translates to: LHQLLVHKLSGH*SLGSFLITFLN
Trigger: GTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCGCTGCTGGATGGCCATaGGTGGCGGCAGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSAAGWP*VAAGAR
Trigger: CCGTGCCCCTGCCGCCACCCATGGCCATCCAGCAGC...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACGCCGCACGGGGCTGGTaGGCCACTTGCGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNAARGW*ATCAGC
Trigger: ACACCCTGCGCAAGTGGCTCACCAGCCCCGTGCGGC...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGGACCGGCCCCAGCCTaGACTGCAGAGCCGCCTCGC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGGPAPA*TAEPPR
Trigger: GCGAGGCGGCTCTGCAGTGCAGGCTGGGGCCGGTCC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR CCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCTGTTGCCCGGCCGCTTaGGGCCCGGCGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLCCPAA*GPASSG
Trigger: CCCAGAGCTCGCCGGGCCCCAAGCGGCCGGGCAACA...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGCGTGGCGGGGTGTCTaGCGCTGGAGGGAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGAWRGV*RWRESL
Trigger: CAGCGACTCCCTCCAGCGGCAGACACCCCGCCACGC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GCTCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGGTGCTGGAGGCTCTaGAGGATGCCAAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: APGGPAQPRDAWRGPPAGGCWRL*RMPSSW
Trigger: CCATGAGCTTGGCATCCTGCAGAGCCTCCAGCACCC...TCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTCAGCTGCGGGGCACTaGTCAGTGGCGGCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSSAAGH*SVAARN
Trigger: GTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGA...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCGGGGACCAGGCCTTCTaGCGCTGGGGAGCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLGDQAF*RWGAVS
Trigger: ACTGACCGCTCCCCAGCGGCAGAAGGCCTGGTCCCC...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TCAGTGAGGCTTCCCCATCGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCTCGTCGGAGTCCTTCTaGGAGCCGGCGTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: SVRLPHRTTQSRRRPWSASSESF*EPASAL
Trigger: GAGCGCCGACGCCGGCTCGCAGAAGGACTCCGACGA...GGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCGATGGGGAAGCCTCACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCTCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAAGATGCGCCTCTCTCTaGAGCGAGGCAGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: APGGPAQPRDAWRGPPAGRCASL*SEAEVL
Trigger: CAGGACTTCTGCCTCGCTGCAGAGAGAGGCGCATCT...TCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp ACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTTGCCTGGCTCGAGGCTaGAGAGGAGACCAGCACGGG +
Preference number: 4 (lower is better)
Translates to: TCRGRPCFCRCRPAATAPCLARG*RGDQHG
Trigger: CCCGTGCTGGTCTCCTCTGCAGCCTCGAGCCAGGCA...AGGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTGTTGCCCGGCCGCTTaGGGCCCGGCGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQCCPAA*GPASSG
Trigger: CCCAGAGCTCGCCGGGCCCCAAGCGGCCGGGCAACA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTTCTCGTCCTGCGGGGTaGCCGCACTGTCGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASSRPAG*PHCRRS
Trigger: ACTCCGACGACAGTGCGGCCACCCCGCAGGACGAGA...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCACGGACTGCTCGCTaGCCGAGGAGCACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASARTAR*PRSTCS
Trigger: TGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGC...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACCGCTTGATGAGGTCCTaGACGGCCTCCACCGACTCG +
Preference number: 4 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNRLMRS*TASTDS
Trigger: CGAGTCGGTGGAGGCCGTGCAGGACCTCATCAAGCG...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTGGCCGCCACCTAGGTaGGTCTTCCCCAGAGACGCA +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCWPPPR*VFPRDA
Trigger: TGCGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCA...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATGGGCCCGGCGAGCTCTaGGCCCCGATCATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHGPGEL*APIMWG
Trigger: GCCCCACATGATCGGGGCCCAGAGCTCGCCGGGCCC...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCCAAGACCCAGGTGTCTaGCTGGCTTGGGAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCQDPGV*LAWEAG
Trigger: GCCCGCTTCCCAAGCCAGCCAGACACCTGGGTCTTG...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp GCTCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGACCAAGACTCGAGGTCTaGGATAATGTCGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: APGGPAQPRDAWRGPPAGPRLEV*DNVDGV
Trigger: GACGCCATCGACATTATCTCAGACCTCGAGTCTTGG...TCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCCCGCTCATCCAGGGCTaGCGCAAACGCCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGPLIQG*RKRLPL
Trigger: GAGTGGAAGGCGTTTGCGGCAGCCCTGGATGAGCGG...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCCGCTTGATGAGGTCCTaGACGGCCTCCACCGACTCG +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGRLMRS*TASTDS
Trigger: CGAGTCGGTGGAGGCCGTGCAGGACCTCATCAAGCG...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGTCGAGGACGCCCGTaGTTCTGCCGTTGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPACRGRP*FCRCRP
Trigger: AGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACA...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCTCCTGGAGGGCCAGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAACTGTGATACAGCAATaGGACCTCTGCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: APGGPAQPRDAWRGPPAGTVIQQ*DLCLGQ
Trigger: CTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGT...TCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCTGGCCCTCCAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCAGCCACGGATGCGGGTaGACTGGCGTCATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SVWTCRGRPCFCRCRPAASHGCG*TGVIAG
Trigger: TCCAGCAATGACGCCAGTCCACCCGCATCCGTGGCT...GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTCTAGGACCCTCAGGCTaGCCGACGATGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASLGPSG*PTMRLN
Trigger: GTTCAGCCTCATCGTCGGCCAGCCTGAGGGTCCTAG...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCGACTCGCGATCTGCCTaGTCTGCTGCGAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCDSRSA*SAARHS
Trigger: ACTATGCCTCGCAGCAGATCAGGCAGATCGCGAGTC...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp TCAGTGAGGCTTCCCCATCGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCGCTCCAGGTGCTTGCTaGTCATGGGCGTCACGTGGT +
Preference number: 4 (lower is better)
Translates to: SVRLPHRTTQSRRRPWSAAPGAC*SWASRG
Trigger: ACCACGTGACGCCCATGATCAGCAAGCACCTGGAGC...GGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCGATGGGGAAGCCTCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGGCCGCACGGGGCTGGTaGGCCACTTGCGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVAARGW*ATCAGC
Trigger: ACACCCTGCGCAAGTGGCTCACCAGCCCCGTGCGGC...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp TCAGTGAGGCTTCCCCATCGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCCTGGTCAACAAGGAGTaGGCTGGGGCGATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SVRLPHRTTQSRRRPWSALVNKE*AGAILQ
Trigger: CTGGAGGATCGCCCCAGCTCACTCCTTGTTGACCAG...GGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCGATGGGGAAGCCTCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGCCCTTCCAGGTAATTaGGGCTTTGGGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGALPGN*GFGAAT
Trigger: TGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCCCGCTCATCCAGGGCTaGCGCAAACGCCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPAPLIQG*RKRLPL
Trigger: GAGTGGAAGGCGTTTGCGGCAGCCCTGGATGAGCGG...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCGCCTCGTCCAGCTGCTaGAGCACCGTCTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLASSSC*STVSMW
Trigger: CCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGC...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTCACCTGTTTCACTTCTaGCTGCAGGTGGCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASHLFHF*LQVAQL
Trigger: CAGCTGCGCCACCTGCAGGCAGAAGTGAAACAGGTG...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTGCTCTCGCTGGAGCTaGTCTGCCTCTTGTAACGAG +
Preference number: 4 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSCSRWS*SASCNE
Trigger: CTCGTTACAAGAGGCAGAGCAGCTCCAGCGAGAGCA...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTTCGTATCAGGCTGGCTaGTGCCGTCTCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASSYQAG*CRLLGC
Trigger: ACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGA...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCCAGTCAGGCTTGTCATaGGGCCGCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: SVWTCRGRPCFCRCRPAAQSGLS*GRSRTS
Trigger: GGAAGTTCTGGAGCGGCCGCATGACAAGCCTGACTG...GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGTCGACCGTCTCGTCCTaGGGGGTGGCCGCACTGTCG +
Preference number: 4 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMSTVSS*GVAALS
Trigger: CGACAGTGCGGCCACCCCGCAGGACGAGACGGTCGA...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGTGGAGAGAGTACCGCTaGTCAGGCCCTCGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETWREYR*SGPRSG
Trigger: GCCGGAACGAGGGCCTGAGCAGCGGTACTCTCTCCA...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCCGTGCTTCTGCCGTTaGCGGCCTGCAGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQPCFCR*RPAATA
Trigger: AGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGG...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGGGACGCCCGTGCTTCTaGCGTTGCCGGCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVGRPCF*RCRPAA
Trigger: GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCC...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCCACCCCAGCGCAGCTTaGAGCTCTGTGTCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGHPSAA*SSVSKH
Trigger: GTGCTTGGACACAGAGCTGCAAGCTGCGCTGGGGTG...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCCTACCGTCGAATCCTTaGAGCCGCCCCACGTTCATC +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCLPSNP*SRPTFI
Trigger: GATGAACGTGGGGCGGCTGCAAGGATTCGACGGTAG...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620511.1
CDS-3UTR CCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCGCCGGTCCAGCATGGTaGACACCTTGGGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLAGPAW*TPWARG
Trigger: ACCTCTTGCCCAAGGTGTCCACCATGCTGGACCGGC...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTTCTCCAGCTGCCGCTaGTGGTGCAGCACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPAFSSCR*WCSTSW
Trigger: CCACGAGGTGCTGCACCACCAGCGGCAGCTGGAGAA...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCAAGGCTTTGTCTGCATaGTGCTGGAGGCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSKALSA*CWRRCS
Trigger: AGAGCAGCGCCTCCAGCACCATGCAGACAAAGCCTT...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCCTGCTGCCGTCTCCTTaGCTGTCCAGATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCLLPSP*LSRSSP
Trigger: TGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAG...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTCTGGCCCCGTCGGATaGTCAGCTCGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGSGPVG*SARCCC
Trigger: GCAACAGCAACGAGCTGACCATCCGACGGGGCCAGA...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCCTAGGACCCTCAGGCTaGCCGACGATGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLLGPSG*PTMRLN
Trigger: GTTCAGCCTCATCGTCGGCCAGCCTGAGGGTCCTAG...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGCACAGACGAGGCGCCTaGAAGCTCAGAGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETHRRGA*KLRAEW
Trigger: CCACTCGGCTCTGAGCTTCCAGGCGCCTCGTCTGTG...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTTCTTCAGAAGGGGCTTaGTGGAGTCCCACTTGGACC +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASSSEGA*WSPTWT
Trigger: GGTCCAAGTGGGACTCCATCAAGCCCCTTCTGAAGA...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACTCGAAGTTTCACCTCTaGGCCAGGGATACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNSKFHL*ARDTGW
Trigger: CCAGCCAGTATCCCTGGCTCAGAGGTGAAACTTCGA...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGTTCCTCAATTGCACTaGCGAGCTCGGCTGCACTCG +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGVPQLH*RARLHS
Trigger: CGAGTGCAGCCGAGCTCGTCAGTGCAATTGAGGAAC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCCTTTCCAGGTCACCATaGTCCCATCCATCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCLSRSP*SHPSLD
Trigger: GTCCAGGGATGGATGGGATCATGGTGACCTGGAAAG...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCCAGGGTTCCCGAGGATaGTTTCAGGGGCTGCGAATT +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCQGSRG*FQGLRI
Trigger: AATTCGCAGCCCCTGAAATCATCCTCGGGAACCCTG...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTGCTGCCGTGTCGAGTaGAGCCGGTCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQCCRVE*SRSSMV
Trigger: CACCATGCTGGACCGGCTGCACTCGACACGGCAGCA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GCCCTCAGCTGCGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTTTCAGGGAATCGGAGCTaGCGGGAGTCAAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: ALSCGALVSGGSEHQKHVSGNRS*RESRAA
Trigger: AGCGGCCCTTGACTCCCGGCAGCTCCGATTCCCTGA...AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGCTTTGTCTGCATGGTaGTGGAGGCGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGALSAW*WRRCSA
Trigger: TGCAGAGCAGCGCCTCCAGCACCATGCAGACAAAGC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGGTCAAGGCTTTGTCTaGATGGTGCTGGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGGQGFV*MVLEAL
Trigger: CAGCGCCTCCAGCACCATGCAGACAAAGCCTTGACC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGATGGCTTCTGCCTTCTaGTGCACCTGCAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETMASAF*CTCSAL
Trigger: GAGCGCGCTGCAGGTGCAGCAGAAGGCAGAAGCCAT...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCTATCAGGCTGGCTGCTaGCGTCTCCTTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLYQAGC*RLLGCP
Trigger: TGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATA...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TTGAGAGTCCCGTCCGGGTTCTCCACGATGACTGCACTGGTGTGGCCCAGGACAGCCAGCTTCTTCACGTaGCCGTCGGCCTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LRVPSGFSTMTALVWPRTASFFT*PSALPL
Trigger: CAGCGGCAAGGCCGACGGGCACGTGAAGAAGCTGGC...TGTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGGACGGGACTCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTCACGAGTTCCTCAATTaGACTGACGAGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASHEFLN*TDELGC
Trigger: GCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTG...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTGGCCGAGGAGCACGTaGTCATGCGGTCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGWPRST*SCGQYP
Trigger: AGGATACTGACCGCATGAGCACGTGCTCCTCGGCCA...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTGCTTTCACTCCCGTTaGTCTGGGTGGACTGCACGG +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGCFHSR*SGWTAR
Trigger: CCGTGCAGTCCACCCAGAGCAACGGGAGTGAAAGCA...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCCCGTGGAGGTGTGTGTaGAAAGGTAGAACTCGCCAT +
Preference number: 4 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSPWRCV*KGRTRH
Trigger: ATGGCGAGTTCTACCTTTCCACACACACCTCCACGG...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp ACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTTGGATCGTCCGCTCCTaGATGACTTCGCGGATATGC +
Preference number: 4 (lower is better)
Translates to: TCRGRPCFCRCRPAATAPWIVRS*MTSRIC
Trigger: GCATATCCGCGAAGTCATCCAGGAGCGGACGATCCA...AGGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCGGGCCCGGCGAGCTCTaGGCCCCGATCATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTGPGEL*APIMWG
Trigger: GCCCCACATGATCGGGGCCCAGAGCTCGCCGGGCCC...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCGGGCCCGGCGAGCTCTaGGCCCCGATCATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPGPGEL*APIMWG
Trigger: GCCCCACATGATCGGGGCCCAGAGCTCGCCGGGCCC...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGTCTCGTCCTGCGGGGTaGCCGCACTGTCGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMSRPAG*PHCRRS
Trigger: ACTCCGACGACAGTGCGGCCACCCCGCAGGACGAGA...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGCCGCCGCCCCCGCTGTaGTTCCTCTGGTACTCGATT +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSEPPPPL*FLWYSI
Trigger: AATCGAGTACCAGAGGAACCACAGCGGGGGCGGCGG...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTCCCGTTGCTCTGGGTaGACTGCACGGACTGCTCGC +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQSRCSG*TARTAR
Trigger: GCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCGGGGCACTGGTCAGTaGCGGCTCGGAACACCAGAA +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQRGTGQ*RLGTPE
Trigger: TTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCG...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTATGACTGCACTGGTGTaGCCCAGGACAAAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASMTALV*PRTKPG
Trigger: TCCAGGCTTTGTCCTGGGCCACACCAGTGCAGTCAT...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTCCAGGAGGCGACCCTaGTCAGCCATTTCTAAGACC +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCSRRRP*SAISKT
Trigger: GGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGA...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTGTTCAGGAGCTTTaGTGTGCGTCACCATTCCTG +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASAVQEL*CASPFL
Trigger: CAGGAATGGTGACGCACATCAAAGCTCCTGAACAGC...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTGCTGTTGCAAGCGGTaGAGTCATGGATCACCACTG +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCCCCKR*SHGSPL
Trigger: CAGTGGTGATCCATGACTTCACCGCTTGCAACAGCA...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCACCGGGTTCTCCACGATaGCTGCACTGGTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSPGSPR*LHWCGP
Trigger: TGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGG...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCCTTTCCAGGTCACCATaGTCCCATCCATCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGLSRSP*SHPSLD
Trigger: GTCCAGGGATGGATGGGATCATGGTGACCTGGAAAG...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCCAGGGTTCCCGAGGATaGTTTCAGGGGCTGCGAATT +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLQGSRG*FQGLRI
Trigger: AATTCGCAGCCCCTGAAATCATCCTCGGGAACCCTG...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTCTGCAGGTCCGCATTaGCTGAGCCTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSSAGPH*LSLSSF
Trigger: AAAAGAACTCAGGCTCAGGCAATGCGGACCTGCAGA...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCATCAGGGAATCGGAGCTaGCGGGAGTCAAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSSGNRS*RESRAA
Trigger: AGCGGCCCTTGACTCCCGGCAGCTCCGATTCCCTGA...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCAGTGAGGCTTCCCCATCGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCGATGCAGCCGGACCTTaGGGTGTTGCCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SVRLPHRTTQSRRRPWSADAAGP*GVARCS
Trigger: AGAACATCTGGCAACACCGCAAGGTCCGGCTGCATC...GGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCGATGGGGAAGCCTCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGTGCAGGGTGGTCTGCTaGTGCTGGCCAAAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSECRVVC*CWPKRL
Trigger: CAAGCGCTTTGGCCAGCAGCAGCAGACCACCCTGCA...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGCAGAGTCCCTGAGCTaGTGGATGAGGTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQAESLS*WMRSSP
Trigger: AGGGGAGGACCTCATCCAGCAGCTCAGGGACTCTGC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTGCGCCTCGTCCAGCTaGTGCAGCACCGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQCASSS*CSTVSM
Trigger: CATTGAGACGGTGCTGCAGCAGCTGGACGAGGCGCA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp TCAGTGAGGCTTCCCCATCGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCTGGTGCTGGAGGCGCTaGTCTGCAATCGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: SVRLPHRTTQSRRRPWSAWCWRR*SAIVRS
Trigger: AGATCTCACGATTGCAGAGCAGCGCCTCCAGCACCA...GGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCGATGGGGAAGCCTCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGTGCAGGTGGCGCAGCTaGACGCACTGCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMCRWRS*THCSRC
Trigger: ACACCTGGAGCAGTGCGTGCAGCTGCGCCACCTGCA...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTAGGAATGCCTCCTTCTaGTCCAGGTGCTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASRNASF*SRCLLI
Trigger: GATCAGCAAGCACCTGGAGCAGAAGGAGGCATTCCT...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCAGTGAGGCTTCCCCATCGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCTTCTGGAGTGGGCGATaGACAGTGAACCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: SVRLPHRTTQSRRRPWSAFWSGR*TVNHRG
Trigger: TCCCCTGTGGTTCACTGTGCATCGCCCACTCCAGAA...GGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCGATGGGGAAGCCTCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGTGGAGAGAGTACCGCTaGTCAGGCCCTCGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMWREYR*SGPRSG
Trigger: GCCGGAACGAGGGCCTGAGCAGCGGTACTCTCTCCA...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TCAGTGAGGCTTCCCCATCGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCCACGAGTTCCTCAATTaGACTGACGAGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVRLPHRTTQSRRRPWSAHEFLN*TDELGC
Trigger: GCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTG...GGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCGATGGGGAAGCCTCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGCTCAAAGAGGAAGATaGGCCTCTCTCTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGAQRGR*ASLCSE
Trigger: CTCGCTGCAGAGAGAGGCGCATCTTCCTCTTTGAGC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCGCGTGGCGGGGTGTCTaGCGCTGGAGGGAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPAWRGV*RWRESL
Trigger: CAGCGACTCCCTCCAGCGGCAGACACCCCGCCACGC...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCGTTCTCCACGATGACTaGACTGGTGTGGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPAVLHDD*TGVAQD
Trigger: GTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAAC...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACGATGATTTCAGGGGCTaGGAATTCAGGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNDDFRG*EFRVPQ
Trigger: CTGGGGAACCCTGAATTCGCAGCCCCTGAAATCATC...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGCCGGCCTGCAGCCACTaGTCCTGGAGGGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKPACSH*SWRASA
Trigger: TGCGCTGGCCCTCCAGGAGCAGTGGCTGCAGGCCGG...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAACCGTGCTTCTGCCGTTaGCGGCCTGCAGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQPCFCR*RPAATA
Trigger: AGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGG...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGTGTCGAGGACGCCCGTaGTTCTGCCGTTGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVCRGRP*FCRCRP
Trigger: AGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACA...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGGAGTCAAGGGCCGCTaGAGCTTGTCAAGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQGVKGR*SLSRSD
Trigger: GTCGCTCCTTGACAAGCTCCAGCGGCCCTTGACTCC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTGGTGCAGCACCTCGTaGATGACATCCAGGACATGG +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGWCSTS*MTSRTW
Trigger: CCATGTCCTGGATGTCATCCACGAGGTGCTGCACCA...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCCCGAGGAGGAGGATTTaGAGAGAGTACCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGPRRRI*REYRCS
Trigger: TGAGCAGCGGTACTCTCTCCAAATCCTCCTCCTCGG...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTCGGTGTTTCGGAGCTaGTGGGGCGGACTAATAACC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGSVFRS*WGGLIT
Trigger: GGTTATTAGTCCGCCCCACCAGCTCCGAAACACCGA...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGCCAGCACCTTCATCTTaGGGATCGGCTCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETPAPSS*GSAPLL
Trigger: GAGAAGCGGAGCCGATCCCCAAGATGAAGGTGCTGG...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGCCCAGGACAAAGCCTaGAATCCAGCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQAQDKA*NPALSC
Trigger: GCAGCTGAGGGCTGGATTCCAGGCTTTGTCCTGGGC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGCGGTCTTAGGGATGTaGATGGGCTCCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQAVLGM*MGSFRA
Trigger: AGCCCTGAAGGAGCCCATTCACATCCCTAAGACCGC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCTGTCCAGCGTGTTCTaGGACGTCCGTGAGGCGATG +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHLSSVF*DVREAM
Trigger: CATCGCCTCACGGACGTCTCAGAACACGCTGGACAG...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCGAGTCTTTGTGGTTaGAGATGCCCTCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASASLCG*RCPPFP
Trigger: TGGAAATGGAGGGCATCTTCAACCACAAAGACTCGC...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp ACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTCTGCATCTTGGTCTGTaGCCAAGAATGTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TCRGRPCFCRCRPAATAPLHLGL*PRMCPA
Trigger: TGCAGGACACATTCTTGGTCACAGACCAAGATGCAG...AGGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCAGGGGGTGGACGTACCTaGCATCTTGTCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSGGGRT*HLVCLC
Trigger: GCAGAGGCAGACAAGATGTCAGGTACGTCCACCCCC...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTGTAGTAGGTCGTGTTaGGCTGAACAGCATCTCCAA +
Preference number: 4 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSCSRSC*AEQHLQ
Trigger: TTGGAGATGCTGTTCAGCTCAACACGACCTACTACA...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGTCTTCCCCAGCAGATaGGTCAAAAATGCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASVFPSR*VKNAAK
Trigger: CTTTGCGGCATTTTTGACTCATCTGCTGGGGAAGAC...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCAGGGGAAGGACTCCTaGAGGATCTTCAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQQGKDS*RIFRRG
Trigger: GCCCCTTCTGAAGATCCTGCAGGAGTCCTTCCCCTG...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCATCCAGCAGCTCCTTCTaGAGCTCCTCCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSSSSSF*SSSSHV
Trigger: GACGTGGCTGGAGGAGCTGCAGAAGGAGCTGCTGGA...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTTCCAGCAGCTCCTTCTaGAGCTCCTCCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: APLNEGSQSGRVEDARASSSSSF*SSSSHV
Trigger: GACGTGGCTGGAGGAGCTGCAGAAGGAGCTGCTGGA...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCGCAGCTGCACGCACTaGTCCAGGTGTTTCCGATGC +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHRSCTH*SRCFRC
Trigger: GCATCGGAAACACCTGGAGCAGTGCGTGCAGCTGCG...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTGTTTCACTTCTGCCTaGAGGTGGCGCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQCFTSA*RWRSCT
Trigger: CGTGCAGCTGCGCCACCTGCAGGCAGAAGTGAAACA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTATGGCTTCTGCCTTCTaGTGCACCTGCAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: APLNEGSQSGRVEDARASMASAF*CTCSAL
Trigger: GAGCGCGCTGCAGGTGCAGCAGAAGGCAGAAGCCAT...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGAGGAGCTCCTGGGTGTaGTGTATACTGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQRSSWV*CILEPV
Trigger: CACGGGCTCCAGTATACAGCACACCCAGGAGCTCCT...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGTTCTGGAGTGGGCGATaGACAGTGAACCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETFWSGR*TVNHRG
Trigger: TCCCCTGTGGTTCACTGTGCATCGCCCACTCCAGAA...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGTCGACCGTCTCGTCCTaGGGGGTGGCCGCACTGTCG +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKSTVSS*GVAALS
Trigger: CGACAGTGCGGCCACCCCGCAGGACGAGACGGTCGA...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCCGTTCATCATGTCGTTaGACCGCCTGGGTACTATGC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGRSSCR*TAWVLC
Trigger: GCATAGTACCCAGGCGGTGCAACGACATGATGAACG...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCCGTTCATCATGTCGTTaGACCGCCTGGGTACTATGC +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLRSSCR*TAWVLC
Trigger: GCATAGTACCCAGGCGGTGCAACGACATGATGAACG...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCTGCGGTCAGTATCCTTaGCAGGGGCCGCGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTCGQYP*QGPRGG
Trigger: CCCGCCACGCGGCCCCTGGCAAGGATACTGACCGCA...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTCTCATCCTCCTTCACTaGCGTGTAATCGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASLILLH*RVIVCH
Trigger: GTGACACACGATTACACGGCAGTGAAGGAGGATGAG...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCAAACTTAGTGGCCACTaGTCGCTTGGTTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSKLSGH*SLGSFL
Trigger: CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTT...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGATGATTTCAGGGGCTaGGAATTCAGGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGDDFRG*EFRVPQ
Trigger: CTGGGGAACCCTGAATTCGCAGCCCCTGAAATCATC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp GCTATCCTGCAGTTGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTGCTTGGCGGGGTCCTCCTaGAGGAGGAAGCACACGAAC +
Preference number: 4 (lower is better)
Translates to: AILQLCRYRTASRTSPRCLAGSS*RRKHTN
Trigger: GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAA...GCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCCGGCCTGCAGCCACTaGTCCTGGAGGGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSPACSH*SWRASA
Trigger: TGCGCTGGCCCTCCAGGAGCAGTGGCTGCAGGCCGG...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCACCCCAGCGCAGCTTaGAGCTCTGTGTCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHHPSAA*SSVSKH
Trigger: GTGCTTGGACACAGAGCTGCAAGCTGCGCTGGGGTG...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTCCTGGTGGTGATGAATaGCATCTTCTAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASPGGDE*HLLGPA
Trigger: TGCAGGACCTAGAAGATGCCATTCATCACCACCAGG...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCTCCACACCAGAGGCCTaGACCTCATTGACATACTGC +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLSTPEA*TSLTYC
Trigger: GCAGTATGTCAATGAGGTCCAGGCCTCTGGTGTGGA...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGTCCGTCTCAGAGTTTaGGCCCAGCTTATCCGCCCC +
Preference number: 4 (lower is better)
Translates to: APLNEGSQSGRVEDARASVRLRV*AQLIRP
Trigger: GGGGCGGATAAGCTGGGCCCAAACTCTGAGACGGAC...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCGTGCGTCACCATTCCTaGCATGTTCACGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLVRHHS*HVHAVP
Trigger: AGGAACAGCGTGAACATGCCAGGAATGGTGACGCAC...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCGTATACTGGAGCCCGTaGAGGTGTGTGTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLVYWSP*RCVWKG
Trigger: ACCTTTCCACACACACCTCCACGGGCTCCAGTATAC...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCCTGGATGGCCATGGGTaGCGGCAGGGGCACGGCGTC +
Preference number: 4 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSLDGHG*RQGHGV
Trigger: GACGCCGTGCCCCTGCCGCCACCCATGGCCATCCAG...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCAAGAGCAGTTTACCCTaGGCAACGATTTTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCKSSLP*ATIFPS
Trigger: CGACGGGAAAATCGTTGCCCAGGGTAAACTGCTCTT...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCTGGTGTCGGACAGGCTaGGGGATCCGGGAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSWCRTG*GIREGR
Trigger: CCGGCCCTCCCGGATCCCCCAGCCTGTCCGACACCA...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAACGGGGTGTCTGCCGCTaGAGGGAGTCGCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKRGVCR*RESLSP
Trigger: GGGGGACAGCGACTCCCTCCAGCGGCAGACACCCCG...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGCGGGGCACTGGTCAGTaGCGGCTCGGAACACCAGAA +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVRGTGQ*RLGTPE
Trigger: TTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCG...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCATGACTGCACTGGTGTaGCCCAGGACAAAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPAMTALV*PRTKPG
Trigger: TCCAGGCTTTGTCCTGGGCCACACCAGTGCAGTCAT...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCAGCTCATGGGTGACCTaGTCGCGCTTCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGSSWVT*SRFINF
Trigger: GAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGAGGATGCCAAGCTCATaGGTGACCTGGTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQRMPSS*VTWSRF
Trigger: GAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGCAGCCGAGGGACGCTTaGCGGGGTCCTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEQPRDA*RGPPAG
Trigger: TCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTG...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAACAAGACCCAGGTGTCTaGCTGGCTTGGGAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQQDPGV*LAWEAG
Trigger: GCCCGCTTCCCAAGCCAGCCAGACACCTGGGTCTTG...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGCACTCCTGCTCCAGCTaGCTCGCGATCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVHSCSS*LAICLI
Trigger: GATCAGGCAGATCGCGAGTCAGCTGGAGCAGGAGTG...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGGTTCTGAGACGTCCGTaGGGCGATGGAAATCGTATC +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETVLRRP*GDGNRI
Trigger: GATACGATTTCCATCGCCTCACGGACGTCTCAGAAC...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGCTGTCCAGCGTGTTCTaGGACGTCCGTGAGGCGATG +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVLSSVF*DVREAM
Trigger: CATCGCCTCACGGACGTCTCAGAACACGCTGGACAG...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATGTTCCTCAATTGCACTaGCGAGCTCGGCTGCACTCG +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHVPQLH*RARLHS
Trigger: CGAGTGCAGCCGAGCTCGTCAGTGCAATTGAGGAAC...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCATGCCAAGCTCATGGGTaGCCTGGTCGCGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSCQAHG*PGRASS
Trigger: TGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCA...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCAGGGTTCCCGAGGATaGTTTCAGGGGCTGCGAATT +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQQGSRG*FQGLRI
Trigger: AATTCGCAGCCCCTGAAATCATCCTCGGGAACCCTG...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTGCAATTTCACACGATaGACATACCGGCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCCNFTR*TYRQLI
Trigger: GATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCA...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTGGTGCTGGAGGCGCTaGTCTGCAATCGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQWCWRR*SAIVRS
Trigger: AGATCTCACGATTGCAGAGCAGCGCCTCCAGCACCA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCACCTGTTTCACTTCTaGCTGCAGGTGGCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHHLFHF*LQVAQL
Trigger: CAGCTGCGCCACCTGCAGGCAGAAGTGAAACAGGTG...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGACATGGACTCTCCGTTaGGGATCCAACCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQTWTLR*GSNPAP
Trigger: AGGTGCTGGGTTGGATCCGCAACGGAGAGTCCATGT...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGACATGGACTCTCCGTTaGGGATCCAACCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSETWTLR*GSNPAP
Trigger: AGGTGCTGGGTTGGATCCGCAACGGAGAGTCCATGT...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTCTGCCGCATGGGCATaGCCTTTTTCACAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGSAAWA*PFSQKP
Trigger: TGGCTTTTGTGAAAAAGGGCATGCCCATGCGGCAGA...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TTGAGAGTCCCGTCCGGGTTCTCCACGATGACTGCACTGGTGTGGCCCAGGACATCGTATCAGGCTGGCTaGTGCCGTCTCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRVPSGFSTMTALVWPRTSYQAG*CRLLGC
Trigger: ACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGA...TGTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGGACGGGACTCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCCGGCGTCGGCGCTCTTaGGGACCTCGCGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSRRRRS*GPRGSS
Trigger: AGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCG...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGTGCCTGGCTCGAGGCTaGAGAGGAGACCAGCACGGG +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDECLARG*RGDQHG
Trigger: CCCGTGCTGGTCTCCTCTGCAGCCTCGAGCCAGGCA...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCAGGGCCCTTCCAGGTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAATCCAGCCCTCAGCTaGGGGGCACTGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SGPFQVIEALGRPQTRHLNPALS*GALVSG
Trigger: GCCACTGACCAGTGCCCCGCAGCTGAGGGCTGGATT...TAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGCTATCCTGCAGTTGTaGAGGTACCGGACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQAILQL*RYRTAS
Trigger: GGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGTTGGCGGGGTCCTCCTaGAGGAGGAAGCACACGAAC +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVLAGSS*RRKHTN
Trigger: GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAA...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACCCGGCCTGCAGCCACTaGTCCTGGAGGGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDPACSH*SWRASA
Trigger: TGCGCTGGCCCTCCAGGAGCAGTGGCTGCAGGCCGG...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACTGCCGTTGCCGGCCTaGAGCCACTGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGLPLPA*SHCSWR
Trigger: CCTCCAGGAGCAGTGGCTGCAGGCCGGCAACGGCAG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGAGAAAACTTCGAGGGTaGCCAGAAACCCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETRKLRG*PETQPP
Trigger: AGGAGGCTGGGTTTCTGGGCACCCTCGAAGTTTTCT...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAACGGGCCAGGCCATCTaGCCTGTAGGAAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQTGQAI*PVGNRW
Trigger: CCACCTGTTTCCTACAGGGCAGATGGCCTGGCCCGT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAATGTCGGCCAGGTCCTTaGCCGCCTCCTCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKCRPGP*PPPLPP
Trigger: AGGGGGCAGAGGAGGCGGCCAAGGACCTGGCCGACA...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGCAGCCGGTCCAGCATaGTGGACACCTTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQAAGPA*WTPWAR
Trigger: TCTTGCCCAAGGTGTCCACCATGCTGGACCGGCTGC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCAGAAATGCTTCTCCGTaGTTCTCGATCCAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCRNASP*FSIQSS
Trigger: GCTAGACTGGATCGAGAACCACGGAGAAGCATTTCT...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGTCCGTCTCAGAGTTTaGGCCCAGCTTATCCGCCCC +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQVRLRV*AQLIRP
Trigger: GGGGCGGATAAGCTGGGCCCAAACTCTGAGACGGAC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp TCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCAACTCGCCATTGTCATaGATCCATTCCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SVWTCRGRPCFCRCRPAANSPLS*IHSKAC
Trigger: GCAGGCTTTGGAATGGATCCATGACAATGGCGAGTT...GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGTGGGCCCCGATCATGTaGGGCTGGAGGGAAGCCACG +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKWAPIM*GWREAT
Trigger: CGTGGCTTCCCTCCAGCCCCACATGATCGGGGCCCA...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTGTTGCCCGGCCGCTTaGGGCCCGGCGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICCCPAA*GPASSG
Trigger: CCCAGAGCTCGCCGGGCCCCAAGCGGCCGGGCAACA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTCTTCCATCTCATCAATaGGCGAGGAGGAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASLPSHQ*ARRKRE
Trigger: TTCTCTCTTCCTCCTCGCCCATTGATGAGATGGAAG...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCGAGAAGGGACCGCGCTaGAGAGCGGCGAGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPEKGPR*RAASSA
Trigger: CGCTGAACTCGCCGCTCTCCAGCGCGGTCCCTTCTC...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTTTGCCAGGGGCCGCGTaGCGGGGTGTCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGLPGAA*RGVCRW
Trigger: CCAGCGGCAGACACCCCGCCACGCGGCCCCTGGCAA...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTAACTACGCCAGTTTATaGCTCAAGACCCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASNYASL*LKTQVS
Trigger: AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTT...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGCAGCACCTCGTGGATaGCATCCAGGACATGGTGCA +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQAAPRG*HPGHGA
Trigger: TGCACCATGTCCTGGATGTCATCCACGAGGTGCTGC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCCACAGCTGCAGCCTCTaGTGCAGCCGGACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSHSCSL*CSRTLR
Trigger: CCGCAAGGTCCGGCTGCATCAGAGGCTGCAGCTGTG...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGACCTGCAGCGCGCTCTaGTGTGTTTTCTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQTCSAL*CVFSMA
Trigger: TGCCATTGAGAAAACACATCAGAGCGCGCTGCAGGT...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACGTGGGCGATGCACAGTaGACCACAGGGGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNVGDAQ*TTGDQA
Trigger: GGCCTGGTCCCCTGTGGTTCACTGTGCATCGCCCAC...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATGCCAAGCTCATGGGTaGCCTGGTCGCGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQCQAHG*PGRASS
Trigger: TGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAGCCACGTCGGGCGTaGGATGCACACAGACGAGGC +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTKPRRA*DAHRRG
Trigger: GCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTT...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCAGAAACCCAGCCTCCTTaGGTTGAAAGGACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSETQPP*VERTPH
Trigger: GTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTC...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCATCCAGAGCAACACGGTaGCGTAAAGCGTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSSRATR*RKAFPV
Trigger: CACTGGGAACGCTTTACGTCACCGTGTTGCTCTGGA...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTGCTGCCGTGTCGAGTaGAGCCGGTCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPCCRVE*SRSSMV
Trigger: CACCATGCTGGACCGGCTGCACTCGACACGGCAGCA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCCGCTTGATGAGGTCCTaGACGGCCTCCACCGACTCG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPRLMRS*TASTDS
Trigger: CGAGTCGGTGGAGGCCGTGCAGGACCTCATCAAGCG...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCTCAAAAAGGAAGAGATaGCGTTCTCGACCCTTTCGA +
Preference number: 4 (lower is better)
Translates to: SVWTCRGRPCFCRCRPAASKRKR*RSRPFR
Trigger: TCGAAAGGGTCGAGAACGGCATCTCTTCCTTTTTGA...GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TTGAGAGTCCCGTCCGGGTTCTCCACGATGACTGCACTGGTGTGGCCCAGGACATCGCGGCTCTTCTTGTaGTTGTGCGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRVPSGFSTMTALVWPRTSRLFL*LCASFF
Trigger: GAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGA...TGTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGGACGGGACTCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TTGAGAGTCCCGTCCGGGTTCTCCACGATGACTGCACTGGTGTGGCCCAGGACATCTTCTCCACAGCTCTaGATCCCCGAGGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LRVPSGFSTMTALVWPRTSSPQL*IPEEED
Trigger: ATCCTCCTCCTCGGGGATGCAGAGCTGTGGAGAAGA...TGTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGGACGGGACTCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGACTGACGAGCTCGGCTaGACTCGGTGTTTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVTDELG*TRCFGA
Trigger: AGCTCCGAAACACCGAGTGCAGCCGAGCTCGTCAGT...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATTCCCGTCGAATCCTTaGAGCCGCCCCACGTTCATC +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQFPSNP*SRPTFI
Trigger: GATGAACGTGGGGCGGCTGCAAGGATTCGACGGGAA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTTGCTCTGGGTGGACTaGACGGACTGCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPLLWVD*TDCSLA
Trigger: GGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGAATCCAGCCCTCAGCTaGGGGGCACTGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDENPALS*GALVSG
Trigger: GCCACTGACCAGTGCCCCGCAGCTGAGGGCTGGATT...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGAATCCAGCCCTCAGCTaGGGGGCACTGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKNPALS*GALVSG
Trigger: GCCACTGACCAGTGCCCCGCAGCTGAGGGCTGGATT...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTCAGAGAATCTGCCCCTaGCAAGCTCAGCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: APLNEGSQSGRVEDARASQRICP*QAQPLH
Trigger: GTGAAGTGGCTGAGCTTGGCAGGGGCAGATTCTCTG...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATGGACGCCCGTGCTTCTaGCGTTGCCGGCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNGRPCF*RCRPAA
Trigger: GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCC...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGAGCCGCCTCGCCAGGTaGCCAGAGCAGTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKSRLAR*PEQSLS
Trigger: AGACAGAGACTGCTCTGGGCACCTGGCGAGGCGGCT...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR CCA 90 bp ACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTCCGGAAACGTTAAAATaGGACCTCCACGTTTATCTC +
Preference number: 4 (lower is better)
Translates to: TCRGRPCFCRCRPAATAPPETLK*DLHVYL
Trigger: GAGATAAACGTGGAGGTCCCATTTTAACGTTTCCGG...AGGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCCCTGGTGGTGATGAATaGCATCTTCTAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPAPGGDE*HLLGPA
Trigger: TGCAGGACCTAGAAGATGCCATTCATCACCACCAGG...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATTGGTGCAGCACCTCGTaGATGACATCCAGGACATGG +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHWCSTS*MTSRTW
Trigger: CCATGTCCTGGATGTCATCCACGAGGTGCTGCACCA...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGGTCCGGCATTTAACATaGACTCTCCGTTGCGGATCC +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSEVRHLT*TLRCGS
Trigger: GGATCCGCAACGGAGAGTCCATGTTAAATGCCGGAC...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GCTATCCTGCAGTTGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTGCGAAATCGTATCAGGCTaGCTGCTGCCGTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AILQLCRYRTASRTSPRCEIVSG*LLPSPW
Trigger: CCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTC...GCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACAGGCCTTCTGCCGCTaGGGAGCGGTCAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGQAFCR*GAVSCP
Trigger: CGGACAACTGACCGCTCCCCAGCGGCAGAAGGCCTG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TCAGTGAGGCTTCCCCATCGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCGAGAGCGAGTCTTTGTaGTTGAAGATGCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: SVRLPHRTTQSRRRPWSAESESL*LKMPSI
Trigger: AATGGAGGGCATCTTCAACCACAAAGACTCGCTCTC...GGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCGATGGGGAAGCCTCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACTGGGCCCCGATCATGTaGGGCTGGAGGGAAGCCACG +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNWAPIM*GWREAT
Trigger: CGTGGCTTCCCTCCAGCCCCACATGATCGGGGCCCA...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGCAACAAGGAGTGAGCTaGGGCGATCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVQQGVS*GDPPVP
Trigger: TGGCACTGGAGGATCGCCCCAGCTCACTCCTTGTTG...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTGGTGTCGGACAGGCTaGGGGATCCGGGAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICWCRTG*GIREGR
Trigger: CCGGCCCTCCCGGATCCCCCAGCCTGTCCGACACCA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGTCCCGTTGCTCTGGGTaGACTGCACGGACTGCTCGC +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLSRCSG*TARTAR
Trigger: GCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGA...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGCGTGACCTCACTCAATaGAATGACGAATTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETRDLTQ*NDEFWG
Trigger: CCCCCAGAATTCGTCATTCCATTGAGTGAGGTCACG...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACACAGCCGAGGGACGCTTaGCGGGGTCCTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTQPRDA*RGPPAG
Trigger: TCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTG...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGGGTCGAACATCATTCTaGTGTTTGCGCCGCTCAATG +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETGRTSF*CLRRSM
Trigger: CATTGAGCGGCGCAAACACCAGAATGATGTTCGACC...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGACAAGGCCATGGGAGTaGCCGCCACCTAGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDETRPWE*PPPRCV
Trigger: GACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGT...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGAAGCTCAGAGCCGAGTaGTCTCTGAGTCCTAGACAA +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETKLRAE*SLSPRQ
Trigger: TTGTCTAGGACTCAGAGACCACTCGGCTCTGAGCTT...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGCACAGACGAGGCGCCTaGAAGCTCAGAGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKHRRGA*KLRAEW
Trigger: CCACTCGGCTCTGAGCTTCCAGGCGCCTCGTCTGTG...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGATTGGCCACCGACATaGTGCGGTTTATATTTACAT +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASDWPPT*CGLYLH
Trigger: ATGTAAATATAAACCGCATCATGTCGGTGGCCAATC...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATAATGCTCTGGCCCGATaGAGAGATTTCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHNALAR*RDFPTP
Trigger: AGGTGTGGGGAAATCTCTTCATCGGGCCAGAGCATT...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGTCTTTCACATGGGTGTaGAAGGACACTGACATGTCC +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETSFTWV*KDTDMS
Trigger: GGACATGTCAGTGTCCTTTCACACCCATGTGAAAGA...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGGCCTTGTCATCCTGTaGGTCTGGCTGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEGLVIL*VWLEEA
Trigger: AGCCTCCTCCAGCCAGACTCACAGGATGACAAGGCC...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGGCCTTGTCATCCTGTaGGTCTGGCTGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLGLVIL*VWLEEA
Trigger: AGCCTCCTCCAGCCAGACTCACAGGATGACAAGGCC...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCAATTATCCGAAGGGTTaGAGGAAGGGCTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLNYPKG*RKGCYY
Trigger: ATAGTAGCAGCCCTTCCTTCAACCCTTCGGATAATT...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCGGTATCAATGTATTCTaGGACAATGTGCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSGINVF*DNVLRL
Trigger: AAGTCTGAGCACATTGTCTCAGAATACATTGATACC...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGGCCCTTCCAGGTAATTaGGGCTTTGGGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKALPGN*GFGAAT
Trigger: TGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGC...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTGAACCCATGTCATTaGCAGCGATGCACGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQLNPCH*QRCTCR
Trigger: TCTACACGTGCATCGCTGTCAATGACATGGGTTCAG...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCAGTGTCCAAGCACTGCTaGGCACAGCTCACTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSVSKHC*AQLTWN
Trigger: ATTCCAAGTGAGCTGTGCTCAGCAGTGCTTGGACAC...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAATGGGCAGAGTGTAAGTaGCGGTCCTCCACCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKWAECK*RSSTPA
Trigger: CGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCA...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAAAGCCACGTCGGGCGTaGGATGCACACAGACGAGGC +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKKPRRA*DAHRRG
Trigger: GCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTT...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCTGCTGCTTTCACTCTaGCATCTTGTCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHLLLSL*HLVCLC
Trigger: GCAGAGGCAGACAAGATGTCAGAGTGAAAGCAGCAG...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGATGCTGCCGTGTCGAGTaGAGCCGGTCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGCCRVE*SRSSMV
Trigger: CACCATGCTGGACCGGCTGCACTCGACACGGCAGCA...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTTCAGGGAATCGGAGCTaGCGGGAGTCAAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSSGNRS*RESRAA
Trigger: AGCGGCCCTTGACTCCCGGCAGCTCCGATTCCCTGA...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGAGCTGCCGCTGGTGGTaGAGCACCTCGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLSCRWW*STSWMT
Trigger: TGTCATCCACGAGGTGCTGCACCACCAGCGGCAGCT...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCCTCGTCCAGCTGCTaGAGCACCGTCTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEASSSC*STVSMW
Trigger: CCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGC...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCCTCGTCCAGCTGCTaGAGCACCGTCTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLASSSC*STVSMW
Trigger: CCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGC...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGTCCTGGACCCGAGTTaGCATGTCTACATCTCTATC +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQVLDPS*HVYISI
Trigger: GATAGAGATGTAGACATGGCAACTCGGGTCCAGGAC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCTGCAGGTGGCGCAGCTaGACGCACTGCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSCRWRS*THCSRC
Trigger: ACACCTGGAGCAGTGCGTGCAGCTGCGCCACCTGCA...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGTGCTCTCGCTGGAGCTaGTCTGCCTCTTGTAACGAG +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVCSRWS*SASCNE
Trigger: CTCGTTACAAGAGGCAGAGCAGCTCCAGCGAGAGCA...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGTCCTCCGAGCAAGGGTaGAAGCCTTCAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVSSEQG*KPSGMP
Trigger: AGGCATTCCTGAAGGCTTGCACCCTTGCTCGGAGGA...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACCTCTTTGGTTTGCTTTaGAGTTATCTGGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNLFGLL*SYLELL
Trigger: GAGGAGTTCCAGATAACTGCAAAGCAAACCAAAGAG...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCCGGCGTCGGCGCTCTTaGGGACCTCGCGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICRRRRS*GPRGSS
Trigger: AGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCG...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTTCGTCGGAGTCCTTCTaGGAGCCGGCGTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSSSESF*EPASAL
Trigger: GAGCGCCGACGCCGGCTCGCAGAAGGACTCCGACGA...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGCCTCCAGTGCCATCTTaGTTTTCACGAGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETPPVPS*FSRVPQ
Trigger: TTGAGGAACTCGTGAAAAGCAAGATGGCACTGGAGG...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTATCTTCTTTCATAAGTaGCATGTAGCCCTCAACCAC +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASIFFHK*HVALNH
Trigger: GTGGTTGAGGGCTACATGGCACTTATGAAAGAAGAT...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTGTTGCTACTGCTGCTaGTTTCACTCCCGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQCCYCC*FHSRCS
Trigger: AGAGCAACGGGAGTGAAAGCAGCAGCAGTAGCAACA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCATCCTCCTTCACTaGCGTGTAATCGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQLILLH*RVIVCH
Trigger: GTGACACACGATTACACGGCAGTGAAGGAGGATGAG...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCACATGTTCTGCTGGTTaGTGGCCAGAATTTGAACGA +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGTCSAG*WPEFER
Trigger: TCGTTCAAATTCTGGCCAGCAACCAGCAGAACATGT...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTAATCCAGCCCTCAGCTaGGGGGCACTGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSNPALS*GALVSG
Trigger: GCCACTGACCAGTGCCCCGCAGCTGAGGGCTGGATT...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGGGTGCTGGAGGCTCTaGAGGATGCCAAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEGCWRL*RMPSSW
Trigger: CCATGAGCTTGGCATCCTGCAGAGCCTCCAGCACCC...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGCTATCCTGCAGTTGTaGAGGTACCGGACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQAILQL*RYRTAS
Trigger: GGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCTTGGCGGGGTCCTCCTaGAGGAGGAAGCACACGAAC +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTLAGSS*RRKHTN
Trigger: GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAA...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTCTGCCGTTGCCGGCCTaGAGCCACTGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSLPLPA*SHCSWR
Trigger: CCTCCAGGAGCAGTGGCTGCAGGCCGGCAACGGCAG...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTCTGCCGTTGCCGGCCTaGAGCCACTGCTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGLPLPA*SHCSWR
Trigger: CCTCCAGGAGCAGTGGCTGCAGGCCGGCAACGGCAG...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGCATGGTGGACACCTTaGGCAAGAGGTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQAWWTP*ARGSAG
Trigger: ACCTGCAGAACCTCTTGCCCAAGGTGTCCACCATGC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGGAGTCAAGGGCCGCTaGAGCTTGTCAAGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEGVKGR*SLSRSD
Trigger: GTCGCTCCTTGACAAGCTCCAGCGGCCCTTGACTCC...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCGGAGTCAAGGGCCGCTaGAGCTTGTCAAGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPGVKGR*SLSRSD
Trigger: GTCGCTCCTTGACAAGCTCCAGCGGCCCTTGACTCC...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCTCCAGCTGCCGCTGGTaGTGCAGCACCTCGTGGATG +
Preference number: 4 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSSSCRW*CSTSWM
Trigger: CATCCACGAGGTGCTGCACCACCAGCGGCAGCTGGA...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACACTTCTGCCTGCAGGTaGCGCAGCTGCACGCACTGC +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNTSACR*RSCTHC
Trigger: GCAGTGCGTGCAGCTGCGCCACCTGCAGGCAGAAGT...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGGGTTGGCCTGTAGCATaGCTTCTGCCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVGWPVA*LLPSAA
Trigger: TGCAGCAGAAGGCAGAAGCCATGCTACAGGCCAACC...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCACCCTGTTCTCCCGTTaGAAGAGTTCATTCAAGATA +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCTLFSR*KSSFKI
Trigger: TATCTTGAATGAACTCTTCCAACGGGAGAACAGGGT...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCAGTATACTGGAGCCCGTaGAGGTGTGTGTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSVYWSP*RCVWKG
Trigger: ACCTTTCCACACACACCTCCACGGGCTCCAGTATAC...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGATGCTACTTCTGGAGTaGGCGATGCACAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQMLLLE*AMHSEP
Trigger: TGGTTCACTGTGCATCGCCCACTCCAGAAGTAGCAT...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACGGATGCGGGTGGACTaGCGTCATTGCTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGRMRVD*RHCWRR
Trigger: CCGTCTCCAGCAATGACGCCAGTCCACCCGCATCCG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCCGGATGCGGGTGGACTaGCGTCATTGCTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSRMRVD*RHCWRR
Trigger: CCGTCTCCAGCAATGACGCCAGTCCACCCGCATCCG...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTGGTGTCGGACAGGCTaGGGGATCCGGGAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADWCRTG*GIREGR
Trigger: CCGGCCCTCCCGGATCCCCCAGCCTGTCCGACACCA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTTGTCTGCCTCTGCCTaGCTCGAGGCTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPLSASA*LEAAEE
Trigger: CTCCTCTGCAGCCTCGAGCCAGGCAGAGGCAGACAA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGGGGAGGGCCCGGGGGTaGACGTACCTGACATCTTGT +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGGRARG*TYLTSC
Trigger: ACAAGATGTCAGGTACGTCCACCCCCGGGCCCTCCC...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATCGGGGGAGGCGGGGATaGAGCTCCAGAAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADRGRRG*SSRRSP
Trigger: GGGGCTCCTTCTGGAGCTCCATCCCCGCCTCCCCCG...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTAGACCAGGATGTAGCTaGTGGGGGTCTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: APLNEGSQSGRVEDARASRPGCS*WGSQRC
Trigger: ACACCTTTGAGACCCCCACCAGCTACATCCTGGTCT...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGTGTCCACGATCACCGTaGAGCCACGCTTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDECPRSP*SHACRP
Trigger: AGGTCTGCAAGCGTGGCTTCACGGTGATCGTGGACA...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTCACAGCTGCAGCCTCTaGTGCAGCCGGACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSHSCSL*CSRTLR
Trigger: CCGCAAGGTCCGGCTGCATCAGAGGCTGCAGCTGTG...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGGCTGCAGACCTGCTCTaGGGTTTTGTAGAAAGCGAC +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVAADLL*GFVESD
Trigger: GTCGCTTTCTACAAAACCTCAGAGCAGGTCTGCAGC...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGCTGCAGACCTGCTCTaGGGTTTTGTAGAAAGCGAC +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQAADLL*GFVESD
Trigger: GTCGCTTTCTACAAAACCTCAGAGCAGGTCTGCAGC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCGGTCTTAGGGATGTaGATGGGCTCCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLAVLGM*MGSFRA
Trigger: AGCCCTGAAGGAGCCCATTCACATCCCTAAGACCGC...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TTGAGAGTCCCGTCCGGGTTCTCCACGATGACTGCACTGGTGTGGCCCAGGACAGCGAGTCTTTGTGGTTaGAGATGCCCTCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: LRVPSGFSTMTALVWPRTASLCG*RCPPFP
Trigger: TGGAAATGGAGGGCATCTTCAACCACAAAGACTCGC...TGTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGGACGGGACTCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCTGGTCAACAAGGAGTaGGCTGGGGCGATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSLVNKE*AGAILQ
Trigger: CTGGAGGATCGCCCCAGCTCACTCCTTGTTGACCAG...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCGGTATCAATGTATTCTaGGACAATGTGCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCGINVF*DNVLRL
Trigger: AAGTCTGAGCACATTGTCTCAGAATACATTGATACC...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTCCTTCAGTAACAGCTaGTACTTCATGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGSFSNS*YFMILC
Trigger: GCAGAGAATCATGAAGTATCAGCTGTTACTGAAGGA...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGACACTTGGACTAGATaGATGCAAAATGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGDTWTR*MQNEGL
Trigger: GAGACCTTCATTTTGCATTCATCTAGTCCAAGTGTC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTGGGGGTGGACGTACCTaGCATCTTGTCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSGGGRT*HLVCLC
Trigger: GCAGAGGCAGACAAGATGTCAGGTACGTCCACCCCC...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACCCGGGTTCTCCACGATaGCTGCACTGGTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDPGSPR*LHWCGP
Trigger: TGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGG...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GCTATCCTGCAGTTGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTGCCCTCACTCAATGGAATaGCGAATTCTGGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: AILQLCRYRTASRTSPRCPHSME*RILGER
Trigger: ACGTTCCCCCAGAATTCGTCATTCCATTGAGTGAGG...GCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TCAGGGCCCTTCCAGGTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTACTTTCCAGGTCACCATaGTCCCATCCATCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SGPFQVIEALGRPQTRHLLSRSP*SHPSLD
Trigger: GTCCAGGGATGGATGGGATCATGGTGACCTGGAAAG...TAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCGAGCCGAGTGGTCTCTaGGTCCTAGACAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTEPSGL*VLDKAM
Trigger: CATGGCCTTGTCTAGGACTCAGAGACCACTCGGCTC...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTTACAGTATTTTCATCTaGCTGTGTACTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASYSIFI*LCTAPQ
Trigger: TTGTGGAGCAGTACACAGTCAGATGAAAATACTGTA...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCAGACGGCAGCATGAGTaGTGGGCCAAACGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSRRQHE*WAKRGQ
Trigger: CTGGCCTCGTTTGGCCCATCACTCATGCTGCCGTCT...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCGCAGAGTCCCTGAGCTaGTGGATGAGGTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSAESLS*WMRSSP
Trigger: AGGGGAGGACCTCATCCAGCAGCTCAGGGACTCTGC...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGAGGTGTTTCCGATGCTaGTCTGCGGCTAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQRCFRC*SAAKSN
Trigger: ATTGGATTTAGCCGCAGAGCAGCATCGGAAACACCT...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATCCAGGTGTTTCCGATaGTGCTCTGCGGCTAAATCC +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQSRCFR*CSAAKS
Trigger: GGATTTAGCCGCAGAGCAGCATCGGAAACACCTGGA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCCACCTGTTTCACTTCTaGCTGCAGGTGGCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPHLFHF*LQVAQL
Trigger: CAGCTGCGCCACCTGCAGGCAGAAGTGAAACAGGTG...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCATTTCAGGAAGACGTCTaGATTCCTCCGAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSFQEDV*IPPSKG
Trigger: ACCCTTGCTCGGAGGAATGCAGACGTCTTCCTGAAA...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGTTTCAGGAAGACGTCTaGATTCCTCCGAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMFQEDV*IPPSKG
Trigger: ACCCTTGCTCGGAGGAATGCAGACGTCTTCCTGAAA...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTTCAGGAGCTTTGATGTaGGTCACCATTCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: APLNEGSQSGRVEDARASSGALM*VTIPGM
Trigger: CATGCCAGGAATGGTGACGCACATCAAAGCTCCTGA...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCCCTCAGCTGCGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTTATCCATTCCAAAGCCTaGTTGGCACTCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ALSCGALVSGGSEHQKHVIHSKA*LALLSK
Trigger: CTTTGAGAGGAGTGCCAAGCAGGCTTTGGAATGGAT...AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGTATCAGGCTGGCTGCTaGCGTCTCCTTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLYQAGC*RLLGCP
Trigger: TGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATA...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGGCGAGGCAGAAGTCCTaGATCTTGGTCTGTGACCAA +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVARQKS*ILVCDQ
Trigger: TTGGTCACAGACCAAGATGCAGGACTTCTGCCTCGC...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGGTTCTCCACGATGACTaGACTGGTGTGGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKVLHDD*TGVAQD
Trigger: GTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAAC...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAGGACGCCCGTGCTTCTaGCGTTGCCGGCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKGRPCF*RCRPAA
Trigger: GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCC...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTTGTCGAGGACGCCCGTaGTTCTGCCGTTGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGCRGRP*FCRCRP
Trigger: AGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACA...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGCAGCAATGCGACCTCTaGCTTGGGCAGAGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVQQCDL*LGQSVS
Trigger: ACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTG...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAACAGCAATGCGACCTCTaGCTTGGGCAGAGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQQQCDL*LGQSVS
Trigger: ACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTG...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAACCACACCAGTGCGAATaGTGCCACAGTGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKPHQCE*CHSDSG
Trigger: GCCCGAGTCACTGTGGCAGCATTCGCACTGGTGTGG...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAGGCCCCAGCCTGCACTaGAGAGCCGCCTCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKGPSLH*RAASPG
Trigger: ACCTGGCGAGGCGGCTCTGCAGTGCAGGCTGGGGCC...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGCTGCTTTCACTGCATaGCTTCAGGAAAGTGTTACG +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQAAFTA*LQESVT
Trigger: CGTAACACTTTCCTGAAGGCATGCAGTGAAAGCAGC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTGGAGATGTTGCTACTaGTGCTGCTTTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQWRCCY*CCFHCM
Trigger: CATGCAGTGAAAGCAGCAGCAGTAGCAACATCTCCA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAGCCGGTCCAGCATGGTaGACACCTTGGGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKAGPAW*TPWARG
Trigger: ACCTCTTGCCCAAGGTGTCCACCATGCTGGACCGGC...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACGCAGCCGGTCCAGCATaGTGGACACCTTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNAAGPA*WTPWAR
Trigger: TCTTGCCCAAGGTGTCCACCATGCTGGACCGGCTGC...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGGTGGTCTGCTGCTGCTaGCCAAAGCGCTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKVVCCC*PKRLMR
Trigger: CCTCATCAAGCGCTTTGGCCAGCAGCAGCAGACCAC...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCAAGTCAAGTTGTTCATaGTCAAGGCTTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCKSSCS*SRLCLH
Trigger: ATGCAGACAAAGCCTTGACCATGAACAACTTGACTT...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGGCCGTCTCTTCCTCATaGTCCAGTAATGCAATACCC +
Preference number: 4 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMAVSSS*SSNAIP
Trigger: GGGTATTGCATTACTGGACCATGAGGAAGAGACGGC...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAACCGTGGAGGTGTGTGTaGAAAGGTAGAACTCGCCAT +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQPWRCV*KGRTRH
Trigger: ATGGCGAGTTCTACCTTTCCACACACACCTCCACGG...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCGGGTGTGCTGTATACTaGAGCCCGTGGAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTGCAVY*SPWRCV
Trigger: CACACACCTCCACGGGCTCCAGTATACAGCACACCC...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TCAGTGAGGCTTCCCCATCGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCAGGAAGAAATGGAATTaGCTAATCCATGTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SVRLPHRTTQSRRRPWSARKKWN*LIHVAA
Trigger: AGCAGCGACATGGATTAGCCAATTCCATTTCTTCCT...GGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCGATGGGGAAGCCTCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGGGCTCCCTTCAGGTaGATCGTCCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGRAPFR*IVRSWM
Trigger: CATCCAGGAGCGGACGATCCACCTGAAGGGAGCCCT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCACGGATGCGGGTaGACTGGCGTCATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGSHGCG*TGVIAG
Trigger: TCCAGCAATGACGCCAGTCCACCCGCATCCGTGGCT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACTGGATGGCCATGGGTaGCGGCAGGGGCACGGCGTC +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKLDGHG*RQGHGV
Trigger: GACGCCGTGCCCCTGCCGCCACCCATGGCCATCCAG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAGCTGCTGGATGGCCATaGGTGGCGGCAGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKAAGWP*VAAGAR
Trigger: CCGTGCCCCTGCCGCCACCCATGGCCATCCAGCAGC...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGTCCTGTGAGTCTGGCTaGAGGAGGCTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGSCESG*RRLCCW
Trigger: CCAGCAGCACAGCCTCCTCCAGCCAGACTCACAGGA...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACTCCTGTGAGTCTGGCTaGAGGAGGCTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNSCESG*RRLCCW
Trigger: CCAGCAGCACAGCCTCCTCCAGCCAGACTCACAGGA...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGCTGCTACTATCTCCCTaGTCAACAAGGAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMLLLSP*STRSEL
Trigger: CAGCTCACTCCTTGTTGACCAGGGAGATAGTAGCAG...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACTTGGCGGGGGCGTCTaGGCTCGACCCCGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKLGGGV*ARPRGV
Trigger: AACGCCTCGGGGTCGAGCCCAGACGCCCCCGCCAAG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCTCACTCCCGTTGCTCTaGGTGGACTGCACGGACTGC +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSSLPLL*VDCTDC
Trigger: GCAGTCCGTGCAGTCCACCCAGAGCAACGGGAGTGA...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GCCCTCAGCTGCGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTTTGTTCTGCTGGTTGCTaGCCAGAATTTGAACGACCT +
Preference number: 4 (lower is better)
Translates to: ALSCGALVSGGSEHQKHVCSAGC*PEFERP
Trigger: AGGTCGTTCAAATTCTGGCCAGCAACCAGCAGAACA...AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAGCCCAGGACAAAGCCTaGAATCCAGCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKAQDKA*NPALSC
Trigger: GCAGCTGAGGGCTGGATTCCAGGCTTTGTCCTGGGC...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGGCCCAGGACAAAGCCTaGAATCCAGCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGAQDKA*NPALSC
Trigger: GCAGCTGAGGGCTGGATTCCAGGCTTTGTCCTGGGC...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGTGGCCACTGCTCGCTTaGTTCCTTTCTGATCACATT +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSEWPLLA*FLSDHI
Trigger: AATGTGATCAGAAAGGAACCAAGCGAGCAGTGGCCA...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGGTCTCTTTGAACCGATaGCACAGGGCTACGACCCTA +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVVSLNR*HRATTL
Trigger: TAGGGTCGTAGCCCTGTGCCATCGGTTCAAAGAGAC...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
3UTR CAA 72 bp TTCTCAGGCTTTAGGTCCAGGTGTGCTATCCTGCAGTaGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FSGFRSRCAILQ*CRYRTASRTSP
Trigger: GGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGCACACCTGGACCTAAAGCCTGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGCTGCTCTGTATCCTCTaGAGCAGCTTCTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLLLCIL*SSFCPS
Trigger: GGAGGGACAGAAGCTGCTTCAGAGGATACAGAGCAG...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCGACTCGCGATCTGCCTaGTCTGCTGCGAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSDSRSA*SAARHS
Trigger: ACTATGCCTCGCAGCAGATCAGGCAGATCGCGAGTC...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGGAAGAGCTCCAGCTTaGTCTTGCGCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEGRAPA*SCAPGR
Trigger: TCTTCCAGGAGCGCAAGATCAAGCTGGAGCTCTTCC...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGTCGAAGTTTCACCTCTaGGCCAGGGATACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKSKFHL*ARDTGW
Trigger: CCAGCCAGTATCCCTGGCTCAGAGGTGAAACTTCGA...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGACAATTTTATTATCTaGAGTTGGTGTTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGDNFII*SWCSPH
Trigger: GTGGGGAGAACACCAACTTCAGATAATAAAATTGTC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCGACAATTTTATTATCTaGAGTTGGTGTTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLDNFII*SWCSPH
Trigger: GTGGGGAGAACACCAACTTCAGATAATAAAATTGTC...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGGCTGAGTCCTTCCCGTaGCTTCCGATAACCGTTCTC +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKAESFP*LPITVL
Trigger: GAGAACGGTTATCGGAAGTCACGGGAAGGACTCAGC...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGCCTCACTCAATGGAATaGCGAATTCTGGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVPHSME*RILGER
Trigger: ACGTTCCCCCAGAATTCGTCATTCCATTGAGTGAGG...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCTGCCAAGCTCATGGGTaGCCTGGTCGCGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSCQAHG*PGRASS
Trigger: TGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCA...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCACAAAGTCAGCCAGTTTaGTGGTTGGCTTGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSQSQPV*WLAWLN
Trigger: GTTTAGCCAAGCCAACCATCAAACTGGCTGACTTTG...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGGAACATACCGGCAGCTaGTCAGTTATGTTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSEEHTGS*SVMFAC
Trigger: ACAAGCAAACATAACTGATCAGCTGCCGGTATGTTC...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATTGCAATTTCACACGATaGACATACCGGCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHCNFTR*TYRQLI
Trigger: GATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCA...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGGGCAGGACCCAACCTaGTGTCTTCATGTGATGGGA +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEGQDPT*CLHVMG
Trigger: TCCCATCACATGAAGACATCAGGTTGGGTCCTGCCC...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGTACTGCTCCACAATCTaGTTGACGGCTTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEYCSTI*LTAWGR
Trigger: CCTGCCCCAAGCCGTCAATCAGATTGTGGAGCAGTA...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTACAGTATTTTCATCTaGCTGTGTACTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGYSIFI*LCTAPQ
Trigger: TTGTGGAGCAGTACACAGTCAGATGAAAATACTGTA...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAACACGAAAAGTCTCTTTaGACCGATGGCACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQHEKSL*TDGTGL
Trigger: TAGCCCTGTGCCATCGGTTCAAAGAGACTTTTCGTG...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCGAATGCTGCCACAGTaGCTCGGGCATTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSRMLPQ*LGHWVP
Trigger: TGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCG...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGCCAGCCTCCTTGAGTTaGAAGGACTCCCCACACCAG +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGPASLS*KDSPHQ
Trigger: CTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGG...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACCAGCCTCCTTGAGTTaGAAGGACTCCCCACACCAG +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGPASLS*KDSPHQ
Trigger: CTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAACTTGAGACGGCAGCATaGGTGATGGGCCAAACGAGG +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKLETAA*VMGQTR
Trigger: CCTCGTTTGGCCCATCACTCATGCTGCCGTCTCAAG...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGTCTGCAGGTCCGCATTaGCTGAGCCTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVSAGPH*LSLSSF
Trigger: AAAAGAACTCAGGCTCAGGCAATGCGGACCTGCAGA...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATAGTAGGATCTTTCGCTaGTCAACACGCCGAACGAAA +
Preference number: 4 (lower is better)
Translates to: VLEALQDAKLMGDLVALHSRIFR*STRRTK
Trigger: TTTCGTTCGGCGTGTTGAGCAGCGAAAGATCCTACT...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAAGGGTGGTCTGCTGCTaGTGGCCAAAGCGCTTGATG +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKRVVCC*WPKRLM
Trigger: CATCAAGCGCTTTGGCCAGCAGCAGCAGACCACCCT...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCATACTGCAGAAGATCTTaGCCTTGGTGGATGACGTCA +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSYCRRS*PWWMTS
Trigger: TGACGTCATCCACCAAGGGCAAGATCTTCTGCAGTA...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TTGAGAGTCCCGTCCGGGTTCTCCACGATGACTGCACTGGTGTGGCCCAGGACATACTGCAGAAGATCTTaGCCTTGGTGGATGACGTCA +
Preference number: 4 (lower is better)
Translates to: LRVPSGFSTMTALVWPRTYCRRS*PWWMTS
Trigger: TGACGTCATCCACCAAGGGCAAGATCTTCTGCAGTA...TGTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGGACGGGACTCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAATGTTTCACTTCTGCCTaGAGGTGGCGCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKCFTSA*RWRSCT
Trigger: CGTGCAGCTGCGCCACCTGCAGGCAGAAGTGAAACA...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCACATGGACTCTCCGTTaGGGATCCAACCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPTWTLR*GSNPAP
Trigger: AGGTGCTGGGTTGGATCCGCAACGGAGAGTCCATGT...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTGCTCTCGCTGGAGCTaGTCTGCCTCTTGTAACGAG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPCSRWS*SASCNE
Trigger: CTCGTTACAAGAGGCAGAGCAGCTCCAGCGAGAGCA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCATGGCATGCTGGAACTaGTCGTGCTCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSMACWN*SCSRWS
Trigger: GCTCCAGCGAGAGCACGAGCAGTTCCAGCATGCCAT...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGGGCTCTCGAGGACGCTaGAGACCTGCTCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGGSRGR*RPALRF
Trigger: AAACCTCAGAGCAGGTCTGCAGCGTCCTCGAGAGCC...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCCATCTGAAACTTGTCTaGCCAAGTAACAAAACAATG +
Preference number: 4 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCHLKLV*PSNKTM
Trigger: CATTGTTTTGTTACTTGGGCAGACAAGTTTCAGATG...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GCCCTCAGCTGCGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTTATGACTTCGCGGATATaGTTTATCCAGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALSCGALVSGGSEHQKHVMTSRI*FIQSCL
Trigger: CAAGCAGGACTGGATAAAGCATATCCGCGAAGTCAT...AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAACAGTCAGGCTTGTCATaGGGCCGCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKQSGLS*GRSRTS
Trigger: GGAAGTTCTGGAGCGGCCGCATGACAAGCCTGACTG...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACGGCGTCGGCGCTCTTaGGGACCTCGCGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKRRRRS*GPRGSS
Trigger: AGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGATGGAGAGAGTACCGCTaGTCAGGCCCTCGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRWREYR*SGPRSG
Trigger: GCCGGAACGAGGGCCTGAGCAGCGGTACTCTCTCCA...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTCTTCTCCACAGCTCTaGATCCCCGAGGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPSSPQL*IPEEED
Trigger: ATCCTCCTCCTCGGGGATGCAGAGCTGTGGAGAAGA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGCACGAGTTCCTCAATTaGACTGACGAGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLHEFLN*TDELGC
Trigger: GCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTG...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCATCTTCTTTCATAAGTaGCATGTAGCCCTCAACCAC +
Preference number: 4 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPAIFFHK*HVALNH
Trigger: GTGGTTGAGGGCTACATGGCACTTATGAAAGAAGAT...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGTTCCCGTCGAATCCTTaGAGCCGCCCCACGTTCATC +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGFPSNP*SRPTFI
Trigger: GATGAACGTGGGGCGGCTGCAAGGATTCGACGGGAA...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTAGATGCGCCTCTCTCTaGAGCGAGGCAGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSRCASL*SEAEVL
Trigger: CAGGACTTCTGCCTCGCTGCAGAGAGAGGCGCATCT...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGTCATGGATCCAAGTTTaGCGGACACTTGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSESWIQV*RTLGLD
Trigger: ATCTAGTCCAAGTGTCCGGCAAACTTGGATCCATGA...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACATCTTGTCTGCCTCTaGCTGGCTCGAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGHLVCL*LARGCR
Trigger: TCTGCAGCCTCGAGCCAGGCAGAGGCAGACAAGATG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCGTTCTCCACGATGACTaGACTGGTGTGGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSVLHDD*TGVAQD
Trigger: GTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAAC...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGCCGTGCTTCTGCCGTTaGCGGCCTGCAGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVPCFCR*RPAATA
Trigger: AGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGG...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCGGCAGAAGCCTGCTCTaGAGAAAGTTTTTAATGCTA +
Preference number: 4 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPAGRSLL*RKFLML
Trigger: TAGCATTAAAAACTTTCTGCAGAGCAGGCTTCTGCC...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTTGGCCGCCACCTAGGTaGGTCTTCCCCAGAGACGCA +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSWPPPR*VFPRDA
Trigger: TGCGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCA...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTACGTCGGGCGTGAGATaGACACAGACGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGTSGVR*TQTRRL
Trigger: CAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGAAGTTTGAGGTTGAATaGACGTTTCAGAAGCCACGT +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETKFEVE*TFQKPR
Trigger: ACGTGGCTTCTGAAACGTGCATTCAACCTCAAACTT...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCGACTCCCCACACCAGTaGGAATGCTGCCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSDSPHQ*ECCHSD
Trigger: GTCACTGTGGCAGCATTCGCACTGGTGTGGGGAGTC...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGTGGCATGAGGGTGGCTaGTCCCAATCTCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEWHEGG*SQSLCS
Trigger: GCTACACAGAGATTGGGACCAGCCACCCTCATGCCA...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTTTTTCGGCCTTCTGGTaGAAAATGGAGGACATGTCC +
Preference number: 4 (lower is better)
Translates to: APLNEGSQSGRVEDARASFSAFW*KMEDMS
Trigger: GGACATGTCCTCCATTTTCCACCAGAAGGCCGAAAA...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTTCTCCAGCTGCCGCTaGTGGTGCAGCACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICFSSCR*WCSTSW
Trigger: CCACGAGGTGCTGCACCACCAGCGGCAGCTGGAGAA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCAGTTTCTGCAATGCTCTaGCCCGATGAAGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSVSAML*PDEEIS
Trigger: GGAAATCTCTTCATCGGGCCAGAGCATTGCAGAAAC...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGAAGGCTTTGTCTGCATaGTGCTGGAGGCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKKALSA*CWRRCS
Trigger: AGAGCAGCGCCTCCAGCACCATGCAGACAAAGCCTT...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTACTTCTGCCTGCAGGTaGCGCAGCTGCACGCACTGC +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSTSACR*RSCTHC
Trigger: GCAGTGCGTGCAGCTGCGCCACCTGCAGGCAGAAGT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTGCTTTGCAGTTATCTaGAACTCCTCGTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQCFAVI*NSSCSF
Trigger: GAAAGAGCACGAGGAGTTCCAGATAACTGCAAAGCA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTATGTCCAACATCCTCTaGCAACTGTTCATATTTTTC +
Preference number: 4 (lower is better)
Translates to: ANAATVTRALGTSRGAASMSNIL*QLFIFF
Trigger: GAAAAATATGAACAGTTGCCAGAGGATGTTGGACAT...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGTCGGTGTTTCGGAGCTaGTGGGGCGGACTAATAACC +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLSVFRS*WGGLIT
Trigger: GGTTATTAGTCCGCCCCACCAGCTCCGAAACACCGA...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGTGAGCTGTAACCTGTaGCCAAGACGCTGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQVSCNL*PRRCFK
Trigger: CTTAAAGCAGCGTCTTGGCCACAGGTTACAGCTCAC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCTTGCCAGGGGCCGCGTaGCGGGGTGTCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSLPGAA*RGVCRW
Trigger: CCAGCGGCAGACACCCCGCCACGCGGCCCCTGGCAA...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCATGTTCTGCTGGTTGCTaGCCAGAATTTGAACGACCT +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSCSAGC*PEFERP
Trigger: AGGTCGTTCAAATTCTGGCCAGCAACCAGCAGAACA...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCCGGGGCACTGGTCAGTaGCGGCTCGGAACACCAGAA +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICRGTGQ*RLGTPE
Trigger: TTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCG...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTCAGCTGCGGGGCACTaGTCAGTGGCGGCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADSAAGH*SVAARN
Trigger: GTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGATGACTGCACTGGTGTaGCCCAGGACAAAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEMTALV*PRTKPG
Trigger: TCCAGGCTTTGTCCTGGGCCACACCAGTGCAGTCAT...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGCGTGACCTCACTCAATaGAATGACGAATTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVRDLTQ*NDEFWG
Trigger: CCCCCAGAATTCGTCATTCCATTGAGTGAGGTCACG...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAGGATGCCAAGCTCATaGGTGACCTGGTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGRMPSS*VTWSRF
Trigger: GAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAAAGCTCAGAGCCGAGTaGTCTCTGAGTCCTAGACAA +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQKLRAE*SLSPRQ
Trigger: TTGTCTAGGACTCAGAGACCACTCGGCTCTGAGCTT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR CAA 72 bp CACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTaGCAGACAGACCTGGCAATGTCTGTAGAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: HTSNSIRPSTVD*QTDLAMSVECR
Trigger: GCGGCACTCTACAGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGGGCCTTTGTTGTGTGTaGTCCAGTCAAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMGLCCV*SSQTSS
Trigger: AGAAGATGTTTGACTGGATCACACACAACAAAGGCC...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp ATCCTCCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTCACTCCTGCTCCAGCTaGCTCGCGATCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: ILLHCRVIVCHQHGGDVAHSCSS*LAICLI
Trigger: GATCAGGCAGATCGCGAGTCAGCTGGAGCAGGAGTG...AGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTCACAGCTGCAGCCTCTaGTGCAGCCGGACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGHSCSL*CSRTLR
Trigger: CCGCAAGGTCCGGCTGCATCAGAGGCTGCAGCTGTG...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGAATGCTCTGGCCCGATaGAGAGATTTCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKNALAR*RDFPTP
Trigger: AGGTGTGGGGAAATCTCTTCATCGGGCCAGAGCATT...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAAGGATTCCTGTAGGATaGGTTCTCCCTGAGACTCAA +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQRIPVG*VLPETQ
Trigger: TTGAGTCTCAGGGAGAACTCATCCTACAGGAATCCT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTCGTCCGCTCCTGGATaGCTTCGCGGATATGCTTTA +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPSSAPG*LRGYAL
Trigger: TAAAGCATATCCGCGAAGTCATCCAGGAGCGGACGA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTGCTGTTGCAAGCGGTaGAGTCATGGATCACCACTG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPCCCKR*SHGSPL
Trigger: CAGTGGTGATCCATGACTTCACCGCTTGCAACAGCA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAGCCGCACGGGGCTGGTaGGCCACTTGCGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPAARGW*ATCAGC
Trigger: ACACCCTGCGCAAGTGGCTCACCAGCCCCGTGCGGC...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACTGGTCAACAAGGAGTaGGCTGGGGCGATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRLVNKE*AGAILQ
Trigger: CTGGAGGATCGCCCCAGCTCACTCCTTGTTGACCAG...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGTCCTTCAGTAACAGCTaGTACTTCATGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSESFSNS*YFMILC
Trigger: GCAGAGAATCATGAAGTATCAGCTGTTACTGAAGGA...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TCAGGGCCCTTCCAGGTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTACTCCTTGGTAGACGTTaGTCTCATCCTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: SGPFQVIEALGRPQTRHLLLGRR*SHPPSL
Trigger: CAGTGAAGGAGGATGAGATCAACGTCTACCAAGGAG...TAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCGCCCTTCCAGGTAATTaGGGCTTTGGGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICALPGN*GFGAAT
Trigger: TGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGC...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGCAAAGTCAGCCAGTTTaGTGGTTGGCTTGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVQSQPV*WLAWLN
Trigger: GTTTAGCCAAGCCAACCATCAAACTGGCTGACTTTG...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAGCTCCACAATCTGATTaGCGGCTTGGGGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKAPQSD*RLGAGT
Trigger: TGTTCCTGCCCCAAGCCGTCAATCAGATTGTGGAGC...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCGAAACCCAGCCTCCTTaGGTTGAAAGGACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSETQPP*VERTPH
Trigger: GTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTC...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGTATTCTGTCATGATTaGTGCGGGCCGGAAACGTTA +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQVFCHD*CGPETL
Trigger: TAACGTTTCCGGCCCGCAGCAATCATGACAGAATAC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCTTGGGCAAGAGGTTCTaGAGGTCCGCATTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSLGKRF*RSALPE
Trigger: CTCAGGCAATGCGGACCTGCAGAACCTCTTGCCCAA...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACACATGTCCAGCAAGGTaGTCCGCTCATCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDTCPAR*SAHPGL
Trigger: CAGCCCTGGATGAGCGGAGCACCTTGCTGGACATGT...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp ATCCTCCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTAGCTGCCGCTGGTGGTaGAGCACCTCGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: ILLHCRVIVCHQHGGDVASCRWW*STSWMT
Trigger: TGTCATCCACGAGGTGCTGCACCACCAGCGGCAGCT...AGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGATGTTTGCTCAGAAATaGTTCTCCGTGGTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQMFAQK*FSVVLD
Trigger: ATCGAGAACCACGGAGAAGCATTTCTGAGCAAACAT...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCACCACACCTGTATGTTTaGTCAGAAATGCTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSPHLYV*SEMLLR
Trigger: ACGGAGAAGCATTTCTGAGCAAACATACAGGTGTGG...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTGCAGGGTGGTCTGCTaGTGCTGGCCAAAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICCRVVC*CWPKRL
Trigger: CAAGCGCTTTGGCCAGCAGCAGCAGACCACCCTGCA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAAAGAGCTCCTCCATCTaGGACTGCGCCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRKSSSI*DCASSS
Trigger: GCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTCTT...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAGCTTTGTCTGCATGGTaGTGGAGGCGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTALSAW*WRRCSA
Trigger: TGCAGAGCAGCGCCTCCAGCACCATGCAGACAAAGC...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGTGCAGGTGGCGCAGCTaGACGCACTGCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGCRWRS*THCSRC
Trigger: ACACCTGGAGCAGTGCGTGCAGCTGCGCCACCTGCA...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCTCGCGGCTCTTCTTGTaGTTGTGCGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSSRLFL*LCASFF
Trigger: GAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGA...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGTCGACCGTCTCGTCCTaGGGGGTGGCCGCACTGTCG +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWSTVSS*GVAALS
Trigger: CGACAGTGCGGCCACCCCGCAGGACGAGACGGTCGA...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAACTGACGAGCTCGGCTaGACTCGGTGTTTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTTDELG*TRCFGA
Trigger: AGCTCCGAAACACCGAGTGCAGCCGAGCTCGTCAGT...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCCGTTCATCATGTCGTTaGACCGCCTGGGTACTATGC +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPRSSCR*TAWVLC
Trigger: GCATAGTACCCAGGCGGTGCAACGACATGATGAACG...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACGCTCAAAGAGGAAGATaGGCCTCTCTCTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNAQRGR*ASLCSE
Trigger: CTCGCTGCAGAGAGAGGCGCATCTTCCTCTTTGAGC...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAAGGAGCACGTGCTCATaGGGTCAGTATCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKRSTCS*GQYPCQ
Trigger: CTGGCAAGGATACTGACCGCATGAGCACGTGCTCCT...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAAAACTTAGTGGCCACTaGTCGCTTGGTTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQKLSGH*SLGSFL
Trigger: CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGGTGCTGGAGGCTCTaGAGGATGCCAAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSGCWRL*RMPSSW
Trigger: CCATGAGCTTGGCATCCTGCAGAGCCTCCAGCACCC...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCCAGGTGTGCTATCCTaGAGTTGTGCAGGTACCGGA +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSPGVLS*SCAGTG
Trigger: TCCGGTACCTGCACAACTGCAGGATAGCACACCTGG...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGGCAGAAGCCTGCTCTaGAGAAAGTTTTTAATGCTA +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQGRSLL*RKFLML
Trigger: TAGCATTAAAAACTTTCTGCAGAGCAGGCTTCTGCC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGCCGCGGGGCGGCCAGTaGTTAATCGGCTTTTATTTC +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGPRGGQ*LIGFYF
Trigger: GAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGG...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGAGAAAACTTCGAGGGTaGCCAGAAACCCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDERKLRG*PETQPP
Trigger: AGGAGGCTGGGTTTCTGGGCACCCTCGAAGTTTTCT...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGCCACAGCAACCCTTGTaGTTGAGACGGCAGCATGAG +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGPQQPL*LRRQHE
Trigger: CTCATGCTGCCGTCTCAAGCACAAGGGTTGCTGTGG...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAAGATGTTGCTACTGCTaGTGCTTTCACTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQRCCYC*CFHCMP
Trigger: AGGCATGCAGTGAAAGCAGCAGCAGTAGCAACATCT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGAGATGTTGCTACTGCTaGTGCTTTCACTCTGACATC +
Preference number: 4 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMRCCYC*CFHSDI
Trigger: GATGTCAGAGTGAAAGCAGCAGCAGTAGCAACATCT...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGTGCAGACCTCCTCGCTaGGAATACAGGCTAGATAGG +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKCRPPR*EYRLDR
Trigger: CCTATCTAGCCTGTATTCCCAGCGAGGAGGTCTGCA...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCGCATGGTGGACACCTTaGGCAAGAGGTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSAWWTP*ARGSAG
Trigger: ACCTGCAGAACCTCTTGCCCAAGGTGTCCACCATGC...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAGCCGGTCCAGCATGGTaGACACCTTGGGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRAGPAW*TPWARG
Trigger: ACCTCTTGCCCAAGGTGTCCACCATGCTGGACCGGC...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCCTCAGCTGGAAGCACTaGTCCAGCTTCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSLSWKH*SSFSFL
Trigger: GAGGAAGCTGAAGCTGGACCAGTGCTTCCAGCTGAG...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGTTTTCGGCCTTCTGGTaGAAAATGGAGGACATGTCC +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVFSAFW*KMEDMS
Trigger: GGACATGTCCTCCATTTTCCACCAGAAGGCCGAAAA...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTTCTCCAGCTGCCGCTaGTGGTGCAGCACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADFSSCR*WCSTSW
Trigger: CCACGAGGTGCTGCACCACCAGCGGCAGCTGGAGAA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGTTTCTGCAATGCTCTaGCCCGATGAAGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQVSAML*PDEEIS
Trigger: GGAAATCTCTTCATCGGGCCAGAGCATTGCAGAAAC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAATTGTCTGCATGGTGCTaGAGGCGCTGCTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKLSAWC*RRCSAI
Trigger: GATTGCAGAGCAGCGCCTCCAGCACCATGCAGACAA...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GCTATCCTGCAGTTGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTGCAGAAGATCTTGCCCTTaGTGGATGACGTCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: AILQLCRYRTASRTSPRCRRSCP*WMTSKV
Trigger: GACTTTTGACGTCATCCACCAAGGGCAAGATCTTCT...GCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACAACTCCAGCAGGTCCTaGACCCGAGTTGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNNSSRS*TRVAMS
Trigger: AGACATGGCAACTCGGGTCCAGGACCTGCTGGAGTT...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGTCCGGCATTTAACATaGACTCTCCGTTGCGGATCC +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEVRHLT*TLRCGS
Trigger: GGATCCGCAACGGAGAGTCCATGTTAAATGCCGGAC...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGGTGCGTCACCATTCCTaGCATGTTCACGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKVRHHS*HVHAVP
Trigger: AGGAACAGCGTGAACATGCCAGGAATGGTGACGCAC...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAAACTCGCCATTGTCATaGATCCATTCCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQNSPLS*IHSKAC
Trigger: GCAGGCTTTGGAATGGATCCATGACAATGGCGAGTT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGTTTACAATGCCAGGTaGAATCTCTTCCACGCCACT +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQVYNAR*NLFHAT
Trigger: AGTGGCGTGGAAGAGATTCCACCTGGCATTGTAAAC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGATGGATCGTCCGCTCCTaGATGACTTCGCGGATATGC +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGWIVRS*MTSRIC
Trigger: GCATATCCGCGAAGTCATCCAGGAGCGGACGATCCA...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATAGGGCTCCCTTCAGGTaGATCGTCCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNRAPFR*IVRSWM
Trigger: CATCCAGGAGCGGACGATCCACCTGAAGGGAGCCCT...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATTCTGGCCCCGTCGGATaGTCAGCTCGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNSGPVG*SARCCC
Trigger: GCAACAGCAACGAGCTGACCATCCGACGGGGCCAGA...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGCAGGCCTTCTGCCGCTaGGGAGCGGTCAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLQAFCR*GAVSCP
Trigger: CGGACAACTGACCGCTCCCCAGCGGCAGAAGGCCTG...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAAGCCACGGATGCGGGTaGACTGGCGTCATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRSHGCG*TGVIAG
Trigger: TCCAGCAATGACGCCAGTCCACCCGCATCCGTGGCT...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACTGGATGGCCATGGGTaGCGGCAGGGGCACGGCGTC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPLDGHG*RQGHGV
Trigger: GACGCCGTGCCCCTGCCGCCACCCATGGCCATCCAG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTCCTGTGAGTCTGGCTaGAGGAGGCTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICSCESG*RRLCCW
Trigger: CCAGCAGCACAGCCTCCTCCAGCCAGACTCACAGGA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACGTGTTTCGGAGCTGGTaGGGCGGACTAATAACCGAG +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNVFRSW*GGLITE
Trigger: CTCGGTTATTAGTCCGCCCCACCAGCTCCGAAACAC...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACACAACAAGGAGTGAGCTaGGGCGATCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTQQGVS*GDPPVP
Trigger: TGGCACTGGAGGATCGCCCCAGCTCACTCCTTGTTG...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCTTCTCTTTAAAGAGCTaGATTTCCTTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: SVWTCRGRPCFCRCRPAAFSLKS*ISFLPS
Trigger: AGATGGAAGAAAGGAAATCCAGCTCTTTAAAGAGAA...GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTTTGTCTGCCTCTGCCTaGCTCGAGGCTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGLSASA*LEAAEE
Trigger: CTCCTCTGCAGCCTCGAGCCAGGCAGAGGCAGACAA...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATACTTGGCGGGGGCGTCTaGGCTCGACCCCGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSILGGGV*ARPRGV
Trigger: AACGCCTCGGGGTCGAGCCCAGACGCCCCCGCCAAG...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACGGGGGAGGCGGGGATaGAGCTCCAGAAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPRGRRG*SSRRSP
Trigger: GGGGCTCCTTCTGGAGCTCCATCCCCGCCTCCCCCG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCTGCCCGGGGCACTGGTCAGTaGCGGCTCGGAACACCAGAA +
Preference number: 4 (lower is better)
Translates to: SLGSFLITFLNDRESAPARGTGQ*RLGTPE
Trigger: TTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCG...GGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAGCCCAGGACAAAGCCTaGAATCCAGCCCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRAQDKA*NPALSC
Trigger: GCAGCTGAGGGCTGGATTCCAGGCTTTGTCCTGGGC...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGTGGCCACTGCTCGCTTaGTTCCTTTCTGATCACATT +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVWPLLA*FLSDHI
Trigger: AATGTGATCAGAAAGGAACCAAGCGAGCAGTGGCCA...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAATCCAGGAGGCGACCCTaGTCAGCCATTTCTAAGACC +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKSRRRP*SAISKT
Trigger: GGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGA...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGAGATTAACAGCTGATTaGCAGGTGAAAGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETRLTAD*QVKENE
Trigger: CTCATTCTCTTTCACCTGCCAATCAGCTGTTAATCT...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAGGTAGGGGAGGCAGGTaGGAAAATGACAGACCGAAG +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKGRGGR*ENDRPK
Trigger: CTTCGGTCTGTCATTTTCCCACCTGCCTCCCCTACC...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAGGTAGGGGAGGCAGGTaGGAAAATGACAGACCGAAG +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGGRGGR*ENDRPK
Trigger: CTTCGGTCTGTCATTTTCCCACCTGCCTCCCCTACC...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGGTCTCTTTGAACCGATaGCACAGGGCTACGACCCTA +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKVSLNR*HRATTL
Trigger: TAGGGTCGTAGCCCTGTGCCATCGGTTCAAAGAGAC...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATCAAGACCCAGGTGTCTaGCTGGCTTGGGAAGCGGGC +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADQDPGV*LAWEAG
Trigger: GCCCGCTTCCCAAGCCAGCCAGACACCTGGGTCTTG...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
3UTR CAA 72 bp GTGTTGTGTTCAGGGCCCTTCCAGGTAATTGAGGCTTaGGGGCGGCCACAGACTCGACATCTAAGAACAACG +
Preference number: 4 (lower is better)
Translates to: VLCSGPFQVIEA*GRPQTRHLRTT
Trigger: CGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGAACACAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGTTTATCTCTCCCACCTaGAAGGTATGCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSEFISPT*KVCNFF
Trigger: GAAAAAGTTGCATACCTTTCAGGTGGGAGAGATAAA...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCTTAGCTAGGATGTCCTaGAGTTCCTCCAGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSLARMS*SSSSRD
Trigger: GTCTCGGCTGGAGGAACTTCAGGACATCCTAGCTAA...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCTTAGCTAGGATGTCCTaGAGTTCCTCCAGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSLARMS*SSSSRD
Trigger: GTCTCGGCTGGAGGAACTTCAGGACATCCTAGCTAA...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTACCTTCTTCTTCAGCTaGGAATGTTCCTCGATCATA +
Preference number: 4 (lower is better)
Translates to: APLNEGSQSGRVEDARASTFFFS*ECSSII
Trigger: TATGATCGAGGAACATTCTCAGCTGAAGAAGAAGGT...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TTGAGAGTCCCGTCCGGGTTCTCCACGATGACTGCACTGGTGTGGCCCAGGACAGATTGGCCACCGACATaGTGCGGTTTATATTTACAT +
Preference number: 4 (lower is better)
Translates to: LRVPSGFSTMTALVWPRTDWPPT*CGLYLH
Trigger: ATGTAAATATAAACCGCATCATGTCGGTGGCCAATC...TGTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGGACGGGACTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAACAGTCTAGCACCTGCTaGACGTCCTGCTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKQSSTC*TSCWKT
Trigger: TGTTTTCCAGCAGGACGTTCAGCAGGTGCTAGACTG...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTCTTCAAAATCTTCATaGCGTTTCTGCAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQSSKSS*RFCNAL
Trigger: CAGAGCATTGCAGAAACGTCATGAAGATTTTGAAGA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACGGAAGAGCTCCAGCTTaGTCTTGCGCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDGRAPA*SCAPGR
Trigger: TCTTCCAGGAGCGCAAGATCAAGCTGGAGCTCTTCC...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATGCTCCAGGTGCTTGCTaGTCATGGGCGTCACGTGGT +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADAPGAC*SWASRG
Trigger: ACCACGTGACGCCCATGATCAGCAAGCACCTGGAGC...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTAAGACCACGTACTGCTaGCACTGGTCCAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGKTTYC*HWSSRL
Trigger: GAGACGGCTGGACCAGTGTCAGCAGTACGTGGTCTT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCGCGAGTCTTTGTGGTTaGAGATGCCCTCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPASLCG*RCPPFP
Trigger: TGGAAATGGAGGGCATCTTCAACCACAAAGACTCGC...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATGGCCTTGTCATCCTGTaGGTCTGGCTGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADGLVIL*VWLEEA
Trigger: AGCCTCCTCCAGCCAGACTCACAGGATGACAAGGCC...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGAATTATCCGAAGGGTTaGAGGAAGGGCTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVNYPKG*RKGCYY
Trigger: ATAGTAGCAGCCCTTCCTTCAACCCTTCGGATAATT...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGCTCCTTGGTAGACGTTaGTCTCATCCTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLLLGRR*SHPPSL
Trigger: CAGTGAAGGAGGATGAGATCAACGTCTACCAAGGAG...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACCGGGTTCTCCACGATaGCTGCACTGGTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKPGSPR*LHWCGP
Trigger: TGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACAGATACCTTGTTGCTaGGTCCTTCCCGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGQIPCC*VLPVTS
Trigger: GGAAGTCACGGGAAGGACTCAGCAACAAGGTATCTG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGCTGAACCCATGTCATTaGCAGCGATGCACGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLLNPCH*QRCTCR
Trigger: TCTACACGTGCATCGCTGTCAATGACATGGGTTCAG...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCACGCTTGGTTCCTTTCTaGTCACATTTCTTAACGACA +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSRLVPF*SHFLTT
Trigger: TGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCG...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAATGGGCAGAGTGTAAGTaGCGGTCCTCCACCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKWAECK*RSSTPA
Trigger: CGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCA...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGCACGAAAAGTCTCTTTaGACCGATGGCACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKHEKSL*TDGTGL
Trigger: TAGCCCTGTGCCATCGGTTCAAAGAGACTTTTCGTG...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTCGAATGCTGCCACAGTaGCTCGGGCATTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGRMLPQ*LGHWVP
Trigger: TGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCG...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGTTCTGTCATGATTGCTaGGGGCCGGAAACGTTAAAA +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVFCHDC*GPETLK
Trigger: TTTTAACGTTTCCGGCCCGCAGCAATCATGACAGAA...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTACATGTCCAGCAAGGTaGTCCGCTCATCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSTCPAR*SAHPGL
Trigger: CAGCCCTGGATGAGCGGAGCACCTTGCTGGACATGT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCGCATCTTCTAGGTCCTaGAGCTCTGAGGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSASSRS*SSEGRS
Trigger: AGACCTTCCCTCAGAGCTGCAGGACCTAGAAGATGC...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCGCATCTTCTAGGTCCTaGAGCTCTGAGGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSASSRS*SSEGRS
Trigger: AGACCTTCCCTCAGAGCTGCAGGACCTAGAAGATGC...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATAGGGTGGTCTGCTGCTaGTGGCCAAAGCGCTTGATG +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNRVVCC*WPKRLM
Trigger: CATCAAGCGCTTTGGCCAGCAGCAGCAGACCACCCT...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATTGCGCCTCGTCCAGCTaGTGCAGCACCGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNCASSS*CSTVSM
Trigger: CATTGAGACGGTGCTGCAGCAGCTGGACGAGGCGCA...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATAAGAGCTCCTCCATCTaGGACTGCGCCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADKSSSI*DCASSS
Trigger: GCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTCTT...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCGCTTTGTCTGCATGGTaGTGGAGGCGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICALSAW*WRRCSA
Trigger: TGCAGAGCAGCGCCTCCAGCACCATGCAGACAAAGC...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTATGGCATGCTGGAACTaGTCGTGCTCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSMACWN*SCSRWS
Trigger: GCTCCAGCGAGAGCACGAGCAGTTCCAGCATGCCAT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTGGCTCTCGAGGACGCTaGAGACCTGCTCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGGSRGR*RPALRF
Trigger: AAACCTCAGAGCAGGTCTGCAGCGTCCTCGAGAGCC...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAGGCTCTCGAGGACGCTaGAGACCTGCTCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRGSRGR*RPALRF
Trigger: AAACCTCAGAGCAGGTCTGCAGCGTCCTCGAGAGCC...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACATCCTCCGAGCAAGGGTaGAAGCCTTCAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTSSEQG*KPSGMP
Trigger: AGGCATTCCTGAAGGCTTGCACCCTTGCTCGGAGGA...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATAGGAGCTCCTGGGTGTaGTGTATACTGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNRSSWV*CILEPV
Trigger: CACGGGCTCCAGTATACAGCACACCCAGGAGCTCCT...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGGGGACCAGGCCTTCTaGCGCTGGGGAGCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSGDQAF*RWGAVS
Trigger: ACTGACCGCTCCCCAGCGGCAGAAGGCCTGGTCCCC...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAGGGGACCAGGCCTTCTaGCGCTGGGGAGCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPGDQAF*RWGAVS
Trigger: ACTGACCGCTCCCCAGCGGCAGAAGGCCTGGTCCCC...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCTGCCCTCCATTTCCATaGTACTTCTGGAGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSCPPFP*YFWSGR
Trigger: TCGCCCACTCCAGAAGTAGCATGGAAATGGAGGGCA...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATTCGTCGGAGTCCTTCTaGGAGCCGGCGTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHSSESF*EPASAL
Trigger: GAGCGCCGACGCCGGCTCGCAGAAGGACTCCGACGA...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCAGGGCCCTTCCAGGTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTACCTCCAGTGCCATCTTaGTTTTCACGAGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SGPFQVIEALGRPQTRHLPPVPS*FSRVPQ
Trigger: TTGAGGAACTCGTGAAAAGCAAGATGGCACTGGAGG...TAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTAGATGCGCCTCTCTCTaGAGCGAGGCAGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGRCASL*SEAEVL
Trigger: CAGGACTTCTGCCTCGCTGCAGAGAGAGGCGCATCT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATCATCTTGTCTGCCTCTaGCTGGCTCGAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNHLVCL*LARGCR
Trigger: TCTGCAGCCTCGAGCCAGGCAGAGGCAGACAAGATG...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTGCGGTCAGTATCCTTaGCAGGGGCCGCGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSCGQYP*QGPRGG
Trigger: CCCGCCACGCGGCCCCTGGCAAGGATACTGACCGCA...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAATTGCTCTGGGTGGACTaGACGGACTGCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKLLWVD*TDCSLA
Trigger: GGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAA...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCGATGCACGTGTAGATaGCGTCATCTTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSRCTCR*RHLPWS
Trigger: TGACCACGGAAGATGACGGCATCTACACGTGCATCG...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAGATGATTTCAGGGGCTaGGAATTCAGGGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGDDFRG*EFRVPQ
Trigger: CTGGGGAACCCTGAATTCGCAGCCCCTGAAATCATC...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATCCACACCAGTGCGAATaGTGCCACAGTGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADPHQCE*CHSDSG
Trigger: GCCCGAGTCACTGTGGCAGCATTCGCACTGGTGTGG...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCAGAAAACTTCGAGGGTaGCCAGAAACCCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSRKLRG*PETQPP
Trigger: AGGAGGCTGGGTTTCTGGGCACCCTCGAAGTTTTCT...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGTCCAAGAAGATATTCTaGTGGTTGGAAATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PRQGHGSGRHLGASSPETSKKIF*WLEMEE
Trigger: TTCTTCCATTTCCAACCAGCAGAATATCTTCTTGGA...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR CCA 90 bp GCTATCCTGCAGTTGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTGCAGCCTGAGTTCTTTTTaGGAAAGCTTTCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: AILQLCRYRTASRTSPRCSLSSF*ESFHCS
Trigger: AGAGCAGTGAAAGCTTTCCCAAAAAGAACTCAGGCT...GCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATACTTTTCGGCCTTCTaGTGGAAAATGGAGGACATG +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQYFSAF*WKMEDM
Trigger: CATGTCCTCCATTTTCCACCAGAAGGCCGAAAAGTA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAATTCTCCAGCTGCCGCTaGTGGTGCAGCACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKFSSCR*WCSTSW
Trigger: CCACGAGGTGCTGCACCACCAGCGGCAGCTGGAGAA...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAAGAAGATCTTGCCCTTaGTGGATGACGTCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQRRSCP*WMTSKV
Trigger: GACTTTTGACGTCATCCACCAAGGGCAAGATCTTCT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAATCCACACCAGAGGCCTaGACCTCATTGACATACTGC +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKSTPEA*TSLTYC
Trigger: GCAGTATGTCAATGAGGTCCAGGCCTCTGGTGTGGA...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTGTCCGGCATTTAACATaGACTCTCCGTTGCGGATCC +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSVRHLT*TLRCGS
Trigger: GGATCCGCAACGGAGAGTCCATGTTAAATGCCGGAC...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp ATCCTCCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTCTGCTGCCGTCTCCTTaGCTGTCCAGATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ILLHCRVIVCHQHGGDVALLPSP*LSRSSP
Trigger: TGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAG...AGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACTGCTGCCGTCTCCTTaGCTGTCCAGATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRLLPSP*LSRSSP
Trigger: TGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAG...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCGTGAGCTGTAACCTGTaGCCAAGACGCTGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPVSCNL*PRRCFK
Trigger: CTTAAAGCAGCGTCTTGGCCACAGGTTACAGCTCAC...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GCCCTCAGCTGCGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTTCATGATTCTCTGCACTaGTTTGATCAACAGATCTGT +
Preference number: 4 (lower is better)
Translates to: ALSCGALVSGGSEHQKHVHDSLH*FDQQIC
Trigger: ACAGATCTGTTGATCAAACCAGTGCAGAGAATCATG...AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCTGCCTTGTCTGCCTCTGCCTaGCTCGAGGCTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLGSFLITFLNDRESAPALSASA*LEAAEE
Trigger: CTCCTCTGCAGCCTCGAGCCAGGCAGAGGCAGACAA...GGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCCCAGCACCTTCATCTTaGGGATCGGCTCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICPAPSS*GSAPLL
Trigger: GAGAAGCGGAGCCGATCCCCAAGATGAAGGTGCTGG...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCCGTGACCTCACTCAATaGAATGACGAATTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPRDLTQ*NDEFWG
Trigger: CCCCCAGAATTCGTCATTCCATTGAGTGAGGTCACG...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGATGCCGTCATCTTCCGTaGTCACGCCCACAATCTTCA +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGCRHLP*SRPQSS
Trigger: TGAAGATTGTGGGCGTGACCACGGAAGATGACGGCA...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCAGCTCATGGGTGACCTaGTCGCGCTTCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSSSWVT*SRFINF
Trigger: GAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCAGACCAGGATGTAGCTaGTGGGGGTCTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSRPGCS*WGSQRC
Trigger: ACACCTTTGAGACCCCCACCAGCTACATCCTGGTCT...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCAGCCGAGGGACGCTTaGCGGGGTCCTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEQPRDA*RGPPAG
Trigger: TCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGGGTCGAACATCATTCTaGTGTTTGCGCCGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKGRTSF*CLRRSM
Trigger: CATTGAGCGGCGCAAACACCAGAATGATGTTCGACC...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGTGGGCATCAGGAACCTaGGAGCCATTCTGCACAAAT +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLWASGT*EPFCTN
Trigger: ATTTGTGCAGAATGGCTCCCAGGTTCCTGATGCCCA...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTCCGGCCAAGCACCGTaGATTTGCAGACAGACCTGG +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICSGQAP*ICRQTW
Trigger: CCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATCTAGCGGCTTGTGTGTaGGAAATGACACCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNLAACV*EMTPRP
Trigger: GGGGCGGGGTGTCATTTCCCACACACAAGCCGCTAG...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
3UTR CAA 72 bp CTGCTGGTTGCTGGCCAGAATTTGAACGACCTCTCCTaGGTAGACGTTGATCTCATCCTCCTTCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: LLVAGQNLNDLS*VDVDLILLHCR
Trigger: ACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGAGAGGTCGTTCAAATTCTGGCCAGCAACCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTCTGCTCTGTATCCTCTaGAGCAGCTTCTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGLLCIL*SSFCPS
Trigger: GGAGGGACAGAAGCTGCTTCAGAGGATACAGAGCAG...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGGCAAGCTTTACACCATaGATCCACGTTGCTCATATA +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVASFTP*IHVAHI
Trigger: TATATGAGCAACGTGGATTCATGGTGTAAAGCTTGC...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATGCAGCACCTCGTGGATaGCATCCAGGACATGGTGCA +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADAAPRG*HPGHGA
Trigger: TGCACCATGTCCTGGATGTCATCCACGAGGTGCTGC...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATACACAGCTGCAGCCTCTaGTGCAGCCGGACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIHSCSL*CSRTLR
Trigger: CCGCAAGGTCCGGCTGCATCAGAGGCTGCAGCTGTG...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACACAGTCTAGCACCTGCTaGACGTCCTGCTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTQSSTC*TSCWKT
Trigger: TGTTTTCCAGCAGGACGTTCAGCAGGTGCTAGACTG...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCGGAAGAGCTCCAGCTTaGTCTTGCGCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICGRAPA*SCAPGR
Trigger: TCTTCCAGGAGCGCAAGATCAAGCTGGAGCTCTTCC...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGAAGACCACGTACTGCTaGCACTGGTCCAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVKTTYC*HWSSRL
Trigger: GAGACGGCTGGACCAGTGTCAGCAGTACGTGGTCTT...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGTGTTCCAATATCAGCTaGGTAGAATCAGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSECSNIS*VESGLF
Trigger: AAATAAGCCTGATTCTACTCAGCTGATATTGGAACA...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTGGGCGATGCACAGTaGACCACAGGGGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSVGDAQ*TTGDQA
Trigger: GGCCTGGTCCCCTGTGGTTCACTGTGCATCGCCCAC...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAGTGGGCGATGCACAGTaGACCACAGGGGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIVGDAQ*TTGDQA
Trigger: GGCCTGGTCCCCTGTGGTTCACTGTGCATCGCCCAC...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGCTGCATCTTGGTCTGTaGCCAAGAATGTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGLHLGL*PRMCPA
Trigger: TGCAGGACACATTCTTGGTCACAGACCAAGATGCAG...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACTCCTTGGTAGACGTTaGTCTCATCCTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGLLGRR*SHPPSL
Trigger: CAGTGAAGGAGGATGAGATCAACGTCTACCAAGGAG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTGCTGAGTCCTTCCCGTaGCTTCCGATAACCGTTCTC +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGAESFP*LPITVL
Trigger: GAGAACGGTTATCGGAAGTCACGGGAAGGACTCAGC...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGGCCCTTCCAGGTAATTaGGGCTTTGGGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLALPGN*GFGAAT
Trigger: TGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGC...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGTGTAGTAGGTCGTGTTaGGCTGAACAGCATCTCCAA +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDECSRSC*AEQHLQ
Trigger: TTGGAGATGCTGTTCAGCTCAACACGACCTACTACA...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCTGTAGTAGGTCGTGTTaGGCTGAACAGCATCTCCAA +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTCSRSC*AEQHLQ
Trigger: TTGGAGATGCTGTTCAGCTCAACACGACCTACTACA...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTGTTTGCGCCGCTCAATaGAGGAAGTCAGTCTGGACG +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGVCAAQ*RKSVWT
Trigger: CGTCCAGACTGACTTCCTTCATTGAGCGGCGCAAAC...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp TCCTTGGTAGACGTTGATCTCATCCTCCTTCACTGCCGTGTAATCGTGTGTCACGTTTGCGCCGCTCAATaGAGGAAGTCAGTCTGGACG +
Preference number: 4 (lower is better)
Translates to: SLVDVDLILLHCRVIVCHVCAAQ*RKSVWT
Trigger: CGTCCAGACTGACTTCCTTCATTGAGCGGCGCAAAC...GTGACACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCAATTCAGATTAACAGCTaGTTGGCAGGTGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSIQINS*LAGERE
Trigger: TTCTCTTTCACCTGCCAATCAGCTGTTAATCTGAAT...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTAGGCAGGTGGGAAAATaGCAGACCGAAGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGRQVGK*QTEGRN
Trigger: GTTCCTGCCTTCGGTCTGTCATTTTCCCACCTGCCT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACACGAAAAGTCTCTTTaGACCGATGGCACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGHEKSL*TDGTGL
Trigger: TAGCCCTGTGCCATCGGTTCAAAGAGACTTTTCGTG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATACATGTCCAGCAAGGTaGTCCGCTCATCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNTCPAR*SAHPGL
Trigger: CAGCCCTGGATGAGCGGAGCACCTTGCTGGACATGT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAAGCTGCCGCTGGTGGTaGAGCACCTCGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKSCRWW*STSWMT
Trigger: TGTCATCCACGAGGTGCTGCACCACCAGCGGCAGCT...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAGATGCAGCCGGACCTTaGGGTGTTGCCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRDAAGP*GVARCS
Trigger: AGAACATCTGGCAACACCGCAAGGTCCGGCTGCATC...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGATGACGTTTCTGCAATaGTCTGGCCCGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLMTFLQ*SGPMKR
Trigger: TCTCTTCATCGGGCCAGAGCATTGCAGAAACGTCAT...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAGGGTGGTCTGCTGCTaGTGGCCAAAGCGCTTGATG +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNRVVCC*WPKRLM
Trigger: CATCAAGCGCTTTGGCCAGCAGCAGCAGACCACCCT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGAAGAGCTCCTCCATCTaGGACTGCGCCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLKSSSI*DCASSS
Trigger: GCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTCTT...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGGGTCAAGGCTTTGTCTaGATGGTGCTGGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVGQGFV*MVLEAL
Trigger: CAGCGCCTCCAGCACCATGCAGACAAAGCCTTGACC...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATATGGCATGCTGGAACTaGTCGTGCTCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNMACWN*SCSRWS
Trigger: GCTCCAGCGAGAGCACGAGCAGTTCCAGCATGCCAT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAGGAATGCCTCCTTCTaGTCCAGGTGCTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTRNASF*SRCLLI
Trigger: GATCAGCAAGCACCTGGAGCAGAAGGAGGCATTCCT...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTTCACGCTGTTCCTGTaGAGGTATTTCAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPFTLFL*RYFRKT
Trigger: CGTCTTCCTGAAATACCTGCACAGGAACAGCGTGAA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAATCAGGAGCTTTGATGTaGGTCACCATTCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKSGALM*VTIPGM
Trigger: CATGCCAGGAATGGTGACGCACATCAAAGCTCCTGA...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGATCCATTCCAAAGCCTaGTTGGCACTCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEIHSKA*LALLSK
Trigger: CTTTGAGAGGAGTGCCAAGCAGGCTTTGGAATGGAT...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAGGAGCTCCTGGGTGTaGTGTATACTGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNRSSWV*CILEPV
Trigger: CACGGGCTCCAGTATACAGCACACCCAGGAGCTCCT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGGCCAGCTTCTTCACGTaGCCGTCGGCCTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQASFFT*PSALPL
Trigger: CAGCGGCAAGGCCGACGGGCACGTGAAGAAGCTGGC...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCGCCAGCTTCTTCACGTaGCCGTCGGCCTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSASFFT*PSALPL
Trigger: CAGCGGCAAGGCCGACGGGCACGTGAAGAAGCTGGC...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTCACGAGTTCCTCAATTaGACTGACGAGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGHEFLN*TDELGC
Trigger: GCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTG...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCGCTCAAAGAGGAAGATaGGCCTCTCTCTGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICAQRGR*ASLCSE
Trigger: CTCGCTGCAGAGAGAGGCGCATCTTCCTCTTTGAGC...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTGCCTGGCTCGAGGCTaGAGAGGAGACCAGCACGGG +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSCLARG*RGDQHG
Trigger: CCCGTGCTGGTCTCCTCTGCAGCCTCGAGCCAGGCA...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTGGACTGCACGGACTaGTCGCTGGCCGAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSVDCTD*SLAEEH
Trigger: GTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCAC...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAGTGGACTGCACGGACTaGTCGCTGGCCGAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIVDCTD*SLAEEH
Trigger: GTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCAC...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATTGCTTTCACTCCCGTTaGTCTGGGTGGACTGCACGG +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNCFHSR*SGWTAR
Trigger: CCGTGCAGTCCACCCAGAGCAACGGGAGTGAAAGCA...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGATGTTGCTACTGCTaGTGCTTTCACTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGRCCYC*CFHSRC
Trigger: GCAACGGGAGTGAAAGCAGCAGCAGTAGCAACATCT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGATGGAGATGTTGCTACTaGTGCTGCTTTCACTCCCGT +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGWRCCY*CCFHSR
Trigger: ACGGGAGTGAAAGCAGCAGCAGTAGCAACATCTCCA...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACTCATCCTCCTTCACTaGCGTGTAATCGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGLILLH*RVIVCH
Trigger: GTGACACACGATTACACGGCAGTGAAGGAGGATGAG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTCAGAGAATCTGCCCCTaGCAAGCTCAGCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGQRICP*QAQPLH
Trigger: GTGAAGTGGCTGAGCTTGGCAGGGGCAGATTCTCTG...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATGCTATCCTGCAGTTGTaGAGGTACCGGACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNAILQL*RYRTAS
Trigger: GGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTCCGCGGGGCGGCCAGTaGTTAATCGGCTTTTATTTC +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSPRGGQ*LIGFYF
Trigger: GAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGG...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTCACCAGTGCGAATGCTaGCACAGTGACTCGGGCATT +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSHQCEC*HSDSGI
Trigger: AATGCCCGAGTCACTGTGGCAGCATTCGCACTGGTG...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATGACTCCCCACACCAGTaGGAATGCTGCCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADDSPHQ*ECCHSD
Trigger: GTCACTGTGGCAGCATTCGCACTGGTGTGGGGAGTC...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAACCTTCTGGTGGAAAATaGAGGACATGTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKPSGGK*RTCPAR
Trigger: CCTTGCTGGACATGTCCTCCATTTTCCACCAGAAGG...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCCCTTCTGGTGGAAAATaGAGGACATGTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSPSGGK*RTCPAR
Trigger: CCTTGCTGGACATGTCCTCCATTTTCCACCAGAAGG...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCTGCCGTGGTCTGCTGCTGCTaGCCAAAGCGCTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: SLGSFLITFLNDRESAPAVVCCC*PKRLMR
Trigger: CCTCATCAAGCGCTTTGGCCAGCAGCAGCAGACCAC...GGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGATTGTCTGCATGGTGCTaGAGGCGCTGCTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRLSAWC*RRCSAI
Trigger: GATTGCAGAGCAGCGCCTCCAGCACCATGCAGACAA...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTAACTCCAGCAGGTCCTaGACCCGAGTTGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSNSSRS*TRVAMS
Trigger: AGACATGGCAACTCGGGTCCAGGACCTGCTGGAGTT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTATCATGGGCGTCACGTaGTCCGTCTCAGAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSIMGVT*SVSEFG
Trigger: CCCAAACTCTGAGACGGACCACGTGACGCCCATGAT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp ATCCTCCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTATCATGGGCGTCACGTaGTCCGTCTCAGAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ILLHCRVIVCHQHGGDVAIMGVT*SVSEFG
Trigger: CCCAAACTCTGAGACGGACCACGTGACGCCCATGAT...AGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTGGATCGTCCGCTCCTaGATGACTTCGCGGATATGC +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICWIVRS*MTSRIC
Trigger: GCATATCCGCGAAGTCATCCAGGAGCGGACGATCCA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCACGTCCGTGAGGCGATaGAAATCGTATCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICTSVRR*KSYQAG
Trigger: GCCAGCCTGATACGATTTCCATCGCCTCACGGACGT...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGAGAACTTCCACGGTCTaGCCCCGTCGGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLRTSTV*PRRMVS
Trigger: GCTGACCATCCGACGGGGCCAGACCGTGGAAGTTCT...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACAGGCCTTCTGCCGCTaGGGAGCGGTCAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPQAFCR*GAVSCP
Trigger: CGGACAACTGACCGCTCCCCAGCGGCAGAAGGCCTG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATGGGCCCCGATCATGTaGGGCTGGAGGGAAGCCACG +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIWAPIM*GWREAT
Trigger: CGTGGCTTCCCTCCAGCCCCACATGATCGGGGCCCA...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATCTCGTCCTGCGGGGTaGCCGCACTGTCGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSISRPAG*PHCRRS
Trigger: ACTCCGACGACAGTGCGGCCACCCCGCAGGACGAGA...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCGTGTTTCGGAGCTGGTaGGGCGGACTAATAACCGAG +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICVFRSW*GGLITE
Trigger: CTCGGTTATTAGTCCGCCCCACCAGCTCCGAAACAC...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATCAACAAGGAGTGAGCTaGGGCGATCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADQQGVS*GDPPVP
Trigger: TGGCACTGGAGGATCGCCCCAGCTCACTCCTTGTTG...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGCTGCTACTATCTCCCTaGTCAACAAGGAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGLLLSP*STRSEL
Trigger: CAGCTCACTCCTTGTTGACCAGGGAGATAGTAGCAG...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCTGCTACTATCTCCCTaGTCAACAAGGAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSLLLSP*STRSEL
Trigger: CAGCTCACTCCTTGTTGACCAGGGAGATAGTAGCAG...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAGTGAGCTGTAACCTGTaGCCAAGACGCTGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKVSCNL*PRRCFK
Trigger: CTTAAAGCAGCGTCTTGGCCACAGGTTACAGCTCAC...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCGTGAGCTGTAACCTGTaGCCAAGACGCTGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSVSCNL*PRRCFK
Trigger: CTTAAAGCAGCGTCTTGGCCACAGGTTACAGCTCAC...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACCGCTGTGGTTCCTCTaGTACTCGATTGGCGATGTC +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRPLWFL*YSIGDV
Trigger: GACATCGCCAATCGAGTACCAGAGGAACCACAGCGG...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGGAGAAGGGACCGCGCTaGAGAGCGGCGAGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQEKGPR*RAASSA
Trigger: CGCTGAACTCGCCGCTCTCCAGCGCGGTCCCTTCTC...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTGTTCTGCTGGTTGCTaGCCAGAATTTGAACGACCT +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPCSAGC*PEFERP
Trigger: AGGTCGTTCAAATTCTGGCCAGCAACCAGCAGAACA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTCAGCTGCGGGGCACTaGTCAGTGGCGGCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQSAAGH*SVAARN
Trigger: GTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGA...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCAGCTGCGGGGCACTaGTCAGTGGCGGCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPSAAGH*SVAARN
Trigger: GTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAATGACTGCACTGGTGTaGCCCAGGACAAAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRMTALV*PRTKPG
Trigger: TCCAGGCTTTGTCCTGGGCCACACCAGTGCAGTCAT...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCATGGAATGACGAATTCTaGGGGAACGTCATAAATGTA +
Preference number: 4 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSWNDEF*GNVINV
Trigger: TACATTTATGACGTTCCCCCAGAATTCGTCATTCCA...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACTAGGACCCTCAGGCTaGCCGACGATGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKLGPSG*PTMRLN
Trigger: GTTCAGCCTCATCGTCGGCCAGCCTGAGGGTCCTAG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGAACTACGCCAGTTTATaGCTCAAGACCCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKNYASL*LKTQVS
Trigger: AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTT...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATTCTGTAGAGTGCCGCTaGGCATCAGGAACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNSVECR*ASGTWE
Trigger: CTCCCAGGTTCCTGATGCCCAGCGGCACTCTACAGA...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAATGTCCACGATCACCGTaGAGCCACGCTTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKCPRSP*SHACRP
Trigger: AGGTCTGCAAGCGTGGCTTCACGGTGATCGTGGACA...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp TCAGGGCCCTTCCAGGTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAACTCAGGAGTTAGCTaGGAAGGATCAACTACTTTG +
Preference number: 4 (lower is better)
Translates to: SGPFQVIEALGRPQTRHLNSGVS*EGSTTL
Trigger: CAAAGTAGTTGATCCTTCTCAGCTAACTCCTGAGTT...TAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAACTTGCCCTTGGTGGATaGCGTCAAAAGTCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKLALGG*RQKSSC
Trigger: ACAACTTGACTTTTGACGTCATCCACCAAGGGCAAG...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCAGGCCTGGACCTCATTaGCATACTGCAGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSRPGPH*HTAEDL
Trigger: AAGATCTTCTGCAGTATGTCAATGAGGTCCAGGCCT...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATACCTGCAGCGCGCTCTaGTGTGTTTTCTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNTCSAL*CVFSMA
Trigger: TGCCATTGAGAAAACACATCAGAGCGCGCTGCAGGT...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp ATCCTCCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTGTTCTGAGACGTCCGTaGGGCGATGGAAATCGTATC +
Preference number: 4 (lower is better)
Translates to: ILLHCRVIVCHQHGGDVAVLRRP*GDGNRI
Trigger: GATACGATTTCCATCGCCTCACGGACGTCTCAGAAC...AGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TCCTTGGTAGACGTTGATCTCATCCTCCTTCACTGCCGTGTAATCGTGTGTCACTGCTGTTGCAAGCGGTaGAGTCATGGATCACCACTG +
Preference number: 4 (lower is better)
Translates to: SLVDVDLILLHCRVIVCHCCCKR*SHGSPL
Trigger: CAGTGGTGATCCATGACTTCACCGCTTGCAACAGCA...GTGACACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGCCGGGTTCTCCACGATaGCTGCACTGGTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSPGSPR*LHWCGP
Trigger: TGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGG...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTCAGATACCTTGTTGCTaGGTCCTTCCCGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGQIPCC*VLPVTS
Trigger: GGAAGTCACGGGAAGGACTCAGCAACAAGGTATCTG...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAAAATGTAGTTGGGATTaGGAAGCTTCACAGATACCT +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQKCSWD*EASQIP
Trigger: AGGTATCTGTGAAGCTTCTCAATCCCAACTACATTT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGATTCAGATTAACAGCTaGTTGGCAGGTGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVIQINS*LAGERE
Trigger: TTCTCTTTCACCTGCCAATCAGCTGTTAATCTGAAT...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCGAACATACCGGCAGCTaGTCAGTTATGTTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTEHTGS*SVMFAC
Trigger: ACAAGCAAACATAACTGATCAGCTGCCGGTATGTTC...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp ATCCTCCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTGTGTCCAAGCACTGCTaGGCACAGCTCACTTGGAAT +
Preference number: 4 (lower is better)
Translates to: ILLHCRVIVCHQHGGDVAVSKHC*AQLTWN
Trigger: ATTCCAAGTGAGCTGTGCTCAGCAGTGCTTGGACAC...AGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATAGGTGGGTAGGACAGTaGGGAAGCAGGAAACAGAGG +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADRWVGQ*GSRKQR
Trigger: CCTCTGTTTCCTGCTTCCTCACTGTCCTACCCACCT...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCCGCTCATCCAGGGCTaGCGCAAACGCCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHPLIQG*RKRLPL
Trigger: GAGTGGAAGGCGTTTGCGGCAGCCCTGGATGAGCGG...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAACATGTCCAGCAAGGTaGTCCGCTCATCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKTCPAR*SAHPGL
Trigger: CAGCCCTGGATGAGCGGAGCACCTTGCTGGACATGT...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TCAGGGCCCTTCCAGGTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAACCATGAATCCACGTTaGTCATATACTTTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SGPFQVIEALGRPQTRHLTMNPR*SYTFRP
Trigger: AGGCCGAAAAGTATATGAGCAACGTGGATTCATGGT...TAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCATGACGTTTCTGCAATaGTCTGGCCCGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSMTFLQ*SGPMKR
Trigger: TCTCTTCATCGGGCCAGAGCATTGCAGAAACGTCAT...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGGTGTATGTGTTCTGTaGCACTTCTTCAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQGVCVL*HFFKIF
Trigger: GAAGATTTTGAAGAAGTGGCACAGAACACATACACC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGCGCAGCTGCACGCACTaGTCCAGGTGTTTCCGATGC +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWRSCTH*SRCFRC
Trigger: GCATCGGAAACACCTGGAGCAGTGCGTGCAGCTGCG...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATGCAGGTGGCGCAGCTaGACGCACTGCTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSICRWRS*THCSRC
Trigger: ACACCTGGAGCAGTGCGTGCAGCTGCGCCACCTGCA...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGACATGGACTCTCCGTTaGGGATCCAACCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGTWTLR*GSNPAP
Trigger: AGGTGCTGGGTTGGATCCGCAACGGAGAGTCCATGT...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACATCTGCCGCATGGGCATaGCCTTTTTCACAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTSAAWA*PFSQKP
Trigger: TGGCTTTTGTGAAAAAGGGCATGCCCATGCGGCAGA...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCATGACTTCGCGGATATaGTTTATCCAGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTMTSRI*FIQSCL
Trigger: CAAGCAGGACTGGATAAAGCATATCCGCGAAGTCAT...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCCTTGGTAGACGTTGATCTCATCCTCCTTCACTGCCGTGTAATCGTGTGTCACTGCCCTCCATTTCCATaGTACTTCTGGAGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: SLVDVDLILLHCRVIVCHCPPFP*YFWSGR
Trigger: TCGCCCACTCCAGAAGTAGCATGGAAATGGAGGGCA...GTGACACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTGCCCTCCATTTCCATaGTACTTCTGGAGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICCPPFP*YFWSGR
Trigger: TCGCCCACTCCAGAAGTAGCATGGAAATGGAGGGCA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCCTCCAGTGCCATCTTaGTTTTCACGAGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSPPVPS*FSRVPQ
Trigger: TTGAGGAACTCGTGAAAAGCAAGATGGCACTGGAGG...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTCGTTCATCATGTCGTTaGACCGCCTGGGTACTATGC +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSRSSCR*TAWVLC
Trigger: GCATAGTACCCAGGCGGTGCAACGACATGATGAACG...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAGGTCACTGTAGGAGATaGTGTAGTGACCATCGTTGT +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGGHCRR*CSDHRC
Trigger: ACAACGATGGTCACTACAGCATCTCCTACAGTGACC...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTCGATGCACGTGTAGATaGCGTCATCTTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSRCTCR*RHLPWS
Trigger: TGACCACGGAAGATGACGGCATCTACACGTGCATCG...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCCCGGAAACGTTAAAATaGGACCTCCACGTTTATCTC +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTPETLK*DLHVYL
Trigger: GAGATAAACGTGGAGGTCCCATTTTAACGTTTCCGG...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTGGCATGAGGGTGGCTaGTCCCAATCTCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADWHEGG*SQSLCS
Trigger: GCTACACAGAGATTGGGACCAGCCACCCTCATGCCA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGTGGTGCAGCACCTCGTaGATGACATCCAGGACATGG +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGWCSTS*MTSRTW
Trigger: CCATGTCCTGGATGTCATCCACGAGGTGCTGCACCA...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTCCAGCTGCCGCTGGTaGTGCAGCACCTCGTGGATG +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQSSCRW*CSTSWM
Trigger: CATCCACGAGGTGCTGCACCACCAGCGGCAGCTGGA...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATTCCAGCTGCCGCTGGTaGTGCAGCACCTCGTGGATG +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHSSCRW*CSTSWM
Trigger: CATCCACGAGGTGCTGCACCACCAGCGGCAGCTGGA...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGTTGTCTGCATGGTGCTaGAGGCGCTGCTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVLSAWC*RRCSAI
Trigger: GATTGCAGAGCAGCGCCTCCAGCACCATGCAGACAA...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAAAGTCAAGTTGTTCATaGTCAAGGCTTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQKSSCS*SRLCLH
Trigger: ATGCAGACAAAGCCTTGACCATGAACAACTTGACTT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGAGATCTTGCCCTTGGTaGATGACGTCAAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKRSCPW*MTSKVK
Trigger: CTTGACTTTTGACGTCATCCACCAAGGGCAAGATCT...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGAGATCTTGCCCTTGGTaGATGACGTCAAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLRSCPW*MTSKVK
Trigger: CTTGACTTTTGACGTCATCCACCAAGGGCAAGATCT...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGACTTCTGCCTGCAGGTaGCGCAGCTGCACGCACTGC +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSTSACR*RSCTHC
Trigger: GCAGTGCGTGCAGCTGCGCCACCTGCAGGCAGAAGT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGGGTTGGCCTGTAGCATaGCTTCTGCCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGGWPVA*LLPSAA
Trigger: TGCAGCAGAAGGCAGAAGCCATGCTACAGGCCAACC...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ATGGTTGGCTTGGCTAAACTCTCATCCACCAGGATATTCTCAGGCTTTAGGTCCGGTTGGCCTGTAGCATaGCTTCTGCCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: MVGLAKLSSTRIFSGFRSGWPVA*LLPSAA
Trigger: TGCAGCAGAAGGCAGAAGCCATGCTACAGGCCAACC...GGACCTAAAGCCTGAGAATATCCTGGTGGATGAGAGTTTAGCCAAGCCAACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCATTCCAAAGCCTGCTTaGCACTCCTCTCAAAGACCA +
Preference number: 4 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSIPKPA*HSSQRP
Trigger: TGGTCTTTGAGAGGAGTGCCAAGCAGGCTTTGGAAT...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGGGGTGTGCTGTATACTaGAGCCCGTGGAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLGCAVY*SPWRCV
Trigger: CACACACCTCCACGGGCTCCAGTATACAGCACACCC...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTGCTTTGCAGTTATCTaGAACTCCTCGTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPCFAVI*NSSCSF
Trigger: GAAAGAGCACGAGGAGTTCCAGATAACTGCAAAGCA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGAAATCGTATCAGGCTaGCTGCTGCCGTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNEIVSG*LLPSPW
Trigger: CCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTC...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGACGTCCGTGAGGCGATaGAAATCGTATCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVTSVRR*KSYQAG
Trigger: GCCAGCCTGATACGATTTCCATCGCCTCACGGACGT...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAGAGAGCGAGTCTTTGTaGTTGAAGATGCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKESESL*LKMPSI
Trigger: AATGGAGGGCATCTTCAACCACAAAGACTCGCTCTC...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTGAGAGCGAGTCTTTGTaGTTGAAGATGCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSESESL*LKMPSI
Trigger: AATGGAGGGCATCTTCAACCACAAAGACTCGCTCTC...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGTCGGTGTTTCGGAGCTaGTGGGGCGGACTAATAACC +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVSVFRS*WGGLIT
Trigger: GGTTATTAGTCCGCCCCACCAGCTCCGAAACACCGA...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGCTTCCATCTCATCAATaGGCGAGGAGGAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGLPSHQ*ARRKRE
Trigger: TTCTCTCTTCCTCCTCGCCCATTGATGAGATGGAAG...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCAGAAGTCCTGCATCTTaGTCTGTGACCAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPRSPAS*SVTKNV
Trigger: CACATTCTTGGTCACAGACCAAGATGCAGGACTTCT...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGCTTCTTTTTATCAAGTaGTTCGCTGAATATGACGAT +
Preference number: 4 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSELLFIK*FAEYDD
Trigger: ATCGTCATATTCAGCGAACCACTTGATAAAAAGAAG...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGACAGGAATCCCGGCATaGAGAAGCCCTTCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKTGIPA*RSPSFY
Trigger: ATAAAAAGAAGGGCTTCTCCATGCCGGGATTCCTGT...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGCCGCTGTGGTTCCTCTaGTACTCGATTGGCGATGTC +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVPLWFL*YSIGDV
Trigger: GACATCGCCAATCGAGTACCAGAGGAACCACAGCGG...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCCGCCGCCCCCGCTGTaGTTCCTCTGGTACTCGATT +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEPPPPL*FLWYSI
Trigger: AATCGAGTACCAGAGGAACCACAGCGGGGGCGGCGG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATACCGCCGCCCCCGCTGTaGTTCCTCTGGTACTCGATT +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIPPPPL*FLWYSI
Trigger: AATCGAGTACCAGAGGAACCACAGCGGGGGCGGCGG...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATGGAATGACGAATTCTaGGGGAACGTCATAAATGTA +
Preference number: 4 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQWNDEF*GNVINV
Trigger: TACATTTATGACGTTCCCCCAGAATTCGTCATTCCA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTTGCCGTCATCTTCCGTaGTCACGCCCACAATCTTCA +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSCRHLP*SRPQSS
Trigger: TGAAGATTGTGGGCGTGACCACGGAAGATGACGGCA...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGATGGCCACTGCTCGCTTaGTTCCTTTCTGATCACATT +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGWPLLA*FLSDHI
Trigger: AATGTGATCAGAAAGGAACCAAGCGAGCAGTGGCCA...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATAGCTCATGGGTGACCTaGTCGCGCTTCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNSSWVT*SRFINF
Trigger: GAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGAGGATGCCAAGCTCATaGGTGACCTGGTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLRMPSS*VTWSRF
Trigger: GAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAACAAGGCCATGGGAGTaGCCGCCACCTAGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSTRPWE*PPPRCV
Trigger: GACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGT...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCAACTACGCCAGTTTATaGCTCAAGACCCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSNYASL*LKTQVS
Trigger: AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTT...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
3UTR CAA 72 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTaGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINF*FTNLVATARLV
Trigger: AACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACTGCTCTGTATCCTCTaGAGCAGCTTCTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKLLCIL*SSFCPS
Trigger: GGAGGGACAGAAGCTGCTTCAGAGGATACAGAGCAG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTCTGCTCTGTATCCTCTaGAGCAGCTTCTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGLLCIL*SSFCPS
Trigger: GGAGGGACAGAAGCTGCTTCAGAGGATACAGAGCAG...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGCACTCCTGCTCCAGCTaGCTCGCGATCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSHSCSS*LAICLI
Trigger: GATCAGGCAGATCGCGAGTCAGCTGGAGCAGGAGTG...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAATGCTCTGGCCCGATaGAGAGATTTCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNNALAR*RDFPTP
Trigger: AGGTGTGGGGAAATCTCTTCATCGGGCCAGAGCATT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATCCAAGACTCGAGGTCTaGGATAATGTCGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNPRLEV*DNVDGV
Trigger: GACGCCATCGACATTATCTCAGACCTCGAGTCTTGG...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTGCTGCTCTGCAATCGTaGGATCTTCTGTGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGAALQS*DLLCRS
Trigger: ACTTCGACACAGAAGATCTCACGATTGCAGAGCAGC...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCGCTGCTCTGCAATCGTaGGATCTTCTGTGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICAALQS*DLLCRS
Trigger: ACTTCGACACAGAAGATCTCACGATTGCAGAGCAGC...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACCTTGCCCTTGGTGGATaGCGTCAAAAGTCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDLALGG*RQKSSC
Trigger: ACAACTTGACTTTTGACGTCATCCACCAAGGGCAAG...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGCTGCAGACCTGCTCTaGGGTTTTGTAGAAAGCGAC +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNAADLL*GFVESD
Trigger: GTCGCTTTCTACAAAACCTCAGAGCAGGTCTGCAGC...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATGCTCCAGGTGCTTGCTaGTCATGGGCGTCACGTGGT +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHAPGAC*SWASRG
Trigger: ACCACGTGACGCCCATGATCAGCAAGCACCTGGAGC...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGGGATACTGGCTGGAATaGTATCTAGCTGGAGACTTT +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGGYWLE*YLAGDF
Trigger: AAAGTCTCCAGCTAGATATCATTCCAGCCAGTATCC...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTGGATACTGGCTGGAATaGTATCTAGCTGGAGACTTT +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSGYWLE*YLAGDF
Trigger: AAAGTCTCCAGCTAGATATCATTCCAGCCAGTATCC...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTCGTCCGCTCCTGGATaGCTTCGCGGATATGCTTTA +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADSSAPG*LRGYAL
Trigger: TAAAGCATATCCGCGAAGTCATCCAGGAGCGGACGA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGGCGGTCTTAGGGATGTaGATGGGCTCCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PALQKVFNATDRSNIILVAVLGM*MGSFRA
Trigger: AGCCCTGAAGGAGCCCATTCACATCCCTAAGACCGC...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCCTGTCCAGCGTGTTCTaGGACGTCCGTGAGGCGATG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSLSSVF*DVREAM
Trigger: CATCGCCTCACGGACGTCTCAGAACACGCTGGACAG...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAATTATCCGAAGGGTTaGAGGAAGGGCTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGNYPKG*RKGCYY
Trigger: ATAGTAGCAGCCCTTCCTTCAACCCTTCGGATAATT...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACTGCATCTTGGTCTGTaGCCAAGAATGTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRLHLGL*PRMCPA
Trigger: TGCAGGACACATTCTTGGTCACAGACCAAGATGCAG...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTCTGAACCCATGTCATTaGCAGCGATGCACGTGTAGA +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGLNPCH*QRCTCR
Trigger: TCTACACGTGCATCGCTGTCAATGACATGGGTTCAG...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAATTGGGCAAGAGGTTCTaGAGGTCCGCATTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKLGKRF*RSALPE
Trigger: CTCAGGCAATGCGGACCTGCAGAACCTCTTGCCCAA...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTTTGGGCAAGAGGTTCTaGAGGTCCGCATTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGLGKRF*RSALPE
Trigger: CTCAGGCAATGCGGACCTGCAGAACCTCTTGCCCAA...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGTCAGGGAATCGGAGCTaGCGGGAGTCAAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWESGNRS*RESRAA
Trigger: AGCGGCCCTTGACTCCCGGCAGCTCCGATTCCCTGA...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAAGCTGCCGCTGGTGGTaGAGCACCTCGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSSCRWW*STSWMT
Trigger: TGTCATCCACGAGGTGCTGCACCACCAGCGGCAGCT...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAGATGCAGCCGGACCTTaGGGTGTTGCCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKDAAGP*GVARCS
Trigger: AGAACATCTGGCAACACCGCAAGGTCCGGCTGCATC...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGATGCAGCCGGACCTTaGGGTGTTGCCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGDAAGP*GVARCS
Trigger: AGAACATCTGGCAACACCGCAAGGTCCGGCTGCATC...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTCCACACCTGTATGTTTaGTCAGAAATGCTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSPHLYV*SEMLLR
Trigger: ACGGAGAAGCATTTCTGAGCAAACATACAGGTGTGG...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATTCCAGCAGCTCCTTCTaGAGCTCCTCCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHSSSSF*SSSSHV
Trigger: GACGTGGCTGGAGGAGCTGCAGAAGGAGCTGCTGGA...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCATGCAGGGTGGTCTGCTaGTGCTGGCCAAAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSCRVVC*CWPKRL
Trigger: CAAGCGCTTTGGCCAGCAGCAGCAGACCACCCTGCA...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp CTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGTTGCGCCTCGTCCAGCTaGTGCAGCACCGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: LLCRKFLMLRIGRTSFWCCASSS*CSTVSM
Trigger: CATTGAGACGGTGCTGCAGCAGCTGGACGAGGCGCA...ACACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATCTGGAGGCGCTGCTCTaGAATCGTGAGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNLEALL*NREIFC
Trigger: ACAGAAGATCTCACGATTGCAGAGCAGCGCCTCCAG...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACAGGTGTTTCCGATGCTaGTCTGCGGCTAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDRCFRC*SAAKSN
Trigger: ATTGGATTTAGCCGCAGAGCAGCATCGGAAACACCT...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGCGCAGCTGCACGCACTaGTCCAGGTGTTTCCGATGC +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQRSCTH*SRCFRC
Trigger: GCATCGGAAACACCTGGAGCAGTGCGTGCAGCTGCG...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAATGGCTTCTGCCTTCTaGTGCACCTGCAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIMASAF*CTCSAL
Trigger: GAGCGCGCTGCAGGTGCAGCAGAAGGCAGAAGCCAT...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTTCCTTCTGCTCCAGGTaGTTGCTGATCATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGSFCSR*LLIMGV
Trigger: GACGCCCATGATCAGCAAGCACCTGGAGCAGAAGGA...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCTCCTTCTGCTCCAGGTaGTTGCTGATCATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: HCSLGSFLITFLNDRESASFCSR*LLIMGV
Trigger: GACGCCCATGATCAGCAAGCACCTGGAGCAGAAGGA...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAGGAATGCCTCCTTCTaGTCCAGGTGCTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGRNASF*SRCLLI
Trigger: GATCAGCAAGCACCTGGAGCAGAAGGAGGCATTCCT...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTTTCAGGAAGACGTCTaGATTCCTCCGAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICFQEDV*IPPSKG
Trigger: ACCCTTGCTCGGAGGAATGCAGACGTCTTCCTGAAA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCAGGGCCCTTCCAGGTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAGTTCTTTGTTTACAATaGCAGGTGGAATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SGPFQVIEALGRPQTRHLVLCLQ*QVESLP
Trigger: TGGAAGAGATTCCACCTGGCATTGTAAACAAAGAAC...TAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGTCGTATCAGGCTGGCTaGTGCCGTCTCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWSYQAG*CRLLGC
Trigger: ACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGA...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGATGTTGCTACTGCTaGTGCTTTCACTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICRCCYC*CFHSRC
Trigger: GCAACGGGAGTGAAAGCAGCAGCAGTAGCAACATCT...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACACATGTTCTGCTGGTTaGTGGCCAGAATTTGAACGA +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNTCSAG*WPEFER
Trigger: TCGTTCAAATTCTGGCCAGCAACCAGCAGAACATGT...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATCGATGCACGTGTAGATaGCGTCATCTTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADRCTCR*RHLPWS
Trigger: TGACCACGGAAGATGACGGCATCTACACGTGCATCG...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACAGAGAATCTGCCCCTaGCAAGCTCAGCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKQRICP*QAQPLH
Trigger: GTGAAGTGGCTGAGCTTGGCAGGGGCAGATTCTCTG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACCAGGTGTGCTATCCTaGAGTTGTGCAGGTACCGGA +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKPGVLS*SCAGTG
Trigger: TCCGGTACCTGCACAACTGCAGGATAGCACACCTGG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATACTGTGATACAGCAATaGGACCTCTGCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADTVIQQ*DLCLGQ
Trigger: CTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGT...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACCGCGGGGCGGCCAGTaGTTAATCGGCTTTTATTTC +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKPRGGQ*LIGFYF
Trigger: GAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACACCAGTGCGAATGCTaGCACAGTGACTCGGGCATT +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKHQCEC*HSDSGI
Trigger: AATGCCCGAGTCACTGTGGCAGCATTCGCACTGGTG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR GCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCACCACACCAGTGCGAATaGTGCCACAGTGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSPHQCE*CHSDSG
Trigger: GCCCGAGTCACTGTGGCAGCATTCGCACTGGTGTGG...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTTACTTTTCGGCCTTCTaGTGGAAAATGGAGGACATG +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSYFSAF*WKMEDM
Trigger: CATGTCCTCCATTTTCCACCAGAAGGCCGAAAAGTA...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACACTTCTGCCTGCAGGTaGCGCAGCTGCACGCACTGC +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNTSACR*RSCTHC
Trigger: GCAGTGCGTGCAGCTGCGCCACCTGCAGGCAGAAGT...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCACCCTGTTCTCCCGTTaGAAGAGTTCATTCAAGATA +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPTLFSR*KSSFKI
Trigger: TATCTTGAATGAACTCTTCCAACGGGAGAACAGGGT...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGGGGTGTGCTGTATACTaGAGCCCGTGGAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWGCAVY*SPWRCV
Trigger: CACACACCTCCACGGGCTCCAGTATACAGCACACCC...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGTTTATCTCTGCCGCATaGGCATGCCCTTTTTCACAA +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGFISAA*ACPFSQ
Trigger: TTGTGAAAAAGGGCATGCCCATGCGGCAGAGATAAA...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCAGGAAGAAATGGAATTaGCTAATCCATGTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPRKKWN*LIHVAA
Trigger: AGCAGCGACATGGATTAGCCAATTCCATTTCTTCCT...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAGGGCTCCCTTCAGGTaGATCGTCCGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSRAPFR*IVRSWM
Trigger: CATCCAGGAGCGGACGATCCACCTGAAGGGAGCCCT...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAGAAATCGTATCAGGCTaGCTGCTGCCGTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKEIVSG*LLPSPW
Trigger: CCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTC...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAAGAACTTCCACGGTCTaGCCCCGTCGGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSRTSTV*PRRMVS
Trigger: GCTGACCATCCGACGGGGCCAGACCGTGGAAGTTCT...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAAGAACTTCCACGGTCTaGCCCCGTCGGATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPRTSTV*PRRMVS
Trigger: GCTGACCATCCGACGGGGCCAGACCGTGGAAGTTCT...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCGAGGAGGAGGATTTaGAGAGAGTACCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HCSLGSFLITFLNDRESAPRRRI*REYRCS
Trigger: TGAGCAGCGGTACTCTCTCCAAATCCTCCTCCTCGG...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGCTGCTGGATGGCCATaGGTGGCGGCAGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRAAGWP*VAAGAR
Trigger: CCGTGCCCCTGCCGCCACCCATGGCCATCCAGCAGC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAGTGTTTCGGAGCTGGTaGGGCGGACTAATAACCGAG +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKVFRSW*GGLITE
Trigger: CTCGGTTATTAGTCCGCCCCACCAGCTCCGAAACAC...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGCAACAAGGAGTGAGCTaGGGCGATCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWQQGVS*GDPPVP
Trigger: TGGCACTGGAGGATCGCCCCAGCTCACTCCTTGTTG...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCAGAAGTCCTGCATCTTaGTCTGTGACCAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSRSPAS*SVTKNV
Trigger: CACATTCTTGGTCACAGACCAAGATGCAGGACTTCT...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGACGGGGTGTCTGCCGCTaGAGGGAGTCGCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRRGVCR*RESLSP
Trigger: GGGGGACAGCGACTCCCTCCAGCGGCAGACACCCCG...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGTGCCGTCATCTTCCGTaGTCACGCCCACAATCTTCA +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVCRHLP*SRPQSS
Trigger: TGAAGATTGTGGGCGTGACCACGGAAGATGACGGCA...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATACTAGGACCCTCAGGCTaGCCGACGATGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSILGPSG*PTMRLN
Trigger: GTTCAGCCTCATCGTCGGCCAGCCTGAGGGTCCTAG...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGTTTATCTCTCCCACCTaGAAGGTATGCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKFISPT*KVCNFF
Trigger: GAAAAAGTTGCATACCTTTCAGGTGGGAGAGATAAA...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGTCTTCAGAAGGGGCTTaGTGGAGTCCCACTTGGACC +
Preference number: 4 (lower is better)
Translates to: PALQKVFNATDRSNIILVSSEGA*WSPTWT
Trigger: GGTCCAAGTGGGACTCCATCAAGCCCCTTCTGAAGA...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAAACTCAGGAGTTAGCTaGGAAGGATCAACTACTTTG +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKNSGVS*EGSTTL
Trigger: CAAAGTAGTTGATCCTTCTCAGCTAACTCCTGAGTT...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTTTAGCTAGGATGTCCTaGAGTTCCTCCAGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGLARMS*SSSSRD
Trigger: GTCTCGGCTGGAGGAACTTCAGGACATCCTAGCTAA...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAGACTCGCGATCTGCCTaGTCTGCTGCGAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPDSRSA*SAARHS
Trigger: ACTATGCCTCGCAGCAGATCAGGCAGATCGCGAGTC...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACGCAAGCTTTACACCATaGATCCACGTTGCTCATATA +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNASFTP*IHVAHI
Trigger: TATATGAGCAACGTGGATTCATGGTGTAAAGCTTGC...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATACTTCCCATCTTGGCTaGCCTCAGAATAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNTSHLG*PQNKQE
Trigger: CTCTTGCTTATTCTGAGGTCAGCCAAGATGGGAAGT...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAACTTCCCATCTTGGCTaGCCTCAGAATAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRTSHLG*PQNKQE
Trigger: CTCTTGCTTATTCTGAGGTCAGCCAAGATGGGAAGT...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAGCAGCACCTCGTGGATaGCATCCAGGACATGGTGCA +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPAAPRG*HPGHGA
Trigger: TGCACCATGTCCTGGATGTCATCCACGAGGTGCTGC...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp ATCCTCCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTTCTTTCACATGGGTGTaGAAGGACACTGACATGTCC +
Preference number: 4 (lower is better)
Translates to: ILLHCRVIVCHQHGGDVASFTWV*KDTDMS
Trigger: GGACATGTCAGTGTCCTTTCACACCCATGTGAAAGA...AGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACCAAGACTCGAGGTCTaGGATAATGTCGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKPRLEV*DNVDGV
Trigger: GACGCCATCGACATTATCTCAGACCTCGAGTCTTGG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAAAGACCACGTACTGCTaGCACTGGTCCAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPKTTYC*HWSSRL
Trigger: GAGACGGCTGGACCAGTGTCAGCAGTACGTGGTCTT...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAAGGATTCCTGTAGGATaGGTTCTCCCTGAGACTCAA +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRRIPVG*VLPETQ
Trigger: TTGAGTCTCAGGGAGAACTCATCCTACAGGAATCCT...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAATCGTCCGCTCCTGGATaGCTTCGCGGATATGCTTTA +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKSSAPG*LRGYAL
Trigger: TAAAGCATATCCGCGAAGTCATCCAGGAGCGGACGA...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCGTTCCTCAATTGCACTaGCGAGCTCGGCTGCACTCG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSVPQLH*RARLHS
Trigger: CGAGTGCAGCCGAGCTCGTCAGTGCAATTGAGGAAC...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCGAATGCTGCCACAGTaGCTCGGGCATTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSERMLPQ*LGHWVP
Trigger: TGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCACCAGCCTCCTTGAGTTaGAAGGACTCCCCACACCAG +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSPASLS*KDSPHQ
Trigger: CTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGG...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATTCTGCAGGTCCGCATTaGCTGAGCCTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNSAGPH*LSLSSF
Trigger: AAAAGAACTCAGGCTCAGGCAATGCGGACCTGCAGA...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGTTGGGCAAGAGGTTCTaGAGGTCCGCATTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWLGKRF*RSALPE
Trigger: CTCAGGCAATGCGGACCTGCAGAACCTCTTGCCCAA...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGCTGCCGTGTCGAGTaGAGCCGGTCCAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDCCRVE*SRSSMV
Trigger: CACCATGCTGGACCGGCTGCACTCGACACGGCAGCA...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGCATCTTCTAGGTCCTaGAGCTCTGAGGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGASSRS*SSEGRS
Trigger: AGACCTTCCCTCAGAGCTGCAGGACCTAGAAGATGC...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCATGTTTGCTCAGAAATaGTTCTCCGTGGTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSMFAQK*FSVVLD
Trigger: ATCGAGAACCACGGAGAAGCATTTCTGAGCAAACAT...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTATGACGTTTCTGCAATaGTCTGGCCCGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGMTFLQ*SGPMKR
Trigger: TCTCTTCATCGGGCCAGAGCATTGCAGAAACGTCAT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTAGTAGGATCTTTCGCTaGTCAACACGCCGAACGAAA +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSSRIFR*STRRTK
Trigger: TTTCGTTCGGCGTGTTGAGCAGCGAAAGATCCTACT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATCGCTTGATGAGGTCCTaGACGGCCTCCACCGACTCG +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDRLMRS*TASTDS
Trigger: CGAGTCGGTGGAGGCCGTGCAGGACCTCATCAAGCG...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGCAGGGTGGTCTGCTaGTGCTGGCCAAAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNCRVVC*CWPKRL
Trigger: CAAGCGCTTTGGCCAGCAGCAGCAGACCACCCTGCA...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACGCAGAGTCCCTGAGCTaGTGGATGAGGTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNAESLS*WMRSSP
Trigger: AGGGGAGGACCTCATCCAGCAGCTCAGGGACTCTGC...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGCCTCGTCCAGCTGCTaGAGCACCGTCTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWEASSSC*STVSMW
Trigger: CCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGC...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAACTGGAGGCGCTGCTCTaGAATCGTGAGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKLEALL*NREIFC
Trigger: ACAGAAGATCTCACGATTGCAGAGCAGCGCCTCCAG...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCTGGAGGCGCTGCTCTaGAATCGTGAGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: HCSLGSFLITFLNDRESALEALL*NREIFC
Trigger: ACAGAAGATCTCACGATTGCAGAGCAGCGCCTCCAG...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAGGTCAAGGCTTTGTCTaGATGGTGCTGGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIGQGFV*MVLEAL
Trigger: CAGCGCCTCCAGCACCATGCAGACAAAGCCTTGACC...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp ATGGTTGGCTTGGCTAAACTCTCATCCACCAGGATATTCTCAGGCTTTAGGTCCGTCCTGGACCCGAGTTaGCATGTCTACATCTCTATC +
Preference number: 4 (lower is better)
Translates to: MVGLAKLSSTRIFSGFRSVLDPS*HVYISI
Trigger: GATAGAGATGTAGACATGGCAACTCGGGTCCAGGAC...GGACCTAAAGCCTGAGAATATCCTGGTGGATGAGAGTTTAGCCAAGCCAACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACCGCAGCTGCACGCACTaGTCCAGGTGTTTCCGATGC +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNRSCTH*SRCFRC
Trigger: GCATCGGAAACACCTGGAGCAGTGCGTGCAGCTGCG...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCTGTTTCACTTCTGCCTaGAGGTGGCGCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSCFTSA*RWRSCT
Trigger: CGTGCAGCTGCGCCACCTGCAGGCAGAAGTGAAACA...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAATCTGGAACTCCTCGTaGTCTTTCAGGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKIWNSS*SFRSSW
Trigger: CCAGGAGCTCCTGAAAGAGCACGAGGAGTTCCAGAT...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGATCTGGAACTCCTCGTaGTCTTTCAGGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLIWNSS*SFRSSW
Trigger: CCAGGAGCTCCTGAAAGAGCACGAGGAGTTCCAGAT...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAACTCTTTGGTTTGCTTTaGAGTTATCTGGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKLFGLL*SYLELL
Trigger: GAGGAGTTCCAGATAACTGCAAAGCAAACCAAAGAG...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTCTCTTTGGTTTGCTTTaGAGTTATCTGGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSLFGLL*SYLELL
Trigger: GAGGAGTTCCAGATAACTGCAAAGCAAACCAAAGAG...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCATATCAGGCTGGCTGCTaGCGTCTCCTTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSYQAGC*RLLGCP
Trigger: TGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATA...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGCAGTCAGGCTTGTCATaGGGCCGCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSQSGLS*GRSRTS
Trigger: GGAAGTTCTGGAGCGGCCGCATGACAAGCCTGACTG...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGACTGACGAGCTCGGCTaGACTCGGTGTTTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSTDELG*TRCFGA
Trigger: AGCTCCGAAACACCGAGTGCAGCCGAGCTCGTCAGT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCTTCCCGTCGAATCCTTaGAGCCGCCCCACGTTCATC +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSFPSNP*SRPTFI
Trigger: GATGAACGTGGGGCGGCTGCAAGGATTCGACGGGAA...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCGCGAGGCAGAAGTCCTaGATCTTGGTCTGTGACCAA +
Preference number: 4 (lower is better)
Translates to: HCSLGSFLITFLNDRESAARQKS*ILVCDQ
Trigger: TTGGTCACAGACCAAGATGCAGGACTTCTGCCTCGC...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCATCTTGTCTGCCTCTaGCTGGCTCGAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHHLVCL*LARGCR
Trigger: TCTGCAGCCTCGAGCCAGGCAGAGGCAGACAAGATG...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAGTTCTCCACGATGACTaGACTGGTGTGGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPVLHDD*TGVAQD
Trigger: GTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAAC...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTAAACTTAGTGGCCACTaGTCGCTTGGTTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSKLSGH*SLGSFL
Trigger: CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGGGCAGAAGCCTGCTCTaGAGAAAGTTTTTAATGCTA +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGGRSLL*RKFLML
Trigger: TAGCATTAAAAACTTTCTGCAGAGCAGGCTTCTGCC...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTGCCATTCTGCACAAATaGCAGTTATTCCCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSAILHK*QLFPVY
Trigger: GTAAACTGGGAATAACTGGCATTTGTGCAGAATGGC...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACTCCAGCTGCCGCTGGTaGTGCAGCACCTCGTGGATG +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNSSCRW*CSTSWM
Trigger: CATCCACGAGGTGCTGCACCACCAGCGGCAGCTGGA...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAACTCCAGCAGGTCCTaGACCCGAGTTGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWNSSRS*TRVAMS
Trigger: AGACATGGCAACTCGGGTCCAGGACCTGCTGGAGTT...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAATTCCAAAGCCTGCTTaGCACTCCTCTCAAAGACCA +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRIPKPA*HSSQRP
Trigger: TGGTCTTTGAGAGGAGTGCCAAGCAGGCTTTGGAAT...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAGTATACTGGAGCCCGTaGAGGTGTGTGTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKVYWSP*RCVWKG
Trigger: ACCTTTCCACACACACCTCCACGGGCTCCAGTATAC...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTTTTGGGTCCCACACTTaGAAGGATTCCTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSFGSHT*KDSCRM
Trigger: CATCCTACAGGAATCCTTCCAAGTGTGGGACCCAAA...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TCCTTGGTAGACGTTGATCTCATCCTCCTTCACTGCCGTGTAATCGTGTGTCACTTTGGGTCCCACACTTaGAAGGATTCCTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: SLVDVDLILLHCRVIVCHFGSHT*KDSCRM
Trigger: CATCCTACAGGAATCCTTCCAAGTGTGGGACCCAAA...GTGACACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTTTGGGTCCCACACTTaGAAGGATTCCTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICFGSHT*KDSCRM
Trigger: CATCCTACAGGAATCCTTCCAAGTGTGGGACCCAAA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCTGCCTTTCCATGCTACTTCTaGAGTGGGCGATGCACAGTG +
Preference number: 4 (lower is better)
Translates to: SLGSFLITFLNDRESAPAFPCYF*SGRCTV
Trigger: CACTGTGCATCGCCCACTCCAGAAGTAGCATGGAAA...GGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTCTTCCATCTCATCAATaGGCGAGGAGGAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGLPSHQ*ARRKRE
Trigger: TTCTCTCTTCCTCCTCGCCCATTGATGAGATGGAAG...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGTTCTCTTTAAAGAGCTaGATTTCCTTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVFSLKS*ISFLPS
Trigger: AGATGGAAGAAAGGAAATCCAGCTCTTTAAAGAGAA...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCCATGATTCTCTGCACTaGTTTGATCAACAGATCTGT +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTHDSLH*FDQQIC
Trigger: ACAGATCTGTTGATCAAACCAGTGCAGAGAATCATG...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAAGAGCAGTTTACCCTaGGCAACGATTTTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNKSSLP*ATIFPS
Trigger: CGACGGGAAAATCGTTGCCCAGGGTAAACTGCTCTT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGATTTGGTTGATTTCATaGATCCAAGTTTGCCGGACA +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLIWLIS*IQVCRT
Trigger: TGTCCGGCAAACTTGGATCCATGAAATCAACCAAAT...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTTGTTCTGCTGGTTGCTaGCCAGAATTTGAACGACCT +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSCSAGC*PEFERP
Trigger: AGGTCGTTCAAATTCTGGCCAGCAACCAGCAGAACA...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATGGTCGAACATCATTCTaGTGTTTGCGCCGCTCAATG +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADGRTSF*CLRRSM
Trigger: CATTGAGCGGCGCAAACACCAGAATGATGTTCGACC...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGATGAGAAAGAACTTCTaGATAGGTCAAACTCTAGGC +
Preference number: 4 (lower is better)
Translates to: RLNARFRSHVGREMHTDEMRKNF*IGQTLG
Trigger: GCCTAGAGTTTGACCTATCCAGAAGTTCTTTCTCAT...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCATGAGAAAGAACTTCTaGATAGGTCAAACTCTAGGC +
Preference number: 4 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTMRKNF*IGQTLG
Trigger: GCCTAGAGTTTGACCTATCCAGAAGTTCTTTCTCAT...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGTTTTCTTGAGGGAATaGTCTTCCCCAGCAGATGAG +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSVFLRE*SSPADE
Trigger: CTCATCTGCTGGGGAAGACCATTCCCTCAAGAAAAC...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344135.5
3UTR CAA 72 bp ACAGCATCTCCAAAGTCAGCCAGTTTGATGGTTGGCTaGGCTAAACTCTCATCCACCAGGATATTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TASPKSASLMVG*AKLSSTRIFSG
Trigger: GCCTGAGAATATCCTGGTGGATGAGAGTTTAGCCAAGCCAACCATCAAACTGGCTGACTTTGGAGATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCCTTTGTTGTGTGTaGTCCAGTCAAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSGLCCV*SSQTSS
Trigger: AGAAGATGTTTGACTGGATCACACACAACAAAGGCC...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCTCTTCAAAATCTTCATaGCGTTTCTGCAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSSSKSS*RFCNAL
Trigger: CAGAGCATTGCAGAAACGTCATGAAGATTTTGAAGA...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAGGCCTGGACCTCATTaGCATACTGCAGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGRPGPH*HTAEDL
Trigger: AAGATCTTCTGCAGTATGTCAATGAGGTCCAGGCCT...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAGGCCTGGACCTCATTaGCATACTGCAGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNRPGPH*HTAEDL
Trigger: AAGATCTTCTGCAGTATGTCAATGAGGTCCAGGCCT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACGCTCCAGGTGCTTGCTaGTCATGGGCGTCACGTGGT +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNAPGAC*SWASRG
Trigger: ACCACGTGACGCCCATGATCAGCAAGCACCTGGAGC...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGGCTGTTCAGGAGCTTTaGTGTGCGTCACCATTCCTG +
Preference number: 4 (lower is better)
Translates to: PALQKVFNATDRSNIILVAVQEL*CASPFL
Trigger: CAGGAATGGTGACGCACATCAAAGCTCCTGAACAGC...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCGAAGTTTCACCTCTaGGCCAGGGATACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPSKFHL*ARDTGW
Trigger: CCAGCCAGTATCCCTGGCTCAGAGGTGAAACTTCGA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCTGCCAGGATTCCTGTAGGATaGGTTCTCCCTGAGACTCAA +
Preference number: 4 (lower is better)
Translates to: SLGSFLITFLNDRESAPARIPVG*VLPETQ
Trigger: TTGAGTCTCAGGGAGAACTCATCCTACAGGAATCCT...GGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGGTTCTGAGACGTCCGTaGGGCGATGGAAATCGTATC +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWVLRRP*GDGNRI
Trigger: GATACGATTTCCATCGCCTCACGGACGTCTCAGAAC...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAAATTATCCGAAGGGTTaGAGGAAGGGCTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRNYPKG*RKGCYY
Trigger: ATAGTAGCAGCCCTTCCTTCAACCCTTCGGATAATT...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAGGTATCAATGTATTCTaGGACAATGTGCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKGINVF*DNVLRL
Trigger: AAGTCTGAGCACATTGTCTCAGAATACATTGATACC...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR TCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGGCTGAGTCCTTCCCGTaGCTTCCGATAACCGTTCTC +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEAESFP*LPITVL
Trigger: GAGAACGGTTATCGGAAGTCACGGGAAGGACTCAGC...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGCAGATACCTTGTTGCTaGGTCCTTCCCGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: PALQKVFNATDRSNIILVQIPCC*VLPVTS
Trigger: GGAAGTCACGGGAAGGACTCAGCAACAAGGTATCTG...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCCTTTCCAGGTCACCATaGTCCCATCCATCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSLSRSP*SHPSLD
Trigger: GTCCAGGGATGGATGGGATCATGGTGACCTGGAAAG...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTTTGCGCCGCTCAATaGAGGAAGTCAGTCTGGACG +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSVCAAQ*RKSVWT
Trigger: CGTCCAGACTGACTTCCTTCATTGAGCGGCGCAAAC...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCCTGATGTCTTCATGTaGTGGGAAGACCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEPDVFM*WEDPRT
Trigger: GGTCCGAGGGTCTTCCCATCACATGAAGACATCAGG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGGGCAGGACCCAACCTaGTGTCTTCATGTGATGGGA +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSGQDPT*CLHVMG
Trigger: TCCCATCACATGAAGACATCAGGTTGGGTCCTGCCC...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGGCTCCACAATCTGATTaGCGGCTTGGGGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEAPQSD*RLGAGT
Trigger: TGTTCCTGCCCCAAGCCGTCAATCAGATTGTGGAGC...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGTACTGCTCCACAATCTaGTTGACGGCTTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEYCSTI*LTAWGR
Trigger: CCTGCCCCAAGCCGTCAATCAGATTGTGGAGCAGTA...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGGAAACCCAGCCTCCTTaGGTTGAAAGGACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQETQPP*VERTPH
Trigger: GTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTC...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCAAAACCAAGCGATaGGCAAAAAGCTTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGSKTKR*AKSLKC
Trigger: ACACTTTAAGCTTTTTGCTCATCGCTTGGTTTTGCT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATTTCTGTCATGATTGCTaGGGGCCGGAAACGTTAAAA +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNFCHDC*GPETLK
Trigger: TTTTAACGTTTCCGGCCCGCAGCAATCATGACAGAA...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTTCTGCAGGTCCGCATTaGCTGAGCCTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGSAGPH*LSLSSF
Trigger: AAAAGAACTCAGGCTCAGGCAATGCGGACCTGCAGA...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCCGCTCATCCAGGGCTaGCGCAAACGCCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSPLIQG*RKRLPL
Trigger: GAGTGGAAGGCGTTTGCGGCAGCCCTGGATGAGCGG...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAGTAGGATCTTTCGCTaGTCAACACGCCGAACGAAA +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNSRIFR*STRRTK
Trigger: TTTCGTTCGGCGTGTTGAGCAGCGAAAGATCCTACT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTCCAGCAGCTCCTTCTaGAGCTCCTCCAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDSSSSF*SSSSHV
Trigger: GACGTGGCTGGAGGAGCTGCAGAAGGAGCTGCTGGA...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGCGCCTCGTCCAGCTaGTGCAGCACCGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDCASSS*CSTVSM
Trigger: CATTGAGACGGTGCTGCAGCAGCTGGACGAGGCGCA...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATTGGTGCTGGAGGCGCTaGTCTGCAATCGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHWCWRR*SAIVRS
Trigger: AGATCTCACGATTGCAGAGCAGCGCCTCCAGCACCA...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACGGTCAAGGCTTTGTCTaGATGGTGCTGGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNGQGFV*MVLEAL
Trigger: CAGCGCCTCCAGCACCATGCAGACAAAGCCTTGACC...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTACCTCATTGACATACTaGAGAAGATCTTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGTSLTY*RRSCPW
Trigger: CCAAGGGCAAGATCTTCTGCAGTATGTCAATGAGGT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAACCTCATTGACATACTaGAGAAGATCTTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SLKCTLQTASGQAPWICRTSLTY*RRSCPW
Trigger: CCAAGGGCAAGATCTTCTGCAGTATGTCAATGAGGT...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACCACCTGTTTCACTTCTaGCTGCAGGTGGCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNHLFHF*LQVAQL
Trigger: CAGCTGCGCCACCTGCAGGCAGAAGTGAAACAGGTG...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATATGGCTTCTGCCTTCTaGTGCACCTGCAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDMASAF*CTCSAL
Trigger: GAGCGCGCTGCAGGTGCAGCAGAAGGCAGAAGCCAT...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCATCCTTCTGCTCCAGGTaGTTGCTGATCATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSSFCSR*LLIMGV
Trigger: GACGCCCATGATCAGCAAGCACCTGGAGCAGAAGGA...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCCTTCTGCTCCAGGTaGTTGCTGATCATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPSFCSR*LLIMGV
Trigger: GACGCCCATGATCAGCAAGCACCTGGAGCAGAAGGA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTCCTCCGAGCAAGGGTaGAAGCCTTCAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSSSEQG*KPSGMP
Trigger: AGGCATTCCTGAAGGCTTGCACCCTTGCTCGGAGGA...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTTCAGGAGCTTTGATGTaGGTCACCATTCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGSGALM*VTIPGM
Trigger: CATGCCAGGAATGGTGACGCACATCAAAGCTCCTGA...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGGTTCTTTGTTTACAATaGCAGGTGGAATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGVLCLQ*QVESLP
Trigger: TGGAAGAGATTCCACCTGGCATTGTAAACAAAGAAC...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATCCCACAGTGCAAATTTaGAAGGGTCTCCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNPTVQI*KGLLQH
Trigger: ATGTTGAAGGAGACCCTTGCAAATTTGCACTGTGGG...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTCTGGAGTGGGCGATaGACAGTGAACCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSFWSGR*TVNHRG
Trigger: TCCCCTGTGGTTCACTGTGCATCGCCCACTCCAGAA...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCGCGGCTCTTCTTGTaGTTGTGCGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPSRLFL*LCASFF
Trigger: GAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCATCTTCTCCACAGCTCTaGATCCCCGAGGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSSSPQL*IPEEED
Trigger: ATCCTCCTCCTCGGGGATGCAGAGCTGTGGAGAAGA...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAGGAGCACGTGCTCATaGGGTCAGTATCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHRSTCS*GQYPCQ
Trigger: CTGGCAAGGATACTGACCGCATGAGCACGTGCTCCT...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTAAACGGAGTGCTGTGTaGCAAGATGTTGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSKRSAV*QDVDFL
Trigger: CAAGAAGTCAACATCTTGGCACACAGCACTCCGTTT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATGGTCACTGTAGGAGATaGTGTAGTGACCATCGTTGT +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADGHCRR*CSDHRC
Trigger: ACAACGATGGTCACTACAGCATCTCCTACAGTGACC...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp AGAAGCCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCCCAGGTGTGCTATCCTaGAGTTGTGCAGGTACCGGA +
Preference number: 4 (lower is better)
Translates to: RSLLCRKFLMLRIGRTSFPGVLS*SCAGTG
Trigger: TCCGGTACCTGCACAACTGCAGGATAGCACACCTGG...GAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCACCAGTGCGAATGCTaGCACAGTGACTCGGGCATT +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEHQCEC*HSDSGI
Trigger: AATGCCCGAGTCACTGTGGCAGCATTCGCACTGGTG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATACCAGTTGTTCCAGTTTaGCCTGCCAAGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIPVVPV*PAKLSH
Trigger: GTGGCTGAGCTTGGCAGGGCAAACTGGAACAACTGG...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTTTTCTTCTCTAAAGTaGACACTTCAAACAGCATCC +
Preference number: 4 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPFSSLK*TLQTAS
Trigger: GGATGCTGTTTGAAGTGTGCACTTTAGAGAAGAAAA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTGGAGATGTTGCTACTaGTGCTGCTTTCACTCTGAC +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADWRCCY*CCFHSD
Trigger: GTCAGAGTGAAAGCAGCAGCAGTAGCAACATCTCCA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGGCATGGTGGACACCTTaGGCAAGAGGTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSAWWTP*ARGSAG
Trigger: ACCTGCAGAACCTCTTGCCCAAGGTGTCCACCATGC...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCACTCAGCTGGAAGCACTaGTCCAGCTTCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSLSWKH*SSFSFL
Trigger: GAGGAAGCTGAAGCTGGACCAGTGCTTCCAGCTGAG...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATGGTGCAGCACCTCGTaGATGACATCCAGGACATGG +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIWCSTS*MTSRTW
Trigger: CCATGTCCTGGATGTCATCCACGAGGTGCTGCACCA...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp ATGGTTGGCTTGGCTAAACTCTCATCCACCAGGATATTCTCAGGCTTTAGGTCCAGAAATGCTTCTCCGTaGTTCTCGATCCAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: MVGLAKLSSTRIFSGFRSRNASP*FSIQSS
Trigger: GCTAGACTGGATCGAGAACCACGGAGAAGCATTTCT...GGACCTAAAGCCTGAGAATATCCTGGTGGATGAGAGTTTAGCCAAGCCAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGTCCACACCAGAGGCCTaGACCTCATTGACATACTGC +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWSTPEA*TSLTYC
Trigger: GCAGTATGTCAATGAGGTCCAGGCCTCTGGTGTGGA...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACGTCCGTCTCAGAGTTTaGGCCCAGCTTATCCGCCCC +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNVRLRV*AQLIRP
Trigger: GGGGCGGATAAGCTGGGCCCAAACTCTGAGACGGAC...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCATGGGCGTCACGTaGTCCGTCTCAGAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSIMGVT*SVSEFG
Trigger: CCCAAACTCTGAGACGGACCACGTGACGCCCATGAT...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAACCCTGTTCTCCCGTTaGAAGAGTTCATTCAAGATA +
Preference number: 4 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTTLFSR*KSSFKI
Trigger: TATCTTGAATGAACTCTTCCAACGGGAGAACAGGGT...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGGTATACTGGAGCCCGTaGAGGTGTGTGTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWVYWSP*RCVWKG
Trigger: ACCTTTCCACACACACCTCCACGGGCTCCAGTATAC...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTTTTATCTCTGCCGCATaGGCATGCCCTTTTTCACAA +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGFISAA*ACPFSQ
Trigger: TTGTGAAAAAGGGCATGCCCATGCGGCAGAGATAAA...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGCGTTATTCGCTGAACTaGTTTAATAAGGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLRYSLN*FNKVGR
Trigger: TCTTCCTACCTTATTAAACCAGTTCAGCGAATAACG...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGACGTCCGTGAGGCGATaGAAATCGTATCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSETSVRR*KSYQAG
Trigger: GCCAGCCTGATACGATTTCCATCGCCTCACGGACGT...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCATGATTCTCTGCACTaGTTTGATCAACAGATCTGT +
Preference number: 4 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSHDSLH*FDQQIC
Trigger: ACAGATCTGTTGATCAAACCAGTGCAGAGAATCATG...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGAAGAGCAGTTTACCCTaGGCAACGATTTTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLKSSLP*ATIFPS
Trigger: CGACGGGAAAATCGTTGCCCAGGGTAAACTGCTCTT...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATACAGGAATCCCGGCATaGAGAAGCCCTTCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNTGIPA*RSPSFY
Trigger: ATAAAAAGAAGGGCTTCTCCATGCCGGGATTCCTGT...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCCGCTGTGGTTCCTCTaGTACTCGATTGGCGATGTC +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEPLWFL*YSIGDV
Trigger: GACATCGCCAATCGAGTACCAGAGGAACCACAGCGG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGCACGGACTGCTCGCTaGCCGAGGAGCACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRARTAR*PRSTCS
Trigger: TGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGTTCCAGGAGGCGACCCTaGTCAGCCATTTCTAAGACC +
Preference number: 4 (lower is better)
Translates to: LLCRKFLMLRIGRTSFWCSRRRP*SAISKT
Trigger: GGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGA...ACACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACATGAGAAAGAACTTCTaGATAGGTCAAACTCTAGGC +
Preference number: 4 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNMRKNF*IGQTLG
Trigger: GCCTAGAGTTTGACCTATCCAGAAGTTCTTTCTCAT...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATGACTCGCGATCTGCCTaGTCTGCTGCGAGGCATAGT +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDDSRSA*SAARHS
Trigger: ACTATGCCTCGCAGCAGATCAGGCAGATCGCGAGTC...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCACTCCTGCTCCAGCTaGCTCGCGATCTGCCTGATC +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSHSCSS*LAICLI
Trigger: GATCAGGCAGATCGCGAGTCAGCTGGAGCAGGAGTG...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGGCTGTTCAGGAGCTTTaGTGTGCGTCACCATTCCTG +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSAVQEL*CASPFL
Trigger: CAGGAATGGTGACGCACATCAAAGCTCCTGAACAGC...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATAAGACCACGTACTGCTaGCACTGGTCCAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDKTTYC*HWSSRL
Trigger: GAGACGGCTGGACCAGTGTCAGCAGTACGTGGTCTT...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACTGTGACACCCAACTCTaGGGTAAACAATTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDCDTQL*GKQFAF
Trigger: AAAAGCAAATTGTTTACCTCAGAGTTGGGTGTCACA...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGCCTCACTCAATGGAATaGCGAATTCTGGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWPHSME*RILGER
Trigger: ACGTTCCCCCAGAATTCGTCATTCCATTGAGTGAGG...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTGTCCAAGCACTGCTaGGCACAGCTCACTTGGAAT +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSVSKHC*AQLTWN
Trigger: ATTCCAAGTGAGCTGTGCTCAGCAGTGCTTGGACAC...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGTTCTGTCATGATTGCTaGGGGCCGGAAACGTTAAAA +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGFCHDC*GPETLK
Trigger: TTTTAACGTTTCCGGCCCGCAGCAATCATGACAGAA...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTACCATGAATCCACGTTaGTCATATACTTTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGTMNPR*SYTFRP
Trigger: AGGCCGAAAAGTATATGAGCAACGTGGATTCATGGT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCGCATCTTCTAGGTCCTaGAGCTCTGAGGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSASSRS*SSEGRS
Trigger: AGACCTTCCCTCAGAGCTGCAGGACCTAGAAGATGC...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCTGCCCCACACCTGTATGTTTaGTCAGAAATGCTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: SLGSFLITFLNDRESAPAPHLYV*SEMLLR
Trigger: ACGGAGAAGCATTTCTGAGCAAACATACAGGTGTGG...GGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAGGGTGGTCTGCTGCTaGTGGCCAAAGCGCTTGATG +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNRVVCC*WPKRLM
Trigger: CATCAAGCGCTTTGGCCAGCAGCAGCAGACCACCCT...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTAAGAGCTCCTCCATCTaGGACTGCGCCTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSKSSSI*DCASSS
Trigger: GCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTCTT...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCTGGAGGCGCTGCTCTaGAATCGTGAGATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSELEALL*NREIFC
Trigger: ACAGAAGATCTCACGATTGCAGAGCAGCGCCTCCAG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACGCTTTGTCTGCATGGTaGTGGAGGCGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNALSAW*WRRCSA
Trigger: TGCAGAGCAGCGCCTCCAGCACCATGCAGACAAAGC...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAATACTGCAGAAGATCTTaGCCTTGGTGGATGACGTCA +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKYCRRS*PWWMTS
Trigger: TGACGTCATCCACCAAGGGCAAGATCTTCTGCAGTA...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTCCAGGTGTTTCCGATaGTGCTCTGCGGCTAAATCC +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQSRCFR*CSAAKS
Trigger: GGATTTAGCCGCAGAGCAGCATCGGAAACACCTGGA...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATCCAGGTGTTTCCGATaGTGCTCTGCGGCTAAATCC +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSISRCFR*CSAAKS
Trigger: GGATTTAGCCGCAGAGCAGCATCGGAAACACCTGGA...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACGGCTCTCGAGGACGCTaGAGACCTGCTCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNGSRGR*RPALRF
Trigger: AAACCTCAGAGCAGGTCTGCAGCGTCCTCGAGAGCC...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAGGAATGCCTCCTTCTaGTCCAGGTGCTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHRNASF*SRCLLI
Trigger: GATCAGCAAGCACCTGGAGCAGAAGGAGGCATTCCT...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGTCCTCCGAGCAAGGGTaGAAGCCTTCAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWESSEQG*KPSGMP
Trigger: AGGCATTCCTGAAGGCTTGCACCCTTGCTCGGAGGA...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCTTCACGCTGTTCCTGTaGAGGTATTTCAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: HCSLGSFLITFLNDRESAFTLFL*RYFRKT
Trigger: CGTCTTCCTGAAATACCTGCACAGGAACAGCGTGAA...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGATCTGGAACTCCTCGTaGTCTTTCAGGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEIWNSS*SFRSSW
Trigger: CCAGGAGCTCCTGAAAGAGCACGAGGAGTTCCAGAT...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCTGGAACTCCTCGTaGTCTTTCAGGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSIWNSS*SFRSSW
Trigger: CCAGGAGCTCCTGAAAGAGCACGAGGAGTTCCAGAT...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTCAAAAAGGAAGAGATaGCGTTCTCGACCCTTTCGA +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADSKRKR*RSRPFR
Trigger: TCGAAAGGGTCGAGAACGGCATCTCTTCCTTTTTGA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAGCGAGGCAGAAGTCCTaGATCTTGGTCTGTGACCAA +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPARQKS*ILVCDQ
Trigger: TTGGTCACAGACCAAGATGCAGGACTTCTGCCTCGC...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTCATGGATCCAAGTTTaGCGGACACTTGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADSWIQV*RTLGLD
Trigger: ATCTAGTCCAAGTGTCCGGCAAACTTGGATCCATGA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAGGTCACTGTAGGAGATaGTGTAGTGACCATCGTTGT +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKGHCRR*CSDHRC
Trigger: ACAACGATGGTCACTACAGCATCTCCTACAGTGACC...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCGATGCACGTGTAGATaGCGTCATCTTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHRCTCR*RHLPWS
Trigger: TGACCACGGAAGATGACGGCATCTACACGTGCATCG...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGACTGTGATACAGCAATaGGACCTCTGCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQTVIQQ*DLCLGQ
Trigger: CTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGT...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAATGCTGCTGCTTTCACTaGATGCCTTCAGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKCCCFH*MPSGKC
Trigger: ACACTTTCCTGAAGGCATGCAGTGAAAGCAGCAGCA...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCTGTTCCAGTTTGCCCTaGCAAGCTCAGCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSCSSLP*QAQPLH
Trigger: GTGAAGTGGCTGAGCTTGGCAGGGCAAACTGGAACA...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTCAATCCATTCTTCGTaGTTGTATTCCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADSIHSS*LYSRQP
Trigger: TGGCTGCCTGGAATACAACCACGAAGAATGGATTGA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTAGCCTGAGTTCTTTTTaGGAAAGCTTTCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSSLSSF*ESFHCS
Trigger: AGAGCAGTGAAAGCTTTCCCAAAAAGAACTCAGGCT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTGCCGGTCCAGCATGGTaGACACCTTGGGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSAGPAW*TPWARG
Trigger: ACCTCTTGCCCAAGGTGTCCACCATGCTGGACCGGC...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTAGCAGCCGGTCCAGCATaGTGGACACCTTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLAAGPA*WTPWAR
Trigger: TCTTGCCCAAGGTGTCCACCATGCTGGACCGGCTGC...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGCTCAGCTGGAAGCACTaGTCCAGCTTCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWELSWKH*SSFSFL
Trigger: GAGGAAGCTGAAGCTGGACCAGTGCTTCCAGCTGAG...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGCCTGGTGGTGATGAATaGCATCTTCTAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWPGGDE*HLLGPA
Trigger: TGCAGGACCTAGAAGATGCCATTCATCACCACCAGG...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTGGAGTCAAGGGCCGCTaGAGCTTGTCAAGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSGVKGR*SLSRSD
Trigger: GTCGCTCCTTGACAAGCTCCAGCGGCCCTTGACTCC...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATGTGGTCTGCTGCTGCTaGCCAAAGCGCTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDVVCCC*PKRLMR
Trigger: CCTCATCAAGCGCTTTGGCCAGCAGCAGCAGACCAC...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGAGATCTTGCCCTTGGTaGATGACGTCAAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVRSCPW*MTSKVK
Trigger: CTTGACTTTTGACGTCATCCACCAAGGGCAAGATCT...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAGAAGATCTTGCCCTTaGTGGATGACGTCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGRRSCP*WMTSKV
Trigger: GACTTTTGACGTCATCCACCAAGGGCAAGATCTTCT...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGATCATGGGCGTCACGTaGTCCGTCTCAGAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWEIMGVT*SVSEFG
Trigger: CCCAAACTCTGAGACGGACCACGTGACGCCCATGAT...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATGTGCGTCACCATTCCTaGCATGTTCACGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHVRHHS*HVHAVP
Trigger: AGGAACAGCGTGAACATGCCAGGAATGGTGACGCAC...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACCGTGGAGGTGTGTGTaGAAAGGTAGAACTCGCCAT +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPPWRCV*KGRTRH
Trigger: ATGGCGAGTTCTACCTTTCCACACACACCTCCACGG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACGGGTGTGCTGTATACTaGAGCCCGTGGAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNGCAVY*SPWRCV
Trigger: CACACACCTCCACGGGCTCCAGTATACAGCACACCC...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGTTTACAATGCCAGGTaGAATCTCTTCCACGCCACT +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGVYNAR*NLFHAT
Trigger: AGTGGCGTGGAAGAGATTCCACCTGGCATTGTAAAC...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTAGGAAGAAATGGAATTaGCTAATCCATGTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSRKKWN*LIHVAA
Trigger: AGCAGCGACATGGATTAGCCAATTCCATTTCTTCCT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTTTTGGGTCCCACACTTaGAAGGATTCCTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGFGSHT*KDSCRM
Trigger: CATCCTACAGGAATCCTTCCAAGTGTGGGACCCAAA...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGACGGATGCGGGTGGACTaGCGTCATTGCTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRRMRVD*RHCWRR
Trigger: CCGTCTCCAGCAATGACGCCAGTCCACCCGCATCCG...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGTTCTCTTTAAAGAGCTaGATTTCCTTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLFSLKS*ISFLPS
Trigger: AGATGGAAGAAAGGAAATCCAGCTCTTTAAAGAGAA...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATACAGGAATCCCGGCATaGAGAAGCCCTTCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNTGIPA*RSPSFY
Trigger: ATAAAAAGAAGGGCTTCTCCATGCCGGGATTCCTGT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACATTTGGTTGATTTCATaGATCCAAGTTTGCCGGACA +
Preference number: 4 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDIWLIS*IQVCRT
Trigger: TGTCCGGCAAACTTGGATCCATGAAATCAACCAAAT...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGGGAGGGCCCGGGGGTaGACGTACCTGACATCTTGT +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRGRARG*TYLTSC
Trigger: ACAAGATGTCAGGTACGTCCACCCCCGGGCCCTCCC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCTGCCGTCATCTTCCGTaGTCACGCCCACAATCTTCA +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSCRHLP*SRPQSS
Trigger: TGAAGATTGTGGGCGTGACCACGGAAGATGACGGCA...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGAGACCAGGATGTAGCTaGTGGGGGTCTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSERPGCS*WGSQRC
Trigger: ACACCTTTGAGACCCCCACCAGCTACATCCTGGTCT...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACAGATTAACAGCTGATTaGCAGGTGAAAGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDRLTAD*QVKENE
Trigger: CTCATTCTCTTTCACCTGCCAATCAGCTGTTAATCT...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATTCCATCCACCTTCGTTaGAAGAGTTTCCATAAGGAC +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNSIHLR*KSFHKD
Trigger: GTCCTTATGGAAACTCTTCCAACGAAGGTGGATGGA...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGCTGCTCTGCAATCGTaGGATCTTCTGTGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSAALQS*DLLCRS
Trigger: ACTTCGACACAGAAGATCTCACGATTGCAGAGCAGC...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAGGATACTGGCTGGAATaGTATCTAGCTGGAGACTTT +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKGYWLE*YLAGDF
Trigger: AAAGTCTCCAGCTAGATATCATTCCAGCCAGTATCC...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACTCGAAGTTTCACCTCTaGGCCAGGGATACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNSKFHL*ARDTGW
Trigger: CCAGCCAGTATCCCTGGCTCAGAGGTGAAACTTCGA...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTTGTGACACCCAACTCTaGGGTAAACAATTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGCDTQL*GKQFAF
Trigger: AAAAGCAAATTGTTTACCTCAGAGTTGGGTGTCACA...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTGTGACACCCAACTCTaGGGTAAACAATTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICCDTQL*GKQFAF
Trigger: AAAAGCAAATTGTTTACCTCAGAGTTGGGTGTCACA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATTCCTTCAGTAACAGCTaGTACTTCATGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNSFSNS*YFMILC
Trigger: GCAGAGAATCATGAAGTATCAGCTGTTACTGAAGGA...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCACTCCTTGGTAGACGTTaGTCTCATCCTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSLLGRR*SHPPSL
Trigger: CAGTGAAGGAGGATGAGATCAACGTCTACCAAGGAG...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTAAATGTAGTTGGGATTaGGAAGCTTCACAGATACCT +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGKCSWD*EASQIP
Trigger: AGGTATCTGTGAAGCTTCTCAATCCCAACTACATTT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR TCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGCCTCACTCAATGGAATaGCGAATTCTGGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQPHSME*RILGER
Trigger: ACGTTCCCCCAGAATTCGTCATTCCATTGAGTGAGG...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGCTGAACCCATGTCATTaGCAGCGATGCACGTGTAGA +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQLNPCH*QRCTCR
Trigger: TCTACACGTGCATCGCTGTCAATGACATGGGTTCAG...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR TCA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGCAAAGTCAGCCAGTTTaGTGGTTGGCTTGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: PALQKVFNATDRSNIILVQSQPV*WLAWLN
Trigger: GTTTAGCCAAGCCAACCATCAAACTGGCTGACTTTG...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGTACAGGTTAGTAGGGTaGCCAGTTGTTCCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWYRLVG*PVVPVC
Trigger: GCAAACTGGAACAACTGGTCACCCTACTAACCTGTA...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTACAGGGGAAGGACTCCTaGAGGATCTTCAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLQGKDS*RIFRRG
Trigger: GCCCCTTCTGAAGATCCTGCAGGAGTCCTTCCCCTG...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTCCACACCTGTATGTTTaGTCAGAAATGCTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGPHLYV*SEMLLR
Trigger: ACGGAGAAGCATTTCTGAGCAAACATACAGGTGTGG...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCGGTGTATGTGTTCTGTaGCACTTCTTCAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: SSLKCTLQTASGQAPWICGVCVL*HFFKIF
Trigger: GAAGATTTTGAAGAAGTGGCACAGAACACATACACC...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGCAGAGTCCCTGAGCTaGTGGATGAGGTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRAESLS*WMRSSP
Trigger: AGGGGAGGACCTCATCCAGCAGCTCAGGGACTCTGC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGTGCTGGAGGCGCTaGTCTGCAATCGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDWCWRR*SAIVRS
Trigger: AGATCTCACGATTGCAGAGCAGCGCCTCCAGCACCA...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGACCTCATTGACATACTaGAGAAGATCTTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLTSLTY*RRSCPW
Trigger: CCAAGGGCAAGATCTTCTGCAGTATGTCAATGAGGT...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCGTCCTGGACCCGAGTTaGCATGTCTACATCTCTATC +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSVLDPS*HVYISI
Trigger: GATAGAGATGTAGACATGGCAACTCGGGTCCAGGAC...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATTCAGGAGCTTTGATGTaGGTCACCATTCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHSGALM*VTIPGM
Trigger: CATGCCAGGAATGGTGACGCACATCAAAGCTCCTGA...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAAGGAGCTCCTGGGTGTaGTGTATACTGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTRSSWV*CILEPV
Trigger: CACGGGCTCCAGTATACAGCACACCCAGGAGCTCCT...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCTCTGCCGCATGGGCATaGCCTTTTTCACAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSSAAWA*PFSQKP
Trigger: TGGCTTTTGTGAAAAAGGGCATGCCCATGCGGCAGA...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGGTCAAAATAGGACCCTaGATGTTCCAATATCAGCTG +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGVKIGP*MFQYQL
Trigger: CAGCTGATATTGGAACATGCAGGGTCCTATTTTGAC...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTTCAAAAAGGAAGAGATaGCGTTCTCGACCCTTTCGA +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGSKRKR*RSRPFR
Trigger: TCGAAAGGGTCGAGAACGGCATCTCTTCCTTTTTGA...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATGTTGCTACTGCTGCTaGTTTCACTCCCGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPCCYCC*FHSRCS
Trigger: AGAGCAACGGGAGTGAAAGCAGCAGCAGTAGCAACA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATGGAGATGTTGCTACTaGTGCTGCTTTCACTCCCGT +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPWRCCY*CCFHSR
Trigger: ACGGGAGTGAAAGCAGCAGCAGTAGCAACATCTCCA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACTCATCCTCCTTCACTaGCGTGTAATCGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPLILLH*RVIVCH
Trigger: GTGACACACGATTACACGGCAGTGAAGGAGGATGAG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAAAACGGAGTGCTGTGTaGCAAGATGTTGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKKRSAV*QDVDFL
Trigger: CAAGAAGTCAACATCTTGGCACACAGCACTCCGTTT...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGGGTCACTGTAGGAGATaGTGTAGTGACCATCGTTGT +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWGHCRR*CSDHRC
Trigger: ACAACGATGGTCACTACAGCATCTCCTACAGTGACC...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTGAAACCAAAAGACGCTaGGTTGAGAAGGTTAATGAT +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGETKRR*VEKVND
Trigger: ATCATTAACCTTCTCAACGCAGCGTCTTTTGGTTTC...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGACCTGGGAGCCATTCTaGACAAATGCCAGTTATTCC +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWTWEPF*TNASYS
Trigger: GGAATAACTGGCATTTGTGCAGAATGGCTCCCAGGT...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGTCAATCCATTCTTCGTaGTTGTATTCCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLSIHSS*LYSRQP
Trigger: TGGCTGCCTGGAATACAACCACGAAGAATGGATTGA...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAGCCTGAGTTCTTTTTaGGAAAGCTTTCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGSLSSF*ESFHCS
Trigger: AGAGCAGTGAAAGCTTTCCCAAAAAGAACTCAGGCT...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAGCCTGAGTTCTTTTTaGGAAAGCTTTCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNSLSSF*ESFHCS
Trigger: AGAGCAGTGAAAGCTTTCCCAAAAAGAACTCAGGCT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGCAGCCGGTCCAGCATaGTGGACACCTTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRAAGPA*WTPWAR
Trigger: TCTTGCCCAAGGTGTCCACCATGCTGGACCGGCTGC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACTGGCATGAGGGTGGCTaGTCCCAATCTCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNWHEGG*SQSLCS
Trigger: GCTACACAGAGATTGGGACCAGCCACCCTCATGCCA...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACCTTCTGGTGGAAAATaGAGGACATGTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPPSGGK*RTCPAR
Trigger: CCTTGCTGGACATGTCCTCCATTTTCCACCAGAAGG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGGTTTCTGCAATGCTCTaGCCCGATGAAGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWVSAML*PDEEIS
Trigger: GGAAATCTCTTCATCGGGCCAGAGCATTGCAGAAAC...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAACTCCAGCAGGTCCTaGACCCGAGTTGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNNSSRS*TRVAMS
Trigger: AGACATGGCAACTCGGGTCCAGGACCTGCTGGAGTT...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGTCCGTCTCAGAGTTTaGGCCCAGCTTATCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRVRLRV*AQLIRP
Trigger: GGGGCGGATAAGCTGGGCCCAAACTCTGAGACGGAC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGCCGTCTCTTCCTCATaGTCCAGTAATGCAATACCC +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSAVSSS*SSNAIP
Trigger: GGGTATTGCATTACTGGACCATGAGGAAGAGACGGC...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAGCCGTCTCTTCCTCATaGTCCAGTAATGCAATACCC +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIAVSSS*SSNAIP
Trigger: GGGTATTGCATTACTGGACCATGAGGAAGAGACGGC...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACACGTTATTCGCTGAACTaGTTTAATAAGGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTRYSLN*FNKVGR
Trigger: TCTTCCTACCTTATTAAACCAGTTCAGCGAATAACG...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGATCTGGCCCCGTCGGATaGTCAGCTCGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRSGPVG*SARCCC
Trigger: GCAACAGCAACGAGCTGACCATCCGACGGGGCCAGA...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGATGCTACTTCTGGAGTaGGCGATGCACAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEMLLLE*AMHSEP
Trigger: TGGTTCACTGTGCATCGCCCACTCCAGAAGTAGCAT...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATGCTACTTCTGGAGTaGGCGATGCACAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHMLLLE*AMHSEP
Trigger: TGGTTCACTGTGCATCGCCCACTCCAGAAGTAGCAT...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGTTTCCATGCTACTTCTaGAGTGGGCGATGCACAGTG +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEFPCYF*SGRCTV
Trigger: CACTGTGCATCGCCCACTCCAGAAGTAGCATGGAAA...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATTTCCATGCTACTTCTaGAGTGGGCGATGCACAGTG +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIFPCYF*SGRCTV
Trigger: CACTGTGCATCGCCCACTCCAGAAGTAGCATGGAAA...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCCTGCTACTATCTCCCTaGTCAACAAGGAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSLLLSP*STRSEL
Trigger: CAGCTCACTCCTTGTTGACCAGGGAGATAGTAGCAG...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCAGAAGTCCTGCATCTTaGTCTGTGACCAAGAATGTG +
Preference number: 4 (lower is better)
Translates to: HCSLGSFLITFLNDRESARSPAS*SVTKNV
Trigger: CACATTCTTGGTCACAGACCAAGATGCAGGACTTCT...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTATTTGGTTGATTTCATaGATCCAAGTTTGCCGGACA +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSIWLIS*IQVCRT
Trigger: TGTCCGGCAAACTTGGATCCATGAAATCAACCAAAT...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGATCACTCCCGTTGCTCTaGGTGGACTGCACGGACTGC +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRSLPLL*VDCTDC
Trigger: GCAGTCCGTGCAGTCCACCCAGAGCAACGGGAGTGA...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGTCGTGACCTCACTCAATaGAATGACGAATTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLCRKFLMLRIGRTSFWCRDLTQ*NDEFWG
Trigger: CCCCCAGAATTCGTCATTCCATTGAGTGAGGTCACG...ACACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAAGATATTCTGCTGGTTaGAAATGGAAGAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKRYSAG*KWKKPK
Trigger: TTTTGGTTTCTTCCATTTCCAACCAGCAGAATATCT...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR TCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTTCTTCAGAAGGGGCTTaGTGGAGTCCCACTTGGACC +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSSSEGA*WSPTWT
Trigger: GGTCCAAGTGGGACTCCATCAAGCCCCTTCTGAAGA...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAACCTTCTTCTTCAGCTaGGAATGTTCCTCGATCATA +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKTFFFS*ECSSII
Trigger: TATGATCGAGGAACATTCTCAGCTGAAGAAGAAGGT...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGACTTCCCATCTTGGCTaGCCTCAGAATAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQTSHLG*PQNKQE
Trigger: CTCTTGCTTATTCTGAGGTCAGCCAAGATGGGAAGT...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATGCAGCACCTCGTGGATaGCATCCAGGACATGGTGCA +
Preference number: 4 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHAAPRG*HPGHGA
Trigger: TGCACCATGTCCTGGATGTCATCCACGAGGTGCTGC...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCTTTCACATGGGTGTaGAAGGACACTGACATGTCC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPSFTWV*KDTDMS
Trigger: GGACATGTCAGTGTCCTTTCACACCCATGTGAAAGA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTAGGAAGAGCTCCAGCTTaGTCTTGCGCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLGRAPA*SCAPGR
Trigger: TCTTCCAGGAGCGCAAGATCAAGCTGGAGCTCTTCC...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACTTGCCCTTGGTGGATaGCGTCAAAAGTCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPLALGG*RQKSSC
Trigger: ACAACTTGACTTTTGACGTCATCCACCAAGGGCAAG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGGCCTGGACCTCATTaGCATACTGCAGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQRPGPH*HTAEDL
Trigger: AAGATCTTCTGCAGTATGTCAATGAGGTCCAGGCCT...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACACCTGCAGCGCGCTCTaGTGTGTTTTCTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNTCSAL*CVFSMA
Trigger: TGCCATTGAGAAAACACATCAGAGCGCGCTGCAGGT...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATGCTGCAGACCTGCTCTaGGGTTTTGTAGAAAGCGAC +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDAADLL*GFVESD
Trigger: GTCGCTTTCTACAAAACCTCAGAGCAGGTCTGCAGC...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACGCTTGGTTCCTTTCTaGTCACATTTCTTAACGACA +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKRLVPF*SHFLTT
Trigger: TGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp TCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCTGCCGGTGTATGTGTTCTGTaGCACTTCTTCAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: SLGSFLITFLNDRESAPAGVCVL*HFFKIF
Trigger: GAAGATTTTGAAGAAGTGGCACAGAACACATACACC...GGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCTACTGCAGAAGATCTTaGCCTTGGTGGATGACGTCA +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSYCRRS*PWWMTS
Trigger: TGACGTCATCCACCAAGGGCAAGATCTTCTGCAGTA...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTGTTTCACTTCTGCCTaGAGGTGGCGCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHCFTSA*RWRSCT
Trigger: CGTGCAGCTGCGCCACCTGCAGGCAGAAGTGAAACA...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACATGCTCTCGCTGGAGCTaGTCTGCCTCTTGTAACGAG +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTCSRWS*SASCNE
Trigger: CTCGTTACAAGAGGCAGAGCAGCTCCAGCGAGAGCA...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATATGGCATGCTGGAACTaGTCGTGCTCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHMACWN*SCSRWS
Trigger: GCTCCAGCGAGAGCACGAGCAGTTCCAGCATGCCAT...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTTCACGCTGTTCCTGTaGAGGTATTTCAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQFTLFL*RYFRKT
Trigger: CGTCTTCCTGAAATACCTGCACAGGAACAGCGTGAA...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATCCATTCCAAAGCCTaGTTGGCACTCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHIHSKA*LALLSK
Trigger: CTTTGAGAGGAGTGCCAAGCAGGCTTTGGAATGGAT...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTCTCTTTGGTTTGCTTTaGAGTTATCTGGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGLFGLL*SYLELL
Trigger: GAGGAGTTCCAGATAACTGCAAAGCAAACCAAAGAG...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCGTCAAAATAGGACCCTaGATGTTCCAATATCAGCTG +
Preference number: 4 (lower is better)
Translates to: HCSLGSFLITFLNDRESAVKIGP*MFQYQL
Trigger: CAGCTGATATTGGAACATGCAGGGTCCTATTTTGAC...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATACCTCCAGTGCCATCTTaGTTTTCACGAGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIPPVPS*FSRVPQ
Trigger: TTGAGGAACTCGTGAAAAGCAAGATGGCACTGGAGG...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGTCATGGATCCAAGTTTaGCGGACACTTGGACTAGAT +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWSWIQV*RTLGLD
Trigger: ATCTAGTCCAAGTGTCCGGCAAACTTGGATCCATGA...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGATGGCCGAGGAGCACGTaGTCATGCGGTCAGTATCCT +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRWPRST*SCGQYP
Trigger: AGGATACTGACCGCATGAGCACGTGCTCCTCGGCCA...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGAAACGGAGTGCTGTGTaGCAAGATGTTGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: PALQKVFNATDRSNIILVKRSAV*QDVDFL
Trigger: CAAGAAGTCAACATCTTGGCACACAGCACTCCGTTT...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGTGTTGCTACTGCTGCTaGTTTCACTGCATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSECCYCC*FHCMPS
Trigger: TGAAGGCATGCAGTGAAAGCAGCAGCAGTAGCAACA...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAACAGTCACTATCTaGCAAAGGTTAACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGKTVTI*QRLTVG
Trigger: GCCAACTGTTAACCTTTGGCAGATAGTGACTGTTTT...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGCATGGTGGACACCTTaGGCAAGAGGTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTAWWTP*ARGSAG
Trigger: ACCTGCAGAACCTCTTGCCCAAGGTGTCCACCATGC...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTTTCGGCCTTCTGGTaGAAAATGGAGGACATGTCC +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSFSAFW*KMEDMS
Trigger: GGACATGTCCTCCATTTTCCACCAGAAGGCCGAAAA...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGTACTTTTCGGCCTTCTaGTGGAAAATGGAGGACATG +
Preference number: 4 (lower is better)
Translates to: PALQKVFNATDRSNIILVYFSAF*WKMEDM
Trigger: CATGTCCTCCATTTTCCACCAGAAGGCCGAAAAGTA...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAAGAAATGCTTCTCCGTaGTTCTCGATCCAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPRNASP*FSIQSS
Trigger: GCTAGACTGGATCGAGAACCACGGAGAAGCATTTCT...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGTGGTCTGCTGCTGCTaGCCAAAGCGCTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRVVCCC*PKRLMR
Trigger: CCTCATCAAGCGCTTTGGCCAGCAGCAGCAGACCAC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTATTGTCTGCATGGTGCTaGAGGCGCTGCTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLLSAWC*RRCSAI
Trigger: GATTGCAGAGCAGCGCCTCCAGCACCATGCAGACAA...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAAAGGCTTTGTCTGCATaGTGCTGGAGGCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTKALSA*CWRRCS
Trigger: AGAGCAGCGCCTCCAGCACCATGCAGACAAAGCCTT...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAAGTCAAGTTGTTCATaGTCAAGGCTTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNKSSCS*SRLCLH
Trigger: ATGCAGACAAAGCCTTGACCATGAACAACTTGACTT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATGTGCGTCACCATTCCTaGCATGTTCACGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDVRHHS*HVHAVP
Trigger: AGGAACAGCGTGAACATGCCAGGAATGGTGACGCAC...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGATTCCAAAGCCTGCTTaGCACTCCTCTCAAAGACCA +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQIPKPA*HSSQRP
Trigger: TGGTCTTTGAGAGGAGTGCCAAGCAGGCTTTGGAAT...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAAACTCGCCATTGTCATaGATCCATTCCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPNSPLS*IHSKAC
Trigger: GCAGGCTTTGGAATGGATCCATGACAATGGCGAGTT...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACCCGTGGAGGTGTGTGTaGAAAGGTAGAACTCGCCAT +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNPWRCV*KGRTRH
Trigger: ATGGCGAGTTCTACCTTTCCACACACACCTCCACGG...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGGTTTACAATGCCAGGTaGAATCTCTTCCACGCCACT +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEVYNAR*NLFHAT
Trigger: AGTGGCGTGGAAGAGATTCCACCTGGCATTGTAAAC...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACTTCCATCTCATCAATaGGCGAGGAGGAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPLPSHQ*ARRKRE
Trigger: TTCTCTCTTCCTCCTCGCCCATTGATGAGATGGAAG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTTTTATCTCTCCCACCTaGAAGGTATGCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGFISPT*KVCNFF
Trigger: GAAAAAGTTGCATACCTTTCAGGTGGGAGAGATAAA...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGGGCCTTTGTTGTGTGTaGTCCAGTCAAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSGLCCV*SSQTSS
Trigger: AGAAGATGTTTGACTGGATCACACACAACAAAGGCC...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGGATTGGCCACCGACATaGTGCGGTTTATATTTACAT +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWDWPPT*CGLYLH
Trigger: ATGTAAATATAAACCGCATCATGTCGGTGGCCAATC...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACACTTCCCATCTTGGCTaGCCTCAGAATAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNTSHLG*PQNKQE
Trigger: CTCTTGCTTATTCTGAGGTCAGCCAAGATGGGAAGT...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCAGTCTAGCACCTGCTaGACGTCCTGCTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSQSSTC*TSCWKT
Trigger: TGTTTTCCAGCAGGACGTTCAGCAGGTGCTAGACTG...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAATCTTCAAAATCTTCATaGCGTTTCTGCAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKSSKSS*RFCNAL
Trigger: CAGAGCATTGCAGAAACGTCATGAAGATTTTGAAGA...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACACCAAGACTCGAGGTCTaGGATAATGTCGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTPRLEV*DNVDGV
Trigger: GACGCCATCGACATTATCTCAGACCTCGAGTCTTGG...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAAGTCATTCATTTGCTaGGAAAGCTCATCATTCCAA +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNKSFIC*ESSSFQ
Trigger: TTGGAATGATGAGCTTTCTCAGCAAATGAATGACTT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACCTTGCCCTTGGTGGATaGCGTCAAAAGTCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNLALGG*RQKSSC
Trigger: ACAACTTGACTTTTGACGTCATCCACCAAGGGCAAG...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTGCTGTTCAGGAGCTTTaGTGTGCGTCACCATTCCTG +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSAVQEL*CASPFL
Trigger: CAGGAATGGTGACGCACATCAAAGCTCCTGAACAGC...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AGAAGCCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCGGATACTGGCTGGAATaGTATCTAGCTGGAGACTTT +
Preference number: 4 (lower is better)
Translates to: RSLLCRKFLMLRIGRTSFGYWLE*YLAGDF
Trigger: AAAGTCTCCAGCTAGATATCATTCCAGCCAGTATCC...GAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGGCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGAGGATTCCTGTAGGATaGGTTCTCCCTGAGACTCAA +
Preference number: 4 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWERIPVG*VLPETQ
Trigger: TTGAGTCTCAGGGAGAACTCATCCTACAGGAATCCT...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGGACACTTGGACTAGATaGATGCAAAATGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWDTWTR*MQNEGL
Trigger: GAGACCTTCATTTTGCATTCATCTAGTCCAAGTGTC...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGCTGAGTCCTTCCCGTaGCTTCCGATAACCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRAESFP*LPITVL
Trigger: GAGAACGGTTATCGGAAGTCACGGGAAGGACTCAGC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGAAATGTAGTTGGGATTaGGAAGCTTCACAGATACCT +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLKCSWD*EASQIP
Trigger: AGGTATCTGTGAAGCTTCTCAATCCCAACTACATTT...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGCGCTTGGTTCCTTTCTaGTCACATTTCTTAACGACA +
Preference number: 4 (lower is better)
Translates to: PALQKVFNATDRSNIILVRLVPF*SHFLTT
Trigger: TGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCG...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGGAACATACCGGCAGCTaGTCAGTTATGTTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQEHTGS*SVMFAC
Trigger: ACAAGCAAACATAACTGATCAGCTGCCGGTATGTTC...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR GCA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGAGTAGGATCTTTCGCTaGTCAACACGCCGAACGAAA +
Preference number: 4 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWESRIFR*STRRTK
Trigger: TTTCGTTCGGCGTGTTGAGCAGCGAAAGATCCTACT...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACGTCCTGGACCCGAGTTaGCATGTCTACATCTCTATC +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNVLDPS*HVYISI
Trigger: GATAGAGATGTAGACATGGCAACTCGGGTCCAGGAC...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACAGGTGTTTCCGATGCTaGTCTGCGGCTAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNRCFRC*SAAKSN
Trigger: ATTGGATTTAGCCGCAGAGCAGCATCGGAAACACCT...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACATCCAGGTGTTTCCGATaGTGCTCTGCGGCTAAATCC +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTSRCFR*CSAAKS
Trigger: GGATTTAGCCGCAGAGCAGCATCGGAAACACCTGGA...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACTTTCAGGAAGACGTCTaGATTCCTCCGAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNFQEDV*IPPSKG
Trigger: ACCCTTGCTCGGAGGAATGCAGACGTCTTCCTGAAA...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTAAGATATTTTTCACTTaGTGTTCAGGAGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGKIFFT*CSGALM
Trigger: CATCAAAGCTCCTGAACAGCAAGTGAAAAATATCTT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR GCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACTCTGCCGCATGGGCATaGCCTTTTTCACAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNSAAWA*PFSQKP
Trigger: TGGCTTTTGTGAAAAAGGGCATGCCCATGCGGCAGA...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCAAAAAGGAAGAGATaGCGTTCTCGACCCTTTCGA +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPSKRKR*RSRPFR
Trigger: TCGAAAGGGTCGAGAACGGCATCTCTTCCTTTTTGA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTTTTTATAAAGGTACTTaGTTCTCCCACTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSFYKGT*FSHWNL
Trigger: AAGATTCCAGTGGGAGAAGCAAGTACCTTTATAAAA...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp TCCTTGGTAGACGTTGATCTCATCCTCCTTCACTGCCGTGTAATCGTGTGTCACTTTTATAAAGGTACTTaGTTCTCCCACTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: SLVDVDLILLHCRVIVCHFYKGT*FSHWNL
Trigger: AAGATTCCAGTGGGAGAAGCAAGTACCTTTATAAAA...GTGACACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCCCACAGTGCAAATTTaGAAGGGTCTCCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEPTVQI*KGLLQH
Trigger: ATGTTGAAGGAGACCCTTGCAAATTTGCACTGTGGG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCCCACAGTGCAAATTTaGAAGGGTCTCCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHPTVQI*KGLLQH
Trigger: ATGTTGAAGGAGACCCTTGCAAATTTGCACTGTGGG...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATGACTTCGCGGATATaGTTTATCCAGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSMTSRI*FIQSCL
Trigger: CAAGCAGGACTGGATAAAGCATATCCGCGAAGTCAT...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGCTTGGACTAGATGAATaGAAAATGAAGGTCTCTACC +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLLGLDE*KMKVST
Trigger: GGTAGAGACCTTCATTTTGCATTCATCTAGTCCAAG...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGACATGTTCTGCTGGTTaGTGGCCAGAATTTGAACGA +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSTCSAG*WPEFER
Trigger: TCGTTCAAATTCTGGCCAGCAACCAGCAGAACATGT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAAACGGAGTGCTGTGTaGCAAGATGTTGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSKRSAV*QDVDFL
Trigger: CAAGAAGTCAACATCTTGGCACACAGCACTCCGTTT...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGACTCAGCTGGAAGCACTaGTCCAGCTTCAGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRLSWKH*SSFSFL
Trigger: GAGGAAGCTGAAGCTGGACCAGTGCTTCCAGCTGAG...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGATGGCATGAGGGTGGCTaGTCCCAATCTCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRWHEGG*SQSLCS
Trigger: GCTACACAGAGATTGGGACCAGCCACCCTCATGCCA...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTTTTCGGCCTTCTGGTaGAAAATGGAGGACATGTCC +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNFSAFW*KMEDMS
Trigger: GGACATGTCCTCCATTTTCCACCAGAAGGCCGAAAA...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACCCTGGTGGTGATGAATaGCATCTTCTAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNPGGDE*HLLGPA
Trigger: TGCAGGACCTAGAAGATGCCATTCATCACCACCAGG...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAAAGGCTTTGTCTGCATaGTGCTGGAGGCGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRKALSA*CWRRCS
Trigger: AGAGCAGCGCCTCCAGCACCATGCAGACAAAGCCTT...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAAAGTCAAGTTGTTCATaGTCAAGGCTTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKKSSCS*SRLCLH
Trigger: ATGCAGACAAAGCCTTGACCATGAACAACTTGACTT...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAAGAAGATCTTGCCCTTaGTGGATGACGTCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIRRSCP*WMTSKV
Trigger: GACTTTTGACGTCATCCACCAAGGGCAAGATCTTCT...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACATCCACACCAGAGGCCTaGACCTCATTGACATACTGC +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTSTPEA*TSLTYC
Trigger: GCAGTATGTCAATGAGGTCCAGGCCTCTGGTGTGGA...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGTCCGGCATTTAACATaGACTCTCCGTTGCGGATCC +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTVRHLT*TLRCGS
Trigger: GGATCCGCAACGGAGAGTCCATGTTAAATGCCGGAC...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGGTTGGCCTGTAGCATaGCTTCTGCCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRGWPVA*LLPSAA
Trigger: TGCAGCAGAAGGCAGAAGCCATGCTACAGGCCAACC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGATTCCAAAGCCTGCTTaGCACTCCTCTCAAAGACCA +
Preference number: 4 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWEIPKPA*HSSQRP
Trigger: TGGTCTTTGAGAGGAGTGCCAAGCAGGCTTTGGAAT...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGAACTCGCCATTGTCATaGATCCATTCCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWENSPLS*IHSKAC
Trigger: GCAGGCTTTGGAATGGATCCATGACAATGGCGAGTT...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTGCTTTGCAGTTATCTaGAACTCCTCGTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQCFAVI*NSSCSF
Trigger: GAAAGAGCACGAGGAGTTCCAGATAACTGCAAAGCA...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTTATCTCTGCCGCATaGGCATGCCCTTTTTCACAA +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSFISAA*ACPFSQ
Trigger: TTGTGAAAAAGGGCATGCCCATGCGGCAGAGATAAA...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGATGTCCAACATCCTCTaGCAACTGTTCATATTTTTC +
Preference number: 4 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVMSNIL*QLFIFF
Trigger: GAAAAATATGAACAGTTGCCAGAGGATGTTGGACAT...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGACCGAGGAGGAGGATTTaGAGAGAGTACCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRPRRRI*REYRCS
Trigger: TGAGCAGCGGTACTCTCTCCAAATCCTCCTCCTCGG...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCTGGAATGACGAATTCTaGGGGAACGTCATAAATGTA +
Preference number: 4 (lower is better)
Translates to: HCSLGSFLITFLNDRESAWNDEF*GNVINV
Trigger: TACATTTATGACGTTCCCCCAGAATTCGTCATTCCA...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACCCAAAGGTTAACAGTTaGCAGTGTCCCTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNPKVNS*QCPSGS
Trigger: GGATCCTGAGGGACACTGCCAACTGTTAACCTTTGG...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGACCTTCTTCTTCAGCTaGGAATGTTCCTCGATCATA +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQTFFFS*ECSSII
Trigger: TATGATCGAGGAACATTCTCAGCTGAAGAAGAAGGT...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAGCAAGCTTTACACCATaGATCCACGTTGCTCATATA +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIASFTP*IHVAHI
Trigger: TATATGAGCAACGTGGATTCATGGTGTAAAGCTTGC...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGACAGTCTAGCACCTGCTaGACGTCCTGCTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRQSSTC*TSCWKT
Trigger: TGTTTTCCAGCAGGACGTTCAGCAGGTGCTAGACTG...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATAATGCTCTGGCCCGATaGAGAGATTTCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHNALAR*RDFPTP
Trigger: AGGTGTGGGGAAATCTCTTCATCGGGCCAGAGCATT...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGAAGTCATTCATTTGCTaGGAAAGCTCATCATTCCAA +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLKSFIC*ESSSFQ
Trigger: TTGGAATGATGAGCTTTCTCAGCAAATGAATGACTT...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAACCTGCAGCGCGCTCTaGTGTGTTTTCTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRTCSAL*CVFSMA
Trigger: TGCCATTGAGAAAACACATCAGAGCGCGCTGCAGGT...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAATGTTCCAATATCAGCTaGGTAGAATCAGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKCSNIS*VESGLF
Trigger: AAATAAGCCTGATTCTACTCAGCTGATATTGGAACA...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTCCTTCAGTAACAGCTaGTACTTCATGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQSFSNS*YFMILC
Trigger: GCAGAGAATCATGAAGTATCAGCTGTTACTGAAGGA...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp CTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGTGACACTTGGACTAGATaGATGCAAAATGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLCRKFLMLRIGRTSFWCDTWTR*MQNEGL
Trigger: GAGACCTTCATTTTGCATTCATCTAGTCCAAGTGTC...ACACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR TCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGACAGATACCTTGTTGCTaGGTCCTTCCCGTGACTTCC +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRQIPCC*VLPVTS
Trigger: GGAAGTCACGGGAAGGACTCAGCAACAAGGTATCTG...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAATGTAGTTGGGATTaGGAAGCTTCACAGATACCT +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWKCSWD*EASQIP
Trigger: AGGTATCTGTGAAGCTTCTCAATCCCAACTACATTT...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGATTCAGATTAACAGCTaGTTGGCAGGTGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PALQKVFNATDRSNIILVIQINS*LAGERE
Trigger: TTCTCTTTCACCTGCCAATCAGCTGTTAATCTGAAT...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATGTATTCTGTCATGATTaGTGCGGGCCGGAAACGTTA +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDVFCHD*CGPETL
Trigger: TAACGTTTCCGGCCCGCAGCAATCATGACAGAATAC...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAACCATGAATCCACGTTaGTCATATACTTTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSITMNPR*SYTFRP
Trigger: AGGCCGAAAAGTATATGAGCAACGTGGATTCATGGT...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATGTTTGCTCAGAAATaGTTCTCCGTGGTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHMFAQK*FSVVLD
Trigger: ATCGAGAACCACGGAGAAGCATTTCTGAGCAAACAT...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACATGACGTTTCTGCAATaGTCTGGCCCGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNMTFLQ*SGPMKR
Trigger: TCTCTTCATCGGGCCAGAGCATTGCAGAAACGTCAT...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACATCCATTCCAAAGCCTaGTTGGCACTCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNIHSKA*LALLSK
Trigger: CTTTGAGAGGAGTGCCAAGCAGGCTTTGGAATGGAT...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGCATCTGAAACTTGTCTaGCCAAGTAACAAAACAATG +
Preference number: 4 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLHLKLV*PSNKTM
Trigger: CATTGTTTTGTTACTTGGGCAGACAAGTTTCAGATG...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGGTCAAAATAGGACCCTaGATGTTCCAATATCAGCTG +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQVKIGP*MFQYQL
Trigger: CAGCTGATATTGGAACATGCAGGGTCCTATTTTGAC...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGGTCAAAATAGGACCCTaGATGTTCCAATATCAGCTG +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSVKIGP*MFQYQL
Trigger: CAGCTGATATTGGAACATGCAGGGTCCTATTTTGAC...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATCTTCTTTCATAAGTaGCATGTAGCCCTCAACCAC +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHIFFHK*HVALNH
Trigger: GTGGTTGAGGGCTACATGGCACTTATGAAAGAAGAT...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAAGTTTGAGGTTGAATaGACGTTTCAGAAGCCACGT +
Preference number: 4 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQKFEVE*TFQKPR
Trigger: ACGTGGCTTCTGAAACGTGCATTCAACCTCAAACTT...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAGAAATGCTTCTCCGTaGTTCTCGATCCAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNRNASP*FSIQSS
Trigger: GCTAGACTGGATCGAGAACCACGGAGAAGCATTTCT...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGTGCTTTGCAGTTATCTaGAACTCCTCGTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWECFAVI*NSSCSF
Trigger: GAAAGAGCACGAGGAGTTCCAGATAACTGCAAAGCA...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACGTTATTCGCTGAACTaGTTTAATAAGGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKRYSLN*FNKVGR
Trigger: TCTTCCTACCTTATTAAACCAGTTCAGCGAATAACG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CCA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTCGTTATTCGCTGAACTaGTTTAATAAGGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGRYSLN*FNKVGR
Trigger: TCTTCCTACCTTATTAAACCAGTTCAGCGAATAACG...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATCTTCTTTTTATCAAGTaGTTCGCTGAATATGACGAT +
Preference number: 4 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADLLFIK*FAEYDD
Trigger: ATCGTCATATTCAGCGAACCACTTGATAAAAAGAAG...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CCA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATCTTCTTTTTATCAAGTaGTTCGCTGAATATGACGAT +
Preference number: 4 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNLLFIK*FAEYDD
Trigger: ATCGTCATATTCAGCGAACCACTTGATAAAAAGAAG...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATGGCCTTTGTTGTGTGTaGTCCAGTCAAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDGLCCV*SSQTSS
Trigger: AGAAGATGTTTGACTGGATCACACACAACAAAGGCC...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACGCAAGCTTTACACCATaGATCCACGTTGCTCATATA +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNASFTP*IHVAHI
Trigger: TATATGAGCAACGTGGATTCATGGTGTAAAGCTTGC...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCTCTTCAAAATCTTCATaGCGTTTCTGCAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSSSKSS*RFCNAL
Trigger: CAGAGCATTGCAGAAACGTCATGAAGATTTTGAAGA...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTATCTTTCACATGGGTGTaGAAGGACACTGACATGTCC +
Preference number: 4 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLSFTWV*KDTDMS
Trigger: GGACATGTCAGTGTCCTTTCACACCCATGTGAAAGA...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATGCTGCTCTGCAATCGTaGGATCTTCTGTGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHAALQS*DLLCRS
Trigger: ACTTCGACACAGAAGATCTCACGATTGCAGAGCAGC...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCGACAATTTTATTATCTaGAGTTGGTGTTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSDNFII*SWCSPH
Trigger: GTGGGGAGAACACCAACTTCAGATAATAAAATTGTC...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATGGTATCAATGTATTCTaGGACAATGTGCTCAGACTT +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHGINVF*DNVLRL
Trigger: AAGTCTGAGCACATTGTCTCAGAATACATTGATACC...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATGTTCTTTGTTTACAATaGCAGGTGGAATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHVLCLQ*QVESLP
Trigger: TGGAAGAGATTCCACCTGGCATTGTAAACAAAGAAC...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGCATCTGAAACTTGTCTaGCCAAGTAACAAAACAATG +
Preference number: 4 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWHLKLV*PSNKTM
Trigger: CATTGTTTTGTTACTTGGGCAGACAAGTTTCAGATG...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCACTTGGACTAGATGAATaGAAAATGAAGGTCTCTACC +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSLGLDE*KMKVST
Trigger: GGTAGAGACCTTCATTTTGCATTCATCTAGTCCAAG...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR GCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGCTTGGACTAGATGAATaGAAAATGAAGGTCTCTACC +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSLGLDE*KMKVST
Trigger: GGTAGAGACCTTCATTTTGCATTCATCTAGTCCAAG...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACTCAATCCATTCTTCGTaGTTGTATTCCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNSIHSS*LYSRQP
Trigger: TGGCTGCCTGGAATACAACCACGAAGAATGGATTGA...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATCCTTCTGGTGGAAAATaGAGGACATGTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHPSGGK*RTCPAR
Trigger: CCTTGCTGGACATGTCCTCCATTTTCCACCAGAAGG...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGTTTCTGCAATGCTCTaGCCCGATGAAGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTVSAML*PDEEIS
Trigger: GGAAATCTCTTCATCGGGCCAGAGCATTGCAGAAAC...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATAGATCTTGCCCTTGGTaGATGACGTCAAAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDRSCPW*MTSKVK
Trigger: CTTGACTTTTGACGTCATCCACCAAGGGCAAGATCT...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACACCCTGTTCTCCCGTTaGAAGAGTTCATTCAAGATA +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNTLFSR*KSSFKI
Trigger: TATCTTGAATGAACTCTTCCAACGGGAGAACAGGGT...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATGCCGTCTCTTCCTCATaGTCCAGTAATGCAATACCC +
Preference number: 4 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHAVSSS*SSNAIP
Trigger: GGGTATTGCATTACTGGACCATGAGGAAGAGACGGC...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAATTCTCTTTAAAGAGCTaGATTTCCTTTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKFSLKS*ISFLPS
Trigger: AGATGGAAGAAAGGAAATCCAGCTCTTTAAAGAGAA...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATACATGATTCTCTGCACTaGTTTGATCAACAGATCTGT +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIHDSLH*FDQQIC
Trigger: ACAGATCTGTTGATCAAACCAGTGCAGAGAATCATG...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATTGGAATGACGAATTCTaGGGGAACGTCATAAATGTA +
Preference number: 4 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHWNDEF*GNVINV
Trigger: TACATTTATGACGTTCCCCCAGAATTCGTCATTCCA...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGAGATTAACAGCTGATTaGCAGGTGAAAGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSERLTAD*QVKENE
Trigger: CTCATTCTCTTTCACCTGCCAATCAGCTGTTAATCT...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CCA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAAAACATCACCTTCGTTaGAAAAGTTTCCATCCACCT +
Preference number: 4 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIKHHLR*KSFHPP
Trigger: AGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTGCTATGAAAGCTCATaGAAATGTTCCAGAGATCTC +
Preference number: 4 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSCYESS*KCSRDL
Trigger: GAGATCTCTGGAACATTTCCATGAGCTTTCATAGCA...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGAAGTCATTCATTTGCTaGGAAAGCTCATCATTCCAA +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEKSFIC*ESSSFQ
Trigger: TTGGAATGATGAGCTTTCTCAGCAAATGAATGACTT...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGTGTTCCAATATCAGCTaGGTAGAATCAGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: RPKAGTVLYTSKAYISSECSNIS*VESGLF
Trigger: AAATAAGCCTGATTCTACTCAGCTGATATTGGAACA...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR TCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATGTTCCAATATCAGCTaGGTAGAATCAGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPCSNIS*VESGLF
Trigger: AAATAAGCCTGATTCTACTCAGCTGATATTGGAACA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR TCA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCACATCTTAGTTTGCTTTaGGTTGCTGTTGGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSHLSLL*VAVGSF
Trigger: AAAACTTCCAACAGCAACTCAAAGCAAACTAAGATG...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR GCA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTAACCTCATTGACATACTaGAGAAGATCTTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLTSLTY*RRSCPW
Trigger: CCAAGGGCAAGATCTTCTGCAGTATGTCAATGAGGT...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAAGGTGTTTCCGATGCTaGTCTGCGGCTAAATCCAAT +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRRCFRC*SAAKSN
Trigger: ATTGGATTTAGCCGCAGAGCAGCATCGGAAACACCT...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCACGCTGTTCCTGTaGAGGTATTTCAGGAAGACG +
Preference number: 4 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHFTLFL*RYFRKT
Trigger: CGTCTTCCTGAAATACCTGCACAGGAACAGCGTGAA...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCCGGAAACGTTAAAATaGGACCTCCACGTTTATCTC +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSPETLK*DLHVYL
Trigger: GAGATAAACGTGGAGGTCCCATTTTAACGTTTCCGG...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACATTTATCTCTGCCGCATaGGCATGCCCTTTTTCACAA +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTFISAA*ACPFSQ
Trigger: TTGTGAAAAAGGGCATGCCCATGCGGCAGAGATAAA...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGTTTACAATGCCAGGTaGAATCTCTTCCACGCCACT +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRVYNAR*NLFHAT
Trigger: AGTGGCGTGGAAGAGATTCCACCTGGCATTGTAAAC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAATGTCCAACATCCTCTaGCAACTGTTCATATTTTTC +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPMSNIL*QLFIFF
Trigger: GAAAAATATGAACAGTTGCCAGAGGATGTTGGACAT...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACCATTTCAGGACAGATTaGGAGGTTAAACTGAAGACA +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNHFRTD*EVKLKT
Trigger: TGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTAACTCAGGAGTTAGCTaGGAAGGATCAACTACTTTG +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSNSGVS*EGSTTL
Trigger: CAAAGTAGTTGATCCTTCTCAGCTAACTCCTGAGTT...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGCCACCGACATaGTGCGGTTTATATTTACAT +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTDWPPT*CGLYLH
Trigger: ATGTAAATATAAACCGCATCATGTCGGTGGCCAATC...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR TCA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACAAGTCATTCATTTGCTaGGAAAGCTCATCATTCCAA +
Preference number: 4 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNKSFIC*ESSSFQ
Trigger: TTGGAATGATGAGCTTTCTCAGCAAATGAATGACTT...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTACCATGAATCCACGTTaGTCATATACTTTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSTMNPR*SYTFRP
Trigger: AGGCCGAAAAGTATATGAGCAACGTGGATTCATGGT...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTATGTTTGCTCAGAAATaGTTCTCCGTGGTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSMFAQK*FSVVLD
Trigger: ATCGAGAACCACGGAGAAGCATTTCTGAGCAAACAT...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATGGTGTATGTGTTCTGTaGCACTTCTTCAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDGVCVL*HFFKIF
Trigger: GAAGATTTTGAAGAAGTGGCACAGAACACATACACC...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AGAAGCCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCAAGATATTTTTCACTTaGTGTTCAGGAGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: RSLLCRKFLMLRIGRTSFKIFFT*CSGALM
Trigger: CATCAAAGCTCCTGAACAGCAAGTGAAAAATATCTT...GAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGGCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAAAGATATTTTTCACTTaGTGTTCAGGAGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPKIFFT*CSGALM
Trigger: CATCAAAGCTCCTGAACAGCAAGTGAAAAATATCTT...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR GCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACGTTCTTTGTTTACAATaGCAGGTGGAATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNVLCLQ*QVESLP
Trigger: TGGAAGAGATTCCACCTGGCATTGTAAACAAAGAAC...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATTTTATAAAGGTACTTaGTTCTCCCACTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPFYKGT*FSHWNL
Trigger: AAGATTCCAGTGGGAGAAGCAAGTACCTTTATAAAA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CCA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTACTTTTCGGCCTTCTaGTGGAAAATGGAGGACATG +
Preference number: 4 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHYFSAF*WKMEDM
Trigger: CATGTCCTCCATTTTCCACCAGAAGGCCGAAAAGTA...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTAAGGAAGAAATGGAATTaGCTAATCCATGTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLRKKWN*LIHVAA
Trigger: AGCAGCGACATGGATTAGCCAATTCCATTTCTTCCT...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACCATCTGAAACTTGTCTaGCCAAGTAACAAAACAATG +
Preference number: 4 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNHLKLV*PSNKTM
Trigger: CATTGTTTTGTTACTTGGGCAGACAAGTTTCAGATG...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATAAGATATTTTTCACTTaGTGTTCAGGAGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDKIFFT*CSGALM
Trigger: CATCAAAGCTCCTGAACAGCAAGTGAAAAATATCTT...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAATGTCCAACATCCTCTaGCAACTGTTCATATTTTTC +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTMSNIL*QLFIFF
Trigger: GAAAAATATGAACAGTTGCCAGAGGATGTTGGACAT...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR GCA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACATTTTATAAAGGTACTTaGTTCTCCCACTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTFYKGT*FSHWNL
Trigger: AAGATTCCAGTGGGAGAAGCAAGTACCTTTATAAAA...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CCA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGATGTCCAAATAAAAGCTaGGTTTCAAAAACATCACCT +
Preference number: 4 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRCPNKS*VSKTSP
Trigger: AGGTGATGTTTTTGAAACCCAGCTTTTATTTGGACA...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS CCA 90 bp CCGGCGCCAGCCCACGGCCCGGCCCAGCGCGCGCCTCTCCCTCGCTaGCGTCTGAGCGCGCGCGCGCGCGCTGCAGTTGGGTTTCACAAG +
Preference number: 5 (lower is better)
Translates to: PAPAHGPAQRAPLPR*RLSARARAAVGFHK
Trigger: CTTGTGAAACCCAACTGCAGCGCGCGCGCGCGCGCTCAGACGCCAGCGAGGGAGAGGCGCGCGCTGGGCCGGGCCGTGGGCTGGCGCCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS TCA 90 bp CAGCCCACGGCCCGGCCCAGCGCGCGCCTCTCCCTCGCTGGCGTCTaGGCGCGCGCGCGCGCGCTGCAGTTGGGTTTCACAAGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: QPTARPSARLSLAGV*ARARALQLGFTSGN
Trigger: ATTCCCACTTGTGAAACCCAACTGCAGCGCGCGCGCGCGCGCTCAGACGCCAGCGAGGGAGAGGCGCGCGCTGGGCCGGGCCGTGGGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CCA 90 bp GGCCCTCGTTCCGGCCTCTCTCCTCGACCGTCTCGTCCTGCGGGGTaGCCGCACTGTCGTCGGAGTCCTTCTGCGAGCCGGCGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: GPRSGLSPRPSRPAG*PHCRRSPSASRRRR
Trigger: GCGCCGACGCCGGCTCGCAGAAGGACTCCGACGACAGTGCGGCCACCCCGCAGGACGAGACGGTCGAGGAGAGAGGCCGGAACGAGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CCA 90 bp GGAGTAGTTAGTAGCGCCGTGGGCCGGCCCGCAGGAGGGTTAGCCTaGTCCCAGGTAGAGGCCGCAACGGGCGGCGGAGAGCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GVVSSAVGRPAGGLA*SQVEAATGGGERWA
Trigger: TGCCCAGCGCTCTCCGCCGCCCGTTGCGGCCTCTACCTGGGACCAGGCTAACCCTCCTGCGGGCCGGCCCACGGCGCTACTAACTACTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515144.5
CDS GCA 90 bp CGGACCTCGCGGCTCTTCTTGTGCTTGTGCGCCAGCTTCTTCACGTaGCCGTCGGCCTTGCCGCTGCTGAGCCGCCGCACGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RTSRLFLCLCASFFT*PSALPLLSRRTGLV
Trigger: CACCAGCCCCGTGCGGCGGCTCAGCAGCGGCAAGGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 90 bp ACCGTCTCGTCCTGCGGGGTGGCCGCACTGTCGTCGGAGTCCTTCTaGGAGCCGGCGTCGGCGCTCTTGCGGACCTCGCGGCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TVSSCGVAALSSESF*EPASALLRTSRLFL
Trigger: CAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTCGCAGAAGGACTCCGACGACAGTGCGGCCACCCCGCAGGACGAGACGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CCA 90 bp GAGGCCTTGTCATCCTGTGAGTCTGGCTGGAGGAGGCTGTGCTGCTaGATGGCCATGGGTGGCGGCAGGGGCACGGCGTCGGCCCCCTCC +
Preference number: 5 (lower is better)
Translates to: EALSSCESGWRRLCC*MAMGGGRGTASAPS
Trigger: GGAGGGGGCCGACGCCGTGCCCCTGCCGCCACCCATGGCCATCCAGCAGCACAGCCTCCTCCAGCCAGACTCACAGGATGACAAGGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CCA 90 bp AGGCGTTCGCGGCGCCTTTCCTGGGGCTCTCCAGCACCTTCATCTTaGGGATCGGCTCCGCTTCTCGCTCGGACCCCTCGGCGTCCGCGC +
Preference number: 5 (lower is better)
Translates to: RRSRRLSWGSPAPSS*GSAPLLARTPRRPR
Trigger: GCGCGGACGCCGAGGGGTCCGAGCGAGAAGCGGAGCCGATCCCCAAGATGAAGGTGCTGGAGAGCCCCAGGAAAGGCGCCGCGAACGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000513206.5
ENST00000515144.5
CDS CCA 90 bp ACACTCAGACACAGACTGGGACGCGACAGGGACAGGCACACAGACTaGCAGCGTGTTGCTCAGCGGCCGGCGCCAGCCCACGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: TLRHRLGRDRDRHTD*QRVAQRPAPAHGPA
Trigger: GGCCGGGCCGTGGGCTGGCGCCGGCCGCTGAGCAACACGCTGCCAGTCTGTGTGCCTGTCCCTGTCGCGTCCCAGTCTGTGTCTGAGTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS-3UTR CAA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGGTGTTGCCCGGCCGCTaGGGGCCCGGCGAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PRQGHGSGRHLGASSPETVLPGR*GPGELW
Trigger: CCAGAGCTCGCCGGGCCCCAAGCGGCCGGGCAACAC...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGCTAGCGCGCGCGTCCTaGGCGGGGGCGTCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: PRQGHGSGRHLGASSPETLARAS*AGASGL
Trigger: GAGCCCAGACGCCCCCGCCAAGGACGCGCGCGCTAG...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS GCA 90 bp CCGGCGTCGGCGCTCTTGCGGACCTCGCGGCTCTTCTTGTGCTTGTaGGCCAGCTTCTTCACGTGCCCGTCGGCCTTGCCGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PASALLRTSRLFLCL*ASFFTCPSALPLLS
Trigger: GCTCAGCAGCGGCAAGGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 90 bp TGCGAGCCGGCGTCGGCGCTCTTGCGGACCTCGCGGCTCTTCTTGTaGTTGTGCGCCAGCTTCTTCACGTGCCCGTCGGCCTTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: CEPASALLRTSRLFL*LCASFFTCPSALPL
Trigger: CAGCGGCAAGGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 90 bp GAAGAGGCCTTGTCATCCTGTGAGTCTGGCTGGAGGAGGCTGTGCTaGTGGATGGCCATGGGTGGCGGCAGGGGCACGGCGTCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: EEALSSCESGWRRLC*WMAMGGGRGTASAP
Trigger: GGGGGCCGACGCCGTGCCCCTGCCGCCACCCATGGCCATCCAGCAGCACAGCCTCCTCCAGCCAGACTCACAGGATGACAAGGCCTCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 90 bp TGCTCTGGGTGGACTGCACGGACTGCTCGCTGGCCGAGGAGCACGTaGTCATGCGGTCAGTATCCTTGCCAGGGGCCGCGTGGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: CSGWTARTARWPRST*SCGQYPCQGPRGGV
Trigger: CACCCCGCCACGCGGCCCCTGGCAAGGATACTGACCGCATGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000513206.5
ENST00000515144.5
CDS-3UTR CAA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGTGTTGCCCGGCCGCTaGGGGCCCGGCGAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQVLPGR*GPGELW
Trigger: CCAGAGCTCGCCGGGCCCCAAGCGGCCGGGCAACAC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS GCA 90 bp CGAGAAGAGGCCTTGTCATCCTGTGAGTCTGGCTGGAGGAGGCTGTaGTGCTGGATGGCCATGGGTGGCGGCAGGGGCACGGCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: REEALSSCESGWRRL*CWMAMGGGRGTASA
Trigger: GGCCGACGCCGTGCCCCTGCCGCCACCCATGGCCATCCAGCAGCACAGCCTCCTCCAGCCAGACTCACAGGATGACAAGGCCTCTTCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 90 bp GCGCGCGCCTCTCCCTCGCTGGCGTCTGAGCGCGCGCGCGCGCGCTaGAGTTGGGTTTCACAAGTGGGAATACCCAGACGCGGTGGATTT +
Preference number: 5 (lower is better)
Translates to: ARASPSLASERARAR*SWVSQVGIPRRGGF
Trigger: AAATCCACCGCGTCTGGGTATTCCCACTTGTGAAACCCAACTGCAGCGCGCGCGCGCGCGCTCAGACGCCAGCGAGGGAGAGGCGCGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS-3UTR CAA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTGCTGCCGTCTCCTaGGCTGTCCAGATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: ANAATVTRALGTSRGAASAAAVS*AVQILS
Trigger: GGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGC...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCACACTTGCGCAGGGTGTaGCCCGGCCGCTTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSHLRRV*PGRLGP
Trigger: GGGCCCCAAGCGGCCGGGCAACACCCTGCGCAAGTG...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGCACTTGCGCAGGGTGTaGCCCGGCCGCTTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMHLRRV*PGRLGP
Trigger: GGGCCCCAAGCGGCCGGGCAACACCCTGCGCAAGTG...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS GCA 90 bp CCGCACTGTCGTCGGAGTCCTTCTGCGAGCCGGCGTCGGCGCTCTTaGGGACCTCGCGGCTCTTCTTGTGCTTGTGCGCCAGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: PHCRRSPSASRRRRS*GPRGSSCACAPASS
Trigger: TGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTCGCAGAAGGACTCCGACGACAGTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 90 bp GGCACGGCGTCGGCCCCCTCCTCGCCTTCCTCTTCTCCACAGCTCTaGATCCCCGAGGAGGAGGATTTGGAGAGAGTACCGCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GTASAPSSPSSSPQL*IPEEEDLERVPLLR
Trigger: CCTGAGCAGCGGTACTCTCTCCAAATCCTCCTCCTCGGGGATGCAGAGCTGTGGAGAAGAGGAAGGCGAGGAGGGGGCCGACGCCGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CCA 90 bp ACGCGCTTACCCCGTTGCTCTGGGTGGACTGCACGGACTGCTCGCTaGCCGAGGAGCACGTGCTCATGCGGTCAGTATCCTTGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: TRLPRCSGWTARTAR*PRSTCSCGQYPCQG
Trigger: CCCCTGGCAAGGATACTGACCGCATGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGGTAAGCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515144.5
CDS CCA 90 bp TTAGCCTGGTCCCAGGTAGAGGCCGCAACGGGCGGCGGAGAGCGCTaGGCAGCCGAGTTAGTGAGAACAGCCGCGGTGGCGTTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: LAWSQVEAATGGGER*AAELVRTAAVAFRA
Trigger: AGCTCTAAACGCCACCGCGGCTGTTCTCACTAACTCGGCTGCCCAGCGCTCTCCGCCGCCCGTTGCGGCCTCTACCTGGGACCAGGCTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515144.5
CDS-3UTR CAA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTAAGGGCCGCTGGAGCTaGTCAAGGAGCGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: ANAATVTRALGTSRGAASKGRWS*SRSDFP
Trigger: TGGGAAGTCGCTCCTTGACAAGCTCCAGCGGCCCTT...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTAGGTGCATGGCATCATaGGCTCGCTTCGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: ANAATVTRALGTSRGAASRCMAS*ARFGTL
Trigger: CAGCGTGCCGAAGCGAGCCAATGATGCCATGCACCT...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGGCAGCCGAGGGACGCTaGGCGGGGTCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVAAEGR*AGSSCR
Trigger: CCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGC...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCCCACCCCAGCGCAGCTaGCAGCTCTGTGTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGPPQRS*QLCVQA
Trigger: TGCTTGGACACAGAGCTGCAAGCTGCGCTGGGGTGG...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGATGTCGGCCAGGTCCTaGGCCGCCTCCTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVMSARS*AASSAP
Trigger: GGGGGCAGAGGAGGCGGCCAAGGACCTGGCCGACAT...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCAACATGGACTCTCCGTaGCGGATCCAACCCAGCACC +
Preference number: 5 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCNMDSP*RIQPST
Trigger: GGTGCTGGGTTGGATCCGCAACGGAGAGTCCATGTT...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCCTTGAGCATGAGCTGTaGCCAGTGAGACGCCACCTT +
Preference number: 5 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSLEHEL*PVRRHL
Trigger: AAGGTGGCGTCTCACTGGCAACAGCTCATGCTCAAG...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTTTTCCCGTCGAATCCTaGCAGCCGCCCCACGTTCAT +
Preference number: 5 (lower is better)
Translates to: ANAATVTRALGTSRGAASFPVES*QPPHVH
Trigger: ATGAACGTGGGGCGGCTGCAAGGATTCGACGGGAAA...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGCTAGCGCGCGCGTCCTaGGCGGGGGCGTCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLLARAS*AGASGL
Trigger: GAGCCCAGACGCCCCCGCCAAGGACGCGCGCGCTAG...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTAATCTGATTGACGGCTaGGGGCAGGAACAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: ANAATVTRALGTSRGAASNLIDG*GQEQGE
Trigger: CTCCCCCTGTTCCTGCCCCAAGCCGTCAATCAGATT...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTCCCAGCCTCCTTGAGTaGAAAGGACTCCCCACACCA +
Preference number: 5 (lower is better)
Translates to: ANAATVTRALGTSRGAASPSLLE*KGLPTP
Trigger: TGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGG...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS TCA 90 bp GAAAACCCACCACAGCAACCCTTGTGCTTGAGACGGCAGCATGAGTaGTGGGCCAAACGAGGCCAGAGCCCAGCAGGCCGCAGGGACCGG +
Preference number: 5 (lower is better)
Translates to: ENPPQQPLCLRRQHE*WAKRGQSPAGRRDR
Trigger: CCGGTCCCTGCGGCCTGCTGGGCTCTGGCCTCGTTTGGCCCATCACTCATGCTGCCGTCTCAAGCACAAGGGTTGCTGTGGTGGGTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000515144.5
CDS GCA 90 bp CACAGCTCTGCATCCCCGAGGAGGAGGATTTGGAGAGAGTACCGCTaGTCAGGCCCTCGTTCCGGCCTCTCTCCTCGACCGTCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: HSSASPRRRIWREYR*SGPRSGLSPRPSRP
Trigger: AGGACGAGACGGTCGAGGAGAGAGGCCGGAACGAGGGCCTGAGCAGCGGTACTCTCTCCAAATCCTCCTCCTCGGGGATGCAGAGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CCA 90 bp TGCTTTCACTCCCGTTGCTCTGGGTGGACTGCACGGACTGCTCGCTaGCCGAGGAGCACGTGCTCATGCGGTCAGTATCCTTGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: CFHSRCSGWTARTAR*PRSTCSCGQYPCQG
Trigger: CCCCTGGCAAGGATACTGACCGCATGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGAGTGAAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000513206.5
CDS CCA 90 bp GCCTCTCCCTCGCTGGCGTCTGAGCGCGCGCGCGCGCGCTGCAGTTaGGTTTCACAAGTGGGAATACCCAGACGCGGTGGATTTCATTCT +
Preference number: 5 (lower is better)
Translates to: ASPSLASERARARCS*VSQVGIPRRGGFHS
Trigger: AGAATGAAATCCACCGCGTCTGGGTATTCCCACTTGTGAAACCCAACTGCAGCGCGCGCGCGCGCGCTCAGACGCCAGCGAGGGAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS-3UTR CAA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCCGGCTCTTCTTGTGCTaGTGCGCCAGCTTCTTCACG +
Preference number: 5 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGRLFLC*CASFFT
Trigger: CGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCG...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGCCGGCGTCGGCGCTCTaGCGGACCTCGCGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKPASAL*RTSRLF
Trigger: GAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGG...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCCCCGAGGAGGAGGATTaGGAGAGAGTACCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPAPEEED*ERVPLL
Trigger: GAGCAGCGGTACTCTCTCCAAATCCTCCTCCTCGGG...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCACGTTCATCATGTCGTaGCACCGCCTGGGTACTATG +
Preference number: 5 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSTFIMS*HRLGTM
Trigger: CATAGTACCCAGGCGGTGCAACGACATGATGAACGT...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGACGTACCTGACATCTaGTCTGCCTCTGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGDVPDI*SASAWL
Trigger: GAGCCAGGCAGAGGCAGACAAGATGTCAGGTACGTC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp TCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCAAGCACACGAACTCCTaGGCCTTCTGGCTCACTCCT +
Preference number: 5 (lower is better)
Translates to: SVWTCRGRPCFCRCRPAAKHTNS*AFWLTP
Trigger: AGGAGTGAGCCAGAAGGCCAAGGAGTTCGTGTGCTT...GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGGCAGCCGAGGGACGCTaGGCGGGGTCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKAAEGR*AGSSCR
Trigger: CCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGC...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCCACCCCAGCGCAGCTaGCAGCTCTGTGTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQPPQRS*QLCVQA
Trigger: TGCTTGGACACAGAGCTGCAAGCTGCGCTGGGGTGG...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGACAGTGACTCGGGCATaGGGTACCAGCCGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVTVTRA*GTSRGA
Trigger: CGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGT...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS TCA 90 bp GAGGGAAAACCCACCACAGCAACCCTTGTGCTTGAGACGGCAGCATaGGTGATGGGCCAAACGAGGCCAGAGCCCAGCAGGCCGCAGGGA +
Preference number: 5 (lower is better)
Translates to: EGKPTTATLVLETAA*VMGQTRPEPSRPQG
Trigger: TCCCTGCGGCCTGCTGGGCTCTGGCCTCGTTTGGCCCATCACTCATGCTGCCGTCTCAAGCACAAGGGTTGCTGTGGTGGGTTTTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000515144.5
CDS TCA 90 bp AGTACTTGCAGGTGCCCGGCTGCCCGCCGCTGCAGTAGGCTGAACTaGCAGAGGACAGCGAGTCCAGCGTGTCCACTGGCTTCAATCCGT +
Preference number: 5 (lower is better)
Translates to: STCRCPAARRCSRLN*QRTASPACPLASIR
Trigger: ACGGATTGAAGCCAGTGGACACGCTGGACTCGCTGTCCTCTGTCAGTTCAGCCTACTGCAGCGGCGGGCAGCCGGGCACCTGCAAGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS TCA 90 bp GATCCAGTACTTGCAGGTGCCCGGCTGCCCGCCGCTGCAGTAGGCTaGACTGACAGAGGACAGCGAGTCCAGCGTGTCCACTGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: DPVLAGARLPAAAVG*TDRGQRVQRVHWLQ
Trigger: TTGAAGCCAGTGGACACGCTGGACTCGCTGTCCTCTGTCAGTTCAGCCTACTGCAGCGGCGGGCAGCCGGGCACCTGCAAGTACTGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS GCA 90 bp CTGCTGCTGCTTTCACTCCCGTTGCTCTGGGTGGACTGCACGGACTaGTCGCTGGCCGAGGAGCACGTGCTCATGCGGTCAGTATCCTTG +
Preference number: 5 (lower is better)
Translates to: LLLLSLPLLWVDCTD*SLAEEHVLMRSVSL
Trigger: CAAGGATACTGACCGCATGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGAGTGAAAGCAGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000513206.5
CDS CCA 90 bp TCTGGTGCAGATGCTGCCGTGTCGAGTGCAGCCGGTCCAGCATGGTaGACACCTTGGGCAAGAGGTTCTGCAGGTCCGCATTGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SGADAAVSSAAGPAW*TPWARGSAGPHCLS
Trigger: GCTCAGGCAATGCGGACCTGCAGAACCTCTTGCCCAAGGTGTCCACCATGCTGGACCGGCTGCACTCGACACGGCAGCATCTGCACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000504606.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
CDS CCA 90 bp CCACCTTCTCGGCGCAGTCCCGGATCATGTCCATGTCGTAGTGGTTaGCCTGTAGCATGGCTTCTGCCTTCTGCTGCACCTGCAGCGCGC +
Preference number: 5 (lower is better)
Translates to: PPSRRSPGSCPCRSG*PVAWLLPSAAPAAR
Trigger: GCGCGCTGCAGGTGCAGCAGAAGGCAGAAGCCATGCTACAGGCCAACCACTACGACATGGACATGATCCGGGACTGCGCCGAGAAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS-3UTR CAA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCGAGCGACTTCCCATCTaGGCTGACCTCAGAATAAGC +
Preference number: 5 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCERLPI*ADLRIS
Trigger: GCTTATTCTGAGGTCAGCCAAGATGGGAAGTCGCTC...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTACGCCGAACGAAATCTaGAATCCGGTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: ANAATVTRALGTSRGAASTPNEI*NPVFQL
Trigger: CAGCTGGAAGACCGGATTCAAGATTTCGTTCGGCGT...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GCCCTCAGCTGCGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTTAGGTGCATGGCATCATaGGCTCGCTTCGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: ALSCGALVSGGSEHQKHVRCMAS*ARFGTL
Trigger: CAGCGTGCCGAAGCGAGCCAATGATGCCATGCACCT...AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGAGACACCAGTCAGGCTaGTCATGCGGCCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQRHQSG*SCGRSR
Trigger: TCTGGAGCGGCCGCATGACAAGCCTGACTGGTGTCT...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTCTGGGGAGCGGTCAGTaGTCCGCACCAGACACCAGT +
Preference number: 5 (lower is better)
Translates to: APLNEGSQSGRVEDARASLGSGQ*SAPDTS
Trigger: ACTGGTGTCTGGTGCGGACAACTGACCGCTCCCCAG...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GCCCTCAGCTGCGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTTACCTCGCGGCTCTTCTaGTGCTTGTGCGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: ALSCGALVSGGSEHQKHVTSRLF*CLCASF
Trigger: GAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGT...AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCACGTTCATCATGTCGTaGCACCGCCTGGGTACTATG +
Preference number: 5 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCTFIMS*HRLGTM
Trigger: CATAGTACCCAGGCGGTGCAACGACATGATGAACGT...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS TCA 90 bp TCCCTCCTTCCCTTCTGTCTTGTGGCGGGAGCGGTCTTAGGGATGTaGATGGGCTCCTTCAGGGCTCCCTTCAGGTGGATCGTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SLLPFCLVAGAVLGM*MGSFRAPFRWIVRS
Trigger: GGAGCGGACGATCCACCTGAAGGGAGCCCTGAAGGAGCCCATTCACATCCCTAAGACCGCTCCCGCCACAAGACAGAAGGGAAGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 90 bp GATGCCCTCCATTTCCATGCTACTTCTGGAGTGGGCGATGCACAGTaGACCACAGGGGACCAGGCCTTCTGCCGCTGGGGAGCGGTCAGT +
Preference number: 5 (lower is better)
Translates to: DALHFHATSGVGDAQ*TTGDQAFCRWGAVS
Trigger: ACTGACCGCTCCCCAGCGGCAGAAGGCCTGGTCCCCTGTGGTTCACTGTGCATCGCCCACTCCAGAAGTAGCATGGAAATGGAGGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344204.9
ENST00000507714.1
ENST00000509354.1
ENST00000512070.6
ENST00000512979.1
ENST00000513206.5
ENST00000515144.5
CDS GCA 90 bp CCTGCTGGAAAACACACAGCTGCAGCCTCTGATGCAGCCGGACCTTaGGGTGTTGCCAGATGTTCTCCAGCTGCCGCTGGTGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PAGKHTAAASDAAGP*GVARCSPAAAGGAA
Trigger: TGCTGCACCACCAGCGGCAGCTGGAGAACATCTGGCAACACCGCAAGGTCCGGCTGCATCAGAGGCTGCAGCTGTGTGTTTTCCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 90 bp TCACCCAGAAGGGTTGCTGTTAGGGTCTCAGACAGGCACAGGGCCTaGGCAGGCCCGGGACTCACCCACATCTCCTTTCCTGCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: SPRRVAVRVSDRHRA*AGPGLTHISFPAFP
Trigger: GGGAAAAGCAGGAAAGGAGATGTGGGTGAGTCCCGGGCCTGCGCAGGCCCTGTGCCTGTCTGAGACCCTAACAGCAACCCTTCTGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508343.1
CDS GCA 90 bp TCTGAGACGTCCGTGAGGCGATGGAAATCGTATCAGGCTGGCTGCTaGCGTCTCCTTGGCTGTCCAGATCCTCTCCATCCCTGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: SETSVRRWKSYQAGC*RLLGCPDPLHPWRC
Trigger: GCACCGCCAGGGATGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTCCATCGCCTCACGGACGTCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS CCA 90 bp GATGCTGCCGTGTCGAGTGCAGCCGGTCCAGCATGGTGGACACCTTaGGCAAGAGGTTCTGCAGGTCCGCATTGCCTGAGCCTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: DAAVSSAAGPAWWTP*ARGSAGPHCLSLSS
Trigger: AGAACTCAGGCTCAGGCAATGCGGACCTGCAGAACCTCTTGCCCAAGGTGTCCACCATGCTGGACCGGCTGCACTCGACACGGCAGCATC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000504606.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
CDS CCA 90 bp GCAGAGGCTGTCAGGGAATCGGAGCTGCCGGGAGTCAAGGGCCGCTaGAGCTTGTCAAGGAGCGACTTCCCATCTTGGCTGACCTCAGAA +
Preference number: 5 (lower is better)
Translates to: AEAVRESELPGVKGR*SLSRSDFPSWLTSE
Trigger: TTCTGAGGTCAGCCAAGATGGGAAGTCGCTCCTTGACAAGCTCCAGCGGCCCTTGACTCCCGGCAGCTCCGATTCCCTGACAGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS-3UTR CAA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCATCCATTCTTCGTGGTaGTATTCCAGGCAGCCATCA +
Preference number: 5 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSIHSSW*YSRQPS
Trigger: TGATGGCTGCCTGGAATACAACCACGAAGAATGGAT...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCAGGAAGAGCTCCAGCTaGATCTTGCGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KEVSLDVSRTPVLLPLPARKSSS*ILRSWK
Trigger: CTTCCAGGAGCGCAAGATCAAGCTGGAGCTCTTCCT...GGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GCCCTCAGCTGCGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTTAACATGGACTCTCCGTaGCGGATCCAACCCAGCACC +
Preference number: 5 (lower is better)
Translates to: ALSCGALVSGGSEHQKHVNMDSP*RIQPST
Trigger: GGTGCTGGGTTGGATCCGCAACGGAGAGTCCATGTT...AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGTTCTGCTCCAGGTGCTaGCTGATCATGGGCGTCACG +
Preference number: 5 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQFCSRC*LIMGVT
Trigger: CGTGACGCCCATGATCAGCAAGCACCTGGAGCAGAA...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp GACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTTTATCCAGTCCTGCTaGTTCTCTATGCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: DVSRTPVLLPLPACSHCSFIQSC*FSMLEA
Trigger: GGCTTCCAGCATAGAGAACAAGCAGGACTGGATAAA...GGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTTCCAGGCTGGCCTTTTaGGAATACTTGAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: ANAATVTRALGTSRGAASSRLAF*EYLRKS
Trigger: GGACTTCCTCAAGTATTCCAAAAAGGCCAGCCTGGA...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGATGCGGTCAGTATCCTaGCCAGGGGCCGCGTGGCGG +
Preference number: 5 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLMRSVS*PGAAWR
Trigger: CCGCCACGCGGCCCCTGGCAAGGATACTGACCGCAT...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTTCACGAAAAGTCTCTTaGAACCGATGGCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: ANAATVTRALGTSRGAASSRKVS*NRWHRA
Trigger: AGCCCTGTGCCATCGGTTCAAAGAGACTTTTCGTGA...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS GCA 90 bp TGTTCTGAGACGTCCGTGAGGCGATGGAAATCGTATCAGGCTGGCTaGTGCCGTCTCCTTGGCTGTCCAGATCCTCTCCATCCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: CSETSVRRWKSYQAG*CRLLGCPDPLHPWR
Trigger: CCGCCAGGGATGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTCCATCGCCTCACGGACGTCTCAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS GCA 90 bp AACACCAAGGCTCGGGTGAGCTGCTGTGGTTGGCAATCCTCTGTCTaGCTGACTCCACTGGGAGAGCATGGCTGGCAGCTTGAACCAGGC +
Preference number: 5 (lower is better)
Translates to: NTKARVSCCGWQSSV*LTPLGEHGWQLEPG
Trigger: GCCTGGTTCAAGCTGCCAGCCATGCTCTCCCAGTGGAGTCAGGCAGACAGAGGATTGCCAACCACAGCAGCTCACCCGAGCCTTGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS-3UTR CAA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGACTCCACCAGACGATaGGCCACCGACATGATGCGG +
Preference number: 5 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQDSTRR*ATDMMR
Trigger: CCGCATCATGTCGGTGGCCAATCGTCTGGTGGAGTC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp GCCCTCAGCTGCGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTTCCTTCCTTGATCACGTaGACAGTCACCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ALSCGALVSGGSEHQKHVPSLIT*TVTCRV
Trigger: CACCCTGCAGGTGACTGTCAACGTGATCAAGGAAGG...AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGAGGTCCTCCCCTTCCTaGATCACGTTGACAGTCACC +
Preference number: 5 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSERSSPS*ITLTVT
Trigger: GGTGACTGTCAACGTGATCAAGGAAGGGGAGGACCT...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGAGGCGTTGACGAGCTaGAGGCGATCTTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQEALTS*RRSSIL
Trigger: CAAGATGGAAGATCGCCTCAAGCTCGTCAACGCCTC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGGAGGCGTTGACGAGCTaGAGGCGATCTTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSEEALTS*RRSSIL
Trigger: CAAGATGGAAGATCGCCTCAAGCTCGTCAACGCCTC...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTGCTGTTCAGGAGCTTaGATGTGCGTCACCATTCCT +
Preference number: 5 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGCCSGA*MCVTIP
Trigger: AGGAATGGTGACGCACATCAAAGCTCCTGAACAGCA...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGGTCAGCTCGTTGCTGTaGCAAGCGGTGAAGTCATGG +
Preference number: 5 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQVSSLL*QAVKSW
Trigger: CCATGACTTCACCGCTTGCAACAGCAACGAGCTGAC...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCCACTTGCGCAGGGTGTaGCCCGGCCGCTTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: SSLKCTLQTASGQAPWICHLRRV*PGRLGP
Trigger: GGGCCCCAAGCGGCCGGGCAACACCCTGCGCAAGTG...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GCTATCCTGCAGTTGTGCAGGTACCGGACAGCTTCCAGAACCTCCCCCAGGTGCCGGCTCTTCTTGTGCTaGTGCGCCAGCTTCTTCACG +
Preference number: 5 (lower is better)
Translates to: AILQLCRYRTASRTSPRCRLFLC*CASFFT
Trigger: CGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCG...GCACCTGGGGGAGGTTCTGGAAGCTGTCCGGTACCTGCACAACTGCAGGATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACCGGCGTCGGCGCTCTaGCGGACCTCGCGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: SLKCTLQTASGQAPWICRPASAL*RTSRLF
Trigger: GAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGG...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTCCTCCAGTGCCATCTaGCTTTTCACGAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGSSSAI*LFTSSS
Trigger: TGAGGAACTCGTGAAAAGCAAGATGGCACTGGAGGA...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp ACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCACTGCTCCTCAGAAGTCCTGCATCTaGGTCTGTGACCAAGAATGT +
Preference number: 5 (lower is better)
Translates to: TCRGRPCFCRCRPAATAPQKSCI*VCDQEC
Trigger: ACATTCTTGGTCACAGACCAAGATGCAGGACTTCTG...AGGAGCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACTTCATGGATCCAAGTTaGCCGGACACTTGGACTAGA +
Preference number: 5 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNFMDPS*PDTWTR
Trigger: TCTAGTCCAAGTGTCCGGCAAACTTGGATCCATGAA...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCGTTGCTGGCCAGAATTaGAACGACCTCTCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGVAGQN*NDLSLV
Trigger: TACCAAGGAGAGGTCGTTCAAATTCTGGCCAGCAAC...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCACAGGTAATTGAGGCTTaGGGGCGGCCACAGACTCGA +
Preference number: 5 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSQVIEA*GRPQTR
Trigger: TCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTG...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp GCGAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTCCAAAGTCAGCCAGTTaGATGGTTGGCTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: ANAATVTRALGTSRGAASPKSAS*MVGLAK
Trigger: TTTAGCCAAGCCAACCATCAAACTGGCTGACTTTGG...ACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATGCAGCCGAGGGACGCTaGGCGGGGTCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNAAEGR*AGSSCR
Trigger: CCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGC...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS TCA 90 bp TGGGAGGCCTCACCATCTTGCTTTTCACGAGTTCCTCAATTGCACTaGCGAGCTCGGCTGCACTCGGTGTTTCGGAGCTGGTGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: WEASPSCFSRVPQLH*RARLHSVFRSWWGG
Trigger: TCCGCCCCACCAGCTCCGAAACACCGAGTGCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTGAAAAGCAAGATGGTGAGGCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS GCA 90 bp CGAGCAAGGGTGCAAGCCTTCAGGAATGCCTCCTTCTGCTCCAGGTaGTTGCTGATCATGGGCGTCACGTGGTCCGTCTCAGAGTTTGGG +
Preference number: 5 (lower is better)
Translates to: RARVQAFRNASFCSR*LLIMGVTWSVSEFG
Trigger: CCCAAACTCTGAGACGGACCACGTGACGCCCATGATCAGCAAGCACCTGGAGCAGAAGGAGGCATTCCTGAAGGCTTGCACCCTTGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 90 bp GGGGCGATCCTCCAGTGCCATCTTGCTTTTCACGAGTTCCTCAATTaGACTGACGAGCTCGGCTGCACTCGGTGTTTCGGAGCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: GAILQCHLAFHEFLN*TDELGCTRCFGAGG
Trigger: CCCACCAGCTCCGAAACACCGAGTGCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTGAAAAGCAAGATGGCACTGGAGGATCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000639876.2
CDS GCA 90 bp GCGTCTGAGCCCAAACAGACACTCAACACCAAGGCTCGGGTGAGCTaGTGTGGTTGGCAATCCTCTGTCTGCCTGACTCCACTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: ASEPKQTLNTKARVS*CGWQSSVCLTPLGE
Trigger: CTCTCCCAGTGGAGTCAGGCAGACAGAGGATTGCCAACCACAGCAGCTCACCCGAGCCTTGGTGTTGAGTGTCTGTTTGGGCTCAGACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CCA 90 bp GGGAAGGCCAGGTGTGTACGCACATTTCTAAGACCAGGATGTAGCTaGTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: GKARCVRTFLRPGCS*WGSQRCRGGRQAGG
Trigger: ACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCACCAGCTACATCCTGGTCTTAGAAATGTGCGTACACACCTGGCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508283.5
CDS CCA 90 bp CGAGTCCAGCGTGTCCACTGGCTTCAATCCGTTGGGCATGGTGACTaGAGCCGACTGGAGGCTAAAGGTGCAGAACCCCTATCCTACCTC +
Preference number: 5 (lower is better)
Translates to: RVQRVHWLQSVGHGD*SRLEAKGAEPLSYL
Trigger: GAGGTAGGATAGGGGTTCTGCACCTTTAGCCTCCAGTCGGCTCCAGTCACCATGCCCAACGGATTGAAGCCAGTGGACACGCTGGACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS CCA 90 bp CCCAAACAGACACTCAACACCAAGGCTCGGGTGAGCTGCTGTGGTTaGCAATCCTCTGTCTGCCTGACTCCACTGGGAGAGCATGGCTGG +
Preference number: 5 (lower is better)
Translates to: PKQTLNTKARVSCCG*QSSVCLTPLGEHGW
Trigger: CCAGCCATGCTCTCCCAGTGGAGTCAGGCAGACAGAGGATTGCCAACCACAGCAGCTCACCCGAGCCTTGGTGTTGAGTGTCTGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS-3UTR CAA 90 bp TCAGGGCCCTTCCAGGTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAGACTCCACCAGACGATaGGCCACCGACATGATGCGG +
Preference number: 5 (lower is better)
Translates to: SGPFQVIEALGRPQTRHLDSTRR*ATDMMR
Trigger: CCGCATCATGTCGGTGGCCAATCGTCTGGTGGAGTC...TAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CCGGACAGCTTCCAGAACCTCCCCCAGGTGCGCCCTGATCTTCCCTTCAGTGAGACGCCGAACGAAATCTaGAATCCGGTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PDSFQNLPQVRPDLPFSETPNEI*NPVFQL
Trigger: CAGCTGGAAGACCGGATTCAAGATTTCGTTCGGCGT...CTCACTGAAGGGAAGATCAGGGCGCACCTGGGGGAGGTTCTGGAAGCTGTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCAAGGTCCTCCCCTTCCTaGATCACGTTGACAGTCACC +
Preference number: 5 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSRSSPS*ITLTVT
Trigger: GGTGACTGTCAACGTGATCAAGGAAGGGGAGGACCT...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp CCTAGACAAGGCCATGGGAGTGGCCGCCACCTAGGTGCGTCTTCCCCAGAGACGATACTGCAGAAGATCTaGCCCTTGGTGGATGACGTC +
Preference number: 5 (lower is better)
Translates to: PRQGHGSGRHLGASSPETILQKI*PLVDDV
Trigger: GACGTCATCCACCAAGGGCAAGATCTTCTGCAGTAT...CGTCTCTGGGGAAGACGCACCTAGGTGGCGGCCACTCCCATGGCCTTGTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCTGCTGCCGTCTCCTaGGCTGTCCAGATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLAAAVS*AVQILS
Trigger: GGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGC...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCGGGCTGGTGAGCCACTaGCGCAGGGTGTTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: SSLKCTLQTASGQAPWICGLVSH*RRVLPG
Trigger: GCCGGGCAACACCCTGCGCAAGTGGCTCACCAGCCC...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TCAGTGAGGCTTCCCCATCGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCTCCTCTGGTACTCGATaGGCGATGTCAAGGCATTTA +
Preference number: 5 (lower is better)
Translates to: SVRLPHRTTQSRRRPWSASSGTR*AMSRHL
Trigger: TAAATGCCTTGACATCGCCAATCGAGTACCAGAGGA...GGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCGATGGGGAAGCCTCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCCCAAAGTCAGCCAGTTaGATGGTTGGCTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGPKSAS*MVGLAK
Trigger: TTTAGCCAAGCCAACCATCAAACTGGCTGACTTTGG...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCAAAGCACACGAACTCCTaGGCCTTCTGGCTCACTCCT +
Preference number: 5 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSKHTNS*AFWLTP
Trigger: AGGAGTGAGCCAGAAGGCCAAGGAGTTCGTGTGCTT...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTCCCGTGCTTCTGCCGTaGCCGGCCTGCAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSPVLLP*PACSHC
Trigger: GCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGG...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS TCA 90 bp GATCCTCCAGTGCCATCTTGCTTTTCACGAGTTCCTCAATTGCACTaGCGAGCTCGGCTGCACTCGGTGTTTCGGAGCTGGTGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: DPPVPSCFSRVPQLH*RARLHSVFRSWWGG
Trigger: TCCGCCCCACCAGCTCCGAAACACCGAGTGCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTGAAAAGCAAGATGGCACTGGAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000639876.2
CDS TCA 90 bp GAAGCAGGAAACAGAGGGAAAACCCACCACAGCAACCCTTGTGCTTaGGACGGCAGCATGAGTGATGGGCCAAACGAGGCCAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: EAGNRGKTHHSNPCA*DGSMSDGPNEARAQ
Trigger: CTGGGCTCTGGCCTCGTTTGGCCCATCACTCATGCTGCCGTCTCAAGCACAAGGGTTGCTGTGGTGGGTTTTCCCTCTGTTTCCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000515144.5
CDS GCA 90 bp TGTTCTGAGACGTCCGTGAGGCGATGGAAATCGTATCAGGCTGGCTaGTGCCGTCTCCTTGGCTGTCCAGATCCTCTCCATCCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CSETSVRRWKSYQAG*CRLLGCPDPLHPSF
Trigger: GAAGGAGGGATGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTCCATCGCCTCACGGACGTCTCAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 90 bp CGCAGTCCCGGATCATGTCCATGTCGTAGTGGTTGGCCTGTAGCATaGCTTCTGCCTTCTGCTGCACCTGCAGCGCGCTCTGATGTGTTT +
Preference number: 5 (lower is better)
Translates to: RSPGSCPCRSGWPVA*LLPSAAPAARSDVF
Trigger: AAACACATCAGAGCGCGCTGCAGGTGCAGCAGAAGGCAGAAGCCATGCTACAGGCCAACCACTACGACATGGACATGATCCGGGACTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 90 bp GCGGGTGGACTGGCGTCATTGCTGGAGACGGAGAGCGAGTCTTTGTaGTTGAAGATGCCCTCCATTTCCATGCTACTTCTGGAGTGGGCG +
Preference number: 5 (lower is better)
Translates to: AGGLASLLETESESL*LKMPSISMLLLEWA
Trigger: CGCCCACTCCAGAAGTAGCATGGAAATGGAGGGCATCTTCAACCACAAAGACTCGCTCTCCGTCTCCAGCAATGACGCCAGTCCACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 90 bp GTGTCCACTGGCTTCAATCCGTTGGGCATGGTGACTGGAGCCGACTaGAGGCTAAAGGTGCAGAACCCCTATCCTACCTCTCCCTCCACA +
Preference number: 5 (lower is better)
Translates to: VSTGFNPLGMVTGAD*RLKVQNPYPTSPST
Trigger: TGTGGAGGGAGAGGTAGGATAGGGGTTCTGCACCTTTAGCCTCCAGTCGGCTCCAGTCACCATGCCCAACGGATTGAAGCCAGTGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS-3UTR CAA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGAAAGCGACAGAGGCGTaGACGAGCTTGAGGCGATCT +
Preference number: 5 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVKATEA*TSLRRS
Trigger: AGATCGCCTCAAGCTCGTCAACGCCTCTGTCGCTTT...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGGGTCCGTCTCAGAGTTaGGGCCCAGCTTATCCGCCC +
Preference number: 5 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGGPSQS*GPAYPP
Trigger: GGGCGGATAAGCTGGGCCCAAACTCTGAGACGGACC...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCATTCCAAAGCCTGCTaGGCACTCCTCTCAAAGACC +
Preference number: 5 (lower is better)
Translates to: VLEALQDAKLMGDLVALHHSKAC*ALLSKT
Trigger: GGTCTTTGAGAGGAGTGCCAAGCAGGCTTTGGAATG...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTGCCGTTGCCGGCCTGCAGCCAGCTTCACTCTCTCTTaGGTTTGCTTTGCAGTTATC +
Preference number: 5 (lower is better)
Translates to: SVWTCRGRPCFCRCRPAASFTLS*VCFAVI
Trigger: GATAACTGCAAAGCAAACCAAAGAGAGAGTGAAGCT...GGCTGCAGGCCGGCAACGGCAGAAGCACGGGCGTCCTCGACACGTCCAGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TCAGGGCCCTTCCAGGTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTACGGATGGTCAGCTCGTaGCTGTTGCAAGCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SGPFQVIEALGRPQTRHLRMVSS*LLQAVK
Trigger: CTTCACCGCTTGCAACAGCAACGAGCTGACCATCCG...TAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAACTGGGGAGCGGTCAGTaGTCCGCACCAGACACCAGT +
Preference number: 5 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKLGSGQ*SAPDTS
Trigger: ACTGGTGTCTGGTGCGGACAACTGACCGCTCCCCAG...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GCCCTCAGCTGCGGGGCACTGGTCAGTGGCGGCTCGGAACACCAGAAACATGTTAGCGAGTCTTTGTGGTaGAAGATGCCCTCCATTTCC +
Preference number: 5 (lower is better)
Translates to: ALSCGALVSGGSEHQKHVSESLW*KMPSIS
Trigger: GGAAATGGAGGGCATCTTCAACCACAAAGACTCGCT...AACATGTTTCTGGTGTTCCGAGCCGCCACTGACCAGTGCCCCGCAGCTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGGTGTTGCCCGGCCGCTaGGGGCCCGGCGAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWVLPGR*GPGELW
Trigger: CCAGAGCTCGCCGGGCCCCAAGCGGCCGGGCAACAC...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATGGGCTGGTGAGCCACTaGCGCAGGGTGTTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADGLVSH*RRVLPG
Trigger: GCCGGGCAACACCCTGCGCAAGTGGCTCACCAGCCC...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGCCGGCGTCGGCGCTCTaGCGGACCTCGCGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLPASAL*RTSRLF
Trigger: GAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGG...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCGCCTTTTTGGAATACTaGAGGAAGTCCTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCAFLEY*RKSFSN
Trigger: GTTACTGAAGGACTTCCTCAAGTATTCCAAAAAGGC...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp GAATGCTGCCACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCCAAAGGCAACTCACCTaGATACTGTTCTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: ECCHSDSGIGYQPRGGQCQRQLT*ILFLNR
Trigger: CCTGTTTAAGAACAGTATCAAGGTGAGTTGCCTTTG...GCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTGGCAGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AGCGCAGCCGAGGGACGCTTGGCGGGGTCCTCCTGCAGGAGGAAGCACACGAACCAAAGGCAACTCACCTaGATACTGTTCTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: SAAEGRLAGSSCRRKHTNQRQLT*ILFLNR
Trigger: CCTGTTTAAGAACAGTATCAAGGTGAGTTGCCTTTG...GTTCGTGTGCTTCCTCCTGCAGGAGGACCCCGCCAAGCGTCCCTCGGCTGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGCTGCTTTCACTCCCGTaGCTCTGGGTGGACTGCACG +
Preference number: 5 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLLLSLP*LWVDCT
Trigger: CGTGCAGTCCACCCAGAGCAACGGGAGTGAAAGCAG...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATCCCGTGCTTCTGCCGTaGCCGGCCTGCAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADPVLLP*PACSHC
Trigger: GCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGG...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACCCACCCCAGCGCAGCTaGCAGCTCTGTGTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNPPQRS*QLCVQA
Trigger: TGCTTGGACACAGAGCTGCAAGCTGCGCTGGGGTGG...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCCCTACCGTCGAATCCTaGCAGCCGCCCCACGTTCAT +
Preference number: 5 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTPTVES*QPPHVH
Trigger: ATGAACGTGGGGCGGCTGCAAGGATTCGACGGTAGG...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000620511.1
CDS GCA 90 bp TTCTCTGGGAGGCCTCACCATCTTGCTTTTCACGAGTTCCTCAATTaGACTGACGAGCTCGGCTGCACTCGGTGTTTCGGAGCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: FSGRPHHLAFHEFLN*TDELGCTRCFGAGG
Trigger: CCCACCAGCTCCGAAACACCGAGTGCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTGAAAAGCAAGATGGTGAGGCCTCCCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CCA 90 bp CATATCAGCCTTCGTGAGTGCCTGCTGCTGCCAGGATGCGGACAATaGTTAAGGCACCCTTCACCGAGCACAGGCTTTCTGCTAGGCACT +
Preference number: 5 (lower is better)
Translates to: HISLRECLLLPGCGQ*LRHPSPSTGFLLGT
Trigger: AGTGCCTAGCAGAAAGCCTGTGCTCGGTGAAGGGTGCCTTAACCATTGTCCGCATCCTGGCAGCAGCAGGCACTCACGAAGGCTGATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS CCA 90 bp CGTGAGGCGATGGAAATCGTATCAGGCTGGCTGCTGCCGTCTCCTTaGCTGTCCAGATCCTCTCCATCCCTGGCGGTGCAAAGAAACTTT +
Preference number: 5 (lower is better)
Translates to: REAMEIVSGWLLPSP*LSRSSPSLAVQRNF
Trigger: AAAGTTTCTTTGCACCGCCAGGGATGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTCCATCGCCTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS-3UTR CAA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGTTGATGGAGTCCCACTaGGACCCACGCATGTCCACG +
Preference number: 5 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKLMESH*DPRMST
Trigger: CGTGGACATGCGTGGGTCCAAGTGGGACTCCATCAA...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp CTCTGCCTTGGGCAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGATCCATTCTTCGTGGTaGTATTCCAGGCAGCCATCA +
Preference number: 5 (lower is better)
Translates to: LCLGQSVSDGPPPQRSLQIHSSW*YSRQPS
Trigger: TGATGGCTGCCTGGAATACAACCACGAAGAATGGAT...CTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTGCCCAAGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp TTGAGAGTCCCGTCCGGGTTCTCCACGATGACTGCACTGGTGTGGCCCAGGACAGAGGCCTGGACCTCATaGACATACTGCAGAAGATCT +
Preference number: 5 (lower is better)
Translates to: LRVPSGFSTMTALVWPRTEAWTS*TYCRRS
Trigger: AGATCTTCTGCAGTATGTCAATGAGGTCCAGGCCTC...TGTCCTGGGCCACACCAGTGCAGTCATCGTGGAGAACCCGGACGGGACTCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GAGGGTGCCCAGAAACCCAGCCTCCTTGAGTTGAAAGGACTCCCCACACCAGTGGGTCCTGGACCCGAGTaGCCATGTCTACATCTCTAT +
Preference number: 5 (lower is better)
Translates to: EGAQKPSLLELKGLPTPVGPGPE*PCLHLY
Trigger: ATAGAGATGTAGACATGGCAACTCGGGTCCAGGACC...CACTGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGGTTTCTGGGCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACGCTGCTGCCGTCTCCTaGGCTGTCCAGATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDAAAVS*AVQILS
Trigger: GGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGC...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACAGACACCAGTCAGGCTaGTCATGCGGCCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNRHQSG*SCGRSR
Trigger: TCTGGAGCGGCCGCATGACAAGCCTGACTGGTGTCT...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGACGTGCCCGTCGGCCTaGCCGCTGCTGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQTCPSA*PLLSRR
Trigger: GCGGCGGCTCAGCAGCGGCAAGGCCGACGGGCACGT...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AGAAGCCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCACGTGCCCGTCGGCCTaGCCGCTGCTGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RSLLCRKFLMLRIGRTSFTCPSA*PLLSRR
Trigger: GCGGCGGCTCAGCAGCGGCAAGGCCGACGGGCACGT...GAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGGCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAACGTGCCCGTCGGCCTaGCCGCTGCTGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPTCPSA*PLLSRR
Trigger: GCGGCGGCTCAGCAGCGGCAAGGCCGACGGGCACGT...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACCCGAGGAGGAGGATTaGGAGAGAGTACCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGPEEED*ERVPLL
Trigger: GAGCAGCGGTACTCTCTCCAAATCCTCCTCCTCGGG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCTGCTTTCACTCCCGTaGCTCTGGGTGGACTGCACG +
Preference number: 5 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSLLSLP*LWVDCT
Trigger: CGTGCAGTCCACCCAGAGCAACGGGAGTGAAAGCAG...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAATCTGATTGACGGCTaGGGGCAGGAACAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTNLIDG*GQEQGE
Trigger: CTCCCCCTGTTCCTGCCCCAAGCCGTCAATCAGATT...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCCCCAGCCTCCTTGAGTaGAAAGGACTCCCCACACCA +
Preference number: 5 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTPSLLE*KGLPTP
Trigger: TGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGG...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp CACAGTGACTCGGGCATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCAGGTTAATGATCGGCTaGCTCTTATTAGAAGACACG +
Preference number: 5 (lower is better)
Translates to: HSDSGIGYQPRGGQCLIGRLMIG*LLLEDT
Trigger: CGTGTCTTCTAATAAGAGCAAGCCGATCATTAACCT...GCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATGCCCGAGTCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS TCA 90 bp TGGGCTCCTTCAGGGCTCCCTTCAGGTGGATCGTCCGCTCCTGGATaGCTTCGCGGATATGCTTTATCCAGTCCTGCTTGTTCTCTATGC +
Preference number: 5 (lower is better)
Translates to: WAPSGLPSGGSSAPG*LRGYALSSPACSLC
Trigger: GCATAGAGAACAAGCAGGACTGGATAAAGCATATCCGCGAAGTCATCCAGGAGCGGACGATCCACCTGAAGGGAGCCCTGAAGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 90 bp GTGGACTGGCGTCATTGCTGGAGACGGAGAGCGAGTCTTTGTGGTTaGAGATGCCCTCCATTTCCATGCTACTTCTGGAGTGGGCGATGC +
Preference number: 5 (lower is better)
Translates to: VDWRHCWRRRASLCG*RCPPFPCYFWSGRC
Trigger: GCATCGCCCACTCCAGAAGTAGCATGGAAATGGAGGGCATCTTCAACCACAAAGACTCGCTCTCCGTCTCCAGCAATGACGCCAGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 90 bp GTAGGGGTCTGCCACCCATGCCCCACTGATTCCTACCTTTGTGGTTaGAGATGCCCTCCATTTCCATGCTACTTCTGGAGTGGGCGATGC +
Preference number: 5 (lower is better)
Translates to: VGVCHPCPTDSYLCG*RCPPFPCYFWSGRC
Trigger: GCATCGCCCACTCCAGAAGTAGCATGGAAATGGAGGGCATCTTCAACCACAAAGGTAGGAATCAGTGGGGCATGGGTGGCAGACCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509354.1
CDS TCA 90 bp AGACTACCTAAGGTCAGCCACACAGAGCAGTCAGCCATATGCGTCTaGGCCCAAACAGACACTCAACACCAAGGCTCGGGTGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RLPKVSHTEQSAICV*AQTDTQHQGSGELL
Trigger: CAGCAGCTCACCCGAGCCTTGGTGTTGAGTGTCTGTTTGGGCTCAGACGCATATGGCTGACTGCTCTGTGTGGCTGACCTTAGGTAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS GCA 90 bp AATGAGGTGCATATCAGCCTTCGTGAGTGCCTGCTGCTGCCAGGATaGGGACAATGGTTAAGGCACCCTTCACCGAGCACAGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: NEVHISLRECLLLPG*GQWLRHPSPSTGFL
Trigger: CAGAAAGCCTGTGCTCGGTGAAGGGTGCCTTAACCATTGTCCGCATCCTGGCAGCAGCAGGCACTCACGAAGGCTGATATGCACCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS CCA 90 bp GGAACTCCTCGTGCTCTTTCAGGAGCTCCTGGGTGTGCTGTATACTaGAGCCCGTGGAGGTGTGTGTGGAAAGGTAGAACTCGCCATTGT +
Preference number: 5 (lower is better)
Translates to: GTPRALSGAPGCAVY*SPWRCVWKGRTRHC
Trigger: ACAATGGCGAGTTCTACCTTTCCACACACACCTCCACGGGCTCCAGTATACAGCACACCCAGGAGCTCCTGAAAGAGCACGAGGAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS-3UTR CAA 90 bp TCCTTGGTAGACGTTGATCTCATCCTCCTTCACTGCCGTGTAATCGTGTGTCACACCGTGAAGCCACGCTaGCAGACCTCCTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SLVDVDLILLHCRVIVCHTVKPR*QTSSLG
Trigger: TCCCAGCGAGGAGGTCTGCAAGCGTGGCTTCACGGT...GTGACACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TCAGGGCCCTTCCAGGTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTATTCATGGTCAAGGCTTaGTCTGCATGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SGPFQVIEALGRPQTRHLFMVKA*SAWCWR
Trigger: CCTCCAGCACCATGCAGACAAAGCCTTGACCATGAA...TAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTGGAAGGGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTAACATGGACTCTCCGTaGCGGATCCAACCCAGCACC +
Preference number: 5 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSNMDSP*RIQPST
Trigger: GGTGCTGGGTTGGATCCGCAACGGAGAGTCCATGTT...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCGAGGCGTTGACGAGCTaGAGGCGATCTTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPEALTS*RRSSIL
Trigger: CAAGATGGAAGATCGCCTCAAGCTCGTCAACGCCTC...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAGGTCCGTCTCAGAGTTaGGGCCCAGCTTATCCGCCC +
Preference number: 5 (lower is better)
Translates to: SLKCTLQTASGQAPWICRGPSQS*GPAYPP
Trigger: GGGCGGATAAGCTGGGCCCAAACTCTGAGACGGACC...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGTGCTGGAGGCTCCTTTTACTCGATTTGTaGGAATCTGAAGAAATCCCC +
Preference number: 5 (lower is better)
Translates to: VGVSKVSRRPTSRGCWRLLLLDL*ESEEIP
Trigger: GGGGATTTCTTCAGATTCCAACAAATCGAGTAAAAG...GAGCCTCCAGCACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGATCCAGCACCTTCATCTaGGGGATCGGCTCCGCTTCT +
Preference number: 5 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGSSTFI*GIGSAS
Trigger: AGAAGCGGAGCCGATCCCCAAGATGAAGGTGCTGGA...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GTGCTGGAGGCTCTGCAGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATTTGAACGACCTCTCCTaGGTAGACGTTGATCTCATC +
Preference number: 5 (lower is better)
Translates to: VLEALQDAKLMGDLVALHLNDLS*VDVDLI
Trigger: GATGAGATCAACGTCTACCAAGGAGAGGTCGTTCAA...ATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCTGCAGAGCCTCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACCCAGCCTCCTTGAGTaGAAAGGACTCCCCACACCA +
Preference number: 5 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGPSLLE*KGLPTP
Trigger: TGGTGTGGGGAGTCCTTTCAACTCAAGGAGGCTGGG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS TCA 90 bp ACTCCACTGGGAGAGCATGGCTGGCAGCTTGAACCAGGCACTCCCTaGGACCTGCCCTATGCAGTTCTTCCCTTGCCTATTTTGATCTGT +
Preference number: 5 (lower is better)
Translates to: TPLGEHGWQLEPGTP*DLPYAVLPLPILIC
Trigger: ACAGATCAAAATAGGCAAGGGAAGAACTGCATAGGGCAGGTCTCAGGGAGTGCCTGGTTCAAGCTGCCAGCCATGCTCTCCCAGTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS GCA 90 bp CCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTaGTACTGCTGCTGCTTTCACTCCCGTTGCTCTGGGTGGACTGCA +
Preference number: 5 (lower is better)
Translates to: PSLPCNRVSPTWWRC*YCCCFHSRCSGWTA
Trigger: TGCAGTCCACCCAGAGCAACGGGAGTGAAAGCAGCAGCAGTAGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000513206.5
CDS GCA 90 bp TGGCACATCTTCAGACAGACTGGAGCTGACCACATTTGCAGTGACTaGAGGCAGGGTATGTGCAGTGAGGTTTGCCCCCAGCTTCTAGGA +
Preference number: 5 (lower is better)
Translates to: WHIFRQTGADHICSD*RQGMCSEVCPQLLG
Trigger: TCCTAGAAGCTGGGGGCAAACCTCACTGCACATACCCTGCCTGCAGTCACTGCAAATGTGGTCAGCTCCAGTCTGTCTGAAGATGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CCA 90 bp GGAGCTCCTGGGTGTGCTGTATACTGGAGCCCGTGGAGGTGTGTGTaGAAAGGTAGAACTCGCCATTGTCATGGATCCATTCCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: GAPGCAVYWSPWRCV*KGRTRHCHGSIPKP
Trigger: AGGCTTTGGAATGGATCCATGACAATGGCGAGTTCTACCTTTCCACACACACCTCCACGGGCTCCAGTATACAGCACACCCAGGAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 90 bp TCATCCACCAGGATATTCTCAGGATTTCTAAGACCAGGATGTAGCTaGTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAAGCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: SSTRIFSGFLRPGCS*WGSQRCRGGRQAGG
Trigger: ACCCCCTGCTTGTCGGCCTCCTCGACACCTTTGAGACCCCCACCAGCTACATCCTGGTCTTAGAAATCCTGAGAATATCCTGGTGGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508717.1
CDS-3UTR CAA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGAGCCTGAGTTCTTTTaGGGAAAGCTTTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQEPEFF*GKLSLL
Trigger: GAGCAGTGAAAGCTTTCCCAAAAAGAACTCAGGCTC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAGACTCCACCAGACGATaGGCCACCGACATGATGCGG +
Preference number: 5 (lower is better)
Translates to: SLKCTLQTASGQAPWICRDSTRR*ATDMMR
Trigger: CCGCATCATGTCGGTGGCCAATCGTCTGGTGGAGTC...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAAAGGGCCGCTGGAGCTaGTCAAGGAGCGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: SLKCTLQTASGQAPWICRKGRWS*SRSDFP
Trigger: TGGGAAGTCGCTCCTTGACAAGCTCCAGCGGCCCTT...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGCCTTCCTTGATCACGTaGACAGTCACCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGPSLIT*TVTCRV
Trigger: CACCCTGCAGGTGACTGTCAACGTGATCAAGGAAGG...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGTTCATGGTCAAGGCTTaGTCTGCATGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RLNARFRSHVGREMHTDEFMVKA*SAWCWR
Trigger: CCTCCAGCACCATGCAGACAAAGCCTTGACCATGAA...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp CGCACCACGCAGTCCAGGAGGCGACCCTGGTCAGCCATTTCTAAGACCAGGATGTTCGAATTAAGGTTTTaGGGTCCCACACTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: RTTQSRRRPWSAISKTRMFELRF*GPTLGR
Trigger: CCTTCCAAGTGTGGGACCCAAAAACCTTAATTCGAA...CATCCTGGTCTTAGAAATGGCTGACCAGGGTCGCCTCCTGGACTGCGTGGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATTTATCCAGTCCTGCTaGTTCTCTATGCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQFIQSC*FSMLEA
Trigger: GGCTTCCAGCATAGAGAACAAGCAGGACTGGATAAA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCACGGAGAGCGAGTCTTaGTGGTTGAAGATGCCCTCC +
Preference number: 5 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSTESES*WLKMPS
Trigger: GGAGGGCATCTTCAACCACAAAGACTCGCTCTCCGT...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGGGCTGGTGAGCCACTaGCGCAGGGTGTTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSGLVSH*RRVLPG
Trigger: GCCGGGCAACACCCTGCGCAAGTGGCTCACCAGCCC...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GTAATTGAGGCTTTGGGGCGGCCACAGACTCGACATCTAAGAACAACGGTCTCCAACCGAGAAGAGGCCTaGTCATCCTGTGAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: VIEALGRPQTRHLRTTVSNREEA*SSCESG
Trigger: GCCAGACTCACAGGATGACAAGGCCTCTTCTCGGTT...GGAGACCGTTGTTCTTAGATGTCGAGTCTGTGGCCGCCCCAAAGCCTCAATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCACGTTCATCATGTCGTaGCACCGCCTGGGTACTATG +
Preference number: 5 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTTFIMS*HRLGTM
Trigger: CATAGTACCCAGGCGGTGCAACGACATGATGAACGT...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCTGTGCTATCCTGCAGTaGTGCAGGTACCGGACAGCT +
Preference number: 5 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSCAILQ*CRYRTA
Trigger: AGCTGTCCGGTACCTGCACAACTGCAGGATAGCACA...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAAGTTTGATGGTTGGCTaGGCTAAACTCTCATCCACC +
Preference number: 5 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQSLMVG*AKLSST
Trigger: GGTGGATGAGAGTTTAGCCAAGCCAACCATCAAACT...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCACCCGTGCTTCTGCCGTaGCCGGCCTGCAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSPVLLP*PACSHC
Trigger: GCAGTGGCTGCAGGCCGGCAACGGCAGAAGCACGGG...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS GCA 90 bp CCAGCATGGTGGACACCTTGGGCAAGAGGTTCTGCAGGTCCGCATTaGCTGAGCCTGAGTTCTTTTTGGGAAAGCTTTCACTGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: PAWWTPWARGSAGPH*LSLSSFWESFHCSV
Trigger: TACAGAGCAGTGAAAGCTTTCCCAAAAAGAACTCAGGCTCAGGCAATGCGGACCTGCAGAACCTCTTGCCCAAGGTGTCCACCATGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000504606.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
CDS GCA 90 bp TGGCATGTTCACGCTGTTCCTGTGCAGGTATTTCAGGAAGACGTCTaGATTCCTCCGAGCAAGGGTGCAAGCCTTCAGGAATGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: WHVHAVPVQVFQEDV*IPPSKGASLQECLL
Trigger: AAGGAGGCATTCCTGAAGGCTTGCACCCTTGCTCGGAGGAATGCAGACGTCTTCCTGAAATACCTGCACAGGAACAGCGTGAACATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 90 bp GCTTTGATGTGCGTCACCATTCCTGGCATGTTCACGCTGTTCCTGTaGAGGTATTTCAGGAAGACGTCTGCATTCCTCCGAGCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: ALMCVTIPGMFTLFL*RYFRKTSAFLRARV
Trigger: CACCCTTGCTCGGAGGAATGCAGACGTCTTCCTGAAATACCTGCACAGGAACAGCGTGAACATGCCAGGAATGGTGACGCACATCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 90 bp GCTCCCTTCAGGTGGATCGTCCGCTCCTGGATGACTTCGCGGATATaGTTTATCCAGTCCTGCTTGTTCTCTATGCTGGAAGCCTTAAGG +
Preference number: 5 (lower is better)
Translates to: APFRWIVRSWMTSRI*FIQSCLFSMLEALR
Trigger: CCTTAAGGCTTCCAGCATAGAGAACAAGCAGGACTGGATAAAGCATATCCGCGAAGTCATCCAGGAGCGGACGATCCACCTGAAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 90 bp CTGAGCTGGCAGTCACTGGAGAAGCAACTGATTTGTTTAATGAGGTaGATATCAGCCTTCGTGAGTGCCTGCTGCTGCCAGGATGCGGAC +
Preference number: 5 (lower is better)
Translates to: LSWQSLEKQLICLMR*ISAFVSACCCQDAD
Trigger: GTCCGCATCCTGGCAGCAGCAGGCACTCACGAAGGCTGATATGCACCTCATTAAACAAATCAGTTGCTTCTCCAGTGACTGCCAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS-3UTR CAA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGAAGGGCCGCTGGAGCTaGTCAAGGAGCGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVKGRWS*SRSDFP
Trigger: TGGGAAGTCGCTCCTTGACAAGCTCCAGCGGCCCTT...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCCCCACACCTGTATGTTaGCTCAGAAATGCTTCTCCG +
Preference number: 5 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPPTPVC*LRNASP
Trigger: CGGAGAAGCATTTCTGAGCAAACATACAGGTGTGGG...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGCGCCTGGAAGCTCAACGTCAAAAGTCAAGTaGTTCATGGTCAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: FRSHVGREMHTDEAPGSSTSKVK*FMVKAL
Trigger: CAAAGCCTTGACCATGAACAACTTGACTTTTGACGT...TGAGCTTCCAGGCGCCTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GCGCCGCTCAATGAAGGAAGTCAGTCTGGACGTGTCGAGGACGCCCGTGCTTCTACGTCAAAAGTCAAGTaGTTCATGGTCAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: APLNEGSQSGRVEDARASTSKVK*FMVKAL
Trigger: CAAAGCCTTGACCATGAACAACTTGACTTTTGACGT...AGAAGCACGGGCGTCCTCGACACGTCCAGACTGACTTCCTTCATTGAGCGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTGGTCCTGGACCCGAGTaGCCATGTCTACATCTCTAT +
Preference number: 5 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSGPGPE*PCLHLY
Trigger: ATAGAGATGTAGACATGGCAACTCGGGTCCAGGACC...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCGGTCCGTCTCAGAGTTaGGGCCCAGCTTATCCGCCC +
Preference number: 5 (lower is better)
Translates to: HCSLGSFLITFLNDRESAGPSQS*GPAYPP
Trigger: GGGCGGATAAGCTGGGCCCAAACTCTGAGACGGACC...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATTTCTGCTCCAGGTGCTaGCTGATCATGGGCGTCACG +
Preference number: 5 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNFCSRC*LIMGVT
Trigger: CGTGACGCCCATGATCAGCAAGCACCTGGAGCAGAA...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGACACCCCGCCCTGCTGTTCAGGAGCTTaGATGTGCGTCACCATTCCT +
Preference number: 5 (lower is better)
Translates to: GRVSIRTSGLCVGNDTPPCCSGA*MCVTIP
Trigger: AGGAATGGTGACGCACATCAAAGCTCCTGAACAGCA...GGGCGGGGTGTCATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATACCCTGTTCTCCCGTaGGAAGAGTTCATTCAAGAT +
Preference number: 5 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQYPVLP*EEFIQD
Trigger: ATCTTGAATGAACTCTTCCAACGGGAGAACAGGGTA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGAGCGAGTCTTTGTGGTaGAAGATGCCCTCCATTTCC +
Preference number: 5 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLSESLW*KMPSIS
Trigger: GGAAATGGAGGGCATCTTCAACCACAAAGACTCGCT...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCTCCAGGCTGGCCTTTTaGGAATACTTGAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTSRLAF*EYLRKS
Trigger: GGACTTCCTCAAGTATTCCAAAAAGGCCAGCCTGGA...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGATGCGGTCAGTATCCTaGCCAGGGGCCGCGTGGCGG +
Preference number: 5 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQMRSVS*PGAAWR
Trigger: CCGCCACGCGGCCCCTGGCAAGGATACTGACCGCAT...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCGTTGCTGGCCAGAATTaGAACGACCTCTCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTVAGQN*NDLSLV
Trigger: TACCAAGGAGAGGTCGTTCAAATTCTGGCCAGCAAC...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCCAAGATGTTGACTTCTaGAGAGTCCCGTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSQDVDF*RVPSGF
Trigger: GAACCCGGACGGGACTCTCAAGAAGTCAACATCTTG...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGTTCACAGATACCTTGTaGCTGAGTCCTTCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKFTDTL*LSPSRD
Trigger: GTCACGGGAAGGACTCAGCAACAAGGTATCTGTGAA...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTCAGGTAATTGAGGCTTaGGGGCGGCCACAGACTCGA +
Preference number: 5 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSQVIEA*GRPQTR
Trigger: TCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTG...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCCAGGTAATTGAGGCTTaGGGGCGGCCACAGACTCGA +
Preference number: 5 (lower is better)
Translates to: SSLKCTLQTASGQAPWICQVIEA*GRPQTR
Trigger: TCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTG...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAATCGTTGTTCAAGGTGTaGTGTTCAGGGCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKSLFKV*CSGPFQ
Trigger: CTGGAAGGGCCCTGAACACAACACCTTGAACAACGA...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS TCA 90 bp CATCAATGGGCGAGGAGGAAGAGAGAAGGGAATTATCCGAAGGGTTaGAGGAAGGGCTGCTACTATCTCCCTGGTCAACAAGGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: HQWARRKREGNYPKG*RKGCYYLPGQQGVS
Trigger: GCTCACTCCTTGTTGACCAGGGAGATAGTAGCAGCCCTTCCTTCAACCCTTCGGATAATTCCCTTCTCTCTTCCTCCTCGCCCATTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000620511.1
ENST00000639876.2
CDS GCA 90 bp CCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTaGTACTGCTGCTGCTTTCACTCTGACATCTTGTCTGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PSLPCNRVSPTWWRC*YCCCFHSDILSASA
Trigger: GGCAGAGGCAGACAAGATGTCAGAGTGAAAGCAGCAGCAGTAGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGGAGCCTGAGTTCTTTTaGGGAAAGCTTTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: RLNARFRSHVGREMHTDEEPEFF*GKLSLL
Trigger: GAGCAGTGAAAGCTTTCCCAAAAAGAACTCAGGCTC...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAACCCACACCTGTATGTTaGCTCAGAAATGCTTCTCCG +
Preference number: 5 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKPTPVC*LRNASP
Trigger: CGGAGAAGCATTTCTGAGCAAACATACAGGTGTGGG...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCCCTTCCTTGATCACGTaGACAGTCACCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SSLKCTLQTASGQAPWICPSLIT*TVTCRV
Trigger: CACCCTGCAGGTGACTGTCAACGTGATCAAGGAAGG...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCCTTGAGCATGAGCTGTaGCCAGTGAGACGCCACCTT +
Preference number: 5 (lower is better)
Translates to: SSLKCTLQTASGQAPWICLEHEL*PVRRHL
Trigger: AAGGTGGCGTCTCACTGGCAACAGCTCATGCTCAAG...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGTTCTGCTCCAGGTGCTaGCTGATCATGGGCGTCACG +
Preference number: 5 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGFCSRC*LIMGVT
Trigger: CGTGACGCCCATGATCAGCAAGCACCTGGAGCAGAA...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTAGGTGCATGGCATCATaGGCTCGCTTCGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGRCMAS*ARFGTL
Trigger: CAGCGTGCCGAAGCGAGCCAATGATGCCATGCACCT...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATTTTATTATCTGAAGTaGGTGTTCTCCCCACCCACA +
Preference number: 5 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQFYYLK*VFSPPT
Trigger: TGTGGGTGGGGAGAACACCAACTTCAGATAATAAAA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCGAGTCTTTGTGGTaGAAGATGCCCTCCATTTCC +
Preference number: 5 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGSESLW*KMPSIS
Trigger: GGAAATGGAGGGCATCTTCAACCACAAAGACTCGCT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATCGGCTCTTCTTGTGCTaGTGCGCCAGCTTCTTCACG +
Preference number: 5 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNRLFLC*CASFFT
Trigger: CGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCG...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAACCTCGCGGCTCTTCTaGTGCTTGTGCGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKTSRLF*CLCASF
Trigger: GAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGT...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTTCCAGGCTGGCCTTTTaGGAATACTTGAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSSRLAF*EYLRKS
Trigger: GGACTTCCTCAAGTATTCCAAAAAGGCCAGCCTGGA...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACTTCACAGATACCTTGTaGCTGAGTCCTTCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNFTDTL*LSPSRD
Trigger: GTCACGGGAAGGACTCAGCAACAAGGTATCTGTGAA...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACTCGTTGTTCAAGGTGTaGTGTTCAGGGCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDSLFKV*CSGPFQ
Trigger: CTGGAAGGGCCCTGAACACAACACCTTGAACAACGA...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CATTGGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAGTTTGATGGTTGGCTaGGCTAAACTCTCATCCACC +
Preference number: 5 (lower is better)
Translates to: HWVPAAGRPVLNRLLFLTSLMVG*AKLSST
Trigger: GGTGGATGAGAGTTTAGCCAAGCCAACCATCAAACT...GGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGTCACGAAAAGTCTCTTaGAACCGATGGCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGSRKVS*NRWHRA
Trigger: AGCCCTGTGCCATCGGTTCAAAGAGACTTTTCGTGA...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGCCAAAAGACGCTGCGTaGAGAAGGTTAATGATCGGC +
Preference number: 5 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGPKDAA*RRLMIG
Trigger: GCCGATCATTAACCTTCTCAACGCAGCGTCTTTTGG...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR CAA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAATGCTTTGAGTTGCTGTaGGAAGTTTTCTTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQCFELL*EVFLRE
Trigger: TTCCCTCAAGAAAACTTCCAACAGCAACTCAAAGCA...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR CAA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAACCAGTTGTTCCAGTTaGCCCTGCCAAGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: SLKCTLQTASGQAPWICRTSCSS*PCQAQP
Trigger: TGGCTGAGCTTGGCAGGGCAAACTGGAACAACTGGT...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS GCA 90 bp GGTCCGCATTGCCTGAGCCTGAGTTCTTTTTGGGAAAGCTTTCACTaGTCTGTATCCTCTGAAGCAGCTTCTGTCCCTCCAAATCCAGGT +
Preference number: 5 (lower is better)
Translates to: GPHCLSLSSFWESFH*SVSSEAASVPPNPG
Trigger: ACCTGGATTTGGAGGGACAGAAGCTGCTTCAGAGGATACAGAGCAGTGAAAGCTTTCCCAAAAAGAACTCAGGCTCAGGCAATGCGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000504606.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
CDS GCA 90 bp GCAATGCTCTGGCCCGATGAAGAGATTTCCCCACACCTGTATGTTTaGTCAGAAATGCTTCTCCGTGGTTCTCGATCCAGTCTAGCACCT +
Preference number: 5 (lower is better)
Translates to: AMLWPDEEISPHLYV*SEMLLRGSRSSLAP
Trigger: AGGTGCTAGACTGGATCGAGAACCACGGAGAAGCATTTCTGAGCAAACATACAGGTGTGGGGAAATCTCTTCATCGGGCCAGAGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 90 bp GTTAAACCCACTGCAGGTACAGTTACATCTCCACTCAACAATACCTaGCTGTTCACAGACACCCCAGATACTGTTCAGGCCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: VKPTAGTVTSPLNNT*LFTDTPDTVQAWLW
Trigger: CCAGAGCCAGGCCTGAACAGTATCTGGGGTGTCTGTGAACAGGCAGGTATTGTTGAGTGGAGATGTAACTGTACCTGCAGTGGGTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506611.1
CDS GCA 90 bp CCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTACTGCTaGTGCTTTCACTCTGCAGAGGGACAGATGAAGACAGAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: PCNRVSPTWWRCCYC*CFHSAEGQMKTEKG
Trigger: GCCTTTCTCTGTCTTCATCTGTCCCTCTGCAGAGTGAAAGCAGCAGCAGTAGCAACATCTCCACCATGTTGGTGACACACGATTACACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503399.1
CDS GCA 90 bp CCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTaGTACTGCTGCTGCTTTCACTCTGCAGAGGGACAGATGAAGACA +
Preference number: 5 (lower is better)
Translates to: PSLPCNRVSPTWWRC*YCCCFHSAEGQMKT
Trigger: TGTCTTCATCTGTCCCTCTGCAGAGTGAAAGCAGCAGCAGTAGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503399.1
CDS CCA 90 bp CAAAGACCACGTACTGCTGACACTGGTCCAGCCGTCTCTTCCTCATaGTCCAGTAATGCAATACCCTGTTCTCCCGTTGGAAGAGTTCAT +
Preference number: 5 (lower is better)
Translates to: QRPRTADTGPAVSSS*SSNAIPCSPVGRVH
Trigger: ATGAACTCTTCCAACGGGAGAACAGGGTATTGCATTACTGGACCATGAGGAAGAGACGGCTGGACCAGTGTCAGCAGTACGTGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 90 bp GGAAGCCCACCGCTGTTCCAAATGCATGGGCAGCTTCACCAGAAATaGAAGTGGACACCTTTGGCTTTTGGCCAAAGTCTGAAAATCCTC +
Preference number: 5 (lower is better)
Translates to: GSPPLFQMHGQLHQK*KWTPLAFGQSLKIL
Trigger: GAGGATTTTCAGACTTTGGCCAAAAGCCAAAGGTGTCCACTTCCATTTCTGGTGAAGCTGCCCATGCATTTGGAACAGCGGTGGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507714.1
CDS CCA 90 bp CGCGCGCTGCAGTTGGGTTTCACAAGTGGGAATACCCAGACGCGGTaGATTTCATTCTACCACACTGACTCTAATTGGAGCTCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: RALQLGFTSGNTQTR*ISFYHTDSNWSSRK
Trigger: TTTCCTTGAGCTCCAATTAGAGTCAGTGTGGTAGAATGAAATCCACCGCGTCTGGGTATTCCCACTTGTGAAACCCAACTGCAGCGCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS-3UTR CAA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAACCGTGAAGCCACGCTaGCAGACCTCCTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSTVKPR*QTSSLG
Trigger: TCCCAGCGAGGAGGTCTGCAAGCGTGGCTTCACGGT...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAGGTCCTCCCCTTCCTaGATCACGTTGACAGTCACC +
Preference number: 5 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNRSSPS*ITLTVT
Trigger: GGTGACTGTCAACGTGATCAAGGAAGGGGAGGACCT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAAGTCGAAGTCATTCATTaGCTGAGAAAGCTCATCATT +
Preference number: 5 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQVEVIH*LRKLII
Trigger: AATGATGAGCTTTCTCAGCAAATGAATGACTTCGAC...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGACAGAAGATCTTGCCCTaGGTGGATGACGTCAAAAGT +
Preference number: 5 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGQKILP*VDDVKS
Trigger: ACTTTTGACGTCATCCACCAAGGGCAAGATCTTCTG...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAAACATGGACTCTCCGTaGCGGATCCAACCCAGCACC +
Preference number: 5 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKNMDSP*RIQPST
Trigger: GGTGCTGGGTTGGATCCGCAACGGAGAGTCCATGTT...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACAAACTTAGTGAAAGCGACAGAGGCGTaGACGAGCTTGAGGCGATCT +
Preference number: 5 (lower is better)
Translates to: SSWVTWSRFINFLFTNLVKATEA*TSLRRS
Trigger: AGATCGCCTCAAGCTCGTCAACGCCTCTGTCGCTTT...CACTAAGTTTGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGTACCCTGTTCTCCCGTaGGAAGAGTTCATTCAAGAT +
Preference number: 5 (lower is better)
Translates to: VHTSNSIRPSTVDLQTDLYPVLP*EEFIQD
Trigger: ATCTTGAATGAACTCTTCCAACGGGAGAACAGGGTA...CAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CAGAGTGTAAGTGACGGTCCTCCACCCCAGCGCAGCTTGCAGCTCTGTGTCCAACTTTTACTCGATTTGTaGGAATCTGAAGAAATCCCC +
Preference number: 5 (lower is better)
Translates to: QSVSDGPPPQRSLQLCVQLLLDL*ESEEIP
Trigger: GGGGATTTCTTCAGATTCCAACAAATCGAGTAAAAG...TTGGACACAGAGCTGCAAGCTGCGCTGGGGTGGAGGACCGTCACTTACACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGTTCGAATTAAGGTTTTaGGGTCCCACACTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKFELRF*GPTLGR
Trigger: CCTTCCAAGTGTGGGACCCAAAAACCTTAATTCGAA...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp TCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGACCTGGCAATGTCTTTTATCCAGTCCTGCTaGTTCTCTATGCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: SNSIRPSTVDLQTDLAMSFIQSC*FSMLEA
Trigger: GGCTTCCAGCATAGAGAACAAGCAGGACTGGATAAA...AGACATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCTGGGGAGCGGTCAGTaGTCCGCACCAGACACCAGT +
Preference number: 5 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHLGSGQ*SAPDTS
Trigger: ACTGGTGTCTGGTGCGGACAACTGACCGCTCCCCAG...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATAACCGAGAAGAGGCCTaGTCATCCTGTGAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADNREEA*SSCESG
Trigger: GCCAGACTCACAGGATGACAAGGCCTCTTCTCGGTT...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGTTTCCCGTCGAATCCTaGCAGCCGCCCCACGTTCAT +
Preference number: 5 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLFPVES*QPPHVH
Trigger: ATGAACGTGGGGCGGCTGCAAGGATTCGACGGGAAA...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGCAGAAGTCCTGCATCTaGGTCTGTGACCAAGAATGT +
Preference number: 5 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGQKSCI*VCDQEC
Trigger: ACATTCTTGGTCACAGACCAAGATGCAGGACTTCTG...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATCAAGATGTTGACTTCTaGAGAGTCCCGTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNQDVDF*RVPSGF
Trigger: GAACCCGGACGGGACTCTCAAGAAGTCAACATCTTG...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATAAGCACACGAACTCCTaGGCCTTCTGGCTCACTCCT +
Preference number: 5 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADKHTNS*AFWLTP
Trigger: AGGAGTGAGCCAGAAGGCCAAGGAGTTCGTGTGCTT...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACCACCACAGCAACCCTaGTGCTTGAGACGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKPPQQP*CLRRQH
Trigger: ATGCTGCCGTCTCAAGCACAAGGGTTGCTGTGGTGG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR CAA 90 bp TCCTTGGTAGACGTTGATCTCATCCTCCTTCACTGCCGTGTAATCGTGTGTCACTTTCACTCTGACATCTaGTCTGCCTCTGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SLVDVDLILLHCRVIVCHFHSDI*SASAWL
Trigger: GAGCCAGGCAGAGGCAGACAAGATGTCAGAGTGAAA...GTGACACACGATTACACGGCAGTGAAGGAGGATGAGATCAACGTCTACCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS GCA 90 bp TGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTACTGCTGCTaGTTTCACTCTGCAGAGGGACAGATGAAGACAGAGAAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: CNRVSPTWWRCCYCC*FHSAEGQMKTEKGR
Trigger: CCTGCCTTTCTCTGTCTTCATCTGTCCCTCTGCAGAGTGAAAGCAGCAGCAGTAGCAACATCTCCACCATGTTGGTGACACACGATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503399.1
CDS GCA 90 bp CTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTACTaGTGCTGCTTTCACTCTGCAGAGGGACAGATGAAGACAGAGAAA +
Preference number: 5 (lower is better)
Translates to: LPCNRVSPTWWRCCY*CCFHSAEGQMKTEK
Trigger: TTTCTCTGTCTTCATCTGTCCCTCTGCAGAGTGAAAGCAGCAGCAGTAGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503399.1
CDS GCA 90 bp GAAGCAACTGATTTGTTTAATGAGGTGCATATCAGCCTTCGTGAGTaGCTGCTGCTGCCAGGATGCGGACAATGGTTAAGGCACCCTTCA +
Preference number: 5 (lower is better)
Translates to: EATDLFNEVHISLRE*LLLPGCGQWLRHPS
Trigger: TGAAGGGTGCCTTAACCATTGTCCGCATCCTGGCAGCAGCAGGCACTCACGAAGGCTGATATGCACCTCATTAAACAAATCAGTTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS CCA 90 bp CCACCGCTGTTCCAAATGCATGGGCAGCTTCACCAGAAATGGAAGTaGACACCTTTGGCTTTTGGCCAAAGTCTGAAAATCCTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: PPLFQMHGQLHQKWK*TPLAFGQSLKILCL
Trigger: AAGGCAGAGGATTTTCAGACTTTGGCCAAAAGCCAAAGGTGTCCACTTCCATTTCTGGTGAAGCTGCCCATGCATTTGGAACAGCGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507714.1
CDS-3UTR CAA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGACCGTGAAGCCACGCTaGCAGACCTCCTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWETVKPR*QTSSLG
Trigger: TCCCAGCGAGGAGGTCTGCAAGCGTGGCTTCACGGT...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACCACCATGAATCCACGTaGCTCATATACTTTTCGGCC +
Preference number: 5 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDHHEST*LIYFSA
Trigger: GGCCGAAAAGTATATGAGCAACGTGGATTCATGGTG...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAACCTTCCTTGATCACGTaGACAGTCACCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKPSLIT*TVTCRV
Trigger: CACCCTGCAGGTGACTGTCAACGTGATCAAGGAAGG...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AGGATGCCAAGCTCATGGGTGACCTGGTCGCGCTTCATCAACTTCTTGTTCACACAGAAGATCTTGCCCTaGGTGGATGACGTCAAAAGT +
Preference number: 5 (lower is better)
Translates to: RMPSSWVTWSRFINFLFTQKILP*VDDVKS
Trigger: ACTTTTGACGTCATCCACCAAGGGCAAGATCTTCTG...TGTGAACAAGAAGTTGATGAAGCGCGACCAGGTCACCCATGAGCTTGGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATATACTGCAGAAGATCTaGCCCTTGGTGGATGACGTC +
Preference number: 5 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNILQKI*PLVDDV
Trigger: GACGTCATCCACCAAGGGCAAGATCTTCTGCAGTAT...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTGAGGCCTGGACCTCATaGACATACTGCAGAAGATCT +
Preference number: 5 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGEAWTS*TYCRRS
Trigger: AGATCTTCTGCAGTATGTCAATGAGGTCCAGGCCTC...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACTTGAGCATGAGCTGTaGCCAGTGAGACGCCACCTT +
Preference number: 5 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKLEHEL*PVRRHL
Trigger: AAGGTGGCGTCTCACTGGCAACAGCTCATGCTCAAG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp GTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAACTACCCTGTTCTCCCGTaGGAAGAGTTCATTCAAGAT +
Preference number: 5 (lower is better)
Translates to: VIQEGGHATKKYVCEHSNYPVLP*EEFIQD
Trigger: ATCTTGAATGAACTCTTCCAACGGGAGAACAGGGTA...GTTGGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGAGCTTCACTCTCTCTTaGGTTTGCTTTGCAGTTATC +
Preference number: 5 (lower is better)
Translates to: RLNARFRSHVGREMHTDESFTLS*VCFAVI
Trigger: GATAACTGCAAAGCAAACCAAAGAGAGAGTGAAGCT...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGAGGTGCATGGCATCATaGGCTCGCTTCGGCACGCTG +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSRCMAS*ARFGTL
Trigger: CAGCGTGCCGAAGCGAGCCAATGATGCCATGCACCT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGAGACACCAGTCAGGCTaGTCATGCGGCCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSRHQSG*SCGRSR
Trigger: TCTGGAGCGGCCGCATGACAAGCCTGACTGGTGTCT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAACCTCGCGGCTCTTCTaGTGCTTGTGCGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPTSRLF*CLCASF
Trigger: GAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGT...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACCCGAGGAGGAGGATTaGGAGAGAGTACCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPPEEED*ERVPLL
Trigger: GAGCAGCGGTACTCTCTCCAAATCCTCCTCCTCGGG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAATTCTCTGCACTGGTTaGATCAACAGATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGILCTG*INRSVS
Trigger: GCTCACAGATCTGTTGATCAAACCAGTGCAGAGAAT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp ATCCTCCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTGTTGCTGGCCAGAATTaGAACGACCTCTCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: ILLHCRVIVCHQHGGDVAVAGQN*NDLSLV
Trigger: TACCAAGGAGAGGTCGTTCAAATTCTGGCCAGCAAC...AGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTTTCACAGATACCTTGTaGCTGAGTCCTTCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGFTDTL*LSPSRD
Trigger: GTCACGGGAAGGACTCAGCAACAAGGTATCTGTGAA...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTAGCTTCACAGATACCTaGTTGCTGAGTCCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGSFTDT*LLSPSR
Trigger: ACGGGAAGGACTCAGCAACAAGGTATCTGTGAAGCT...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGCAGGTAATTGAGGCTTaGGGGCGGCCACAGACTCGA +
Preference number: 5 (lower is better)
Translates to: PALQKVFNATDRSNIILVQVIEA*GRPQTR
Trigger: TCGAGTCTGTGGCCGCCCCAAAGCCTCAATTACCTG...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTCGTTGTTCAAGGTGTaGTGTTCAGGGCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADSLFKV*CSGPFQ
Trigger: CTGGAAGGGCCCTGAACACAACACCTTGAACAACGA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344135.5
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGTGTGCTATCCTGCAGTaGTGCAGGTACCGGACAGCT +
Preference number: 5 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLCAILQ*CRYRTA
Trigger: AGCTGTCCGGTACCTGCACAACTGCAGGATAGCACA...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCATAAGGACTAGCGGCTaGTGTGTGGGAAATGACACC +
Preference number: 5 (lower is better)
Translates to: SSLKCTLQTASGQAPWICIRTSG*CVGNDT
Trigger: GGTGTCATTTCCCACACACAAGCCGCTAGTCCTTAT...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS TCA 90 bp GCGAGGCATAGTGGCCAGACTCCACCAGACGATTGGCCACCGACATaGTGCGGTTTATATTTACATACACGTTCATACAGTTCATGGCAA +
Preference number: 5 (lower is better)
Translates to: ARHSGQTPPDDWPPT*CGLYLHTRSYSSWQ
Trigger: TTGCCATGAACTGTATGAACGTGTATGTAAATATAAACCGCATCATGTCGGTGGCCAATCGTCTGGTGGAGTCTGGCCACTATGCCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000504606.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 90 bp CAGGGCCAAGTGACTTCAGAGCTCACATGCGGAGCTCACAGTATGTaGTACACAAGAGTGTTTGCACACACACCAATATTCATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: QGQVTSELTCGAHSM*YTRVFAHTPIFMEE
Trigger: TTCCTCCATGAATATTGGTGTGTGTGCAAACACTCTTGTGTAGCACATACTGTGAGCTCCGCATGTGAGCTCTGAAGTCACTTGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504606.1
CDS GCA 90 bp GGTGCCGAGAGGTCACTCTCCTGTGACATCCCAGACACTCTGGTCTaGTACTTACAACTGTCTTTTGAAGCCCCACAAATGACTTATTGT +
Preference number: 5 (lower is better)
Translates to: GAERSLSCDIPDTLV*YLQLSFEAPQMTYC
Trigger: ACAATAAGTCATTTGTGGGGCTTCAAAAGACAGTTGTAAGTAGCAGACCAGAGTGTCTGGGATGTCACAGGAGAGTGACCTCTCGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508343.1
CDS GCA 90 bp CCCAGTTTACAGGTTAGTAGGGTGACCAGTTGTTCCAGTTTGCCCTaGCAAGCTCAGCCACTTCACTGTAGAAGGAGTCAAAGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: PSLQVSRVTSCSSLP*QAQPLHCRRSQSCL
Trigger: AAGACAACTTTGACTCCTTCTACAGTGAAGTGGCTGAGCTTGGCAGGGCAAACTGGAACAACTGGTCACCCTACTAACCTGTAAACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS GCA 90 bp GCGTTCAAACATACACTCATTAGAACAGTTCTATTCACTCACGCATaGCTTCAGGAAAGTGTTACGGGCCAGGCCATCTGCCCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: AFKHTLIRTVLFTHA*LQESVTGQAICPVG
Trigger: TCCTACAGGGCAGATGGCCTGGCCCGTAACACTTTCCTGAAGGCATGCGTGAGTGAATAGAACTGTTCTAATGAGTGTATGTTTGAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515144.5
CDS CCA 90 bp CTGCAAGTAGCAACACAGAGCAGCTTCCAAAAGTCAGACTTTCTCTaGGAGGCCTCACCATCTTGCTTTTCACGAGTTCCTCAATTGCAC +
Preference number: 5 (lower is better)
Translates to: LQVATQSSFQKSDFL*EASPSCFSRVPQLH
Trigger: GTGCAATTGAGGAACTCGTGAAAAGCAAGATGGTGAGGCCTCCCAGAGAAAGTCTGACTTTTGGAAGCTGCTCTGTGTTGCTACTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS-3UTR CAA 90 bp TTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGCGAAGGATCAACTACTTaGGTAAGGCCTTCTAAAGAG +
Preference number: 5 (lower is better)
Translates to: LTTPVYGSRPRCLAGLGSEGSTT*VRPSKE
Trigger: CTCTTTAGAAGGCCTTACCAAAGTAGTTGATCCTTC...GCTTCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGAGAGCCTGAGTTCTTTTaGGGAAAGCTTTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: SLKCTLQTASGQAPWICREPEFF*GKLSLL
Trigger: GAGCAGTGAAAGCTTTCCCAAAAAGAACTCAGGCTC...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAATTTAGAAACAGGCCTTaGTTGTGTGTGATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKFRNRP*LCVIQS
Trigger: TGACTGGATCACACACAACAAAGGCCTGTTTCTAAA...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACGACTCCACCAGACGATaGGCCACCGACATGATGCGG +
Preference number: 5 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNDSTRR*ATDMMR
Trigger: CCGCATCATGTCGGTGGCCAATCGTCTGGTGGAGTC...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAGAGCGACTTCCCATCTaGGCTGACCTCAGAATAAGC +
Preference number: 5 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKERLPI*ADLRIS
Trigger: GCTTATTCTGAGGTCAGCCAAGATGGGAAGTCGCTC...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGAAGTAATTTATCCGCATaGGTGTATGTGTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SLTTPVYGSRPRCLAGLGSNLSA*VYVFCA
Trigger: GGCACAGAACACATACACCAATGCGGATAAATTACT...TCCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCAGTAATTTATCCGCATaGGTGTATGTGTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSSNLSA*VYVFCA
Trigger: GGCACAGAACACATACACCAATGCGGATAAATTACT...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGATACTGCAGAAGATCTaGCCCTTGGTGGATGACGTC +
Preference number: 5 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGILQKI*PLVDDV
Trigger: GACGTCATCCACCAAGGGCAAGATCTTCTGCAGTAT...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp CATCAACTTCTTGTTCACAAACTTAGTGGCCACTGCTCGCTTGGTTCCTTTCTGGGTCCTGGACCCGAGTaGCCATGTCTACATCTCTAT +
Preference number: 5 (lower is better)
Translates to: HQLLVHKLSGHCSLGSFLGPGPE*PCLHLY
Trigger: ATAGAGATGTAGACATGGCAACTCGGGTCCAGGACC...CAGAAAGGAACCAAGCGAGCAGTGGCCACTAAGTTTGTGAACAAGAAGTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATTCTGCTCCAGGTGCTaGCTGATCATGGGCGTCACG +
Preference number: 5 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIFCSRC*LIMGVT
Trigger: CGTGACGCCCATGATCAGCAAGCACCTGGAGCAGAA...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATTGCTGTTCAGGAGCTTaGATGTGCGTCACCATTCCT +
Preference number: 5 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADCCSGA*MCVTIP
Trigger: AGGAATGGTGACGCACATCAAAGCTCCTGAACAGCA...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp GGCTGGCTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGAAGATGATGAGTTCTTaGTTTACAATGCCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: GWLGKRAGLFCSAVHTRKKMMSS*FTMPGG
Trigger: TCCACCTGGCATTGTAAACAAAGAACTCATCATCTT...CTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAGCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp ACTGTCATCCAGGAAGGGGGACACGCCACTAAGAAGTACGTATGTGAGCACTCCTTTTATTATCTGAAGTaGGTGTTCTCCCCACCCACA +
Preference number: 5 (lower is better)
Translates to: TVIQEGGHATKKYVCEHSFYYLK*VFSPPT
Trigger: TGTGGGTGGGGAGAACACCAACTTCAGATAATAAAA...GGAGTGCTCACATACGTACTTCTTAGTGGCGTGTCCCCCTTCCTGGATGACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCGGATGGTCAGCTCGTaGCTGTTGCAAGCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RPKAGTVLYTSKAYISSERMVSS*LLQAVK
Trigger: CTTCACCGCTTGCAACAGCAACGAGCTGACCATCCG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACGGATGGTCAGCTCGTaGCTGTTGCAAGCGGTGAAG +
Preference number: 5 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPRMVSS*LLQAVK
Trigger: CTTCACCGCTTGCAACAGCAACGAGCTGACCATCCG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCTGCCTCCTCCAGTGCCATCTaGCTTTTCACGAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: SLGSFLITFLNDRESAPASSSAI*LFTSSS
Trigger: TGAGGAACTCGTGAAAAGCAAGATGGCACTGGAGGA...GGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGGCCTTTTTGGAATACTaGAGGAAGTCCTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGAFLEY*RKSFSN
Trigger: GTTACTGAAGGACTTCCTCAAGTATTCCAAAAAGGC...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATTTTCCCGTCGAATCCTaGCAGCCGCCCCACGTTCAT +
Preference number: 5 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHFPVES*QPPHVH
Trigger: ATGAACGTGGGGCGGCTGCAAGGATTCGACGGGAAA...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCAGACAGAAGTCCTGCATCTaGGTCTGTGACCAAGAATGT +
Preference number: 5 (lower is better)
Translates to: SLKCTLQTASGQAPWICRQKSCI*VCDQEC
Trigger: ACATTCTTGGTCACAGACCAAGATGCAGGACTTCTG...TCTGCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AATACTGTGATACAGCAATGCGACCTCTGCCTTGGGCAGAGTGTAAGTGACGGTTTCATGGATCCAAGTTaGCCGGACACTTGGACTAGA +
Preference number: 5 (lower is better)
Translates to: NTVIQQCDLCLGQSVSDGFMDPS*PDTWTR
Trigger: TCTAGTCCAAGTGTCCGGCAAACTTGGATCCATGAA...ACCGTCACTTACACTCTGCCCAAGGCAGAGGTCGCATTGCTGTATCACAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGGACGTACCTGACATCTaGTCTGCCTCTGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSDVPDI*SASAWL
Trigger: GAGCCAGGCAGAGGCAGACAAGATGTCAGGTACGTC...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCCAGCACCTTCATCTaGGGGATCGGCTCCGCTTCT +
Preference number: 5 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPSSTFI*GIGSAS
Trigger: AGAAGCGGAGCCGATCCCCAAGATGAAGGTGCTGGA...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTTGAACGACCTCTCCTaGGTAGACGTTGATCTCATC +
Preference number: 5 (lower is better)
Translates to: SSLKCTLQTASGQAPWICLNDLS*VDVDLI
Trigger: GATGAGATCAACGTCTACCAAGGAGAGGTCGTTCAA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTGGCTGGCTTGGGTGCAAAAGTTTGAGGTaGAATGCACGTTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: KLNYASLWLKTQVSGWLGCKSLR*NARFRS
Trigger: GCTTCTGAAACGTGCATTCAACCTCAAACTTTTGCA...CCCAAGCCAGCCAGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS TCA 90 bp ATTCTGCACAAATGCCAGTTATTCCCAGTTTACAGGTTAGTAGGGTaGCCAGTTGTTCCAGTTTGCCCTGCCAAGCTCAGCCACTTCACT +
Preference number: 5 (lower is better)
Translates to: ILHKCQLFPVYRLVG*PVVPVCPAKLSHFT
Trigger: AGTGAAGTGGCTGAGCTTGGCAGGGCAAACTGGAACAACTGGTCACCCTACTAACCTGTAAACTGGGAATAACTGGCATTTGTGCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS CCA 90 bp ATTTTTCACTTGCTGTTCAGGAGCTTTGATGTGCGTCACCATTCCTaGCATGTTCACGCTGTTCCTGTGCAGGTATTTCAGGAAGACGTC +
Preference number: 5 (lower is better)
Translates to: IFHLLFRSFDVRHHS*HVHAVPVQVFQEDV
Trigger: GACGTCTTCCTGAAATACCTGCACAGGAACAGCGTGAACATGCCAGGAATGGTGACGCACATCAAAGCTCCTGAACAGCAAGTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS-3UTR CAA 90 bp AAGAAGTACGTATGTGAGCACTCCAACACTCCACGTATCCGAGGTCAGGGAGACGAAGGATCAACTACTTaGGTAAGGCCTTCTAAAGAG +
Preference number: 5 (lower is better)
Translates to: KKYVCEHSNTPRIRGQGDEGSTT*VRPSKE
Trigger: CTCTTTAGAAGGCCTTACCAAAGTAGTTGATCCTTC...GTCTCCCTGACCTCGGATACGTGGAGTGTTGGAGTGCTCACATACGTACTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGGAAGAGCTCCAGCTaGATCTTGCGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQRKSSS*ILRSWK
Trigger: CTTCCAGGAGCGCAAGATCAAGCTGGAGCTCTTCCT...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAGGAAGAGCTCCAGCTaGATCTTGCGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSRKSSS*ILRSWK
Trigger: CTTCCAGGAGCGCAAGATCAAGCTGGAGCTCTTCCT...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATCAGAAGATCTTGCCCTaGGTGGATGACGTCAAAAGT +
Preference number: 5 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNQKILP*VDDVKS
Trigger: ACTTTTGACGTCATCCACCAAGGGCAAGATCTTCTG...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGAAAGCGACAGAGGCGTaGACGAGCTTGAGGCGATCT +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSKATEA*TSLRRS
Trigger: AGATCGCCTCAAGCTCGTCAACGCCTCTGTCGCTTT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGGTCCGTCTCAGAGTTaGGGCCCAGCTTATCCGCCC +
Preference number: 5 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTGPSQS*GPAYPP
Trigger: GGGCGGATAAGCTGGGCCCAAACTCTGAGACGGACC...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAATGCTGTTCAGGAGCTTaGATGTGCGTCACCATTCCT +
Preference number: 5 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKCCSGA*MCVTIP
Trigger: AGGAATGGTGACGCACATCAAAGCTCCTGAACAGCA...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp TCTTCTCTAAAGTGCACACTTCAAACAGCATCCGGCCAAGCACCGTGGATTTGCTTCGAATTAAGGTTTTaGGGTCCCACACTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SSLKCTLQTASGQAPWICFELRF*GPTLGR
Trigger: CCTTCCAAGTGTGGGACCCAAAAACCTTAATTCGAA...GCAAATCCACGGTGCTTGGCCGGATGCTGTTTGAAGTGTGCACTTTAGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GAGCACAGCTCACTTGGAATGCAATTTCACACGATGAACATACCGGCAGCTGATACCCACAGTGCAAATTaGCAAGGGTCTCCTTCAACA +
Preference number: 5 (lower is better)
Translates to: EHSSLGMQFHTMNIPAADTHSAN*QGSPST
Trigger: TGTTGAAGGAGACCCTTGCAAATTTGCACTGTGGGT...ATCAGCTGCCGGTATGTTCATCGTGTGAAATTGCATTCCAAGTGAGCTGTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000512070.6
CDS-3UTR CAA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGGTCAGCTCGTTGCTGTaGCAAGCGGTGAAGTCATGG +
Preference number: 5 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEVSSLL*QAVKSW
Trigger: CCATGACTTCACCGCTTGCAACAGCAACGAGCTGAC...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAGTCAGCTCGTTGCTGTaGCAAGCGGTGAAGTCATGG +
Preference number: 5 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIVSSLL*QAVKSW
Trigger: CCATGACTTCACCGCTTGCAACAGCAACGAGCTGAC...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGACGGAGAGCGAGTCTTaGTGGTTGAAGATGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RPKAGTVLYTSKAYISSETESES*WLKMPS
Trigger: GGAGGGCATCTTCAACCACAAAGACTCGCTCTCCGT...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATACGGAGAGCGAGTCTTaGTGGTTGAAGATGCCCTCC +
Preference number: 5 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHTESES*WLKMPS
Trigger: GGAGGGCATCTTCAACCACAAAGACTCGCTCTCCGT...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATAACCGAGAAGAGGCCTaGTCATCCTGTGAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHNREEA*SSCESG
Trigger: GCCAGACTCACAGGATGACAAGGCCTCTTCTCGGTT...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAATCCTCCAGTGCCATCTaGCTTTTCACGAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKSSSAI*LFTSSS
Trigger: TGAGGAACTCGTGAAAAGCAAGATGGCACTGGAGGA...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp ATCCTCCTTCACTGCCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTGCTATTCTCTGCACTGGTTaGATCAACAGATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: ILLHCRVIVCHQHGGDVAILCTG*INRSVS
Trigger: GCTCACAGATCTGTTGATCAAACCAGTGCAGAGAAT...AGCAACATCTCCACCATGTTGGTGACACACGATTACACGGCAGTGAAGGAGGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATTCCTCTGGTACTCGATaGGCGATGTCAAGGCATTTA +
Preference number: 5 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNSSGTR*AMSRHL
Trigger: TAAATGCCTTGACATCGCCAATCGAGTACCAGAGGA...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTGTGCTATCCTGCAGTaGTGCAGGTACCGGACAGCT +
Preference number: 5 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQCAILQ*CRYRTA
Trigger: AGCTGTCCGGTACCTGCACAACTGCAGGATAGCACA...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp AGGTTGAATGCACGTTTCAGAAGCCACGTCGGGCGTGAGATGCACACAGACGAGTTAGTTTGCTTTGAGTaGCTGTTGGAAGTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: RLNARFRSHVGREMHTDELVCFE*LLEVFL
Trigger: CAAGAAAACTTCCAACAGCAACTCAAAGCAAACTAA...CTCGTCTGTGTGCATCTCACGCCCGACGTGGCTTCTGAAACGTGCATTCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR CAA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATCCAAGCACCGTGGATTaGCAGACAGACCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHPSTVD*QTDLAM
Trigger: CATTGCCAGGTCTGTCTGCAAATCCACGGTGCTTGG...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS TCA 90 bp TTGGTTGATTTCATGGATCCAAGTTTGCCGGACACTTGGACTAGATaGATGCAAAATGAAGGTCTCTACCACGTCACCCGTCCTCGATGT +
Preference number: 5 (lower is better)
Translates to: LVDFMDPSLPDTWTR*MQNEGLYHVTRPRC
Trigger: ACATCGAGGACGGGTGACGTGGTAGAGACCTTCATTTTGCATTCATCTAGTCCAAGTGTCCGGCAAACTTGGATCCATGAAATCAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000510281.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 90 bp ACAGCAACATCTCGATGCTTTATAACTTATCCAAGGTCATGTGCATaGGTTAGACATGTGCCCTGTATGGTGCTCGGGGTGAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: TATSRCFITYPRSCA*VRHVPCMVLGVRKA
Trigger: TGCCTTTCTCACCCCGAGCACCATACAGGGCACATGTCTAACTCATGCACATGACCTTGGATAAGTTATAAAGCATCGAGATGTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS GCA 90 bp TTGATTTCATGGATCCAAGTTTGCCGGACACTTGGACTAGATGAATaGAAAATGAAGGTCTCTACCACGTCACCCGTCCTCGATGTCAGA +
Preference number: 5 (lower is better)
Translates to: LISWIQVCRTLGLDE*KMKVSTTSPVLDVR
Trigger: TCTGACATCGAGGACGGGTGACGTGGTAGAGACCTTCATTTTGCATTCATCTAGTCCAAGTGTCCGGCAAACTTGGATCCATGAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000510281.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 90 bp AATACCCAGACGCGGTGGATTTCATTCTACCACACTGACTCTAATTaGAGCTCAAGGAAATTCTTCAGGCACCCTGGAAACCAGATGTCT +
Preference number: 5 (lower is better)
Translates to: NTQTRWISFYHTDSN*SSRKFFRHPGNQMS
Trigger: AGACATCTGGTTTCCAGGGTGCCTGAAGAATTTCCTTGAGCTCCAATTAGAGTCAGTGTGGTAGAATGAAATCCACCGCGTCTGGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS-3UTR CAA 90 bp TTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGAAAGAGCCTGAGTTCTTTTaGGGAAAGCTTTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: FPKSINSRAPSSGLEGGKEPEFF*GKLSLL
Trigger: GAGCAGTGAAAGCTTTCCCAAAAAGAACTCAGGCTC...TTTCCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp CTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGTGAGCGACTTCCCATCTaGGCTGACCTCAGAATAAGC +
Preference number: 5 (lower is better)
Translates to: LLCRKFLMLRIGRTSFWCERLPI*ADLRIS
Trigger: GCTTATTCTGAGGTCAGCCAAGATGGGAAGTCGCTC...ACACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTAAAGGGCCGCTGGAGCTaGTCAAGGAGCGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLKGRWS*SRSDFP
Trigger: TGGGAAGTCGCTCCTTGACAAGCTCCAGCGGCCCTT...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGACGCCGAACGAAATCTaGAATCCGGTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSTPNEI*NPVFQL
Trigger: CAGCTGGAAGACCGGATTCAAGATTTCGTTCGGCGT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AGCAAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTCAGAAGATCTTGCCCTaGGTGGATGACGTCAAAAGT +
Preference number: 5 (lower is better)
Translates to: SKFPKSINSRAPSSGLEGQKILP*VDDVKS
Trigger: ACTTTTGACGTCATCCACCAAGGGCAAGATCTTCTG...ACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCACATTCCAAAGCCTGCTaGGCACTCCTCTCAAAGACC +
Preference number: 5 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSHSKAC*ALLSKT
Trigger: GGTCTTTGAGAGGAGTGCCAAGCAGGCTTTGGAATG...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCCATTCCAAAGCCTGCTaGGCACTCCTCTCAAAGACC +
Preference number: 5 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSHSKAC*ALLSKT
Trigger: GGTCTTTGAGAGGAGTGCCAAGCAGGCTTTGGAATG...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp GCTGTAGTGACCATCGTTGTTCAAGGTGTTGTGTTCAGGGCCCTTCCAGGTAATTCTCTTTGGTTTGCTTaGCAGTTATCTGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: AVVTIVVQGVVFRALPGNSLWFA*QLSGTP
Trigger: AGGAGTTCCAGATAACTGCAAAGCAAACCAAAGAGA...ATTACCTGGAAGGGCCCTGAACACAACACCTTGAACAACGATGGTCACTACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp GGGTACCAGCCGCGGGGCGGCCAGTGCTTAATCGGCTTTTATTTCTTACCAAAAATAAGCCTTTTCAGTTaGAATGAGCTCAGCCATTAT +
Preference number: 5 (lower is better)
Translates to: GYQPRGGQCLIGFYFLPKISLFS*NELSHY
Trigger: ATAATGGCTGAGCTCATTCAAACTGAAAAGGCTTAT...TTTTGGTAAGAAATAAAAGCCGATTAAGCACTGGCCGCCCCGCGGCTGGTACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCAAGATGTTGACTTCTaGAGAGTCCCGTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEQDVDF*RVPSGF
Trigger: GAACCCGGACGGGACTCTCAAGAAGTCAACATCTTG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCCAAGATGTTGACTTCTaGAGAGTCCCGTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSQDVDF*RVPSGF
Trigger: GAACCCGGACGGGACTCTCAAGAAGTCAACATCTTG...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGTTCACAGATACCTTGTaGCTGAGTCCTTCCCGTGAC +
Preference number: 5 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWFTDTL*LSPSRD
Trigger: GTCACGGGAAGGACTCAGCAACAAGGTATCTGTGAA...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTCGTTGTTCAAGGTGTaGTGTTCAGGGCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSSLFKV*CSGPFQ
Trigger: CTGGAAGGGCCCTGAACACAACACCTTGAACAACGA...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CTGGAAGCTGCAAAGCTTAACTACGCCAGTTTATGGCTCAAGACCCAGGTGTCTTGCAAAAGTTTGAGGTaGAATGCACGTTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LEAAKLNYASLWLKTQVSCKSLR*NARFRS
Trigger: GCTTCTGAAACGTGCATTCAACCTCAAACTTTTGCA...AGACACCTGGGTCTTGAGCCATAAACTGGCGTAGTTAAGCTTTGCAGCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAACTGTTGGAAGTTTTCTaGAGGGAATGGTCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKLLEVF*REWSSP
Trigger: TGGGGAAGACCATTCCCTCAAGAAAACTTCCAACAG...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS GCA 90 bp TGTGTTCTGTGCCACTTCTTCAAAATCTTCATGACGTTTCTGCAATaGTCTGGCCCGATGAAGAGATTTCCCCACACCTGTATGTTTGCT +
Preference number: 5 (lower is better)
Translates to: CVLCHFFKIFMTFLQ*SGPMKRFPHTCMFA
Trigger: AGCAAACATACAGGTGTGGGGAAATCTCTTCATCGGGCCAGAGCATTGCAGAAACGTCATGAAGATTTTGAAGAAGTGGCACAGAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 90 bp TCTGTGCCACTTCTTCAAAATCTTCATGACGTTTCTGCAATGCTCTaGCCCGATGAAGAGATTTCCCCACACCTGTATGTTTGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SVPLLQNLHDVSAML*PDEEISPHLYVCSE
Trigger: TTCTGAGCAAACATACAGGTGTGGGGAAATCTCTTCATCGGGCCAGAGCATTGCAGAAACGTCATGAAGATTTTGAAGAAGTGGCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 90 bp AATCCATTTACAAACAGTGTCATTAGAAACTGCATAGATGCACACTaGGGTATGGAGGGTCCTTTACCTTCCAGCATGCTGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: NPFTNSVIRNCIDAH*GMEGPLPSSMLRCM
Trigger: CATGCACCTCAGCATGCTGGAAGGTAAAGGACCCTCCATACCCCAGTGTGCATCTATGCAGTTTCTAATGACACTGTTTGTAAATGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502490.1
CDS-3UTR CAA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGGAAGGATCAACTACTTaGGTAAGGCCTTCTAAAGAG +
Preference number: 5 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGEGSTT*VRPSKE
Trigger: CTCTTTAGAAGGCCTTACCAAAGTAGTTGATCCTTC...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp CTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGTCCCACACCTGTATGTTaGCTCAGAAATGCTTCTCCG +
Preference number: 5 (lower is better)
Translates to: LLCRKFLMLRIGRTSFWCPTPVC*LRNASP
Trigger: CGGAGAAGCATTTCTGAGCAAACATACAGGTGTGGG...ACACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATATACTGCAGAAGATCTaGCCCTTGGTGGATGACGTC +
Preference number: 5 (lower is better)
Translates to: NITFVGKVSIHLRWKSFHILQKI*PLVDDV
Trigger: GACGTCATCCACCAAGGGCAAGATCTTCTGCAGTAT...ATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCGAGGCCTGGACCTCATaGACATACTGCAGAAGATCT +
Preference number: 5 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSEAWTS*TYCRRS
Trigger: AGATCTTCTGCAGTATGTCAATGAGGTCCAGGCCTC...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACGGTCCTGGACCCGAGTaGCCATGTCTACATCTCTAT +
Preference number: 5 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNGPGPE*PCLHLY
Trigger: ATAGAGATGTAGACATGGCAACTCGGGTCCAGGACC...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATAGCTTCACTCTCTCTTaGGTTTGCTTTGCAGTTATC +
Preference number: 5 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNSFTLS*VCFAVI
Trigger: GATAACTGCAAAGCAAACCAAAGAGAGAGTGAAGCT...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCTCCTCCAGTGCCATCTaGCTTTTCACGAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSSSSAI*LFTSSS
Trigger: TGAGGAACTCGTGAAAAGCAAGATGGCACTGGAGGA...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CTTGGGAAGCGGGCTGGTCTCTTTTGTAGTGCAGTTCACACGAGAAAGATAAAAATTCTCTGCACTGGTTaGATCAACAGATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LGKRAGLFCSAVHTRKIKILCTG*INRSVS
Trigger: GCTCACAGATCTGTTGATCAAACCAGTGCAGAGAAT...TTTTATCTTTCTCGTGTGAACTGCACTACAAAAGAGACCAGCCCGCTTCCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000620511.1
CDS-3UTR CAA 90 bp TCCACCTTCGTTGGAAGAGTTTCCATAAGGACTAGCGGCTTGTGTGTGGGAAATGCCTTTTTGGAATACTaGAGGAAGTCCTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: STFVGRVSIRTSGLCVGNAFLEY*RKSFSN
Trigger: GTTACTGAAGGACTTCCTCAAGTATTCCAAAAAGGC...ATTTCCCACACACAAGCCGCTAGTCCTTATGGAAACTCTTCCAACGAAGGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGTTCCAGGCTGGCCTTTTaGGAATACTTGAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LLCRKFLMLRIGRTSFWCSRLAF*EYLRKS
Trigger: GGACTTCCTCAAGTATTCCAAAAAGGCCAGCCTGGA...ACACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGAGCTTCACAGATACCTaGTTGCTGAGTCCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: RPKAGTVLYTSKAYISSESFTDT*LLSPSR
Trigger: ACGGGAAGGACTCAGCAACAAGGTATCTGTGAAGCT...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGAGCTTCACAGATACCTaGTTGCTGAGTCCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSSFTDT*LLSPSR
Trigger: ACGGGAAGGACTCAGCAACAAGGTATCTGTGAAGCT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGCCAAAGTCAGCCAGTTaGATGGTTGGCTTGGCTAAA +
Preference number: 5 (lower is better)
Translates to: PALQKVFNATDRSNIILVPKSAS*MVGLAK
Trigger: TTTAGCCAAGCCAACCATCAAACTGGCTGACTTTGG...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS TCA 90 bp CACAGAAGCATGTCTGTCCAAATGACATTCTCTTCACTTTTCCAGTaGATCCTGGTAGATTCTGAAAGACTGGCTTACTCTTTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: HRSMSVQMTFSSLFQ*ILVDSERLAYSFLR
Trigger: CCGCAGGAAAGAGTAAGCCAGTCTTTCAGAATCTACCAGGATTCACTGGAAAAGTGAAGAGAATGTCATTTGGACAGACATGCTTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510757.1
CDS CCA 90 bp TTTGAAGCCCCACAAATGACTTATTGTTCTATCTTTCAGGCCACTTaGAGTGTAAGGGCAGACTCAGGACTTAAGGAGACTCCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: FEAPQMTYCSIFQAT*SVRADSGLKETPER
Trigger: TCTTTCAGGAGTCTCCTTAAGTCCTGAGTCTGCCCTTACACTCCAAGTGGCCTGAAAGATAGAACAATAAGTCATTTGTGGGGCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508343.1
CDS-3UTR CAA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCTTTAGAAACAGGCCTTaGTTGTGTGTGATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: HCSLGSFLITFLNDRESAFRNRP*LCVIQS
Trigger: TGACTGGATCACACACAACAAAGGCCTGTTTCTAAA...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGCACCATGAATCCACGTaGCTCATATACTTTTCGGCC +
Preference number: 5 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEHHEST*LIYFSA
Trigger: GGCCGAAAAGTATATGAGCAACGTGGATTCATGGTG...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCACACCATGAATCCACGTaGCTCATATACTTTTCGGCC +
Preference number: 5 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPHHEST*LIYFSA
Trigger: GGCCGAAAAGTATATGAGCAACGTGGATTCATGGTG...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACCCCACACCTGTATGTTaGCTCAGAAATGCTTCTCCG +
Preference number: 5 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNPTPVC*LRNASP
Trigger: CGGAGAAGCATTTCTGAGCAAACATACAGGTGTGGG...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp TTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACACGCCGAACGAAATCTaGAATCCGGTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: FRLEHFRTDWEVKLKTMNTPNEI*NPVFQL
Trigger: CAGCTGGAAGACCGGATTCAAGATTTCGTTCGGCGT...GTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTAAGGTCCTCCCCTTCCTaGATCACGTTGACAGTCACC +
Preference number: 5 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLRSSPS*ITLTVT
Trigger: GGTGACTGTCAACGTGATCAAGGAAGGGGAGGACCT...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTAGGAAGAGCTCCAGCTaGATCTTGCGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSRKSSS*ILRSWK
Trigger: CTTCCAGGAGCGCAAGATCAAGCTGGAGCTCTTCCT...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGGTCGAAGTCATTCATTaGCTGAGAAAGCTCATCATT +
Preference number: 5 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGVEVIH*LRKLII
Trigger: AATGATGAGCTTTCTCAGCAAATGAATGACTTCGAC...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp ATGGTTGGCTTGGCTAAACTCTCATCCACCAGGATATTCTCAGGCTTTAGGTCCGTCGAAGTCATTCATTaGCTGAGAAAGCTCATCATT +
Preference number: 5 (lower is better)
Translates to: MVGLAKLSSTRIFSGFRSVEVIH*LRKLII
Trigger: AATGATGAGCTTTCTCAGCAAATGAATGACTTCGAC...GGACCTAAAGCCTGAGAATATCCTGGTGGATGAGAGTTTAGCCAAGCCAACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGAGGCCTGGACCTCATaGACATACTGCAGAAGATCT +
Preference number: 5 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWEEAWTS*TYCRRS
Trigger: AGATCTTCTGCAGTATGTCAATGAGGTCCAGGCCTC...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTTGAGCATGAGCTGTaGCCAGTGAGACGCCACCTT +
Preference number: 5 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSLEHEL*PVRRHL
Trigger: AAGGTGGCGTCTCACTGGCAACAGCTCATGCTCAAG...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGAGGCGTTGACGAGCTaGAGGCGATCTTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTEALTS*RRSSIL
Trigger: CAAGATGGAAGATCGCCTCAAGCTCGTCAACGCCTC...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTAAAGCGACAGAGGCGTaGACGAGCTTGAGGCGATCT +
Preference number: 5 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSKATEA*TSLRRS
Trigger: AGATCGCCTCAAGCTCGTCAACGCCTCTGTCGCTTT...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp TCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCCCTGCCAAGATGATGAGTTCTTaGTTTACAATGCCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: SLGSFLITFLNDRESAPAKMMSS*FTMPGG
Trigger: TCCACCTGGCATTGTAAACAAAGAACTCATCATCTT...GGCAGGGGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AGAAGCCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCACCCACAGTGCAAATTaGCAAGGGTCTCCTTCAACA +
Preference number: 5 (lower is better)
Translates to: RSLLCRKFLMLRIGRTSFTHSAN*QGSPST
Trigger: TGTTGAAGGAGACCCTTGCAAATTTGCACTGTGGGT...GAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGGCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTCATGGATCCAAGTTaGCCGGACACTTGGACTAGA +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSFMDPS*PDTWTR
Trigger: TCTAGTCCAAGTGTCCGGCAAACTTGGATCCATGAA...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTCCTCTGGTACTCGATaGGCGATGTCAAGGCATTTA +
Preference number: 5 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQSSGTR*AMSRHL
Trigger: TAAATGCCTTGACATCGCCAATCGAGTACCAGAGGA...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp ACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGTTGAACGACCTCTCCTaGGTAGACGTTGATCTCATC +
Preference number: 5 (lower is better)
Translates to: TDRRQEQSYIQVRPTFHQLNDLS*VDVDLI
Trigger: GATGAGATCAACGTCTACCAAGGAGAGGTCGTTCAA...CTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGTTGAACGACCTCTCCTaGGTAGACGTTGATCTCATC +
Preference number: 5 (lower is better)
Translates to: RPKAGTVLYTSKAYISSELNDLS*VDVDLI
Trigger: GATGAGATCAACGTCTACCAAGGAGAGGTCGTTCAA...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000344204.9
CDS-3UTR CAA 90 bp CTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGTAGTTTGATGGTTGGCTaGGCTAAACTCTCATCCACC +
Preference number: 5 (lower is better)
Translates to: LLCRKFLMLRIGRTSFWCSLMVG*AKLSST
Trigger: GGTGGATGAGAGTTTAGCCAAGCCAACCATCAAACT...ACACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS TCA 90 bp TTCACCAGAAATGGAAGTGGACACCTTTGGCTTTTGGCCAAAGTCTaGAAATCCTCTGCCTTTCTCTTCAGATTTCTGGAGAAACAACAG +
Preference number: 5 (lower is better)
Translates to: FTRNGSGHLWLLAKV*KSSAFLFRFLEKQQ
Trigger: CTGTTGTTTCTCCAGAAATCTGAAGAGAAAGGCAGAGGATTTTCAGACTTTGGCCAAAAGCCAAAGGTGTCCACTTCCATTTCTGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507714.1
CDS TCA 90 bp ATAGCCAGCTTCAGCCAGGTGACTGGGAAAGCAGGTAACTCATGTTaGAGAAGGGATTTTAATTCCAACTCATTAACACCATGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: IASFSQVTGKAGNSC*RRDFNSNSLTPCSL
Trigger: CAAACTGCATGGTGTTAATGAGTTGGAATTAAAATCCCTTCTTCAACATGAGTTACCTGCTTTCCCAGTCACCTGGCTGAAGCTGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506611.1
CDS CCA 90 bp CCCTATGCAGTTCTTCCCTTGCCTATTTTGATCTGTGTCCTTTCATaGGAATACACTGCAAATGTGGGAATAATGGCTTTCCTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: PYAVLPLPILICVLS*EYTANVGIMAFLSS
Trigger: AGAACTCAGGAAAGCCATTATTCCCACATTTGCAGTGTATTCCCATGAAAGGACACAGATCAAAATAGGCAAGGGAAGAACTGCATAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS-3UTR CAA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGATCCATTCTTCGTGGTaGTATTCCAGGCAGCCATCA +
Preference number: 5 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWEIHSSW*YSRQPS
Trigger: TGATGGCTGCCTGGAATACAACCACGAAGAATGGAT...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp GAACATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTTTCATGGTCAAGGCTTaGTCTGCATGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: EHFRTDWEVKLKTMNNSSFMVKA*SAWCWR
Trigger: CCTCCAGCACCATGCAGACAAAGCCTTGACCATGAA...AGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AAGTTTCCTAAGTCTATAAACTCCAGAGCACCCTCTAGTGGACTTGAGGGTGGGATAAGCCTTTTCAGTTaGAATGAGCTCAGCCATTAT +
Preference number: 5 (lower is better)
Translates to: KFPKSINSRAPSSGLEGGISLFS*NELSHY
Trigger: ATAATGGCTGAGCTCATTCAAACTGAAAAGGCTTAT...CCCACCCTCAAGTCCACTAGAGGGTGCTCTGGAGTTTATAGACTTAGGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGATTCTCTGCACTGGTTaGATCAACAGATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSILCTG*INRSVS
Trigger: GCTCACAGATCTGTTGATCAAACCAGTGCAGAGAAT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CCTGCTCTGCAGAAAGTTTTTAATGCTACGGATAGGTCGAACATCATTCTGGTGGCCTTTTTGGAATACTaGAGGAAGTCCTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: PALQKVFNATDRSNIILVAFLEY*RKSFSN
Trigger: GTTACTGAAGGACTTCCTCAAGTATTCCAAAAAGGC...CACCAGAATGATGTTCGACCTATCCGTAGCATTAAAAACTTTCTGCAGAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATCACCATGAATCCACGTaGCTCATATACTTTTCGGCC +
Preference number: 5 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDHHEST*LIYFSA
Trigger: GGCCGAAAAGTATATGAGCAACGTGGATTCATGGTG...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGAGCGACTTCCCATCTaGGCTGACCTCAGAATAAGC +
Preference number: 5 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRERLPI*ADLRIS
Trigger: GCTTATTCTGAGGTCAGCCAAGATGGGAAGTCGCTC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAGTAATTTATCCGCATaGGTGTATGTGTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSSNLSA*VYVFCA
Trigger: GGCACAGAACACATACACCAATGCGGATAAATTACT...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGATTCATGGTCAAGGCTTaGTCTGCATGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRFMVKA*SAWCWR
Trigger: CCTCCAGCACCATGCAGACAAAGCCTTGACCATGAA...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCAACGTCAAAAGTCAAGTaGTTCATGGTCAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: KHHLRWKSFHPPSLEEFPTSKVK*FMVKAL
Trigger: CAAAGCCTTGACCATGAACAACTTGACTTTTGACGT...TGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATCATTCCAAAGCCTGCTaGGCACTCCTCTCAAAGACC +
Preference number: 5 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHHSKAC*ALLSKT
Trigger: GGTCTTTGAGAGGAGTGCCAAGCAGGCTTTGGAATG...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp GACAGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCATCTCTTTGGTTTGCTTaGCAGTTATCTGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: DRPKAGTVLYTSKAYISSSLWFA*QLSGTP
Trigger: AGGAGTTCCAGATAACTGCAAAGCAAACCAAAGAGA...TGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344204.9
CDS-3UTR CAA 90 bp CACTGCTCGCTTGGTTCCTTTCTGATCACATTTCTTAACGACAGAGAATCTGCCATAAGCCTTTTCAGTTaGAATGAGCTCAGCCATTAT +
Preference number: 5 (lower is better)
Translates to: HCSLGSFLITFLNDRESAISLFS*NELSHY
Trigger: ATAATGGCTGAGCTCATTCAAACTGAAAAGGCTTAT...GGCAGATTCTCTGTCGTTAAGAAATGTGATCAGAAAGGAACCAAGCGAGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS-3UTR CAA 90 bp CTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGATGATGAGTTCTTaGTTTACAATGCCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: LGFKNITFVGKVSIHLRWKMMSS*FTMPGG
Trigger: TCCACCTGGCATTGTAAACAAAGAACTCATCATCTT...CCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTTTATTATCTGAAGTaGGTGTTCTCCCCACCCACA +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSFYYLK*VFSPPT
Trigger: TGTGGGTGGGGAGAACACCAACTTCAGATAATAAAA...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAACGTTCATCATGTCGTaGCACCGCCTGGGTACTATG +
Preference number: 5 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRTFIMS*HRLGTM
Trigger: CATAGTACCCAGGCGGTGCAACGACATGATGAACGT...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp ACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCATACAAAGGCAACTCACCTaGATACTGTTCTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: TSPSLEKFPSTFVGRVSIQRQLT*ILFLNR
Trigger: CCTGTTTAAGAACAGTATCAAGGTGAGTTGCCTTTG...TATGGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGAAAACATCACCTTCGTaGGAAAAGTTTCCATCCACC +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSKTSPS*EKFPST
Trigger: GGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS TCA 90 bp ATGCAATTCTTTGAGGTAAAGTCTATTTCTCCGCAAGCATGGATATaGGCAGAAGATGGTGACTTAAAGGAAATGAAGACCATCCCTCCT +
Preference number: 5 (lower is better)
Translates to: MQFFEVKSISPQAWI*AEDGDLKEMKTIPP
Trigger: AGGAGGGATGGTCTTCATTTCCTTTAAGTCACCATCTTCTGCTCATATCCATGCTTGCGGAGAAATAGACTTTACCTCAAAGAATTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502490.1
CDS-3UTR CAA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGTTTAGAAACAGGCCTTaGTTGTGTGTGATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWEFRNRP*LCVIQS
Trigger: TGACTGGATCACACACAACAAAGGCCTGTTTCTAAA...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGAGTAATTTATCCGCATaGGTGTATGTGTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWESNLSA*VYVFCA
Trigger: GGCACAGAACACATACACCAATGCGGATAAATTACT...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGTTGGAAGAGTTTCCGTCGAAGTCATTCATTaGCTGAGAAAGCTCATCATT +
Preference number: 5 (lower is better)
Translates to: KTSPSLEKFPSTFVGRVSVEVIH*LRKLII
Trigger: AATGATGAGCTTTCTCAGCAAATGAATGACTTCGAC...GGAAACTCTTCCAACGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGTCTCTTTGGTTTGCTTaGCAGTTATCTGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: KMKTLPQFRLEHFRTDWESLWFA*QLSGTP
Trigger: AGGAGTTCCAGATAACTGCAAAGCAAACCAAAGAGA...CTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AAAGCTGGGTTTCAAAAACATCACCTTCGTTGGAAAAGTTTCCATCCACCTTCGCTTTTACTCGATTTGTaGGAATCTGAAGAAATCCCC +
Preference number: 5 (lower is better)
Translates to: KAGFQKHHLRWKSFHPPSLLLDL*ESEEIP
Trigger: GGGGATTTCTTCAGATTCCAACAAATCGAGTAAAAG...CGAAGGTGGATGGAAACTTTTCCAACGAAGGTGATGTTTTTGAAACCCAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTTCGAATTAAGGTTTTaGGGTCCCACACTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SLKMKTLPQFRLEHFRTDFELRF*GPTLGR
Trigger: CCTTCCAAGTGTGGGACCCAAAAACCTTAATTCGAA...ATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAGTTGCTGGCCAGAATTaGAACGACCTCTCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRVAGQN*NDLSLV
Trigger: TACCAAGGAGAGGTCGTTCAAATTCTGGCCAGCAAC...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTATACCCTGTTCTCCCGTaGGAAGAGTTCATTCAAGAT +
Preference number: 5 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLYPVLP*EEFIQD
Trigger: ATCTTGAATGAACTCTTCCAACGGGAGAACAGGGTA...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTGGGAGGTTAAACAAGATGATGAGTTCTTaGTTTACAATGCCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: KPYHNSDLNISGQIGRLNKMMSS*FTMPGG
Trigger: TCCACCTGGCATTGTAAACAAAGAACTCATCATCTT...GTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAACCCACAGTGCAAATTaGCAAGGGTCTCCTTCAACA +
Preference number: 5 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRTHSAN*QGSPST
Trigger: TGTTGAAGGAGACCCTTGCAAATTTGCACTGTGGGT...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp AGACCGAAGGCAGGAACAGTCTTATATACAAGTAAGGCCTACATTTCATCAGAGAAGATATTCTGCTGGTaGGAAATGGAAGAAACCAAA +
Preference number: 5 (lower is better)
Translates to: RPKAGTVLYTSKAYISSEKIFCW*EMEETK
Trigger: TTTGGTTTCTTCCATTTCCAACCAGCAGAATATCTT...CTCTGATGAAATGTAGGCCTTACTTGTATATAAGACTGTTCCTGCCTTCGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS-3UTR CAA 90 bp ATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAAGCTTCACTCTCTCTTaGGTTTGCTTTGCAGTTATC +
Preference number: 5 (lower is better)
Translates to: ISLKMKTLPQFRLEHFRTSFTLS*VCFAVI
Trigger: GATAACTGCAAAGCAAACCAAAGAGAGAGTGAAGCT...TGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS CCA 90 bp ATGAAAACCCTACCACAATTCAGACTTGAACATTTCAGGACAGATTaGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTACCTACA +
Preference number: 5 (lower is better)
Translates to: MKTLPQFRLEHFRTD*EVKLKTMNNSSLPT
Trigger: TGTAGGTAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATGTTCAAGTCTGAATTGTGGTAGGGTTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGATTTAGAAACAGGCCTTaGTTGTGTGTGATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRFRNRP*LCVIQS
Trigger: TGACTGGATCACACACAACAAAGGCCTGTTTCTAAA...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp TGGGAAATAATTTCACTGAAGATGAAAACCCTACCACAATTCAGACTTGAACATACGTCAAAAGTCAAGTaGTTCATGGTCAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: WEIISLKMKTLPQFRLEHTSKVK*FMVKAL
Trigger: CAAAGCCTTGACCATGAACAACTTGACTTTTGACGT...ATGTTCAAGTCTGAATTGTGGTAGGGTTTTCATCTTCAGTGAAATTATTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGATCTCTTTGGTTTGCTTaGCAGTTATCTGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRSLWFA*QLSGTP
Trigger: AGGAGTTCCAGATAACTGCAAAGCAAACCAAAGAGA...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS-3UTR CAA 90 bp CATTTCAGGACAGATTGGGAGGTTAAACTGAAGACAATGAACAATTCTTCTCTACTTTTACTCGATTTGTaGGAATCTGAAGAAATCCCC +
Preference number: 5 (lower is better)
Translates to: HFRTDWEVKLKTMNNSSLLLLDL*ESEEIP
Trigger: GGGGATTTCTTCAGATTCCAACAAATCGAGTAAAAG...TAGAGAAGAATTGTTCATTGTCTTCAGTTTAACCTCCCAATCTGTCCTGAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509967.6
CDS-3UTR CAA 90 bp AGTGCTATGAAAGCTCATGGAAATGTTCCAGAGATCTCCTTTATTAAAAACAGAATAAGCCTTTTCAGTTaGAATGAGCTCAGCCATTAT +
Preference number: 5 (lower is better)
Translates to: SAMKAHGNVPEISFIKNRISLFS*NELSHY
Trigger: ATAATGGCTGAGCTCATTCAAACTGAAAAGGCTTAT...TCTGTTTTTAATAAAGGAGATCTCTGGAACATTTCCATGAGCTTTCATAGCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS CAA 72 bp CCGCTGCTGAGCCGCCGCACGGGGCTGGTGAGCCACTaGCGCAGGGTGTTGCCCGGCCGCTTGGGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: PLLSRRTGLVSH*RRVLPGRLGPG
Trigger: GCCGGGCCCCAAGCGGCCGGGCAACACCCTGCGCAAGTGGCTCACCAGCCCCGTGCGGCGGCTCAGCAGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CAA 90 bp TCGGCCTTGCCGCTGCTGAGCCGCCGCACGGGGCTGGTGAGCCACTaGCGCAGGGTGTTGCCCGGCCGCTTGGGGCCCGGCGAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: SALPLLSRRTGLVSH*RRVLPGRLGPGELW
Trigger: CCAGAGCTCGCCGGGCCCCAAGCGGCCGGGCAACACCCTGCGCAAGTGGCTCACCAGCCCCGTGCGGCGGCTCAGCAGCGGCAAGGCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CCA 72 bp GCCCAGGCTAGCGCGCGCGTCCTTGGCGGGGGCGTCTaGGCTCGACCCCGAGGCGTTCGCGGCGCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: AQASARVLGGGV*ARPRGVRGAFP
Trigger: AGGAAAGGCGCCGCGAACGCCTCGGGGTCGAGCCCAGACGCCCCCGCCAAGGACGCGCGCGCTAGCCTGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000513206.5
ENST00000515144.5
CDS CAA 72 bp CCAAGCGGCAGGGTGCCCAGGCTAGCGCGCGCGTCCTaGGCGGGGGCGTCTGGGCTCGACCCCGAGGCGTTC +
Preference number: 6 (lower is better)
Translates to: PSGRVPRLARAS*AGASGLDPEAF
Trigger: GAACGCCTCGGGGTCGAGCCCAGACGCCCCCGCCAAGGACGCGCGCGCTAGCCTGGGCACCCTGCCGCTTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp GCCCAGCAGGCCGCAGGGACCGGCCCCAGCCTGCACTaGAGAGCCGCCTCGCCAGGTGCCCAGAGCAGTCTC +
Preference number: 6 (lower is better)
Translates to: AQQAAGTGPSLH*RAASPGAQSSL
Trigger: GAGACTGCTCTGGGCACCTGGCGAGGCGGCTCTGCAGTGCAGGCTGGGGCCGGTCCCTGCGGCCTGCTGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000515144.5
CDS CAA 72 bp GACGCGACAGGGACAGGCACACAGACTGGCAGCGTGTaGCTCAGCGGCCGGCGCCAGCCCACGGCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: DATGTGTQTGSV*LSGRRQPTARP
Trigger: GGGCCGGGCCGTGGGCTGGCGCCGGCCGCTGAGCAACACGCTGCCAGTCTGTGTGCCTGTCCCTGTCGCGTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS GCA 72 bp TCCTGCGGGGTGGCCGCACTGTCGTCGGAGTCCTTCTaGGAGCCGGCGTCGGCGCTCTTGCGGACCTCGCGG +
Preference number: 6 (lower is better)
Translates to: SCGVAALSSESF*EPASALLRTSR
Trigger: CCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTCGCAGAAGGACTCCGACGACAGTGCGGCCACCCCGCAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 72 bp ACGCGACAGGGACAGGCACACAGACTGGCAGCGTGTTaGTCAGCGGCCGGCGCCAGCCCACGGCCCGGCCCA +
Preference number: 6 (lower is better)
Translates to: TRQGQAHRLAAC*SAAGASPRPGP
Trigger: TGGGCCGGGCCGTGGGCTGGCGCCGGCCGCTGAGCAACACGCTGCCAGTCTGTGTGCCTGTCCCTGTCGCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS CCA 72 bp GGGGGAAGGGCTCCTTGCCGAGAGAAGGGACCGCGCTaGAGAGCGGCGAGTTCAGCGGCGAAGCGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: GGRAPCREKGPR*RAASSAAKRPR
Trigger: CCGGGGCCGCTTCGCCGCTGAACTCGCCGCTCTCCAGCGCGGTCCCTTCTCTCGGCAAGGAGCCCTTCCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp AGTAGCGCCGTGGGCCGGCCCGCAGGAGGGTTAGCCTaGTCCCAGGTAGAGGCCGCAACGGGCGGCGGAGAG +
Preference number: 6 (lower is better)
Translates to: SSAVGRPAGGLA*SQVEAATGGGE
Trigger: CTCTCCGCCGCCCGTTGCGGCCTCTACCTGGGACCAGGCTAACCCTCCTGCGGGCCGGCCCACGGCGCTACT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515144.5
CDS CAA 90 bp TTTCGAAACCCGGATCGGAAGAAGGCCGCGATGTCGGCCAGGTCCTaGGCCGCCTCCTCTGCCCCCTCGCCGGCACCGCCCCCGCAGCCC +
Preference number: 6 (lower is better)
Translates to: FRNPDRKKAAMSARS*AASSAPSPAPPPQP
Trigger: GGGCTGCGGGGGCGGTGCCGGCGAGGGGGCAGAGGAGGCGGCCAAGGACCTGGCCGACATCGCGGCCTTCTTCCGATCCGGGTTTCGAAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000502816.1
ENST00000505971.5
CDS CCA 72 bp CTGCCCCCGCTGCCGCCGCCGCCGCCGCCCCCGCTGTaGTTCCTCTGGTACTCGATTGGCGATGTCAAGGCA +
Preference number: 6 (lower is better)
Translates to: LPPLPPPPPPPL*FLWYSIGDVKA
Trigger: TGCCTTGACATCGCCAATCGAGTACCAGAGGAACCACAGCGGGGGCGGCGGCGGCGGCGGCAGCGGGGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000510281.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp TCCGGCCTCTCTCCTCGACCGTCTCGTCCTGCGGGGTaGCCGCACTGTCGTCGGAGTCCTTCTGCGAGCCGG +
Preference number: 6 (lower is better)
Translates to: SGLSPRPSRPAG*PHCRRSPSASR
Trigger: CCGGCTCGCAGAAGGACTCCGACGACAGTGCGGCCACCCCGCAGGACGAGACGGTCGAGGAGAGAGGCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CCA 72 bp TCCCAGGTAGAGGCCGCAACGGGCGGCGGAGAGCGCTaGGCAGCCGAGTTAGTGAGAACAGCCGCGGTGGCG +
Preference number: 6 (lower is better)
Translates to: SQVEAATGGGER*AAELVRTAAVA
Trigger: CGCCACCGCGGCTGTTCTCACTAACTCGGCTGCCCAGCGCTCTCCGCCGCCCGTTGCGGCCTCTACCTGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515144.5
CDS CAA 72 bp TGCTTGTGCGCCAGCTTCTTCACGTGCCCGTCGGCCTaGCCGCTGCTGAGCCGCCGCACGGGGCTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: CLCASFFTCPSA*PLLSRRTGLVS
Trigger: GCTCACCAGCCCCGTGCGGCGGCTCAGCAGCGGCAAGGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CAA 72 bp CTGGCCGAGGAGCACGTGCTCATGCGGTCAGTATCCTaGCCAGGGGCCGCGTGGCGGGGTGTCTGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: LAEEHVLMRSVS*PGAAWRGVCRW
Trigger: CCAGCGGCAGACACCCCGCCACGCGGCCCCTGGCAAGGATACTGACCGCATGAGCACGTGCTCCTCGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000513206.5
ENST00000515144.5
CDS CAA 90 bp GACTGCTCGCTGGCCGAGGAGCACGTGCTCATGCGGTCAGTATCCTaGCCAGGGGCCGCGTGGCGGGGTGTCTGCCGCTGGAGGGAGTCG +
Preference number: 6 (lower is better)
Translates to: DCSLAEEHVLMRSVS*PGAAWRGVCRWRES
Trigger: CGACTCCCTCCAGCGGCAGACACCCCGCCACGCGGCCCCTGGCAAGGATACTGACCGCATGAGCACGTGCTCCTCGGCCAGCGAGCAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000513206.5
ENST00000515144.5
CDS CAA 90 bp GAGCCGGCGTCGGCGCTCTTGCGGACCTCGCGGCTCTTCTTGTGCTaGTGCGCCAGCTTCTTCACGTGCCCGTCGGCCTTGCCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: EPASALLRTSRLFLC*CASFFTCPSALPLL
Trigger: CAGCAGCGGCAAGGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS TCA 72 bp AGGGGGAGGCAGGGAGGGCCCGGGGGTGGACGTACCTaGCATCTTGTCTGCCTCTGCCTGGCTCGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: RGRQGGPGGGRT*HLVCLCLARGC
Trigger: GCAGCCTCGAGCCAGGCAGAGGCAGACAAGATGTCAGGTACGTCCACCCCCGGGCCCTCCCTGCCTCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344204.9
ENST00000510281.1
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp CCCTCGTTCCGGCCTCTCTCCTCGACCGTCTCGTCCTaGGGGGTGGCCGCACTGTCGTCGGAGTCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: PSFRPLSSTVSS*GVAALSSESFC
Trigger: GCAGAAGGACTCCGACGACAGTGCGGCCACCCCGCAGGACGAGACGGTCGAGGAGAGAGGCCGGAACGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CCA 72 bp GTGCTCATGCGGTCAGTATCCTTGCCAGGGGCCGCGTaGCGGGGTGTCTGCCGCTGGAGGGAGTCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: VLMRSVSLPGAA*RGVCRWRESLS
Trigger: GGACAGCGACTCCCTCCAGCGGCAGACACCCCGCCACGCGGCCCCTGGCAAGGATACTGACCGCATGAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp CACAGACTGGGACGCGACAGGGACAGGCACACAGACTaGCAGCGTGTTGCTCAGCGGCCGGCGCCAGCCCAC +
Preference number: 6 (lower is better)
Translates to: HRLGRDRDRHTD*QRVAQRPAPAH
Trigger: GTGGGCTGGCGCCGGCCGCTGAGCAACACGCTGCCAGTCTGTGTGCCTGTCCCTGTCGCGTCCCAGTCTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS CAA 90 bp CTCTTCTTGTGCTTGTGCGCCAGCTTCTTCACGTGCCCGTCGGCCTaGCCGCTGCTGAGCCGCCGCACGGGGCTGGTGAGCCACTTGCGC +
Preference number: 6 (lower is better)
Translates to: LFLCLCASFFTCPSA*PLLSRRTGLVSHLR
Trigger: GCGCAAGTGGCTCACCAGCCCCGTGCGGCGGCTCAGCAGCGGCAAGGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CAA 90 bp TTCTGCGAGCCGGCGTCGGCGCTCTTGCGGACCTCGCGGCTCTTCTaGTGCTTGTGCGCCAGCTTCTTCACGTGCCCGTCGGCCTTGCCG +
Preference number: 6 (lower is better)
Translates to: FCEPASALLRTSRLF*CLCASFFTCPSALP
Trigger: CGGCAAGGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTCGCAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 72 bp CGGCTCTTCTTGTGCTTGTGCGCCAGCTTCTTCACGTaGCCGTCGGCCTTGCCGCTGCTGAGCCGCCGCACG +
Preference number: 6 (lower is better)
Translates to: RLFLCLCASFFT*PSALPLLSRRT
Trigger: CGTGCGGCGGCTCAGCAGCGGCAAGGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 72 bp GCGTCGGCGCTCTTGCGGACCTCGCGGCTCTTCTTGTaGTTGTGCGCCAGCTTCTTCACGTGCCCGTCGGCC +
Preference number: 6 (lower is better)
Translates to: ASALLRTSRLFL*LCASFFTCPSA
Trigger: GGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 72 bp CGTCGGAGTCCTTCTGCGAGCCGGCGTCGGCGCTCTTaGGGACCTCGCGGCTCTTCTTGTGCTTGTGCGCCA +
Preference number: 6 (lower is better)
Translates to: RRSPSASRRRRS*GPRGSSCACAP
Trigger: TGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTCGCAGAAGGACTCCGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CCA 72 bp CGGCGCCTTTCCTGGGGCTCTCCAGCACCTTCATCTTaGGGATCGGCTCCGCTTCTCGCTCGGACCCCTCGG +
Preference number: 6 (lower is better)
Translates to: RRLSWGSPAPSS*GSAPLLARTPR
Trigger: CCGAGGGGTCCGAGCGAGAAGCGGAGCCGATCCCCAAGATGAAGGTGCTGGAGAGCCCCAGGAAAGGCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000513206.5
ENST00000515144.5
CDS CAA 72 bp CCGGCGTCGGCGCTCTTGCGGACCTCGCGGCTCTTCTaGTGCTTGTGCGCCAGCTTCTTCACGTGCCCGTCG +
Preference number: 6 (lower is better)
Translates to: PASALLRTSRLF*CLCASFFTCPS
Trigger: CGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CAA 72 bp TCGTCGGAGTCCTTCTGCGAGCCGGCGTCGGCGCTCTaGCGGACCTCGCGGCTCTTCTTGTGCTTGTGCGCC +
Preference number: 6 (lower is better)
Translates to: SSESFCEPASAL*RTSRLFLCLCA
Trigger: GGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTCGCAGAAGGACTCCGACGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS CAA 90 bp GCCGCACTGTCGTCGGAGTCCTTCTGCGAGCCGGCGTCGGCGCTCTaGCGGACCTCGCGGCTCTTCTTGTGCTTGTGCGCCAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: AALSSESFCEPASAL*RTSRLFLCLCASFF
Trigger: GAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGACGCCGGCTCGCAGAAGGACTCCGACGACAGTGCGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS TCA 72 bp AGGTGCCCGGCTGCCCGCCGCTGCAGTAGGCTGAACTaGCAGAGGACAGCGAGTCCAGCGTGTCCACTGGCT +
Preference number: 6 (lower is better)
Translates to: RCPAARRCSRLN*QRTASPACPLA
Trigger: AGCCAGTGGACACGCTGGACTCGCTGTCCTCTGTCAGTTCAGCCTACTGCAGCGGCGGGCAGCCGGGCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS TCA 72 bp CTTGCAGGTGCCCGGCTGCCCGCCGCTGCAGTAGGCTaGACTGACAGAGGACAGCGAGTCCAGCGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: LAGARLPAAAVG*TDRGQRVQRVH
Trigger: GTGGACACGCTGGACTCGCTGTCCTCTGTCAGTTCAGCCTACTGCAGCGGCGGGCAGCCGGGCACCTGCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS GCA 72 bp GCGCTCTTGCGGACCTCGCGGCTCTTCTTGTGCTTGTaGGCCAGCTTCTTCACGTGCCCGTCGGCCTTGCCG +
Preference number: 6 (lower is better)
Translates to: ALLRTSRLFLCL*ASFFTCPSALP
Trigger: CGGCAAGGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 72 bp TTGTCATCCTGTGAGTCTGGCTGGAGGAGGCTGTGCTaGTGGATGGCCATGGGTGGCGGCAGGGGCACGGCG +
Preference number: 6 (lower is better)
Translates to: LSSCESGWRRLC*WMAMGGGRGTA
Trigger: CGCCGTGCCCCTGCCGCCACCCATGGCCATCCAGCAGCACAGCCTCCTCCAGCCAGACTCACAGGATGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 72 bp TGGACTGCACGGACTGCTCGCTGGCCGAGGAGCACGTaGTCATGCGGTCAGTATCCTTGCCAGGGGCCGCGT +
Preference number: 6 (lower is better)
Translates to: WTARTARWPRST*SCGQYPCQGPR
Trigger: ACGCGGCCCCTGGCAAGGATACTGACCGCATGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344204.9
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp TCTCCCTCGCTGGCGTCTGAGCGCGCGCGCGCGCGCTaGAGTTGGGTTTCACAAGTGGGAATACCCAGACGC +
Preference number: 6 (lower is better)
Translates to: SPSLASERARAR*SWVSQVGIPRR
Trigger: GCGTCTGGGTATTCCCACTTGTGAAACCCAACTGCAGCGCGCGCGCGCGCGCTCAGACGCCAGCGAGGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS GCA 72 bp GCGCTTACCCCGTTGCTCTGGGTGGACTGCACGGACTaGTCGCTGGCCGAGGAGCACGTGCTCATGCGGTCA +
Preference number: 6 (lower is better)
Translates to: ALTPLLWVDCTD*SLAEEHVLMRS
Trigger: TGACCGCATGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGGTAAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515144.5
CDS CCA 72 bp TCGCTGGCGTCTGAGCGCGCGCGCGCGCGCTGCAGTTaGGTTTCACAAGTGGGAATACCCAGACGCGGTGGA +
Preference number: 6 (lower is better)
Translates to: SLASERARARCS*VSQVGIPRRGG
Trigger: TCCACCGCGTCTGGGTATTCCCACTTGTGAAACCCAACTGCAGCGCGCGCGCGCGCGCTCAGACGCCAGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CAA 90 bp GTGAACCACAGGGGACCAGGCCTTCTGCCGCTGGGGAGCGGTCAGTaGTCCGCACCAGACACCAGTCAGGCTTGTCATGCGGCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: VNHRGPGLLPLGSGQ*SAPDTSQACHAAAP
Trigger: TGGAGCGGCCGCATGACAAGCCTGACTGGTGTCTGGTGCGGACAACTGACCGCTCCCCAGCGGCAGAAGGCCTGGTCCCCTGTGGTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344204.9
ENST00000507714.1
ENST00000509354.1
ENST00000512070.6
ENST00000512979.1
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp GCATCCCCGAGGAGGAGGATTTGGAGAGAGTACCGCTaGTCAGGCCCTCGTTCCGGCCTCTCTCCTCGACCG +
Preference number: 6 (lower is better)
Translates to: ASPRRRIWREYR*SGPRSGLSPRP
Trigger: CGGTCGAGGAGAGAGGCCGGAACGAGGGCCTGAGCAGCGGTACTCTCTCCAAATCCTCCTCCTCGGGGATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS GCA 72 bp CTGCTGCTGCTTTCACTCCCGTTGCTCTGGGTGGACTaGACGGACTGCTCGCTGGCCGAGGAGCACGTGCTC +
Preference number: 6 (lower is better)
Translates to: LLLLSLPLLWVD*TDCSLAEEHVL
Trigger: GAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGAGTGAAAGCAGCAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000513206.5
CDS GCA 72 bp AGACGGAGAGCGAGTCTAGGTCGAGGATCCAGTACTTaGAGGTGCCCGGCTGCCCGCCGCTGCAGTAGGCTG +
Preference number: 6 (lower is better)
Translates to: RRRASLGRGSST*RCPAARRCSRL
Trigger: CAGCCTACTGCAGCGGCGGGCAGCCGGGCACCTGCAAGTACTGGATCCTCGACCTAGACTCGCTCTCCGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS CCA 72 bp CCCCGTTGCTCTGGGTGGACTGCACGGACTGCTCGCTaGCCGAGGAGCACGTGCTCATGCGGTCAGTATCCT +
Preference number: 6 (lower is better)
Translates to: PRCSGWTARTAR*PRSTCSCGQYP
Trigger: AGGATACTGACCGCATGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515144.5
CDS CAA 72 bp AGGGGACCAGGCCTTCTGCCGCTGGGGAGCGGTCAGTaGTCCGCACCAGACACCAGTCAGGCTTGTCATGCG +
Preference number: 6 (lower is better)
Translates to: RGPGLLPLGSGQ*SAPDTSQACHA
Trigger: CGCATGACAAGCCTGACTGGTGTCTGGTGCGGACAACTGACCGCTCCCCAGCGGCAGAAGGCCTGGTCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344204.9
ENST00000507714.1
ENST00000509354.1
ENST00000512070.6
ENST00000512979.1
ENST00000513206.5
ENST00000515144.5
CDS CAA 72 bp TCGGCGCTCTTGCGGACCTCGCGGCTCTTCTTGTGCTaGTGCGCCAGCTTCTTCACGTGCCCGTCGGCCTTG +
Preference number: 6 (lower is better)
Translates to: SALLRTSRLFLC*CASFFTCPSAL
Trigger: CAAGGCCGACGGGCACGTGAAGAAGCTGGCGCACAAGCACAAGAAGAGCCGCGAGGTCCGCAAGAGCGCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000515710.1
ENST00000639876.2
CDS TCA 72 bp CCACAGCAACCCTTGTGCTTGAGACGGCAGCATGAGTaGTGGGCCAAACGAGGCCAGAGCCCAGCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: PQQPLCLRRQHE*WAKRGQSPAGR
Trigger: GCGGCCTGCTGGGCTCTGGCCTCGTTTGGCCCATCACTCATGCTGCCGTCTCAAGCACAAGGGTTGCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000515144.5
CDS GCA 72 bp CTTTCACTCCCGTTGCTCTGGGTGGACTGCACGGACTaGTCGCTGGCCGAGGAGCACGTGCTCATGCGGTCA +
Preference number: 6 (lower is better)
Translates to: LSLPLLWVDCTD*SLAEEHVLMRS
Trigger: TGACCGCATGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGAGTGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000513206.5
CDS CCA 72 bp GCAGATGCTGCCGTGTCGAGTGCAGCCGGTCCAGCATaGTGGACACCTTGGGCAAGAGGTTCTGCAGGTCCG +
Preference number: 6 (lower is better)
Translates to: ADAAVSSAAGPA*WTPWARGSAGP
Trigger: CGGACCTGCAGAACCTCTTGCCCAAGGTGTCCACCATGCTGGACCGGCTGCACTCGACACGGCAGCATCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000504606.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
CDS CCA 72 bp TCCCGTTGCTCTGGGTGGACTGCACGGACTGCTCGCTaGCCGAGGAGCACGTGCTCATGCGGTCAGTATCCT +
Preference number: 6 (lower is better)
Translates to: SRCSGWTARTAR*PRSTCSCGQYP
Trigger: AGGATACTGACCGCATGAGCACGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000513206.5
CDS CCA 72 bp TGCTACTGCTGCTGCTTTCACTCCCGTTGCTCTGGGTaGACTGCACGGACTGCTCGCTGGCCGAGGAGCACG +
Preference number: 6 (lower is better)
Translates to: CYCCCFHSRCSG*TARTARWPRST
Trigger: CGTGCTCCTCGGCCAGCGAGCAGTCCGTGCAGTCCACCCAGAGCAACGGGAGTGAAAGCAGCAGCAGTAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344204.9
ENST00000513206.5
CDS TCA 72 bp CCCACCACAGCAACCCTTGTGCTTGAGACGGCAGCATaGGTGATGGGCCAAACGAGGCCAGAGCCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: PTTATLVLETAA*VMGQTRPEPSR
Trigger: CCTGCTGGGCTCTGGCCTCGTTTGGCCCATCACTCATGCTGCCGTCTCAAGCACAAGGGTTGCTGTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000515144.5
CDS GCA 72 bp CGATGGCACAGGGCTACGACCCTACCGTCGAATCCTTaGAGCCGCCCCACGTTCATCATGTCGTTGCACCGC +
Preference number: 6 (lower is better)
Translates to: RWHRATTLPSNP*SRPTFIMSLHR
Trigger: GCGGTGCAACGACATGATGAACGTGGGGCGGCTGCAAGGATTCGACGGTAGGGTCGTAGCCCTGTGCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620511.1
CDS CCA 72 bp GATGCTGCCGTGTCGAGTGCAGCCGGTCCAGCATGGTaGACACCTTGGGCAAGAGGTTCTGCAGGTCCGCAT +
Preference number: 6 (lower is better)
Translates to: DAAVSSAAGPAW*TPWARGSAGPH
Trigger: ATGCGGACCTGCAGAACCTCTTGCCCAAGGTGTCCACCATGCTGGACCGGCTGCACTCGACACGGCAGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000504606.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
CDS CCA 72 bp GTCAGGGAATCGGAGCTGCCGGGAGTCAAGGGCCGCTaGAGCTTGTCAAGGAGCGACTTCCCATCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: VRESELPGVKGR*SLSRSDFPSWL
Trigger: CAGCCAAGATGGGAAGTCGCTCCTTGACAAGCTCCAGCGGCCCTTGACTCCCGGCAGCTCCGATTCCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp GCTGATCATGGGCGTCACGTGGTCCGTCTCAGAGTTTaGGCCCAGCTTATCCGCCCCGCCACACCAGTCTTC +
Preference number: 6 (lower is better)
Translates to: ADHGRHVVRLRV*AQLIRPATPVF
Trigger: GAAGACTGGTGTGGCGGGGCGGATAAGCTGGGCCCAAACTCTGAGACGGACCACGTGACGCCCATGATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp GGGAAGCCACGGATGCGGGTGGACTGGCGTCATTGCTaGAGACGGAGAGCGAGTCTAGGTCGAGGATCCAGT +
Preference number: 6 (lower is better)
Translates to: GKPRMRVDWRHC*RRRASLGRGSS
Trigger: ACTGGATCCTCGACCTAGACTCGCTCTCCGTCTCCAGCAATGACGCCAGTCCACCCGCATCCGTGGCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS CAA 72 bp GATGGGGTGAGGAGGGCGTGCATTCACCCAGAAGGGTaGCTGTTAGGGTCTCAGACAGGCACAGGGCCTGCG +
Preference number: 6 (lower is better)
Translates to: DGVRRACIHPEG*LLGSQTGTGPA
Trigger: CGCAGGCCCTGTGCCTGTCTGAGACCCTAACAGCAACCCTTCTGGGTGAATGCACGCCCTCCTCACCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508343.1
CDS CAA 72 bp CCGATGGCACAGGGCTACGACCCTACCGTCGAATCCTaGCAGCCGCCCCACGTTCATCATGTCGTTGCACCG +
Preference number: 6 (lower is better)
Translates to: PMAQGYDPTVES*QPPHVHHVVAP
Trigger: CGGTGCAACGACATGATGAACGTGGGGCGGCTGCAAGGATTCGACGGTAGGGTCGTAGCCCTGTGCCATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620511.1
CDS CAA 90 bp AGATGCTGCCGTGTCGAGTGCAGCCGGTCCAGCATGGTGGACACCTaGGGCAAGAGGTTCTGCAGGTCCGCATTGCCTGAGCCTGAGTTC +
Preference number: 6 (lower is better)
Translates to: RCCRVECSRSSMVDT*GKRFCRSALPEPEF
Trigger: GAACTCAGGCTCAGGCAATGCGGACCTGCAGAACCTCTTGCCCAAGGTGTCCACCATGCTGGACCGGCTGCACTCGACACGGCAGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000504606.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
CDS GCA 72 bp CGGTGTTGCCAGATGTTCTCCAGCTGCCGCTGGTGGTaGAGCACCTCGTGGATGACATCCAGGACATGGTGC +
Preference number: 6 (lower is better)
Translates to: RCCQMFSSCRWW*STSWMTSRTWC
Trigger: GCACCATGTCCTGGATGTCATCCACGAGGTGCTGCACCACCAGCGGCAGCTGGAGAACATCTGGCAACACCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp ATCACGTTGACAGTCACCTGCAGGGTGGTCTGCTGCTaGTGGCCAAAGCGCTTGATGAGGTCCTGCACGGCC +
Preference number: 6 (lower is better)
Translates to: ITLTVTCRVVCC*WPKRLMRSCTA
Trigger: GGCCGTGCAGGACCTCATCAAGCGCTTTGGCCAGCAGCAGCAGACCACCCTGCAGGTGACTGTCAACGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp TTGCGGATCCAACCCAGCACCTGTTTCACTTCTGCCTaGAGGTGGCGCAGCTGCACGCACTGCTCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: LRIQPSTCFTSA*RWRSCTHCSRC
Trigger: ACACCTGGAGCAGTGCGTGCAGCTGCGCCACCTGCAGGCAGAAGTGAAACAGGTGCTGGGTTGGATCCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp TGCCCCACTGGGTCACGTAGAATCCTCGTTGCACGGTaGTTACCTAGGACCCTCAGGCTGGCCGACGATGAG +
Preference number: 6 (lower is better)
Translates to: CPTGSRRILVAR*LPRTLRLADDE
Trigger: CTCATCGTCGGCCAGCCTGAGGGTCCTAGGTAAGCACCGTGCAACGAGGATTCTACGTGACCCAGTGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508343.1
CDS GCA 72 bp GCTCGGGTGAGCTGCTGTGGTTGGCAATCCTCTGTCTaGCTGACTCCACTGGGAGAGCATGGCTGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: ARVSCCGWQSSV*LTPLGEHGWQL
Trigger: AAGCTGCCAGCCATGCTCTCCCAGTGGAGTCAGGCAGACAGAGGATTGCCAACCACAGCAGCTCACCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CCA 72 bp ATGTTCTCCAGCTGCCGCTGGTGGTGCAGCACCTCGTaGATGACATCCAGGACATGGTGCACGGCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: MFSSCRWWCSTS*MTSRTWCTALE
Trigger: CTCCAAGGCCGTGCACCATGTCCTGGATGTCATCCACGAGGTGCTGCACCACCAGCGGCAGCTGGAGAACAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CAA 72 bp GAATCGGAGCTGCCGGGAGTCAAGGGCCGCTGGAGCTaGTCAAGGAGCGACTTCCCATCTTGGCTGACCTCA +
Preference number: 6 (lower is better)
Translates to: ESELPGVKGRWS*SRSDFPSWLTS
Trigger: TGAGGTCAGCCAAGATGGGAAGTCGCTCCTTGACAAGCTCCAGCGGCCCTTGACTCCCGGCAGCTCCGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CAA 72 bp GAAAGACGTGCCCCACTGGGTCACGTAGAATCCTCGTaGCACGGTGCTTACCTAGGACCCTCAGGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: ERRAPLGHVESS*HGAYLGPSGWP
Trigger: CGGCCAGCCTGAGGGTCCTAGGTAAGCACCGTGCAACGAGGATTCTACGTGACCCAGTGGGGCACGTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508343.1
CDS TCA 72 bp CCCTTCTGTCTTGTGGCGGGAGCGGTCTTAGGGATGTaGATGGGCTCCTTCAGGGCTCCCTTCAGGTGGATC +
Preference number: 6 (lower is better)
Translates to: PFCLVAGAVLGM*MGSFRAPFRWI
Trigger: GATCCACCTGAAGGGAGCCCTGAAGGAGCCCATTCACATCCCTAAGACCGCTCCCGCCACAAGACAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 72 bp CATTTCCATGCTACTTCTGGAGTGGGCGATGCACAGTaGACCACAGGGGACCAGGCCTTCTGCCGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: HFHATSGVGDAQ*TTGDQAFCRWG
Trigger: TCCCCAGCGGCAGAAGGCCTGGTCCCCTGTGGTTCACTGTGCATCGCCCACTCCAGAAGTAGCATGGAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344204.9
ENST00000507714.1
ENST00000509354.1
ENST00000512070.6
ENST00000512979.1
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp AAACACACAGCTGCAGCCTCTGATGCAGCCGGACCTTaGGGTGTTGCCAGATGTTCTCCAGCTGCCGCTGGT +
Preference number: 6 (lower is better)
Translates to: KHTAAASDAAGP*GVARCSPAAAG
Trigger: ACCAGCGGCAGCTGGAGAACATCTGGCAACACCGCAAGGTCCGGCTGCATCAGAGGCTGCAGCTGTGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp TTCACTTCTGCCTGCAGGTGGCGCAGCTGCACGCACTaGTCCAGGTGTTTCCGATGCTGCTCTGCGGCTAAA +
Preference number: 6 (lower is better)
Translates to: FTSACRWRSCTH*SRCFRCCSAAK
Trigger: TTTAGCCGCAGAGCAGCATCGGAAACACCTGGAGCAGTGCGTGCAGCTGCGCCACCTGCAGGCAGAAGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp TCCGTGAGGCGATGGAAATCGTATCAGGCTGGCTGCTaGCGTCTCCTTGGCTGTCCAGATCCTCTCCATCCC +
Preference number: 6 (lower is better)
Translates to: SVRRWKSYQAGC*RLLGCPDPLHP
Trigger: GGGATGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTCCATCGCCTCACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000512303.1
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp AGACAGAGCGCTCCAGGGCCACTTCCAGTAGGGGTCTaGCACCCATGCCCCACTGATTCCTACCTTTGTGGT +
Preference number: 6 (lower is better)
Translates to: RQSAPGPLPVGV*HPCPTDSYLCG
Trigger: ACCACAAAGGTAGGAATCAGTGGGGCATGGGTGGCAGACCCCTACTGGAAGTGGCCCTGGAGCGCTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509354.1
CDS CCA 72 bp TTGCGGTGTTGCCAGATGTTCTCCAGCTGCCGCTGGTaGTGCAGCACCTCGTGGATGACATCCAGGACATGG +
Preference number: 6 (lower is better)
Translates to: LRCCQMFSSCRW*CSTSWMTSRTW
Trigger: CCATGTCCTGGATGTCATCCACGAGGTGCTGCACCACCAGCGGCAGCTGGAGAACATCTGGCAACACCGCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp TTCTGCTCCAGGTGCTTGCTGATCATGGGCGTCACGTaGTCCGTCTCAGAGTTTGGGCCCAGCTTATCCGCC +
Preference number: 6 (lower is better)
Translates to: FCSRCLLIMGVT*SVSEFGPSLSA
Trigger: GGCGGATAAGCTGGGCCCAAACTCTGAGACGGACCACGTGACGCCCATGATCAGCAAGCACCTGGAGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp AGCGCGCGCGCGCGCGCTGCAGTTGGGTTTCACAAGTaGGAATACCCAGACGCGGTGGATTTCATTCTACCA +
Preference number: 6 (lower is better)
Translates to: SARARAAVGFHK*EYPDAVDFILP
Trigger: TGGTAGAATGAAATCCACCGCGTCTGGGTATTCCCACTTGTGAAACCCAACTGCAGCGCGCGCGCGCGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CCA 72 bp AGCAGCGACCAGCTAAACAGACACTCAGACACAGACTaGGACGCGACAGGGACAGGCACACAGACTGGCAGC +
Preference number: 6 (lower is better)
Translates to: SSDQLNRHSDTD*DATGTGTQTGS
Trigger: GCTGCCAGTCTGTGTGCCTGTCCCTGTCGCGTCCCAGTCTGTGTCTGAGTGTCTGTTTAGCTGGTCGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS CAA 72 bp GATGGAAATCGTATCAGGCTGGCTGCTGCCGTCTCCTaGGCTGTCCAGATCCTCTCCATCCCTGGCGGTGCA +
Preference number: 6 (lower is better)
Translates to: DGNRIRLAAAVS*AVQILSIPGGA
Trigger: TGCACCGCCAGGGATGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS CAA 90 bp CTGACAGAGGACAGCGAGTCCAGCGTGTCCACTGGCTTCAATCCGTaGGGCATGGTGACTGGAGCCGACTGGAGGCTAAAGGTGCAGAAC +
Preference number: 6 (lower is better)
Translates to: LTEDSESSVSTGFNP*GMVTGADWRLKVQN
Trigger: GTTCTGCACCTTTAGCCTCCAGTCGGCTCCAGTCACCATGCCCAACGGATTGAAGCCAGTGGACACGCTGGACTCGCTGTCCTCTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS CAA 90 bp GCCCAAACAGACACTCAACACCAAGGCTCGGGTGAGCTGCTGTGGTaGGCAATCCTCTGTCTGCCTGACTCCACTGGGAGAGCATGGCTG +
Preference number: 6 (lower is better)
Translates to: AQTDTQHQGSGELLW*AILCLPDSTGRAWL
Trigger: CAGCCATGCTCTCCCAGTGGAGTCAGGCAGACAGAGGATTGCCAACCACAGCAGCTCACCCGAGCCTTGGTGTTGAGTGTCTGTTTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS GCA 72 bp TCCTTGATCACGTTGACAGTCACCTGCAGGGTGGTCTaGTGCTGCTGGCCAAAGCGCTTGATGAGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: SLITLTVTCRVV*CCWPKRLMRSC
Trigger: GCAGGACCTCATCAAGCGCTTTGGCCAGCAGCAGCAGACCACCCTGCAGGTGACTGTCAACGTGATCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp ACGTCCGTGAGGCGATGGAAATCGTATCAGGCTGGCTaGTGCCGTCTCCTTGGCTGTCCAGATCCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: TSVRRWKSYQAG*CRLLGCPDPLH
Trigger: ATGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTCCATCGCCTCACGGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000512303.1
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp GGATCATGTCCATGTCGTAGTGGTTGGCCTGTAGCATaGCTTCTGCCTTCTGCTGCACCTGCAGCGCGCTCT +
Preference number: 6 (lower is better)
Translates to: GSCPCRSGWPVA*LLPSAAPAARS
Trigger: AGAGCGCGCTGCAGGTGCAGCAGAAGGCAGAAGCCATGCTACAGGCCAACCACTACGACATGGACATGATCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp ATGGAAATCGTATCAGGCTGGCTGCTGCCGTCTCCTTaGCTGTCCAGATCCTCTCCATCCCTGGCGGTGCAA +
Preference number: 6 (lower is better)
Translates to: MEIVSGWLLPSP*LSRSSPSLAVQ
Trigger: TTGCACCGCCAGGGATGGAGAGGATCTGGACAGCCAAGGAGACGGCAGCAGCCAGCCTGATACGATTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS CCA 72 bp CGTGTCCACTGGCTTCAATCCGTTGGGCATGGTGACTaGAGCCGACTGGAGGCTAAAGGTGCAGAACCCCTA +
Preference number: 6 (lower is better)
Translates to: RVHWLQSVGHGD*SRLEAKGAEPL
Trigger: TAGGGGTTCTGCACCTTTAGCCTCCAGTCGGCTCCAGTCACCATGCCCAACGGATTGAAGCCAGTGGACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS CCA 72 bp ACAGACACTCAACACCAAGGCTCGGGTGAGCTGCTGTaGTTGGCAATCCTCTGTCTGCCTGACTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: TDTQHQGSGELL*LAILCLPDSTG
Trigger: CCCAGTGGAGTCAGGCAGACAGAGGATTGCCAACCACAGCAGCTCACCCGAGCCTTGGTGTTGAGTGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CAA 72 bp GACACTCAACACCAAGGCTCGGGTGAGCTGCTGTGGTaGGCAATCCTCTGTCTGCCTGACTCCACTGGGAGA +
Preference number: 6 (lower is better)
Translates to: DTQHQGSGELLW*AILCLPDSTGR
Trigger: TCTCCCAGTGGAGTCAGGCAGACAGAGGATTGCCAACCACAGCAGCTCACCCGAGCCTTGGTGTTGAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS TCA 72 bp CAGCCACCAGAGAGCTTATCGCTGTCCAGCGTGTTCTaGGACGTCCGTGAGGCGATGGAAATCGTATCAGGC +
Preference number: 6 (lower is better)
Translates to: QPPESLSLSSVF*DVREAMEIVSG
Trigger: GCCTGATACGATTTCCATCGCCTCACGGACGTCTCAGAACACGCTGGACAGCGATAAGCTCTCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000512303.1
ENST00000513206.5
ENST00000515144.5
CDS TCA 72 bp GGAGAGCATGGCTGGCAGCTTGAACCAGGCACTCCCTaGGACCTGCCCTATGCAGTTCTTCCCTTGCCTATT +
Preference number: 6 (lower is better)
Translates to: GEHGWQLEPGTP*DLPYAVLPLPI
Trigger: AATAGGCAAGGGAAGAACTGCATAGGGCAGGTCTCAGGGAGTGCCTGGTTCAAGCTGCCAGCCATGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS GCA 72 bp CATATCAGCCTTCGTGAGTGCCTGCTGCTGCCAGGATaGGGACAATGGTTAAGGCACCCTTCACCGAGCACA +
Preference number: 6 (lower is better)
Translates to: HISLRECLLLPG*GQWLRHPSPST
Trigger: TGTGCTCGGTGAAGGGTGCCTTAACCATTGTCCGCATCCTGGCAGCAGCAGGCACTCACGAAGGCTGATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS GCA 72 bp CCCAAACAGACACTCAACACCAAGGCTCGGGTGAGCTaGTGTGGTTGGCAATCCTCTGTCTGCCTGACTCCA +
Preference number: 6 (lower is better)
Translates to: PKQTLNTKARVS*CGWQSSVCLTP
Trigger: TGGAGTCAGGCAGACAGAGGATTGCCAACCACAGCAGCTCACCCGAGCCTTGGTGTTGAGTGTCTGTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS GCA 72 bp GCTGACCACATTTGCAGTGACTGCAGGCAGGGTATGTaGAGTGAGGTTTGCCCCCAGCTTCTAGGAGGGAAC +
Preference number: 6 (lower is better)
Translates to: ADHICSDCRQGM*SEVCPQLLGGN
Trigger: GTTCCCTCCTAGAAGCTGGGGGCAAACCTCACTGCACATACCCTGCCTGCAGTCACTGCAAATGTGGTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CCA 72 bp TCCTTCAGGGCTCCCTTCAGGTGGATCGTCCGCTCCTaGATGACTTCGCGGATATGCTTTATCCAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: SFRAPFRWIVRS*MTSRICFIQSC
Trigger: GCAGGACTGGATAAAGCATATCCGCGAAGTCATCCAGGAGCGGACGATCCACCTGAAGGGAGCCCTGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp GGCTTCAATCCGTTGGGCATGGTGACTGGAGCCGACTaGAGGCTAAAGGTGCAGAACCCCTATCCTACCTCT +
Preference number: 6 (lower is better)
Translates to: GFNPLGMVTGAD*RLKVQNPYPTS
Trigger: AGAGGTAGGATAGGGGTTCTGCACCTTTAGCCTCCAGTCGGCTCCAGTCACCATGCCCAACGGATTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515710.1
ENST00000639876.2
CDS CAA 90 bp GGTGGACTGGCGTCATTGCTGGAGACGGAGAGCGAGTCTTTGTGGTaGAAGATGCCCTCCATTTCCATGCTACTTCTGGAGTGGGCGATG +
Preference number: 6 (lower is better)
Translates to: GGLASLLETESESLW*KMPSISMLLLEWAM
Trigger: CATCGCCCACTCCAGAAGTAGCATGGAAATGGAGGGCATCTTCAACCACAAAGACTCGCTCTCCGTCTCCAGCAATGACGCCAGTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 72 bp TCAGGGCTCCCTTCAGGTGGATCGTCCGCTCCTGGATaGCTTCGCGGATATGCTTTATCCAGTCCTGCTTGT +
Preference number: 6 (lower is better)
Translates to: SGLPSGGSSAPG*LRGYALSSPAC
Trigger: ACAAGCAGGACTGGATAAAGCATATCCGCGAAGTCATCCAGGAGCGGACGATCCACCTGAAGGGAGCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 72 bp GTGCCATCTTGCTTTTCACGAGTTCCTCAATTGCACTaGCGAGCTCGGCTGCACTCGGTGTTTCGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VPSCFSRVPQLH*RARLHSVFRSW
Trigger: CCAGCTCCGAAACACCGAGTGCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTGAAAAGCAAGATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000639876.2
CDS TCA 72 bp CAGGTGCTGATGGACTGGAAATGCCCGGACAGTCAGTaGCCATGTGCTGAAGGCACAGCTGACAAGGAAGCT +
Preference number: 6 (lower is better)
Translates to: QVLMDWKCPDSQ*PCAEGTADKEA
Trigger: AGCTTCCTTGTCAGCTGTGCCTTCAGCACATGGTCACTGACTGTCCGGGCATTTCCAGTCCATCAGCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509354.1
CDS TCA 72 bp AAGGTCAGCCACACAGAGCAGTCAGCCATATGCGTCTaGGCCCAAACAGACACTCAACACCAAGGCTCGGGT +
Preference number: 6 (lower is better)
Translates to: KVSHTEQSAICV*AQTDTQHQGSG
Trigger: ACCCGAGCCTTGGTGTTGAGTGTCTGTTTGGGCTCAGACGCATATGGCTGACTGCTCTGTGTGGCTGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS GCA 72 bp TTCAGACAGACTGGAGCTGACCACATTTGCAGTGACTaGAGGCAGGGTATGTGCAGTGAGGTTTGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: FRQTGADHICSD*RQGMCSEVCPQ
Trigger: CTGGGGGCAAACCTCACTGCACATACCCTGCCTGCAGTCACTGCAAATGTGGTCAGCTCCAGTCTGTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CCA 72 bp CGTGCTCTTTCAGGAGCTCCTGGGTGTGCTGTATACTaGAGCCCGTGGAGGTGTGTGTGGAAAGGTAGAACT +
Preference number: 6 (lower is better)
Translates to: RALSGAPGCAVY*SPWRCVWKGRT
Trigger: AGTTCTACCTTTCCACACACACCTCCACGGGCTCCAGTATACAGCACACCCAGGAGCTCCTGAAAGAGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp TTGAAGATGCCCTCCATTTCCATGCTACTTCTGGAGTaGGCGATGCACAGTGAACCACAGGGGACCAGGCCT +
Preference number: 6 (lower is better)
Translates to: LKMPSISMLLLE*AMHSEPQGTRP
Trigger: AGGCCTGGTCCCCTGTGGTTCACTGTGCATCGCCCACTCCAGAAGTAGCATGGAAATGGAGGGCATCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344204.9
ENST00000507714.1
ENST00000509354.1
ENST00000512070.6
ENST00000512979.1
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp GGCTGCTACTATCTCCCTGGTCAACAAGGAGTGAGCTaGGGCGATCCTCCAGTGCCATCTTGCTTTTCACGA +
Preference number: 6 (lower is better)
Translates to: GCYYLPGQQGVS*GDPPVPSCFSR
Trigger: TCGTGAAAAGCAAGATGGCACTGGAGGATCGCCCCAGCTCACTCCTTGTTGACCAGGGAGATAGTAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000620511.1
ENST00000639876.2
CDS CCA 72 bp CACCACGAGGGGAAGCCCACCGCTGTTCCAAATGCATaGGCAGCTTCACCAGAAATGGAAGTGGACACCTTT +
Preference number: 6 (lower is better)
Translates to: HHEGKPTAVPNA*AASPEMEVDTF
Trigger: AAAGGTGTCCACTTCCATTTCTGGTGAAGCTGCCCATGCATTTGGAACAGCGGTGGGCTTCCCCTCGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507714.1
CDS TCA 72 bp TGCCCAGAGCAGTCTCTGTCTTCCAGAGCAACACGGTaGCGTAAAGCGTTCCCAGTGGACAGATTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: CPEQSLSSRATR*RKAFPVDRFFP
Trigger: GGGAAAGAATCTGTCCACTGGGAACGCTTTACGTCACCGTGTTGCTCTGGAAGACAGAGACTGCTCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000515144.5
CDS TCA 72 bp TCACCATCTTGCTTTTCACGAGTTCCTCAATTGCACTaGCGAGCTCGGCTGCACTCGGTGTTTCGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SPSCFSRVPQLH*RARLHSVFRSW
Trigger: CCAGCTCCGAAACACCGAGTGCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTGAAAAGCAAGATGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS GCA 72 bp CGCAGCTGCACGCACTGCTCCAGGTGTTTCCGATGCTaGTCTGCGGCTAAATCCAATTCCTGCTGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: RSCTHCSRCFRC*SAAKSNSCCFS
Trigger: TGAAAAACAGCAGGAATTGGATTTAGCCGCAGAGCAGCATCGGAAACACCTGGAGCAGTGCGTGCAGCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp GAAGATGCGCCTCTCTCTGCAGCGAGGCAGAAGTCCTaGATCTTGGTCTGTGACCAAGAATGTGTCCTGCAA +
Preference number: 6 (lower is better)
Translates to: EDAPLSAARQKS*ILVCDQECVLQ
Trigger: TTGCAGGACACATTCTTGGTCACAGACCAAGATGCAGGACTTCTGCCTCGCTGCAGAGAGAGGCGCATCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000510281.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp AGGCCTCACCATCTTGCTTTTCACGAGTTCCTCAATTaGACTGACGAGCTCGGCTGCACTCGGTGTTTCGGA +
Preference number: 6 (lower is better)
Translates to: RPHHLAFHEFLN*TDELGCTRCFG
Trigger: TCCGAAACACCGAGTGCAGCCGAGCTCGTCAGTGCAATTGAGGAACTCGTGAAAAGCAAGATGGTGAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CCA 72 bp CGTACTGCTGACACTGGTCCAGCCGTCTCTTCCTCATaGTCCAGTAATGCAATACCCTGTTCTCCCGTTGGA +
Preference number: 6 (lower is better)
Translates to: RTADTGPAVSSS*SSNAIPCSPVG
Trigger: TCCAACGGGAGAACAGGGTATTGCATTACTGGACCATGAGGAAGAGACGGCTGGACCAGTGTCAGCAGTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp GTGACCAAGAATGTGTCCTGCAAGAGCAGTTTACCCTaGGCAACGATTTTCCCGTCGAATCCTTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: VTKNVSCKSSLP*ATIFPSNPCSR
Trigger: GCGGCTGCAAGGATTCGACGGGAAAATCGTTGCCCAGGGTAAACTGCTCTTGCAGGACACATTCTTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp TGCCTGTTCACAGACACCCCAGATACTGTTCAGGCCTaGCTCTGGTCTTCTCTCACCAACCTGTACTGTTGC +
Preference number: 6 (lower is better)
Translates to: CLFTDTPDTVQA*LWSSLTNLYCC
Trigger: GCAACAGTACAGGTTGGTGAGAGAAGACCAGAGCCAGGCCTGAACAGTATCTGGGGTGTCTGTGAACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506611.1
CDS CCA 72 bp AGGTGTGTACGCACATTTCTAAGACCAGGATGTAGCTaGTGGGGGTCTCAAAGGTGTCGAGGAGGCCGACAA +
Preference number: 6 (lower is better)
Translates to: RCVRTFLRPGCS*WGSQRCRGGRQ
Trigger: TTGTCGGCCTCCTCGACACCTTTGAGACCCCCACCAGCTACATCCTGGTCTTAGAAATGTGCGTACACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508283.5
CDS GCA 72 bp TGGACACCTTGGGCAAGAGGTTCTGCAGGTCCGCATTaGCTGAGCCTGAGTTCTTTTTGGGAAAGCTTTCAC +
Preference number: 6 (lower is better)
Translates to: WTPWARGSAGPH*LSLSSFWESFH
Trigger: GTGAAAGCTTTCCCAAAAAGAACTCAGGCTCAGGCAATGCGGACCTGCAGAACCTCTTGCCCAAGGTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000504606.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
CDS GCA 72 bp TGCGTCACCATTCCTGGCATGTTCACGCTGTTCCTGTaGAGGTATTTCAGGAAGACGTCTGCATTCCTCCGA +
Preference number: 6 (lower is better)
Translates to: CVTIPGMFTLFL*RYFRKTSAFLR
Trigger: TCGGAGGAATGCAGACGTCTTCCTGAAATACCTGCACAGGAACAGCGTGAACATGCCAGGAATGGTGACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp TGGCACATCTTCAGACAGACTGGAGCTGACCACATTTaGAGTGACTGCAGGCAGGGTATGTGCAGTGAGGTT +
Preference number: 6 (lower is better)
Translates to: WHIFRQTGADHI*SDCRQGMCSEV
Trigger: AACCTCACTGCACATACCCTGCCTGCAGTCACTGCAAATGTGGTCAGCTCCAGTCTGTCTGAAGATGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CCA 72 bp GGGTGTGCTGTATACTGGAGCCCGTGGAGGTGTGTGTaGAAAGGTAGAACTCGCCATTGTCATGGATCCATT +
Preference number: 6 (lower is better)
Translates to: GCAVYWSPWRCV*KGRTRHCHGSI
Trigger: AATGGATCCATGACAATGGCGAGTTCTACCTTTCCACACACACCTCCACGGGCTCCAGTATACAGCACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp CTGGCGTCATTGCTGGAGACGGAGAGCGAGTCTTTGTaGTTGAAGATGCCCTCCATTTCCATGCTACTTCTG +
Preference number: 6 (lower is better)
Translates to: LASLLETESESL*LKMPSISMLLL
Trigger: CAGAAGTAGCATGGAAATGGAGGGCATCTTCAACCACAAAGACTCGCTCTCCGTCTCCAGCAATGACGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp CCGAGAGGTCACTCTCCTGTGACATCCCAGACACTCTaGTCTGCTACTTACAACTGTCTTTTGAAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: PRGHSPVTSQTL*SATYNCLLKPH
Trigger: GTGGGGCTTCAAAAGACAGTTGTAAGTAGCAGACCAGAGTGTCTGGGATGTCACAGGAGAGTGACCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508343.1
CDS CAA 72 bp GCTGTGATAAGTCCGGCATTTAACATGGACTCTCCGTaGCGGATCCAACCCAGCACCTGTTTCACTTCTGCC +
Preference number: 6 (lower is better)
Translates to: AVISPAFNMDSP*RIQPSTCFTSA
Trigger: GGCAGAAGTGAAACAGGTGCTGGGTTGGATCCGCAACGGAGAGTCCATGTTAAATGCCGGACTTATCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CAA 72 bp GCGTCATTGCTGGAGACGGAGAGCGAGTCTTTGTGGTaGAAGATGCCCTCCATTTCCATGCTACTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: ASLLETESESLW*KMPSISMLLLE
Trigger: CTCCAGAAGTAGCATGGAAATGGAGGGCATCTTCAACCACAAAGACTCGCTCTCCGTCTCCAGCAATGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CAA 90 bp TCATCAATGGGCGAGGAGGAAGAGAGAAGGGAATTATCCGAAGGGTaGAAGGAAGGGCTGCTACTATCTCCCTGGTCAACAAGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: SSMGEEEERRELSEG*KEGLLLSPWSTRSE
Trigger: CTCACTCCTTGTTGACCAGGGAGATAGTAGCAGCCCTTCCTTCAACCCTTCGGATAATTCCCTTCTCTCTTCCTCCTCGCCCATTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000620511.1
ENST00000639876.2
CDS TCA 72 bp CGTCATTGCTGGAGACGGAGAGCGAGTCTTTGTGGTTaGAGATGCCCTCCATTTCCATGCTACTTCTGGAGT +
Preference number: 6 (lower is better)
Translates to: RHCWRRRASLCG*RCPPFPCYFWS
Trigger: ACTCCAGAAGTAGCATGGAAATGGAGGGCATCTTCAACCACAAAGACTCGCTCTCCGTCTCCAGCAATGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344204.9
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 72 bp TGCCACCCATGCCCCACTGATTCCTACCTTTGTGGTTaGAGATGCCCTCCATTTCCATGCTACTTCTGGAGT +
Preference number: 6 (lower is better)
Translates to: CHPCPTDSYLCG*RCPPFPCYFWS
Trigger: ACTCCAGAAGTAGCATGGAAATGGAGGGCATCTTCAACCACAAAGGTAGGAATCAGTGGGGCATGGGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509354.1
CDS TCA 72 bp GCAAAACAAAACGGAGAGTCTAACTGTGGGTACCACTaGCCCTGGCACATCTTCAGACAGACTGGAGCTGAC +
Preference number: 6 (lower is better)
Translates to: AKQNGESNCGYH*PWHIFRQTGAD
Trigger: GTCAGCTCCAGTCTGTCTGAAGATGTGCCAGGGTCAGTGGTACCCACAGTTAGACTCTCCGTTTTGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS GCA 72 bp GTCAAGTTGTTCATGGTCAAGGCTTTGTCTGCATGGTaGTGGAGGCGCTGCTCTGCAATCGTGAGATCTTCT +
Preference number: 6 (lower is better)
Translates to: VKLFMVKALSAW*WRRCSAIVRSS
Trigger: AGAAGATCTCACGATTGCAGAGCAGCGCCTCCAGCACCATGCAGACAAAGCCTTGACCATGAACAACTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp GTCAAAAGTCAAGTTGTTCATGGTCAAGGCTTTGTCTaGATGGTGCTGGAGGCGCTGCTCTGCAATCGTGAG +
Preference number: 6 (lower is better)
Translates to: VKSQVVHGQGFV*MVLEALLCNRE
Trigger: CTCACGATTGCAGAGCAGCGCCTCCAGCACCATGCAGACAAAGCCTTGACCATGAACAACTTGACTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp AGGTGGATCGTCCGCTCCTGGATGACTTCGCGGATATaGTTTATCCAGTCCTGCTTGTTCTCTATGCTGGAA +
Preference number: 6 (lower is better)
Translates to: RWIVRSWMTSRI*FIQSCLFSMLE
Trigger: TTCCAGCATAGAGAACAAGCAGGACTGGATAAAGCATATCCGCGAAGTCATCCAGGAGCGGACGATCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp CCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTaGTACTGCTGCTGCTTTCACTGCATGCCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: PCNRVSPTWWRC*YCCCFHCMPSG
Trigger: TCCTGAAGGCATGCAGTGAAAGCAGCAGCAGTAGCAACATCTCCACCATGTTGGTGACACACGATTACACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344135.5
CDS CCA 72 bp GAATCCACGTTGCTCATATACTTTTCGGCCTTCTGGTaGAAAATGGAGGACATGTCCAGCAAGGTGCTCCGC +
Preference number: 6 (lower is better)
Translates to: ESTLLIYFSAFW*KMEDMSSKVLR
Trigger: GCGGAGCACCTTGCTGGACATGTCCTCCATTTTCCACCAGAAGGCCGAAAAGTATATGAGCAACGTGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp GCACACACACCAATATTCATGGAGGAAGAACTATTCTaGTTACCACCTCGTGGGCTGGGGGTTCAAGGCACT +
Preference number: 6 (lower is better)
Translates to: AHTPIFMEEELF*LPPRGLGVQGT
Trigger: AGTGCCTTGAACCCCCAGCCCACGAGGTGGTAACCAGAATAGTTCTTCCTCCATGAATATTGGTGTGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504606.1
CDS GCA 72 bp TGGATCCAAGTTTGCCGGACACTTGGACTAGATGAATaGAAAATGAAGGTCTCTACCACGTCACCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: WIQVCRTLGLDE*KMKVSTTSPVL
Trigger: GAGGACGGGTGACGTGGTAGAGACCTTCATTTTGCATTCATCTAGTCCAAGTGTCCGGCAAACTTGGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000510281.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp ACTGCAGGTACAGTTACATCTCCACTCAACAATACCTaGCTGTTCACAGACACCCCAGATACTGTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: TAGTVTSPLNNT*LFTDTPDTVQA
Trigger: GGCCTGAACAGTATCTGGGGTGTCTGTGAACAGGCAGGTATTGTTGAGTGGAGATGTAACTGTACCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506611.1
CDS GCA 72 bp AATCGTGTGTCACCAACATGGTGGAGATGTTGCTACTaGTGCTGCTTTCACTCTGCAGAGGGACAGATGAAG +
Preference number: 6 (lower is better)
Translates to: NRVSPTWWRCCY*CCFHSAEGQMK
Trigger: CTTCATCTGTCCCTCTGCAGAGTGAAAGCAGCAGCAGTAGCAACATCTCCACCATGTTGGTGACACACGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503399.1
CDS GCA 72 bp GATTTGTTTAATGAGGTGCATATCAGCCTTCGTGAGTaGCTGCTGCTGCCAGGATGCGGACAATGGTTAAGG +
Preference number: 6 (lower is better)
Translates to: DLFNEVHISLRE*LLLPGCGQWLR
Trigger: CCTTAACCATTGTCCGCATCCTGGCAGCAGCAGGCACTCACGAAGGCTGATATGCACCTCATTAAACAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS GCA 72 bp CAGTCACTGGAGAAGCAACTGATTTGTTTAATGAGGTaGATATCAGCCTTCGTGAGTGCCTGCTGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: QSLEKQLICLMR*ISAFVSACCCQ
Trigger: CTGGCAGCAGCAGGCACTCACGAAGGCTGATATGCACCTCATTAAACAAATCAGTTGCTTCTCCAGTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS CCA 72 bp TTGCTGTTCAGGAGCTTTGATGTGCGTCACCATTCCTaGCATGTTCACGCTGTTCCTGTGCAGGTATTTCAG +
Preference number: 6 (lower is better)
Translates to: LLFRSFDVRHHS*HVHAVPVQVFQ
Trigger: CTGAAATACCTGCACAGGAACAGCGTGAACATGCCAGGAATGGTGACGCACATCAAAGCTCCTGAACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp GCAACACAGAGCAGCTTCCAAAAGTCAGACTTTCTCTaGGAGGCCTCACCATCTTGCTTTTCACGAGTTCCT +
Preference number: 6 (lower is better)
Translates to: ATQSSFQKSDFL*EASPSCFSRVP
Trigger: AGGAACTCGTGAAAAGCAAGATGGTGAGGCCTCCCAGAGAAAGTCTGACTTTTGGAAGCTGCTCTGTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CAA 72 bp CCAAAAGTCAGACTTTCTCTGGGAGGCCTCACCATCTaGCTTTTCACGAGTTCCTCAATTGCACTGACGAGC +
Preference number: 6 (lower is better)
Translates to: PKVRLSLGGLTI*LFTSSSIALTS
Trigger: GCTCGTCAGTGCAATTGAGGAACTCGTGAAAAGCAAGATGGTGAGGCCTCCCAGAGAAAGTCTGACTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS TCA 72 bp AAATGCCAGTTATTCCCAGTTTACAGGTTAGTAGGGTaGCCAGTTGTTCCAGTTTGCCCTGCCAAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: KCQLFPVYRLVG*PVVPVCPAKLS
Trigger: GCTGAGCTTGGCAGGGCAAACTGGAACAACTGGTCACCCTACTAACCTGTAAACTGGGAATAACTGGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS GCA 72 bp AATCGTGTGTCACCAACATGGTGGAGATGTTGCTACTaGTGCTGCTTTCACTCTGACATCTTGTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: NRVSPTWWRCCY*CCFHSDILSAS
Trigger: AGAGGCAGACAAGATGTCAGAGTGAAAGCAGCAGCAGTAGCAACATCTCCACCATGTTGGTGACACACGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS GCA 72 bp CCGTGTAATCGTGTGTCACCAACATGGTGGAGATGTTaGTACTGCTGCTGCTTTCACTCTGACATCTTGTCT +
Preference number: 6 (lower is better)
Translates to: PCNRVSPTWWRC*YCCCFHSDILS
Trigger: AGACAAGATGTCAGAGTGAAAGCAGCAGCAGTAGCAACATCTCCACCATGTTGGTGACACACGATTACACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512070.6
CDS GCA 72 bp CATACACTCATTAGAACAGTTCTATTCACTCACGCATaGCTTCAGGAAAGTGTTACGGGCCAGGCCATCTGC +
Preference number: 6 (lower is better)
Translates to: HTLIRTVLFTHA*LQESVTGQAIC
Trigger: GCAGATGGCCTGGCCCGTAACACTTTCCTGAAGGCATGCGTGAGTGAATAGAACTGTTCTAATGAGTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515144.5
CDS CCA 72 bp CAGTTGGGTTTCACAAGTGGGAATACCCAGACGCGGTaGATTTCATTCTACCACACTGACTCTAATTGGAGC +
Preference number: 6 (lower is better)
Translates to: QLGFTSGNTQTR*ISFYHTDSNWS
Trigger: GCTCCAATTAGAGTCAGTGTGGTAGAATGAAATCCACCGCGTCTGGGTATTCCCACTTGTGAAACCCAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CAA 90 bp GTTATTCCCAGTTTACAGGTTAGTAGGGTGACCAGTTGTTCCAGTTaGCCCTGCCAAGCTCAGCCACTTCACTGTAGAAGGAGTCAAAGT +
Preference number: 6 (lower is better)
Translates to: VIPSLQVSRVTSCSS*PCQAQPLHCRRSQS
Trigger: ACTTTGACTCCTTCTACAGTGAAGTGGCTGAGCTTGGCAGGGCAAACTGGAACAACTGGTCACCCTACTAACCTGTAAACTGGGAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513206.5
CDS CAA 90 bp TTCCAAATGCATGGGCAGCTTCACCAGAAATGGAAGTGGACACCTTaGGCTTTTGGCCAAAGTCTGAAAATCCTCTGCCTTTCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: FQMHGQLHQKWKWTP*AFGQSLKILCLSLQ
Trigger: CTGAAGAGAAAGGCAGAGGATTTTCAGACTTTGGCCAAAAGCCAAAGGTGTCCACTTCCATTTCTGGTGAAGCTGCCCATGCATTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507714.1
CDS TCA 72 bp TCATCATGTCGTTGCACCGCCTGGGTACTATGCACATaGCTTCCACAGCTCTCTCTAATTCTGATGTATCCA +
Preference number: 6 (lower is better)
Translates to: SSCRCTAWVLCT*LPQLSLILMYP
Trigger: TGGATACATCAGAATTAGAGAGAGCTGTGGAAGTCATGTGCATAGTACCCAGGCGGTGCAACGACATGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344204.9
ENST00000511019.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
ENST00000620511.1
ENST00000639876.2
CDS TCA 72 bp TTCATGGATCCAAGTTTGCCGGACACTTGGACTAGATaGATGCAAAATGAAGGTCTCTACCACGTCACCCGT +
Preference number: 6 (lower is better)
Translates to: FMDPSLPDTWTR*MQNEGLYHVTR
Trigger: ACGGGTGACGTGGTAGAGACCTTCATTTTGCATTCATCTAGTCCAAGTGTCCGGCAAACTTGGATCCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000510281.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 72 bp GGACTAAAAGAGCTGGAATTTAAACTCAGGGCCAAGTaGCTTCAGAGCTCACATGCGGAGCTCACAGTATGT +
Preference number: 6 (lower is better)
Translates to: GLKELEFKLRAK*LQSSHAELTVC
Trigger: ACATACTGTGAGCTCCGCATGTGAGCTCTGAAGTCACTTGGCCCTGAGTTTAAATTCCAGCTCTTTTAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504606.1
CDS TCA 72 bp TCTCGATGCTTTATAACTTATCCAAGGTCATGTGCATaGGTTAGACATGTGCCCTGTATGGTGCTCGGGGTG +
Preference number: 6 (lower is better)
Translates to: SRCFITYPRSCA*VRHVPCMVLGV
Trigger: CACCCCGAGCACCATACAGGGCACATGTCTAACTCATGCACATGACCTTGGATAAGTTATAAAGCATCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512303.1
CDS GCA 72 bp TGCCACTTCTTCAAAATCTTCATGACGTTTCTGCAATaGTCTGGCCCGATGAAGAGATTTCCCCACACCTGT +
Preference number: 6 (lower is better)
Translates to: CHFFKIFMTFLQ*SGPMKRFPHTC
Trigger: ACAGGTGTGGGGAAATCTCTTCATCGGGCCAGAGCATTGCAGAAACGTCATGAAGATTTTGAAGAAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp GTGACTTCAGAGCTCACATGCGGAGCTCACAGTATGTaGTACACAAGAGTGTTTGCACACACACCAATATTC +
Preference number: 6 (lower is better)
Translates to: VTSELTCGAHSM*YTRVFAHTPIF
Trigger: GAATATTGGTGTGTGTGCAAACACTCTTGTGTAGCACATACTGTGAGCTCCGCATGTGAGCTCTGAAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504606.1
CDS CAA 72 bp ACAGCATCTCCAAAGTCAGCCAGTTTGATGGTTGGCTaGGCTAAACTCTCATCCACCAGGATATTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: TASPKSASLMVG*AKLSSTRIFSG
Trigger: TCCTGAGAATATCCTGGTGGATGAGAGTTTAGCCAAGCCAACCATCAAACTGGCTGACTTTGGAGATGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508717.1
CDS CAA 90 bp CAGAGCTCACATGCGGAGCTCACAGTATGTGCTACACAAGAGTGTTaGCACACACACCAATATTCATGGAGGAAGAACTATTCTGGTTAC +
Preference number: 6 (lower is better)
Translates to: QSSHAELTVCATQEC*HTHQYSWRKNYSGY
Trigger: GTAACCAGAATAGTTCTTCCTCCATGAATATTGGTGTGTGTGCAAACACTCTTGTGTAGCACATACTGTGAGCTCCGCATGTGAGCTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504606.1
CDS TCA 72 bp GAAGTTTCACCTCTGAGCCAGGGATACTGGCTGGAATaGTATCTAGCTGGAGACTTTTACTCGATTTGTTGG +
Preference number: 6 (lower is better)
Translates to: EVSPLSQGYWLE*YLAGDFYSICW
Trigger: CCAACAAATCGAGTAAAAGTCTCCAGCTAGATATCATTCCAGCCAGTATCCCTGGCTCAGAGGTGAAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000510757.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 72 bp TCTTACCGAAGTGACAGTAAACTCACATTTAGGTCCTaGGAAATCCGGAACATGGCTTGGCCTTTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: SYRSDSKLTFRS*EIRNMAWPLWL
Trigger: CAACCACAAAGGCCAAGCCATGTTCCGGATTTCTCAGGACCTAAATGTGAGTTTACTGTCACTTCGGTAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507714.1
CDS GCA 72 bp AAGATATTTTTCACTTGCTGTTCAGGAGCTTTGATGTaGGTCACCATTCCTGGCATGTTCACGCTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: KIFFTCCSGALM*VTIPGMFTLFL
Trigger: CAGGAACAGCGTGAACATGCCAGGAATGGTGACGCACATCAAAGCTCCTGAACAGCAAGTGAAAAATATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS GCA 72 bp TCCATGTCGCTGCTGTATCTCGTCAAAATAGGACCCTaGATGTTCCAATATCAGCTGAGTAGAATCAGGCTT +
Preference number: 6 (lower is better)
Translates to: SMSLLYLVKIGP*MFQYQLSRIRL
Trigger: AAGCCTGATTCTACTCAGCTGATATTGGAACATGCAGGGTCCTATTTTGACGAGATACAGCAGCGACATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344204.9
ENST00000502490.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CCA 72 bp TTCCAAATGCATGGGCAGCTTCACCAGAAATGGAAGTaGACACCTTTGGCTTTTGGCCAAAGTCTGAAAATC +
Preference number: 6 (lower is better)
Translates to: FQMHGQLHQKWK*TPLAFGQSLKI
Trigger: GATTTTCAGACTTTGGCCAAAAGCCAAAGGTGTCCACTTCCATTTCTGGTGAAGCTGCCCATGCATTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507714.1
CDS CCA 72 bp TTGCCCCCAGCTTCTAGGAGGGAACTTGTAAGTCCTTaGAATGTTCTGCTTGATGAGAATGTCTGTTTACCT +
Preference number: 6 (lower is better)
Translates to: LPPASRRELVSP*NVLLDENVCLP
Trigger: AGGTAAACAGACATTCTCATCAAGCAGAACATTCCAAGGACTTACAAGTTCCCTCCTAGAAGCTGGGGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS CAA 90 bp CGTATCCATACATTCCCGGAGGTCTCTTACATAAGCCTTTTCAGTTaGAATGAGCTCAGCCATTATGAACTCTTTCCTGCGGGCAGATTT +
Preference number: 6 (lower is better)
Translates to: RIHTFPEVSYISLFS*NELSHYELFPAGRF
Trigger: AAATCTGCCCGCAGGAAAGAGTTCATAATGGCTGAGCTCATTCAAACTGAAAAGGCTTATGTAAGAGACCTCCGGGAATGTATGGATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CAA 72 bp ACATTCCCGGAGGTCTCTTACATAAGCCTTTTCAGTTaGAATGAGCTCAGCCATTATGAACTCTTTCCTGCG +
Preference number: 6 (lower is better)
Translates to: TFPEVSYISLFS*NELSHYELFPA
Trigger: CGCAGGAAAGAGTTCATAATGGCTGAGCTCATTCAAACTGAAAAGGCTTATGTAAGAGACCTCCGGGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CAA 72 bp CATGCGGAGCTCACAGTATGTGCTACACAAGAGTGTTaGCACACACACCAATATTCATGGAGGAAGAACTAT +
Preference number: 6 (lower is better)
Translates to: HAELTVCATQEC*HTHQYSWRKNY
Trigger: ATAGTTCTTCCTCCATGAATATTGGTGTGTGTGCAAACACTCTTGTGTAGCACATACTGTGAGCTCCGCATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504606.1
CDS CAA 72 bp CCAAAAGACGCTGCGTTGAGAAGGTTAATGATCGGCTaGCTCTTATTAGAAGACACGAACAAAGCAAGGAGT +
Preference number: 6 (lower is better)
Translates to: PKDAALRRLMIG*LLLEDTNKARS
Trigger: ACTCCTTGCTTTGTTCGTGTCTTCTAATAAGAGCAAGCCGATCATTAACCTTCTCAACGCAGCGTCTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515144.5
CDS TCA 72 bp CTGTGTAGCTGTTTAGAAACAGGCCTTTGTTGTGTGTaGTCCAGTCAAACATCTTCTCAGCATCCTGTTCAA +
Preference number: 6 (lower is better)
Translates to: LCSCLETGLCCV*SSQTSSQHPVQ
Trigger: TTGAACAGGATGCTGAGAAGATGTTTGACTGGATCACACACAACAAAGGCCTGTTTCTAAACAGCTACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000504606.1
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
CDS GCA 72 bp TTCTGCTGGTTGGAAATGGAAGAAACCAAAAGACGCTaGGTTGAGAAGGTTAATGATCGGCTTGCTCTTATT +
Preference number: 6 (lower is better)
Translates to: FCWLEMEETKRR*VEKVNDRLALI
Trigger: AATAAGAGCAAGCCGATCATTAACCTTCTCAACGCAGCGTCTTTTGGTTTCTTCCATTTCCAACCAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000515144.5
CDS CAA 72 bp CCTCATGGTCCAGTAATGCAATACCCTGTTCTCCCGTaGGAAGAGTTCATTCAAGATATTTTTCACTTGCTG +
Preference number: 6 (lower is better)
Translates to: PHGPVMQYPVLP*EEFIQDIFHLL
Trigger: CAGCAAGTGAAAAATATCTTGAATGAACTCTTCCAACGGGAGAACAGGGTATTGCATTACTGGACCATGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509967.6
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS CAA 72 bp GCTGGTTGGAAATGGAAGAAACCAAAAGACGCTGCGTaGAGAAGGTTAATGATCGGCTTGCTCTTATTAGAA +
Preference number: 6 (lower is better)
Translates to: AGWKWKKPKDAA*RRLMIGLLLLE
Trigger: TTCTAATAAGAGCAAGCCGATCATTAACCTTCTCAACGCAGCGTCTTTTGGTTTCTTCCATTTCCAACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000515144.5
CDS CAA 90 bp AGATATTCTGCTGGTTGGAAATGGAAGAAACCAAAAGACGCTGCGTaGAGAAGGTTAATGATCGGCTTGCTCTTATTAGAAGACACGAAC +
Preference number: 6 (lower is better)
Translates to: RYSAGWKWKKPKDAA*RRLMIGLLLLEDTN
Trigger: GTTCGTGTCTTCTAATAAGAGCAAGCCGATCATTAACCTTCTCAACGCAGCGTCTTTTGGTTTCTTCCATTTCCAACCAGCAGAATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344135.5
ENST00000515144.5
CDS TCA 72 bp CTCTATGCTGGAAGCCTTAAGGACAATTTTATTATCTaGAGTTGGTGTTCTCCCCACCCACAGTGCAAATTT +
Preference number: 6 (lower is better)
Translates to: LYAGSLKDNFII*SWCSPHPQCKF
Trigger: AAATTTGCACTGTGGGTGGGGAGAACACCAACTTCAGATAATAAAATTGTCCTTAAGGCTTCCAGCATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344204.9
ENST00000509354.1
ENST00000512070.6
ENST00000513206.5
ENST00000515144.5
CDS TCA 72 bp TCTGCTACTTACAACTGTCTTTTGAAGCCCCACAAATaGCTTATTGTTCTATCTTTCAGGCCACTTGGAGTG +
Preference number: 6 (lower is better)
Translates to: SATYNCLLKPHK*LIVLSFRPLGV
Trigger: CACTCCAAGTGGCCTGAAAGATAGAACAATAAGTCATTTGTGGGGCTTCAAAAGACAGTTGTAAGTAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508343.1
CDS TCA 72 bp CCCAGACACTCTGGTCTGCTACTTACAACTGTCTTTTaGAGCCCCACAAATGACTTATTGTTCTATCTTTCA +
Preference number: 6 (lower is better)
Translates to: PRHSGLLLTTVF*SPTNDLLFYLS
Trigger: TGAAAGATAGAACAATAAGTCATTTGTGGGGCTTCAAAAGACAGTTGTAAGTAGCAGACCAGAGTGTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508343.1
CDS GCA 72 bp GCCTATTTTGATCTGTGTCCTTTCATGGGAATACACTaGAAATGTGGGAATAATGGCTTTCCTGAGTTCTCT +
Preference number: 6 (lower is better)
Translates to: AYFDLCPFMGIH*KCGNNGFPEFS
Trigger: AGAGAACTCAGGAAAGCCATTATTCCCACATTTGCAGTGTATTCCCATGAAAGGACACAGATCAAAATAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515710.1
CDS TCA 72 bp TTTGAGGTAAAGTCTATTTCTCCGCAAGCATGGATATaGGCAGAAGATGGTGACTTAAAGGAAATGAAGACC +
Preference number: 6 (lower is better)
Translates to: FEVKSISPQAWI*AEDGDLKEMKT
Trigger: GGTCTTCATTTCCTTTAAGTCACCATCTTCTGCTCATATCCATGCTTGCGGAGAAATAGACTTTACCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502490.1
CDS GCA 72 bp ACTAAGGATGACACCATCAGAACAGGATATAAGCAATaGTATTGTGCTTACGTGTTTAACAAAAAGGGATCC +
Preference number: 6 (lower is better)
Translates to: TKDDTIRTGYKQ*YCAYVFNKKGS
Trigger: GGATCCCTTTTTGTTAAACACGTAAGCACAATAGCATTGCTTATATCCTGTTCTGATGGTGTCATCCTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506611.1