Pregenerated sensors for TRIM69 (Homo sapiens)
Ensembl gene IDs: ENSG00000185880Ensembl transcript IDs: ENST00000329464.9, ENST00000338264.8, ENST00000558173.5, ENST00000558329.5, ENST00000559315.1, ENST00000559390.5, ENST00000560141.2, ENST00000560442.5, ENST00000560554.1, ENST00000561043.5, ENST00000561170.1, ENST00000561237.1, ENST00000618398.2, ENST00000621836.3, ENST00000631458.1, ENST00000631740.1, ENST00000631767.1, ENST00000632277.1, ENST00000632766.1, ENST00000633106.1, ENST00000633414.1, ENST00000633489.1, ENST00000633859.1, ENST00000634142.1
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCGGACAGAGACCTGAGCAAGCCGAACCCGGGTGCCTGGCTGCACTaGGCTGGGAAGGAGGACCGGGCGGCCGCAGGCCAGGGAGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: PDRDLSKPNPGAWLH*AGKEDRAAAGQGGQ Trigger: TTGCCCTCCCTGGCCTGCGGCCGCCCGGTCCTCCTTCCCAGCCCAGTGCAGCCAGGCACCCGGGTTCGGCTTGCTCAGGTCTCTGTCCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000561237.1 ENST00000632277.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS CCA 90 bp | TTCCCAGTCCCGGACAGAGACCTGAGCAAGCCGAACCCGGGTGCCTaGCTGCACTGGGCTGGGAAGGAGGACCGGGCGGCCGCAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: FPVPDRDLSKPNPGA*LHWAGKEDRAAAGQ Trigger: CTGGCCTGCGGCCGCCCGGTCCTCCTTCCCAGCCCAGTGCAGCCAGGCACCCGGGTTCGGCTTGCTCAGGTCTCTGTCCGGGACTGGGAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000561237.1 ENST00000632277.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS TCA 90 bp | CCACTTTCCCGGCCCTCCGTGGCTTCCCAGTCCCGGACAGAGACCTaGGCAAGCCGAACCCGGGTGCCTGGCTGCACTGGGCTGGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: PLSRPSVASQSRTET*ASRTRVPGCTGLGR Trigger: CCTTCCCAGCCCAGTGCAGCCAGGCACCCGGGTTCGGCTTGCTCAGGTCTCTGTCCGGGACTGGGAAGCCACGGAGGGCCGGGAAAGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000561237.1 ENST00000632277.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS CCA 90 bp | GGGGGAGGCAGAGGAGAAGGTACTCGACGATGGACGCGCCCAGGCTaGGGGCGGCGCCCACAGAGCAGAGCCAAGGTCACGAAGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: GGGRGEGTRRWTRPG*GRRPQSRAKVTKQS Trigger: GCTCTGCTTCGTGACCTTGGCTCTGCTCTGTGGGCGCCGCCCCCAGCCTGGGCGCGTCCATCGTCGAGTACCTTCTCCTCTGCCTCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000559390.5 ENST00000560141.2 ENST00000633414.1 ENST00000634142.1 |
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| CDS CCA 90 bp | GGGCTGGGAAGGAGGACCGGGCGGCCGCAGGCCAGGGAGGGCAATTaGAGAGAGATAGAAGCAGAGGGAGGGGGAGGCAGAGGAGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: GLGRRTGRPQAREGN*REIEAEGGGGRGEG Trigger: ACCTTCTCCTCTGCCTCCCCCTCCCTCTGCTTCTATCTCTCTCCAATTGCCCTCCCTGGCCTGCGGCCGCCCGGTCCTCCTTCCCAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS GCA 90 bp | CTCCCCGGATCGCTATTCTCGACTATTTGCGTTTCGCGACCGGCCTaGCCCTCCTCTTTCCCGCTCTGCCCAGGAAAAGCGAGCCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: LPGSLFSTICVSRPA*PSSFPLCPGKASPR Trigger: CCGAGGGCTCGCTTTTCCTGGGCAGAGCGGGAAAGAGGAGGGGCAGGCCGGTCGCGAAACGCAAATAGTCGAGAATAGCGATCCGGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS CCA 90 bp | CTCTTTCCCGCTCTGCCCAGGAAAAGCGAGCCCTCGGAAGGAACCTaGGCAGCCCCAGAAAGCAGTGCCCATCACTTTCCAGCTCCATCC | + |
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Preference number: 5 (lower is better) Translates to: LFPALPRKSEPSEGT*AAPESSAHHFPAPS Trigger: GGATGGAGCTGGAAAGTGATGGGCACTGCTTTCTGGGGCTGCCCAGGTTCCTTCCGAGGGCTCGCTTTTCCTGGGCAGAGCGGGAAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS TCA 90 bp | CCATGCCAGACGCTGGTTTGGCTTTTGGAGAGCACCAGATTTGGGTaGGCTGTTTTAGGGTCCAGAGTTAGTGGAGACAGGCCTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PCQTLVWLLESTRFG*AVLGSRVSGDRPGQ Trigger: CTGCCCAGGCCTGTCTCCACTAACTCTGGACCCTAAAACAGCTCACCCAAATCTGGTGCTCTCCAAAAGCCAAACCAGCGTCTGGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000561043.5 ENST00000561170.1 ENST00000618398.2 ENST00000621836.3 ENST00000631458.1 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 ENST00000633859.1 |
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| CDS TCA 90 bp | TATGCTGTCTGTTCCACCCAGTCCTGCCCGGTAGTTATTCAGCGATaGGAGAGTAGGAAGCTTGAGCTCCAGGAGTGTGCCACTTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: YAVCSTQSCPVVIQR*ESRKLELQECATFP Trigger: CGGGAAAGTGGCACACTCCTGGAGCTCAAGCTTCCTACTCTCTCATCGCTGAATAACTACCGGGCAGGACTGGGTGGAACAGACAGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000561237.1 ENST00000632277.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS TCA 90 bp | CAGTGCCCATCACTTTCCAGCTCCATCCACCCAGCAGCCCATCAATaGCCTAAATATGCTGTCTGTTCCACCCAGTCCTGCCCGGTAGTT | + |
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Preference number: 5 (lower is better) Translates to: QCPSLSSSIHPAAHQ*PKYAVCSTQSCPVV Trigger: AACTACCGGGCAGGACTGGGTGGAACAGACAGCATATTTAGGTCATTGATGGGCTGCTGGGTGGATGGAGCTGGAAAGTGATGGGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS GCA 90 bp | CTAAGGATGCTCGAGATGGTACTTCTCTTGGGCCCCACAGACACCTaGTTCTCCCCGGATCGCTATTCTCGACTATTTGCGTTTCGCGAC | + |
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Preference number: 5 (lower is better) Translates to: LRMLEMVLLLGPTDT*FSPDRYSRLFAFRD Trigger: GTCGCGAAACGCAAATAGTCGAGAATAGCGATCCGGGGAGAAGCAGGTGTCTGTGGGGCCCAAGAGAAGTACCATCTCGAGCATCCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000559390.5 ENST00000560554.1 ENST00000633414.1 ENST00000633489.1 |
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| CDS GCA 90 bp | CTCTGTCCCTTTTCACTCCCTCCTCATCATTGTTCACCACACAACTaGCAGTGTGGTCTTGGAGTGGCCTTGTGTTTGCTCTTGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LCPFSLPPHHCSPHN*QCGLGVALCLLLAS Trigger: GGAGGCCAAGAGCAAACACAAGGCCACTCCAAGACCACACTGGCAGTTGTGTGGTGAACAATGATGAGGAGGGAGTGAAAAGGGACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 90 bp | AAAATTAGCTGGTCATGGCGGCAGGCACTGGTAATCCCTGCTACTTaGGAGGTTGAGACAGGAGAATTGCTTGACCTGGGAGGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: KISWSWRQALVIPAT*EVETGELLDLGGGG Trigger: ACCTCCACCTCCCAGGTCAAGCAATTCTCCTGTCTCAACCTCCCAAGTAGCAGGGATTACCAGTGCCTGCCGCCATGACCAGCTAATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS GCA 90 bp | TGGATGGCAAGCTCCTCCGTGAAGAAATGGACAGCATCAGAGATTTaGAGGAACTCCTTAGACTGCCCCACAGACAACCGAGCATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: WMASSSVKKWTASEI*RNSLDCPTDNRASL Trigger: CAAGGATGCTCGGTTGTCTGTGGGGCAGTCTAAGGAGTTCCTGCAAATCTCTGATGCTGTCCATTTCTTCACGGAGGAGCTTGCCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS GCA 90 bp | ATCATCATTTGCGAGATGGTACTTCTCTTGGGCCCCACAGACACCTaGTTCTCCCCGGATCGCTATTCTCGACTATTTGCGTTTCGCGAC | + |
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Preference number: 5 (lower is better) Translates to: IIICEMVLLLGPTDT*FSPDRYSRLFAFRD Trigger: GTCGCGAAACGCAAATAGTCGAGAATAGCGATCCGGGGAGAAGCAGGTGTCTGTGGGGCCCAAGAGAAGTACCATCTCGCAAATGATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000559315.1 ENST00000632766.1 |
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| CDS CCA 90 bp | GCTTGCAGCCTCCAAAAGTCTTGGATACAGGCTTCACAGAAGTTGTaGCCACAGCTTAGCATCAGTGGGTCTCGGAACCAATCATTGCAC | + |
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Preference number: 5 (lower is better) Translates to: ACSLQKSWIQASQKL*PQLSISGSRNQSLH Trigger: GTGCAATGATTGGTTCCGAGACCCACTGATGCTAAGCTGTGGCCACAACTTCTGTGAAGCCTGTATCCAAGACTTTTGGAGGCTGCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CCA 90 bp | AGGCCTGGGCAGAGAGTGTCCTGCATTTCCCTCCATACCATGTACTaGATAGGACCTTTGTACTGGCCCAGGTTCAGCTTTCTGGAAATA | + |
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Preference number: 5 (lower is better) Translates to: RPGQRVSCISLHTMY*IGPLYWPRFSFLEI Trigger: TATTTCCAGAAAGCTGAACCTGGGCCAGTACAAAGGTCCTATCCAGTACATGGTATGGAGGGAAATGCAGGACACTCTCTGCCCAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000561043.5 ENST00000561170.1 ENST00000618398.2 ENST00000621836.3 ENST00000631458.1 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 ENST00000633859.1 |
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| CDS CCA 90 bp | CTTTTCACTCCCTCCTCATCATTGTTCACCACACAACTGCCAGTGTaGTCTTGGAGTGGCCTTGTGTTTGCTCTTGGCCTCCTCCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LFTPSSSLFTTQLPV*SWSGLVFALGLLLC Trigger: ACAAAGGAGGAGGCCAAGAGCAAACACAAGGCCACTCCAAGACCACACTGGCAGTTGTGTGGTGAACAATGATGAGGAGGGAGTGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS GCA 90 bp | GTTCACCACACAACTGCCAGTGTGGTCTTGGAGTGGCCTTGTGTTTaGTCTTGGCCTCCTCCTTTGTTCAATAATCACTACAGAGTCACG | + |
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Preference number: 5 (lower is better) Translates to: VHHTTASVVLEWPCV*SWPPPLFNNHYRVT Trigger: CGTGACTCTGTAGTGATTATTGAACAAAGGAGGAGGCCAAGAGCAAACACAAGGCCACTCCAAGACCACACTGGCAGTTGTGTGGTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 90 bp | TCCTGCATTTCCCTCCATACCATGTACTGGATAGGACCTTTGTACTaGCCCAGGTTCAGCTTTCTGGAAATAAGCTCTCTGGTTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SCISLHTMYWIGPLY*PRFSFLEISSLVAS Trigger: GCTGGCAACCAGAGAGCTTATTTCCAGAAAGCTGAACCTGGGCCAGTACAAAGGTCCTATCCAGTACATGGTATGGAGGGAAATGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000561043.5 ENST00000561170.1 ENST00000618398.2 ENST00000621836.3 ENST00000631458.1 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 ENST00000633859.1 |
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| CDS CCA 90 bp | CACACAACTGCCAGTGTGGTCTTGGAGTGGCCTTGTGTTTGCTCTTaGCCTCCTCCTTTGTTCAATAATCACTACAGAGTCACGGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: HTTASVVLEWPCVCS*PPPLFNNHYRVTVS Trigger: ACTCACCGTGACTCTGTAGTGATTATTGAACAAAGGAGGAGGCCAAGAGCAAACACAAGGCCACTCCAAGACCACACTGGCAGTTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 90 bp | ACTCCCTCCTCATCATTGTTCACCACACAACTGCCAGTGTGGTCTTaGAGTGGCCTTGTGTTTGCTCTTGGCCTCCTCCTTTGTTCAATA | + |
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Preference number: 5 (lower is better) Translates to: TPSSSLFTTQLPVWS*SGLVFALGLLLCSI Trigger: TATTGAACAAAGGAGGAGGCCAAGAGCAAACACAAGGCCACTCCAAGACCACACTGGCAGTTGTGTGGTGAACAATGATGAGGAGGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS TCA 90 bp | GAGCATCCTTGCATTGAAAGCAGATCAGTTTCCCATCTGGTTTACTaGACAGTTTCAGGTTCTCTCCATGCTCTGGGCACTGTGGATGGC | + |
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Preference number: 5 (lower is better) Translates to: EHPCIESRSVSHLVY*TVSGSLHALGTVDG Trigger: GCCATCCACAGTGCCCAGAGCATGGAGAGAACCTGAAACTGTTCAGTAAACCAGATGGGAAACTGATCTGCTTTCAATGCAAGGATGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CCA 90 bp | TCCATGATTATCACCATGGTTATTGCAGAGACTAGTGCTTGGGGATaGGGGCCCACACCACCAACACTCACACACTTGGTAAATACCATC | + |
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Preference number: 5 (lower is better) Translates to: SMIITMVIAETSAWG*GPTPPTLTHLVNTI Trigger: GATGGTATTTACCAAGTGTGTGAGTGTTGGTGGTGTGGGCCCCCATCCCCAAGCACTAGTCTCTGCAATAACCATGGTGATAATCATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CCA 90 bp | GAAACCTCCATGATTATCACCATGGTTATTGCAGAGACTAGTGCTTaGGGATGGGGGCCCACACCACCAACACTCACACACTTGGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: ETSMIITMVIAETSA*GWGPTPPTLTHLVN Trigger: ATTTACCAAGTGTGTGAGTGTTGGTGGTGTGGGCCCCCATCCCCAAGCACTAGTCTCTGCAATAACCATGGTGATAATCATGGAGGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS TCA 90 bp | AGGAACTCCTTAGACTGCCCCACAGACAACCGAGCATCCTTGCATTaGAAGCAGATCAGTTTCCCATCTGGTTTACTGAACAGTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: RNSLDCPTDNRASLH*KQISFPSGLLNSFR Trigger: CCTGAAACTGTTCAGTAAACCAGATGGGAAACTGATCTGCTTTCAATGCAAGGATGCTCGGTTGTCTGTGGGGCAGTCTAAGGAGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS TCA 90 bp | GCTCTTGGCCTCCTCCTTTGTTCAATAATCACTACAGAGTCACGGTaGGTTAGGTCAATCACTACAGGTGCTAGAGATTCACAGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: ALGLLLCSIITTESR*VRSITTGARDSQVR Trigger: CCTCACCTGTGAATCTCTAGCACCTGTAGTGATTGACCTAACTCACCGTGACTCTGTAGTGATTATTGAACAAAGGAGGAGGCCAAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS GCA 90 bp | CAAGGCTATGTTAGGTGTTGGGCCTCCTTCTCTGGCTATAGGGAATaGTCAGGCTTGTCTGGAATTCACCATGCTGTCTCAGCTTATTAT | + |
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Preference number: 5 (lower is better) Translates to: QGYVRCWASFSGYRE*SGLSGIHHAVSAYY Trigger: ATAATAAGCTGAGACAGCATGGTGAATTCCAGACAAGCCTGAGCATTCCCTATAGCCAGAGAAGGAGGCCCAACACCTAACATAGCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 90 bp | CCTGTTCAGGACAGGAAGGAACAAGGGTGCTTAGCCTCTATAAACTaGCCAGAACCAGCCCATAGTCAGTGGTCTTCTTATCAAGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PVQDRKEQGCLASIN*PEPAHSQWSSYQEK Trigger: TTTCTCTTGATAAGAAGACCACTGACTATGGGCTGGTTCTGGCCAGTTTATAGAGGCTAAGCACCCTTGTTCCTTCCTGTCCTGAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560141.2 |
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| CDS GCA 90 bp | ATCAGTTTCCCATCTGGTTTACTGAACAGTTTCAGGTTCTCTCCATaGTCTGGGCACTGTGGATGGCCCTTGAGTAAGGGTAACTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: ISFPSGLLNSFRFSP*SGHCGWPLSKGNFL Trigger: TAAGAAGTTACCCTTACTCAAGGGCCATCCACAGTGCCCAGAGCATGGAGAGAACCTGAAACTGTTCAGTAAACCAGATGGGAAACTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CCA 90 bp | AGTTCTGTTGTTCCGTCTTTGCCTGAATGCTCACCAACATATCCTTaGCTAAGAGACATTGCTCCTGAAGCTGGCTCAGATTCAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: SSVVPSLPECSPTYP*LRDIAPEAGSDSTP Trigger: TGGAGTTGAATCTGAGCCAGCTTCAGGAGCAATGTCTCTTAGCCAAGGATATGTTGGTGAGCATTCAGGCAAAGACGGAACAACAGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000559390.5 ENST00000560442.5 ENST00000618398.2 ENST00000621836.3 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 |
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| CDS TCA 90 bp | TCCCGGAGCTCAGTTAAAATGTCCTTTTCTTTGCTGTGCAGGAACTaGTGCAGCTTTAGAAACTCCATGGACACATGTTGCTGCAGATGT | + |
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Preference number: 5 (lower is better) Translates to: SRSSVKMSFSLLCRN*CSFRNSMDTCCCRC Trigger: ACATCTGCAGCAACATGTGTCCATGGAGTTTCTAAAGCTGCATCAGTTCCTGCACAGCAAAGAAAAGGACATTTTAACTGAGCTCCGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000618398.2 ENST00000621836.3 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 |
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| CDS TCA 90 bp | CCAAAGACCAGACACATTTCAACGCCACGACAGTCACCTGGTGACTaGACTATCGAAAAGATCAGCATATTAGGGGAAAGGTTAATCTGC | + |
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Preference number: 5 (lower is better) Translates to: PKTRHISTPRQSPGD*TIEKISILGERLIC Trigger: GCAGATTAACCTTTCCCCTAATATGCTGATCTTTTCGATAGTTCAGTCACCAGGTGACTGTCGTGGCGTTGAAATGTGTCTGGTCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CCA 90 bp | TTACTGAACAGTTTCAGGTTCTCTCCATGCTCTGGGCACTGTGGATaGCCCTTGAGTAAGGGTAACTTCTTAATCTTCTCTACCAACTTG | + |
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Preference number: 5 (lower is better) Translates to: LLNSFRFSPCSGHCG*PLSKGNFLIFSTNL Trigger: CAAGTTGGTAGAGAAGATTAAGAAGTTACCCTTACTCAAGGGCCATCCACAGTGCCCAGAGCATGGAGAGAACCTGAAACTGTTCAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CCA 90 bp | CCTTTTCTTTGCTGTGCAGGAACTGATGCAGCTTTAGAAACTCCATaGACACATGTTGCTGCAGATGTAGCTTGTTTTCCTTGTGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: PFLCCAGTDAALETP*THVAADVACFPCEQ Trigger: CTGCTCACAAGGAAAACAAGCTACATCTGCAGCAACATGTGTCCATGGAGTTTCTAAAGCTGCATCAGTTCCTGCACAGCAAAGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000559390.5 ENST00000618398.2 ENST00000621836.3 ENST00000633414.1 |
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| CDS CCA 90 bp | TCAGAGCATTGGATGCCAACAACCCATAGTTCCTGCACAAAGACATaGAAAAATCCAGCCACAGGATCTGTCTTGAGCAATAAGGCATAC | + |
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Preference number: 5 (lower is better) Translates to: SEHWMPTTHSSCTKT*KNPATGSVLSNKAY Trigger: GTATGCCTTATTGCTCAAGACAGATCCTGTGGCTGGATTTTTCCATGTCTTTGTGCAGGAACTATGGGTTGTTGGCATCCAATGCTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 90 bp | CCTTTTCTTTGCTGTGCAGGAACTGATGCAGCTTTAGAAACTCCATaGACACATGTTGCTGCAGATGTAGCTTGTTTTCCTGGAAACCTC | + |
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Preference number: 5 (lower is better) Translates to: PFLCCAGTDAALETP*THVAADVACFPGNL Trigger: GAGGTTTCCAGGAAAACAAGCTACATCTGCAGCAACATGTGTCCATGGAGTTTCTAAAGCTGCATCAGTTCCTGCACAGCAAAGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS GCA 90 bp | GTATTTTTAAGCTCAGAGCATTGGATGCCAACAACCCATAGTTCCTaGACAAAGACATGGAAAAATCCAGCCACAGGATCTGTCTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: VFLSSEHWMPTTHSS*TKTWKNPATGSVLS Trigger: GCTCAAGACAGATCCTGTGGCTGGATTTTTCCATGTCTTTGTGCAGGAACTATGGGTTGTTGGCATCCAATGCTCTGAGCTTAAAAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 90 bp | CCTTTTCTTTGCTGTGCAGGAACTGATGCAGCTTTAGAAACTCCATaGACACATGTTGCTGCAGATGTAGCTTGTTTTCCTGGAAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFLCCAGTDAALETP*THVAADVACFPGNL Trigger: AAGGTTTCCAGGAAAACAAGCTACATCTGCAGCAACATGTGTCCATGGAGTTTCTAAAGCTGCATCAGTTCCTGCACAGCAAAGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000558329.5 ENST00000560442.5 ENST00000631740.1 ENST00000633106.1 |
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| CDS TCA 90 bp | AAAGCCAAAGACCAGACACATTTCAACGCCACGACAGTCACCTGGTaGCTGAACTATCGAAAAGATCAGCATATTAGGGGAAAGGTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: KAKDQTHFNATTVTW*LNYRKDQHIRGKVN Trigger: ATTAACCTTTCCCCTAATATGCTGATCTTTTCGATAGTTCAGTCACCAGGTGACTGTCGTGGCGTTGAAATGTGTCTGGTCTTTGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS TCA 90 bp | TCTACCAACTTGTCCAGTACAGGGTTGAATGTACAGTTGTTATACTaGCATAGCATCTTACACTCAGGACAGAATGTTTCCTTTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: STNLSSTGLNVQLLY*HSILHSGQNVSFAC Trigger: GCAAGCAAAGGAAACATTCTGTCCTGAGTGTAAGATGCTATGTCAGTATAACAACTGTACATTCAACCCTGTACTGGACAAGTTGGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS TCA 90 bp | GTTCCTGCACAAAGACATGGAAAAATCCAGCCACAGGATCTGTCTTaGGCAATAAGGCATACATCATATATAACTGCAGTGATACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VPAQRHGKIQPQDLS*AIRHTSYITAVILM Trigger: CATCAGTATCACTGCAGTTATATATGATGTATGCCTTATTGCTCAAGACAGATCCTGTGGCTGGATTTTTCCATGTCTTTGTGCAGGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS TCA 90 bp | TCTCAGTTCCTCATTCTCCTCATTTCTAGTGATTTCCACATTTATTaGTTCATTCCTATAGTCTCACCTAGGATTTTATCACCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQFLILLISSDFHIY*FIPIVSPRILSPPA Trigger: TGCTGGGGGTGATAAAATCCTAGGTGAGACTATAGGAATGAATCAATAAATGTGGAAATCACTAGAAATGAGGAGAATGAGGAACTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS GCA 90 bp | TCCAAAATAACTTTTTATGCACCAGGCTCACTCAGATACTCCTATTaGAACAATTATTGGATCTCATTGAAACCTCCTATTCACCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: SKITFYAPGSLRYSY*NNYWISLKPPIHRS Trigger: GGATCGGTGAATAGGAGGTTTCAATGAGATCCAATAATTGTTGCAATAGGAGTATCTGAGTGAGCCTGGTGCATAAAAAGTTATTTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CCA 72 bp | CCGGACAGAGACCTGAGCAAGCCGAACCCGGGTGCCTaGCTGCACTGGGCTGGGAAGGAGGACCGGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PDRDLSKPNPGA*LHWAGKEDRAA Trigger: GGCCGCCCGGTCCTCCTTCCCAGCCCAGTGCAGCCAGGCACCCGGGTTCGGCTTGCTCAGGTCTCTGTCCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000561237.1 ENST00000632277.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS TCA 72 bp | CGGCCCTCCGTGGCTTCCCAGTCCCGGACAGAGACCTaGGCAAGCCGAACCCGGGTGCCTGGCTGCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPSVASQSRTET*ASRTRVPGCTG Trigger: CCCAGTGCAGCCAGGCACCCGGGTTCGGCTTGCTCAGGTCTCTGTCCGGGACTGGGAAGCCACGGAGGGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000561237.1 ENST00000632277.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS CCA 72 bp | AGAGGAGAAGGTACTCGACGATGGACGCGCCCAGGCTaGGGGCGGCGCCCACAGAGCAGAGCCAAGGTCACG | + |
|
Preference number: 6 (lower is better) Translates to: RGEGTRRWTRPG*GRRPQSRAKVT Trigger: CGTGACCTTGGCTCTGCTCTGTGGGCGCCGCCCCCAGCCTGGGCGCGTCCATCGTCGAGTACCTTCTCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000559390.5 ENST00000560141.2 ENST00000633414.1 ENST00000634142.1 |
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| CDS CAA 90 bp | TGGGCTGGGAAGGAGGACCGGGCGGCCGCAGGCCAGGGAGGGCAATaGGAGAGAGATAGAAGCAGAGGGAGGGGGAGGCAGAGGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WAGKEDRAAAGQGGQ*ERDRSRGRGRQRRR Trigger: CCTTCTCCTCTGCCTCCCCCTCCCTCTGCTTCTATCTCTCTCCAATTGCCCTCCCTGGCCTGCGGCCGCCCGGTCCTCCTTCCCAGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS GCA 72 bp | GTTTCGCGACCGGCCTGCCCCTCCTCTTTCCCGCTCTaGCCAGGAAAAGCGAGCCCTCGGAAGGAACCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSRPACPSSFPL*PGKASPRKEPG Trigger: CCCAGGTTCCTTCCGAGGGCTCGCTTTTCCTGGGCAGAGCGGGAAAGAGGAGGGGCAGGCCGGTCGCGAAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS GCA 72 bp | GCCCTCGGAAGGAACCTGGGCAGCCCCAGAAAGCAGTaGCCATCACTTTCCAGCTCCATCCACCCAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALGRNLGSPRKQ*PSLSSSIHPAA Trigger: GGCTGCTGGGTGGATGGAGCTGGAAAGTGATGGGCACTGCTTTCTGGGGCTGCCCAGGTTCCTTCCGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS GCA 72 bp | CACCTGCTTCTCCCCGGATCGCTATTCTCGACTATTTaGGTTTCGCGACCGGCCTGCCCCTCCTCTTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: HLLLPGSLFSTI*VSRPACPSSFP Trigger: CGGGAAAGAGGAGGGGCAGGCCGGTCGCGAAACGCAAATAGTCGAGAATAGCGATCCGGGGAGAAGCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS GCA 72 bp | TCGCTATTCTCGACTATTTGCGTTTCGCGACCGGCCTaGCCCTCCTCTTTCCCGCTCTGCCCAGGAAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SLFSTICVSRPA*PSSFPLCPGKA Trigger: CGCTTTTCCTGGGCAGAGCGGGAAAGAGGAGGGGCAGGCCGGTCGCGAAACGCAAATAGTCGAGAATAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS CAA 72 bp | ACACCTGCTTCTCCCCGGATCGCTATTCTCGACTATTaGCGTTTCGCGACCGGCCTGCCCCTCCTCTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TPASPRIAILDY*RFATGLPLLFP Trigger: GGGAAAGAGGAGGGGCAGGCCGGTCGCGAAACGCAAATAGTCGAGAATAGCGATCCGGGGAGAAGCAGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS TCA 72 bp | TGTTCCACCCAGTCCTGCCCGGTAGTTATTCAGCGATaGGAGAGTAGGAAGCTTGAGCTCCAGGAGTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSTQSCPVVIQR*ESRKLELQECA Trigger: GGCACACTCCTGGAGCTCAAGCTTCCTACTCTCTCATCGCTGAATAACTACCGGGCAGGACTGGGTGGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000561237.1 ENST00000632277.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS GCA 72 bp | CTCGAGATGGTACTTCTCTTGGGCCCCACAGACACCTaGTTCTCCCCGGATCGCTATTCTCGACTATTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LEMVLLLGPTDT*FSPDRYSRLFA Trigger: CGCAAATAGTCGAGAATAGCGATCCGGGGAGAAGCAGGTGTCTGTGGGGCCCAAGAGAAGTACCATCTCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000559390.5 ENST00000560554.1 ENST00000633414.1 ENST00000633489.1 |
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| CDS GCA 72 bp | TGCGAGATGGTACTTCTCTTGGGCCCCACAGACACCTaGTTCTCCCCGGATCGCTATTCTCGACTATTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: CEMVLLLGPTDT*FSPDRYSRLFA Trigger: CGCAAATAGTCGAGAATAGCGATCCGGGGAGAAGCAGGTGTCTGTGGGGCCCAAGAGAAGTACCATCTCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000559315.1 ENST00000632766.1 |
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| CDS GCA 72 bp | AACGAGATGGTACTTCTCTTGGGCCCCACAGACACCTaGTTCTCCCCGGATCGCTATTCTCGACTATTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: NEMVLLLGPTDT*FSPDRYSRLFA Trigger: CGCAAATAGTCGAGAATAGCGATCCGGGGAGAAGCAGGTGTCTGTGGGGCCCAAGAGAAGTACCATCTCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 72 bp | CCCTCCTCATCATTGTTCACCACACAACTGCCAGTGTaGTCTTGGAGTGGCCTTGTGTTTGCTCTTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PSSSLFTTQLPV*SWSGLVFALGL Trigger: GAGGCCAAGAGCAAACACAAGGCCACTCCAAGACCACACTGGCAGTTGTGTGGTGAACAATGATGAGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CAA 72 bp | CCTCAGGGTCTGAAGCTCCTTCAGAGTTGTCTCCAGTaGACCCTGTTGGATGGCAAGCTCCTCCGTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PQGLKLLQSCLQ*TLLDGKLLREE Trigger: TTCTTCACGGAGGAGCTTGCCATCCAACAGGGTCAACTGGAGACAACTCTGAAGGAGCTTCAGACCCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CAA 72 bp | CCTCAGGGTCTGAAGCTCCTTCAGAGTTGTCTCCAGTaGACCCTGTTGGATGGCAAGCTCCTCCTCCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: PQGLKLLQSCLQ*TLLDGKLLLHE Trigger: TTCATGGAGGAGGAGCTTGCCATCCAACAGGGTCAACTGGAGACAACTCTGAAGGAGCTTCAGACCCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000338264.8 ENST00000558329.5 ENST00000560442.5 ENST00000561043.5 ENST00000618398.2 ENST00000631740.1 ENST00000633106.1 ENST00000633859.1 |
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| CDS CAA 90 bp | CTGCATGTTCCTCAGGGTCTGAAGCTCCTTCAGAGTTGTCTCCAGTaGACCCTGTTGGATGGCAAGCTCCTCCGTGAAGAAATGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LHVPQGLKLLQSCLQ*TLLDGKLLREEMDS Trigger: GCTGTCCATTTCTTCACGGAGGAGCTTGCCATCCAACAGGGTCAACTGGAGACAACTCTGAAGGAGCTTCAGACCCTGAGGAACATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS TCA 72 bp | TCACTTTCCAGCTCCATCCACCCAGCAGCCCATCAATaGCCTAAATATGCTGTCTGTTCCACCCAGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSSSIHPAAHQ*PKYAVCSTQSC Trigger: GCAGGACTGGGTGGAACAGACAGCATATTTAGGTCATTGATGGGCTGCTGGGTGGATGGAGCTGGAAAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000559315.1 ENST00000559390.5 ENST00000560141.2 ENST00000560554.1 ENST00000632766.1 ENST00000633414.1 ENST00000633489.1 ENST00000634142.1 |
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| CDS CCA 72 bp | ATCACCATGGTTATTGCAGAGACTAGTGCTTGGGGATaGGGGCCCACACCACCAACACTCACACACTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ITMVIAETSAWG*GPTPPTLTHLV Trigger: TACCAAGTGTGTGAGTGTTGGTGGTGTGGGCCCCCATCCCCAAGCACTAGTCTCTGCAATAACCATGGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CAA 72 bp | TCTGCATGTTCCTCAGGGTCTGAAGCTCCTTCAGAGTaGTCTCCAGTTGACCCTGTTGGATGGCAAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SACSSGSEAPSE*SPVDPVGWQAP Trigger: AGGAGCTTGCCATCCAACAGGGTCAACTGGAGACAACTCTGAAGGAGCTTCAGACCCTGAGGAACATGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000561043.5 ENST00000618398.2 ENST00000621836.3 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 ENST00000633859.1 |
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| CDS CAA 90 bp | TTGGATGGCAAGCTCCTCCGTGAAGAAATGGACAGCATCAGAGATTaGCAGGAACTCCTTAGACTGCCCCACAGACAACCGAGCATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LDGKLLREEMDSIRD*QELLRLPHRQPSIL Trigger: AAGGATGCTCGGTTGTCTGTGGGGCAGTCTAAGGAGTTCCTGCAAATCTCTGATGCTGTCCATTTCTTCACGGAGGAGCTTGCCATCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CAA 90 bp | CAGGCACTGGTAATCCCTGCTACTTGGGAGGTTGAGACAGGAGAATaGCTTGACCTGGGAGGTGGAGGTTATAGTAAGCTGAGATCACTC | + |
|
Preference number: 6 (lower is better) Translates to: QALVIPATWEVETGE*LDLGGGGYSKLRSL Trigger: GAGTGATCTCAGCTTACTATAACCTCCACCTCCCAGGTCAAGCAATTCTCCTGTCTCAACCTCCCAAGTAGCAGGGATTACCAGTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS TCA 72 bp | ACGCTGGTTTGGCTTTTGGAGAGCACCAGATTTGGGTaGGCTGTTTTAGGGTCCAGAGTTAGTGGAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: TLVWLLESTRFG*AVLGSRVSGDR Trigger: CCTGTCTCCACTAACTCTGGACCCTAAAACAGCTCACCCAAATCTGGTGCTCTCCAAAAGCCAAACCAGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000561043.5 ENST00000561170.1 ENST00000618398.2 ENST00000621836.3 ENST00000631458.1 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 ENST00000633859.1 |
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| CDS TCA 72 bp | AATTGCTTGACCTGGGAGGTGGAGGTTATAGTAAGCTaGGATCACTCCACTGCACCCCAGCTTGGGCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: NCLTWEVEVIVS*DHSTAPQLGQQ Trigger: TTGTTGCCCAAGCTGGGGTGCAGTGGAGTGATCTCAGCTTACTATAACCTCCACCTCCCAGGTCAAGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS GCA 72 bp | CCATCTGGTTTACTGAACAGTTTCAGGTTCTCTCCATaGTCTGGGCACTGTGGATGGCCCTTGAGTAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSGLLNSFRFSP*SGHCGWPLSKG Trigger: ACCCTTACTCAAGGGCCATCCACAGTGCCCAGAGCATGGAGAGAACCTGAAACTGTTCAGTAAACCAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS GCA 72 bp | AGCTCCTCCGTGAAGAAATGGACAGCATCAGAGATTTaGAGGAACTCCTTAGACTGCCCCACAGACAACCGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSVKKWTASEI*RNSLDCPTDNR Trigger: TCGGTTGTCTGTGGGGCAGTCTAAGGAGTTCCTGCAAATCTCTGATGCTGTCCATTTCTTCACGGAGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CCA 72 bp | TCATCATTGTTCACCACACAACTGCCAGTGTGGTCTTaGAGTGGCCTTGTGTTTGCTCTTGGCCTCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSLFTTQLPVWS*SGLVFALGLLL Trigger: AAGGAGGAGGCCAAGAGCAAACACAAGGCCACTCCAAGACCACACTGGCAGTTGTGTGGTGAACAATGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 72 bp | ATGATTATCACCATGGTTATTGCAGAGACTAGTGCTTaGGGATGGGGGCCCACACCACCAACACTCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: MIITMVIAETSA*GWGPTPPTLTH Trigger: GTGTGTGAGTGTTGGTGGTGTGGGCCCCCATCCCCAAGCACTAGTCTCTGCAATAACCATGGTGATAATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CAA 72 bp | AGCCTCCAAAAGTCTTGGATACAGGCTTCACAGAAGTaGTGGCCACAGCTTAGCATCAGTGGGTCTCGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLQKSWIQASQK*WPQLSISGSRN Trigger: GTTCCGAGACCCACTGATGCTAAGCTGTGGCCACAACTTCTGTGAAGCCTGTATCCAAGACTTTTGGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CAA 72 bp | AAGCTCCTCCGTGAAGAAATGGACAGCATCAGAGATTaGCAGGAACTCCTTAGACTGCCCCACAGACAACCG | + |
|
Preference number: 6 (lower is better) Translates to: KLLREEMDSIRD*QELLRLPHRQP Trigger: CGGTTGTCTGTGGGGCAGTCTAAGGAGTTCCTGCAAATCTCTGATGCTGTCCATTTCTTCACGGAGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS GCA 72 bp | TTTTCACTCCCTCCTCATCATTGTTCACCACACAACTaGCAGTGTGGTCTTGGAGTGGCCTTGTGTTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSLPPHHCSPHN*QCGLGVALCLL Trigger: GAGCAAACACAAGGCCACTCCAAGACCACACTGGCAGTTGTGTGGTGAACAATGATGAGGAGGGAGTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 72 bp | CTCCAAAAGTCTTGGATACAGGCTTCACAGAAGTTGTaGCCACAGCTTAGCATCAGTGGGTCTCGGAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQKSWIQASQKL*PQLSISGSRNQ Trigger: TTGGTTCCGAGACCCACTGATGCTAAGCTGTGGCCACAACTTCTGTGAAGCCTGTATCCAAGACTTTTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CAA 72 bp | GTAATCCCTGCTACTTGGGAGGTTGAGACAGGAGAATaGCTTGACCTGGGAGGTGGAGGTTATAGTAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VIPATWEVETGE*LDLGGGGYSKL Trigger: CAGCTTACTATAACCTCCACCTCCCAGGTCAAGCAATTCTCCTGTCTCAACCTCCCAAGTAGCAGGGATTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CAA 90 bp | TTTGCTTGCAGCCTCCAAAAGTCTTGGATACAGGCTTCACAGAAGTaGTGGCCACAGCTTAGCATCAGTGGGTCTCGGAACCAATCATTG | + |
|
Preference number: 6 (lower is better) Translates to: FACSLQKSWIQASQK*WPQLSISGSRNQSL Trigger: CAATGATTGGTTCCGAGACCCACTGATGCTAAGCTGTGGCCACAACTTCTGTGAAGCCTGTATCCAAGACTTTTGGAGGCTGCAAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS GCA 72 bp | ACAACTGCCAGTGTGGTCTTGGAGTGGCCTTGTGTTTaGTCTTGGCCTCCTCCTTTGTTCAATAATCACTAC | + |
|
Preference number: 6 (lower is better) Translates to: TTASVVLEWPCV*SWPPPLFNNHY Trigger: GTAGTGATTATTGAACAAAGGAGGAGGCCAAGAGCAAACACAAGGCCACTCCAAGACCACACTGGCAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 72 bp | GTTCCGTCTTTGCCTGAATGCTCACCAACATATCCTTaGCTAAGAGACATTGCTCCTGAAGCTGGCTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VPSLPECSPTYP*LRDIAPEAGSD Trigger: ATCTGAGCCAGCTTCAGGAGCAATGTCTCTTAGCCAAGGATATGTTGGTGAGCATTCAGGCAAAGACGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000559390.5 ENST00000560442.5 ENST00000618398.2 ENST00000621836.3 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 |
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| CDS CCA 72 bp | TCCCTCCATACCATGTACTGGATAGGACCTTTGTACTaGCCCAGGTTCAGCTTTCTGGAAATAAGCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLHTMYWIGPLY*PRFSFLEISSL Trigger: CAGAGAGCTTATTTCCAGAAAGCTGAACCTGGGCCAGTACAAAGGTCCTATCCAGTACATGGTATGGAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000561043.5 ENST00000561170.1 ENST00000618398.2 ENST00000621836.3 ENST00000631458.1 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 ENST00000633859.1 |
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| CDS CCA 72 bp | GACAGGAAGGAACAAGGGTGCTTAGCCTCTATAAACTaGCCAGAACCAGCCCATAGTCAGTGGTCTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: DRKEQGCLASIN*PEPAHSQWSSY Trigger: ATAAGAAGACCACTGACTATGGGCTGGTTCTGGCCAGTTTATAGAGGCTAAGCACCCTTGTTCCTTCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560141.2 |
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| CDS CAA 72 bp | CCACAGCTTAGCATCAGTGGGTCTCGGAACCAATCATaGCACAGAGGGCAGTGTAGCTCCATAGTAATATCT | + |
|
Preference number: 6 (lower is better) Translates to: PQLSISGSRNQS*HRGQCSSIVIS Trigger: AGATATTACTATGGAGCTACACTGCCCTCTGTGCAATGATTGGTTCCGAGACCCACTGATGCTAAGCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CAA 72 bp | TGGGCCTCCTTCTCTGGCTATAGGGAATGCTCAGGCTaGTCTGGAATTCACCATGCTGTCTCAGCTTATTAT | + |
|
Preference number: 6 (lower is better) Translates to: WASFSGYRECSG*SGIHHAVSAYY Trigger: ATAATAAGCTGAGACAGCATGGTGAATTCCAGACAAGCCTGAGCATTCCCTATAGCCAGAGAAGGAGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000560141.2 ENST00000561237.1 ENST00000632277.1 ENST00000634142.1 |
||
| CDS CAA 72 bp | CAAAAGCTGCCAAGTGGTACTGTTAGACTGGGGGTATaGGGAGGCTGGAAGAACTGTCCTTACCTAGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: QKLPSGTVRLGV*GGWKNCPYLEI Trigger: GATTTCTAGGTAAGGACAGTTCTTCCAGCCTCCCAATACCCCCAGTCTAACAGTACCACTTGGCAGCTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CAA 90 bp | AAGTTGTGGCCACAGCTTAGCATCAGTGGGTCTCGGAACCAATCATaGCACAGAGGGCAGTGTAGCTCCATAGTAATATCTTGTATCACC | + |
|
Preference number: 6 (lower is better) Translates to: KLWPQLSISGSRNQS*HRGQCSSIVISCIT Trigger: GGTGATACAAGATATTACTATGGAGCTACACTGCCCTCTGTGCAATGATTGGTTCCGAGACCCACTGATGCTAAGCTGTGGCCACAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CAA 90 bp | CAGGAACTCCTTAGACTGCCCCACAGACAACCGAGCATCCTTGCATaGAAAGCAGATCAGTTTCCCATCTGGTTTACTGAACAGTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QELLRLPHRQPSILA*KADQFPIWFTEQFQ Trigger: CTGAAACTGTTCAGTAAACCAGATGGGAAACTGATCTGCTTTCAATGCAAGGATGCTCGGTTGTCTGTGGGGCAGTCTAAGGAGTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CAA 90 bp | AGAGTGTCCTGCATTTCCCTCCATACCATGTACTGGATAGGACCTTaGTACTGGCCCAGGTTCAGCTTTCTGGAAATAAGCTCTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RVSCISLHTMYWIGP*YWPRFSFLEISSLV Trigger: AACCAGAGAGCTTATTTCCAGAAAGCTGAACCTGGGCCAGTACAAAGGTCCTATCCAGTACATGGTATGGAGGGAAATGCAGGACACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000561043.5 ENST00000561170.1 ENST00000618398.2 ENST00000621836.3 ENST00000631458.1 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 ENST00000633859.1 |
||
| CDS CAA 90 bp | TTGGTAATCCAAAAGCTGCCAAGTGGTACTGTTAGACTGGGGGTATaGGGAGGCTGGAAGAACTGTCCTTACCTAGAAATCAGAACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LVIQKLPSGTVRLGV*GGWKNCPYLEIRTG Trigger: CCCAGTTCTGATTTCTAGGTAAGGACAGTTCTTCCAGCCTCCCAATACCCCCAGTCTAACAGTACCACTTGGCAGCTTTTGGATTACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
||
| CDS CAA 90 bp | GTTAGGTGTTGGGCCTCCTTCTCTGGCTATAGGGAATGCTCAGGCTaGTCTGGAATTCACCATGCTGTCTCAGCTTATTATAGTATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VRCWASFSGYRECSG*SGIHHAVSAYYSIP Trigger: TGGAATACTATAATAAGCTGAGACAGCATGGTGAATTCCAGACAAGCCTGAGCATTCCCTATAGCCAGAGAAGGAGGCCCAACACCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000560141.2 ENST00000561237.1 ENST00000632277.1 ENST00000634142.1 |
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| CDS TCA 72 bp | TTAGACTGCCCCACAGACAACCGAGCATCCTTGCATTaGAAGCAGATCAGTTTCCCATCTGGTTTACTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LDCPTDNRASLH*KQISFPSGLLN Trigger: GTTCAGTAAACCAGATGGGAAACTGATCTGCTTTCAATGCAAGGATGCTCGGTTGTCTGTGGGGCAGTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS TCA 72 bp | AACCATAAAAGAGACGGAGATATAATGAAGCGTGTCTaGCCTCCCATCCCGTCATGGCCAGGAACTCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NHKRDGDIMKRV*PPIPSWPGTQF Trigger: AAACTGAGTTCCTGGCCATGACGGGATGGGAGGTCAGACACGCTTCATTATATCTCCGTCTCTTTTATGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
||
| CDS TCA 72 bp | GACCAGACACATTTCAACGCCACGACAGTCACCTGGTaGCTGAACTATCGAAAAGATCAGCATATTAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: DQTHFNATTVTW*LNYRKDQHIRG Trigger: TCCCCTAATATGCTGATCTTTTCGATAGTTCAGTCACCAGGTGACTGTCGTGGCGTTGAAATGTGTCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS GCA 72 bp | AGCTCAGAGCATTGGATGCCAACAACCCATAGTTCCTaGACAAAGACATGGAAAAATCCAGCCACAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: SSEHWMPTTHSS*TKTWKNPATGS Trigger: AGATCCTGTGGCTGGATTTTTCCATGTCTTTGTGCAGGAACTATGGGTTGTTGGCATCCAATGCTCTGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 72 bp | GAGGTCAGATTTCCCCACATATTTGAACCCTTATTCTaGGTCCAGTCCTGTCTTCACTTCCACAACTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EVRFPHIFEPLF*VQSCLHFHNCC Trigger: ACAGCAGTTGTGGAAGTGAAGACAGGACTGGACCCAGAATAAGGGTTCAAATATGTGGGGAAATCTGACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000560141.2 ENST00000561237.1 ENST00000632277.1 ENST00000634142.1 |
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| CDS CAA 72 bp | CTTAGACTGCCCCACAGACAACCGAGCATCCTTGCATaGAAAGCAGATCAGTTTCCCATCTGGTTTACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LRLPHRQPSILA*KADQFPIWFTE Trigger: TTCAGTAAACCAGATGGGAAACTGATCTGCTTTCAATGCAAGGATGCTCGGTTGTCTGTGGGGCAGTCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CAA 72 bp | TGCATTTCCCTCCATACCATGTACTGGATAGGACCTTaGTACTGGCCCAGGTTCAGCTTTCTGGAAATAAGC | + |
|
Preference number: 6 (lower is better) Translates to: CISLHTMYWIGP*YWPRFSFLEIS Trigger: GCTTATTTCCAGAAAGCTGAACCTGGGCCAGTACAAAGGTCCTATCCAGTACATGGTATGGAGGGAAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000561043.5 ENST00000561170.1 ENST00000618398.2 ENST00000621836.3 ENST00000631458.1 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 ENST00000633859.1 |
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| CDS CAA 72 bp | CATTATCTTCTTAATGTCACCATGCCAGACGCTGGTTaGGCTTTTGGAGAGCACCAGATTTGGGTGAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HYLLNVTMPDAG*AFGEHQIWVSC Trigger: ACAGCTCACCCAAATCTGGTGCTCTCCAAAAGCCAAACCAGCGTCTGGCATGGTGACATTAAGAAGATAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000561043.5 ENST00000561170.1 ENST00000618398.2 ENST00000621836.3 ENST00000631458.1 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 ENST00000633859.1 |
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| CDS CAA 90 bp | AGAAGCAGCAAGGCCAGAGTGAGGTCTGGCAGATTCCGTGACAGTTaGTCAGTTAACTTTGATCATCATTTGCGAGATGGTACTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSSKARVRSGRFRDS*SVNFDHHLRDGTSL Trigger: AAGAGAAGTACCATCTCGCAAATGATGATCAAAGTTAACTGACAAACTGTCACGGAATCTGCCAGACCTCACTCTGGCCTTGCTGCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559315.1 ENST00000632766.1 |
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| CDS TCA 72 bp | AGACACATTTCAACGCCACGACAGTCACCTGGTGACTaGACTATCGAAAAGATCAGCATATTAGGGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RHISTPRQSPGD*TIEKISILGER Trigger: CCTTTCCCCTAATATGCTGATCTTTTCGATAGTTCAGTCACCAGGTGACTGTCGTGGCGTTGAAATGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS GCA 72 bp | AGCATCTTACACTCAGGACAGAATGTTTCCTTTGCTTaGAGCCTCCAAAAGTCTTGGATACAGGCTTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SILHSGQNVSFA*SLQKSWIQASQ Trigger: CTGTGAAGCCTGTATCCAAGACTTTTGGAGGCTGCAAGCAAAGGAAACATTCTGTCCTGAGTGTAAGATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS GCA 72 bp | CCTCTTCCCGGAGCTCAGTTAAAATGTCCTTTTCTTTaGTGTGCAGGAACTGATGCAGCTTTAGAAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLPGAQLKCPFL*CAGTDAALETP Trigger: TGGAGTTTCTAAAGCTGCATCAGTTCCTGCACAGCAAAGAAAAGGACATTTTAACTGAGCTCCGGGAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000618398.2 ENST00000621836.3 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 |
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| CDS GCA 72 bp | AGTCGAAGGAGTTCTGTTGTTCCGTCTTTGCCTGAATaGTCACCAACATATCCTTGGCTAAGAGACATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRRSSVVPSLPE*SPTYPWLRDIA Trigger: AGCAATGTCTCTTAGCCAAGGATATGTTGGTGAGCATTCAGGCAAAGACGGAACAACAGAACTCCTTCGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000559390.5 ENST00000560442.5 ENST00000618398.2 ENST00000621836.3 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 |
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| CDS GCA 72 bp | AACTACTTCATCACTTTCCCCAAGTTCTATCAGTTCTaGATCCAAGGCTATGTTAGGTGTTGGGCCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NYFITFPKFYQF*IQGYVRCWASF Trigger: GAAGGAGGCCCAACACCTAACATAGCCTTGGATGCAGAACTGATAGAACTTGGGGAAAGTGATGAAGTAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CCA 72 bp | TGGATGCCAACAACCCATAGTTCCTGCACAAAGACATaGAAAAATCCAGCCACAGGATCTGTCTTGAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: WMPTTHSSCTKT*KNPATGSVLSN Trigger: ATTGCTCAAGACAGATCCTGTGGCTGGATTTTTCCATGTCTTTGTGCAGGAACTATGGGTTGTTGGCATCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CAA 72 bp | GGTCTGGCAGATTCCGTGACAGTTTGTCAGTTAACTTaGATCATCATTTGCGAGATGGTACTTCTCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLADSVTVCQLT*IIICEMVLLLG Trigger: GCCCAAGAGAAGTACCATCTCGCAAATGATGATCAAAGTTAACTGACAAACTGTCACGGAATCTGCCAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559315.1 ENST00000632766.1 |
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| CDS CAA 72 bp | AAGGCCAGAGTGAGGTCTGGCAGATTCCGTGACAGTTaGTCAGTTAACTTTGATCATCATTTGCGAGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: KARVRSGRFRDS*SVNFDHHLRDG Trigger: ACCATCTCGCAAATGATGATCAAAGTTAACTGACAAACTGTCACGGAATCTGCCAGACCTCACTCTGGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559315.1 ENST00000632766.1 |
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| CDS CAA 90 bp | AAAGACCAGAGACAGGCACTTCAAAGGAGGAGCAGGGGTAGGAACTaGATGCTGAATAGGTTGGCTAAACATACATATTCAACAGGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: KDQRQALQRRSRGRN*MLNRLAKHTYSTGY Trigger: GTAACCTGTTGAATATGTATGTTTAGCCAACCTATTCAGCATCAAGTTCCTACCCCTGCTCCTCCTTTGAAGTGCCTGTCTCTGGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560141.2 |
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| CDS CAA 90 bp | TGTCCTTACCTAGAAATCAGAACTGGGGGAATGCCACTGTTACACTaGCAGCTTTTTCCTTGGGTTACCTCAACATCCTCACAGTTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: CPYLEIRTGGMPLLH*QLFPWVTSTSSQLN Trigger: GTTTAACTGTGAGGATGTTGAGGTAACCCAAGGAAAAAGCTGCAAGTGTAACAGTGGCATTCCCCCAGTTCTGATTTCTAGGTAAGGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS TCA 72 bp | AGAAAGTCGAAGGAGTTCTGTTGTTCCGTCTTTGCCTaGATGCTCACCAACATATCCTTGGCTAAGAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: RKSKEFCCSVFA*MLTNISLAKRH Trigger: ATGTCTCTTAGCCAAGGATATGTTGGTGAGCATTCAGGCAAAGACGGAACAACAGAACTCCTTCGACTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000559390.5 ENST00000560442.5 ENST00000618398.2 ENST00000621836.3 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 |
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| CDS TCA 72 bp | GGAAGATCTCTTGAGCCCAAGAGTATGAGGTTACAGTaGGCCCATATCCACCTCATCAATATCATCTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GRSLEPKSMRLQ*AHIHLINIILL Trigger: AAGCAAGATGATATTGATGAGGTGGATATGGGCTCACTGTAACCTCATACTCTTGGGCTCAAGAGATCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS TCA 72 bp | CCTTCATTCCTTGCTCCAAGCTATGTAAGAGAGTTGTaGTGTCCAACATATCCTTGGCTAAGAGACATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSFLAPSYVREL*CPTYPWLRDIA Trigger: AGCAATGTCTCTTAGCCAAGGATATGTTGGACATCACAACTCTCTTACATAGCTTGGAGCAAGGAATGAAGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000558329.5 ENST00000561170.1 ENST00000631458.1 ENST00000631740.1 |
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| CDS CAA 72 bp | AGTTGTGATGTCTTTGAGAAAGTCGAAGGAGTTCTGTaGTTCCGTCTTTGCCTGAATGCTCACCAACATATC | + |
|
Preference number: 6 (lower is better) Translates to: SCDVFEKVEGVL*FRLCLNAHQHI Trigger: GATATGTTGGTGAGCATTCAGGCAAAGACGGAACAACAGAACTCCTTCGACTTTCTCAAAGACATCACAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000559390.5 ENST00000560442.5 ENST00000618398.2 ENST00000621836.3 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 |
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| CDS CAA 72 bp | AAGGCCAGAGTGAGGTCTGGCAGATTCCGTGACAGTTaGTCAGTTAACTTTGATCATCATTTGCTTAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KARVRSGRFRDS*SVNFDHHLLKR Trigger: TCTCTTAAGCAAATGATGATCAAAGTTAACTGACAAACTGTCACGGAATCTGCCAGACCTCACTCTGGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000559390.5 ENST00000621836.3 ENST00000633414.1 |
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| CDS CAA 72 bp | ACCAGGCTCACTCAGATACTCCTATTGCAACAATTATaGGATCTCATTGAAACCTCCTATTCACCGATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TRLTQILLLQQL*DLIETSYSPIP Trigger: AGGGATCGGTGAATAGGAGGTTTCAATGAGATCCAATAATTGTTGCAATAGGAGTATCTGAGTGAGCCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CAA 90 bp | TGTTATACTGACATAGCATCTTACACTCAGGACAGAATGTTTCCTTaGCTTGCAGCCTCCAAAAGTCTTGGATACAGGCTTCACAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CYTDIASYTQDRMFP*LAASKSLGYRLHRS Trigger: ACTTCTGTGAAGCCTGTATCCAAGACTTTTGGAGGCTGCAAGCAAAGGAAACATTCTGTCCTGAGTGTAAGATGCTATGTCAGTATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS CAA 90 bp | CAGCTTTTTCCTTGGGTTACCTCAACATCCTCACAGTTAAACTATTaGACATCCTGGCTTCTCAGTTCCTCATTCTCCTCATTTCTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLFPWVTSTSSQLNY*TSWLLSSSFSSFLV Trigger: CACTAGAAATGAGGAGAATGAGGAACTGAGAAGCCAGGATGTCAAATAGTTTAACTGTGAGGATGTTGAGGTAACCCAAGGAAAAAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS TCA 72 bp | TCAGTTAAAATGTCCTTTTCTTTGCTGTGCAGGAACTaGTGCAGCTTTAGAAACTCCATGGACACATGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SVKMSFSLLCRN*CSFRNSMDTCC Trigger: GCAACATGTGTCCATGGAGTTTCTAAAGCTGCATCAGTTCCTGCACAGCAAAGAAAAGGACATTTTAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000329464.9 ENST00000338264.8 ENST00000558173.5 ENST00000558329.5 ENST00000559390.5 ENST00000560442.5 ENST00000618398.2 ENST00000621836.3 ENST00000631740.1 ENST00000631767.1 ENST00000633106.1 ENST00000633414.1 |
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| CDS GCA 72 bp | ATCGAAAAGATCAGCATATTAGGGGAAAGGTTAATCTaGTCTGTTGATCAGCTATTAGGAACCTACTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: IEKISILGERLI*SVDQLLGTYST Trigger: GGTGGAGTAGGTTCCTAATAGCTGATCAACAGAGCAGATTAACCTTTCCCCTAATATGCTGATCTTTTCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS GCA 72 bp | TACAGTGAGCCCATATCCACCTCATCAATATCATCTTaGTTAGCATGTTCCAGCTTTATTGGCCTTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YSEPISTSSISS*LACSSFIGLFS Trigger: AGAGAAAAGGCCAATAAAGCTGGAACATGCTAAGCAAGATGATATTGATGAGGTGGATATGGGCTCACTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CCA 72 bp | ACCTCAACATCCTCACAGTTAAACTATTTGACATCCTaGCTTCTCAGTTCCTCATTCTCCTCATTTCTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSTSSQLNYLTS*LLSSSFSSFLV Trigger: CACTAGAAATGAGGAGAATGAGGAACTGAGAAGCCAGGATGTCAAATAGTTTAACTGTGAGGATGTTGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CAA 90 bp | AGTTCCTGCACAAAGACATGGAAAAATCCAGCCACAGGATCTGTCTaGAGCAATAAGGCATACATCATATATAACTGCAGTGATACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSCTKTWKNPATGSV*SNKAYIIYNCSDTD Trigger: ATCAGTATCACTGCAGTTATATATGATGTATGCCTTATTGCTCAAGACAGATCCTGTGGCTGGATTTTTCCATGTCTTTGTGCAGGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS TCA 72 bp | TTGTCCAGTACAGGGTTGAATGTACAGTTGTTATACTaGCATAGCATCTTACACTCAGGACAGAATGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSSTGLNVQLLY*HSILHSGQNVS Trigger: GGAAACATTCTGTCCTGAGTGTAAGATGCTATGTCAGTATAACAACTGTACATTCAACCCTGTACTGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000329464.9 ENST00000558173.5 ENST00000559390.5 ENST00000621836.3 ENST00000631767.1 ENST00000633414.1 |
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| CDS TCA 72 bp | CAAAGACATGGAAAAATCCAGCCACAGGATCTGTCTTaGGCAATAAGGCATACATCATATATAACTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: QRHGKIQPQDLS*AIRHTSYITAV Trigger: CACTGCAGTTATATATGATGTATGCCTTATTGCTCAAGACAGATCCTGTGGCTGGATTTTTCCATGTCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CAA 90 bp | GGAGGAGCTATGAATAATTATGAAGGTCATCCTGACTCATGCTTATaGAACAAACATGCATGTAACATACAACCCATGTTCACTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GGAMNNYEGHPDSCL*NKHACNIQPMFTLR Trigger: CCTCAAAGTGAACATGGGTTGTATGTTACATGCATGTTTGTTCAATAAGCATGAGTCAGGATGACCTTCATAATTATTCATAGCTCCTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560141.2 |
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| CDS CAA 90 bp | CTCCAAAATAACTTTTTATGCACCAGGCTCACTCAGATACTCCTATaGCAACAATTATTGGATCTCATTGAAACCTCCTATTCACCGATC | + |
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Preference number: 6 (lower is better) Translates to: LQNNFLCTRLTQILL*QQLLDLIETSYSPI Trigger: GATCGGTGAATAGGAGGTTTCAATGAGATCCAATAATTGTTGCAATAGGAGTATCTGAGTGAGCCTGGTGCATAAAAAGTTATTTTGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS TCA 72 bp | GACAAGGAAGGAATCTTGAAAGCAGCAAGAGAGAAATaGCTCTTCACATACAAGGGATTCTCAGTAAGATTA | + |
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Preference number: 6 (lower is better) Translates to: DKEGILKAAREK*LFTYKGFSVRL Trigger: TAATCTTACTGAGAATCCCTTGTATGTGAAGAGTCATTTCTCTCTTGCTGCTTTCAAGATTCCTTCCTTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CCA 72 bp | TACTTCACCATCTCTAGGGTGTTGTCTTTATTTATGTaGTCCAGAATGTCCACATGTGGCCAACTAAAAATT | + |
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Preference number: 6 (lower is better) Translates to: YFTISRVLSLFM*SRMSTCGQLKI Trigger: AATTTTTAGTTGGCCACATGTGGACATTCTGGACCACATAAATAAAGACAACACCCTAGAGATGGTGAAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS CAA 72 bp | ACAAAGACATGGAAAAATCCAGCCACAGGATCTGTCTaGAGCAATAAGGCATACATCATATATAACTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TKTWKNPATGSV*SNKAYIIYNCS Trigger: ACTGCAGTTATATATGATGTATGCCTTATTGCTCAAGACAGATCCTGTGGCTGGATTTTTCCATGTCTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000560141.2 ENST00000634142.1 |
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| CDS GCA 72 bp | GGAGCTATGAATAATTATGAAGGTCATCCTGACTCATaGTTATTGAACAAACATGCATGTAACATACAACCC | + |
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Preference number: 6 (lower is better) Translates to: GAMNNYEGHPDS*LLNKHACNIQP Trigger: GGGTTGTATGTTACATGCATGTTTGTTCAATAAGCATGAGTCAGGATGACCTTCATAATTATTCATAGCTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560141.2 |
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| CDS GCA 72 bp | ACTTTTTATGCACCAGGCTCACTCAGATACTCCTATTaGAACAATTATTGGATCTCATTGAAACCTCCTATT | + |
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Preference number: 6 (lower is better) Translates to: TFYAPGSLRYSY*NNYWISLKPPI Trigger: AATAGGAGGTTTCAATGAGATCCAATAATTGTTGCAATAGGAGTATCTGAGTGAGCCTGGTGCATAAAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CAA 72 bp | AACTTTTTATGCACCAGGCTCACTCAGATACTCCTATaGCAACAATTATTGGATCTCATTGAAACCTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: NFLCTRLTQILL*QQLLDLIETSY Trigger: ATAGGAGGTTTCAATGAGATCCAATAATTGTTGCAATAGGAGTATCTGAGTGAGCCTGGTGCATAAAAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000558173.5 ENST00000631767.1 |
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| CDS CAA 72 bp | AACAAACATGCATGTAACATACAACCCATGTTCACTTaGAGGTGGAGACTTAACTCTTTTTGTTGTTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: NKHACNIQPMFT*RWRLNSFCCCY Trigger: ATAACAACAACAAAAAGAGTTAAGTCTCCACCTCAAAGTGAACATGGGTTGTATGTTACATGCATGTTTGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000560141.2 |
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| CDS CAA 72 bp | ATGAATAATTATGAAGGTCATCCTGACTCATGCTTATaGAACAAACATGCATGTAACATACAACCCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: MNNYEGHPDSCL*NKHACNIQPMF Trigger: GAACATGGGTTGTATGTTACATGCATGTTTGTTCAATAAGCATGAGTCAGGATGACCTTCATAATTATTCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560141.2 |
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