RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM9 (Homo sapiens)

Ensembl gene IDs: ENSG00000100505

Ensembl transcript IDs: ENST00000298355.7, ENST00000338969.9, ENST00000360392.4, ENST00000555170.1, ENST00000555933.1, ENST00000684578.1

Found 676 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGGAGAGGAACAGCGGCTCTGTGCAGAATGCAGAGCAAGTCATaGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACCTCCGGG +
Preference number: 1 (lower is better)
Translates to: GRRGTAALCRMQSKS*KHFRNVGSGGVTSG
Trigger: CCCGGAGGTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGCTGTTCCTCTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 90 bp ATAGGCTCTCTAAAGGCAGGAGAGGAACAGCGGCTCTGTGCAGAATaGAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTG +
Preference number: 1 (lower is better)
Translates to: IGSLKAGEEQRLCAE*RASHGNTSGMWAVV
Trigger: CACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGCTGTTCCTCTCCTGCCTTTAGAGAGCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 90 bp ACATACCATAGGCTCTCTAAAGGCAGGAGAGGAACAGCGGCTCTGTaGAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGC +
Preference number: 1 (lower is better)
Translates to: TYHRLSKGRRGTAAL*RMQSKSWKHFRNVG
Trigger: GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGCTGTTCCTCTCCTGCCTTTAGAGAGCCTATGGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 90 bp CTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTCTaGGTTGCATCTAGGAAAGACTCTTGGAGGGCTTTAGCAGTTAGT +
Preference number: 1 (lower is better)
Translates to: LVHTWEMRPSPARAF*VASRKDSWRALAVS
Trigger: ACTAACTGCTAAAGCCCTCCAAGAGTCTTTCCTAGATGCAACGCAGAAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 90 bp CACACCAGGGGCACATTCAGGCCTTCATTTTTCAGCTTCTTCAACTaGAGCTTATTTAGATTGTTATCAAAGGAAGCCGCCGGCCCAAGC +
Preference number: 1 (lower is better)
Translates to: HTRGTFRPSFFSFFN*SLFRLLSKEAAGPS
Trigger: GCTTGGGCCGGCGGCTTCCTTTGATAACAATCTAAATAAGCTGCAGTTGAAGAAGCTGAAAAATGAAGGCCTGAATGTGCCCCTGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CCA 90 bp CCCCACCACCCATTTGAAACACATTCAGTCATACAAATCCACGACTaGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAG +
Preference number: 1 (lower is better)
Translates to: PHHPFETHSVIQIHD*KEPRSHPQNKQVLQ
Trigger: CTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGTGGATTTGTATGACTGAATGTGTTTCAAATGGGTGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 90 bp TTTAGATTGTTATCAAAGGAAGCCGCCGGCCCAAGCCATTGGAACTaGCGATGTGGAATCTTTGGTTTGATCACATCCACATACCATAGG +
Preference number: 1 (lower is better)
Translates to: FRLLSKEAAGPSHWN*RCGIFGLITSTYHR
Trigger: CCTATGGTATGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTCCTTTGATAACAATCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CCA 90 bp GCTGTAGCTACCACATCACTGTACTCCAAATGGGAACAGGTCATGTaGGCATTTTCCCTCAGCATATCCTTCTCTTGGAATAGCATCACT +
Preference number: 1 (lower is better)
Translates to: AVATTSLYSKWEQVM*AFSLSISFSWNSIT
Trigger: AGTGATGCTATTCCAAGAGAAGGATATGCTGAGGGAAAATGCCCACATGACCTGTTCCCATTTGGAGTACAGTGATGTGGTAGCTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 90 bp TATGGAGACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTaGAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTC +
Preference number: 1 (lower is better)
Translates to: YGDKHVYPENVNAVD*NSRSPITENGSFAL
Trigger: GAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTCTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR CCA 90 bp AGCTTATTTAGATTGTTATCAAAGGAAGCCGCCGGCCCAAGCCATTaGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACATAC +
Preference number: 1 (lower is better)
Translates to: SLFRLLSKEAAGPSH*NCRCGIFGLITSTY
Trigger: GTATGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTCCTTTGATAACAATCTAAATAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CCA 90 bp AACAAGCAAGTACTACAGAGTAATTTAGAATCATCTGGGCAAAACTaGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGAG +
Preference number: 1 (lower is better)
Translates to: NKQVLQSNLESSGQN*HMMCIGGEWEPALE
Trigger: CTCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCAGATGATTCTAAATTACTCTGTAGTACTTGCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CCA 90 bp AAAGGCATTGAGTTGGTACATTTCTGGTGCTATGGCCAGAATGTGTaGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTGCCCAT +
Preference number: 1 (lower is better)
Translates to: KGIELVHFWCYGQNV*IFSIILGSLKDLAH
Trigger: ATGGGCAAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAACTCAATGCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR TCA 90 bp GCACAGATAGTATATATGGAGACAAGCATGTTTATCCTGAGAATGTaGATGCTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATG +
Preference number: 1 (lower is better)
Translates to: AQIVYMETSMFILRM*MLWTATQDLPLLRM
Trigger: CATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTCTCCATATATACTATCTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR GCA 90 bp CTGATAACACATATTAGCAACATTGCTACAAATTTCTCTCTGCTCTaGAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACAC +
Preference number: 1 (lower is better)
Translates to: LITHISNIATNFSLL*RHALHSSIKPPCTH
Trigger: GTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAGCAGAGAGAAATTTGTAGCAATGTTGCTAATATGTGTTATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CCA 90 bp GTGATTTCTTTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTaGCACCAGCCACAAATACCTCCTTGTAGGTTTAATTTCATGTGT +
Preference number: 1 (lower is better)
Translates to: VISLIKMTPQSVRML*HQPQIPPCRFNFMC
Trigger: ACACATGAAATTAAACCTACAAGGAGGTATTTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAAAGAAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR TCA 90 bp AAAGGCTTTCGTTTCTATTTAGAGGTGAAACTAGAGCTACAGAGATaGTCATTAGCCAACCATGAAGAGAATTCTAGTTTCCTATGTGCT +
Preference number: 1 (lower is better)
Translates to: KGFRFYLEVKLELQR*SLANHEENSSFLCA
Trigger: AGCACATAGGAAACTAGAATTCTCTTCATGGTTGGCTAATGATCATCTCTGTAGCTCTAGTTTCACCTCTAAATAGAAACGAAAGCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
3UTR CAA 90 bp TGGTGCCCACAGGAAGTCTCAATCCTGGTGCTGACGGCCTCCGCTTaGGGTATGAAACGGAGGCAGTCTAAGTGGGTAAGCCAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: WCPQEVSILVLTASA*GMKRRQSKWVSQEQ
Trigger: CTGCTCCTGGCTTACCCACTTAGACTGCCTCCGTTTCATACCCAAAGCGGAGGCCGTCAGCACCAGGATTGAGACTTCCTGTGGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CCA 90 bp TCCTGTTTGGTGCCCACAGGAAGTCTCAATCCTGGTGCTGACGGCCTCCGCTTTGCCGGCCCAAGCCATTaGAACTGCCGATGTGGAATC +
Preference number: 2 (lower is better)
Translates to: SCLVPTGSLNPGADGLRFAGPSH*NCRCGI
Trigger: GATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGC...AAAGCGGAGGCCGTCAGCACCAGGATTGAGACTTCCTGTGGGCACCAAACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR TCA 90 bp AGGCCATCACCAGCAAGGGCCTTCTGCGTTGCATCTAGGAAAGACTCTTGGAGGTCTCAATCCTGGTGCTaGCGGCCTCCGCTTTGGGTA +
Preference number: 2 (lower is better)
Translates to: RPSPARAFCVASRKDSWRSQSWC*RPPLWV
Trigger: TACCCAAAGCGGAGGCCGTCAGCACCAGGATTGAGA...CCTCCAAGAGTCTTTCCTAGATGCAACGCAGAAGGCCCTTGCTGGTGATGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR GCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTCACTCCTGCCAACTCTaGACCCCACCACGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSHSCQL*TPPRLA
Trigger: AGCCAGCCGTGGTGGGGTGCAGAGTTGGCAGGAGTG...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR CAA 90 bp AAGATGAAAATGGCGGGTAATGCGAAGTTGCTGGTCTCTTCCTGTTaGGTGCCCACAGGAAGTCTCAATCCTGGTGCTGACGGCCTCCGC +
Preference number: 2 (lower is better)
Translates to: KMKMAGNAKLLVSSC*VPTGSLNPGADGLR
Trigger: GCGGAGGCCGTCAGCACCAGGATTGAGACTTCCTGTGGGCACCAAACAGGAAGAGACCAGCAACTTCGCATTACCCGCCATTTTCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR TCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTACCCACCACGGCTGGCTaGGCTCCTTGCTGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: QLILPYLPLQPHCLTESLPTTAG*APCCGS
Trigger: AGAGCCACAGCAAGGAGCTCAGCCAGCCGTGGTGGG...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAGCACCCCACCACGGCTaGCTGAGCTCCTTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: QLILPYLPLQPHCLTESLAPHHG*LSSLLW
Trigger: CCACAGCAAGGAGCTCAGCCAGCCGTGGTGGGGTGC...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR CAA 90 bp GCCGCCGGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTaGATCACATCCACATACCATAGGCTCTCTAAAGGCAGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: AAGPSHWNCRCGIFG*ITSTYHRLSKGRRG
Trigger: TCCTCTCCTGCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CAA 90 bp TGGGAGTGGGAACCAAGTGACTTGGTGGGCTGTCTAGGTCCTTTGTaGGTTAGAATTGTTGGACATGGAAGCGGAAGCAGGCATGACAGC +
Preference number: 2 (lower is better)
Translates to: WEWEPSDLVGCLGPL*VRIVGHGSGSRHDS
Trigger: GCTGTCATGCCTGCTTCCGCTTCCATGTCCAACAATTCTAACCAACAAAGGACCTAGACAGCCCACCAAGTCACTTGGTTCCCACTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR TCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAGGAGTGGGAACCAAGTaGCTTGGTGGGCTGTCTAGG +
Preference number: 2 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQGVGTK*LGGLSR
Trigger: CCTAGACAGCCCACCAAGTCACTTGGTTCCCACTCC...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR CAA 90 bp AGACTGAAGGGACTGGCAAAGATGAAAATGGCGGGTAATGCGAAGTaGCTGGTCTCTTCCTGTTTGGTGCCCACAGGAAGTCTCAATCCT +
Preference number: 2 (lower is better)
Translates to: RLKGLAKMKMAGNAK*LVSSCLVPTGSLNP
Trigger: AGGATTGAGACTTCCTGTGGGCACCAAACAGGAAGAGACCAGCAACTTCGCATTACCCGCCATTTTCATCTTTGCCAGTCCCTTCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR GCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTATTTTCTCCTGGCGGTaGCAGTCCAGTAAGTCACCA +
Preference number: 2 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSIFSWR*QSSKSP
Trigger: TGGTGACTTACTGGACTGGCACCGCCAGGAGAAAAT...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR GCA 90 bp CTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACATGGGAGGAACAGCGGCTCTGTaGAGAATGCAGAGCAAGTCA +
Preference number: 2 (lower is better)
Translates to: LCRHALHSSIKPPCTHMGGTAAL*RMQSKS
Trigger: TGACTTGCTCTGCATTCTGCACAGAGCCGCTGTTCC...TCCCATGTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CCA 90 bp CTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACATGGGATGCAGAGGGAAGTTATaGAGAATCCCGGTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: LCRHALHSSIKPPCTHMGCRGKL*RIPVRW
Trigger: CCACCTCACCGGGATTCTCCATAACTTCCCTCTGCA...TCCCATGTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR TCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTGGCAAAACTGGCACATaGTGTGTATCGGTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLGKTGT*CVSVEN
Trigger: ATTCTCCACCGATACACATCATGTGCCAGTTTTGCC...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CCA 90 bp TTTCCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTCGGAGGCAGTCTAAGTaGGTAAGCCAGGAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: FPSAYPSLGIASLRLTTARRQSK*VSQEQP
Trigger: TGGCTGCTCCTGGCTTACCCACTTAGACTGCCTCCG...AGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTGTAAGAACAGGCAGCTaGCGCCTCCACGGCACATCC +
Preference number: 2 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTVRTGS*RLHGTS
Trigger: GGATGTGCCGTGGAGGCGCCAGCTGCCTGTTCTTAC...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CCA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGAATGCAGAGCAAGTCATaGAAACACTTCAGGAATGTG +
Preference number: 2 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRMQSKS*KHFRNV
Trigger: CACATTCCTGAAGTGTTTCCATGACTTGCTCTGCAT...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CCA 90 bp CTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACATGGGAGTAATGCGAAGTTGCTaGTCTCTTCCTGTTTGGTGC +
Preference number: 2 (lower is better)
Translates to: LCRHALHSSIKPPCTHMGVMRSC*SLPVWC
Trigger: GCACCAAACAGGAAGAGACCAGCAACTTCGCATTAC...TCCCATGTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CAA 90 bp TTCAGGCCTTCATTTTTCAGCTTCTTCAACTGCAGCTTATTTAGATaGTTATCAAAGGAAGCCGCCGGCCCAAGCCATTGGAACTGCCGA +
Preference number: 2 (lower is better)
Translates to: FRPSFFSFFNCSLFR*LSKEAAGPSHWNCR
Trigger: TCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTCCTTTGATAACAATCTAAATAAGCTGCAGTTGAAGAAGCTGAAAAATGAAGGCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAAGCAAAATCTGGGAGTaGGAACCAAGTGACTTGGTG +
Preference number: 2 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQSKIWE*EPSDLV
Trigger: CACCAAGTCACTTGGTTCCCACTCCCAGATTTTGCT...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTACATTTCTGGTGCTATaGCCAGAATGTGTGGATTTT +
Preference number: 2 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSTFLVL*PECVDF
Trigger: AAAATCCACACATTCTGGCCATAGCACCAGAAATGT...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CCA 90 bp TCTTTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTGGCACCAGCCACAAAACACTTCAGGAATGTaGGCAGTGGTGGGGTTACCT +
Preference number: 2 (lower is better)
Translates to: SLIKMTPQSVRMLWHQPQNTSGM*AVVGLP
Trigger: AGGTAACCCCACCACTGCCCACATTCCTGAAGTGTT...TTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR TCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATATAAGTTGCCAGTGCTaGTCCCTTTCTCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYISCQC*SLSLLL
Trigger: GAGGAGGAGAGAAAGGGATCAGCACTGGCAACTTAT...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
3UTR-3UTR GCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTTGTGGGTGTAAAGACTaGAGAGGACCAGCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSCGCKD*RGPAFL
Trigger: GAGAAAAGCTGGTCCTCTGCAGTCTTTACACCCACA...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR GCA 90 bp TCTTTGTTGGAAGAGAACTTGTTCCGTTTGTTTCATCTAGAAAATGACCCCCAGCGGCTCTGTGCAGAATaGAGAGCAAGTCATGGAAAC +
Preference number: 2 (lower is better)
Translates to: SLLEENLFRLFHLENDPQRLCAE*RASHGN
Trigger: GTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCG...CTGGGGGTCATTTTCTAGATGAAACAAACGGAACAAGTTCTCTTCCAACAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTACCGATGTGGAATCTTTaGTTTGATCACATCCACATA +
Preference number: 2 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVPMWNL*FDHIHI
Trigger: TATGTGGATGTGATCAAACCAAAGATTCCACATCGG...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR GCA 90 bp TCTTTGTTGGAAGAGAACTTGTTCCGTTTGTTTCATCTAGAAAATGACCCCCAGCCAAGCCATTGGAACTaGCGATGTGGAATCTTTGGT +
Preference number: 2 (lower is better)
Translates to: SLLEENLFRLFHLENDPQPSHWN*RCGIFG
Trigger: ACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGG...CTGGGGGTCATTTTCTAGATGAAACAAACGGAACAAGTTCTCTTCCAACAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTGAGTTGGTACATTTCTaGTGCTATGGCCAGAATGTG +
Preference number: 2 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSELVHF*CYGQNV
Trigger: CACATTCTGGCCATAGCACCAGAAATGTACCAACTC...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CCA 90 bp TGCTCTCAAACTGATAGGTCATCCCTGAGAGAAGGTGCTAAAATGATAATTCTGTGGGAACAGGTCATGTaGGCATTTTCCCTCAGCATA +
Preference number: 2 (lower is better)
Translates to: CSQTDRSSLREGAKMIILWEQVM*AFSLSI
Trigger: TATGCTGAGGGAAAATGCCCACATGACCTGTTCCCA...CAGAATTATCATTTTAGCACCTTCTCTCAGGGATGACCTATCAGTTTGAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CCA 90 bp TCTTTGTTGGAAGAGAACTTGTTCCGTTTGTTTCATCTAGAAAATGACCCCCAGTCATCTGGGCAAAACTaGCACATGATGTGTATCGGT +
Preference number: 2 (lower is better)
Translates to: SLLEENLFRLFHLENDPQSSGQN*HMMCIG
Trigger: ACCGATACACATCATGTGCCAGTTTTGCCCAGATGA...CTGGGGGTCATTTTCTAGATGAAACAAACGGAACAAGTTCTCTTCCAACAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CCA 90 bp TGCTCTCAAACTGATAGGTCATCCCTGAGAGAAGGTGCTAAAATGATAATTCTGAGTGTCAGAATGCTTTaGCACCAGCCACAAATACCT +
Preference number: 2 (lower is better)
Translates to: CSQTDRSSLREGAKMIILSVRML*HQPQIP
Trigger: AGGTATTTGTGGCTGGTGCCAAAGCATTCTGACACT...CAGAATTATCATTTTAGCACCTTCTCTCAGGGATGACCTATCAGTTTGAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR TCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGCTAGAGCTACAGAGATaGTCATTAGCCAACCATGAA +
Preference number: 2 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLLELQR*SLANHE
Trigger: TTCATGGTTGGCTAATGATCATCTCTGTAGCTCTAG...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
3UTR-3UTR CCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTGAAAAGGCATTGAGTTaGTACATTTCTGGTGCTATG +
Preference number: 2 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSEKALS*YISGAM
Trigger: CATAGCACCAGAAATGTACCAACTCAATGCCTTTTC...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR CAA 90 bp CTCACCTCTTCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTaGTTTTCATGCCAGTTGGTTAAAGGCTTTCGTTTCTATTTAGAG +
Preference number: 2 (lower is better)
Translates to: LTSSQALLSFVKSFY*FSCQLVKGFRFYLE
Trigger: CTCTAAATAGAAACGAAAGCCTTTAACCAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGAAGAGGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
3UTR-3UTR CCA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTAATAAAAGCAAAATCTaGGAGTGGGAACCAAGTGAC +
Preference number: 2 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLNKSKI*EWEPSD
Trigger: GTCACTTGGTTCCCACTCCCAGATTTTGCTTTTATT...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR CAA 90 bp GCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTaGGTTAAAGGCTTTCGTTTCTATTTAGAGGTGAAACTAGAGCTA +
Preference number: 2 (lower is better)
Translates to: ALLSFVKSFYLFSCQ*VKGFRFYLEVKLEL
Trigger: TAGCTCTAGTTTCACCTCTAAATAGAAACGAAAGCCTTTAACCAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
3UTR-3UTR CCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATATGCTTATGCTTGGCGTaGAATAAAATAAGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: MKRILVSYVLLTSLRPSICLCLA*NKISCQ
Trigger: CTGGCAACTTATTTTATTCCACGCCAAGCATAAGCA...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
3UTR-3UTR CAA 90 bp TCCTGTTTGGTGCCCACAGGAAGTCTCAATCCTGGTGCTGACGGCCTCCGCTTTCGCCGGCCCAAGCCATaGGAACTGCCGATGTGGAAT +
Preference number: 3 (lower is better)
Translates to: SCLVPTGSLNPGADGLRFRRPKP*ELPMWN
Trigger: ATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCG...AAAGCGGAGGCCGTCAGCACCAGGATTGAGACTTCCTGTGGGCACCAAACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 72 bp CGGGTAATGCGAAGTTGCTGGTCTCTTCCTGTTTGGTaGCCACAGGAAGTCTCAATCCTGGTGCTGACGGCC +
Preference number: 3 (lower is better)
Translates to: RVMRSCWSLPVW*PQEVSILVLTA
Trigger: GGCCGTCAGCACCAGGATTGAGACTTCCTGTGGGCACCAAACAGGAAGAGACCAGCAACTTCGCATTACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CCA 72 bp GAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTaGGCAGTGGTGGGGTTACCTCCGGGCTTGCCAGCC +
Preference number: 3 (lower is better)
Translates to: ECRASHGNTSGM*AVVGLPPGLPA
Trigger: GGCTGGCAAGCCCGGAGGTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CCA 72 bp GGAACAGCGGCTCTGTGCAGAATGCAGAGCAAGTCATaGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTT +
Preference number: 3 (lower is better)
Translates to: GTAALCRMQSKS*KHFRNVGSGGV
Trigger: AACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 72 bp AGGCTCTCTAAAGGCAGGAGAGGAACAGCGGCTCTGTaGAGAATGCAGAGCAAGTCATGGAAACACTTCAGG +
Preference number: 3 (lower is better)
Translates to: RLSKGRRGTAAL*RMQSKSWKHFR
Trigger: CCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGCTGTTCCTCTCCTGCCTTTAGAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 72 bp CTAAAGGCAGGAGAGGAACAGCGGCTCTGTGCAGAATaGAGAGCAAGTCATGGAAACACTTCAGGAATGTGG +
Preference number: 3 (lower is better)
Translates to: LKAGEEQRLCAE*RASHGNTSGMW
Trigger: CCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGCTGTTCCTCTCCTGCCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 72 bp ACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTCTaGGTTGCATCTAGGAAAGACTCTTGGAGGGCTTTA +
Preference number: 3 (lower is better)
Translates to: TWEMRPSPARAF*VASRKDSWRAL
Trigger: TAAAGCCCTCCAAGAGTCTTTCCTAGATGCAACGCAGAAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CAA 90 bp TCTTTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTGGCACCAGCCACAACTGACGGCCTCCGCTTaGGGTATGAAACGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SLIKMTPQSVRMLWHQPQLTASA*GMKRRQ
Trigger: CTGCCTCCGTTTCATACCCAAAGCGGAGGCCGTCAG...TTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR GCA 72 bp TTATCAAAGGAAGCCGCCGGCCCAAGCCATTGGAACTaGCGATGTGGAATCTTTGGTTTGATCACATCCACA +
Preference number: 3 (lower is better)
Translates to: LSKEAAGPSHWN*RCGIFGLITST
Trigger: TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTCCTTTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CAA 90 bp CTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACATGGGACAAGGGCCTTCTGCGTaGCATCTAGGAAAGACTCTT +
Preference number: 3 (lower is better)
Translates to: LCRHALHSSIKPPCTHMGQGPSA*HLGKTL
Trigger: AAGAGTCTTTCCTAGATGCAACGCAGAAGGCCCTTG...TCCCATGTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CCA 72 bp AGATTGTTATCAAAGGAAGCCGCCGGCCCAAGCCATTaGAACTGCCGATGTGGAATCTTTGGTTTGATCACA +
Preference number: 3 (lower is better)
Translates to: RLLSKEAAGPSH*NCRCGIFGLIT
Trigger: TGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTCCTTTGATAACAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CAA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTTGCAGCTTATTTAGATaGTTATCAAAGGAAGCCGCC +
Preference number: 3 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLCSLFR*LSKEAA
Trigger: GGCGGCTTCCTTTGATAACAATCTAAATAAGCTGCA...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CAA 90 bp TCTTTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTGGCACCAGCCACAAGCGGGTAATGCGAAGTaGCTGGTCTCTTCCTGTTTG +
Preference number: 3 (lower is better)
Translates to: SLIKMTPQSVRMLWHQPQAGNAK*LVSSCL
Trigger: CAAACAGGAAGAGACCAGCAACTTCGCATTACCCGC...TTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR TCA 72 bp CCCTCTCTAAACAGCTCTAGCACCCCACCACCCATTTaGAACACATTCAGTCATACAAATCCACGACTGGAA +
Preference number: 3 (lower is better)
Translates to: PSLNSSSTPPPI*NTFSHTNPRLE
Trigger: TTCCAGTCGTGGATTTGTATGACTGAATGTGTTTCAAATGGGTGGTGGGGTGCTAGAGCTGTTTAGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR-3UTR CAA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTATGTTGGTTAGAATTGTaGGACATGGAAGCGGAAGCA +
Preference number: 3 (lower is better)
Translates to: QLILPYLPLQPHCLTESLCWLEL*DMEAEA
Trigger: TGCTTCCGCTTCCATGTCCAACAATTCTAACCAACA...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CAA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTTGGGAACCAAGTGACTaGGTGGGCTGTCTAGGTCCT +
Preference number: 3 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTWEPSD*VGCLGP
Trigger: AGGACCTAGACAGCCCACCAAGTCACTTGGTTCCCA...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CAA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTTGTGGAATCTTTGGTTaGATCACATCCACATACCAT +
Preference number: 3 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLCGIFG*ITSTYH
Trigger: ATGGTATGTGGATGTGATCAAACCAAAGATTCCACA...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR TCA 72 bp CTAGGAAGCCTGAAAGATCTTGCCCATGAGTCTCTTTaGCCCTTGCCCATTTCCTTTCTAGTACATATGACC +
Preference number: 3 (lower is better)
Translates to: LGSLKDLAHESL*PLPISFLVHMT
Trigger: GGTCATATGTACTAGAAAGGAAATGGGCAAGGGTCAAAGAGACTCATGGGCAAGATCTTTCAGGCTTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CAA 90 bp TTTCCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTAAGTGTCAGAATGCTTaGGCACCAGCCACAAATACC +
Preference number: 3 (lower is better)
Translates to: FPSAYPSLGIASLRLTTAKCQNA*APATNT
Trigger: GGTATTTGTGGCTGGTGCCAAAGCATTCTGACACTT...AGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CCA 72 bp CCATTTGAAACACATTCAGTCATACAAATCCACGACTaGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAA +
Preference number: 3 (lower is better)
Translates to: PFETHSVIQIHD*KEPRSHPQNKQ
Trigger: TTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGTGGATTTGTATGACTGAATGTGTTTCAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CCA 72 bp GAGTTGGTACATTTCTGGTGCTATGGCCAGAATGTGTaGATTTTTAGCATCATTCTAGGAAGCCTGAAAGAT +
Preference number: 3 (lower is better)
Translates to: ELVHFWCYGQNV*IFSIILGSLKD
Trigger: ATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CAA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTTGTCTAGGTCCTTTGTaGGTTAGAATTGTTGGACAT +
Preference number: 3 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSCLGPL*VRIVGH
Trigger: ATGTCCAACAATTCTAACCAACAAAGGACCTAGACA...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CAA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAGGCTGTCTAGGTCCTTaGTTGGTTAGAATTGTTGGA +
Preference number: 3 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKGCLGP*LVRIVG
Trigger: TCCAACAATTCTAACCAACAAAGGACCTAGACAGCC...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CAA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTCCCCCTACAACCTCATaGTTTGACAGAAAGCTTAAG +
Preference number: 3 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTPPTTS*FDRKLK
Trigger: CTTAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGG...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CAA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTCTTTGTTGGTTAGAATaGTTGGACATGGAAGCGGAA +
Preference number: 3 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLLCWLE*LDMEAE
Trigger: TTCCGCTTCCATGTCCAACAATTCTAACCAACAAAG...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR-3UTR CAA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGAGAAGGTGCTTATGCTaGGCGTGGAATAAAATAAGT +
Preference number: 3 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLRRCLC*AWNKIS
Trigger: ACTTATTTTATTCCACGCCAAGCATAAGCACCTTCT...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
3UTR TCA 72 bp GTATATATGGAGACAAGCATGTTTATCCTGAGAATGTaGATGCTGTGGACTGCAACTCAAGATCTCCCATTA +
Preference number: 3 (lower is better)
Translates to: VYMETSMFILRM*MLWTATQDLPL
Trigger: TAATGGGAGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTCTCCATATATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
3UTR CCA 72 bp TTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTaGCACCAGCCACAAATACCTCCTTGTAGGTTTAAT +
Preference number: 3 (lower is better)
Translates to: LIKMTPQSVRML*HQPQIPPCRFN
Trigger: ATTAAACCTACAAGGAGGTATTTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR TCA 72 bp ATTAGACACCATAATCTTATGAACATTAAAATAAACTaGGGCGCTACATCCTCCTGCAGGATGAAACGAGAG +
Preference number: 3 (lower is better)
Translates to: IRHHNLMNIKIN*GATSSCRMKRE
Trigger: CTCTCGTTTCATCCTGCAGGAGGATGTAGCGCCTCAGTTTATTTTAATGTTCATAAGATTATGGTGTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR TCA 72 bp CGTTTCTATTTAGAGGTGAAACTAGAGCTACAGAGATaGTCATTAGCCAACCATGAAGAGAATTCTAGTTTC +
Preference number: 3 (lower is better)
Translates to: RFYLEVKLELQR*SLANHEENSSF
Trigger: GAAACTAGAATTCTCTTCATGGTTGGCTAATGATCATCTCTGTAGCTCTAGTTTCACCTCTAAATAGAAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
3UTR GCA 72 bp TTAAATAAACGAACCAAATCATTAAGTCCCCTGGTTTaGCTGTGTCTTAGAGACTTTCCAATTTTATACAGT +
Preference number: 3 (lower is better)
Translates to: LNKRTKSLSPLV*LCLRDFPILYS
Trigger: ACTGTATAAAATTGGAAAGTCTCTAAGACACAGGCAAACCAGGGGACTTAATGATTTGGTTCGTTTATTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCGCTGCAGCGGGTGCCTaGGCTGGCGAGGTGGCCGAC +
Preference number: 4 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGAAAGA*AGEVAD
Trigger: GTCGGCCACCTCGCCAGCTCAGGCACCCGCTGCAGC...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp TCCTGTTTGGTGCCCACAGGAAGTCTCAATCCTGGTGCTGACGGCCTCCGCTTTGACACTGGGGGCAGGTaGTACAGGAGTTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SCLVPTGSLNPGADGLRFDTGGR*YRSCGA
Trigger: TGCCCCGCAACTCCTGTATCACCTGCCCCCAGTGTC...AAAGCGGAGGCCGTCAGCACCAGGATTGAGACTTCCTGTGGGCACCAAACAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCGGAGACAGCGACGGCTaGAGCGGGTGCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGGDSDG*SGCLSW
Trigger: CCAGCTCAGGCACCCGCTGCAGCCGTCGCTGTCTCC...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTCGGCGGCGGCTGTGGTaGTGGTGCCTTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSRRRLW*WCLPAQ
Trigger: CTGCGCGGGAAGGCACCACCACCACAGCCGCCGCCG...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTCGGCGGCGGCTGTGGTaGTGGTGCCTTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLRRRLW*WCLPAQ
Trigger: CTGCGCGGGAAGGCACCACCACCACAGCCGCCGCCG...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CTGAAGGGACTGGCAAAGATGAAAATGGCGGGTAATGCGAAGTTGCTGGTCTCTCAGCGGCGGCGGCTGTaGTGGTGGTGCCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LKGLAKMKMAGNAKLLVSQRRRL*WWCLPA
Trigger: CGCGGGAAGGCACCACCACCACAGCCGCCGCCGCTG...AGAGACCAGCAACTTCGCATTACCCGCCATTTTCATCTTTGCCAGTCCCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp TCCTGTTTGGTGCCCACAGGAAGTCTCAATCCTGGTGCTGACGGCCTCCGCTTTAGGATGAGGCTGCGGTaGCACTGGGGGCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: SCLVPTGSLNPGADGLRFRMRLR*HWGQVI
Trigger: TATCACCTGCCCCCAGTGTCACCGCAGCCTCATCCT...AAAGCGGAGGCCGTCAGCACCAGGATTGAGACTTCCTGTGGGCACCAAACAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCCCCGGTCATCCAGGATaGGGCTGCGGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGPGHPG*GCGDTG
Trigger: CCCAGTGTCACCGCAGCCTCATCCTGGATGACCGGG...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCGCTCATGCTCCTTGTTaGCGCGGGCCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGAHAPC*RGPAAG
Trigger: CCCAGCTGCTGGCCCGCGTCAACAAGGAGCATGAGC...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTGACGGCTGCAGCGGGTaGCTGAGCTGGCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLDGCSG*LSWRGG
Trigger: GCCACCTCGCCAGCTCAGGCACCCGCTGCAGCCGTC...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp AGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACCTCCGGGCATCGGCGGGCACCGTaGACAGAGGTGGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SKSWKHFRNVGSGGVTSGHRRAP*TEVAVS
Trigger: GGAAACAGCCACCTCTGTCCACGGTGCCCGCCGATG...CCCGGAGGTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAACCCATCCCGGGAGTCTaGCGGCGCTGGCGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQPIPGV*RRWRKP
Trigger: GGGCTTGCGCCAGCGCCGTCAGACTCCCGGGATGGG...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTATCCCGCCCCGGCCCATaGGCAGCGGCCCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLSRPGP*AAAHWA
Trigger: CGCCCAATGGGCCGCTGCTCATGGGCCGGGGCGGGA...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCCGCACTGTTCGCACATaGCGGTGGCTTCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGRTVRT*RWLPWA
Trigger: CGCCCAAGGAAGCCACCGTCATGTGCGAACAGTGCG...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAACCGCGGGCGAGTGCTaGGCAGCACGGAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQTAGEC*AARRTP
Trigger: GGGCGTCCTCCGTGCTGCGCAGCACTCGCCCGCGGT...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CTGAAGGGACTGGCAAAGATGAAAATGGCGGGTAATGCGAAGTTGCTGGTCTCTCGGCTGTGGTGGTGGTaGCTTCCCGCGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: LKGLAKMKMAGNAKLLVSRLWWW*LPAQHW
Trigger: CCAGTGCTGCGCGGGAAGGCACCACCACCACAGCCG...AGAGACCAGCAACTTCGCATTACCCGCCATTTTCATCTTTGCCAGTCCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTGGAGACAGCGACGGCTaGAGCGGGTGCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSGDSDG*SGCLSW
Trigger: CCAGCTCAGGCACCCGCTGCAGCCGTCGCTGTCTCC...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTCCCCGGCGGCTGTGGTGGTaGTGCCTTCCCGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PSAYPSLGIASLRLTTAPRRLWW*CLPAQH
Trigger: GTGCTGCGCGGGAAGGCACCACCACCACAGCCGCCG...GGGAGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAACAGCGGCGGCGGCTGTaGTGGTGGTGCCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQQRRRL*WWCLPA
Trigger: CGCGGGAAGGCACCACCACCACAGCCGCCGCCGCTG...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp AGGCCATCACCAGCAAGGGCCTTCTGCGTTGCATCTAGGAAAGACTCTTGGAGGCTTCCATCTCCTCCATaGGGACCGGTCTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RPSPARAFCVASRKDSWRLPSPP*GPVWEE
Trigger: CTCCTCCCAGACCGGTCCCCATGGAGGAGATGGAAG...CCTCCAAGAGTCTTTCCTAGATGCAACGCAGAAGGCCCTTGCTGGTGATGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGACCAGTACGCGATTCTTaGGGAAGCCGCGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRPVRDS*GSRGAP
Trigger: GGGGGCTCCGCGGCTTCCCCAAGAATCGCGTACTGG...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTCCCGGTCATCCAGGATaGGGCTGCGGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSPGHPG*GCGDTG
Trigger: CCCAGTGTCACCGCAGCCTCATCCTGGATGACCGGG...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTCGCAGAGCTGGCACTTaGGGGCCGCGGCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLRRAGT*GPRLCS
Trigger: AGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGCG...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTAATCCGCTGACGCCGTaGCCTGGAGCTCCCCCATCC +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSNPLTP*PGAPPS
Trigger: GGATGGGGGAGCTCCAGGGCACGGCGTCAGCGGATT...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAACCTACCGCGGGCGAGTaGTGCGCAGCACGGAGGACG +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQPTAGE*CAARRT
Trigger: CGTCCTCCGTGCTGCGCAGCACTCGCCCGCGGTAGG...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTTGCAGGTGGAGACCTTaGGTGGGCTCAGCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSCRWRP*VGSASG
Trigger: GCCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCA...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAACGGCGGCTGTGGTGGTaGTGCCTTCCCGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQRRLWW*CLPAQH
Trigger: GTGCTGCGCGGGAAGGCACCACCACCACAGCCGCCG...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTACCTGAGCTGGCGAGGTaGCCGACGGGCCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVPELAR*PTGPSC
Trigger: ACAAGACGGGCCCGTCGGCCACCTCGCCAGCTCAGG...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTCCATGGGGACCGGTCTaGGAGGAGACAGCGACGGCT +
Preference number: 4 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLPWGPV*EETATA
Trigger: AGCCGTCGCTGTCTCCTCCCAGACCGGTCCCCATGG...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTGGTGGAGACCTTGCGTaGGCTCAGCCTCCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSGGDLA*AQPPAH
Trigger: GTGAGCCGGAGGCTGAGCCCACGCAAGGTCTCCACC...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp AGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACCTCCGGGCGGAGGCAGTCTAAGTaGGTAAGCCAGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SKSWKHFRNVGSGGVTSGRRQSK*VSQEQP
Trigger: TGGCTGCTCCTGGCTTACCCACTTAGACTGCCTCCG...CCCGGAGGTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTACGGCTGCAAGATCTCTaGAGGGGGCCGGCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLRLQDL*RGPACG
Trigger: TCCGCACGCCGGCCCCCTTCAGAGATCTTGCAGCCG...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATTCCCGCCCCGGCCCATaGGCAGCGGCCCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYSRPGP*AAAHWA
Trigger: CGCCCAATGGGCCGCTGCTCATGGGCCGGGGCGGGA...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTCCGGGCCTAGGCTTCTaGACGGCAGTGGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSPGLGF*TAVGLF
Trigger: GAAAAGCCCCACTGCCGTGCAGAAGCCTAGGCCCGG...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACATGGGATGCAGGTGGAGACCTTaGGTGGGCTCAGCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LCRHALHSSIKPPCTHMGCRWRP*VGSASG
Trigger: GCCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCA...TCCCATGTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTAGCTGACGCCGTGCCCTaGAGCTCCCCCATCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLADAVP*SSPIPG
Trigger: TCCCGGGATGGGGGAGCTCCAGGGCACGGCGTCAGC...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCTTCAATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGTCTTGTCCAGCACCCTaGCCAGCGGCGGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SSIKPPCTHMGNEAITSKSCPAP*PAAAAV
Trigger: CACAGCCGCCGCCGCTGGCCAGGGTGCTGGACAAGA...CTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGATTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp AGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACCTCCGGGGGGGGATTCAGACTCTaGGGTCTGCACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: SKSWKHFRNVGSGGVTSGGGFRL*GLHQDV
Trigger: AACATCCTGGTGCAGACCCCAGAGTCTGAATCCCCC...CCCGGAGGTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCT
56% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TCTCTGCTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACGCGGCCCGATGGCTCTaGGGGGATTCAGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLLCRHALHSSIKPPCTHAARWL*GDSDSG
Trigger: CCCAGAGTCTGAATCCCCCCAGAGCCATCGGGCCGC...GTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAACACGCGGACGCCGTTaGGGGACTTCTGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQTRGRR*GTSGTG
Trigger: CCCCGTGCCAGAAGTCCCCCAACGGCGTCCGCGTGT...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTCCCAGGGCCGGTGACAAGTaGGTGGCCGGTGGCGGCATA +
Preference number: 4 (lower is better)
Translates to: PSAYPSLGIASLRLTTAPRAGDK*VAGGGI
Trigger: TATGCCGCCACCGGCCACCCACTTGTCACCGGCCCT...GGGAGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CAA 72 bp CAGGAAGTCTCAATCCTGGTGCTGACGGCCTCCGCTTaGGGTATGAAACGGAGGCAGTCTAAGTGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: QEVSILVLTASA*GMKRRQSKWVS
Trigger: GCTTACCCACTTAGACTGCCTCCGTTTCATACCCAAAGCGGAGGCCGTCAGCACCAGGATTGAGACTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAGCTGCAGCGGGTGCCTaGGCTGGCGAGGTGGCCGAC +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRAAAGA*AGEVAD
Trigger: GTCGGCCACCTCGCCAGCTCAGGCACCCGCTGCAGC...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAGCTCATGCTCCTTGTTaGCGCGGGCCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQAHAPC*RGPAAG
Trigger: CCCAGCTGCTGGCCCGCGTCAACAAGGAGCATGAGC...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGCGGACCGCCCCTACCTaGCCTCCTAGTCCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLRTAPT*PPSPAP
Trigger: CGGGGCGGGACTAGGAGGGCAGGTAGGGGCGGTCCG...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTACGGCTGTGGTGGTGGTaGCTTCCCGCGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLRLWWW*LPAQHW
Trigger: CCAGTGCTGCGCGGGAAGGCACCACCACCACAGCCG...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTTCTGCACCAGGATGTTaGGGGCGCACGCCTGACACA +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSSAPGC*GRTPDT
Trigger: TGTGTCAGGCGTGCGCCCGCAACATCCTGGTGCAGA...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGACGGCGGCGGCTGTGGTaGTGGTGCCTTCCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRRRRLW*WCLPAQ
Trigger: CTGCGCGGGAAGGCACCACCACCACAGCCGCCGCCG...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGACAGCGGCGGCGGCTGTaGTGGTGGTGCCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRQRRRL*WWCLPA
Trigger: CGCGGGAAGGCACCACCACCACAGCCGCCGCCGCTG...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp ATCTTTGGTTTGATCACATCCACATACCATAGGCTCTCTAAAGGCAGGAGAGGAACACGCGGACGCCGTTaGGGGACTTCTGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: IFGLITSTYHRLSKGRRGTRGRR*GTSGTG
Trigger: CCCCGTGCCAGAAGTCCCCCAACGGCGTCCGCGTGT...TCCTCTCCTGCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TCTTCAATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGCAAGTGGGTGGCCGGTaGCGGCATAGCCGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SSIKPPCTHMGNEAITSKQVGGR*RHSRGK
Trigger: TTTCCCCCGGCTATGCCGCCACCGGCCACCCACTTG...CTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGATTGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAAGGGCCGGTGACAAGTaGGTGGCCGGTGGCGGCATA +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQRAGDK*VAGGGI
Trigger: TATGCCGCCACCGGCCACCCACTTGTCACCGGCCCT...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTCGTGGTCTGTGCAGGTaGAGACCTTGCGTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLRGLCR*RPCVGS
Trigger: TGAGCCCACGCAAGGTCTCCACCTGCACAGACCACG...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGAGCCTTGACTTCGTaGCTGGAGTGTTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGRALTS*LECLPS
Trigger: GGAGGGCAAACACTCCAGCCACGAAGTCAAGGCTCT...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp AGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACCTCCGGGTTCTCCTGGATCTGCTaGACCATGTTGCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SKSWKHFRNVGSGGVTSGFSWIC*TMLRSC
Trigger: ACAGCTGCGCAACATGGTCCAGCAGATCCAGGAGAA...CCCGGAGGTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp AGGCCATCACCAGCAAGGGCCTTCTGCGTTGCATCTAGGAAAGACTCTTGGAGGTTACCCTCAGACGTTTaGAGGACCAGGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RPSPARAFCVASRKDSWRLPSDV*RTRVLL
Trigger: CAGCAAGACCCTGGTCCTCCAAACGTCTGAGGGTAA...CCTCCAAGAGTCTTTCCTAGATGCAACGCAGAAGGCCCTTGCTGGTGATGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CAA 72 bp ATGGCGGGTAATGCGAAGTTGCTGGTCTCTTCCTGTTaGGTGCCCACAGGAAGTCTCAATCCTGGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: MAGNAKLLVSSC*VPTGSLNPGAD
Trigger: GTCAGCACCAGGATTGAGACTTCCTGTGGGCACCAAACAGGAAGAGACCAGCAACTTCGCATTACCCGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTGCTGCAGCGGGTGCCTaGGCTGGCGAGGTGGCCGAC +
Preference number: 4 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLAAAGA*AGEVAD
Trigger: GTCGGCCACCTCGCCAGCTCAGGCACCCGCTGCAGC...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTTTCTTTGGCCCTGTCTaGCAGTCCGTTCAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSFFGPV*QSVQRL
Trigger: CAGGCGCTGAACGGACTGTCAGACAGGGCCAAAGAA...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTTTCTTTGGCCCTGTCTaGCAGTCCGTTCAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLFFGPV*QSVQRL
Trigger: CAGGCGCTGAACGGACTGTCAGACAGGGCCAAAGAA...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAACTTCCGACCTCCGGTaGAGTCTCCCAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLTSDLR*SLPGAG
Trigger: CCCAGCTCCTGGGAGACTGCACCGGAGGTCGGAAGT...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACGGACCGCCCCTACCTaGCCTCCTAGTCCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKRTAPT*PPSPAP
Trigger: CGGGGCGGGACTAGGAGGGCAGGTAGGGGCGGTCCG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAACGGCTGTGGTGGTGGTaGCTTCCCGCGCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVERLWWW*LPAQHW
Trigger: CCAGTGCTGCGCGGGAAGGCACCACCACCACAGCCG...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAGACGGCTGCAGCGGGTaGCTGAGCTGGCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRDGCSG*LSWRGG
Trigger: GCCACCTCGCCAGCTCAGGCACCCGCTGCAGCCGTC...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAAGGAGACAGCGACGGCTaGAGCGGGTGCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEGDSDG*SGCLSW
Trigger: CCAGCTCAGGCACCCGCTGCAGCCGTCGCTGTCTCC...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTCCCCCAGCTCGTGGTCTGTaGAGGTGGAGACCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: PSAYPSLGIASLRLTTAPPARGL*RWRPCV
Trigger: CACGCAAGGTCTCCACCTGCACAGACCACGAGCTGG...GGGAGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTCGTGGCTGGAGTGTTTaGCCTCCTCCAAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLRGWSV*PPPSTG
Trigger: ACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACG...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp GAAGCCGCCGGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCGAAGACCATCCACAGTaGACATTGTCTCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: EAAGPSHWNCRCGIFGLIEDHPQ*TLSPSP
Trigger: TGGGGAAGGAGACAATGTGCACTGTGGATGGTCTTC...GATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTGCCTCCCAAAGCACCTaGCTGAGCTTTTTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSASQST*LSFFEA
Trigger: GGCCTCGAAAAAGCTCAGCCAGGTGCTTTGGGAGGC...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTGCTTCTGCACGGCAGTaGGGCTTTTCTCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSASARQ*GFSPSP
Trigger: CGGAGAAGGAGAAAAGCCCCACTGCCGTGCAGAAGC...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGCGGCGGCTGTGGTGGTaGTGCCTTCCCGCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLRRLWW*CLPAQH
Trigger: GTGCTGCGCGGGAAGGCACCACCACCACAGCCGCCG...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAACCTGAGCTGGCGAGGTaGCCGACGGGCCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEPELAR*PTGPSC
Trigger: ACAAGACGGGCCCGTCGGCCACCTCGCCAGCTCAGG...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp AGGCCATCACCAGCAAGGGCCTTCTGCGTTGCATCTAGGAAAGACTCTTGGAGGATGAGACCTGTGGTCTaGCGCAATTTCACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RPSPARAFCVASRKDSWRMRPVV*RNFTVQ
Trigger: CTGCACAGTGAAATTGCGCCAGACCACAGGTCTCAT...CCTCCAAGAGTCTTTCCTAGATGCAACGCAGAAGGCCCTTGCTGGTGATGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCTGCAGAGGGAAGTTATaGAGAATCCCGGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGCRGKL*RIPVRW
Trigger: CCACCTCACCGGGATTCTCCATAACTTCCCTCTGCA...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTTTTGGCTCCCAGCTCTaGGCTCCGCGCCCACCTACC +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSFGSQL*APRPPT
Trigger: GGTAGGTGGGCGCGGAGCTCAGAGCTGGGAGCCAAA...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAGAGAGCAGGGCAGGATaGTGGGCTCCCGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLESRAG*WAPDRR
Trigger: CCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTC...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTACGCACTGTTCGCACATaGCGGTGGCTTCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLRTVRT*RWLPWA
Trigger: CGCCCAAGGAAGCCACCGTCATGTGCGAACAGTGCG...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CACCCCACCACCCATTTGAAACACATTCAGTCATACAAATCCACGACTGGAAAGTGGCCCCCAGAGCCTTaGCTTCGTGGCTGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: HPTTHLKHIQSYKSTTGKWPPEP*LRGWSV
Trigger: AACACTCCAGCCACGAAGTCAAGGCTCTGGGGGCCA...CTTTCCAGTCGTGGATTTGTATGACTGAATGTGTTTCAAATGGGTGGTGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp TCTCTGCTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACACGCAGTTCTCGCTCTaGGGGATACTGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SLLCRHALHSSIKPPCTHTQFSL*GILLKG
Trigger: GCCCTTCAGCAGTATCCCTCAGAGCGAGAACTGCGT...GTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTGACGGCTGCAGCGGGTaGCTGAGCTGGCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTDGCSG*LSWRGG
Trigger: GCCACCTCGCCAGCTCAGGCACCCGCTGCAGCCGTC...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TCTTCAATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGTCTGCACCAGGATGTTaGGGGCGCACGCCTGACACA +
Preference number: 4 (lower is better)
Translates to: SSIKPPCTHMGNEAITSKSAPGC*GRTPDT
Trigger: TGTGTCAGGCGTGCGCCCGCAACATCCTGGTGCAGA...CTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGATTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGAACGGGCATCTTGCATTaGACGCAGTACATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRTGILH*TQYMLW
Trigger: CCACAGCATGTACTGCGTGCAATGCAAGATGCCCGT...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCTCTGCTGGACCATGTTaGGCAGCTGTACCAGAAACT +
Preference number: 4 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGSAGPC*AAVPET
Trigger: AGTTTCTGGTACAGCTGCGCAACATGGTCCAGCAGA...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTCTGTTCTCCTGGATCTaGTGGACCATGTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSLFSWI*WTMLRS
Trigger: GCTGCGCAACATGGTCCAGCAGATCCAGGAGAACAG...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTTTCAGCTTGTGCTCATaGTCCTTGTTGACGCGGGCC +
Preference number: 4 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLFSLCS*SLLTRA
Trigger: GGCCCGCGTCAACAAGGAGCATGAGCACAAGCTGAA...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp AGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACCTCCGGGGGCGCAATTTCACTGTaGAGTGAGAGATCTGATCTC +
Preference number: 4 (lower is better)
Translates to: SKSWKHFRNVGSGGVTSGGAISL*SERSDL
Trigger: GAGATCAGATCTCTCACTGCACAGTGAAATTGCGCC...CCCGGAGGTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp GAAGCCGCCGGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCTCTCTTCCTGTTTGGTaGCCACAGGAAGTCTCAATC +
Preference number: 4 (lower is better)
Translates to: EAAGPSHWNCRCGIFGLISLPVW*PQEVSI
Trigger: GATTGAGACTTCCTGTGGGCACCAAACAGGAAGAGA...GATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTACTTCTCTTCCGCTGCTaGCAGCCTTCGCAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLLLFRC*QPSQAS
Trigger: AGACGCCTGCGAAGGCTGCCAGCAGCGGAAGAGAAG...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTACAGTCTCCCAGGAGCTaGGGGCGTGAGAAACCCCTC +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLQSPRS*GREKPL
Trigger: GAGGGGTTTCTCACGCCCCCAGCTCCTGGGAGACTG...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTCTTCCCGCGCAGCACTaGCACGGACACCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSLPAQH*HGHPER
Trigger: CCTCTCTGGGTGTCCGTGCCAGTGCTGCGCGGGAAG...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTCACCGTGGACAGAGGTaGCTGTTTCCAGGACAACGT +
Preference number: 4 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLHRGQR*LFPGQR
Trigger: ACGTTGTCCTGGAAACAGCCACCTCTGTCCACGGTG...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTACCCAAAGCACCTGGCTaGGCTTTTTCGAGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLPKAPG*AFSRPA
Trigger: AGCGGGCCTCGAAAAAGCTCAGCCAGGTGCTTTGGG...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTAAGGATGAGGCTGCGGTaGCACTGGGGGCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLRMRLR*HWGQVI
Trigger: TATCACCTGCCCCCAGTGTCACCGCAGCCTCATCCT...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAACCAAGCAGTACTCCATaGGACCTGTGGTCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQPSSTP*DLWSGA
Trigger: TGCGCCAGACCACAGGTCTCATGGAGTACTGCTTGG...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTCCCTCTGAGGGATACTGCTaGAGGGCCTTACCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PSAYPSLGIASLRLTTAPSEGYC*RALPSD
Trigger: GTCTGAGGGTAAGGCCCTTCAGCAGTATCCCTCAGA...GGGAGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCGGCAAAACTGGCACATaGTGTGTATCGGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGGKTGT*CVSVEN
Trigger: ATTCTCCACCGATACACATCATGTGCCAGTTTTGCC...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACACCTCCGCTTTGGGTATaGAACGGAGGCAGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: GPSHWNCRCGIFGLITSTPPLWV*NGGSLS
Trigger: ACTTAGACTGCCTCCGTTTCATACCCAAAGCGGAGG...TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAACTTCTCGCCAGCGTTTaGGTTTGGCTCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQLLASV*VWLPAL
Trigger: CAGAGCTGGGAGCCAAACGCAAACGCTGGCGAGAAG...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGTGCAGGTGGAGACCTTaGGTGGGCTCAGCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLCRWRP*VGSASG
Trigger: GCCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCA...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTCCCAGCTGGTGGATGGATTaGAGCAGAGGGCTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: PSAYPSLGIASLRLTTAPSWWMD*SRGLLS
Trigger: GGACAACAGCCCTCTGCTGCAATCCATCCACCAGCT...GGGAGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp CTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACATGGGAGCCAGCCACTTTAGATaGCACGCAGTTCTCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LCRHALHSSIKPPCTHMGASHFR*HAVLAL
Trigger: CAGAGCGAGAACTGCGTGGCATCTAAAGTGGCTGGC...TCCCATGTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp GGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACAGGAACAGCGGCTCTGTaGAGAATGCAGAGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: GPSHWNCRCGIFGLITSTGTAAL*RMQSKS
Trigger: TGACTTGCTCTGCATTCTGCACAGAGCCGCTGTTCC...TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAGCTGCCGGAGGGGGCTaGGGCTTCTCGCCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKAAGGG*GFSPAF
Trigger: AAACGCTGGCGAGAAGCCCCAGCCCCCTCCGGCAGC...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAGATCGAAGCTCTCATTaGCCACCAGACCCGTCCGTC +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLDRSSH*PPDPSV
Trigger: GACGGACGGGTCTGGTGGCCAATGAGAGCTTCGATC...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATCTTCCCGCGCAGCACTaGCACGGACACCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYLPAQH*HGHPER
Trigger: CCTCTCTGGGTGTCCGTGCCAGTGCTGCGCGGGAAG...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAATCTTGTCCAGCACCCTaGCCAGCGGCGGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKSCPAP*PAAAAV
Trigger: CACAGCCGCCGCCGCTGGCCAGGGTGCTGGACAAGA...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTACCTGAGCTGGCGAGGTaGCCGACGGGCCCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILPELAR*PTGPSC
Trigger: ACAAGACGGGCCCGTCGGCCACCTCGCCAGCTCAGG...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAGCGGCCCGATGGCTCTaGGGGGATTCAGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRAARWL*GDSDSG
Trigger: CCCAGAGTCTGAATCCCCCCAGAGCCATCGGGCCGC...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGCCAGTACGCGATTCTTaGGGAAGCCGCGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLPVRDS*GSRGAP
Trigger: GGGGGCTCCGCGGCTTCCCCAAGAATCGCGTACTGG...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TCTTTGTTGGAAGAGAACTTGTTCCGTTTGTTTCATCTAGAAAATGACCCCCAGGGTGGAGACCTTGCGTaGGCTCAGCCTCCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SLLEENLFRLFHLENDPQGGDLA*AQPPAH
Trigger: GTGAGCCGGAGGCTGAGCCCACGCAAGGTCTCCACC...CTGGGGGTCATTTTCTAGATGAAACAAACGGAACAAGTTCTCTTCCAACAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp AATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACAGCGCCTGGGAGAGCTaGCTCTTATGTAGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: NAEQVMETLQECGQWWGYSAWES*LLCSFH
Trigger: GTGGAAACTACATAAGAGCCAGCTCTCCCAGGCGCT...GTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTGTCCGTGGTCATCCTTaGAGTGAGTGTGCCTTTACC +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSVRGHP*SECAFT
Trigger: GGTAAAGGCACACTCACTCCAAGGATGACCACGGAC...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp GGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACAAGGGGTTGCTGGGACTaGAGAGGAAGCTTTCACTTG +
Preference number: 4 (lower is better)
Translates to: GPSHWNCRCGIFGLITSTRGCWD*RGSFHL
Trigger: CAAGTGAAAGCTTCCTCTCCAGTCCCAGCAACCCCT...TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAACATCGGCGGGCACCGTaGACAGAGGTGGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEHRRAP*TEVAVS
Trigger: GGAAACAGCCACCTCTGTCCACGGTGCCCGCCGATG...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp ATCTTTGGTTTGATCACATCCACATACCATAGGCTCTCTAAAGGCAGGAGAGGACAGGAATGTGGGCAGTaGTGGGGTTACCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: IFGLITSTYHRLSKGRRGQECGQ*WGYLRA
Trigger: AGCCCGGAGGTAACCCCACCACTGCCCACATTCCTG...TCCTCTCCTGCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CAA 72 bp GGACTGGCAAAGATGAAAATGGCGGGTAATGCGAAGTaGCTGGTCTCTTCCTGTTTGGTGCCCACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GLAKMKMAGNAK*LVSSCLVPTGS
Trigger: ACTTCCTGTGGGCACCAAACAGGAAGAGACCAGCAACTTCGCATTACCCGCCATTTTCATCTTTGCCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAAGAGAGCAGGGCAGGATaGTGGGCTCCCGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEESRAG*WAPDRR
Trigger: CCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTC...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTCCCGGTCATCCAGGATaGGGCTGCGGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLPGHPG*GCGDTG
Trigger: CCCAGTGTCACCGCAGCCTCATCCTGGATGACCGGG...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTCGCAGAGCTGGCACTTaGGGGCCGCGGCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTRRAGT*GPRLCS
Trigger: AGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGCG...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAATGGCCCCCAGAGCCTTaGCTTCGTGGCTGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEWPPEP*LRGWSV
Trigger: AACACTCCAGCCACGAAGTCAAGGCTCTGGGGGCCA...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGCTCATGCTCCTTGTTaGCGCGGGCCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLAHAPC*RGPAAG
Trigger: CCCAGCTGCTGGCCCGCGTCAACAAGGAGCATGAGC...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp ATCTTTGGTTTGATCACATCCACATACCATAGGCTCTCTAAAGGCAGGAGAGGACCAAGCAGTACTCCATaGGACCTGTGGTCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: IFGLITSTYHRLSKGRRGPSSTP*DLWSGA
Trigger: TGCGCCAGACCACAGGTCTCATGGAGTACTGCTTGG...TCCTCTCCTGCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTAGGTGCACTCTTCTTATaGGGGCGTCAGAAATCTGCA +
Preference number: 4 (lower is better)
Translates to: ECRASHGNTSGMWAVVGLGALFL*GRQKSA
Trigger: TGCAGATTTCTGACGCCCTCATAAGAAGAGTGCACC...TAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAGTGCCTTTACCCCACTaGTCCTCAGTCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLVPLPH*SSVRCT
Trigger: AGTGCACCTGACTGAGGATCAGTGGGGTAAAGGCAC...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp TCTTCAATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGTGCCTTTACCCCACTaGTCCTCAGTCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: SSIKPPCTHMGNEAITSKVPLPH*SSVRCT
Trigger: AGTGCACCTGACTGAGGATCAGTGGGGTAAAGGCAC...CTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGATTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGATATGTGCTGTTGAAGTaGAGACCATCCACAGTGCAC +
Preference number: 4 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRYVLLK*RPSTVH
Trigger: GTGCACTGTGGATGGTCTTCACTTCAACAGCACATA...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTGCGAGTTGTTGTGCATaGACCAGCTCCGGTTATTGT +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSASCCA*TSSGYC
Trigger: ACAATAACCGGAGCTGGTTCATGCACAACAACTCGC...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTCGTTCCTGTTCAGGCTaGCCGCAGGGAAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSRSCSG*PQGRRG
Trigger: GCCTCTTCTTCCCTGCGGTCAGCCTGAACAGGAACG...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAGAACAAGAGGAACTATaGGTCTACCACGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQEQEEL*VYHGPA
Trigger: GGCTGGGCCGTGGTAGACTCATAGTTCCTCTTGTTC...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAGCCCTGGGCAGCCTTTaGACCGGTAGCCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRALGSL*TGSQQQ
Trigger: CTGTTGCTGGCTACCGGTTCAAAGGCTGCCCAGGGC...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTAGTGACTGGCACATGTTaGGGTTTGTGGGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVVTGTC*GLWEVG
Trigger: TCCCACTTCCCACAAACCTCAACATGTGCCAGTCAC...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTGCCCAGAGGCCTCAGTaGCGTGGTGTGAACGTGCTT +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSAQRPQ*RGVNVL
Trigger: AAGCACGTTCACACCACGGCACTGAGGCCTCTGGGC...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTCCCCTTCTCTTCCGCTaGTGGCAGCCTTCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTPLLFR*WQPSQA
Trigger: CGCCTGCGAAGGCTGCCAGCAGCGGAAGAGAAGGGG...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTGTCTTCGCTCGCGGCTaGAAGATCTCTGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSVFARG*KISEGG
Trigger: GCCCCCTTCAGAGATCTTGCAGCCGCGAGCGAAGAC...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTCCAGCTCGTGGTCTGTaGAGGTGGAGACCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSPARGL*RWRPCV
Trigger: CACGCAAGGTCTCCACCTGCACAGACCACGAGCTGG...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTATTGCACGCAGTACATaGTGTGGTTCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSIARST*CGSPAR
Trigger: ACGAGCTGGAGAACCACAGCATGTACTGCGTGCAAT...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp ATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGGGCCTTATTGCACGCAGTACATaGTGTGGTTCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: IKPPCTHMGNEAITSKGLIARST*CGSPAR
Trigger: ACGAGCTGGAGAACCACAGCATGTACTGCGTGCAAT...AAGGCCCTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTAAGCACACGGGCATCTTaGATTGCACGCAGTACATGC +
Preference number: 4 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVSTRAS*IARSTC
Trigger: GCATGTACTGCGTGCAATGCAAGATGCCCGTGTGCT...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAATTCAGCTTGTGCTCATaGTCCTTGTTGACGCGGGCC +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQFSLCS*SLLTRA
Trigger: GGCCCGCGTCAACAAGGAGCATGAGCACAAGCTGAA...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp GGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACAACCACCTTCAGCTTGTaGTCATGCTCCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: GPSHWNCRCGIFGLITSTTTFSL*SCSLLT
Trigger: CGTCAACAAGGAGCATGAGCACAAGCTGAAGGTGGT...TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAACCTTCATCACGTCCATaGGAGCCACACCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQPSSRP*EPHQRQ
Trigger: CTGCCTTTGGTGTGGCTCGCATGGACGTGATGAAGG...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTACCAGCAAGGGCCTTCTaGGTTGCATCTAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVPARAF*VASRKD
Trigger: GTCTTTCCTAGATGCAACGCAGAAGGCCCTTGCTGG...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTAGGCGCTACATCCTCCTaGAGGATGAAACGAGAGACA +
Preference number: 4 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVGATSS*RMKRET
Trigger: TGTCTCTCGTTTCATCCTGCAGGAGGATGTAGCGCC...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTACCATGGGGACCGGTCTaGGAGGAGACAGCGACGGCT +
Preference number: 4 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILPWGPV*EETATA
Trigger: AGCCGTCGCTGTCTCCTCCCAGACCGGTCCCCATGG...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAGCGGCCCGATGGCTCTaGGGGGATTCAGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKAARWL*GDSDSG
Trigger: CCCAGAGTCTGAATCCCCCCAGAGCCATCGGGCCGC...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATACACGCGGACGCCGTTaGGGGACTTCTGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNTRGRR*GTSGTG
Trigger: CCCCGTGCCAGAAGTCCCCCAACGGCGTCCGCGTGT...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACAAGTGGGTGGCCGGTaGCGGCATAGCCGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKQVGGR*RHSRGK
Trigger: TTTCCCCCGGCTATGCCGCCACCGGCCACCCACTTG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTCCAGTACGCGATTCTTaGGGAAGCCGCGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLPVRDS*GSRGAP
Trigger: GGGGGCTCCGCGGCTTCCCCAAGAATCGCGTACTGG...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp ATCTTTGGTTTGATCACATCCACATACCATAGGCTCTCTAAAGGCAGGAGAGGAACGCGGGCCAGCAGCTaGGCTTTTCTTCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: IFGLITSTYHRLSKGRRGTRASS*AFLLLR
Trigger: CCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGT...TCCTCTCCTGCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTAACGAAATCCAGCTGGTaGATGGATTGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVTKSSW*MDCSRG
Trigger: CCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGT...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTTGCACGAAATCCAGCTaGTGGATGGATTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSCTKSS*WMDCSR
Trigger: TCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCA...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTGTAGCGCTGTTGTTGTaGGTACAACATTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSVALLL*VQHSSS
Trigger: GCTGGAGGAATGTTGTACCCACAACAACAGCGCTAC...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp AATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACGTAGCGCTGTTGTTGTaGGTACAACATTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NAEQVMETLQECGQWWGYVALLL*VQHSSS
Trigger: GCTGGAGGAATGTTGTACCCACAACAACAGCGCTAC...GTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTAGCCACCTCAGACGTTTaGAGGACCAGGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLATSDV*RTRVLL
Trigger: CAGCAAGACCCTGGTCCTCCAAACGTCTGAGGTGGC...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTAGTAGTGGATGCCCTTaGAGAAGCCAGTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSSSGCP*RSQSSL
Trigger: TAGGGAAGACTGGCTTCTCCAAGGGCATCCACTACT...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAGCACCCCACCACGGCTaGCTGAGCTCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKAPHHG*LSSLLW
Trigger: CCACAGCAAGGAGCTCAGCCAGCCGTGGTGGGGTGC...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTCCCTGTATCGGTGGAGAATaGGAGCCTGCTCTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PSAYPSLGIASLRLTTAPCIGGE*EPALEP
Trigger: AGGCTCTAGAGCAGGCTCCCATTCTCCACCGATACA...GGGAGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CAA 72 bp GAACCAAGTGACTTGGTGGGCTGTCTAGGTCCTTTGTaGGTTAGAATTGTTGGACATGGAAGCGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: EPSDLVGCLGPL*VRIVGHGSGSR
Trigger: CCTGCTTCCGCTTCCATGTCCAACAATTCTAACCAACAAAGGACCTAGACAGCCCACCAAGTCACTTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTGACACTGGGGGCAGGTaGTACAGGAGTTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTDTGGR*YRSCGA
Trigger: TGCCCCGCAACTCCTGTATCACCTGCCCCCAGTGTC...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGAGGATGAGGCTGCGGTaGCACTGGGGGCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLRMRLR*HWGQVI
Trigger: TATCACCTGCCCCCAGTGTCACCGCAGCCTCATCCT...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAACCAAGCAGTACTCCATaGGACCTGTGGTCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEPSSTP*DLWSGA
Trigger: TGCGCCAGACCACAGGTCTCATGGAGTACTGCTTGG...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TCTTCAATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGTGGTCATCCTTGGAGTaGGTGTGCCTTTACCCCACT +
Preference number: 4 (lower is better)
Translates to: SSIKPPCTHMGNEAITSKWSSLE*VCLYPT
Trigger: AGTGGGGTAAAGGCACACTCACTCCAAGGATGACCA...CTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGATTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTTATGTGCTGTTGAAGTaGAGACCATCCACAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSYVLLK*RPSTVH
Trigger: GTGCACTGTGGATGGTCTTCACTTCAACAGCACATA...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTACATAGCGATCTACCGTaGGCTCCCAGTAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLHSDLP*APSSGC
Trigger: GCATCCACTACTGGGAGCTCACGGTAGATCGCTATG...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATCGTTCCTGTTCAGGCTaGCCGCAGGGAAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYRSCSG*PQGRRG
Trigger: GCCTCTTCTTCCCTGCGGTCAGCCTGAACAGGAACG...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTAAGATCTCCCATTACTaGGAATGGGTCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSKISHY*EWVLCP
Trigger: AGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTT...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTCAGAAAATTAGGCTGTaGATGGCAGCAGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSQKIRL*MAAEWM
Trigger: CATCCACTCTGCTGCCATTCACAGCCTAATTTTCTG...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TGCTCTCAAACTGATAGGTCATCCCTGAGAGAAGGTGCTAAAATGATAATTCTGTCAGACTCTGGGGTCTaGACCAGGATGTTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: CSQTDRSSLREGAKMIILSDSGV*TRMLRA
Trigger: CGCCCGCAACATCCTGGTGCAGACCCCAGAGTCTGA...CAGAATTATCATTTTAGCACCTTCTCTCAGGGATGACCTATCAGTTTGAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAACGGGCATCTTGCATTaGACGCAGTACATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLTGILH*TQYMLW
Trigger: CCACAGCATGTACTGCGTGCAATGCAAGATGCCCGT...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TCTCTGCTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACGAGGAAGCTTTCACTTaGACGAAATCCAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLLCRHALHSSIKPPCTHEEAFT*TKSSWW
Trigger: CCACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTC...GTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAGCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTGTGTGCAGCGTGACCTaGACGTTCCTGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSVCSVT*TFLFRL
Trigger: CAGCCTGAACAGGAACGTGCAGGTCACGCTGCACAC...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTGGGAGCCCGGTGTaGAGCGTGACCTGCACGTTC +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKTGSPV*SVTCTF
Trigger: GAACGTGCAGGTCACGCTGCACACCGGGCTCCCAGT...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTCACTCCTGCCAACTCTaGACCCCACCACGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTHSCQL*TPPRLA
Trigger: AGCCAGCCGTGGTGGGGTGCAGAGTTGGCAGGAGTG...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACATGGGACGGCTCTGTGCAGAATaGAGAGCAAGTCATGGAAAC +
Preference number: 4 (lower is better)
Translates to: LCRHALHSSIKPPCTHMGRLCAE*RASHGN
Trigger: GTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCG...TCCCATGTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTACGGGTAATGCGAAGTTaGTGGTCTCTTCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVRVMRS*WSLPVW
Trigger: CCAAACAGGAAGAGACCAGCAACTTCGCATTACCCG...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTGAGGCCTCAGTGCCGTaGTGTGAACGTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSEASVP*CERASF
Trigger: GAAGGAAGCACGTTCACACCACGGCACTGAGGCCTC...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTACCCTGGCGACACTCTTaGCTTCTTTCATCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLPWRHS*LLSSCV
Trigger: GACGCAGGATGAAAGAAGCCAAGAGTGTCGCCAGGG...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATATCTTGTCCAGCACCCTaGCCAGCGGCGGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSISCPAP*PAAAAV
Trigger: CACAGCCGCCGCCGCTGGCCAGGGTGCTGGACAAGA...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATCCATGGGGACCGGTCTaGGAGGAGACAGCGACGGCT +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNPWGPV*EETATA
Trigger: AGCCGTCGCTGTCTCCTCCCAGACCGGTCCCCATGG...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGCTTCCATCTCCTCCATaGGGACCGGTCTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLLPSPP*GPVWEE
Trigger: CTCCTCCCAGACCGGTCCCCATGGAGGAGATGGAAG...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTAGGGGGATTCAGACTCTaGGGTCTGCACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLGGFRL*GLHQDV
Trigger: AACATCCTGGTGCAGACCCCAGAGTCTGAATCCCCC...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAAGCGCCTGGGAGAGCTaGCTCTTATGTAGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLSAWES*LLCSFH
Trigger: GTGGAAACTACATAAGAGCCAGCTCTCCCAGGCGCT...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CACCCCACCACCCATTTGAAACACATTCAGTCATACAAATCCACGACTGGAAAGACTCCTTGGCTTCTTTaGCCCTGTCTGACAGTCCGT +
Preference number: 4 (lower is better)
Translates to: HPTTHLKHIQSYKSTTGKTPWLL*PCLTVR
Trigger: ACGGACTGTCAGACAGGGCCAAAGAAGCCAAGGAGT...CTTTCCAGTCGTGGATTTGTATGACTGAATGTGTTTCAAATGGGTGGTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAATTCTCCTGGATCTGCTaGACCATGTTGCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQFSWIC*TMLRSC
Trigger: ACAGCTGCGCAACATGGTCCAGCAGATCCAGGAGAA...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACATCGGCGGGCACCGTaGACAGAGGTGGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKHRRAP*TEVAVS
Trigger: GGAAACAGCCACCTCTGTCCACGGTGCCCGCCGATG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAGTAGAAGTCGGGGACTaGGAGCCCGGTGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKVEVGD*EPGVQR
Trigger: ACGCTGCACACCGGGCTCCCAGTCCCCGACTTCTAC...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TGCTCTCAAACTGATAGGTCATCCCTGAGAGAAGGTGCTAAAATGATAATTCTGGAATGTGGGCAGTGGTaGGGTTACCTCCGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: CSQTDRSSLREGAKMIILECGQW*GYLRAC
Trigger: GCAAGCCCGGAGGTAACCCCACCACTGCCCACATTC...CAGAATTATCATTTTAGCACCTTCTCTCAGGGATGACCTATCAGTTTGAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTAAACACTTCAGGAATGTaGGCAGTGGTGGGGTTACCT +
Preference number: 4 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVNTSGM*AVVGLP
Trigger: AGGTAACCCCACCACTGCCCACATTCCTGAAGTGTT...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TCTTTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTGGCACCAGCCACAAGCCGGCCCAAGCCATTaGAACTGCCGATGTGGAATC +
Preference number: 4 (lower is better)
Translates to: SLIKMTPQSVRMLWHQPQAGPSH*NCRCGI
Trigger: GATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGC...TTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGATCATCTGGGCAAAACTaGCACATGATGTGTATCGGT +
Preference number: 4 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRSSGQN*HMMCIG
Trigger: ACCGATACACATCATGTGCCAGTTTTGCCCAGATGA...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp GAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTAGTAATGCGAAGTTGCTaGTCTCTTCCTGTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ECRASHGNTSGMWAVVGLVMRSC*SLPVWC
Trigger: GCACCAAACAGGAAGAGACCAGCAACTTCGCATTAC...TAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACTCAGTGCCGTGGTGTaGACGTGCTTCCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKLSAVV*TCFLPR
Trigger: CCGTGGAAGGAAGCACGTTCACACCACGGCACTGAG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GAAAATGTTAAAAGCCTCAGAGGTTATATCTGGCCATCAAATTCAAGCCTCTCAGAGAGCAGGGCAGGATaGTGGGCTCCCGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: ENVKSLRGYIWPSNSSLSESRAG*WAPDRR
Trigger: CCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTC...TGAGAGGCTTGAATTTGATGGCCAGATATAACCTCTGAGGCTTTTAACATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATGACACTGGGGGCAGGTaGTACAGGAGTTGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNDTGGR*YRSCGA
Trigger: TGCCCCGCAACTCCTGTATCACCTGCCCCCAGTGTC...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATACGCAGAGCTGGCACTTaGGGGCCGCGGCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIRRAGT*GPRLCS
Trigger: AGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGCG...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTTGGCCCCCAGAGCCTTaGCTTCGTGGCTGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTWPPEP*LRGWSV
Trigger: AACACTCCAGCCACGAAGTCAAGGCTCTGGGGGCCA...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTACATCCTTAGGCTATTaGTGCTCTGCTGGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSTSLGY*CSAGVE
Trigger: TTCTACTCCAGCAGAGCATCAATAGCCTAAGGATGT...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACAACCCCACCACCCATTTaGAACACATTCAGTCATACA +
Preference number: 4 (lower is better)
Translates to: GPSHWNCRCGIFGLITSTTPPPI*NTFSHT
Trigger: TGTATGACTGAATGTGTTTCAAATGGGTGGTGGGGT...TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAATCAGACTCTGGGGTCTaGACCAGGATGTTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKSDSGV*TRMLRA
Trigger: CGCCCGCAACATCCTGGTGCAGACCCCAGAGTCTGA...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTCCAGCTCGTGGTCTGTaGAGGTGGAGACCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLPARGL*RWRPCV
Trigger: CACGCAAGGTCTCCACCTGCACAGACCACGAGCTGG...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAATCTGCTGGACCATGTTaGGCAGCTGTACCAGAAACT +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQSAGPC*AAVPET
Trigger: AGTTTCTGGTACAGCTGCGCAACATGGTCCAGCAGA...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAACTGTTCTCCTGGATCTaGTGGACCATGTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVELFSWI*WTMLRS
Trigger: GCTGCGCAACATGGTCCAGCAGATCCAGGAGAACAG...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAATTCAGCTTGTGCTCATaGTCCTTGTTGACGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEFSLCS*SLLTRA
Trigger: GGCCCGCGTCAACAAGGAGCATGAGCACAAGCTGAA...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAACCACCTTCAGCTTGTaGTCATGCTCCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLTTFSL*SCSLLT
Trigger: CGTCAACAAGGAGCATGAGCACAAGCTGAAGGTGGT...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAGAAGACCATCCACAGTaGACATTGTCTCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLEDHPQ*TLSPSP
Trigger: TGGGGAAGGAGACAATGTGCACTGTGGATGGTCTTC...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTGCTCCCAGTAGTGGATaGCCTTGGAGAAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSAPSSG*PWRSQS
Trigger: AGACTGGCTTCTCCAAGGGCATCCACTACTGGGAGC...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATGGCAGGGTGCTTACCTaGACGTTCCTGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYGRVLT*TFLFRL
Trigger: CAGCCTGAACAGGAACGTGCAGGTAAGCACCCTGCC...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTACCAAGCCATTGGAACTaGCGATGTGGAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVPSHWN*RCGIFG
Trigger: ACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGG...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACGCTGGCGCAAGCCCTaGCGACACTCTTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKRWRKP*RHSWLL
Trigger: AAGAAGCCAAGAGTGTCGCCAGGGCTTGCGCCAGCG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTGCCAGCGTTTGCGTTTaGCTCCCAGCTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTASVCV*LPALSS
Trigger: GGAGCTCAGAGCTGGGAGCCAAACGCAAACGCTGGC...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGGATCGAAGCTCTCATTaGCCACCAGACCCGTCCGTC +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLDRSSH*PPDPSV
Trigger: GACGGACGGGTCTGGTGGCCAATGAGAGCTTCGATC...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACTTCCATCTCCTCCATaGGGACCGGTCTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKLPSPP*GPVWEE
Trigger: CTCCTCCCAGACCGGTCCCCATGGAGGAGATGGAAG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATACAAGTGGGTGGCCGGTaGCGGCATAGCCGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIQVGGR*RHSRGK
Trigger: TTTCCCCCGGCTATGCCGCCACCGGCCACCCACTTG...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAGGGCCGGTGACAAGTaGGTGGCCGGTGGCGGCATA +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIRAGDK*VAGGGI
Trigger: TATGCCGCCACCGGCCACCCACTTGTCACCGGCCCT...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAGGTGGAGACCTTGCGTaGGCTCAGCCTCCGGCTCAC +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIGGDLA*AQPPAH
Trigger: GTGAGCCGGAGGCTGAGCCCACGCAAGGTCTCCACC...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACGTGGTCTGTGCAGGTaGAGACCTTGCGTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKRGLCR*RPCVGS
Trigger: TGAGCCCACGCAAGGTCTCCACCTGCACAGACCACG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTAGAGCCTTGACTTCGTaGCTGGAGTGTTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSRALTS*LECLPS
Trigger: GGAGGGCAAACACTCCAGCCACGAAGTCAAGGCTCT...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAAAGAGCCTTGACTTCGTaGCTGGAGTGTTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVERALTS*LECLPS
Trigger: GGAGGGCAAACACTCCAGCCACGAAGTCAAGGCTCT...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTCACCGTGGACAGAGGTaGCTGTTTCCAGGACAACGT +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSHRGQR*LFPGQR
Trigger: ACGTTGTCCTGGAAACAGCCACCTCTGTCCACGGTG...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAACTATTGATGCTCTGCTaGAGTAGAAGTCGGGGACTG +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQLLMLC*SRSRGL
Trigger: CAGTCCCCGACTTCTACTCCAGCAGAGCATCAATAG...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGTAAGAACAGGCAGCTaGCGCCTCCACGGCACATCC +
Preference number: 4 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILVRTGS*RLHGTS
Trigger: GGATGTGCCGTGGAGGCGCCAGCTGCCTGTTCTTAC...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAATGGATTGAACGGCCCTaGGCAGCCTTTGAACCGGTA +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEWIERP*AAFEPV
Trigger: TACCGGTTCAAAGGCTGCCCAGGGCCGTTCAATCCA...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGATTGGAACTGCCGATGTaGAATCTTTGGTTTGATCAC +
Preference number: 4 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRLELPM*NLWFDH
Trigger: GTGATCAAACCAAAGATTCCACATCGGCAGTTCCAA...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATACGCACTGTTCGCACATaGCGGTGGCTTCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIRTVRT*RWLPWA
Trigger: CGCCCAAGGAAGCCACCGTCATGTGCGAACAGTGCG...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTTTCTTTGGCCCTGTCTaGCAGTCCGTTCAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLFFGPV*QSVQRL
Trigger: CAGGCGCTGAACGGACTGTCAGACAGGGCCAAAGAA...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTAGGTGCACTCTTCTTATaGGGGCGTCAGAAATCTGCA +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLGALFL*GRQKSA
Trigger: TGCAGATTTCTGACGCCCTCATAAGAAGAGTGCACC...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTTGGTCATCCTTGGAGTaGGTGTGCCTTTACCCCACT +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSWSSLE*VCLYPT
Trigger: AGTGGGGTAAAGGCACACTCACTCCAAGGATGACCA...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATTACACCTCCCGGAATTaGCCACCGTTGCCATCATCC +
Preference number: 4 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYYTSRN*PPLPSS
Trigger: GGATGATGGCAACGGTGGTCAATTCCGGGAGGTGTA...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTATGTCATTGGAGAGGATaGTGTCCGAGTGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILCHWRG*CPSAPS
Trigger: GCTCGGCGCACTCGGACATCATCCTCTCCAATGACA...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTGGAGTGGGAACCAAGTaGCTTGGTGGGCTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTGVGTK*LGGLSR
Trigger: CCTAGACAGCCCACCAAGTCACTTGGTTCCCACTCC...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTCCACGGCCCAGCCATTaGGTCTCATTGGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSPRPSH*VSLESK
Trigger: TTTACTCTCCAATGAGACTCAATGGCTGGGCCGTGG...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GAAAATGTTAAAAGCCTCAGAGGTTATATCTGGCCATCAAATTCAAGCCTCTCATCTCAATCCTGGTGCTaGCGGCCTCCGCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: ENVKSLRGYIWPSNSSLSSQSWC*RPPLWV
Trigger: TACCCAAAGCGGAGGCCGTCAGCACCAGGATTGAGA...TGAGAGGCTTGAATTTGATGGCCAGATATAACCTCTGAGGCTTTTAACATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp ATCTTTGGTTTGATCACATCCACATACCATAGGCTCTCTAAAGGCAGGAGAGGACATCCTCCTGCAGGATaGAACGAGAGACATAAGTGC +
Preference number: 4 (lower is better)
Translates to: IFGLITSTYHRLSKGRRGHPPAG*NERHKC
Trigger: GCACTTATGTCTCTCGTTTCATCCTGCAGGAGGATG...TCCTCTCCTGCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACAAACATTAAAATAAACTaGGGCGCTACATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GPSHWNCRCGIFGLITSTNIKIN*GATSSC
Trigger: GCAGGAGGATGTAGCGCCTCAGTTTATTTTAATGTT...TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATTCAGACTCTGGGGTCTaGACCAGGATGTTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNSDSGV*TRMLRA
Trigger: CGCCCGCAACATCCTGGTGCAGACCCCAGAGTCTGA...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTCGTGGCTGGAGTGTTTaGCCTCCTCCAAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLRGWSV*PPPSTG
Trigger: ACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACG...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TGCTCTCAAACTGATAGGTCATCCCTGAGAGAAGGTGCTAAAATGATAATTCTGCTGTTCTCCTGGATCTaGTGGACCATGTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: CSQTDRSSLREGAKMIILLFSWI*WTMLRS
Trigger: GCTGCGCAACATGGTCCAGCAGATCCAGGAGAACAG...CAGAATTATCATTTTAGCACCTTCTCTCAGGGATGACCTATCAGTTTGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGAGCTGGTGGATGGATTaGAGCAGAGGGCTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLSWWMD*SRGLLS
Trigger: GGACAACAGCCCTCTGCTGCAATCCATCCACCAGCT...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAAGGATGATGTCCGAGTaGGCCGAGCCAGGGTCGAAA +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKRMMSE*AEPGSK
Trigger: TTTCGACCCTGGCTCGGCGCACTCGGACATCATCCT...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACATGGGAAATTTCTCTCTGCTCTaGAGGCATGCACTTCACTCT +
Preference number: 4 (lower is better)
Translates to: LCRHALHSSIKPPCTHMGNFSLL*RHALHS
Trigger: AGAGTGAAGTGCATGCCTGCAGAGCAGAGAGAAATT...TCCCATGTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTGACATGAGATTCAACTaGGTAACCGATGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSDMRFN*VTDGNG
Trigger: ACCATTTCCATCGGTTACCCAGTTGAATCTCATGTC...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATCGTGGTCTGTGCAGGTaGAGACCTTGCGTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNRGLCR*RPCVGS
Trigger: TGAGCCCACGCAAGGTCTCCACCTGCACAGACCACG...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTACGCGGGCCAGCAGCTaGGCTTTTCTTCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTTRASS*AFLLLR
Trigger: CCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGT...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTACGCGGGCCAGCAGCTaGGCTTTTCTTCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLTRASS*AFLLLR
Trigger: CCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGT...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGCACCGTGGACAGAGGTaGCTGTTTCCAGGACAACGT +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLHRGQR*LFPGQR
Trigger: ACGTTGTCCTGGAAACAGCCACCTCTGTCCACGGTG...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAGTGTCCTCAGACGTTTaGAGGACCAGGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRVSSDV*RTRVLL
Trigger: CAGCAAGACCCTGGTCCTCCAAACGTCTGAGGACAC...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp ACGACTGGAAAGAACCTAGGTCCCACCCTCAGAACAAGCAAGTACTACAGAGTAATACAAATCCACGACTaGAAAGAACCTAGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TTGKNLGPTLRTSKYYRVIQIHD*KEPRSH
Trigger: GTGGGACCTAGGTTCTTTCCAGTCGTGGATTTGTAT...TACTCTGTAGTACTTGCTTGTTCTGAGGGTGGGACCTAGGTTCTTTCCAGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CAA 72 bp CCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTaGATCACATCCACATACCATAGGCTCTCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: PSHWNCRCGIFG*ITSTYHRLSKG
Trigger: GCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGTGGTCATCCTTGGAGTaGGTGTGCCTTTACCCCACT +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLWSSLE*VCLYPT
Trigger: AGTGGGGTAAAGGCACACTCACTCCAAGGATGACCA...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTATACACCTCCCGGAATTaGCCACCGTTGCCATCATCC +
Preference number: 4 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILYTSRN*PPLPSS
Trigger: GGATGATGGCAACGGTGGTCAATTCCGGGAGGTGTA...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GAAAATGTTAAAAGCCTCAGAGGTTATATCTGGCCATCAAATTCAAGCCTCTCATACACCTCCCGGAATTaGCCACCGTTGCCATCATCC +
Preference number: 4 (lower is better)
Translates to: ENVKSLRGYIWPSNSSLSYTSRN*PPLPSS
Trigger: GGATGATGGCAACGGTGGTCAATTCCGGGAGGTGTA...TGAGAGGCTTGAATTTGATGGCCAGATATAACCTCTGAGGCTTTTAACATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTCATAGCGATCTACCGTaGGCTCCCAGTAGTGGATGC +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLHSDLP*APSSGC
Trigger: GCATCCACTACTGGGAGCTCACGGTAGATCGCTATG...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGTTGTGGCCCCTTTTGTaGTCCCTCCCTCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLLWPLL*SLPQFC
Trigger: ACAGAACTGAGGGAGGGATCACAAAAGGGGCCACAA...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATGCTCAGCTGGTGGGGTaGGGATCGGAAATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYAQLVG*GSEIKV
Trigger: TACTTTGATTTCCGATCCTCACCCCACCAGCTGAGC...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATTCTCTTCGGTTGGATTaGACGGCCCTGGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNSLRLD*TALGSL
Trigger: AAGGCTGCCCAGGGCCGTTCAATCCAACCGAAGAGA...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp AATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACTTCAAGCCTCTCATCTaGGACACATTACTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: NAEQVMETLQECGQWWGYFKPLI*DTLLVF
Trigger: AAAGACAAGTAATGTGTCTCAGATGAGAGGCTTGAA...GTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTAGTTAGTATGGTATTTTaGGAAAAGAGGCAACTGCTC +
Preference number: 4 (lower is better)
Translates to: ECRASHGNTSGMWAVVGLVSMVF*EKRQLL
Trigger: GAGCAGTTGCCTCTTTTCTCAAAATACCATACTAAC...TAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATATCTGCACCAGGATGTTaGGGGCGCACGCCTGACACA +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSISAPGC*GRTPDT
Trigger: TGTGTCAGGCGTGCGCCCGCAACATCCTGGTGCAGA...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATCGTGGCTGGAGTGTTTaGCCTCCTCCAAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNRGWSV*PPPSTG
Trigger: ACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACG...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAAGCTGGTGGATGGATTaGAGCAGAGGGCTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKSWWMD*SRGLLS
Trigger: GGACAACAGCCCTCTGCTGCAATCCATCCACCAGCT...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATAGGATGATGTCCGAGTaGGCCGAGCCAGGGTCGAAA +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNRMMSE*AEPGSK
Trigger: TTTCGACCCTGGCTCGGCGCACTCGGACATCATCCT...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAGCTGGGACTTTCACTTaGACGAAATCCAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRAGTFT*TKSSWW
Trigger: CCACCAGCTGGATTTCGTGCAAGTGAAAGTCCCAGC...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTTTTTTCGAGGCCCGCTaGGCCTTTGGTTCGGTTGAG +
Preference number: 4 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLFFEAR*AFGSVE
Trigger: CTCAACCGAACCAAAGGCCCAGCGGGCCTCGAAAAA...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGGGGATTCAGACTCTaGGGTCTGCACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLGGFRL*GLHQDV
Trigger: AACATCCTGGTGCAGACCCCAGAGTCTGAATCCCCC...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGAGCGCCTGGGAGAGCTaGCTCTTATGTAGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLSAWES*LLCSFH
Trigger: GTGGAAACTACATAAGAGCCAGCTCTCCCAGGCGCT...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATTTCTCCTGGATCTGCTaGACCATGTTGCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYFSWIC*TMLRSC
Trigger: ACAGCTGCGCAACATGGTCCAGCAGATCCAGGAGAA...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TTTCCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTTCCACACTGTTCTCCTaGATCTGCTGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: FPSAYPSLGIASLRLTTASTLFS*ICWTML
Trigger: CAACATGGTCCAGCAGATCCAGGAGAACAGTGTGGA...AGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGGTCCGTGGTCATCCTTaGAGTGAGTGTGCCTTTACC +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLVRGHP*SECAFT
Trigger: GGTAAAGGCACACTCACTCCAAGGATGACCACGGAC...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGACGAAATCCAGCTGGTaGATGGATTGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLTKSSW*MDCSRG
Trigger: CCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGT...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAGAGTTGGTACATTTCTaGTGCTATGGCCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLELVHF*CYGQNV
Trigger: CACATTCTGGCCATAGCACCAGAAATGTACCAACTC...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATTGCAAGCTCAGCTGGTaGGGTGAGGATCGGAAATCA +
Preference number: 4 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYCKLSW*GEDRKS
Trigger: TGATTTCCGATCCTCACCCCACCAGCTGAGCTTGCA...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTTTCCCTCTCTTCGGTTaGATTGAACGGCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLFPLFG*IERPWA
Trigger: TGCCCAGGGCCGTTCAATCCAACCGAAGAGAGGGAA...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGAGTACAGTTTCTTTGTTaGAAGAGAACTTGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRVQFLC*KRTCSV
Trigger: AACGGAACAAGTTCTCTTCCAACAAAGAAACTGTAC...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATGTGCCTTTACCCCACTaGTCCTCAGTCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNVPLPH*SSVRCT
Trigger: AGTGCACCTGACTGAGGATCAGTGGGGTAAAGGCAC...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATATGTCATTGGAGAGGATaGTGTCCGAGTGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSICHWRG*CPSAPS
Trigger: GCTCGGCGCACTCGGACATCATCCTCTCCAATGACA...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTTTGTGGCCCCTTTTGTaGTCCCTCCCTCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLLWPLL*SLPQFC
Trigger: ACAGAACTGAGGGAGGGATCACAAAAGGGGCCACAA...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTACAAGCATGTTTATCCTaGGAATGTGAATGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLQACLS*ECECCG
Trigger: TCCACAGCATTCACATTCTCAGGATAAACATGCTTG...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAGAGGGTCTGTTCTTCTaGATCTGTGTCCTCAGACGT +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYREGLFF*ICVLRR
Trigger: ACGTCTGAGGACACAGATTCAGAAGAACAGACCCTC...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTTGGCTTCTTTCATCCTaGGTCCCTCGTTTCCTAAAG +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSWLLSS*VPRFLK
Trigger: CTTTAGGAAACGAGGGACGCAGGATGAAAGAAGCCA...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAATTGCACGCAGTACATaGTGTGGTTCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRIARST*CGSPAR
Trigger: ACGAGCTGGAGAACCACAGCATGTACTGCGTGCAAT...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAAGCACACGGGCATCTTaGATTGCACGCAGTACATGC +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKSTRAS*IARSTC
Trigger: GCATGTACTGCGTGCAATGCAAGATGCCCGTGTGCT...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTAGCACACGGGCATCTTaGATTGCACGCAGTACATGC +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLSTRAS*IARSTC
Trigger: GCATGTACTGCGTGCAATGCAAGATGCCCGTGTGCT...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGACCACCTTCAGCTTGTaGTCATGCTCCTTGTTGACG +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLTTFSL*SCSLLT
Trigger: CGTCAACAAGGAGCATGAGCACAAGCTGAAGGTGGT...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTGGCGCAATTTCACTGTaGAGTGAGAGATCTGATCTC +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSGAISL*SERSDL
Trigger: GAGATCAGATCTCTCACTGCACAGTGAAATTGCGCC...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAGAAGACCATCCACAGTaGACATTGTCTCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYREDHPQ*TLSPSP
Trigger: TGGGGAAGGAGACAATGTGCACTGTGGATGGTCTTC...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATGCTCCCAGTAGTGGATaGCCTTGGAGAAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNAPSSG*PWRSQS
Trigger: AGACTGGCTTCTCCAAGGGCATCCACTACTGGGAGC...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTACTCCACGTTATCAAATaGTATGGGACCTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLLHVIK*YGTLLF
Trigger: GAACAACAAGGTCCCATAGCATTTGATAACGTGGAG...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTATTAAGTCCCCTGGTTTaGCTGTGTCTTAGAGACTTT +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLLSPLV*LCLRDF
Trigger: AAAGTCTCTAAGACACAGGCAAACCAGGGGACTTAA...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAGGTAACCGATGGAAATaGTCAGCATTAGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQGNRWK*SALVRI
Trigger: GATTCTGACTAATGCTGACCATTTCCATCGGTTACC...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAACTCCTTGGCTTCTTTaGCCCTGTCTGACAGTCCGT +
Preference number: 4 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILTPWLL*PCLTVR
Trigger: ACGGACTGTCAGACAGGGCCAAAGAAGCCAAGGAGT...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTACTCCTTGGCTTCTTTaGCCCTGTCTGACAGTCCGT +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLTPWLL*PCLTVR
Trigger: ACGGACTGTCAGACAGGGCCAAAGAAGCCAAGGAGT...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp GAAAATGTTAAAAGCCTCAGAGGTTATATCTGGCCATCAAATTCAAGCCTCTCAGTCCGTGGTCATCCTTaGAGTGAGTGTGCCTTTACC +
Preference number: 4 (lower is better)
Translates to: ENVKSLRGYIWPSNSSLSVRGHP*SECAFT
Trigger: GGTAAAGGCACACTCACTCCAAGGATGACCACGGAC...TGAGAGGCTTGAATTTGATGGCCAGATATAACCTCTGAGGCTTTTAACATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACGAAATCCAGCTGGTaGATGGATTGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKTKSSW*MDCSRG
Trigger: CCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGT...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCTTTGTTGGAAGAGAACTTGTTCCGTTTGTTTCATCTAGAAAATGACCCCCAGTGCACGAAATCCAGCTaGTGGATGGATTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLLEENLFRLFHLENDPQCTKSS*WMDCSR
Trigger: TCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCA...CTGGGGGTCATTTTCTAGATGAAACAAACGGAACAAGTTCTCTTCCAACAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTAGGGGTTGCTGGGACTaGAGAGGAAGCTTTCACTTG +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTRGCWD*RGSFHL
Trigger: CAAGTGAAAGCTTCCTCTCCAGTCCCAGCAACCCCT...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGATCTTTCCGAAGGCACTaGAAAAGGGAGGGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRSFRRH*KREGLF
Trigger: GAACAGACCCTCCCTTTTCCAGTGCCTTCGGAAAGA...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGAATGCAAGCTCAGCTaGTGGGGTGAGGATCGGAAA +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLECKLS*WGEDRK
Trigger: TTTCCGATCCTCACCCCACCAGCTGAGCTTGCATTC...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TCTTTGTTGGAAGAGAACTTGTTCCGTTTGTTTCATCTAGAAAATGACCCCCAGCATGATGTGTATCGGTaGAGAATGGGAGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SLLEENLFRLFHLENDPQHDVYR*RMGACS
Trigger: AGAGCAGGCTCCCATTCTCCACCGATACACATCATG...CTGGGGGTCATTTTCTAGATGAAACAAACGGAACAAGTTCTCTTCCAACAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TCTTTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTGGCACCAGCCACAATGGGAACAGGTCATGTaGGCATTTTCCCTCAGCATA +
Preference number: 4 (lower is better)
Translates to: SLIKMTPQSVRMLWHQPQWEQVM*AFSLSI
Trigger: TATGCTGAGGGAAAATGCCCACATGACCTGTTCCCA...TTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TCTTTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTGGCACCAGCCACAATCACTGTACTCCAAATaGGAACAGGTCATGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SLIKMTPQSVRMLWHQPQSLYSK*EQVMWA
Trigger: TGCCCACATGACCTGTTCCCATTTGGAGTACAGTGA...TTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGCCTTTGGTTCGGTTaGGGCAAGAACAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILGLWFG*GKNSLS
Trigger: AGACAAACTGTTCTTGCCTCAACCGAACCAAAGGCC...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGACGTTGTATGTGCTGTTaGAGTGAAGACCATCCACAG +
Preference number: 4 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRRCMCC*SEDHPQ
Trigger: CTGTGGATGGTCTTCACTTCAACAGCACATACAACG...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGCGAGTTGTTGTGCATaGACCAGCTCCGGTTATTGT +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLASCCA*TSSGYC
Trigger: ACAATAACCGGAGCTGGTTCATGCACAACAACTCGC...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTATTTATCCTGAGAATGTaGATGCTGTGGACTGCAACT +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLFILRM*MLWTAT
Trigger: AGTTGCAGTCCACAGCATTCACATTCTCAGGATAAA...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTGAGGAAGCTTTCACTTaGACGAAATCCAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTEEAFT*TKSSWW
Trigger: CCACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTC...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAATTGACCACCGTTaGCATCATCCAGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILGIDHR*HHPAPE
Trigger: TTCTGGAGCTGGATGATGGCAACGGTGGTCAATTCC...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp GAAAATGTTAAAAGCCTCAGAGGTTATATCTGGCCATCAAATTCAAGCCTCTCAGGAATTGACCACCGTTaGCATCATCCAGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ENVKSLRGYIWPSNSSLSGIDHR*HHPAPE
Trigger: TTCTGGAGCTGGATGATGGCAACGGTGGTCAATTCC...TGAGAGGCTTGAATTTGATGGCCAGATATAACCTCTGAGGCTTTTAACATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATACCTTCATCACGTCCATaGGAGCCACACCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIPSSRP*EPHQRQ
Trigger: CTGCCTTTGGTGTGGCTCGCATGGACGTGATGAAGG...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTCAACTGGGTAACCGATaGAAATGGTCAGCATTAGTC +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSQLGNR*KWSALV
Trigger: GACTAATGCTGACCATTTCCATCGGTTACCCAGTTG...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAATCCACACTGTTCTCCTaGATCTGCTGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKSTLFS*ICWTML
Trigger: CAACATGGTCCAGCAGATCCAGGAGAACAGTGTGGA...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTTCCACACTGTTCTCCTaGATCTGCTGGACCATGTTG +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLSTLFS*ICWTML
Trigger: CAACATGGTCCAGCAGATCCAGGAGAACAGTGTGGA...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAATGAGACCTGTGGTCTaGCGCAATTTCACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKMRPVV*RNFTVQ
Trigger: CTGCACAGTGAAATTGCGCCAGACCACAGGTCTCAT...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTATGAGACCTGTGGTCTaGCGCAATTTCACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLMRPVV*RNFTVQ
Trigger: CTGCACAGTGAAATTGCGCCAGACCACAGGTCTCAT...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGTAGCGCTGTTGTTGTaGGTACAACATTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLVALLL*VQHSSS
Trigger: GCTGGAGGAATGTTGTACCCACAACAACAGCGCTAC...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACTCCCTCAGTTCTGTTaGTGTGCGAGTTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKLPQFC*CASCCA
Trigger: TGCACAACAACTCGCACACCAACAGAACTGAGGGAG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTCTCCCTCAGTTCTGTTaGTGTGCGAGTTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLLPQFC*CASCCA
Trigger: TGCACAACAACTCGCACACCAACAGAACTGAGGGAG...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAAATAAAAGCAAAATCTaGGAGTGGGAACCAAGTGAC +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQNKSKI*EWEPSD
Trigger: GTCACTTGGTTCCCACTCCCAGATTTTGCTTTTATT...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAACATTTCTGGTGCTATaGCCAGAATGTGTGGATTTT +
Preference number: 4 (lower is better)
Translates to: QLILPYLPLQPHCLTESLTFLVL*PECVDF
Trigger: AAAATCCACACATTCTGGCCATAGCACCAGAAATGT...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAATCAATTTTTAAGGCGTaGTATCATAGCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQSIFKA*YHSSIS
Trigger: GCTGATGCTGCTATGATACCACGCCTTAAAAATTGA...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGCTTCATATCTTGGTCTaGGCCTTACGCTGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLLHILV*ALRCQL
Trigger: AAGCTGACAGCGTAAGGCCCAGACCAAGATATGAAG...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp ATCTTTGGTTTGATCACATCCACATACCATAGGCTCTCTAAAGGCAGGAGAGGAATGCAGAGCAAGTCATaGAAACACTTCAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: IFGLITSTYHRLSKGRRGMQSKS*KHFRNV
Trigger: CACATTCCTGAAGTGTTTCCATGACTTGCTCTGCAT...TCCTCTCCTGCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TCTTTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTGGCACCAGCCACAAAGTGTCAGAATGCTTTaGCACCAGCCACAAATACCT +
Preference number: 4 (lower is better)
Translates to: SLIKMTPQSVRMLWHQPQSVRML*HQPQIP
Trigger: AGGTATTTGTGGCTGGTGCCAAAGCATTCTGACACT...TTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp TCTTTGTTGGAAGAGAACTTGTTCCGTTTGTTTCATCTAGAAAATGACCCCCAGCACCTTGTACACACATaGGAAATGAGGCCATCACCA +
Preference number: 4 (lower is better)
Translates to: SLLEENLFRLFHLENDPQHLVHT*EMRPSP
Trigger: TGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTG...CTGGGGGTCATTTTCTAGATGAAACAAACGGAACAAGTTCTCTTCCAACAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATGGTGCACTCTTCTTATaGGGGCGTCAGAAATCTGCA +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNGALFL*GRQKSA
Trigger: TGCAGATTTCTGACGCCCTCATAAGAAGAGTGCACC...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTTATGTGCTGTTGAAGTaGAGACCATCCACAGTGCAC +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLYVLLK*RPSTVH
Trigger: GTGCACTGTGGATGGTCTTCACTTCAACAGCACATA...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTCGTTGTATGTGCTGTTaGAGTGAAGACCATCCACAG +
Preference number: 4 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLRCMCC*SEDHPQ
Trigger: CTGTGGATGGTCTTCACTTCAACAGCACATACAACG...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GAAAATGTTAAAAGCCTCAGAGGTTATATCTGGCCATCAAATTCAAGCCTCTCACGTTGTATGTGCTGTTaGAGTGAAGACCATCCACAG +
Preference number: 4 (lower is better)
Translates to: ENVKSLRGYIWPSNSSLSRCMCC*SEDHPQ
Trigger: CTGTGGATGGTCTTCACTTCAACAGCACATACAACG...TGAGAGGCTTGAATTTGATGGCCAGATATAACCTCTGAGGCTTTTAACATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR TCA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTGATCCTACCCTGATGTaGACCTGTGTAGCGGATATT +
Preference number: 4 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLDPTLM*TCVADI
Trigger: AATATCCGCTACACAGGTTCACATCAGGGTAGGATC...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAACGGGCATCTTGCATTaGACGCAGTACATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSITGILH*TQYMLW
Trigger: CCACAGCATGTACTGCGTGCAATGCAAGATGCCCGT...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATTCTGCTGGACCATGTTaGGCAGCTGTACCAGAAACT +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNSAGPC*AAVPET
Trigger: AGTTTCTGGTACAGCTGCGCAACATGGTCCAGCAGA...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATGGAATTGACCACCGTTaGCATCATCCAGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNGIDHR*HHPAPE
Trigger: TTCTGGAGCTGGATGATGGCAACGGTGGTCAATTCC...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATTCAGTTCTGTTGGTGTaGGAGTTGTTGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYSVLLV*ELLCMN
Trigger: GTTCATGCACAACAACTCGCACACCAACAGAACTGA...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTTGTGGGTGTAAAGACTaGAGAGGACCAGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTCGCKD*RGPAFL
Trigger: GAGAAAAGCTGGTCCTCTGCAGTCTTTACACCCACA...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATGACTGTAAAGAGGAATaGAAGCTCAGCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNDCKEE*KLSWWG
Trigger: ACCCCACCAGCTGAGCTTGCATTCCTCTTTACAGTC...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAAAGAGCCAAACAAGAGTaGAGAGAAGATGCTCAGATT +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVERAKQE*REDAQI
Trigger: AATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTCT...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATAGTAGTGGATGCCCTTaGAGAAGCCAGTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNSSGCP*RSQSSL
Trigger: TAGGGAAGACTGGCTTCTCCAAGGGCATCCACTACT...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAAGCAAAATCTGGGAGTaGGAACCAAGTGACTTGGTG +
Preference number: 4 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKSKIWE*EPSDLV
Trigger: CACCAAGTCACTTGGTTCCCACTCCCAGATTTTGCT...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTACAGTGGCCAGGGTTCTaGCCTATCCTAATTATAGAG +
Preference number: 4 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILQWPGF*PILIIE
Trigger: CTCTATAATTAGGATAGGCCAGAACCCTGGCCACTG...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTAGAAAAGGCATTGAGTTaGTACATTTCTGGTGCTATG +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLEKALS*YISGAM
Trigger: CATAGCACCAGAAATGTACCAACTCAATGCCTTTTC...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR TCA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATTGCATCCCGGTGCATTaGGAGACTGTAAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNCIPVH*ETVKRN
Trigger: ATTCCTCTTTACAGTCTCTCAATGCACCGGGATGCA...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAATAAGTTGCCAGTGCTaGTCCCTTTCTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIISCQC*SLSLLL
Trigger: GAGGAGGAGAGAAAGGGATCAGCACTGGCAACTTAT...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTATTGTCCACATACATTaGCCAAGCTTTGTCGTCTTT +
Preference number: 4 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSIVHIH*PSFVVF
Trigger: AAAGACGACAAAGCTTGGGCAATGTATGTGGACAAT...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAAATTGTCCACATACATTaGCCAAGCTTTGTCGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEIVHIH*PSFVVF
Trigger: AAAGACGACAAAGCTTGGGCAATGTATGTGGACAAT...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTTCAGTTCTGTTGGTGTaGGAGTTGTTGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTSVLLV*ELLCMN
Trigger: GTTCATGCACAACAACTCGCACACCAACAGAACTGA...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR GCA 90 bp TCTTTGTTGGAAGAGAACTTGTTCCGTTTGTTTCATCTAGAAAATGACCCCCAGGAGAAAAGAGGCAACTaGTCTCAAACTGATAGGTCA +
Preference number: 4 (lower is better)
Translates to: SLLEENLFRLFHLENDPQEKRGN*SQTDRS
Trigger: TGACCTATCAGTTTGAGAGCAGTTGCCTCTTTTCTC...CTGGGGGTCATTTTCTAGATGAAACAAACGGAACAAGTTCTCTTCCAACAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR GCA 90 bp TCTTTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTGGCACCAGCCACAAAACGAGAGACATAAGTaGTCAGGCTGTTATGCTAAT +
Preference number: 4 (lower is better)
Translates to: SLIKMTPQSVRMLWHQPQNERHK*SGCYAN
Trigger: ATTAGCATAACAGCCTGAGCACTTATGTCTCTCGTT...TTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATATGCACGAAATCCAGCTaGTGGATGGATTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSICTKSS*WMDCSR
Trigger: TCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCA...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATACTCTCCTTCATATCTTaGTCTGGGCCTTACGCTGTC +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSILSFIS*SGPYAV
Trigger: GACAGCGTAAGGCCCAGACCAAGATATGAAGGAGAG...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTCTAGAGCTACAGAGATaGTCATTAGCCAACCATGAA +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLLELQR*SLANHE
Trigger: TTCATGGTTGGCTAATGATCATCTCTGTAGCTCTAG...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAGGCGCAATTTCACTGTaGAGTGAGAGATCTGATCTC +
Preference number: 4 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIGAISL*SERSDL
Trigger: GAGATCAGATCTCTCACTGCACAGTGAAATTGCGCC...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR GCA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTCTCCACGTTATCAAATaGTATGGGACCTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLLHVIK*YGTLLF
Trigger: GAACAACAAGGTCCCATAGCATTTGATAACGTGGAG...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTGTCTTGAACAGTGCCTaGTCAATAGTAGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTVLNSA*SIVGSQ
Trigger: TTGAGAACCTACTATTGACCAGGCACTGTTCAAGAC...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTAAATTAGGCTGTGAATaGCAGCAGAGTGGATGGATT +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTKLGCE*QQSGWI
Trigger: AATCCATCCACTCTGCTGCCATTCACAGCCTAATTT...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTAGCCATTGAGTCTCATTaGAGAGTAAATCAAATATCA +
Preference number: 4 (lower is better)
Translates to: LLSDRFILPKLSSAELTLAIESH*RVNQIS
Trigger: TGATATTTGATTTACTCTCCAATGAGACTCAATGGC...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp TGCTCTCAAACTGATAGGTCATCCCTGAGAGAAGGTGCTAAAATGATAATTCTGCCGATGTGGAATCTTTaGTTTGATCACATCCACATA +
Preference number: 4 (lower is better)
Translates to: CSQTDRSSLREGAKMIILPMWNL*FDHIHI
Trigger: TATGTGGATGTGATCAAACCAAAGATTCCACATCGG...CAGAATTATCATTTTAGCACCTTCTCTCAGGGATGACCTATCAGTTTGAGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
3UTR CAA 72 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTaGTTTTCATGCCAGTTGGTTAAAGGCTTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: SQALLSFVKSFY*FSCQLVKGFRF
Trigger: GAAACGAAAGCCTTTAACCAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR TCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTATTAGTCAGAATCTATaGCCCCTTCGTTTCATGCTT +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTISQNL*PLRFML
Trigger: AAGCATGAAACGAAGGGGTCATAGATTCTGACTAAT...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CCA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATTGTTTTCATGCCAGTTaGTTAAAGGCTTTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYCFHAS*LKAFVS
Trigger: AGAAACGAAAGCCTTTAACCAACTGGCATGAAAACA...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CCA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTTATGGCCAGAATGTGTaGATTTTTAGCATCATTCTA +
Preference number: 4 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTYGQNV*IFSIIL
Trigger: TAGAATGATGCTAAAAATCCACACATTCTGGCCATA...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CCA 90 bp CCTGAGCTGGCGAGGTGGCCGACGGGCCCGTCTTGTCCAGCACCCTaGCCAGCGGCGGCGGCTGTGGTGGTGGTGCCTTCCCGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: PELARWPTGPSCPAP*PAAAAVVVVPSRAA
Trigger: TGCTGCGCGGGAAGGCACCACCACCACAGCCGCCGCCGCTGGCCAGGGTGCTGGACAAGACGGGCCCGTCGGCCACCTCGCCAGCTCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS TCA 90 bp GGGGGCTGGGGCTTCTCGCCAGCGTTTGCGTTTGGCTCCCAGCTCTaGGCTCCGCGCCCACCTACCGCGGGCGAGTGCTGCGCAGCACGG +
Preference number: 5 (lower is better)
Translates to: GGWGFSPAFAFGSQL*APRPPTAGECCAAR
Trigger: CCGTGCTGCGCAGCACTCGCCCGCGGTAGGTGGGCGCGGAGCTCAGAGCTGGGAGCCAAACGCAAACGCTGGCGAGAAGCCCCAGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS TCA 90 bp TGGGGACCGGTCTGGGAGGAGACAGCGACGGCTGCAGCGGGTGCCTaGGCTGGCGAGGTGGCCGACGGGCCCGTCTTGTCCAGCACCCTG +
Preference number: 5 (lower is better)
Translates to: WGPVWEETATAAAGA*AGEVADGPVLSSTL
Trigger: CAGGGTGCTGGACAAGACGGGCCCGTCGGCCACCTCGCCAGCTCAGGCACCCGCTGCAGCCGTCGCTGTCTCCTCCCAGACCGGTCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CCA 90 bp GTGGGCTGCCGGAGGGGGCTGGGGCTTCTCGCCAGCGTTTGCGTTTaGCTCCCAGCTCTGAGCTCCGCGCCCACCTACCGCGGGCGAGTG +
Preference number: 5 (lower is better)
Translates to: VGCRRGLGLLASVCV*LPALSSAPTYRGRV
Trigger: CACTCGCCCGCGGTAGGTGGGCGCGGAGCTCAGAGCTGGGAGCCAAACGCAAACGCTGGCGAGAAGCCCCAGCCCCCTCCGGCAGCCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS GCA 90 bp TCCATGGGGACCGGTCTGGGAGGAGACAGCGACGGCTGCAGCGGGTaGCTGAGCTGGCGAGGTGGCCGACGGGCCCGTCTTGTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SMGTGLGGDSDGCSG*LSWRGGRRARLVQH
Trigger: GTGCTGGACAAGACGGGCCCGTCGGCCACCTCGCCAGCTCAGGCACCCGCTGCAGCCGTCGCTGTCTCCTCCCAGACCGGTCCCCATGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS GCA 90 bp TCCATCTCCTCCATGGGGACCGGTCTGGGAGGAGACAGCGACGGCTaGAGCGGGTGCCTGAGCTGGCGAGGTGGCCGACGGGCCCGTCTT +
Preference number: 5 (lower is better)
Translates to: SISSMGTGLGGDSDG*SGCLSWRGGRRARL
Trigger: AAGACGGGCCCGTCGGCCACCTCGCCAGCTCAGGCACCCGCTGCAGCCGTCGCTGTCTCCTCCCAGACCGGTCCCCATGGAGGAGATGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CCA 90 bp GCTGTGGTTCTCCAGCTCGTGGTCTGTGCAGGTGGAGACCTTGCGTaGGCTCAGCCTCCGGCTCACACGACCCTGGGCCGGGGGCACCAG +
Preference number: 5 (lower is better)
Translates to: AVVLQLVVCAGGDLA*AQPPAHTTLGRGHQ
Trigger: CTGGTGCCCCCGGCCCAGGGTCGTGTGAGCCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS TCA 90 bp GAATCCGCTGACGCCGTGCCCTGGAGCTCCCCCATCCCGGGAGTCTaGCGGCGCTGGCGCAAGCCCTGGCGACACTCTTGGCTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: ESADAVPWSSPIPGV*RRWRKPWRHSWLLS
Trigger: TGAAAGAAGCCAAGAGTGTCGCCAGGGCTTGCGCCAGCGCCGTCAGACTCCCGGGATGGGGGAGCTCCAGGGCACGGCGTCAGCGGATTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS GCA 90 bp ACATGCTGTGGTTCTCCAGCTCGTGGTCTGTGCAGGTGGAGACCTTaGGTGGGCTCAGCCTCCGGCTCACACGACCCTGGGCCGGGGGCA +
Preference number: 5 (lower is better)
Translates to: TCCGSPARGLCRWRP*VGSASGSHDPGPGA
Trigger: TGCCCCCGGCCCAGGGTCGTGTGAGCCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS GCA 90 bp CGCTGCTGGCAGCCTTCGCAGGCGTCTCACCCGGGCCTAGGCTTCTaGACGGCAGTGGGGCTTTTCTCCTTCTCCGTGAATCCGCTGACG +
Preference number: 5 (lower is better)
Translates to: RCWQPSQASHPGLGF*TAVGLFSFSVNPLT
Trigger: CGTCAGCGGATTCACGGAGAAGGAGAAAAGCCCCACTGCCGTGCAGAAGCCTAGGCCCGGGTGAGACGCCTGCGAAGGCTGCCAGCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS GCA 90 bp ACATACTCCTGGGCGGGTGAGGAGCGTTGTGTAGCGTTTTCATGCTaGCATGCAGGAAGGAGGCGTCCAGGGCCAGGGCAGACAGGGGCA +
Preference number: 5 (lower is better)
Translates to: TYSWAGEERCVAFSC*HAGRRRPGPGQTGA
Trigger: TGCCCCTGTCTGCCCTGGCCCTGGACGCCTCCTTCCTGCATGGCAGCATGAAAACGCTACACAACGCTCCTCACCCGCCCAGGAGTATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555170.1
CDS-3UTR CAA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCGCCGACGGGCCCGTCTaGTCCAGCACCCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGADGPV*SSTLAS
Trigger: GCTGGCCAGGGTGCTGGACAAGACGGGCCCGTCGGC...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS TCA 90 bp TCCACGGATCCTTCTTCCTCCTCGCGGCCTCCCAAAGCACCTGGCTaGGCTTTTTCGAGGCCCGCTGGGCCTTTGGTTCGGTTGAGGCAA +
Preference number: 5 (lower is better)
Translates to: STDPSSSSRPPKAPG*AFSRPAGPLVRLRQ
Trigger: TTGCCTCAACCGAACCAAAGGCCCAGCGGGCCTCGAAAAAGCTCAGCCAGGTGCTTTGGGAGGCCGCGAGGAGGAAGAAGGATCCGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CCA 90 bp TCCTTCCACGGATCCTTCTTCCTCCTCGCGGCCTCCCAAAGCACCTaGCTGAGCTTTTTCGAGGCCCGCTGGGCCTTTGGTTCGGTTGAG +
Preference number: 5 (lower is better)
Translates to: SFHGSFFLLAASQST*LSFFEARWAFGSVE
Trigger: CTCAACCGAACCAAAGGCCCAGCGGGCCTCGAAAAAGCTCAGCCAGGTGCTTTGGGAGGCCGCGAGGAGGAAGAAGGATCCGTGGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS TCA 90 bp GTAAGAACAGGCAGCTGGCGCCTCCACGGCACATCCTTAGGCTATTaGTGCTCTGCTGGAGTAGAAGTCGGGGACTGGGAGCCCGGTGTG +
Preference number: 5 (lower is better)
Translates to: VRTGSWRLHGTSLGY*CSAGVEVGDWEPGV
Trigger: CACACCGGGCTCCCAGTCCCCGACTTCTACTCCAGCAGAGCATCAATAGCCTAAGGATGTGCCGTGGAGGCGCCAGCTGCCTGTTCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298355.7
ENST00000684578.1
CDS GCA 90 bp GGTAGCCAGCAACAGCTGTTTAACCTCAGGGGCAGGGTGCTTACCTaGACGTTCCTGTTCAGGCTGACCGCAGGGAAGAAGAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GSQQQLFNLRGRVLT*TFLFRLTAGKKRPS
Trigger: GGAGGGCCTCTTCTTCCCTGCGGTCAGCCTGAACAGGAACGTGCAGGTAAGCACCCTGCCCCTGAGGTTAAACAGCTGTTGCTGGCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS GCA 90 bp GTGGGCAGTGGTGGGGTTACCTCCGGGCTTGCCAGCCACTTTAGATaGCACGCAGTTCTCGCTCTGAGGGATACTGCTGAAGGGCCTTAC +
Preference number: 5 (lower is better)
Translates to: VGSGGVTSGLASHFR*HAVLALRDTAEGPY
Trigger: GTAAGGCCCTTCAGCAGTATCCCTCAGAGCGAGAACTGCGTGGCATCTAAAGTGGCTGGCAAGCCCGGAGGTAACCCCACCACTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS GCA 90 bp ATAACATACTCCTGGGCGGGTGAGGAGCGTTGTGTAGCGTTTTCATaGTGCCATGCAGGAAGGAGGCGTCCAGGGCCAGGGCAGACAGGG +
Preference number: 5 (lower is better)
Translates to: ITYSWAGEERCVAFS*CHAGRRRPGPGQTG
Trigger: CCCTGTCTGCCCTGGCCCTGGACGCCTCCTTCCTGCATGGCAGCATGAAAACGCTACACAACGCTCCTCACCCGCCCAGGAGTATGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555170.1
CDS-3UTR CAA 90 bp GAAGCCGCCGGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCTCGCAGAGCTGGCACTaGAGGGCCGCGGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: EAAGPSHWNCRCGIFGLISQSWH*RAAALL
Trigger: GAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGCGA...GATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS TCA 90 bp CCTCCGGGCTTGCCAGCCACTTTAGATGCCACGCAGTTCTCGCTCTaGGGGATACTGCTGAAGGGCCTTACCCTCAGACGTTTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: PPGLPATLDATQFSL*GILLKGLTLRRLED
Trigger: GTCCTCCAAACGTCTGAGGGTAAGGCCCTTCAGCAGTATCCCTCAGAGCGAGAACTGCGTGGCATCTAAAGTGGCTGGCAAGCCCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp GAAGCCGCCGGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCTGCTCATGCTCCTTGTaGACGCGGGCCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EAAGPSHWNCRCGIFGLICSCSL*TRASSW
Trigger: CCAGCTGCTGGCCCGCGTCAACAAGGAGCATGAGCA...GATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAGCCGACGGGCCCGTCTaGTCCAGCACCCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQADGPV*SSTLAS
Trigger: GCTGGCCAGGGTGCTGGACAAGACGGGCCCGTCGGC...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp AATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACCAGGTGATACAGGAGTaGCGGGGCACCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: NAEQVMETLQECGQWWGYQVIQE*RGTGAR
Trigger: CCTGGCCCCGGTGCCCCGCAACTCCTGTATCACCTG...GTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp CTGAAGGGACTGGCAAAGATGAAAATGGCGGGTAATGCGAAGTTGCTGGTCTCTGTGCAGGTGGAGACCTaGCGTGGGCTCAGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LKGLAKMKMAGNAKLLVSVQVET*RGLSLR
Trigger: CCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCAC...AGAGACCAGCAACTTCGCATTACCCGCCATTTTCATCTTTGCCAGTCCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp AGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACCTCCGGGTCGTGGCTGGAGTGTTaGCCCTCCTCCAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: SKSWKHFRNVGSGGVTSGSWLEC*PSSKHW
Trigger: CCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGA...CCCGGAGGTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp GAAGCCGCCGGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCATGGCCCCCAGAGCCTaGACTTCGTGGCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: EAAGPSHWNCRCGIFGLIMAPRA*TSWLEC
Trigger: ACACTCCAGCCACGAAGTCAAGGCTCTGGGGGCCAT...GATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS CCA 90 bp CTCGCGGCCTCCCAAAGCACCTGGCTGAGCTTTTTCGAGGCCCGCTaGGCCTTTGGTTCGGTTGAGGCAAGAACAGTTTGTCTATTTCTG +
Preference number: 5 (lower is better)
Translates to: LAASQSTWLSFFEAR*AFGSVEARTVCLFL
Trigger: CAGAAATAGACAAACTGTTCTTGCCTCAACCGAACCAAAGGCCCAGCGGGCCTCGAAAAAGCTCAGCCAGGTGCTTTGGGAGGCCGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CCA 90 bp ATATCTTGGTCTGGGCCTTACGCTGTCAGCTTCCCTCTCTTCGGTTaGATTGAACGGCCCTGGGCAGCCTTTGAACCGGTAGCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: ISWSGPYAVSFPLFG*IERPWAAFEPVASN
Trigger: GTTGCTGGCTACCGGTTCAAAGGCTGCCCAGGGCCGTTCAATCCAACCGAAGAGAGGGAAGCTGACAGCGTAAGGCCCAGACCAAGATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp GGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACATCCAGTACGCGATTCTaGGGGAAGCCGCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: GPSHWNCRCGIFGLITSTSSTRF*GKPRSP
Trigger: GGGGCTCCGCGGCTTCCCCAAGAATCGCGTACTGGA...TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS CCA 90 bp ACCTTCAGCTTGTGCTCATGCTCCTTGTTGACGCGGGCCAGCAGCTaGGCTTTTCTTCTGTTGAGGGCATCGATGAGGGCATCACATTGG +
Preference number: 5 (lower is better)
Translates to: TFSLCSCSLLTRASS*AFLLLRASMRASHW
Trigger: CCAATGTGATGCCCTCATCGATGCCCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGTCAACAAGGAGCATGAGCACAAGCTGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CCA 90 bp CCTTACGCTGTCAGCTTCCCTCTCTTCGGTTGGATTGAACGGCCCTaGGCAGCCTTTGAACCGGTAGCCAGCAACAGCTGTTTAACCTCA +
Preference number: 5 (lower is better)
Translates to: PYAVSFPLFGWIERP*AAFEPVASNSCLTS
Trigger: TGAGGTTAAACAGCTGTTGCTGGCTACCGGTTCAAAGGCTGCCCAGGGCCGTTCAATCCAACCGAAGAGAGGGAAGCTGACAGCGTAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAAACACGCGGACGCCGTaGGGGGACTTCTGGCACGGG +
Preference number: 5 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQNTRTP*GDFWHG
Trigger: CCCGTGCCAGAAGTCCCCCAACGGCGTCCGCGTGTT...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp AGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACCTCCGGGAACTCCTTGGCTTCTTaGGCCCTGTCTGACAGTCCG +
Preference number: 5 (lower is better)
Translates to: SKSWKHFRNVGSGGVTSGNSLAS*ALSDSP
Trigger: CGGACTGTCAGACAGGGCCAAAGAAGCCAAGGAGTT...CCCGGAGGTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp TCCTGTTTGGTGCCCACAGGAAGTCTCAATCCTGGTGCTGACGGCCTCCGCTTTTGGGCTTTTCTTCTGTaGAGGGCATCGATGAGGGCA +
Preference number: 5 (lower is better)
Translates to: SCLVPTGSLNPGADGLRFWAFLL*RASMRA
Trigger: TGCCCTCATCGATGCCCTCAACAGAAGAAAAGCCCA...AAAGCGGAGGCCGTCAGCACCAGGATTGAGACTTCCTGTGGGCACCAAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS TCA 90 bp AGACAGACCCAACAAGCTCAGCACCATAACATACTCCTGGGCGGGTaGGGAGCGTTGTGTAGCGTTTTCATGCTGCCATGCAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: RQTQQAQHHNILLGG*GALCSVFMLPCRKE
Trigger: CTCCTTCCTGCATGGCAGCATGAAAACGCTACACAACGCTCCTCACCCGCCCAGGAGTATGTTATGGTGCTGAGCTTGTTGGGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555170.1
CDS CCA 90 bp CAGAGGGCTGTTGTCCAGACTCAAGTCAAAGTCCGTGGTCATCCTTaGAGTGAGTGTGCCTTTACCCCACTGATCCTCAGTCAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: QRAVVQTQVKVRGHP*SECAFTPLILSQVH
Trigger: GTGCACCTGACTGAGGATCAGTGGGGTAAAGGCACACTCACTCCAAGGATGACCACGGACTTTGACTTGAGTCTGGACAACAGCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS-3UTR CAA 90 bp ATCTTTGGTTTGATCACATCCACATACCATAGGCTCTCTAAAGGCAGGAGAGGAAACACGCGGACGCCGTaGGGGGACTTCTGGCACGGG +
Preference number: 5 (lower is better)
Translates to: IFGLITSTYHRLSKGRRGNTRTP*GDFWHG
Trigger: CCCGTGCCAGAAGTCCCCCAACGGCGTCCGCGTGTT...TCCTCTCCTGCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp CCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTCCCATGACGGTGGCTTCCTaGGGCGCCTTCTCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PSAYPSLGIASLRLTTAPMTVAS*GAFSQS
Trigger: GCTCTGCGAGAAGGCGCCCAAGGAAGCCACCGTCAT...GGGAGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp CTGAAGGGACTGGCAAAGATGAAAATGGCGGGTAATGCGAAGTTGCTGGTCTCTTTGTGCTCATGCTCCTaGTTGACGCGGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LKGLAKMKMAGNAKLLVSLCSCS*LTRASS
Trigger: GCTGCTGGCCCGCGTCAACAAGGAGCATGAGCACAA...AGAGACCAGCAACTTCGCATTACCCGCCATTTTCATCTTTGCCAGTCCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp GGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACAGGGTTACCTCCGGGCTaGCCAGCCACTTTAGATGCC +
Preference number: 5 (lower is better)
Translates to: GPSHWNCRCGIFGLITSTGLPPG*PATLDA
Trigger: GGCATCTAAAGTGGCTGGCAAGCCCGGAGGTAACCC...TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS TCA 90 bp GGCTGTTGTCCAGACTCAAGTCAAAGTCCGTGGTCATCCTTGGAGTaGGTGTGCCTTTACCCCACTGATCCTCAGTCAGGTGCACTCTTC +
Preference number: 5 (lower is better)
Translates to: GCCPDSSQSPWSSLE*VCLYPTDPQSGALF
Trigger: GAAGAGTGCACCTGACTGAGGATCAGTGGGGTAAAGGCACACTCACTCCAAGGATGACCACGGACTTTGACTTGAGTCTGGACAACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS GCA 90 bp CGGCGCTGGCGCAAGCCCTGGCGACACTCTTGGCTTCTTTCATCCTaGGTCCCTCGTTTCCTAAAGAGCATGTATAAAGTCGATTTCCTA +
Preference number: 5 (lower is better)
Translates to: RRWRKPWRHSWLLSS*VPRFLKSMYKVDFL
Trigger: TAGGAAATCGACTTTATACATGCTCTTTAGGAAACGAGGGACGCAGGATGAAAGAAGCCAAGAGTGTCGCCAGGGCTTGCGCCAGCGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CCA 90 bp GCTGGGACTGGAGAGGAAGCTTTCACTTGCACGAAATCCAGCTGGTaGATGGATTGCAGCAGAGGGCTGTTGTCCAGACTCAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: AGTGEEAFTCTKSSW*MDCSRGLLSRLKSK
Trigger: CTTTGACTTGAGTCTGGACAACAGCCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTCTCCAGTCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298355.7
ENST00000360392.4
ENST00000684578.1
CDS CCA 90 bp GTTGCTGGGACTGGAGAGGAAGCTTTCACTTGCACGAAATCCAGCTaGTGGATGGATTGCAGCAGAGGGCTGTTGTCCAGACTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: VAGTGEEAFTCTKSS*WMDCSRGLLSRLKS
Trigger: TGACTTGAGTCTGGACAACAGCCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTCTCCAGTCCCAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298355.7
ENST00000360392.4
ENST00000684578.1
CDS CCA 90 bp CTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTaGGCAGTGGTGGGGTTACCTCCGGGCTTGCCAGCCACTTTAGAT +
Preference number: 5 (lower is better)
Translates to: LCAECRASHGNTSGM*AVVGLPPGLPATLD
Trigger: ATCTAAAGTGGCTGGCAAGCCCGGAGGTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS CCA 90 bp GATGTCCGAGTGCGCCGAGCCAGGGTCGAAAGCAAACCAGGCCACTaGGAACAACAGAAGGGAATCAGGTTATTAAGACAGACCCAACAA +
Preference number: 5 (lower is better)
Translates to: DVRVRRARVESKPGH*EQQKGIRLLRQTQQ
Trigger: TTGTTGGGTCTGTCTTAATAACCTGATTCCCTTCTGTTGTTCCCAGTGGCCTGGTTTGCTTTCGACCCTGGCTCGGCGCACTCGGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555170.1
CDS-3UTR CAA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTATCCAGTACGCGATTCTaGGGGAAGCCGCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: LLSDRFILPKLSSAELTLSSTRF*GKPRSP
Trigger: GGGGCTCCGCGGCTTCCCCAAGAATCGCGTACTGGA...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAATGACGGTGGCTTCCTaGGGCGCCTTCTCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQMTVAS*GAFSQS
Trigger: GCTCTGCGAGAAGGCGCCCAAGGAAGCCACCGTCAT...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp CTGAAGGGACTGGCAAAGATGAAAATGGCGGGTAATGCGAAGTTGCTGGTCTCTGATGAGGGCATCACATaGGGCCACCAGACAGGCTTC +
Preference number: 5 (lower is better)
Translates to: LKGLAKMKMAGNAKLLVSDEGIT*GHQTGF
Trigger: GAAGCCTGTCTGGTGGCCCAATGTGATGCCCTCATC...AGAGACCAGCAACTTCGCATTACCCGCCATTTTCATCTTTGCCAGTCCCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp GAAGCCGCCGGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCGACAACGTAGCGCTGTaGTTGTGGGTACAACATTCC +
Preference number: 5 (lower is better)
Translates to: EAAGPSHWNCRCGIFGLIDNVAL*LWVQHS
Trigger: GGAATGTTGTACCCACAACAACAGCGCTACGTTGTC...GATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGACTGACTCCTGTTTTGTaGAAGGCCTTGACCCGAGCG +
Preference number: 5 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRLTPVL*KALTRA
Trigger: CGCTCGGGTCAAGGCCTTCAACAAAACAGGAGTCAG...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp CTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACATGGGACGCCGGCCCAAGCCATaGGAACTGCCGATGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LCRHALHSSIKPPCTHMGRRPKP*ELPMWN
Trigger: ATTCCACATCGGCAGTTCCAATGGCTTGGGCCGGCG...TCCCATGTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS CCA 90 bp AGGATAGGGGTTGCTGGGACTTTCACTTGCACGAAATCCAGCTGGTaGATGGATTGCAGCAGAGGGCTGTTGTCCAGACTCAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: RIGVAGTFTCTKSSW*MDCSRGLLSRLKSK
Trigger: CTTTGACTTGAGTCTGGACAACAGCCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCAAGTGAAAGTCCCAGCAACCCCTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS CCA 90 bp TGTAGGATAGGGGTTGCTGGGACTTTCACTTGCACGAAATCCAGCTaGTGGATGGATTGCAGCAGAGGGCTGTTGTCCAGACTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: CRIGVAGTFTCTKSS*WMDCSRGLLSRLKS
Trigger: TGACTTGAGTCTGGACAACAGCCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCAAGTGAAAGTCCCAGCAACCCCTATCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTACGCCAGCGTTTGCGTTaGGCTCCCAGCTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: LLSDRFILPKLSSAELTLRQRLR*APSSEL
Trigger: GAGCTCAGAGCTGGGAGCCAAACGCAAACGCTGGCG...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAATCGCAGAGCTGGCACTaGAGGGCCGCGGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVESQSWH*RAAALL
Trigger: GAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGCGA...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTAACTCCTTGGCTTCTTaGGCCCTGTCTGACAGTCCG +
Preference number: 5 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSNSLAS*ALSDSP
Trigger: CGGACTGTCAGACAGGGCCAAAGAAGCCAAGGAGTT...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGAATCTGCTGGACCATGTaGCGCAGCTGTACCAGAAAC +
Preference number: 5 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRICWTM*RSCTRN
Trigger: GTTTCTGGTACAGCTGCGCAACATGGTCCAGCAGAT...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp GCGGCTCTGTGCAGAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGAGGAAGCTTTCACTaGCACGAAATCCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: AALCRMQSKSWKHFRNVGRGSFH*HEIQLV
Trigger: CACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTCT...GCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTCTGCACAGAGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp GAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTAGGGCTGACTCCTGTTTaGTTGAAGGCCTTGACCCGA +
Preference number: 5 (lower is better)
Translates to: ECRASHGNTSGMWAVVGLGLTPV*LKALTR
Trigger: TCGGGTCAAGGCCTTCAACAAAACAGGAGTCAGCCC...TAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTATGGAGGACCAGGGTCTaGCTGTACGGGCTGACTCCT +
Preference number: 5 (lower is better)
Translates to: QLILPYLPLQPHCLTESLWRTRV*LYGLTP
Trigger: AGGAGTCAGCCCGTACAGCAAGACCCTGGTCCTCCA...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAAGGCCACCTCAGACGTTaGGAGGACCAGGGTCTTGCT +
Preference number: 5 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQGHLRR*EDQGLA
Trigger: AGCAAGACCCTGGTCCTCCAAACGTCTGAGGTGGCC...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp GGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACAGGTGACTGGCACATGTaGAGGTTTGTGGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: GPSHWNCRCGIFGLITSTGDWHM*RFVGSG
Trigger: CCCACTTCCCACAAACCTCAACATGTGCCAGTCACC...TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS TCA 90 bp TCAAAGTCCGTGGTCATCCTTGGAGTGAGTGTGCCTTTACCCCACTaGTCCTCAGTCAGGTGCACTCTTCTTATGAGGGCGTCAGAAATC +
Preference number: 5 (lower is better)
Translates to: SKSVVILGVSVPLPH*SSVRCTLLMRASEI
Trigger: GATTTCTGACGCCCTCATAAGAAGAGTGCACCTGACTGAGGATCAGTGGGGTAAAGGCACACTCACTCCAAGGATGACCACGGACTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS-3UTR CAA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTAGCTTCTCGCCAGCGTTaGCGTTTGGCTCCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LLSDRFILPKLSSAELTLASRQR*RLAPSS
Trigger: AGAGCTGGGAGCCAAACGCAAACGCTGGCGAGAAGC...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAGCCGACGGGCCCGTCTaGTCCAGCACCCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIADGPV*SSTLAS
Trigger: GCTGGCCAGGGTGCTGGACAAGACGGGCCCGTCGGC...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACAGGTGATACAGGAGTaGCGGGGCACCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKQVIQE*RGTGAR
Trigger: CCTGGCCCCGGTGCCCCGCAACTCCTGTATCACCTG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTCAGGTGATACAGGAGTaGCGGGGCACCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLQVIQE*RGTGAR
Trigger: CCTGGCCCCGGTGCCCCGCAACTCCTGTATCACCTG...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGTCCAGTACGCGATTCTaGGGGAAGCCGCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLSSTRF*GKPRSP
Trigger: GGGGCTCCGCGGCTTCCCCAAGAATCGCGTACTGGA...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTGTGCAGGTGGAGACCTaGCGTGGGCTCAGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLVQVET*RGLSLR
Trigger: CCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCAC...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTAATGGCCCCCAGAGCCTaGACTTCGTGGCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: LLSDRFILPKLSSAELTLMAPRA*TSWLEC
Trigger: ACACTCCAGCCACGAAGTCAAGGCTCTGGGGGCCAT...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp GGCCCAAGCCATTGGAACTGCCGATGTGGAATCTTTGGTTTGATCACATCCACATGCAGCAGAGGGCTGTaGTCCAGACTCAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GPSHWNCRCGIFGLITSTCSRGL*SRLKSK
Trigger: CTTTGACTTGAGTCTGGACAACAGCCCTCTGCTGCA...TGTGGATGTGATCAAACCAAAGATTCCACATCGGCAGTTCCAATGGCTTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp GAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTAATACACCTCCCGGAATaGACCACCGTTGCCATCATC +
Preference number: 5 (lower is better)
Translates to: ECRASHGNTSGMWAVVGLIHLPE*TTVAII
Trigger: GATGATGGCAACGGTGGTCAATTCCGGGAGGTGTAT...TAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp ATCTTTGGTTTGATCACATCCACATACCATAGGCTCTCTAAAGGCAGGAGAGGATGGAGGACCAGGGTCTaGCTGTACGGGCTGACTCCT +
Preference number: 5 (lower is better)
Translates to: IFGLITSTYHRLSKGRRGWRTRV*LYGLTP
Trigger: AGGAGTCAGCCCGTACAGCAAGACCCTGGTCCTCCA...TCCTCTCCTGCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATAACACGCGGACGCCGTaGGGGGACTTCTGGCACGGG +
Preference number: 5 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNNTRTP*GDFWHG
Trigger: CCCGTGCCAGAAGTCCCCCAACGGCGTCCGCGTGTT...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTTCGCAGAGCTGGCACTaGAGGGCCGCGGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTSQSWH*RAAALL
Trigger: GAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGCGA...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAATGACGGTGGCTTCCTaGGGCGCCTTCTCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRMTVAS*GAFSQS
Trigger: GCTCTGCGAGAAGGCGCCCAAGGAAGCCACCGTCAT...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TCTTCAATCAAACCACCTTGTACACACATGGGAAATGAGGCCATCACCAGCAAGCACGGGCATCTTGCATaGCACGCAGTACATGCTGTG +
Preference number: 5 (lower is better)
Translates to: SSIKPPCTHMGNEAITSKHGHLA*HAVHAV
Trigger: CACAGCATGTACTGCGTGCAATGCAAGATGCCCGTG...CTTGCTGGTGATGGCCTCATTTCCCATGTGTGTACAAGGTGGTTTGATTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp GAATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTAAACGTAGCGCTGTTGTaGTGGGTACAACATTCCTCC +
Preference number: 5 (lower is better)
Translates to: ECRASHGNTSGMWAVVGLNVALL*WVQHSS
Trigger: GGAGGAATGTTGTACCCACAACAACAGCGCTACGTT...TAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTGTTTTGTTGAAGGCCTaGACCCGAGCGTTGTATGTG +
Preference number: 5 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSVLLKA*TRALYV
Trigger: CACATACAACGCTCGGGTCAAGGCCTTCAACAAAAC...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp CTGAAGGGACTGGCAAAGATGAAAATGGCGGGTAATGCGAAGTTGCTGGTCTCTGTTTTGTTGAAGGCCTaGACCCGAGCGTTGTATGTG +
Preference number: 5 (lower is better)
Translates to: LKGLAKMKMAGNAKLLVSVLLKA*TRALYV
Trigger: CACATACAACGCTCGGGTCAAGGCCTTCAACAAAAC...AGAGACCAGCAACTTCGCATTACCCGCCATTTTCATCTTTGCCAGTCCCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAACCTCCCTCAGTTCTGTaGGTGTGCGAGTTGTTGTGC +
Preference number: 5 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQPPSVL*VCELLC
Trigger: GCACAACAACTCGCACACCAACAGAACTGAGGGAGG...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp CCCTCAGCATATCCTTCTCTTGGAATAGCATCACTTAGACTGACAACTGCTCCCGCGGGTAATGCGAAGTaGCTGGTCTCTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: PSAYPSLGIASLRLTTAPAGNAK*LVSSCL
Trigger: CAAACAGGAAGAGACCAGCAACTTCGCATTACCCGC...GGGAGCAGTTGTCAGTCTAAGTGATGCTATTCCAAGAGAAGGATATGCTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS GCA 90 bp ATCAGAAGTCTGCTATTATGTCCCCGTGCACGGTTCCCCAAGACCTaGCTTAACAATGCATTCATACAAAGCCTCATCTTTCCCACAGGG +
Preference number: 5 (lower is better)
Translates to: IRSLLLCPRARFPKT*LNNAFIQSLIFPTG
Trigger: CCCTGTGGGAAAGATGAGGCTTTGTATGAATGCATTGTTAAGGCAGGTCTTGGGGAACCGTGCACGGGGACATAATAGCAGACTTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555933.1
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAGTGCAGGTGGAGACCTaGCGTGGGCTCAGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIVQVET*RGLSLR
Trigger: CCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCAC...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGTCGTGGCTGGAGTGTTaGCCCTCCTCCAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLSWLEC*PSSKHW
Trigger: CCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGA...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATATGGCCCCCAGAGCCTaGACTTCGTGGCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYMAPRA*TSWLEC
Trigger: ACACTCCAGCCACGAAGTCAAGGCTCTGGGGGCCAT...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAATGCTCATGCTCCTTGTaGACGCGGGCCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKCSCSL*TRASSW
Trigger: CCAGCTGCTGGCCCGCGTCAACAAGGAGCATGAGCA...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGATTGTGCTCATGCTCCTaGTTGACGCGGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRLCSCS*LTRASS
Trigger: GCTGCTGGCCCGCGTCAACAAGGAGCATGAGCACAA...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAACGAACCACCTTCAGCTaGTGCTCATGCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQRTTFS*CSCSLL
Trigger: CAACAAGGAGCATGAGCACAAGCTGAAGGTGGTTCG...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TCTCTGCTCTGCAGGCATGCACTTCACTCTTCAATCAAACCACCTTGTACACACCATCCACAGTGCACATaGTCTCCTTCCCCACATACA +
Preference number: 5 (lower is better)
Translates to: SLLCRHALHSSIKPPCTHHPQCT*SPSPHT
Trigger: TGTATGTGGGGAAGGAGACAATGTGCACTGTGGATG...GTGTGTACAAGGTGGTTTGATTGAAGAGTGAAGTGCATGCCTGCAGAGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTATGGGAACCAAGTGACTaGGTGGGCTGTCTAGGTCCT +
Preference number: 5 (lower is better)
Translates to: LLSDRFILPKLSSAELTLWEPSD*VGCLGP
Trigger: AGGACCTAGACAGCCCACCAAGTCACTTGGTTCCCA...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp AGGCCATCACCAGCAAGGGCCTTCTGCGTTGCATCTAGGAAAGACTCTTGGAGGTGTGGAATCTTTGGTTaGATCACATCCACATACCAT +
Preference number: 5 (lower is better)
Translates to: RPSPARAFCVASRKDSWRCGIFG*ITSTYH
Trigger: ATGGTATGTGGATGTGATCAAACCAAAGATTCCACA...CCTCCAAGAGTCTTTCCTAGATGCAACGCAGAAGGCCCTTGCTGGTGATGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp CTGAAGGGACTGGCAAAGATGAAAATGGCGGGTAATGCGAAGTTGCTGGTCTCTAAGTGTCAGAATGCTTaGGCACCAGCCACAAATACC +
Preference number: 5 (lower is better)
Translates to: LKGLAKMKMAGNAKLLVSKCQNA*APATNT
Trigger: GGTATTTGTGGCTGGTGCCAAAGCATTCTGACACTT...AGAGACCAGCAACTTCGCATTACCCGCCATTTTCATCTTTGCCAGTCCCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTAGGGCCTTTGGTTCGGTaGAGGCAAGAACAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: LLSDRFILPKLSSAELTLGPLVR*RQEQFV
Trigger: GACAAACTGTTCTTGCCTCAACCGAACCAAAGGCCC...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAAGGCCCGCTGGGCCTTaGGTTCGGTTGAGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILRPAGP*VRLRQE
Trigger: TTCTTGCCTCAACCGAACCAAAGGCCCAGCGGGCCT...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTTCGTGGCTGGAGTGTTaGCCCTCCTCCAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLSWLEC*PSSKHW
Trigger: CCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGA...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTATTGTGCTCATGCTCCTaGTTGACGCGGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILLCSCS*LTRASS
Trigger: GCTGCTGGCCCGCGTCAACAAGGAGCATGAGCACAA...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp ATCTTTGGTTTGATCACATCCACATACCATAGGCTCTCTAAAGGCAGGAGAGGACGAACCACCTTCAGCTaGTGCTCATGCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: IFGLITSTYHRLSKGRRGRTTFS*CSCSLL
Trigger: CAACAAGGAGCATGAGCACAAGCTGAAGGTGGTTCG...TCCTCTCCTGCCTTTAGAGAGCCTATGGTATGTGGATGTGATCAAACCAAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAAACGTAGCGCTGTTGTaGTGGGTACAACATTCCTCC +
Preference number: 5 (lower is better)
Translates to: QLILPYLPLQPHCLTESLNVALL*WVQHSS
Trigger: GGAGGAATGTTGTACCCACAACAACAGCGCTACGTT...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTGGGCTGACTCCTGTTTaGTTGAAGGCCTTGACCCGA +
Preference number: 5 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSGLTPV*LKALTR
Trigger: TCGGGTCAAGGCCTTCAACAAAACAGGAGTCAGCCC...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTTGGAGGACCAGGGTCTaGCTGTACGGGCTGACTCCT +
Preference number: 5 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLWRTRV*LYGLTP
Trigger: AGGAGTCAGCCCGTACAGCAAGACCCTGGTCCTCCA...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTCCCCCTACAACCTCATaGTTTGACAGAAAGCTTAAG +
Preference number: 5 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSPPTTS*FDRKLK
Trigger: CTTAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGG...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTCTCTCTTCGGTTGGATaGAACGGCCCTGGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SYVLLTSLRPSIKKVLMLLSSVG*NGPGQP
Trigger: AGGCTGCCCAGGGCCGTTCAATCCAACCGAAGAGAG...AAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAGCACATAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGATGCAGCTTATTTAGATaGTTATCAAAGGAAGCCGCC +
Preference number: 5 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRCSLFR*LSKEAA
Trigger: GGCGGCTTCCTTTGATAACAATCTAAATAAGCTGCA...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp TCTTTGATTAAAATGACACCCCAAAGTGTCAGAATGCTTTGGCACCAGCCACAACTGGTCTCTTCCTGTTaGGTGCCCACAGGAAGTCTC +
Preference number: 5 (lower is better)
Translates to: SLIKMTPQSVRMLWHQPQLVSSC*VPTGSL
Trigger: GAGACTTCCTGTGGGCACCAAACAGGAAGAGACCAG...TTGTGGCTGGTGCCAAAGCATTCTGACACTTTGGGGTGTCATTTTAATCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAGCCCTGGCGACACTCTaGGCTTCTTTCATCCTGCGT +
Preference number: 5 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKALATL*ASFILR
Trigger: ACGCAGGATGAAAGAAGCCAAGAGTGTCGCCAGGGC...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAAGATCGAAGCTCTCATaGGCCACCAGACCCGTCCGT +
Preference number: 5 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKRSKLS*ATRPVR
Trigger: ACGGACGGGTCTGGTGGCCAATGAGAGCTTCGATCT...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTGATGAGGGCATCACATaGGGCCACCAGACAGGCTTC +
Preference number: 5 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTDEGIT*GHQTGF
Trigger: GAAGCCTGTCTGGTGGCCCAATGTGATGCCCTCATC...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTTGGGCTTTTCTTCTGTaGAGGGCATCGATGAGGGCA +
Preference number: 5 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSWAFLL*RASMRA
Trigger: TGCCCTCATCGATGCCCTCAACAGAAGAAAAGCCCA...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAATGGGCTTTTCTTCTGTaGAGGGCATCGATGAGGGCA +
Preference number: 5 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEWAFLL*RASMRA
Trigger: TGCCCTCATCGATGCCCTCAACAGAAGAAAAGCCCA...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATATGCTCATGCTCCTTGTaGACGCGGGCCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSICSCSL*TRASSW
Trigger: CCAGCTGCTGGCCCGCGTCAACAAGGAGCATGAGCA...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTATACACCTCCCGGAATaGACCACCGTTGCCATCATC +
Preference number: 5 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSIHLPE*TTVAII
Trigger: GATGATGGCAACGGTGGTCAATTCCGGGAGGTGTAT...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGCTGACTCCTGTTTTGTaGAAGGCCTTGACCCGAGCG +
Preference number: 5 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLLTPVL*KALTRA
Trigger: CGCTCGGGTCAAGGCCTTCAACAAAACAGGAGTCAG...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGCCTCCCTCAGTTCTGTaGGTGTGCGAGTTGTTGTGC +
Preference number: 5 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLPPSVL*VCELLC
Trigger: GCACAACAACTCGCACACCAACAGAACTGAGGGAGG...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp CTTCTCAGTGATAGATTCATTCTCCCAAAGCTTAGCTCTGCAGAGCTAACGCTACTGAGAATGGGTCCTTaGCCCTCTGGTCACTCTTTT +
Preference number: 5 (lower is better)
Translates to: LLSDRFILPKLSSAELTLLRMGP*PSGHSF
Trigger: AAAAGAGTGACCAGAGGGCAAAGGACCCATTCTCAG...TAGCGTTAGCTCTGCAGAGCTAAGCTTTGGGAGAATGAATCTATCACTGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TGCTCTCAAACTGATAGGTCATCCCTGAGAGAAGGTGCTAAAATGATAATTCTGCTTACCCTCAGACGTTaGGAGGACCAGGGTCTTGCT +
Preference number: 5 (lower is better)
Translates to: CSQTDRSSLREGAKMIILLTLRR*EDQGLA
Trigger: AGCAAGACCCTGGTCCTCCAAACGTCTGAGGGTAAG...CAGAATTATCATTTTAGCACCTTCTCTCAGGGATGACCTATCAGTTTGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTACACGGGCATCTTGCATaGCACGCAGTACATGCTGTG +
Preference number: 5 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILHGHLA*HAVHAV
Trigger: CACAGCATGTACTGCGTGCAATGCAAGATGCCCGTG...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAATCTGCTGGACCATGTaGCGCAGCTGTACCAGAAAC +
Preference number: 5 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRICWTM*RSCTRN
Trigger: GTTTCTGGTACAGCTGCGCAACATGGTCCAGCAGAT...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp ACTGATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATCGAACCACCTTCAGCTaGTGCTCATGCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TDVSQTLITVPGTLKAFYRTTFS*CSCSLL
Trigger: CAACAAGGAGCATGAGCACAAGCTGAAGGTGGTTCG...ATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGATGCAGCAGAGGGCTGTaGTCCAGACTCAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRCSRGL*SRLKSK
Trigger: CTTTGACTTGAGTCTGGACAACAGCCCTCTGCTGCA...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTAGAGGAAGCTTTCACTaGCACGAAATCCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSRGSFH*HEIQLV
Trigger: CACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTCT...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGATACACCTCCCGGAATaGACCACCGTTGCCATCATC +
Preference number: 5 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLIHLPE*TTVAII
Trigger: GATGATGGCAACGGTGGTCAATTCCGGGAGGTGTAT...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTCTGACTCCTGTTTTGTaGAAGGCCTTGACCCGAGCG +
Preference number: 5 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLLTPVL*KALTRA
Trigger: CGCTCGGGTCAAGGCCTTCAACAAAACAGGAGTCAG...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp CAGCTCATTCTTCCCTACCTCCCCCTACAACCTCATTGTTTGACAGAAAGCTTAGGCTGTCTAGGTCCTTaGTTGGTTAGAATTGTTGGA +
Preference number: 5 (lower is better)
Translates to: QLILPYLPLQPHCLTESLGCLGP*LVRIVG
Trigger: TCCAACAATTCTAACCAACAAAGGACCTAGACAGCC...TAAGCTTTCTGTCAAACAATGAGGTTGTAGGGGGAGGTAGGGAAGAATGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp AATGCAGAGCAAGTCATGGAAACACTTCAGGAATGTGGGCAGTGGTGGGGTTACAGTACAGTTTCTTTGTaGGAAGAGAACTTGTTCCGT +
Preference number: 5 (lower is better)
Translates to: NAEQVMETLQECGQWWGYSTVSL*EENLFR
Trigger: ACGGAACAAGTTCTCTTCCAACAAAGAAACTGTACT...GTAACCCCACCACTGCCCACATTCCTGAAGTGTTTCCATGACTTGCTCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp TGGGCAAAACTGGCACATGATGTGTATCGGTGGAGAATGGGAGCCTGCTCTAGATACAGTACAGTTTCTTaGTTGGAAGAGAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: WAKLAHDVYRWRMGACSRYSTVS*LEENLF
Trigger: GAACAAGTTCTCTTCCAACAAAGAAACTGTACTGTA...TCTAGAGCAGGCTCCCATTCTCCACCGATACACATCATGTGCCAGTTTTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAGATCGAAGCTCTCATaGGCCACCAGACCCGTCCGT +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIRSKLS*ATRPVR
Trigger: ACGGACGGGTCTGGTGGCCAATGAGAGCTTCGATCT...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATCACGGGCATCTTGCATaGCACGCAGTACATGCTGTG +
Preference number: 5 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNHGHLA*HAVHAV
Trigger: CACAGCATGTACTGCGTGCAATGCAAGATGCCCGTG...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGATGTACCAGAAACTCCTaGGCTTCTTTGGCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRCTRNS*ASLALS
Trigger: AGACAGGGCCAAAGAAGCCAAGGAGTTTCTGGTACA...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TCTTTGTTGGAAGAGAACTTGTTCCGTTTGTTTCATCTAGAAAATGACCCCCAGTGTACCAGAAACTCCTaGGCTTCTTTGGCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: SLLEENLFRLFHLENDPQCTRNS*ASLALS
Trigger: AGACAGGGCCAAAGAAGCCAAGGAGTTTCTGGTACA...CTGGGGGTCATTTTCTAGATGAAACAAACGGAACAAGTTCTCTTCCAACAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAATCTGCTGGACCATGTaGCGCAGCTGTACCAGAAAC +
Preference number: 5 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILICWTM*RSCTRN
Trigger: GTTTCTGGTACAGCTGCGCAACATGGTCCAGCAGAT...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAGATGAGGGCATCACATaGGGCCACCAGACAGGCTTC +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIDEGIT*GHQTGF
Trigger: GAAGCCTGTCTGGTGGCCCAATGTGATGCCCTCATC...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAATGCAGCAGAGGGCTGTaGTCCAGACTCAAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKCSRGL*SRLKSK
Trigger: CTTTGACTTGAGTCTGGACAACAGCCCTCTGCTGCA...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGAACGTAGCGCTGTTGTaGTGGGTACAACATTCCTCC +
Preference number: 5 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLNVALL*WVQHSS
Trigger: GGAGGAATGTTGTACCCACAACAACAGCGCTACGTT...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TCTCAGGCACTCCTGAGCTTTGTTAAGTCATTCTATTTGTTTTCATGCCAGTTGGACAACGTAGCGCTGTaGTTGTGGGTACAACATTCC +
Preference number: 5 (lower is better)
Translates to: SQALLSFVKSFYLFSCQLDNVAL*LWVQHS
Trigger: GGAATGTTGTACCCACAACAACAGCGCTACGTTGTC...CAACTGGCATGAAAACAAATAGAATGACTTAACAAAGCTCAGGAGTGCCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp AAAAAGTTAGCAGGAGAATTTTCTCCTGGCGGTGCCAGTCCAGTAAGTCACCAATACATTGCCCAAGCTTaGTCGTCTTTTCCTAACATC +
Preference number: 5 (lower is better)
Translates to: KKLAGEFSPGGASPVSHQYIAQA*SSFPNI
Trigger: GATGTTAGGAAAAGACGACAAAGCTTGGGCAATGTA...TTGGTGACTTACTGGACTGGCACCGCCAGGAGAAAATTCTCCTGCTAACTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp CTGTGGACTGCAACTCAAGATCTCCCATTACTGAGAATGGGTCCTTTGCCCTCTAAATGCTATGGGACCTaGTTGTTCATCGTTGATAAA +
Preference number: 5 (lower is better)
Translates to: LWTATQDLPLLRMGPLPSKCYGT*LFIVDK
Trigger: TTTATCAACGATGAACAACAAGGTCCCATAGCATTT...AGAGGGCAAAGGACCCATTCTCAGTAATGGGAGATCTTGAGTTGCAGTCCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp GACAAGCATGTTTATCCTGAGAATGTGAATGCTGTGGACTGCAACTCAAGATCTCACATCCTTAGGCTATaGATGCTCTGCTGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: DKHVYPENVNAVDCNSRSHILRL*MLCWSR
Trigger: TCTACTCCAGCAGAGCATCAATAGCCTAAGGATGTG...AGATCTTGAGTTGCAGTCCACAGCATTCACATTCTCAGGATAAACATGCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAATTGCATCCCGGTGCATaGAGAGACTGTAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVELHPGA*RDCKEE
Trigger: TTCCTCTTTACAGTCTCTCAATGCACCGGGATGCAA...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TCTTTGTTGGAAGAGAACTTGTTCCGTTTGTTTCATCTAGAAAATGACCCCCAGCAAGGGCCTTCTGCGTaGCATCTAGGAAAGACTCTT +
Preference number: 5 (lower is better)
Translates to: SLLEENLFRLFHLENDPQQGPSA*HLGKTL
Trigger: AAGAGTCTTTCCTAGATGCAACGCAGAAGGCCCTTG...CTGGGGGTCATTTTCTAGATGAAACAAACGGAACAAGTTCTCTTCCAACAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAACTCCTTGGCTTCTTaGGCCCTGTCTGACAGTCCG +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSINSLAS*ALSDSP
Trigger: CGGACTGTCAGACAGGGCCAAAGAAGCCAAGGAGTT...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAATGTACCAGAAACTCCTaGGCTTCTTTGGCCCTGTCT +
Preference number: 5 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKCTRNS*ASLALS
Trigger: AGACAGGGCCAAAGAAGCCAAGGAGTTTCTGGTACA...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAGGAAGCCTGAAAGATCTTGACAACGTAGCGCTGTaGTTGTGGGTACAACATTCC +
Preference number: 5 (lower is better)
Translates to: YGQNVWIFSIILGSLKDLDNVAL*LWVQHS
Trigger: GGAATGTTGTACCCACAACAACAGCGCTACGTTGTC...AAGATCTTTCAGGCTTCCTAGAATGATGCTAAAAATCCACACATTCTGGCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACATCCACAGTGCACATaGTCTCCTTCCCCACATACA +
Preference number: 5 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKHPQCT*SPSPHT
Trigger: TGTATGTGGGGAAGGAGACAATGTGCACTGTGGATG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAGGGCTGACTCCTGTTTaGTTGAAGGCCTTGACCCGA +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIGLTPV*LKALTR
Trigger: TCGGGTCAAGGCCTTCAACAAAACAGGAGTCAGCCC...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTAACTGTCAGGTTGTCATaGGAGAGGATGATGTCCGAG +
Preference number: 5 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILTVRLS*ERMMSE
Trigger: CTCGGACATCATCCTCTCCAATGACAACCTGACAGT...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTACAGGTCACTGTCAGGTaGTCATTGGAGAGGATGATG +
Preference number: 5 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILQVTVR*SLERMM
Trigger: CATCATCCTCTCCAATGACAACCTGACAGTGACCTG...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATATGTGTCCTCAGACGTTaGGAGGACCAGGGTCTTGCT +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSICVLRR*EDQGLA
Trigger: AGCAAGACCCTGGTCCTCCAAACGTCTGAGGACACA...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAAGATTGTGTCTCAAAATaGCATCCCGGTGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEDCVSK*HPGALR
Trigger: TCTCAATGCACCGGGATGCAATTTTGAGACACAATC...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATCCTCTCCTTCATATCTaGGTCTGGGCCTTACGCTGT +
Preference number: 5 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNPLLHI*VWALRC
Trigger: ACAGCGTAAGGCCCAGACCAAGATATGAAGGAGAGG...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATGTTTTGTTGAAGGCCTaGACCCGAGCGTTGTATGTG +
Preference number: 5 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNVLLKA*TRALYV
Trigger: CACATACAACGCTCGGGTCAAGGCCTTCAACAAAAC...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp GAGCCAAACAAGAGTGCAGAGAAGATGCTCAGATTTTCTGATAATGATACTAATACTGTCAGGTTGTCATaGGAGAGGATGATGTCCGAG +
Preference number: 5 (lower is better)
Translates to: EPNKSAEKMLRFSDNDTNTVRLS*ERMMSE
Trigger: CTCGGACATCATCCTCTCCAATGACAACCTGACAGT...ATTAGTATCATTATCAGAAAATCTGAGCATCTTCTCTGCACTCTTGTTTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATATGCTGGGACTTTCACTaGCACGAAATCCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSICWDFH*HEIQLV
Trigger: CACCAGCTGGATTTCGTGCAAGTGAAAGTCCCAGCA...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATACATCCACAGTGCACATaGTCTCCTTCCCCACATACA +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIHPQCT*SPSPHT
Trigger: TGTATGTGGGGAAGGAGACAATGTGCACTGTGGATG...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATACAGGTCACTGTCAGGTaGTCATTGGAGAGGATGATG +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIQVTVR*SLERMM
Trigger: CATCATCCTCTCCAATGACAACCTGACAGTGACCTG...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGATACATTGCCCAAGCTTaGTCGTCTTTTCCTAACATC +
Preference number: 5 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRYIAQA*SSFPNI
Trigger: GATGTTAGGAAAAGACGACAAAGCTTGGGCAATGTA...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp CCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAAACTTGTTGGTTAGAATTGTaGGACATGGAAGCGGAAGCA +
Preference number: 5 (lower is better)
Translates to: PDVNLCSGYFCASMSSKTCWLEL*DMEAEA
Trigger: TGCTTCCGCTTCCATGTCCAACAATTCTAACCAACA...AGTTTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp GATGTATCCCAGACACTTATAACTGTGCCTGGCACATTAAAGGCATTCTATAGAAGAGTAAGGTGCAGATaGTGTCTCAAAATTGCATCC +
Preference number: 5 (lower is better)
Translates to: DVSQTLITVPGTLKAFYRRVRCR*CLKIAS
Trigger: GGATGCAATTTTGAGACACAATCTGCACCTTACTCT...TCTATAGAATGCCTTTAATGTGCCAGGCACAGTTATAAGTGTCTGGGATACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp CTATTAACTAGTCTGCGTCCAAGTATAAAGAAGGTGCTTATGCTTGGCGTGGAAAAATGCTATGGGACCTaGTTGTTCATCGTTGATAAA +
Preference number: 5 (lower is better)
Translates to: LLTSLRPSIKKVLMLGVEKCYGT*LFIVDK
Trigger: TTTATCAACGATGAACAACAAGGTCCCATAGCATTT...TTCCACGCCAAGCATAAGCACCTTCTTTATACTTGGACGCAGACTAGTTAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp TACCCTGATGTGAACCTGTGTAGCGGATATTTTTGTGCTTCAATGAGTAGTAAACTTTGTTGGTTAGAATaGTTGGACATGGAAGCGGAA +
Preference number: 5 (lower is better)
Translates to: YPDVNLCSGYFCASMSSKLCWLE*LDMEAE
Trigger: TTCCGCTTCCATGTCCAACAATTCTAACCAACAAAG...TTTACTACTCATTGAAGCACAAAAATATCCGCTACACAGGTTCACATCAGGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TTGGTACATTTCTGGTGCTATGGCCAGAATGTGTGGATTTTTAGCATCATTCTATGTCTAGGTCCTTTGTaGGTTAGAATTGTTGGACAT +
Preference number: 5 (lower is better)
Translates to: LVHFWCYGQNVWIFSIILCLGPL*VRIVGH
Trigger: ATGTCCAACAATTCTAACCAACAAAGGACCTAGACA...TAGAATGATGCTAAAAATCCACACATTCTGGCCATAGCACCAGAAATGTACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS-3UTR CAA 90 bp TGCTCTCAAACTGATAGGTCATCCCTGAGAGAAGGTGCTAAAATGATAATTCTGTTGTTGGAAGAGAACTaGTTCCGTTTGTTTCATCTA +
Preference number: 5 (lower is better)
Translates to: CSQTDRSSLREGAKMIILLLEEN*FRLFHL
Trigger: TAGATGAAACAAACGGAACAAGTTCTCTTCCAACAA...CAGAATTATCATTTTAGCACCTTCTCTCAGGGATGACCTATCAGTTTGAGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATAAGAAGGTGCTTATGCTaGGCGTGGAATAAAATAAGT +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSIRRCLC*AWNKIS
Trigger: ACTTATTTTATTCCACGCCAAGCATAAGCACCTTCT...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS-3UTR CAA 90 bp ATGAAGAGAATTCTAGTTTCCTATGTGCTATTAACTAGTCTGCGTCCAAGTATATTGTTTTCATGCCAGTaGGTTAAAGGCTTTCGTTTC +
Preference number: 5 (lower is better)
Translates to: MKRILVSYVLLTSLRPSILFSCQ*VKGFRF
Trigger: GAAACGAAAGCCTTTAACCAACTGGCATGAAAACAA...TATACTTGGACGCAGACTAGTTAATAGCACATAGGAAACTAGAATTCTCTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS CCA 72 bp GCGAGGTGGCCGACGGGCCCGTCTTGTCCAGCACCCTaGCCAGCGGCGGCGGCTGTGGTGGTGGTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: ARWPTGPSCPAP*PAAAAVVVVPS
Trigger: GGAAGGCACCACCACCACAGCCGCCGCCGCTGGCCAGGGTGCTGGACAAGACGGGCCCGTCGGCCACCTCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS GCA 72 bp CAGCACCCTGGCCAGCGGCGGCGGCTGTGGTGGTGGTaGCTTCCCGCGCAGCACTGGCACGGACACCCAGAG +
Preference number: 6 (lower is better)
Translates to: QHPGQRRRLWWW*LPAQHWHGHPE
Trigger: CTCTGGGTGTCCGTGCCAGTGCTGCGCGGGAAGGCACCACCACCACAGCCGCCGCCGCTGGCCAGGGTGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000684578.1
CDS CCA 72 bp CAGCGACGGCTGCAGCGGGTGCCTGAGCTGGCGAGGTaGCCGACGGGCCCGTCTTGTCCAGCACCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: QRRLQRVPELAR*PTGPSCPAPWP
Trigger: TGGCCAGGGTGCTGGACAAGACGGGCCCGTCGGCCACCTCGCCAGCTCAGGCACCCGCTGCAGCCGTCGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CCA 72 bp ACCTTGCGTGGGCTCAGCCTCCGGCTCACACGACCCTaGGCCGGGGGCACCAGGCGGTGCTTGGCTAGGGGC +
Preference number: 6 (lower is better)
Translates to: TLRGLSLRLTRP*AGGTRRCLARG
Trigger: GCCCCTAGCCAAGCACCGCCTGGTGCCCCCGGCCCAGGGTCGTGTGAGCCGGAGGCTGAGCCCACGCAAGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS TCA 72 bp GACGCCGTGCCCTGGAGCTCCCCCATCCCGGGAGTCTaGCGGCGCTGGCGCAAGCCCTGGCGACACTCTTGG +
Preference number: 6 (lower is better)
Translates to: DAVPWSSPIPGV*RRWRKPWRHSW
Trigger: CCAAGAGTGTCGCCAGGGCTTGCGCCAGCGCCGTCAGACTCCCGGGATGGGGGAGCTCCAGGGCACGGCGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS TCA 72 bp GTCTGGGAGGAGACAGCGACGGCTGCAGCGGGTGCCTaGGCTGGCGAGGTGGCCGACGGGCCCGTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: VWEETATAAAGA*AGEVADGPVLS
Trigger: GGACAAGACGGGCCCGTCGGCCACCTCGCCAGCTCAGGCACCCGCTGCAGCCGTCGCTGTCTCCTCCCAGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CCA 72 bp CTTGTCCAGCACCCTGGCCAGCGGCGGCGGCTGTGGTaGTGGTGCCTTCCCGCGCAGCACTGGCACGGACAC +
Preference number: 6 (lower is better)
Translates to: LVQHPGQRRRLW*WCLPAQHWHGH
Trigger: GTGTCCGTGCCAGTGCTGCGCGGGAAGGCACCACCACCACAGCCGCCGCCGCTGGCCAGGGTGCTGGACAAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000684578.1
CDS CAA 90 bp AGTGGGCTGCCGGAGGGGGCTGGGGCTTCTCGCCAGCGTTTGCGTTaGGCTCCCAGCTCTGAGCTCCGCGCCCACCTACCGCGGGCGAGT +
Preference number: 6 (lower is better)
Translates to: SGLPEGAGASRQRLR*APSSELRAHLPRAS
Trigger: ACTCGCCCGCGGTAGGTGGGCGCGGAGCTCAGAGCTGGGAGCCAAACGCAAACGCTGGCGAGAAGCCCCAGCCCCCTCCGGCAGCCCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CCA 72 bp TGCGCAGCACGGAGGACGCCCCTTCTCTTCCGCTGCTaGCAGCCTTCGCAGGCGTCTCACCCGGGCCTAGGC +
Preference number: 6 (lower is better)
Translates to: CAARRTPLLFRC*QPSQASHPGLG
Trigger: GCCTAGGCCCGGGTGAGACGCCTGCGAAGGCTGCCAGCAGCGGAAGAGAAGGGGCGTCCTCCGTGCTGCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CCA 72 bp CGGAGGGGGCTGGGGCTTCTCGCCAGCGTTTGCGTTTaGCTCCCAGCTCTGAGCTCCGCGCCCACCTACCGC +
Preference number: 6 (lower is better)
Translates to: RRGLGLLASVCV*LPALSSAPTYR
Trigger: GCGGTAGGTGGGCGCGGAGCTCAGAGCTGGGAGCCAAACGCAAACGCTGGCGAGAAGCCCCAGCCCCCTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CAA 72 bp CCGGAGGGGGCTGGGGCTTCTCGCCAGCGTTTGCGTTaGGCTCCCAGCTCTGAGCTCCGCGCCCACCTACCG +
Preference number: 6 (lower is better)
Translates to: PEGAGASRQRLR*APSSELRAHLP
Trigger: CGGTAGGTGGGCGCGGAGCTCAGAGCTGGGAGCCAAACGCAAACGCTGGCGAGAAGCCCCAGCCCCCTCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS TCA 72 bp GGCTTCTCGCCAGCGTTTGCGTTTGGCTCCCAGCTCTaGGCTCCGCGCCCACCTACCGCGGGCGAGTGCTGC +
Preference number: 6 (lower is better)
Translates to: GFSPAFAFGSQL*APRPPTAGECC
Trigger: GCAGCACTCGCCCGCGGTAGGTGGGCGCGGAGCTCAGAGCTGGGAGCCAAACGCAAACGCTGGCGAGAAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CCA 72 bp CTCCAGCTCGTGGTCTGTGCAGGTGGAGACCTTGCGTaGGCTCAGCCTCCGGCTCACACGACCCTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: LQLVVCAGGDLA*AQPPAHTTLGR
Trigger: CCGGCCCAGGGTCGTGTGAGCCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CAA 90 bp TACATGCTGTGGTTCTCCAGCTCGTGGTCTGTGCAGGTGGAGACCTaGCGTGGGCTCAGCCTCCGGCTCACACGACCCTGGGCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: YMLWFSSSWSVQVET*RGLSLRLTRPWAGG
Trigger: GCCCCCGGCCCAGGGTCGTGTGAGCCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS GCA 72 bp GGTTCTCCAGCTCGTGGTCTGTGCAGGTGGAGACCTTaGGTGGGCTCAGCCTCCGGCTCACACGACCCTGGG +
Preference number: 6 (lower is better)
Translates to: GSPARGLCRWRP*VGSASGSHDPG
Trigger: CCCAGGGTCGTGTGAGCCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CAA 72 bp TGGTTCTCCAGCTCGTGGTCTGTGCAGGTGGAGACCTaGCGTGGGCTCAGCCTCCGGCTCACACGACCCTGG +
Preference number: 6 (lower is better)
Translates to: WFSSSWSVQVET*RGLSLRLTRPW
Trigger: CCAGGGTCGTGTGAGCCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS TCA 72 bp CCTTCTTCCTCCTCGCGGCCTCCCAAAGCACCTGGCTaGGCTTTTTCGAGGCCCGCTGGGCCTTTGGTTCGG +
Preference number: 6 (lower is better)
Translates to: PSSSSRPPKAPG*AFSRPAGPLVR
Trigger: CCGAACCAAAGGCCCAGCGGGCCTCGAAAAAGCTCAGCCAGGTGCTTTGGGAGGCCGCGAGGAGGAAGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS TCA 72 bp TGGCTTCCTTGGGCGCCTTCTCGCAGAGCTGGCACTTaGGGGCCGCGGCTTTGCTCTGCTGGTAGCGGTCAA +
Preference number: 6 (lower is better)
Translates to: WLPWAPSRRAGT*GPRLCSAGSGQ
Trigger: TTGACCGCTACCAGCAGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGCGAGAAGGCGCCCAAGGAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS GCA 72 bp GTAGAGTCTGAGGATAGGGCAGTCTTCGCTCGCGGCTaGAAGATCTCTGAAGGGGGCCGGCGTGCGGAGGCT +
Preference number: 6 (lower is better)
Translates to: VESEDRAVFARG*KISEGGRRAEA
Trigger: AGCCTCCGCACGCCGGCCCCCTTCAGAGATCTTGCAGCCGCGAGCGAAGACTGCCCTATCCTCAGACTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS GCA 72 bp CAGCCTTCGCAGGCGTCTCACCCGGGCCTAGGCTTCTaGACGGCAGTGGGGCTTTTCTCCTTCTCCGTGAAT +
Preference number: 6 (lower is better)
Translates to: QPSQASHPGLGF*TAVGLFSFSVN
Trigger: ATTCACGGAGAAGGAGAAAAGCCCCACTGCCGTGCAGAAGCCTAGGCCCGGGTGAGACGCCTGCGAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CCA 72 bp ACATGCTGTGGTTCTCCAGCTCGTGGTCTGTGCAGGTaGAGACCTTGCGTGGGCTCAGCCTCCGGCTCACAC +
Preference number: 6 (lower is better)
Translates to: TCCGSPARGLCR*RPCVGSASGSH
Trigger: GTGTGAGCCGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS GCA 72 bp GCGCCTCCACGGCACATCCTTAGGCTATTGATGCTCTaGTGGAGTAGAAGTCGGGGACTGGGAGCCCGGTGT +
Preference number: 6 (lower is better)
Translates to: APPRHILRLLML*WSRSRGLGARC
Trigger: ACACCGGGCTCCCAGTCCCCGACTTCTACTCCAGCAGAGCATCAATAGCCTAAGGATGTGCCGTGGAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298355.7
ENST00000684578.1
CDS GCA 72 bp GGCAGACAGGGGCACGTCCTGGGAGTTGGTACTCTCTaGACCAGAAGCAGACGGAGGACACACGACCGATTC +
Preference number: 6 (lower is better)
Translates to: GRQGHVLGVGTL*TRSRRRTHDRF
Trigger: GAATCGGTCGTGTGTCCTCCGTCTGCTTCTGGTGCAGAGAGTACCAACTCCCAGGACGTGCCCCTGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555170.1
CDS CCA 72 bp ACACGGGGCATTTCAACTCCTCTTCCATCTCCTCCATaGGGACCGGTCTGGGAGGAGACAGCGACGGCTGCA +
Preference number: 6 (lower is better)
Translates to: TRGISTPLPSPP*GPVWEETATAA
Trigger: TGCAGCCGTCGCTGTCTCCTCCCAGACCGGTCCCCATGGAGGAGATGGAAGAGGAGTTGAAATGCCCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CAA 90 bp GGTAAGAACAGGCAGCTGGCGCCTCCACGGCACATCCTTAGGCTATaGATGCTCTGCTGGAGTAGAAGTCGGGGACTGGGAGCCCGGTGT +
Preference number: 6 (lower is better)
Translates to: GKNRQLAPPRHILRL*MLCWSRSRGLGARC
Trigger: ACACCGGGCTCCCAGTCCCCGACTTCTACTCCAGCAGAGCATCAATAGCCTAAGGATGTGCCGTGGAGGCGCCAGCTGCCTGTTCTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298355.7
ENST00000684578.1
CDS CCA 72 bp CCTCCACGGCACATCCTTAGGCTATTGATGCTCTGCTaGAGTAGAAGTCGGGGACTGGGAGCCCGGTGTGCA +
Preference number: 6 (lower is better)
Translates to: PPRHILRLLMLC*SRSRGLGARCA
Trigger: TGCACACCGGGCTCCCAGTCCCCGACTTCTACTCCAGCAGAGCATCAATAGCCTAAGGATGTGCCGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298355.7
ENST00000684578.1
CDS CAA 72 bp AGGCAGCTGGCGCCTCCACGGCACATCCTTAGGCTATaGATGCTCTGCTGGAGTAGAAGTCGGGGACTGGGA +
Preference number: 6 (lower is better)
Translates to: RQLAPPRHILRL*MLCWSRSRGLG
Trigger: TCCCAGTCCCCGACTTCTACTCCAGCAGAGCATCAATAGCCTAAGGATGTGCCGTGGAGGCGCCAGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298355.7
ENST00000684578.1
CDS CAA 72 bp TCAGGAATGTGGGCAGTGGTGGGGTTACCTCCGGGCTaGCCAGCCACTTTAGATGCCACGCAGTTCTCGCTC +
Preference number: 6 (lower is better)
Translates to: SGMWAVVGLPPG*PATLDATQFSL
Trigger: GAGCGAGAACTGCGTGGCATCTAAAGTGGCTGGCAAGCCCGGAGGTAACCCCACCACTGCCCACATTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS CAA 90 bp CATCCCGGGAGTCTGACGGCGCTGGCGCAAGCCCTGGCGACACTCTaGGCTTCTTTCATCCTGCGTCCCTCGTTTCCTAAAGAGCATGTA +
Preference number: 6 (lower is better)
Translates to: HPGSLTALAQALATL*ASFILRPSFPKEHV
Trigger: TACATGCTCTTTAGGAAACGAGGGACGCAGGATGAAAGAAGCCAAGAGTGTCGCCAGGGCTTGCGCCAGCGCCGTCAGACTCCCGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CAA 90 bp TCATGCTCCTTGTTGACGCGGGCCAGCAGCTGGGCTTTTCTTCTGTaGAGGGCATCGATGAGGGCATCACATTGGGCCACCAGACAGGCT +
Preference number: 6 (lower is better)
Translates to: SCSLLTRASSWAFLL*RASMRASHWATRQA
Trigger: AGCCTGTCTGGTGGCCCAATGTGATGCCCTCATCGATGCCCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGTCAACAAGGAGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS TCA 72 bp ACGGATCGCAGTAGAAGACATCGCACTGTTCGCACATaGCGGTGGCTTCCTTGGGCGCCTTCTCGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: TDRSRRHRTVRT*RWLPWAPSRRA
Trigger: AGCTCTGCGAGAAGGCGCCCAAGGAAGCCACCGTCATGTGCGAACAGTGCGATGTCTTCTACTGCGATCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS GCA 72 bp GGTAGCACACGGGCATCTTGCATTGCACGCAGTACATaGTGTGGTTCTCCAGCTCGTGGTCTGTGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: GSTRASCIARST*CGSPARGLCRW
Trigger: CCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTACTGCGTGCAATGCAAGATGCCCGTGTGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS GCA 72 bp GGTGGGGTTACCTCCGGGCTTGCCAGCCACTTTAGATaGCACGCAGTTCTCGCTCTGAGGGATACTGCTGAA +
Preference number: 6 (lower is better)
Translates to: GGVTSGLASHFR*HAVLALRDTAE
Trigger: TTCAGCAGTATCCCTCAGAGCGAGAACTGCGTGGCATCTAAAGTGGCTGGCAAGCCCGGAGGTAACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS CCA 72 bp GTCAGCTTCCCTCTCTTCGGTTGGATTGAACGGCCCTaGGCAGCCTTTGAACCGGTAGCCAGCAACAGCTGT +
Preference number: 6 (lower is better)
Translates to: VSFPLFGWIERP*AAFEPVASNSC
Trigger: ACAGCTGTTGCTGGCTACCGGTTCAAAGGCTGCCCAGGGCCGTTCAATCCAACCGAAGAGAGGGAAGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS CCA 72 bp TCTGGGCCTTACGCTGTCAGCTTCCCTCTCTTCGGTTaGATTGAACGGCCCTGGGCAGCCTTTGAACCGGTA +
Preference number: 6 (lower is better)
Translates to: SGPYAVSFPLFG*IERPWAAFEPV
Trigger: TACCGGTTCAAAGGCTGCCCAGGGCCGTTCAATCCAACCGAAGAGAGGGAAGCTGACAGCGTAAGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS CAA 72 bp TTGTTGACGCGGGCCAGCAGCTGGGCTTTTCTTCTGTaGAGGGCATCGATGAGGGCATCACATTGGGCCACC +
Preference number: 6 (lower is better)
Translates to: LLTRASSWAFLL*RASMRASHWAT
Trigger: GGTGGCCCAATGTGATGCCCTCATCGATGCCCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGTCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS TCA 72 bp ATTATAGCTCGGCCCAGAGGCCTCAGTGCCGTGGTGTaGACGTGCTTCCTTCCACGGATCCTTCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: IIARPRGLSAVV*TCFLPRILLPP
Trigger: AGGAGGAAGAAGGATCCGTGGAAGGAAGCACGTTCACACCACGGCACTGAGGCCTCTGGGCCGAGCTATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS GCA 72 bp CAACAGCTGTTTAACCTCAGGGGCAGGGTGCTTACCTaGACGTTCCTGTTCAGGCTGACCGCAGGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: QQLFNLRGRVLT*TFLFRLTAGKK
Trigger: CTTCTTCCCTGCGGTCAGCCTGAACAGGAACGTGCAGGTAAGCACCCTGCCCCTGAGGTTAAACAGCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS CCA 72 bp TTGTGCTCATGCTCCTTGTTGACGCGGGCCAGCAGCTaGGCTTTTCTTCTGTTGAGGGCATCGATGAGGGCA +
Preference number: 6 (lower is better)
Translates to: LCSCSLLTRASS*AFLLLRASMRA
Trigger: TGCCCTCATCGATGCCCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGTCAACAAGGAGCATGAGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CCA 72 bp CAGAATGTATCCATCGGCGGGCACCGTGGACAGAGGTaGCTGTTTCCAGGACAACGTAGCGCTGTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: QNVSIGGHRGQR*LFPGQRSAVVV
Trigger: CACAACAACAGCGCTACGTTGTCCTGGAAACAGCCACCTCTGTCCACGGTGCCCGCCGATGGATACATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CAA 72 bp AACCAGGCCACCTCAGACGTTTGGAGGACCAGGGTCTaGCTGTACGGGCTGACTCCTGTTTTGTTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: NQATSDVWRTRV*LYGLTPVLLKA
Trigger: GGCCTTCAACAAAACAGGAGTCAGCCCGTACAGCAAGACCCTGGTCCTCCAAACGTCTGAGGTGGCCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CAA 72 bp AGGGCCTTACCCTCAGACGTTTGGAGGACCAGGGTCTaGCTGTACGGGCTGACTCCTGTTTTGTTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: RALPSDVWRTRV*LYGLTPVLLKA
Trigger: GGCCTTCAACAAAACAGGAGTCAGCCCGTACAGCAAGACCCTGGTCCTCCAAACGTCTGAGGGTAAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS CAA 90 bp ACCGTGGACAGAGGTGGCTGTTTCCAGGACAACGTAGCGCTGTTGTaGTGGGTACAACATTCCTCCAGCTGTAGGATAGGGGTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: TVDRGGCFQDNVALL*WVQHSSSCRIGVAG
Trigger: CCCAGCAACCCCTATCCTACAGCTGGAGGAATGTTGTACCCACAACAACAGCGCTACGTTGTCCTGGAAACAGCCACCTCTGTCCACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CAA 90 bp GGCACCGTGGACAGAGGTGGCTGTTTCCAGGACAACGTAGCGCTGTaGTTGTGGGTACAACATTCCTCCAGCTGTAGGATAGGGGTTGCT +
Preference number: 6 (lower is better)
Translates to: GTVDRGGCFQDNVAL*LWVQHSSSCRIGVA
Trigger: AGCAACCCCTATCCTACAGCTGGAGGAATGTTGTACCCACAACAACAGCGCTACGTTGTCCTGGAAACAGCCACCTCTGTCCACGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS TCA 72 bp TTGCCAGCCACTTTAGATGCCACGCAGTTCTCGCTCTaGGGGATACTGCTGAAGGGCCTTACCCTCAGACGT +
Preference number: 6 (lower is better)
Translates to: LPATLDATQFSL*GILLKGLTLRR
Trigger: ACGTCTGAGGGTAAGGCCCTTCAGCAGTATCCCTCAGAGCGAGAACTGCGTGGCATCTAAAGTGGCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360392.4
CDS CCA 72 bp TCCCAAAGCACCTGGCTGAGCTTTTTCGAGGCCCGCTaGGCCTTTGGTTCGGTTGAGGCAAGAACAGTTTGT +
Preference number: 6 (lower is better)
Translates to: SQSTWLSFFEAR*AFGSVEARTVC
Trigger: ACAAACTGTTCTTGCCTCAACCGAACCAAAGGCCCAGCGGGCCTCGAAAAAGCTCAGCCAGGTGCTTTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS CCA 72 bp GGGGTTGCTGGGACTTTCACTTGCACGAAATCCAGCTaGTGGATGGATTGCAGCAGAGGGCTGTTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: GVAGTFTCTKSS*WMDCSRGLLSR
Trigger: TCTGGACAACAGCCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCAAGTGAAAGTCCCAGCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS CAA 72 bp TCTCGAACCACCTTCAGCTTGTGCTCATGCTCCTTGTaGACGCGGGCCAGCAGCTGGGCTTTTCTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: SRTTFSLCSCSL*TRASSWAFLLL
Trigger: CAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGTCAACAAGGAGCATGAGCACAAGCTGAAGGTGGTTCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CAA 72 bp AGGACCAGGGTCTTGCTGTACGGGCTGACTCCTGTTTaGTTGAAGGCCTTGACCCGAGCGTTGTATGTGCTG +
Preference number: 6 (lower is better)
Translates to: RTRVLLYGLTPV*LKALTRALYVL
Trigger: CAGCACATACAACGCTCGGGTCAAGGCCTTCAACAAAACAGGAGTCAGCCCGTACAGCAAGACCCTGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS TCA 72 bp GAGCTTTTTCGAGGCCCGCTGGGCCTTTGGTTCGGTTaGGGCAAGAACAGTTTGTCTATTTCTGAGTGCCCG +
Preference number: 6 (lower is better)
Translates to: ELFRGPLGLWFG*GKNSLSISECP
Trigger: CGGGCACTCAGAAATAGACAAACTGTTCTTGCCTCAACCGAACCAAAGGCCCAGCGGGCCTCGAAAAAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS TCA 72 bp GTGGTCATCCTTGGAGTGAGTGTGCCTTTACCCCACTaGTCCTCAGTCAGGTGCACTCTTCTTATGAGGGCG +
Preference number: 6 (lower is better)
Translates to: VVILGVSVPLPH*SSVRCTLLMRA
Trigger: CGCCCTCATAAGAAGAGTGCACCTGACTGAGGATCAGTGGGGTAAAGGCACACTCACTCCAAGGATGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS TCA 72 bp CAACAAGCTCAGCACCATAACATACTCCTGGGCGGGTaGGGAGCGTTGTGTAGCGTTTTCATGCTGCCATGC +
Preference number: 6 (lower is better)
Translates to: QQAQHHNILLGG*GALCSVFMLPC
Trigger: GCATGGCAGCATGAAAACGCTACACAACGCTCCTCACCCGCCCAGGAGTATGTTATGGTGCTGAGCTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555170.1
CDS CCA 72 bp GTTGCTGGGACTTTCACTTGCACGAAATCCAGCTGGTaGATGGATTGCAGCAGAGGGCTGTTGTCCAGACTC +
Preference number: 6 (lower is better)
Translates to: VAGTFTCTKSSW*MDCSRGLLSRL
Trigger: GAGTCTGGACAACAGCCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCAAGTGAAAGTCCCAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS CCA 72 bp GACAGACCCAACAAGCTCAGCACCATAACATACTCCTaGGCGGGTGAGGAGCGTTGTGTAGCGTTTTCATGC +
Preference number: 6 (lower is better)
Translates to: DRPNKLSTITYS*AGEERCVAFSC
Trigger: GCATGAAAACGCTACACAACGCTCCTCACCCGCCCAGGAGTATGTTATGGTGCTGAGCTTGTTGGGTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555170.1
CDS CCA 72 bp GTGCGCCGAGCCAGGGTCGAAAGCAAACCAGGCCACTaGGAACAACAGAAGGGAATCAGGTTATTAAGACAG +
Preference number: 6 (lower is better)
Translates to: VRRARVESKPGH*EQQKGIRLLRQ
Trigger: CTGTCTTAATAACCTGATTCCCTTCTGTTGTTCCCAGTGGCCTGGTTTGCTTTCGACCCTGGCTCGGCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555170.1
CDS CAA 72 bp ACCAGGGTCTTGCTGTACGGGCTGACTCCTGTTTTGTaGAAGGCCTTGACCCGAGCGTTGTATGTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: TRVLLYGLTPVL*KALTRALYVLL
Trigger: CAACAGCACATACAACGCTCGGGTCAAGGCCTTCAACAAAACAGGAGTCAGCCCGTACAGCAAGACCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CAA 72 bp GAATCTGTGTCCTCAGACGTTTGGAGGACCAGGGTCTaGCTGTACGGGCTGACTCCTGTTTTGTTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: ESVSSDVWRTRV*LYGLTPVLLKA
Trigger: GGCCTTCAACAAAACAGGAGTCAGCCCGTACAGCAAGACCCTGGTCCTCCAAACGTCTGAGGACACAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338969.9
ENST00000684578.1
CDS CCA 72 bp ACTGGAGAGGAAGCTTTCACTTGCACGAAATCCAGCTaGTGGATGGATTGCAGCAGAGGGCTGTTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: TGEEAFTCTKSS*WMDCSRGLLSR
Trigger: TCTGGACAACAGCCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTCTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298355.7
ENST00000360392.4
ENST00000684578.1
CDS CAA 90 bp AAGTTGCCAGTGCTGATCCCTTTCTCTCCTCCTCTCCTTCATATCTaGGTCTGGGCCTTACGCTGTCAGCTTCCCTCTCTTCGGTTGGAT +
Preference number: 6 (lower is better)
Translates to: KLPVLIPFSPPLLHI*VWALRCQLPSLRLD
Trigger: ATCCAACCGAAGAGAGGGAAGCTGACAGCGTAAGGCCCAGACCAAGATATGAAGGAGAGGAGGAGAGAAAGGGATCAGCACTGGCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338969.9
CDS GCA 72 bp CGCAAGCCCTGGCGACACTCTTGGCTTCTTTCATCCTaGGTCCCTCGTTTCCTAAAGAGCATGTATAAAGTC +
Preference number: 6 (lower is better)
Translates to: RKPWRHSWLLSS*VPRFLKSMYKV
Trigger: GACTTTATACATGCTCTTTAGGAAACGAGGGACGCAGGATGAAAGAAGCCAAGAGTGTCGCCAGGGCTTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298355.7
CDS GCA 72 bp CGTCTTTTCCTAACATCACATCCTTCATCACGTCCATaGGAGCCACACCAAAGGCAGGATCAGGGTGGTTGT +
Preference number: 6 (lower is better)
Translates to: RLFLTSHPSSRP*EPHQRQDQGGC
Trigger: ACAACCACCCTGATCCTGCCTTTGGTGTGGCTCGCATGGACGTGATGAAGGATGTGATGTTAGGAAAAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000555170.1
ENST00000684578.1
CDS CCA 72 bp TTTCTTCTGTTGAGGGCATCGATGAGGGCATCACATTaGGCCACCAGACAGGCTTCAAACTCCACACTGTTC +
Preference number: 6 (lower is better)
Translates to: FLLLRASMRASH*ATRQASNSTLF
Trigger: GAACAGTGTGGAGTTTGAAGCCTGTCTGGTGGCCCAATGTGATGCCCTCATCGATGCCCTCAACAGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CAA 72 bp GACAGAGGTGGCTGTTTCCAGGACAACGTAGCGCTGTaGTTGTGGGTACAACATTCCTCCAGCTGTAGGATA +
Preference number: 6 (lower is better)
Translates to: DRGGCFQDNVAL*LWVQHSSSCRI
Trigger: TATCCTACAGCTGGAGGAATGTTGTACCCACAACAACAGCGCTACGTTGTCCTGGAAACAGCCACCTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS CAA 72 bp TTTTCTTCTGTTGAGGGCATCGATGAGGGCATCACATaGGGCCACCAGACAGGCTTCAAACTCCACACTGTT +
Preference number: 6 (lower is better)
Translates to: FSSVEGIDEGIT*GHQTGFKLHTV
Trigger: AACAGTGTGGAGTTTGAAGCCTGTCTGGTGGCCCAATGTGATGCCCTCATCGATGCCCTCAACAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298355.7
ENST00000338969.9
ENST00000360392.4
ENST00000684578.1
CDS GCA 72 bp CTGCTATTATGTCCCCGTGCACGGTTCCCCAAGACCTaGCTTAACAATGCATTCATACAAAGCCTCATCTTT +
Preference number: 6 (lower is better)
Translates to: LLLCPRARFPKT*LNNAFIQSLIF
Trigger: AAAGATGAGGCTTTGTATGAATGCATTGTTAAGGCAGGTCTTGGGGAACCGTGCACGGGGACATAATAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555933.1
CDS CAA 90 bp AGATCAGGACCCAAGACCAGAGGACACCTCGAACAACAAAGGCAATaGTTGTCACTTTCCCGATTTTTAGTGGTAGAAAATTGGAAGGTT +
Preference number: 6 (lower is better)
Translates to: RSGPKTRGHLEQQRQ*LSLSRFLVVENWKV
Trigger: AACCTTCCAATTTTCTACCACTAAAAATCGGGAAAGTGACAACAATTGCCTTTGTTGTTCGAGGTGTCCTCTGGTCTTGGGTCCTGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555933.1
CDS CAA 72 bp CCCAAGACCAGAGGACACCTCGAACAACAAAGGCAATaGTTGTCACTTTCCCGATTTTTAGTGGTAGAAAAT +
Preference number: 6 (lower is better)
Translates to: PKTRGHLEQQRQ*LSLSRFLVVEN
Trigger: ATTTTCTACCACTAAAAATCGGGAAAGTGACAACAATTGCCTTTGTTGTTCGAGGTGTCCTCTGGTCTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555933.1