RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM71 (Homo sapiens)

Ensembl gene IDs: ENSG00000206557

Ensembl transcript IDs: ENST00000383763.6

Found 413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATaGCCCACGCAGGGGAAGAGGGAAATGCAAACTCCACTGAGGAGG +
Preference number: 1 (lower is better)
Translates to: SSALPAIQMPGLCIS*PTQGKREMQTPLRR
Trigger: CCTCCTCAGTGGAGTTTGCATTTCCCTCTTCCCCTGCGTGGGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 90 bp CCACACACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTaGATATCATGCCCCACGCAGGGGAAGAGGGAAATGCAAACTCCA +
Preference number: 1 (lower is better)
Translates to: PHTSSALPAIQMPGL*ISCPTQGKREMQTP
Trigger: TGGAGTTTGCATTTCCCTCTTCCCCTGCGTGGGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 90 bp CCTAGCACTACAGAACAACATGCACTCGCGGGTCAGGGCAGACCCTaGCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTT +
Preference number: 1 (lower is better)
Translates to: PSTTEQHALAGQGRP*PFCGVPIVWGCLVL
Trigger: AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACCCGCGAGTGCATGTTGTTCTGTAGTGCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 90 bp AGAACAACATGCACTCGCGGGTCAGGGCAGACCCTGCCCTTTCTGTaGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTTAATGTGCTCC +
Preference number: 1 (lower is better)
Translates to: RTTCTRGSGQTLPFL*SSYSLGVPCSLMCS
Trigger: GGAGCACATTAAAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACCCGCGAGTGCATGTTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 90 bp TTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTTAATGTaGTCCCTGACTCCCTCAGCACACGCATGTCCACCCACATTCATG +
Preference number: 1 (lower is better)
Translates to: FLWSSYSLGVPCSLM*SLTPSAHACPPTFM
Trigger: CATGAATGTGGGTGGACATGCGTGTGCTGAGGGAGTCAGGGAGCACATTAAAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 90 bp GAGGGCTCCTCCAGAATTTGGTTCTTATTTCAGTATTTGGGGCATTaGAGGAACCCACTGGGTTCTGACAAGCAGGGTATCAGCTACATC +
Preference number: 1 (lower is better)
Translates to: EGSSRIWFLFQYLGH*RNPLGSDKQGISYI
Trigger: GATGTAGCTGATACCCTGCTTGTCAGAACCCAGTGGGTTCCTGCAATGCCCCAAATACTGAAATAAGAACCAAATTCTGGAGGAGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 90 bp TGTTTGAGAGTCCCTCTTTTCCCTGAGGAGGGCTCCTCCAGAATTTaGTTCTTATTTCAGTATTTGGGGCATTGCAGGAACCCACTGGGT +
Preference number: 1 (lower is better)
Translates to: CLRVPLFPEEGSSRI*FLFQYLGHCRNPLG
Trigger: ACCCAGTGGGTTCCTGCAATGCCCCAAATACTGAAATAAGAACCAAATTCTGGAGGAGCCCTCCTCAGGGAAAAGAGGGACTCTCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 90 bp GAGAGGTTCTTTGGGAGGCAGTGTGTCATTTTCAGCTTTACTACTTaGGTGCAAGATGGCTTTGAAACAAACATGCACACACCCTCCCTT +
Preference number: 1 (lower is better)
Translates to: ERFFGRQCVIFSFTT*VQDGFETNMHTPSL
Trigger: AAGGGAGGGTGTGTGCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCCTCCCAAAGAACCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 90 bp CATCATACAATAAACACTCTCCAAAGTGCTTCGCACCAATCCCTATaGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCAATGTTTTA +
Preference number: 1 (lower is better)
Translates to: HHTINTLQSASHQSL*VRSQPRAGKTANVL
Trigger: TAAAACATTGGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGCACTTTGGAGAGTGTTTATTGTATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR TCA 90 bp AACACCTTCCCACCCTGTAACAGCAGCTGGGAGCCAGCAGCAGTTTaGAGCTACTTTCCAACTTTTGAATCTTTTATTGCATGCAGTTCT +
Preference number: 1 (lower is better)
Translates to: NTFPPCNSSWEPAAV*SYFPTFESFIACSS
Trigger: AGAACTGCATGCAATAAAAGATTCAAAAGTTGGAAAGTAGCTTCAAACTGCTGCTGGCTCCCAGCTGCTGTTACAGGGTGGGAAGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 90 bp AGCAGGGTATCAGCTACATCTGCTTTGCACTTGAAAGACAGACAATaGCCAGAAGCACAAGTTTTGTACCCAAGTCCAGCTTACAACCAA +
Preference number: 1 (lower is better)
Translates to: SRVSATSALHLKDRQ*PEAQVLYPSPAYNQ
Trigger: TTGGTTGTAAGCTGGACTTGGGTACAAAACTTGTGCTTCTGGGCATTGTCTGTCTTTCAAGTGCAAAGCAGATGTAGCTGATACCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 90 bp GAATTTGGTTCTTATTTCAGTATTTGGGGCATTGCAGGAACCCACTaGGTTCTGACAAGCAGGGTATCAGCTACATCTGCTTTGCACTTG +
Preference number: 1 (lower is better)
Translates to: EFGSYFSIWGIAGTH*VLTSRVSATSALHL
Trigger: CAAGTGCAAAGCAGATGTAGCTGATACCCTGCTTGTCAGAACCCAGTGGGTTCCTGCAATGCCCCAAATACTGAAATAAGAACCAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 90 bp GGTTCTTTGGGAGGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTaGAAGATGGCTTTGAAACAAACATGCACACACCCTCCCTTAAAA +
Preference number: 1 (lower is better)
Translates to: GSLGGSVSFSALLLG*KMALKQTCTHPPLK
Trigger: TTTTAAGGGAGGGTGTGTGCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCCTCCCAAAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 90 bp CGAGTTACAGGTTTAAGAAAAGACATTACATCCTACATTTCAGGTTaGGACAATTTGGTTTCTAGATCCTTTATGGTCAAAGGCCTTGGG +
Preference number: 1 (lower is better)
Translates to: RVTGLRKDITSYISG*DNLVSRSFMVKGLG
Trigger: CCCAAGGCCTTTGACCATAAAGGATCTAGAAACCAAATTGTCCCAACCTGAAATGTAGGATGTAATGTCTTTTCTTAAACCTGTAACTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 90 bp GTAGTATCTCTGACCTACACACCTATTTCAGGGGATAGTTCTAGTTaGTCTAAGCCTGCAAATTTACAAGTCTGTAAATTAAGACCTGAT +
Preference number: 1 (lower is better)
Translates to: VVSLTYTPISGDSSS*SKPANLQVCKLRPD
Trigger: ATCAGGTCTTAATTTACAGACTTGTAAATTTGCAGGCTTAGAGCAACTAGAACTATCCCCTGAAATAGGTGTGTAGGTCAGAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CAA 90 bp CCACCACACACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTaGTGCATATCATGCCCCACGCAGGGGAAGAGGGAAATGCAAACT +
Preference number: 2 (lower is better)
Translates to: PPHTSSALPAIQMPG*CISCPTQGKREMQT
Trigger: AGTTTGCATTTCCCTCTTCCCCTGCGTGGGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTGTGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CAA 90 bp CGCGGGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTaGGGGGTGCCTTGTTCTTTAATGTGCTCCCTGACTCCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: RGSGQTLPFLWSSYS*GVPCSLMCSLTPSA
Trigger: TGCTGAGGGAGTCAGGGAGCACATTAAAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR TCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCCGGCCAAAAGGCAACTaGATAGGCATTGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTARPKGN*IGIGEG
Trigger: TCCTTCCCCAATGCCTATTCAGTTGCCTTTTGGCCG...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR GCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCACCACACACATCCAGTaGCCTCCCAGCCATACAGAT +
Preference number: 2 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTATTHIQ*PPSHTD
Trigger: ATCTGTATGGCTGGGAGGGCACTGGATGTGTGTGGT...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR GCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTGGCTTGTGCATATCATaGCCCACGCAGGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLGLCIS*PTQGKR
Trigger: CCTCTTCCCCTGCGTGGGGCATGATATGCACAAGCC...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR GCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCCCTTGTTCTTTAATGTaGTCCCTGACTCCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAPCSLM*SLTPSA
Trigger: TGCTGAGGGAGTCAGGGAGCACATTAAAGAACAAGG...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR CCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCAAAGGAGAGGTTCTTTaGGAGGCAGTGTGTCATTTT +
Preference number: 2 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAKGEVL*EAVCHF
Trigger: AAAATGACACACTGCCTCCCAAAGAACCTCTCCTTT...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR TCA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCAAATGCAAACTCCACTaGGGAGGGGAAGAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCKCKLH*GGEEGL
Trigger: CAGGCCCTCTTCCCCTCCTCAGTGGAGTTTGCATTT...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGGGGGATAGTTCTAGTTaGTCTAAGCCTGCAAATTTA +
Preference number: 2 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGGDSSS*SKPANL
Trigger: TAAATTTGCAGGCTTAGAGCAACTAGAACTATCCCC...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR CCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGTCCTACATTTCAGGTTaGGACAATTTGGTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGSYISG*DNLVSR
Trigger: TCTAGAAACCAAATTGTCCCAACCTGAAATGTAGGA...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CAA 90 bp GGAACCCACTGGGTTCTGACAAGCAGGGTATCAGCTACATCTGCTTaGCACTTGAAAGACAGACAATGCCCAGAAGCACAAGTTTTGTAC +
Preference number: 2 (lower is better)
Translates to: GTHWVLTSRVSATSA*HLKDRQCPEAQVLY
Trigger: GTACAAAACTTGTGCTTCTGGGCATTGTCTGTCTTTCAAGTGCAAAGCAGATGTAGCTGATACCCTGCTTGTCAGAACCCAGTGGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR CCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCTCGCACCAATCCCTATaGGTCAGGAGTCAACCACGG +
Preference number: 2 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTSHQSL*VRSQPR
Trigger: CCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGA...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CAA 90 bp CACTGGGTTCTGACAAGCAGGGTATCAGCTACATCTGCTTTGCACTaGAAAGACAGACAATGCCCAGAAGCACAAGTTTTGTACCCAAGT +
Preference number: 2 (lower is better)
Translates to: HWVLTSRVSATSALH*KDRQCPEAQVLYPS
Trigger: ACTTGGGTACAAAACTTGTGCTTCTGGGCATTGTCTGTCTTTCAAGTGCAAAGCAGATGTAGCTGATACCCTGCTTGTCAGAACCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR TCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCCATCTGCTTTGCACTTaGAAGACAGACAATGCCCAG +
Preference number: 2 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTHLLCT*KTDNAQ
Trigger: CTGGGCATTGTCTGTCTTTCAAGTGCAAAGCAGATG...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR TCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCTCCCTTGTAAGTCACTaGCGTTTGTTTGAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTSLVSH*RLFESP
Trigger: GGGACTCTCAAACAAACGTCAGTGACTTACAAGGGA...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR GCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAATCCCAGCCATACAGATaGCAGGCTTGTGCATATCAT +
Preference number: 2 (lower is better)
Translates to: GSVSFSALLLGCKMALKQSQPYR*QACAYH
Trigger: ATGATATGCACAAGCCTGGCATCTGTATGGCTGGGA...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR CCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCCAGAGGGTGTGGGACTaGGCTGTTGGTATTAATTTG +
Preference number: 2 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTQRVWD*AVGINL
Trigger: CAAATTAATACCAACAGCCCAGTCCCACACCCTCTG...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR GCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATACAGTATTTGGGGCATTaGAGGAACCCACTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEIQYLGH*RNPLGS
Trigger: AGAACCCAGTGGGTTCCTGCAATGCCCCAAATACTG...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR TCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATACAATCCTATAAAAAGTaGCCCAAGCAGAGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIQSYKK*PKQRVW
Trigger: CCACACCCTCTGCTTGGGTCACTTTTTATAGGATTG...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR TCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATAACGGGAAAAGCAACTTaGTTGACTTGTCACACTGTC +
Preference number: 2 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEITGKAT*LTCHTV
Trigger: GACAGTGTGACAAGTCAATCAAGTTGCTTTTCCCGT...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR GCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCCACAGGCTCAATCCCTaGAGAAAAGATAAGTACATT +
Preference number: 2 (lower is better)
Translates to: VSFSALLLGCKMALKQTCHRLNP*RKDKYI
Trigger: AATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTG...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR GCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATAGGTATCAGCTACATCTaGTTTGCACTTGAAAGACAG +
Preference number: 2 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEIGISYI*FALERQ
Trigger: CTGTCTTTCAAGTGCAAAGCAGATGTAGCTGATACC...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR GCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAGCTTTACTACTTGGGTaGAAGATGGCTTTGAAACAA +
Preference number: 2 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIALLLG*KMALKQ
Trigger: TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGC...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 72 bp TCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTaGATATCATGCCCCACGCAGGGGAAGAGGGAAATG +
Preference number: 3 (lower is better)
Translates to: SSALPAIQMPGL*ISCPTQGKREM
Trigger: CATTTCCCTCTTCCCCTGCGTGGGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 72 bp ACAGAACAACATGCACTCGCGGGTCAGGGCAGACCCTaGCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGC +
Preference number: 3 (lower is better)
Translates to: TEQHALAGQGRP*PFCGVPIVWGC
Trigger: GCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACCCGCGAGTGCATGTTGTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 72 bp CTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATaGCCCACGCAGGGGAAGAGGGAAATGCAAACTCCA +
Preference number: 3 (lower is better)
Translates to: LPAIQMPGLCIS*PTQGKREMQTP
Trigger: TGGAGTTTGCATTTCCCTCTTCCCCTGCGTGGGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 72 bp TGCACTCGCGGGTCAGGGCAGACCCTGCCCTTTCTGTaGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTTA +
Preference number: 3 (lower is better)
Translates to: CTRGSGQTLPFL*SSYSLGVPCSL
Trigger: TAAAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACCCGCGAGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR CAA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGCCAGAAGCACAAGTTTaGTACCCAAGTCCAGCTTAC +
Preference number: 3 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGPEAQV*YPSPAY
Trigger: GTAAGCTGGACTTGGGTACAAAACTTGTGCTTCTGG...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 72 bp AGTTCCTATAGTTTGGGGGTGCCTTGTTCTTTAATGTaGTCCCTGACTCCCTCAGCACACGCATGTCCACCC +
Preference number: 3 (lower is better)
Translates to: SSYSLGVPCSLM*SLTPSAHACPP
Trigger: GGGTGGACATGCGTGTGCTGAGGGAGTCAGGGAGCACATTAAAGAACAAGGCACCCCCAAACTATAGGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 72 bp ATAAACACTCTCCAAAGTGCTTCGCACCAATCCCTATaGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCC +
Preference number: 3 (lower is better)
Translates to: INTLQSASHQSL*VRSQPRAGKTA
Trigger: GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGCACTTTGGAGAGTGTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR CAA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCATACAGATGCCAGGCTaGTGCATATCATGCCCCACG +
Preference number: 3 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCIQMPG*CISCPT
Trigger: CGTGGGGCATGATATGCACAAGCCTGGCATCTGTAT...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 72 bp ACCCAACCCTTGCCACCTGACCAGATCAGACCTCCATaGGGACTAGTAATTGTCATACTTACTCCCCAGAAA +
Preference number: 3 (lower is better)
Translates to: TQPLPPDQIRPP*GLVIVILTPQK
Trigger: TTTCTGGGGAGTAAGTATGACAATTACTAGTCCCCATGGAGGTCTGATCTGGTCAGGTGGCAAGGGTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR TCA 72 bp TATATCCAAACCCAATGGGCATCTCCACACATAAACTaGGCTTACATCATACCCCACCCAACCCTTGCCACC +
Preference number: 3 (lower is better)
Translates to: YIQTQWASPHIN*AYIIPHPTLAT
Trigger: GGTGGCAAGGGTTGGGTGGGGTATGATGTAAGCTCAGTTTATGTGTGGAGATGCCCATTGGGTTTGGATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 72 bp TCTTATTTCAGTATTTGGGGCATTGCAGGAACCCACTaGGTTCTGACAAGCAGGGTATCAGCTACATCTGCT +
Preference number: 3 (lower is better)
Translates to: SYFSIWGIAGTH*VLTSRVSATSA
Trigger: AGCAGATGTAGCTGATACCCTGCTTGTCAGAACCCAGTGGGTTCCTGCAATGCCCCAAATACTGAAATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR TCA 72 bp CCACCCTGTAACAGCAGCTGGGAGCCAGCAGCAGTTTaGAGCTACTTTCCAACTTTTGAATCTTTTATTGCA +
Preference number: 3 (lower is better)
Translates to: PPCNSSWEPAAV*SYFPTFESFIA
Trigger: TGCAATAAAAGATTCAAAAGTTGGAAAGTAGCTTCAAACTGCTGCTGGCTCCCAGCTGCTGTTACAGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 72 bp GGAGGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTaGAAGATGGCTTTGAAACAAACATGCACACACCCT +
Preference number: 3 (lower is better)
Translates to: GGSVSFSALLLG*KMALKQTCTHP
Trigger: AGGGTGTGTGCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 72 bp TCAGCTACATCTGCTTTGCACTTGAAAGACAGACAATaGCCAGAAGCACAAGTTTTGTACCCAAGTCCAGCT +
Preference number: 3 (lower is better)
Translates to: SATSALHLKDRQ*PEAQVLYPSPA
Trigger: AGCTGGACTTGGGTACAAAACTTGTGCTTCTGGGCATTGTCTGTCTTTCAAGTGCAAAGCAGATGTAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 72 bp TCCAGAATTTGGTTCTTATTTCAGTATTTGGGGCATTaGAGGAACCCACTGGGTTCTGACAAGCAGGGTATC +
Preference number: 3 (lower is better)
Translates to: SRIWFLFQYLGH*RNPLGSDKQGI
Trigger: GATACCCTGCTTGTCAGAACCCAGTGGGTTCCTGCAATGCCCCAAATACTGAAATAAGAACCAAATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 72 bp GAACATTTCACATCATACAATAAACACTCTCCAAAGTaGTTCGCACCAATCCCTATGGGTCAGGAGTCAACC +
Preference number: 3 (lower is better)
Translates to: EHFTSYNKHSPK*FAPIPMGQEST
Trigger: GGTTGACTCCTGACCCATAGGGATTGGTGCGAAGCACTTTGGAGAGTGTTTATTGTATGATGTGAAATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR CAA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAGTCACTGACGTTTGTTaGAGAGTCCCTCTTTTCCCT +
Preference number: 3 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIVTDVC*RVPLFP
Trigger: AGGGAAAAGAGGGACTCTCAAACAAACGTCAGTGAC...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR CAA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATAACATCTGCTTTGCACTaGAAAGACAGACAATGCCCA +
Preference number: 3 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEITSALH*KDRQCP
Trigger: TGGGCATTGTCTGTCTTTCAAGTGCAAAGCAGATGT...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR CAA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATACATGGAGCGAAAATCTaGGCTTTTCGATCACATCCA +
Preference number: 3 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIHGAKI*AFRSHP
Trigger: TGGATGTGATCGAAAAGCCAAGATTTTCGCTCCATG...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR GCA 72 bp CTGACCTACACACCTATTTCAGGGGATAGTTCTAGTTaGTCTAAGCCTGCAAATTTACAAGTCTGTAAATTA +
Preference number: 3 (lower is better)
Translates to: LTYTPISGDSSS*SKPANLQVCKL
Trigger: TAATTTACAGACTTGTAAATTTGCAGGCTTAGAGCAACTAGAACTATCCCCTGAAATAGGTGTGTAGGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR-3UTR CAA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAACAGAGGAACAGAAGTaGATCCATAAGTCTTTAAAC +
Preference number: 3 (lower is better)
Translates to: TSQYSNLYIQTQWASPHITEEQK*IHKSLN
Trigger: GTTTAAAGACTTATGGATCAACTTCTGTTCCTCTGT...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CCA 72 bp GGTTTAAGAAAAGACATTACATCCTACATTTCAGGTTaGGACAATTTGGTTTCTAGATCCTTTATGGTCAAA +
Preference number: 3 (lower is better)
Translates to: GLRKDITSYISG*DNLVSRSFMVK
Trigger: TTTGACCATAAAGGATCTAGAAACCAAATTGTCCCAACCTGAAATGTAGGATGTAATGTCTTTTCTTAAACC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGCGTGGTGCCGGTGGTTaGTGTGGCCGCCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGRGAGG*CGRPLP
Trigger: CGGGAGCGGGCGGCCACAGCAACCACCGGCACCACG...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp CACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATGCCCTGCCGGTGGTTGCTGTaGCCGCCCGCTCCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: HIQCPPSHTDARLVHIMPCRWLL*PPAPAG
Trigger: TCCGGCGGGAGCGGGCGGCCACAGCAACCACCGGCA...GGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTCACCACGATCCTGCGTaGGGCGTCACAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLHHDPA*GVTGHA
Trigger: GGCGTGGCCTGTGACGCCTCACGCAGGATCGTGGTG...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCCCTCATCGCACGAGCTaGAGCCGTGAGGACGGCGGA +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAPHRTS*SREDGG
Trigger: TCCGCCGTCCTCACGGCTGCAGCTCGTGCGATGAGG...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTAGGCGCACGCGCTGGTaGGCTCGGACGCAGTTGTCG +
Preference number: 4 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLRRTRW*ARTQLS
Trigger: CGACAACTGCGTCCGAGCGCACCAGCGCGTGCGCCT...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGGTGAGGCGCACGCGCTaGTGCGCTCGGACGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGVRRTR*CARTQL
Trigger: CAACTGCGTCCGAGCGCACCAGCGCGTGCGCCTCAC...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCTCGTCGTCGTGGTGCTaGCAGAAGCCGAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTASSSWC*QKPRRS
Trigger: CGAGCGCCTCGGCTTCTGCCAGCACCACGACGACGA...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCGATGGTGAGTGCCCGTaGGTCCTGCAGTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTADGECP*VLQCLL
Trigger: CAGGAGGCACTGCAGGACTCACGGGCACTCACCATC...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGACTCGGTCGTCTTCCTaGGGCTGCAGGAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGTRSSS*GCRRLR
Trigger: GCGGAGCCTCCTGCAGCCCCAGGAAGACGACCGAGT...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCGAGGCCACCTTACCCTaGAGGGCACGCTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAEATLP*RARLRP
Trigger: TGGCCTCAAGCGTGCCCTCCAGGGTAAGGTGGCCTC...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGTATGGTCAAAGGCCTTaGGGGGAGAGGGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGYGQRP*GERGRG
Trigger: CCCCCGCCCCCTCTCCCCCCAAGGCCTTTGACCATA...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTGGGCGGCAGAAGGCGTaGAGGCAGGGCAGGACGTGT +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLGRQKA*RQGRTC
Trigger: ACACGTCCTGCCCTGCCTGCACGCCTTCTGCCGCCC...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGCAGGAACTGCCCATTaGCTGTGCCCTCCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLAGTAH*LCPPSP
Trigger: TGGGCTCGGAGGGCACAGGCAATGGGCAGTTCCTGC...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCGCTAGCACTACTTTCTaGTCGCACACGGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAASTTF*SHTGQR
Trigger: GCGCTGCCCCGTGTGCGACCAGAAAGTAGTGCTAGC...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp CACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATGCCCTCGCACAGGTGCTCCTaGCAGTCGAGGCAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: HIQCPPSHTDARLVHIMPSHRCS*QSRQRE
Trigger: TTCGCGCTGCCTCGACTGCCAGGAGCACCTGTGCGA...GGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTTGTTCCGCCACCGTCTaGGCCTGCTCGATGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLCSATV*ACSMLS
Trigger: GCTGAGCATCGAGCAGGCCCAGACGGTGGCGGAACA...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp CACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATGCCCTTCAGCTCCTGCACCTaGGCCAGCATCCGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: HIQCPPSHTDARLVHIMPFSSCT*ASIRSR
Trigger: CCGAGACCGGATGCTGGCCCAGGTGCAGGAGCTGAA...GGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTACAGGCCACGCCGGCTaGTCGGTCGAACTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLTGHAG*SVELPR
Trigger: CCTGGGCAGTTCGACCGACCAGCCGGCGTGGCCTGT...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTTGTAGTGGTCCTTGGTaGGGCGCACGCGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLCSGPW*GARAGA
Trigger: CGCACCAGCGCGTGCGCCTCACCAAGGACCACTACA...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGAAGCTGTGGCCCCCATaGCGGCCCATTGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGKLWPP*RPIVHS
Trigger: TGAGTGCACAATGGGCCGGCATGGGGGCCACAGCTT...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGGATGCTCAGCTGGATTaGCTGTCGTCCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGDAQLD*LSSLLG
Trigger: GCCCAGCAGGGACGACAGGCAATCCAGCTGAGCATC...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCGTCACAGATACCAGGTaGTCACCCTCCAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAVTDTR*SPSSWG
Trigger: ACCCCAGCTGGAGGGTGAGCACCTGGTATCTGTGAC...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCTCAGGCCCAAACAGCTaGATCCGGTGGTTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTASGPNS*IRWFLV
Trigger: CACGAGGAACCACCGGATCCAGCTGTTTGGGCCTGA...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGCCAAAGCCGCTGCCTTaGGCACCAAACTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGPKPLP*APNLHR
Trigger: CCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTGG...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGCCAACCCTTGCCACCTaGCCAGATCAGACCTCCATG +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGPTLAT*PDQTSM
Trigger: CATGGAGGTCTGATCTGGTCAGGTGGCAAGGGTTGG...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp CACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATGCCCGTGTCACAGTACAGGTaGAGCACCTCGTCGTCGTGG +
Preference number: 4 (lower is better)
Translates to: HIQCPPSHTDARLVHIMPVSQYR*STSSSW
Trigger: CCACGACGACGAGGTGCTGCACCTGTACTGTGACAC...GGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGCTGCACCAAACAGGTTaGCATCAGGGCCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGLHQTG*HQGPGP
Trigger: TGGTCCTGGGCCCTGATGGCAACCTGTTTGGTGCAG...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGGGCTTGTGCATATCATaGCCCACGCAGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGGLCIS*PTQGKR
Trigger: CCTCTTCCCCTGCGTGGGGCATGATATGCACAAGCC...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCCACTACAGAACAACATaGACTCGCGGGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAHYRTT*TRGSGQ
Trigger: CTGCCCTGACCCGCGAGTGCATGTTGTTCTGTAGTG...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGCAGGGCTTGAACACCTaGATGCGGTTGTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGQGLNT*MRLLLR
Trigger: CCGCAGCAACAACCGCATCCAGGTGTTCAAGCCCTG...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCATGATGCGCCCTTCCTaGTCCACAGCTACCCCTTGT +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAMMRPS*STATPC
Trigger: ACAAGGGGTAGCTGTGGACCAGGAAGGGCGCATCAT...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CAA 72 bp ACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTaGTGCATATCATGCCCCACGCAGGGGAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TSSALPAIQMPG*CISCPTQGKRE
Trigger: TTCCCTCTTCCCCTGCGTGGGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCGAACCCACTGGGTTCTaGCAAGCAGGGTATCAGCTA +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAEPTGF*QAGYQL
Trigger: TAGCTGATACCCTGCTTGTCAGAACCCAGTGGGTTC...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGCGCAGCTTCTCCACCTaGAGGTACAGAGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGRSFST*RYRDLA
Trigger: AGCCAAGTCTCTGTACCTGCAGGTGGAGAAGCTGCG...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTTCCTCCAGGACCTGCTaGACGGCACTGATGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLSSRTC*TALMVL
Trigger: GAGCACCATCAGTGCCGTGCAGCAGGTCCTGGAGGA...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCCGCGGGTGCGCGTGGTaGGCGTGGTGCCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTRGCAW*AWCRWL
Trigger: CAACCACCGGCACCACGCTCACCACGCGCACCCGCG...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCCATCCCAAGGGTAGTTaGACTGCCCATTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAHPKGS*TAHSWF
Trigger: GAACCAAGAATGGGCAGTTCAACTACCCTTGGGATG...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCTCATTCCGTCGGGGGTaGTGGCGATGCCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCSFRRG*WRCRKG
Trigger: GCCCTTCCGGCATCGCCATCACCCCCGACGGAATGA...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGCTTGAGCACCAAACTTaGACAGGAAGCTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGLEHQT*TGSCRW
Trigger: CCAACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAG...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCCACGAGCTGCAGCCGTaGGGACGGCGGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTHELQP*GRRSSS
Trigger: GCTGCTGCTCCGCCGTCCTCACGGCTGCAGCTCGTG...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCGGTGCAAGATGGCTTTaGAACAAACATGCACACACC +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAGARWL*NKHAHT
Trigger: GGTGTGTGCATGTTTGTTTCAAAGCCATCTTGCACC...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCGCTGGTCGGTCGAACTaGCCAGGCCGGGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTAGRSN*PGREPR
Trigger: CCTGGGCTCCCGGCCTGGGCAGTTCGACCGACCAGC...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGCAGTATTTGGGGCATTaGAGGAACCCACTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGQYLGH*RNPLGS
Trigger: AGAACCCAGTGGGTTCCTGCAATGCCCCAAATACTG...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGGAATGCTGCGTCCTGTaGCCTTGGCCCTATAGAAAA +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGECCVL*PWPYRK
Trigger: TTTTCTATAGGGCCAAGGGCACAGGACGCAGCATTC...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACGACGCGGACGAGTTaGAGGAGAGCGGCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQTTRTS*RRAAPA
Trigger: CGCCGGCGCCGCTCTCCTCCAACTCGTCCGCGTCGT...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTAACAGCTGGATCCGGTaGTTCCTCGTGTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLNSWIR*FLVSET
Trigger: GGTCTCAGACACGAGGAACCACCGGATCCAGCTGTT...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTCCCAAGCAGAGGGTGTaGGACTGGGCTGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLPKQRV*DWAVGI
Trigger: AATACCAACAGCCCAGTCCCACACCCTCTGCTTGGG...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGCAAAGCCAAAAGACTTaGTGGCAAGGTACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGQSQKT*WQGTVP
Trigger: AGGCACTGTACCTTGCCATCAAGTCTTTTGGCTTTG...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp CACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATGCCCCAATCCTATAAAAAGTaGCCCAAGCAGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: HIQCPPSHTDARLVHIMPQSYKK*PKQRVW
Trigger: CCACACCCTCTGCTTGGGTCACTTTTTATAGGATTG...GGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTTCACTGACGTTTGTTTaGGAGTCCCTCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLSLTFV*ESLFSL
Trigger: CAGGGAAAAGAGGGACTCTCAAACAAACGTCAGTGA...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp CACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATGCCCTCCCTTGTAAGTCACTaGCGTTTGTTTGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: HIQCPPSHTDARLVHIMPSLVSH*RLFESP
Trigger: GGGACTCTCAAACAAACGTCAGTGACTTACAAGGGA...GGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTAGCTTGTTGAGGTTTTaGCGCAGCTTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLSLLRF*RSFSTC
Trigger: GCAGGTGGAGAAGCTGCGGCAAAACCTCAACAAGCT...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ATTCTACCCCACAGTTCTGCAGTGGGAGCCTTAAATTTTCATTCTTTGGTACCGTCGTCTTCCTGGGGCTaGAGGAGGCTCCGCACGGTC +
Preference number: 4 (lower is better)
Translates to: ILPHSSAVGALNFHSLVPSSSWG*RRLRTV
Trigger: GACCGTGCGGAGCCTCCTGCAGCCCCAGGAAGACGA...CGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ATTCTACCCCACAGTTCTGCAGTGGGAGCCTTAAATTTTCATTCTTTGGTACCGCGAGCCCAGAAAGCGTaGCGACTGGCAGTCGGGGTG +
Preference number: 4 (lower is better)
Translates to: ILPHSSAVGALNFHSLVPRAQKA*RLAVGV
Trigger: CACCCCGACTGCCAGTCGGCACGCTTTCTGGGCTCG...CGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCTGTGACACCATCACCTaGAAGTACAAGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTACDTIT*KYKSVT
Trigger: AGTCACACTCTTGTACTTGCAGGTGATGGTGTCACA...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTACAGGAAGCTGCCGTTaGATTCAAACATCTGTACCC +
Preference number: 4 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLTGSCR*IQTSVP
Trigger: GGGTACAGATGTTTGAATCCAACGGCAGCTTCCTGT...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp CACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATGCCCAGGGCAGAAGAGAGGTaGGAGGGTCAATACAGTATA +
Preference number: 4 (lower is better)
Translates to: HIQCPPSHTDARLVHIMPRAEER*EGQYSI
Trigger: TATACTGTATTGACCCTCCCACCTCTCTTCTGCCCT...GGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CAA 72 bp GGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTaGGGGGTGCCTTGTTCTTTAATGTGCTCCCTGACT +
Preference number: 4 (lower is better)
Translates to: GQTLPFLWSSYS*GVPCSLMCSLT
Trigger: AGTCAGGGAGCACATTAAAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp ATTCTACCCCACAGTTCTGCAGTGGGAGCCTTAAATTTTCATTCTTTGGTACCGCCAGCAGCTGGATGGTaGGTGCCCGTGAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ILPHSSAVGALNFHSLVPPAAGW*VPVSPA
Trigger: TGCAGGACTCACGGGCACTCACCATCCAGCTGCTGG...CGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATACGCCTGTGGCCTTGGTaGGTGGGGCAAAGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIRLWPW*VGQRPR
Trigger: GCGGGGCCTTTGCCCCACTCACCAAGGCCACAGGCG...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCCATCAGGTCGCCTCCTaGGAGGCGGGGCTCACCATC +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTHQVAS*EAGLTI
Trigger: GATGGTGAGCCCCGCCTCTCAGGAGGCGACCTGATG...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCAGTGGCCCTCATGGTTaGAGGCCACACCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTSGPHG*RPHPVG
Trigger: CCCCACGGGGTGTGGCCTTCAACCATGAGGGCCACT...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGAAAAGCAACTTGATTaGCTTGTCACACTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLEKQLD*LVTLSP
Trigger: TGGGGACAGTGTGACAAGTCAATCAAGTTGCTTTTC...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp CACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATGCCCTCTCCACACATAAACTaGGCTTACATCATACCCCAC +
Preference number: 4 (lower is better)
Translates to: HIQCPPSHTDARLVHIMPSPHIN*AYIIPH
Trigger: GTGGGGTATGATGTAAGCTCAGTTTATGTGTGGAGA...GGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAACGCTGTCACCCTCACTaGCGAAGCTCAGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQRCHPH*RSSGPG
Trigger: TCCCGGGCCTGAGCTTCGGCAGTGAGGGTGACAGCG...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAGCGGCTCGTCGGCAGTaGCCACCACCGCGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIAARRQ*PPPRRA
Trigger: TGCTCGACGCGGTGGTGGCCACTGCCGACGAGCCGC...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTTGCACTCACGACAGATaGGTACAGAGCAAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLCTHDR*VQSKCH
Trigger: GTGACACTTGCTCTGTACCCATCTGTCGTGAGTGCA...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCAGTCATGCACCATTTTaGGTACAGAAAGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTASHAPF*VQKGKE
Trigger: CTCCTTACCTTTCTGTACCCAAAATGGTGCATGACT...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCCAGATCAGACCTCCATaGGGACTAGTAATTGTCATA +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAQIRPP*GLVIVI
Trigger: TATGACAATTACTAGTCCCCATGGAGGTCTGATCTG...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTACAGGGCACATGTTCTaGGACAGCATTAGATCTTGG +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLTGHMF*DSIRSW
Trigger: CCAAGATCTAATGCTGTCTCAGAACATGTGCCCTGT...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ATTCTACCCCACAGTTCTGCAGTGGGAGCCTTAAATTTTCATTCTTTGGTACCGGCGAAGAAGCTGCGTTaGCCTCATCGCACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ILPHSSAVGALNFHSLVPAKKLR*PHRTSC
Trigger: GCAGCTCGTGCGATGAGGGCAACGCAGCTTCTTCGC...CGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAAGGCCCGGGAGCCCAATaGCCACGTAGCTGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKGPGAQ*PRSCGL
Trigger: CAGGCCGCAGCTACGTGGGCATTGGGCTCCCGGGCC...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCTCTGCCCAAAGCCGCTaGCTTGAGCACCAAACTTGC +
Preference number: 4 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCSAQSR*LEHQTC
Trigger: GCAAGTTTGGTGCTCAAGGCAGCGGCTTTGGGCAGA...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCGGGGATAGTTCTAGTTaGTCTAAGCCTGCAAATTTA +
Preference number: 4 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAGDSSS*SKPANL
Trigger: TAAATTTGCAGGCTTAGAGCAACTAGAACTATCCCC...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCCACCCCGGACAGGCTTaGAGTGTGGTTTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTHPGQA*SVVSAA
Trigger: GGCCGCAGAAACCACACTGCAAGCCTGTCCGGGGTG...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCTGTGGCCTTGGTGAGTaGGGCAAAGGCCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTCGLGE*GKGPAA
Trigger: AGCAGCGGGGCCTTTGCCCCACTCACCAAGGCCACA...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTCAGAGGGTGTGGGACTaGGCTGTTGGTATTAATTTG +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLQRVWD*AVGINL
Trigger: CAAATTAATACCAACAGCCCAGTCCCACACCCTCTG...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAACCTGGAGGGCACGCTTaGGGCCATCGCCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKPGGHA*GHRLWP
Trigger: AGGCCACAGGCGATGGCCTCAAGCGTGCCCTCCAGG...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCAGCCGCACATCTCCTTaGACAGCAAGCAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCSRTSP*TASRSG
Trigger: TCCAGATCTGCTTGCTGTGCAAGGAGATGTGCGGCT...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAACCTCGTCGTCGTGGTaGTGGCAGAAGCCGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHITSSSW*WQKPRR
Trigger: GCGCCTCGGCTTCTGCCAGCACCACGACGACGAGGT...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCATTGCCTGTCGTCCCTaGTGGGCATCTGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTIACRP*WASASS
Trigger: GCTGCTGGCAGATGCCCAGCAGGGACGACAGGCAAT...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTTCTCAATGTGCTGGTTaGACAGTGTCACAGATACCA +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLSQCAG*TVSQIP
Trigger: TGGTATCTGTGACACTGTGCAACCAGCACATTGAGA...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCACTGCCCATTGCCTGTaGCCTCCGAGCCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTTAHCL*PPSPES
Trigger: GCTTTCTGGGCTCGGAGGGCACAGGCAATGGGCAGT...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGGCTTTACTACTTGGGTaGAAGATGGCTTTGAAACAA +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGALLLG*KMALKQ
Trigger: TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGC...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGAAAGCATGGCCTGGGTaGAAACAATCCTATAAAAAG +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGKAWPG*KQSYKK
Trigger: CTTTTTATAGGATTGTTTGCACCCAGGCCATGCTTT...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCCACAGCAAGCAGATCTaGAAATCGGTCTCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCHSKQI*KSVSGN
Trigger: GTTCCCCGAGACCGATTTCCAGATCTGCTTGCTGTG...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTCTGTTCTCAATGTGCTaGTTGCACAGTGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLLFSMC*LHSVTD
Trigger: ATCTGTGACACTGTGCAACCAGCACATTGAGAACAG...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCAGGGTGCCGAATTTGTaGTGGAAGGCGCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCRVPNL*WKAPQG
Trigger: GCCCTGCGGCGCCTTCCACCACAAATTCGGCACCCT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGATGGAGCGAAAATCTTaGCTTTTCGATCACATCCAT +
Preference number: 4 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGMERKS*LFDHIH
Trigger: ATGGATGTGATCGAAAAGCCAAGATTTTCGCTCCAT...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp CACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATGCCCTATATCCAAACCCAATaGGCATCTCCACACATAAAC +
Preference number: 4 (lower is better)
Translates to: HIQCPPSHTDARLVHIMPYIQTQ*ASPHIN
Trigger: GTTTATGTGTGGAGATGCCCATTGGGTTTGGATATA...GGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAACCTGCTGCACGGCACTaGTGGTGCTCTCAAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQPAARH*WCSQAC
Trigger: ACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGG...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATAAGGCGCCGCAGGGCTTaGACACCTGGATGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEIRRRRA*TPGCGC
Trigger: ACAACCGCATCCAGGTGTTCAAGCCCTGCGGCGCCT...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCGTGGTTCCTCGTGTCTaGGACCAGGATCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTVVPRV*DQDLAL
Trigger: GAGGGCAAGATCCTGGTCTCAGACACGAGGAACCAC...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATACCCTCCTCCAGGACCTaGTGCACGGCACTGATGGTG +
Preference number: 4 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEIPSSRT*CTALMV
Trigger: CACCATCAGTGCCGTGCAGCAGGTCCTGGAGGAGGG...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATAGCCGGGAGCCCAGGGTaGCGAATTTGTGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEIAGSPG*RICGGR
Trigger: CCTTCCACCACAAATTCGGCACCCTGGGCTCCCGGC...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATACAGCCACCACGATCCTaGGTGAGGCGTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIQPPRS*VRRHRP
Trigger: TGGCCTGTGACGCCTCACGCAGGATCGTGGTGGCTG...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ATTCTACCCCACAGTTCTGCAGTGGGAGCCTTAAATTTTCATTCTTTGGTACCGGTCCACGTCAGCCCATaGCTGAAAACCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ILPHSSAVGALNFHSLVPVHVSP*LKTLSL
Trigger: CAGAGAGAGGGTTTTCAGGCATGGGCTGACGTGGAC...CGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAAGCACCTCGTCGTCGTaGTGCTGGCAGAAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHISTSSS*CWQKPR
Trigger: CCTCGGCTTCTGCCAGCACCACGACGACGAGGTGCT...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCGCATCTGCCAGCAGCTaGATGGTGAGTGCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCASASS*MVSARE
Trigger: CTCACGGGCACTCACCATCCAGCTGCTGGCAGATGC...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCTGCTCGATGCTCAGCTaGATTGCCTGTCGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTCSMLS*IACRPC
Trigger: GCAGGGACGACAGGCAATCCAGCTGAGCATCGAGCA...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAGAAGGCCACACCCCGTaGGGAGTCAAAGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQEGHTP*GVKVLP
Trigger: TGGAAGCACTTTGACTCCCCACGGGGTGTGGCCTTC...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAACAACTCCTGGCTACCTaGCATTACCCGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQQLLAT*HYPGRR
Trigger: TCTCCTGCCCGGGTAATGCCAGGTAGCCAGGAGTTG...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAAGCGCTCGGGAAACACTaGGAGGATGGAGAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKALGKH*EDGEGR
Trigger: CCGCCCTTCTCCATCCTCTCAGTGTTTCCCGAGCGC...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAGGGAACGAAGCCATTTaGAACCCAGCCCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIGNEAI*NPARRR
Trigger: CCTCCTCCGGGCTGGGTTGCAAATGGCTTCGTTCCC...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATAGCAGCGCGAAGAAGCTaGGTTGCCCTCATCGCACGA +
Preference number: 4 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEIAARRS*VALIAR
Trigger: TCGTGCGATGAGGGCAACGCAGCTTCTTCGCGCTGC...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAGCCACCGTCTGGGCCTaGTCGATGCTCAGCTGGATT +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIATVWA*SMLSWI
Trigger: AATCCAGCTGAGCATCGAGCAGGCCCAGACGGTGGC...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ATTCTACCCCACAGTTCTGCAGTGGGAGCCTTAAATTTTCATTCTTTGGTACCGCTGAGACCAGGATCTTaGCCTCAGAATTCACCGCCA +
Preference number: 4 (lower is better)
Translates to: ILPHSSAVGALNFHSLVPLRPGS*PQNSPP
Trigger: TGGCGGTGAATTCTGAGGGCAAGATCCTGGTCTCAG...CGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCCGAGGATTCGATTGTTaGCAAAGTCCACCACAACGA +
Preference number: 4 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCRGFDC*QSPPQR
Trigger: TCGTTGTGGTGGACTTTGGCAACAATCGAATCCTCG...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ATTCTACCCCACAGTTCTGCAGTGGGAGCCTTAAATTTTCATTCTTTGGTACCGACCACACACATCCAGTaGCCTCCCAGCCATACAGAT +
Preference number: 4 (lower is better)
Translates to: ILPHSSAVGALNFHSLVPTTHIQ*PPSHTD
Trigger: ATCTGTATGGCTGGGAGGGCACTGGATGTGTGTGGT...CGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTCTCAAATACCAGTCATaGACCATTTTGGGTACAGAA +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLLKYQS*TILGTE
Trigger: TTCTGTACCCAAAATGGTGCATGACTGGTATTTGAG...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCACCAAGTGGCCCTCATaGTTGAAGGCCACACCCCGT +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCTKWPS*LKATPR
Trigger: ACGGGGTGTGGCCTTCAACCATGAGGGCCACTTGGT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAATCAGTGACCACCAAGTaGCCCTCATGGTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQSVTTK*PSWLKA
Trigger: GGCCTTCAACCATGAGGGCCACTTGGTGGTCACTGA...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp ATTCTACCCCACAGTTCTGCAGTGGGAGCCTTAAATTTTCATTCTTTGGTACCGTGCGTCCTGTGCCCTTaGCCCTATAGAAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: ILPHSSAVGALNFHSLVPCVLCP*PYRKPE
Trigger: CTCTGGTTTTCTATAGGGCCAAGGGCACAGGACGCA...CGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATAGACAGGCTTGCAGTGTaGTTTCTGCGGCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEIDRLAV*FLRPGE
Trigger: CTCCCCTGGCCGCAGAAACCACACTGCAAGCCTGTC...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAATCGCCGTCACGGCTTTaGCCTCCGACTGCACAACCT +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKSPSRL*PPTAQP
Trigger: AGGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGA...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCACCCATCTACTGCATTaGTGGGATTCACATTACCAC +
Preference number: 4 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCTHLLH*WDSHYH
Trigger: GTGGTAATGTGAATCCCATCAATGCAGTAGATGGGT...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAACAGTTGTCGCACAGGTaGTCCTGGCAGTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKQLSHR*SWQSRQ
Trigger: CTGCCTCGACTGCCAGGAGCACCTGTGCGACAACTG...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATATCTGGGCCTGCTCGATaGTCAGCTGGATTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEISGPAR*SAGLPV
Trigger: GACAGGCAATCCAGCTGAGCATCGAGCAGGCCCAGA...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ATTCTACCCCACAGTTCTGCAGTGGGAGCCTTAAATTTTCATTCTTTGGTACCGGGGCTGTTCTCAATGTaGTGGTTGCACAGTGTCACA +
Preference number: 4 (lower is better)
Translates to: ILPHSSAVGALNFHSLVPGLFSM*WLHSVT
Trigger: TGTGACACTGTGCAACCAGCACATTGAGAACAGCCC...CGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAGCAGGTACAGAGACTTaGCTTTCACCTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQAGTET*LSPGGS
Trigger: AGATCCGCCAGGTGAAAGCCAAGTCTCTGTACCTGC...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAAGTGCCGAATTTGTGGTaGAAGGCGCCGCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKVPNLW*KAPQGL
Trigger: CAAGCCCTGCGGCGCCTTCCACCACAAATTCGGCAC...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTACAAGCCTAAAACTTTaGCATATCTTTCACCACCTA +
Preference number: 4 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLTSLKL*HIFHHL
Trigger: TAGGTGGTGAAAGATATGCCAAAGTTTTAGGCTTGT...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CAA 72 bp TGGGTTCTGACAAGCAGGGTATCAGCTACATCTGCTTaGCACTTGAAAGACAGACAATGCCCAGAAGCACAA +
Preference number: 4 (lower is better)
Translates to: WVLTSRVSATSA*HLKDRQCPEAQ
Trigger: TTGTGCTTCTGGGCATTGTCTGTCTTTCAAGTGCAAAGCAGATGTAGCTGATACCCTGCTTGTCAGAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAACACGTAGCTGCGGCCTaGCTTGACCACCACCTTGAA +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKHVAAA*LDHHLE
Trigger: TTCAAGGTGGTGGTCAAGTCAGGCCGCAGCTACGTG...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATATGCGGTCGGCGACAATaGTGTAGCCCTCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHICGRRQ*CSPPCL
Trigger: TAGACAAGGAGGGCTACATCATTGTCGCCGACCGCA...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCACTGGCCCTCGAACGTaGAGATCTGGATGCGATGAT +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCTGPRT*RSGCDD
Trigger: ATCATCGCATCCAGATCTTCACGTTCGAGGGCCAGT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAATGGAATCCGCCACAATaGTGCGCCCTTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKWNPPQ*CALPGP
Trigger: TGGACCAGGAAGGGCGCATCATTGTGGCGGATTCCA...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAAAATGCAAACTCCACTaGGGAGGGGAAGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIKCKLH*GGEEGL
Trigger: CAGGCCCTCTTCCCCTCCTCAGTGGAGTTTGCATTT...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATACATGCCGGCCCATTGTaGACTCACGACAGATGGGTA +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIHAGPL*THDRWV
Trigger: TACCCATCTGTCGTGAGTGCACAATGGGCCGGCATG...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCGCTTTGACCTCCGACTaGACAACCTTCGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCALTSD*TTFAFI
Trigger: GATGAAGGCGAAGGTTGTGCAGTCGGAGGTCAAAGC...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATATCCAGGGCTTTCTTATaGCTCGCCGTCACGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHISRAFL*LAVTAL
Trigger: CAAAGCCGTGACGGCGAGGCATAAGAAAGCCCTGGA...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATACAGATGCCAGGCTTGTaGATATCATGCCCCACGCAG +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIQMPGL*ISCPTQ
Trigger: CTGCGTGGGGCATGATATGCACAAGCCTGGCATCTG...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCGGTATCAGCTACATCTaGTTTGCACTTGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCGISYI*FALERQ
Trigger: CTGTCTTTCAAGTGCAAAGCAGATGTAGCTGATACC...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAACACAGCTACCCCTTGTaGGCGCAGGAACTGCCCATT +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKHSYPL*AQELPI
Trigger: AATGGGCAGTTCCTGCGCCCACAAGGGGTAGCTGTG...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATATCGCACCAATCCCTATaGGTCAGGAGTCAACCACGG +
Preference number: 4 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEISHQSL*VRSQPR
Trigger: CCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGA...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
3UTR CAA 72 bp CACTTGAAAGACAGACAATGCCCAGAAGCACAAGTTTaGTACCCAAGTCCAGCTTACAACCAACCAATCCTG +
Preference number: 4 (lower is better)
Translates to: HLKDRQCPEAQV*YPSPAYNQPIL
Trigger: CAGGATTGGTTGGTTGTAAGCTGGACTTGGGTACAAAACTTGTGCTTCTGGGCATTGTCTGTCTTTCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp ATTCTACCCCACAGTTCTGCAGTGGGAGCCTTAAATTTTCATTCTTTGGTACCGGAGCCAGCAGCAGTTTaGAGCTACTTTCCAACTTTT +
Preference number: 4 (lower is better)
Translates to: ILPHSSAVGALNFHSLVPEPAAV*SYFPTF
Trigger: AAAAGTTGGAAAGTAGCTTCAAACTGCTGCTGGCTC...CGGTACCAAAGAATGAAAATTTAAGGCTCCCACTGCAGAACTGTGGGGTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCGACTTAAAAGGGCATTaGGGAGTTAGTGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTDLKGH*GVSALG
Trigger: CCCAAGTGCACTAACTCCTCAATGCCCTTTTAAGTC...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCCACAGGCTCAATCCCTaGAGAAAAGATAAGTACATT +
Preference number: 4 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCHRLNP*RKDKYI
Trigger: AATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTG...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCATAACCAGGAGCCGGTaGTTGTTGAAGTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCITRSR*LLKSVT
Trigger: GGTCACTGACTTCAACAACCACCGGCTCCTGGTTAT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCACCCTGCCCTTTCTGTaGAGTTCCTATAGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCTLPFL*SSYSLG
Trigger: CCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCATTGCAGGAACCCACTaGGTTCTGACAAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCIAGTH*VLTSRV
Trigger: TACCCTGCTTGTCAGAACCCAGTGGGTTCCTGCAAT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATATGCTCTCAAGCTTGTTaGGGTTTTGCCGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHICSQAC*GFAAAS
Trigger: AGAAGCTGCGGCAAAACCTCAACAAGCTTGAGAGCA...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAAAGATCTGGATGCGATaGTTGTCCTTGTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIKIWMR*LSLSAT
Trigger: GGTGGCTGACAAGGACAATCATCGCATCCAGATCTT...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACGGGAAAAGCAACTTaGTTGACTTGTCACACTGTC +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQTGKAT*LTCHTV
Trigger: GACAGTGTGACAAGTCAATCAAGTTGCTTTTCCCGT...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCCCTTGTTCTTTAATGTaGTCCCTGACTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCPCSLM*SLTPSA
Trigger: TGCTGAGGGAGTCAGGGAGCACATTAAAGAACAAGG...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAATTGCAGTGTGGTTTCTaGGGCCAGGGGAGTTACTAC +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKLQCGF*GQGSYY
Trigger: GTAGTAACTCCCCTGGCCGCAGAAACCACACTGCAA...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATAAACTTGAGGAGGAACTaGCCCTCGAACGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEINLRRN*PSNVKI
Trigger: GATCTTCACGTTCGAGGGCCAGTTCCTCCTCAAGTT...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCACCAATCCTGTAAAGTaGCACAGATTCTACCCCACA +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCTNPVK*HRFYPT
Trigger: TGTGGGGTAGAATCTGTGTCACTTTACAGGATTGGT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAACTGATCACTCACCTCTaGACCAAACAGGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKLITHL*TKQVAI
Trigger: GATGGCAACCTGTTTGGTGCAGAGGTGAGTGATCAG...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATATCCCAGCCATACAGATaGCAGGCTTGTGCATATCAT +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHISQPYR*QACAYH
Trigger: ATGATATGCACAAGCCTGGCATCTGTATGGCTGGGA...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAAAACATCTGTACCCGATaGTTCCTGGAATCCGCCACA +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKNICTR*FLESAT
Trigger: TGTGGCGGATTCCAGGAACCATCGGGTACAGATGTT...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAAAAGGAGAGGTTCTTTaGGAGGCAGTGTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQKGEVL*EAVCHF
Trigger: AAAATGACACACTGCCTCCCAAAGAACCTCTCCTTT...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAATCTTATTTCAGTATTTaGGGCATTGCAGGAACCCAC +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQSYFSI*GIAGTH
Trigger: GTGGGTTCCTGCAATGCCCCAAATACTGAAATAAGA...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAGCAAGTACAAGAGTGTaGCTTTTATACAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIASTRV*LLYSPR
Trigger: TCTGGGGCTGTATAAAAGTCACACTCTTGTACTTGC...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCATGACTTGCCACAAGTaGGGTAGAAACTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCMTCHK*GRNSAK
Trigger: TTTTGCTGAGTTTCTACCTCACTTGTGGCAAGTCAT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAACTTGCACAGGAAGCTaGCGTTGGATTCAAACATCT +
Preference number: 4 (lower is better)
Translates to: TSQYSNLYIQTQWASPHITCTGS*RWIQTS
Trigger: AGATGTTTGAATCCAACGGCAGCTTCCTGTGCAAGT...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAATTTCACACTAGGGACTaGCAAATGTTGGCTTTTATC +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQFHTRD*QMLAFI
Trigger: GATAAAAGCCAACATTTGGCAGTCCCTAGTGTGAAA...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAAGACTTGGCTTTCACCTaGCGGATCTTTTCTACCTTC +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKDLAFT*RIFSTF
Trigger: GAAGGTAGAAAAGATCCGCCAGGTGAAAGCCAAGTC...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAATTCAGCTTTACTACTTaGGTGCAAGATGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GSVSFSALLLGCKMALKQFSFTT*VQDGFE
Trigger: TTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAA...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAAAAACACTCTCCAAAGTaGTTCGCACCAATCCCTATG +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKKHSPK*FAPIPM
Trigger: CATAGGGATTGGTGCGAAGCACTTTGGAGAGTGTTT...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCCAGGTTGGGACAATTTaGTTTCTAGATCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCQVGTI*FLDPLW
Trigger: CCATAAAGGATCTAGAAACCAAATTGTCCCAACCTG...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCGTAGAACATTTCTCCTaGGAGAAATCAGTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTVEHFS*EKSVVD
Trigger: ATCTACAACTGATTTCTCCCAGGAGAAATGTTCTAC...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCAACCTTCTATTTCCCTaGACTTTCAAAGCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCNLLFP*TFKAGK
Trigger: TTTTCCTGCTTTGAAAGTTCAGGGAAATAGAAGGTT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR TCA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATAAAAGCTTTCCAAATGTaGCCATGTTTCTCAAATACC +
Preference number: 4 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEIKAFQM*PCFSNT
Trigger: GGTATTTGAGAAACATGGTCACATTTGGAAAGCTTT...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAATTGAAAGACAGACAATaGCCAGAAGCACAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKLKDRQ*PEAQVL
Trigger: CAAAACTTGTGCTTCTGGGCATTGTCTGTCTTTCAA...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR GCA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCACAACAGTAATGGTATaGATAATTCTTTTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VSFSALLLGCKMALKQTCTTVMV*IILFEG
Trigger: CCCCTCAAAAAGAATTATGCATACCATTACTGTTGT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CCA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAAAAAACCAGTTGTCTTTaGTGTTTAAAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: YHFTGSIPAEKISTFICKKTSCL*CLKGGL
Trigger: CAAGCCACCCTTTAAACACCAAAGACAACTGGTTTT...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp TGCGGGAGTGGCGGCGCGGAGGCGGACGCGCGCGGGTGCGCGTGGTaGGCGTGGTGCCGGTGGTTGCTGTGGCCGCCCGCTCCCGCCGGA +
Preference number: 5 (lower is better)
Translates to: CGSGGAEADARGCAW*AWCRWLLWPPAPAG
Trigger: TCCGGCGGGAGCGGGCGGCCACAGCAACCACCGGCACCACGCTCACCACGCGCACCCGCGCGCGTCCGCCTCCGCGCCGCCACTCCCGCA
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp AGGCGGACGCGCGCGGGTGCGCGTGGTGAGCGTGGTGCCGGTGGTTaGTGTGGCCGCCCGCTCCCGCCGGAGCGCCGGCGCGCCCGTTCT +
Preference number: 5 (lower is better)
Translates to: RRTRAGARGERGAGG*CGRPLPPERRRARS
Trigger: AGAACGGGCGCGCCGGCGCTCCGGCGGGAGCGGGCGGCCACAGCAACCACCGGCACCACGCTCACCACGCGCACCCGCGCGCGTCCGCCT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp AGGATGGAGAAGGGCGGGCCGGGAAAGGGCGGCCCGAGCCCGAGCTaGTGCGCCGCTGCTGCGGCACCGGGACCCGGCGGGCCGCGCTCG +
Preference number: 5 (lower is better)
Translates to: RMEKGGPGKGGPSPS*CAAAAAPGPGGPRS
Trigger: CGAGCGCGGCCCGCCGGGTCCCGGTGCCGCAGCAGCGGCGCAGCAGCTCGGGCTCGGGCCGCCCTTTCCCGGCCCGCCCTTCTCCATCCT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp TGCTGTGGCCGCCCGCTCCCGCCGGAGCGCCGGCGCGCCCGTTCTTaGGCGGCGGCTCGTCGGCAGTGGCCACCACCGCGTCGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: CCGRPLPPERRRARS*AAARRQWPPPRRAG
Trigger: ACCTGCTCGACGCGGTGGTGGCCACTGCCGACGAGCCGCCGCCCAAGAACGGGCGCGCCGGCGCTCCGGCGGGAGCGGGCGGCCACAGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp CCTCGGCTAGCACTACTTTCTGGTCGCACACGGGGCAGCGCAGCTTaGGCGGCTCTCCCGCCGCGCCGCCGCCCGCCGCCGGCAGCCGGT +
Preference number: 5 (lower is better)
Translates to: PRLALLSGRTRGSAA*AALPPRRRPPPAAG
Trigger: ACCGGCTGCCGGCGGCGGGCGGCGGCGCGGCGGGAGAGCCGCTCAAGCTGCGCTGCCCCGTGTGCGACCAGAAAGTAGTGCTAGCCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp CGGCACCGGGACCCGGCGGGCCGCGCTCGATGTAGTGGTCCTTGGTaGGGCGCACGCGCTGGTGCGCTCGGACGCAGTTGTCGCACAGGT +
Preference number: 5 (lower is better)
Translates to: RHRDPAGRARCSGPW*GARAGALGRSCRTG
Trigger: ACCTGTGCGACAACTGCGTCCGAGCGCACCAGCGCGTGCGCCTCACCAAGGACCACTACATCGAGCGCGGCCCGCCGGGTCCCGGTGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp AGTCGAGGCAGCGCGAAGAAGCTGCGTTGCCCTCATCGCACGAGCTaGAGCCGTGAGGACGGCGGAGCAGCAGCGCCGACGGGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: SRGSAKKLRCPHRTS*SREDGGAAAPTGKR
Trigger: CCGCTTCCCCGTCGGCGCTGCTGCTCCGCCGTCCTCACGGCTGCAGCTCGTGCGATGAGGGCAACGCAGCTTCTTCGCGCTGCCTCGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp GAAGGCAGCGCGTCCATACCCGCCGCCTCGGCTAGCACTACTTTCTaGTCGCACACGGGGCAGCGCAGCTTGAGCGGCTCTCCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: EGSASIPAASASTTF*SHTGQRSLSGSPAA
Trigger: CGCGGCGGGAGAGCCGCTCAAGCTGCGCTGCCCCGTGTGCGACCAGAAAGTAGTGCTAGCCGAGGCGGCGGGTATGGACGCGCTGCCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp CGTGGTGCTGGCAGAAGCCGAGGCGCTCGGGAAACACTGAGAGGATaGAGAAGGGCGGGCCGGGAAAGGGCGGCCCGAGCCCGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: RGAGRSRGARETLRG*RRAGRERAARARAA
Trigger: AGCAGCTCGGGCTCGGGCCGCCCTTTCCCGGCCCGCCCTTCTCCATCCTCTCAGTGTTTCCCGAGCGCCTCGGCTTCTGCCAGCACCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp ATCCTGCGTGAGGCGTCACAGGCCACGCCGGCTGGTCGGTCGAACTaGCCAGGCCGGGAGCCCAGGGTGCCGAATTTGTGGTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ILREASQATPAGRSN*PGREPRVPNLWWKA
Trigger: CGCCTTCCACCACAAATTCGGCACCCTGGGCTCCCGGCCTGGGCAGTTCGACCGACCAGCCGGCGTGGCCTGTGACGCCTCACGCAGGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp CCGACGACGTGGACGTCTGCGAGGAGGACGACGACGCGGACGAGTTaGAGGAGAGCGGCGCCGGCGAGCCGCACATCTCCTTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: PTTWTSARRTTTRTS*RRAAPASRTSPCTA
Trigger: TGCTGTGCAAGGAGATGTGCGGCTCGCCGGCGCCGCTCTCCTCCAACTCGTCCGCGTCGTCGTCCTCCTCGCAGACGTCCACGTCGTCGG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp CGCACAGGTGCTCCTGGCAGTCGAGGCAGCGCGAAGAAGCTGCGTTaGCCTCATCGCACGAGCTGCAGCCGTGAGGACGGCGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RTGAPGSRGSAKKLR*PHRTSCSREDGGAA
Trigger: TGCTGCTCCGCCGTCCTCACGGCTGCAGCTCGTGCGATGAGGGCAACGCAGCTTCTTCGCGCTGCCTCGACTGCCAGGAGCACCTGTGCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp GTGAGGCGCACGCGCTGGTGCGCTCGGACGCAGTTGTCGCACAGGTaGTCCTGGCAGTCGAGGCAGCGCGAAGAAGCTGCGTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: VRRTRWCARTQLSHR*SWQSRQREEAALPS
Trigger: TGAGGGCAACGCAGCTTCTTCGCGCTGCCTCGACTGCCAGGAGCACCTGTGCGACAACTGCGTCCGAGCGCACCAGCGCGTGCGCCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp TCACACCCCAAGGGCGGCAGAGCTTGCCATCGCTGTCACCCTCACTaGCGAAGCTCAGGCCCGGGAGCCCAATGCCCACGTAGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: SHPKGGRACHRCHPH*RSSGPGAQCPRSCG
Trigger: GCCGCAGCTACGTGGGCATTGGGCTCCCGGGCCTGAGCTTCGGCAGTGAGGGTGACAGCGATGGCAAGCTCTGCCGCCCTTGGGGTGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp CGCACGCGCTGGTGCGCTCGGACGCAGTTGTCGCACAGGTGCTCCTaGCAGTCGAGGCAGCGCGAAGAAGCTGCGTTGCCCTCATCGCAC +
Preference number: 5 (lower is better)
Translates to: RTRWCARTQLSHRCS*QSRQREEAALPSSH
Trigger: GTGCGATGAGGGCAACGCAGCTTCTTCGCGCTGCCTCGACTGCCAGGAGCACCTGTGCGACAACTGCGTCCGAGCGCACCAGCGCGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp GTTGTCGCACAGGTGCTCCTGGCAGTCGAGGCAGCGCGAAGAAGCTaGGTTGCCCTCATCGCACGAGCTGCAGCCGTGAGGACGGCGGAG +
Preference number: 5 (lower is better)
Translates to: VVAQVLLAVEAARRS*VALIARAAAVRTAE
Trigger: CTCCGCCGTCCTCACGGCTGCAGCTCGTGCGATGAGGGCAACGCAGCTTCTTCGCGCTGCCTCGACTGCCAGGAGCACCTGTGCGACAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp GGTCGGTCGAACTGCCCAGGCCGGGAGCCCAGGGTGCCGAATTTGTaGTGGAAGGCGCCGCAGGGCTTGAACACCTGGATGCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GRSNCPGREPRVPNL*WKAPQGLNTWMRLL
Trigger: CAACAACCGCATCCAGGTGTTCAAGCCCTGCGGCGCCTTCCACCACAAATTCGGCACCCTGGGCTCCCGGCCTGGGCAGTTCGACCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCGACGACGCGGACGAGTaGGAGGAGAGCGGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTADDADE*EESGAG
Trigger: GCCGGCGCCGCTCTCCTCCAACTCGTCCGCGTCGTC...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp TGTAGCCCTCCTTGTCTACACTCACACCCCAAGGGCGGCAGAGCTTaGCATCGCTGTCACCCTCACTGCCGAAGCTCAGGCCCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: CSPPCLHSHPKGGRA*HRCHPHCRSSGPGA
Trigger: GGCTCCCGGGCCTGAGCTTCGGCAGTGAGGGTGACAGCGATGGCAAGCTCTGCCGCCCTTGGGGTGTGAGTGTAGACAAGGAGGGCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCCCCTGGAGGGCACGCTaGAGGCCATCGCCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAPWRAR*RPSPVA
Trigger: GGCCACAGGCGATGGCCTCAAGCGTGCCCTCCAGGG...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp GATCTGGATGCGATGATTGTCCTTGTCAGCCACCACGATCCTGCGTaGGGCGTCACAGGCCACGCCGGCTGGTCGGTCGAACTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: DLDAMIVLVSHHDPA*GVTGHAGWSVELPR
Trigger: CCTGGGCAGTTCGACCGACCAGCCGGCGTGGCCTGTGACGCCTCACGCAGGATCGTGGTGGCTGACAAGGACAATCATCGCATCCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp GCGCAGGAACTGCCCATTGCCTGTGCCCTCCGAGCCCAGAAAGCGTaGCGACTGGCAGTCGGGGTGAATAACCAGGAGCCGGTGGTTGTT +
Preference number: 5 (lower is better)
Translates to: AQELPIACALRAQKA*RLAVGVNNQEPVVV
Trigger: AACAACCACCGGCTCCTGGTTATTCACCCCGACTGCCAGTCGGCACGCTTTCTGGGCTCGGAGGGCACAGGCAATGGGCAGTTCCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp AGCGGCGCCGGCGAGCCGCACATCTCCTTGCACAGCAAGCAGATCTaGAAATCGGTCTCGGGGAACGAAGCCATTTGCAACCCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: SGAGEPHISLHSKQI*KSVSGNEAICNPAR
Trigger: CCGGGCTGGGTTGCAAATGGCTTCGTTCCCCGAGACCGATTTCCAGATCTGCTTGCTGTGCAAGGAGATGTGCGGCTCGCCGGCGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp GCCGAAGCTCAGGCCCGGGAGCCCAATGCCCACGTAGCTGCGGCCTaGCTTGACCACCACCTTGAAAGGGCTGTTCTCAATGTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: AEAQAREPNAHVAAA*LDHHLERAVLNVLV
Trigger: AACCAGCACATTGAGAACAGCCCTTTCAAGGTGGTGGTCAAGTCAGGCCGCAGCTACGTGGGCATTGGGCTCCCGGGCCTGAGCTTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp CCTGTGCCCTCCGAGCCCAGAAAGCGTGCCGACTGGCAGTCGGGGTaGATAACCAGGAGCCGGTGGTTGTTGAAGTCAGTGACCACCAAG +
Preference number: 5 (lower is better)
Translates to: PVPSEPRKRADWQSG*ITRSRWLLKSVTTK
Trigger: CTTGGTGGTCACTGACTTCAACAACCACCGGCTCCTGGTTATTCACCCCGACTGCCAGTCGGCACGCTTTCTGGGCTCGGAGGGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp ACCCTGGAGGGCACGCTTGAGGCCATCGCCTGTGGCCTTGGTGAGTaGGGCAAAGGCCCCGCTGCTAACAAAGCCAAAAGACTTGATGGC +
Preference number: 5 (lower is better)
Translates to: TLEGTLEAIACGLGE*GKGPAANKAKRLDG
Trigger: GCCATCAAGTCTTTTGGCTTTGTTAGCAGCGGGGCCTTTGCCCCACTCACCAAGGCCACAGGCGATGGCCTCAAGCGTGCCCTCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGTGCGCTCGGACGCAGTaGTCGCACAGGTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGCARTQ*SHRCSW
Trigger: CCAGGAGCACCTGTGCGACAACTGCGTCCGAGCGCA...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTCCACCCCGGACAGGCTaGCAGTGTGGTTTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLPPRTG*QCGFCG
Trigger: GCCGCAGAAACCACACTGCAAGCCTGTCCGGGGTGG...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp GTTGCCATCAGGGCCCAGGACCACAGCCGACATCAGGTCGCCTCCTaGGAGGCGGGGCTCACCATCGTGGTCATAACCAATGACTGTGAA +
Preference number: 5 (lower is better)
Translates to: VAIRAQDHSRHQVAS*EAGLTIVVITNDCE
Trigger: TTCACAGTCATTGGTTATGACCACGATGGTGAGCCCCGCCTCTCAGGAGGCGACCTGATGTCGGCTGTGGTCCTGGGCCCTGATGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp TTCGATTGTTGCCAAAGTCCACCACAACGATCATTCCGTCGGGGGTaGTGGCGATGCCGGAAGGGCGGTCCATCTGCCCAAAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: FDCCQSPPQRSFRRG*WRCRKGGPSAQSRC
Trigger: GCAGCGGCTTTGGGCAGATGGACCGCCCTTCCGGCATCGCCATCACCCCCGACGGAATGATCGTTGTGGTGGACTTTGGCAACAATCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp TCCAGGGCTTTCTTATGCCTCGCCGTCACGGCTTTGACCTCCGACTaGACAACCTTCGCCTTCATCTCCACCTGTTCCGCCACCGTCTGG +
Preference number: 5 (lower is better)
Translates to: SRAFLCLAVTALTSD*TTFAFISTCSATVW
Trigger: CCAGACGGTGGCGGAACAGGTGGAGATGAAGGCGAAGGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAGGCATAAGAAAGCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp ACCTTCCACAGCAGCTCACACTCGCGTTCCTCCAGGGCTTTCTTATaGCTCGCCGTCACGGCTTTGACCTCCGACTGCACAACCTTCGCC +
Preference number: 5 (lower is better)
Translates to: TFHSSSHSRSSRAFL*LAVTALTSDCTTFA
Trigger: GGCGAAGGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAGGCATAAGAAAGCCCTGGAGGAACGCGAGTGTGAGCTGCTGTGGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp CGGGCCAGTAGGATGTCTAGCGCTCTACCCTCCTCCAGGACCTGCTaGACGGCACTGATGGTGCTCTCAAGCTTGTTGAGGTTTTGCCGC +
Preference number: 5 (lower is better)
Translates to: RASRMSSALPSSRTC*TALMVLSSLLRFCR
Trigger: GCGGCAAAACCTCAACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGGTCCTGGAGGAGGGTAGAGCGCTAGACATCCTACTGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCGCGTGGTGCCGGTGGTaGCTGTGGCCGCCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCAWCRW*LWPPAP
Trigger: GGGAGCGGGCGGCCACAGCAACCACCGGCACCACGC...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp ACTCGCGTTCCTCCAGGGCTTTCTTATGCCTCGCCGTCACGGCTTTaGCCTCCGACTGCACAACCTTCGCCTTCATCTCCACCTGTTCCG +
Preference number: 5 (lower is better)
Translates to: TRVPPGLSYASPSRL*PPTAQPSPSSPPVP
Trigger: CGGAACAGGTGGAGATGAAGGCGAAGGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAGGCATAAGAAAGCCCTGGAGGAACGCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp CACAGCAAGCAGATCTGGAAATCGGTCTCGGGGAACGAAGCCATTTaGAACCCAGCCCGGAGGAGGGAGGAGACCAGAGAGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: HSKQIWKSVSGNEAI*NPARRREETREEEE
Trigger: CTCCTCTTCCTCTCTGGTCTCCTCCCTCCTCCGGGCTGGGTTGCAAATGGCTTCGTTCCCCGAGACCGATTTCCAGATCTGCTTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp CGTATGTCCCATTCTGCTGATCACTCACCTCTGCACCAAACAGGTTaGCATCAGGGCCCAGGACCACAGCCGACATCAGGTCGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: RMSHSADHSPLHQTG*HQGPGPQPTSGRLL
Trigger: CAGGAGGCGACCTGATGTCGGCTGTGGTCCTGGGCCCTGATGGCAACCTGTTTGGTGCAGAGGTGAGTGATCAGCAGAATGGGACATACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp GTCAGTGACCACCAAGTGGCCCTCATGGTTGAAGGCCACACCCCGTaGGGAGTCAAAGTGCTTCCAGAGAGCCCCCTCGAAGCCATACTT +
Preference number: 5 (lower is better)
Translates to: VSDHQVALMVEGHTP*GVKVLPESPLEAIL
Trigger: AAGTATGGCTTCGAGGGGGCTCTCTGGAAGCACTTTGACTCCCCACGGGGTGTGGCCTTCAACCATGAGGGCCACTTGGTGGTCACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGACCTGGATGCGGTTGTaGCTGCGGTCGGCGACAATG +
Preference number: 5 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGTWMRL*LRSATM
Trigger: CATTGTCGCCGACCGCAGCAACAACCGCATCCAGGT...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp GACACCATCAGGCCCAAACAGCTGGATCCGGTGGTTCCTCGTGTCTaGGACCAGGATCTTGCCCTCAGAATTCACCGCCACATCCCAAGG +
Preference number: 5 (lower is better)
Translates to: DTIRPKQLDPVVPRV*DQDLALRIHRHIPR
Trigger: CCTTGGGATGTGGCGGTGAATTCTGAGGGCAAGATCCTGGTCTCAGACACGAGGAACCACCGGATCCAGCTGTTTGGGCCTGATGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp ATGGCGATGCCGGAAGGGCGGTCCATCTGCCCAAAGCCGCTGCCTTaGGCACCAAACTTGCACAGGAAGCTGCCGTTGGATTCAAACATC +
Preference number: 5 (lower is better)
Translates to: MAMPEGRSICPKPLP*APNLHRKLPLDSNI
Trigger: GATGTTTGAATCCAACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTGGGCAGATGGACCGCCCTTCCGGCATCGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp TCTCGGGCCAGTAGGATGTCTAGCGCTCTACCCTCCTCCAGGACCTaGTGCACGGCACTGATGGTGCTCTCAAGCTTGTTGAGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: SRASRMSSALPSSRT*CTALMVLSSLLRFC
Trigger: GCAAAACCTCAACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGGTCCTGGAGGAGGGTAGAGCGCTAGACATCCTACTGGCCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp AGGAGCCGGTGGTTGTTGAAGTCAGTGACCACCAAGTGGCCCTCATaGTTGAAGGCCACACCCCGTGGGGAGTCAAAGTGCTTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: RSRWLLKSVTTKWPS*LKATPRGESKCFQR
Trigger: TCTCTGGAAGCACTTTGACTCCCCACGGGGTGTGGCCTTCAACCATGAGGGCCACTTGGTGGTCACTGACTTCAACAACCACCGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTCGATGCTCAGCTGGATaGCCTGTCGTCCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLRCSAG*PVVPAG
Trigger: CCCAGCAGGGACGACAGGCAATCCAGCTGAGCATCG...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCTGCAGGTACAGAGACTaGGCTTTCACCTGGCGGATC +
Preference number: 5 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTACRYRD*AFTWRI
Trigger: GATCCGCCAGGTGAAAGCCAAGTCTCTGTACCTGCA...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp TGGATTCAAACATCTGTACCCGATGGTTCCTGGAATCCGCCACAATaGTGCGCCCTTCCTGGTCCACAGCTACCCCTTGTGGGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: WIQTSVPDGSWNPPQ*CALPGPQLPLVGAG
Trigger: TCCTGCGCCCACAAGGGGTAGCTGTGGACCAGGAAGGGCGCATCATTGTGGCGGATTCCAGGAACCATCGGGTACAGATGTTTGAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp CTGCGGCCTGACTTGACCACCACCTTGAAAGGGCTGTTCTCAATGTaGTGGTTGCACAGTGTCACAGATACCAGGTGCTCACCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LRPDLTTTLKGLFSM*WLHSVTDTRCSPSS
Trigger: GCTGGAGGGTGAGCACCTGGTATCTGTGACACTGTGCAACCAGCACATTGAGAACAGCCCTTTCAAGGTGGTGGTCAAGTCAGGCCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp CGGCCTGACTTGACCACCACCTTGAAAGGGCTGTTCTCAATGTGCTaGTTGCACAGTGTCACAGATACCAGGTGCTCACCCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RPDLTTTLKGLFSMC*LHSVTDTRCSPSSW
Trigger: CCAGCTGGAGGGTGAGCACCTGGTATCTGTGACACTGTGCAACCAGCACATTGAGAACAGCCCTTTCAAGGTGGTGGTCAAGTCAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGTCTGAGACCAGGATCTaGCCCTCAGAATTCACCGCC +
Preference number: 5 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGSETRI*PSEFTA
Trigger: GGCGGTGAATTCTGAGGGCAAGATCCTGGTCTCAGA...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCCGCAGGAACTGCCCATaGCCTGTGCCCTCCGAGCCC +
Preference number: 5 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCRRNCP*PVPSEP
Trigger: GGGCTCGGAGGGCACAGGCAATGGGCAGTTCCTGCG...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 90 bp AACTTGAGGAGGAACTGGCCCTCGAACGTGAAGATCTGGATGCGATaGTTGTCCTTGTCAGCCACCACGATCCTGCGTGAGGCGTCACAG +
Preference number: 5 (lower is better)
Translates to: NLRRNWPSNVKIWMR*LSLSATTILREASQ
Trigger: CTGTGACGCCTCACGCAGGATCGTGGTGGCTGACAAGGACAATCATCGCATCCAGATCTTCACGTTCGAGGGCCAGTTCCTCCTCAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp ACCTGCTGCACGGCACTGATGGTGCTCTCAAGCTTGTTGAGGTTTTaGCGCAGCTTCTCCACCTGCAGGTACAGAGACTTGGCTTTCACC +
Preference number: 5 (lower is better)
Translates to: TCCTALMVLSSLLRF*RSFSTCRYRDLAFT
Trigger: GGTGAAAGCCAAGTCTCTGTACCTGCAGGTGGAGAAGCTGCGGCAAAACCTCAACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTAAGCTTGTTGAGGTTTaGCCGCAGCTTCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLKLVEV*PQLLHL
Trigger: CAGGTGGAGAAGCTGCGGCAAAACCTCAACAAGCTT...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTGCTCTCAAGCTTGTaGAGGTTTTGCCGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLVLSSL*RFCRSF
Trigger: GAAGCTGCGGCAAAACCTCAACAAGCTTGAGAGCAC...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCCCATCGCCTGTGGCCTaGGTGAGTGGGGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCPSPVA*VSGAKA
Trigger: GGCCTTTGCCCCACTCACCAAGGCCACAGGCGATGG...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTACCAGGAGCCGGTGGTaGTTGAAGTCAGTGACCACC +
Preference number: 5 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLTRSRW*LKSVTT
Trigger: GGTGGTCACTGACTTCAACAACCACCGGCTCCTGGT...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp AGGATGACGACTCCCTTCTTTGACCCAACTCCTGGCTACCTGGCATTACCCGGGTCAGTATTTGGGGCATaGCAGGAACCCACTGGGTTC +
Preference number: 5 (lower is better)
Translates to: RMTTPFFDPTPGYLALPGSVFGA*QEPTGF
Trigger: GAACCCAGTGGGTTCCTGCAATGCCCCAAATACTGA...CCCGGGTAATGCCAGGTAGCCAGGAGTTGGGTCAAAGAAGGGAGTCGTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp TCTGCCCAAAGCCGCTGCCTTGAGCACCAAACTTGCACAGGAAGCTaGCGTTGGATTCAAACATCTGTACCCGATGGTTCCTGGAATCCG +
Preference number: 5 (lower is better)
Translates to: SAQSRCLEHQTCTGS*RWIQTSVPDGSWNP
Trigger: CGGATTCCAGGAACCATCGGGTACAGATGTTTGAATCCAACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCACAAAGCCAAAAGACTaGATGGCAAGGTACAGTGCC +
Preference number: 5 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTATKPKD*MARYSA
Trigger: GGCACTGTACCTTGCCATCAAGTCTTTTGGCTTTGT...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCCAAGGGCGGCAGAGCTaGCCATCGCTGTCACCCTCA +
Preference number: 5 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCQGRQS*PSLSPS
Trigger: TGAGGGTGACAGCGATGGCAAGCTCTGCCGCCCTTG...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GCTTCGCACCAATCCCTATGGGTCAGGAGTCAACCACGGGCAGGAAAAACCGCCGTCACTGACGTTTGTTaGAGAGTCCCTCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: ASHQSLWVRSQPRAGKTAVTDVC*RVPLFP
Trigger: AGGGAAAAGAGGGACTCTCAAACAAACGTCAGTGAC...GGCGGTTTTTCCTGCCCGTGGTTGACTCCTGACCCATAGGGATTGGTGCGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp TCGAAGCCATACTTGTTTAGGAAGACACCATCAGGCCCAAACAGCTaGATCCGGTGGTTCCTCGTGTCTGAGACCAGGATCTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: SKPYLFRKTPSGPNS*IRWFLVSETRILPS
Trigger: TGAGGGCAAGATCCTGGTCTCAGACACGAGGAACCACCGGATCCAGCTGTTTGGGCCTGATGGTGTCTTCCTAAACAAGTATGGCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp AACTTGCACAGGAAGCTGCCGTTGGATTCAAACATCTGTACCCGATaGTTCCTGGAATCCGCCACAATGATGCGCCCTTCCTGGTCCACA +
Preference number: 5 (lower is better)
Translates to: NLHRKLPLDSNICTR*FLESATMMRPSWST
Trigger: TGTGGACCAGGAAGGGCGCATCATTGTGGCGGATTCCAGGAACCATCGGGTACAGATGTTTGAATCCAACGGCAGCTTCCTGTGCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp CAAAGCCGCTGCCTTGAGCACCAAACTTGCACAGGAAGCTGCCGTTaGATTCAAACATCTGTACCCGATGGTTCCTGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: QSRCLEHQTCTGSCR*IQTSVPDGSWNPPQ
Trigger: TTGTGGCGGATTCCAGGAACCATCGGGTACAGATGTTTGAATCCAACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAAACGGGGCAGCGCAGCTaGAGCGGCTCTCCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: YHFTGSIPAEKISTFICKTGQRS*SGSPAA
Trigger: CGCGGCGGGAGAGCCGCTCAAGCTGCGCTGCCCCGT...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 90 bp ATGGTGCTCTCAAGCTTGTTGAGGTTTTGCCGCAGCTTCTCCACCTaGAGGTACAGAGACTTGGCTTTCACCTGGCGGATCTTTTCTACC +
Preference number: 5 (lower is better)
Translates to: MVLSSLLRFCRSFST*RYRDLAFTWRIFST
Trigger: GGTAGAAAAGATCCGCCAGGTGAAAGCCAAGTCTCTGTACCTGCAGGTGGAGAAGCTGCGGCAAAACCTCAACAAGCTTGAGAGCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 90 bp TACTTGTTTAGGAAGACACCATCAGGCCCAAACAGCTGGATCCGGTaGTTCCTCGTGTCTGAGACCAGGATCTTGCCCTCAGAATTCACC +
Preference number: 5 (lower is better)
Translates to: YLFRKTPSGPNSWIR*FLVSETRILPSEFT
Trigger: GGTGAATTCTGAGGGCAAGATCCTGGTCTCAGACACGAGGAACCACCGGATCCAGCTGTTTGGGCCTGATGGTGTCTTCCTAAACAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTACGAGGATTCGATTGTaGCCAAAGTCCACCACAACG +
Preference number: 5 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLTRIRL*PKSTTT
Trigger: CGTTGTGGTGGACTTTGGCAACAATCGAATCCTCGT...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTTGGAGTTCCTATAGTTaGGGGGTGCCTTGTTCTTTA +
Preference number: 5 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLWSSYS*GVPCSL
Trigger: TAAAGAACAAGGCACCCCCAAACTATAGGAACTCCA...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAACCCCATGCCGGCCCATaGTGCACTCACGACAGATGG +
Preference number: 5 (lower is better)
Translates to: GSVSFSALLLGCKMALKQPHAGP*CTHDRW
Trigger: CCATCTGTCGTGAGTGCACAATGGGCCGGCATGGGG...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCGTCCACAGCTACCCCTaGTGGGCGCAGGAACTGCCC +
Preference number: 5 (lower is better)
Translates to: VSFSALLLGCKMALKQTCVHSYP*WAQELP
Trigger: GGGCAGTTCCTGCGCCCACAAGGGGTAGCTGTGGAC...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTTCAGCTACATCTGCTTaGCACTTGAAAGACAGACAA +
Preference number: 5 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLSATSA*HLKDRQ
Trigger: TTGTCTGTCTTTCAAGTGCAAAGCAGATGTAGCTGA...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCGAGGAGTTAGTGCACTaGGGGTACAACCCAGGTCAC +
Preference number: 5 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCEELVH*GYNPGH
Trigger: GTGACCTGGGTTGTACCCCAAGTGCACTAACTCCTC...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCGGGGAACGAAGCCATTaGCAACCCAGCCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: VSFSALLLGCKMALKQTCGERSH*QPSPEE
Trigger: CTCCTCCGGGCTGGGTTGCAAATGGCTTCGTTCCCC...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCAAGGCGCCGCAGGGCTaGAACACCTGGATGCGGTTG +
Preference number: 5 (lower is better)
Translates to: VSFSALLLGCKMALKQTCKAPQG*NTWMRL
Trigger: CAACCGCATCCAGGTGTTCAAGCCCTGCGGCGCCTT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTACATCTGCTTTGCACTaGAAAGACAGACAATGCCCA +
Preference number: 5 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLTSALH*KDRQCP
Trigger: TGGGCATTGTCTGTCTTTCAAGTGCAAAGCAGATGT...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTGTTCTTGGGGGAAAAGCCAGATaGCTAAGAACTACTTGGATT +
Preference number: 5 (lower is better)
Translates to: GRPCPFCGVPIVWGCLVLGGKAR*LRTTWI
Trigger: AATCCAAGTAGTTCTTAGCAATCTGGCTTTTCCCCC...AAGAACAAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAGAGCCGCACATCTCCTaGCACAGCAAGCAGATCTGG +
Preference number: 5 (lower is better)
Translates to: GSVSFSALLLGCKMALKQEPHIS*HSKQIW
Trigger: CCAGATCTGCTTGCTGTGCAAGGAGATGTGCGGCTC...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATAACCGCGTCGAGCAGGTaGCTAAGCAGGAAGGCGGAC +
Preference number: 5 (lower is better)
Translates to: TSQYSNLYIQTQWASPHITASSR*LSRKAD
Trigger: GTCCGCCTTCCTGCTTAGCAACCTGCTCGACGCGGT...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATACGCGAAGAAGCTGCGTaGCCCTCATCGCACGAGCTG +
Preference number: 5 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEIREEAA*PSSHEL
Trigger: CAGCTCGTGCGATGAGGGCAACGCAGCTTCTTCGCG...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATACTCGCCGTCACGGCTTaGACCTCCGACTGCACAACC +
Preference number: 5 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEILAVTA*TSDCTT
Trigger: GGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAG...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAACCCAGGGTGCCGAATTaGTGGTGGAAGGCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: YHFTGSIPAEKISTFICKPRVPN*WWKAPQ
Trigger: CTGCGGCGCCTTCCACCACAAATTCGGCACCCTGGG...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp CACATCCAGTGCCCTCCCAGCCATACAGATGCCAGGCTTGTGCATATCATGCCCACAGAGGAACAGAAGTaGATCCATAAGTCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: HIQCPPSHTDARLVHIMPTEEQK*IHKSLN
Trigger: GTTTAAAGACTTATGGATCAACTTCTGTTCCTCTGT...GGGCATGATATGCACAAGCCTGGCATCTGTATGGCTGGGAGGGCACTGGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGTCAGGGCAGACCCTGCCCTTTCTGTGGAGTTCCTATAGTTTGGGGGTGCCTTCTTTTGAATCTTTTATaGCATGCAGTTCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: GQGRPCPFCGVPIVWGCLLLNLL*HAVLLC
Trigger: ACAGAGGAGAACTGCATGCAATAAAAGATTCAAAAG...AAGGCACCCCCAAACTATAGGAACTCCACAGAAAGGGCAGGGTCTGCCCTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCTACCCCACCCAACCCTaGCCACCTGACCAGATCAGA +
Preference number: 5 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTYPTQP*PPDQIR
Trigger: TCTGATCTGGTCAGGTGGCAAGGGTTGGGTGGGGTA...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATATCTGCACCAAACAGGTaGCCATCAGGGCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEISAPNR*PSGPRT
Trigger: GGTCCTGGGCCCTGATGGCAACCTGTTTGGTGCAGA...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATAAACACCTGGATGCGGTaGTTGCTGCGGTCGGCGACA +
Preference number: 5 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEINTWMR*LLRSAT
Trigger: TGTCGCCGACCGCAGCAACAACCGCATCCAGGTGTT...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAAGGAGCCGGTGGTTGTaGAAGTCAGTGACCACCAAG +
Preference number: 5 (lower is better)
Translates to: GSVSFSALLLGCKMALKQRSRWL*KSVTTK
Trigger: CTTGGTGGTCACTGACTTCAACAACCACCGGCTCCT...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCATGGTGCTCTCAAGCTaGTTGAGGTTTTGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTMVLSS*LRFCRS
Trigger: GCTGCGGCAAAACCTCAACAAGCTTGAGAGCACCAT...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATACCCAAAGCCGCTGCCTaGAGCACCAAACTTGCACAG +
Preference number: 5 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIPKAAA*STKLAQ
Trigger: CTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTGGG...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp CATACTTACTCCCCAGAAACCTTTTTATTCTCCTACCTCATAATACCCAGGACCATACAGATGCCAGGCTaGTGCATATCATGCCCCACG +
Preference number: 5 (lower is better)
Translates to: HTYSPETFLFSYLIIPRTIQMPG*CISCPT
Trigger: CGTGGGGCATGATATGCACAAGCCTGGCATCTGTAT...GGTCCTGGGTATTATGAGGTAGGAGAATAAAAAGGTTTCTGGGGAGTAAGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCGACTTGACCACCACCTaGAAAGGGCTGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: VSFSALLLGCKMALKQTCDLTTT*KGLFSM
Trigger: CATTGAGAACAGCCCTTTCAAGGTGGTGGTCAAGTC...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TTGTGTTTCCTTGGCTCAATCTACAGAATACACCCCACCACACACATCCAGTGCGGGCTCCTCCAGAATTaGGTTCTTATTTCAGTATTT +
Preference number: 5 (lower is better)
Translates to: LCFLGSIYRIHPTTHIQCGLLQN*VLISVF
Trigger: AAATACTGAAATAAGAACCAAATTCTGGAGGAGCCC...GCACTGGATGTGTGTGGTGGGGTGTATTCTGTAGATTGAGCCAAGGAAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCTTCTCAATGTGCTGGTaGCACAGTGTCACAGATACC +
Preference number: 5 (lower is better)
Translates to: VSFSALLLGCKMALKQTCFSMCW*HSVTDT
Trigger: GGTATCTGTGACACTGTGCAACCAGCACATTGAGAA...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TGTTTCTCAAATACCAGTCATGCACCATTTTGGGTACAGAAAGGTAAGGAGATACACAGGAAGCTGCCGTaGGATTCAAACATCTGTACC +
Preference number: 5 (lower is better)
Translates to: CFSNTSHAPFWVQKGKEIHRKLP*DSNICT
Trigger: GGTACAGATGTTTGAATCCAACGGCAGCTTCCTGTG...TATCTCCTTACCTTTCTGTACCCAAAATGGTGCATGACTGGTATTTGAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAACATGCAAGACGAGGATTCGATaGTTGCCAAAGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: VSFSALLLGCKMALKQTCKTRIR*LPKSTT
Trigger: TGTGGTGGACTTTGGCAACAATCGAATCCTCGTCTT...GCATGTTTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAAAGCAACTTGATTGACTaGTCACACTGTCCCCATCAT +
Preference number: 5 (lower is better)
Translates to: GSVSFSALLLGCKMALKQSNLID*SHCPHH
Trigger: ATGATGGGGACAGTGTGACAAGTCAATCAAGTTGCT...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAACATGGAGCGAAAATCTaGGCTTTTCGATCACATCCA +
Preference number: 5 (lower is better)
Translates to: GSVSFSALLLGCKMALKQHGAKI*AFRSHP
Trigger: TGGATGTGATCGAAAAGCCAAGATTTTCGCTCCATG...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATACCAGAAGCACAAGTTTaGTACCCAAGTCCAGCTTAC +
Preference number: 5 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIPEAQV*YPSPAY
Trigger: GTAAGCTGGACTTGGGTACAAAACTTGTGCTTCTGG...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp GGCAGTGTGTCATTTTCAGCTTTACTACTTGGGTGCAAGATGGCTTTGAAACAATCAGGTTGGGACAATTaGGTTTCTAGATCCTTTATG +
Preference number: 5 (lower is better)
Translates to: GSVSFSALLLGCKMALKQSGWDN*VSRSFM
Trigger: CATAAAGGATCTAGAAACCAAATTGTCCCAACCTGA...TTGTTTCAAAGCCATCTTGCACCCAAGTAGTAAAGCTGAAAATGACACACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAAGGAGCCAGCAGCAGTTaGAAGCTACTTTCCAACTTT +
Preference number: 5 (lower is better)
Translates to: YHFTGSIPAEKISTFICKGASSS*KLLSNF
Trigger: AAAGTTGGAAAGTAGCTTCAAACTGCTGCTGGCTCC...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp TATCACTTCACAGGCTCAATCCCTGCAGAAAAGATAAGTACATTCATCTGTAAATTGAACTGCCCATTCTaGGTTCCTTTCTCACCAAAC +
Preference number: 5 (lower is better)
Translates to: YHFTGSIPAEKISTFICKLNCPF*VPFSPN
Trigger: GTTTGGTGAGAAAGGAACCAAGAATGGGCAGTTCAA...TTTACAGATGAATGTACTTATCTTTTCTGCAGGGATTGAGCCTGTGAAGTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS-3UTR CAA 90 bp ACATCTCAATACTCAAACCTATATATCCAAACCCAATGGGCATCTCCACACATACCTAAAGGGTATTATTaGCAGACATTCGAAATACAG +
Preference number: 5 (lower is better)
Translates to: TSQYSNLYIQTQWASPHIPKGYY*QTFEIQ
Trigger: CTGTATTTCGAATGTCTGCAAATAATACCCTTTAGG...TATGTGTGGAGATGCCCATTGGGTTTGGATATATAGGTTTGAGTATTGAGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp TTGCTGTGGCCGCCCGCTCCCGCCGGAGCGCCGGCGCGCCCGTTCTaGGGCGGCGGCTCGTCGGCAGTGGCCACCACCGCGTCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LLWPPAPAGAPARPF*GGGSSAVATTASSR
Trigger: CCTGCTCGACGCGGTGGTGGCCACTGCCGACGAGCCGCCGCCCAAGAACGGGCGCGCCGGCGCTCCGGCGGGAGCGGGCGGCCACAGCAA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp GCCTCGGCTAGCACTACTTTCTGGTCGCACACGGGGCAGCGCAGCTaGAGCGGCTCTCCCGCCGCGCCGCCGCCCGCCGCCGGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: ASASTTFWSHTGQRS*SGSPAAPPPAAGSR
Trigger: CCGGCTGCCGGCGGCGGGCGGCGGCGCGGCGGGAGAGCCGCTCAAGCTGCGCTGCCCCGTGTGCGACCAGAAAGTAGTGCTAGCCGAGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp GCACTACTTTCTGGTCGCACACGGGGCAGCGCAGCTTaGGCGGCTCTCCCGCCGCGCCGCCGCCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: ALLSGRTRGSAA*AALPPRRRPPP
Trigger: CGGCGGCGGGCGGCGGCGCGGCGGGAGAGCCGCTCAAGCTGCGCTGCCCCGTGTGCGACCAGAAAGTAGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp AGCACTACTTTCTGGTCGCACACGGGGCAGCGCAGCTaGAGCGGCTCTCCCGCCGCGCCGCCGCCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: STTFWSHTGQRS*SGSPAAPPPAA
Trigger: GGCGGCGGGCGGCGGCGCGGCGGGAGAGCCGCTCAAGCTGCGCTGCCCCGTGTGCGACCAGAAAGTAGTGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp GACCCGGCGGGCCGCGCTCGATGTAGTGGTCCTTGGTaGGGCGCACGCGCTGGTGCGCTCGGACGCAGTTGT +
Preference number: 6 (lower is better)
Translates to: DPAGRARCSGPW*GARAGALGRSC
Trigger: ACAACTGCGTCCGAGCGCACCAGCGCGTGCGCCTCACCAAGGACCACTACATCGAGCGCGGCCCGCCGGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp GAGGCGTCACAGGCCACGCCGGCTGGTCGGTCGAACTaGCCAGGCCGGGAGCCCAGGGTGCCGAATTTGTGG +
Preference number: 6 (lower is better)
Translates to: EASQATPAGRSN*PGREPRVPNLW
Trigger: CCACAAATTCGGCACCCTGGGCTCCCGGCCTGGGCAGTTCGACCGACCAGCCGGCGTGGCCTGTGACGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp CCCGACGACGTGGACGTCTGCGAGGAGGACGACGACGCGGACGAGTaGGAGGAGAGCGGCGCCGGCGAGCCGCACATCTCCTTGCACAGC +
Preference number: 6 (lower is better)
Translates to: PDDVDVCEEDDDADE*EESGAGEPHISLHS
Trigger: GCTGTGCAAGGAGATGTGCGGCTCGCCGGCGCCGCTCTCCTCCAACTCGTCCGCGTCGTCGTCCTCCTCGCAGACGTCCACGTCGTCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp TTGGGCGGCGGCTCGTCGGCAGTGGCCACCACCGCGTCGAGCAGGTaGCTAAGCAGGAAGGCGGACGAAGGCAGCGCGTCCATACCCGCC +
Preference number: 6 (lower is better)
Translates to: LGGGSSAVATTASSR*LSRKADEGSASIPA
Trigger: GGCGGGTATGGACGCGCTGCCTTCGTCCGCCTTCCTGCTTAGCAACCTGCTCGACGCGGTGGTGGCCACTGCCGACGAGCCGCCGCCCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp AGCGCGAAGAAGCTGCGTTGCCCTCATCGCACGAGCTaGAGCCGTGAGGACGGCGGAGCAGCAGCGCCGACG +
Preference number: 6 (lower is better)
Translates to: SAKKLRCPHRTS*SREDGGAAAPT
Trigger: CGTCGGCGCTGCTGCTCCGCCGTCCTCACGGCTGCAGCTCGTGCGATGAGGGCAACGCAGCTTCTTCGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp TGGACGTCTGCGAGGAGGACGACGACGCGGACGAGTTaGAGGAGAGCGGCGCCGGCGAGCCGCACATCTCCT +
Preference number: 6 (lower is better)
Translates to: WTSARRTTTRTS*RRAAPASRTSP
Trigger: AGGAGATGTGCGGCTCGCCGGCGCCGCTCTCCTCCAACTCGTCCGCGTCGTCGTCCTCCTCGCAGACGTCCA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp GGCTCGTCGGCAGTGGCCACCACCGCGTCGAGCAGGTaGCTAAGCAGGAAGGCGGACGAAGGCAGCGCGTCC +
Preference number: 6 (lower is better)
Translates to: GSSAVATTASSR*LSRKADEGSAS
Trigger: GGACGCGCTGCCTTCGTCCGCCTTCCTGCTTAGCAACCTGCTCGACGCGGTGGTGGCCACTGCCGACGAGCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp TTGGTGAGGCGCACGCGCTGGTGCGCTCGGACGCAGTaGTCGCACAGGTGCTCCTGGCAGTCGAGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: LVRRTRWCARTQ*SHRCSWQSRQR
Trigger: GCGCTGCCTCGACTGCCAGGAGCACCTGTGCGACAACTGCGTCCGAGCGCACCAGCGCGTGCGCCTCACCAA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp GCTCCTGGCAGTCGAGGCAGCGCGAAGAAGCTGCGTTaGCCTCATCGCACGAGCTGCAGCCGTGAGGACGGC +
Preference number: 6 (lower is better)
Translates to: APGSRGSAKKLR*PHRTSCSREDG
Trigger: GCCGTCCTCACGGCTGCAGCTCGTGCGATGAGGGCAACGCAGCTTCTTCGCGCTGCCTCGACTGCCAGGAGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp ACGCGCTGGTGCGCTCGGACGCAGTTGTCGCACAGGTaGTCCTGGCAGTCGAGGCAGCGCGAAGAAGCTGCG +
Preference number: 6 (lower is better)
Translates to: TRWCARTQLSHR*SWQSRQREEAA
Trigger: CGCAGCTTCTTCGCGCTGCCTCGACTGCCAGGAGCACCTGTGCGACAACTGCGTCCGAGCGCACCAGCGCGT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp GCTGGTCGGTCGAACTGCCCAGGCCGGGAGCCCAGGGTGCCGAATTaGTGGTGGAAGGCGCCGCAGGGCTTGAACACCTGGATGCGGTTG +
Preference number: 6 (lower is better)
Translates to: AGRSNCPGREPRVPN*WWKAPQGLNTWMRL
Trigger: CAACCGCATCCAGGTGTTCAAGCCCTGCGGCGCCTTCCACCACAAATTCGGCACCCTGGGCTCCCGGCCTGGGCAGTTCGACCGACCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp CAGGTGCTCCTGGCAGTCGAGGCAGCGCGAAGAAGCTaGGTTGCCCTCATCGCACGAGCTGCAGCCGTGAGG +
Preference number: 6 (lower is better)
Translates to: QVLLAVEAARRS*VALIARAAAVR
Trigger: CCTCACGGCTGCAGCTCGTGCGATGAGGGCAACGCAGCTTCTTCGCGCTGCCTCGACTGCCAGGAGCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp AAGGGCGGCAGAGCTTGCCATCGCTGTCACCCTCACTaGCGAAGCTCAGGCCCGGGAGCCCAATGCCCACGT +
Preference number: 6 (lower is better)
Translates to: KGGRACHRCHPH*RSSGPGAQCPR
Trigger: ACGTGGGCATTGGGCTCCCGGGCCTGAGCTTCGGCAGTGAGGGTGACAGCGATGGCAAGCTCTGCCGCCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp GCGTCCATACCCGCCGCCTCGGCTAGCACTACTTTCTaGTCGCACACGGGGCAGCGCAGCTTGAGCGGCTCT +
Preference number: 6 (lower is better)
Translates to: ASIPAASASTTF*SHTGQRSLSGS
Trigger: AGAGCCGCTCAAGCTGCGCTGCCCCGTGTGCGACCAGAAAGTAGTGCTAGCCGAGGCGGCGGGTATGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp TGGTGCGCTCGGACGCAGTTGTCGCACAGGTGCTCCTaGCAGTCGAGGCAGCGCGAAGAAGCTGCGTTGCCC +
Preference number: 6 (lower is better)
Translates to: WCARTQLSHRCS*QSRQREEAALP
Trigger: GGGCAACGCAGCTTCTTCGCGCTGCCTCGACTGCCAGGAGCACCTGTGCGACAACTGCGTCCGAGCGCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp GGGGGTGTGAACATGACTCGGTCGTCTTCCTGGGGCTaGAGGAGGCTCCGCACGGTCTTCAGCTCCTGCACC +
Preference number: 6 (lower is better)
Translates to: GGVNMTRSSSWG*RRLRTVFSSCT
Trigger: GGTGCAGGAGCTGAAGACCGTGCGGAGCCTCCTGCAGCCCCAGGAAGACGACCGAGTCATGTTCACACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp CTGCCCATTGCCTGTGCCCTCCGAGCCCAGAAAGCGTaGCGACTGGCAGTCGGGGTGAATAACCAGGAGCCG +
Preference number: 6 (lower is better)
Translates to: LPIACALRAQKA*RLAVGVNNQEP
Trigger: CGGCTCCTGGTTATTCACCCCGACTGCCAGTCGGCACGCTTTCTGGGCTCGGAGGGCACAGGCAATGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp AACTGCCCAGGCCGGGAGCCCAGGGTGCCGAATTTGTaGTGGAAGGCGCCGCAGGGCTTGAACACCTGGATG +
Preference number: 6 (lower is better)
Translates to: NCPGREPRVPNL*WKAPQGLNTWM
Trigger: CATCCAGGTGTTCAAGCCCTGCGGCGCCTTCCACCACAAATTCGGCACCCTGGGCTCCCGGCCTGGGCAGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp CCCTGGAGGGCACGCTTGAGGCCATCGCCTGTGGCCTaGGTGAGTGGGGCAAAGGCCCCGCTGCTAACAAAG +
Preference number: 6 (lower is better)
Translates to: PWRARLRPSPVA*VSGAKAPLLTK
Trigger: CTTTGTTAGCAGCGGGGCCTTTGCCCCACTCACCAAGGCCACAGGCGATGGCCTCAAGCGTGCCCTCCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp GCGATGATTGTCCTTGTCAGCCACCACGATCCTGCGTaGGGCGTCACAGGCCACGCCGGCTGGTCGGTCGAA +
Preference number: 6 (lower is better)
Translates to: AMIVLVSHHDPA*GVTGHAGWSVE
Trigger: TTCGACCGACCAGCCGGCGTGGCCTGTGACGCCTCACGCAGGATCGTGGTGGCTGACAAGGACAATCATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp TGGAGGAGAGCGGCGCCGGCGAGCCGCACATCTCCTTaGACAGCAAGCAGATCTGGAAATCGGTCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: WRRAAPASRTSP*TASRSGNRSRG
Trigger: TCCCCGAGACCGATTTCCAGATCTGCTTGCTGTGCAAGGAGATGTGCGGCTCGCCGGCGCCGCTCTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp GCCTGCTCGATGCTCAGCTGGATTGCCTGTCGTCCCTaGTGGGCATCTGCCAGCAGCTGGATGGTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: ACSMLSWIACRP*WASASSWMVSA
Trigger: GGCACTCACCATCCAGCTGCTGGCAGATGCCCAGCAGGGACGACAGGCAATCCAGCTGAGCATCGAGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp GGATGCGATGATTGTCCTTGTCAGCCACCACGATCCTaGGTGAGGCGTCACAGGCCACGCCGGCTGGTCGGT +
Preference number: 6 (lower is better)
Translates to: GCDDCPCQPPRS*VRRHRPRRLVG
Trigger: ACCGACCAGCCGGCGTGGCCTGTGACGCCTCACGCAGGATCGTGGTGGCTGACAAGGACAATCATCGCATCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp ACTGTGAAGGAGGCCACCTTACCCTGGAGGGCACGCTaGAGGCCATCGCCTGTGGCCTTGGTGAGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: TVKEATLPWRAR*RPSPVALVSGA
Trigger: TGCCCCACTCACCAAGGCCACAGGCGATGGCCTCAAGCGTGCCCTCCAGGGTAAGGTGGCCTCCTTCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp AGGGTGCCGAATTTGTGGTGGAAGGCGCCGCAGGGCTaGAACACCTGGATGCGGTTGTTGCTGCGGTCGGCG +
Preference number: 6 (lower is better)
Translates to: RVPNLWWKAPQG*NTWMRLLLRSA
Trigger: CGCCGACCGCAGCAACAACCGCATCCAGGTGTTCAAGCCCTGCGGCGCCTTCCACCACAAATTCGGCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp AGGGCCCAGGACCACAGCCGACATCAGGTCGCCTCCTaGGAGGCGGGGCTCACCATCGTGGTCATAACCAAT +
Preference number: 6 (lower is better)
Translates to: RAQDHSRHQVAS*EAGLTIVVITN
Trigger: ATTGGTTATGACCACGATGGTGAGCCCCGCCTCTCAGGAGGCGACCTGATGTCGGCTGTGGTCCTGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp CCTTGTCTACACTCACACCCCAAGGGCGGCAGAGCTTaGCATCGCTGTCACCCTCACTGCCGAAGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: PCLHSHPKGGRA*HRCHPHCRSSG
Trigger: GCCTGAGCTTCGGCAGTGAGGGTGACAGCGATGGCAAGCTCTGCCGCCCTTGGGGTGTGAGTGTAGACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp CGATGCCGGAAGGGCGGTCCATCTGCCCAAAGCCGCTaGCTTGAGCACCAAACTTGCACAGGAAGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: RCRKGGPSAQSR*LEHQTCTGSCR
Trigger: ACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTGGGCAGATGGACCGCCCTTCCGGCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp TCACAGTACAGGTGCAGCACCTCGTCGTCGTGGTGCTaGCAGAAGCCGAGGCGCTCGGGAAACACTGAGAGG +
Preference number: 6 (lower is better)
Translates to: SQYRCSTSSSWC*QKPRRSGNTER
Trigger: CCTCTCAGTGTTTCCCGAGCGCCTCGGCTTCTGCCAGCACCACGACGACGAGGTGCTGCACCTGTACTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp CTGGGCATCTGCCAGCAGCTGGATGGTGAGTGCCCGTaGGTCCTGCAGTGCCTCCTGGAGGTAGATGAAGCT +
Preference number: 6 (lower is better)
Translates to: LGICQQLDGECP*VLQCLLEVDEA
Trigger: AGCTTCATCTACCTCCAGGAGGCACTGCAGGACTCACGGGCACTCACCATCCAGCTGCTGGCAGATGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp CAGGCCCGGGAGCCCAATGCCCACGTAGCTGCGGCCTaGCTTGACCACCACCTTGAAAGGGCTGTTCTCAAT +
Preference number: 6 (lower is better)
Translates to: QAREPNAHVAAA*LDHHLERAVLN
Trigger: ATTGAGAACAGCCCTTTCAAGGTGGTGGTCAAGTCAGGCCGCAGCTACGTGGGCATTGGGCTCCCGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp CCGGAAGGGCGGTCCATCTGCCCAAAGCCGCTGCCTTaGGCACCAAACTTGCACAGGAAGCTGCCGTTGGAT +
Preference number: 6 (lower is better)
Translates to: PEGRSICPKPLP*APNLHRKLPLD
Trigger: ATCCAACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTGGGCAGATGGACCGCCCTTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp TGCCAAAGTCCACCACAACGATCATTCCGTCGGGGGTaGTGGCGATGCCGGAAGGGCGGTCCATCTGCCCAA +
Preference number: 6 (lower is better)
Translates to: CQSPPQRSFRRG*WRCRKGGPSAQ
Trigger: TTGGGCAGATGGACCGCCCTTCCGGCATCGCCATCACCCCCGACGGAATGATCGTTGTGGTGGACTTTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp ACCTTCGCCTTCATCTCCACCTGTTCCGCCACCGTCTaGGCCTGCTCGATGCTCAGCTGGATTGCCTGTCGT +
Preference number: 6 (lower is better)
Translates to: TFAFISTCSATV*ACSMLSWIACR
Trigger: ACGACAGGCAATCCAGCTGAGCATCGAGCAGGCCCAGACGGTGGCGGAACAGGTGGAGATGAAGGCGAAGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp CACCAAGTGGCCCTCATGGTTGAAGGCCACACCCCGTaGGGAGTCAAAGTGCTTCCAGAGAGCCCCCTCGAA +
Preference number: 6 (lower is better)
Translates to: HQVALMVEGHTP*GVKVLPESPLE
Trigger: TTCGAGGGGGCTCTCTGGAAGCACTTTGACTCCCCACGGGGTGTGGCCTTCAACCATGAGGGCCACTTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp AGGAGCCGGTGGTTGTTGAAGTCAGTGACCACCAAGTaGCCCTCATGGTTGAAGGCCACACCCCGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: RSRWLLKSVTTK*PSWLKATPRGE
Trigger: CTCCCCACGGGGTGTGGCCTTCAACCATGAGGGCCACTTGGTGGTCACTGACTTCAACAACCACCGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp TCCTTGTCTACACTCACACCCCAAGGGCGGCAGAGCTaGCCATCGCTGTCACCCTCACTGCCGAAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: SLSTLTPQGRQS*PSLSPSLPKLR
Trigger: CCTGAGCTTCGGCAGTGAGGGTGACAGCGATGGCAAGCTCTGCCGCCCTTGGGGTGTGAGTGTAGACAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp TCCGAGCCCAGAAAGCGTGCCGACTGGCAGTCGGGGTaGATAACCAGGAGCCGGTGGTTGTTGAAGTCAGTG +
Preference number: 6 (lower is better)
Translates to: SEPRKRADWQSG*ITRSRWLLKSV
Trigger: CACTGACTTCAACAACCACCGGCTCCTGGTTATTCACCCCGACTGCCAGTCGGCACGCTTTCTGGGCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp AGCAGCTCACACTCGCGTTCCTCCAGGGCTTTCTTATaGCTCGCCGTCACGGCTTTGACCTCCGACTGCACA +
Preference number: 6 (lower is better)
Translates to: SSSHSRSSRAFL*LAVTALTSDCT
Trigger: TGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAGGCATAAGAAAGCCCTGGAGGAACGCGAGTGTGAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp GCAGATCTGGAAATCGGTCTCGGGGAACGAAGCCATTaGCAACCCAGCCCGGAGGAGGGAGGAGACCAGAGA +
Preference number: 6 (lower is better)
Translates to: ADLEIGLGERSH*QPSPEEGGDQR
Trigger: TCTCTGGTCTCCTCCCTCCTCCGGGCTGGGTTGCAAATGGCTTCGTTCCCCGAGACCGATTTCCAGATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp CACTCGCGTTCCTCCAGGGCTTTCTTATGCCTCGCCGTCACGGCTTaGACCTCCGACTGCACAACCTTCGCCTTCATCTCCACCTGTTCC +
Preference number: 6 (lower is better)
Translates to: HSRSSRAFLCLAVTA*TSDCTTFAFISTCS
Trigger: GGAACAGGTGGAGATGAAGGCGAAGGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAGGCATAAGAAAGCCCTGGAGGAACGCGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp CCCTCCTCCAGGACCTGCTGCACGGCACTGATGGTGCTCTCAAGCTaGTTGAGGTTTTGCCGCAGCTTCTCCACCTGCAGGTACAGAGAC +
Preference number: 6 (lower is better)
Translates to: PSSRTCCTALMVLSS*LRFCRSFSTCRYRD
Trigger: GTCTCTGTACCTGCAGGTGGAGAAGCTGCGGCAAAACCTCAACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGGTCCTGGAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp AGCCGGTGGTTGTTGAAGTCAGTGACCACCAAGTGGCCCTCATGGTaGAAGGCCACACCCCGTGGGGAGTCAAAGTGCTTCCAGAGAGCC +
Preference number: 6 (lower is better)
Translates to: SRWLLKSVTTKWPSW*KATPRGESKCFQRA
Trigger: GGCTCTCTGGAAGCACTTTGACTCCCCACGGGGTGTGGCCTTCAACCATGAGGGCCACTTGGTGGTCACTGACTTCAACAACCACCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp GATGGCGATGCCGGAAGGGCGGTCCATCTGCCCAAAGCCGCTGCCTaGAGCACCAAACTTGCACAGGAAGCTGCCGTTGGATTCAAACAT +
Preference number: 6 (lower is better)
Translates to: DGDAGRAVHLPKAAA*STKLAQEAAVGFKH
Trigger: ATGTTTGAATCCAACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTGGGCAGATGGACCGCCCTTCCGGCATCGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp CCTCCAGGGCTTTCTTATGCCTCGCCGTCACGGCTTTaGCCTCCGACTGCACAACCTTCGCCTTCATCTCCA +
Preference number: 6 (lower is better)
Translates to: PPGLSYASPSRL*PPTAQPSPSSP
Trigger: TGGAGATGAAGGCGAAGGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAGGCATAAGAAAGCCCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp AGGCCCAAACAGCTGGATCCGGTGGTTCCTCGTGTCTaGGACCAGGATCTTGCCCTCAGAATTCACCGCCAC +
Preference number: 6 (lower is better)
Translates to: RPKQLDPVVPRV*DQDLALRIHRH
Trigger: GTGGCGGTGAATTCTGAGGGCAAGATCCTGGTCTCAGACACGAGGAACCACCGGATCCAGCTGTTTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp TTCTTATGCCTCGCCGTCACGGCTTTGACCTCCGACTaGACAACCTTCGCCTTCATCTCCACCTGTTCCGCC +
Preference number: 6 (lower is better)
Translates to: FLCLAVTALTSD*TTFAFISTCSA
Trigger: GGCGGAACAGGTGGAGATGAAGGCGAAGGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAGGCATAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp AGGATGTCTAGCGCTCTACCCTCCTCCAGGACCTGCTaGACGGCACTGATGGTGCTCTCAAGCTTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: RMSSALPSSRTC*TALMVLSSLLR
Trigger: CCTCAACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGGTCCTGGAGGAGGGTAGAGCGCTAGACATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp AATTTGTGGTGGAAGGCGCCGCAGGGCTTGAACACCTaGATGCGGTTGTTGCTGCGGTCGGCGACAATGATG +
Preference number: 6 (lower is better)
Translates to: NLWWKAPQGLNT*MRLLLRSATMM
Trigger: CATCATTGTCGCCGACCGCAGCAACAACCGCATCCAGGTGTTCAAGCCCTGCGGCGCCTTCCACCACAAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp TCCTCCAGGGCTTTCTTATGCCTCGCCGTCACGGCTTaGACCTCCGACTGCACAACCTTCGCCTTCATCTCC +
Preference number: 6 (lower is better)
Translates to: SSRAFLCLAVTA*TSDCTTFAFIS
Trigger: GGAGATGAAGGCGAAGGTTGTGCAGTCGGAGGTCAAAGCCGTGACGGCGAGGCATAAGAAAGCCCTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp TCCTCCAGGACCTGCTGCACGGCACTGATGGTGCTCTCAAGCTTGTaGAGGTTTTGCCGCAGCTTCTCCACCTGCAGGTACAGAGACTTG +
Preference number: 6 (lower is better)
Translates to: SSRTCCTALMVLSSL*RFCRSFSTCRYRDL
Trigger: CAAGTCTCTGTACCTGCAGGTGGAGAAGCTGCGGCAAAACCTCAACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGGTCCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp CGTGGGGAGTCAAAGTGCTTCCAGAGAGCCCCCTCGAAGCCATACTaGTTTAGGAAGACACCATCAGGCCCAAACAGCTGGATCCGGTGG +
Preference number: 6 (lower is better)
Translates to: RGESKCFQRAPSKPY*FRKTPSGPNSWIRW
Trigger: CCACCGGATCCAGCTGTTTGGGCCTGATGGTGTCTTCCTAAACAAGTATGGCTTCGAGGGGGCTCTCTGGAAGCACTTTGACTCCCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp ACATCTGTACCCGATGGTTCCTGGAATCCGCCACAATaGTGCGCCCTTCCTGGTCCACAGCTACCCCTTGTG +
Preference number: 6 (lower is better)
Translates to: TSVPDGSWNPPQ*CALPGPQLPLV
Trigger: CACAAGGGGTAGCTGTGGACCAGGAAGGGCGCATCATTGTGGCGGATTCCAGGAACCATCGGGTACAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp AGTAGGATGTCTAGCGCTCTACCCTCCTCCAGGACCTaGTGCACGGCACTGATGGTGCTCTCAAGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: SRMSSALPSSRT*CTALMVLSSLL
Trigger: CAACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGGTCCTGGAGGAGGGTAGAGCGCTAGACATCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp CATTCTGCTGATCACTCACCTCTGCACCAAACAGGTTaGCATCAGGGCCCAGGACCACAGCCGACATCAGGT +
Preference number: 6 (lower is better)
Translates to: HSADHSPLHQTG*HQGPGPQPTSG
Trigger: ACCTGATGTCGGCTGTGGTCCTGGGCCCTGATGGCAACCTGTTTGGTGCAGAGGTGAGTGATCAGCAGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp CACCACGTATGTCCCATTCTGCTGATCACTCACCTCTaGACCAAACAGGTTGCCATCAGGGCCCAGGACCAC +
Preference number: 6 (lower is better)
Translates to: HHVCPILLITHL*TKQVAIRAQDH
Trigger: GTGGTCCTGGGCCCTGATGGCAACCTGTTTGGTGCAGAGGTGAGTGATCAGCAGAATGGGACATACGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp GGATCCGGTGGTTCCTCGTGTCTGAGACCAGGATCTTaGCCTCAGAATTCACCGCCACATCCCAAGGGTAGT +
Preference number: 6 (lower is better)
Translates to: GSGGSSCLRPGS*PQNSPPHPKGS
Trigger: ACTACCCTTGGGATGTGGCGGTGAATTCTGAGGGCAAGATCCTGGTCTCAGACACGAGGAACCACCGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp GGCGAGCCGCACATCTCCTTGCACAGCAAGCAGATCTaGAAATCGGTCTCGGGGAACGAAGCCATTTGCAAC +
Preference number: 6 (lower is better)
Translates to: GEPHISLHSKQI*KSVSGNEAICN
Trigger: GTTGCAAATGGCTTCGTTCCCCGAGACCGATTTCCAGATCTGCTTGCTGTGCAAGGAGATGTGCGGCTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp AGGAAGACACCATCAGGCCCAAACAGCTGGATCCGGTaGTTCCTCGTGTCTGAGACCAGGATCTTGCCCTCA +
Preference number: 6 (lower is better)
Translates to: RKTPSGPNSWIR*FLVSETRILPS
Trigger: TGAGGGCAAGATCCTGGTCTCAGACACGAGGAACCACCGGATCCAGCTGTTTGGGCCTGATGGTGTCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp TGGTTGTTGAAGTCAGTGACCACCAAGTGGCCCTCATaGTTGAAGGCCACACCCCGTGGGGAGTCAAAGTGC +
Preference number: 6 (lower is better)
Translates to: WLLKSVTTKWPS*LKATPRGESKC
Trigger: GCACTTTGACTCCCCACGGGGTGTGGCCTTCAACCATGAGGGCCACTTGGTGGTCACTGACTTCAACAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp GACCTGCTGCACGGCACTGATGGTGCTCTCAAGCTTGTTGAGGTTTaGCCGCAGCTTCTCCACCTGCAGGTACAGAGACTTGGCTTTCAC +
Preference number: 6 (lower is better)
Translates to: DLLHGTDGALKLVEV*PQLLHLQVQRLGFH
Trigger: GTGAAAGCCAAGTCTCTGTACCTGCAGGTGGAGAAGCTGCGGCAAAACCTCAACAAGCTTGAGAGCACCATCAGTGCCGTGCAGCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp CCTGACTTGACCACCACCTTGAAAGGGCTGTTCTCAATGTGCTGGTaGCACAGTGTCACAGATACCAGGTGCTCACCCTCCAGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: PDLTTTLKGLFSMCW*HSVTDTRCSPSSWG
Trigger: ACCCCAGCTGGAGGGTGAGCACCTGGTATCTGTGACACTGTGCAACCAGCACATTGAGAACAGCCCTTTCAAGGTGGTGGTCAAGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp AGGAACTGGCCCTCGAACGTGAAGATCTGGATGCGATaGTTGTCCTTGTCAGCCACCACGATCCTGCGTGAG +
Preference number: 6 (lower is better)
Translates to: RNWPSNVKIWMR*LSLSATTILRE
Trigger: CTCACGCAGGATCGTGGTGGCTGACAAGGACAATCATCGCATCCAGATCTTCACGTTCGAGGGCCAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp ACGGCACTGATGGTGCTCTCAAGCTTGTTGAGGTTTTaGCGCAGCTTCTCCACCTGCAGGTACAGAGACTTG +
Preference number: 6 (lower is better)
Translates to: TALMVLSSLLRF*RSFSTCRYRDL
Trigger: CAAGTCTCTGTACCTGCAGGTGGAGAAGCTGCGGCAAAACCTCAACAAGCTTGAGAGCACCATCAGTGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp AGCCGCTGCCTTGAGCACCAAACTTGCACAGGAAGCTaGCGTTGGATTCAAACATCTGTACCCGATGGTTCC +
Preference number: 6 (lower is better)
Translates to: SRCLEHQTCTGS*RWIQTSVPDGS
Trigger: GGAACCATCGGGTACAGATGTTTGAATCCAACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp AGGAAGCTGCCGTTGGATTCAAACATCTGTACCCGATaGTTCCTGGAATCCGCCACAATGATGCGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: RKLPLDSNICTR*FLESATMMRPS
Trigger: GGAAGGGCGCATCATTGTGGCGGATTCCAGGAACCATCGGGTACAGATGTTTGAATCCAACGGCAGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp CACGGCACTGATGGTGCTCTCAAGCTTGTTGAGGTTTaGCCGCAGCTTCTCCACCTGCAGGTACAGAGACTT +
Preference number: 6 (lower is better)
Translates to: HGTDGALKLVEV*PQLLHLQVQRL
Trigger: AAGTCTCTGTACCTGCAGGTGGAGAAGCTGCGGCAAAACCTCAACAAGCTTGAGAGCACCATCAGTGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp CCATCTGCCCAAAGCCGCTGCCTTGAGCACCAAACTTaGACAGGAAGCTGCCGTTGGATTCAAACATCTGTA +
Preference number: 6 (lower is better)
Translates to: PSAQSRCLEHQT*TGSCRWIQTSV
Trigger: TACAGATGTTTGAATCCAACGGCAGCTTCCTGTGCAAGTTTGGTGCTCAAGGCAGCGGCTTTGGGCAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp TTCTCCACCTGCAGGTACAGAGACTTGGCTTTCACCTaGCGGATCTTTTCTACCTTCCACAGCAGCTCACAC +
Preference number: 6 (lower is better)
Translates to: FSTCRYRDLAFT*RIFSTFHSSSH
Trigger: GTGTGAGCTGCTGTGGAAGGTAGAAAAGATCCGCCAGGTGAAAGCCAAGTCTCTGTACCTGCAGGTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp TTTGCCGCAGCTTCTCCACCTGCAGGTACAGAGACTTaGCTTTCACCTGGCGGATCTTTTCTACCTTCCACA +
Preference number: 6 (lower is better)
Translates to: FAAASPPAGTET*LSPGGSFLPST
Trigger: TGTGGAAGGTAGAAAAGATCCGCCAGGTGAAAGCCAAGTCTCTGTACCTGCAGGTGGAGAAGCTGCGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CCA 72 bp TACTTGTTTAGGAAGACACCATCAGGCCCAAACAGCTaGATCCGGTGGTTCCTCGTGTCTGAGACCAGGATC +
Preference number: 6 (lower is better)
Translates to: YLFRKTPSGPNS*IRWFLVSETRI
Trigger: GATCCTGGTCTCAGACACGAGGAACCACCGGATCCAGCTGTTTGGGCCTGATGGTGTCTTCCTAAACAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp TTTTGCCGCAGCTTCTCCACCTGCAGGTACAGAGACTaGGCTTTCACCTGGCGGATCTTTTCTACCTTCCAC +
Preference number: 6 (lower is better)
Translates to: FCRSFSTCRYRD*AFTWRIFSTFH
Trigger: GTGGAAGGTAGAAAAGATCCGCCAGGTGAAAGCCAAGTCTCTGTACCTGCAGGTGGAGAAGCTGCGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp TCAAAGTGCTTCCAGAGAGCCCCCTCGAAGCCATACTaGTTTAGGAAGACACCATCAGGCCCAAACAGCTGG +
Preference number: 6 (lower is better)
Translates to: SKCFQRAPSKPY*FRKTPSGPNSW
Trigger: CCAGCTGTTTGGGCCTGATGGTGTCTTCCTAAACAAGTATGGCTTCGAGGGGGCTCTCTGGAAGCACTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 90 bp TTGTTGAGGTTTTGCCGCAGCTTCTCCACCTGCAGGTACAGAGACTaGGCTTTCACCTGGCGGATCTTTTCTACCTTCCACAGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: LLRFCRSFSTCRYRD*AFTWRIFSTFHSSS
Trigger: TGAGCTGCTGTGGAAGGTAGAAAAGATCCGCCAGGTGAAAGCCAAGTCTCTGTACCTGCAGGTGGAGAAGCTGCGGCAAAACCTCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp GACTTGACCACCACCTTGAAAGGGCTGTTCTCAATGTaGTGGTTGCACAGTGTCACAGATACCAGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: DLTTTLKGLFSM*WLHSVTDTRCS
Trigger: TGAGCACCTGGTATCTGTGACACTGTGCAACCAGCACATTGAGAACAGCCCTTTCAAGGTGGTGGTCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS TCA 72 bp TGCCCTCAGAATTCACCGCCACATCCCAAGGGTAGTTaGACTGCCCATTCTTGGTTCCTTTCTCACCAAACT +
Preference number: 6 (lower is better)
Translates to: CPQNSPPHPKGS*TAHSWFLSHQT
Trigger: AGTTTGGTGAGAAAGGAACCAAGAATGGGCAGTTCAACTACCCTTGGGATGTGGCGGTGAATTCTGAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS CAA 72 bp TTGAACTGCCCATTCTTGGTTCCTTTCTCACCAAACTaGAGGAGGAACTGGCCCTCGAACGTGAAGATCTGG +
Preference number: 6 (lower is better)
Translates to: LNCPFLVPFSPN*RRNWPSNVKIW
Trigger: CCAGATCTTCACGTTCGAGGGCCAGTTCCTCCTCAAGTTTGGTGAGAAAGGAACCAAGAATGGGCAGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6
CDS GCA 72 bp CTAGGAAATGCAATTAGAAGACGAGGATTCGATTGTTaGCAAAGTCCACCACAACGATCATTCCGTCGGGGG +
Preference number: 6 (lower is better)
Translates to: LGNAIRRRGFDC*QSPPQRSFRRG
Trigger: CCCCCGACGGAATGATCGTTGTGGTGGACTTTGGCAACAATCGAATCCTCGTCTTCTAATTGCATTTCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383763.6