RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM67 (Homo sapiens)

Ensembl gene IDs: ENSG00000119283

Ensembl transcript IDs: ENST00000366653.5, ENST00000366653.6, ENST00000444294.7, ENST00000449018.7

Found 645 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGGCTCCGCAGCAGAGACTGCAACACAGCACCGAGCAGCTCCTaGAGACGGGGCAGCTGGCCTTGCCGGCCACATCTGCAGAGACAG +
Preference number: 1 (lower is better)
Translates to: PRLRSRDCNTAPSSS*RRGSWPCRPHLQRQ
Trigger: CTGTCTCTGCAGATGTGGCCGGCAAGGCCAGCTGCCCCGTCTCCAGGAGCTGCTCGGTGCTGTGTTGCAGTCTCTGCTGCGGAGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp GCCTGGTTTTGGCCTCTCCTCAGAGCTTTACCCGAGGGCCTGGCCTaGTCTGCAGTGCCCGCATCACCGGCCCACAGGTCCCTAGGCCTT +
Preference number: 1 (lower is better)
Translates to: AWFWPLLRALPEGLA*SAVPASPAHRSLGL
Trigger: AAGGCCTAGGGACCTGTGGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGAGGAGAGGCCAAAACCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp CGAGCAGCTCCTGGAGACGGGGCAGCTGGCCTTGCCGGCCACATCTaGAGAGACAGCGGACCAAGCAGCCTTGCAGACCAAGAGCATGAG +
Preference number: 1 (lower is better)
Translates to: RAAPGDGAAGLAGHI*RDSGPSSLADQEHE
Trigger: CTCATGCTCTTGGTCTGCAAGGCTGCTTGGTCCGCTGTCTCTGCAGATGTGGCCGGCAAGGCCAGCTGCCCCGTCTCCAGGAGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp GGGACCAGCAGCAGCCTCCTTGACACTGAACCACCTGCCCACCGGTaGCGAAACCCGCCTTCCCAGGGGGACCAAGCCTTTCGCTTGCAA +
Preference number: 1 (lower is better)
Translates to: GTSSSLLDTEPPAHR*RNPPSQGDQAFRLQ
Trigger: TTGCAAGCGAAAGGCTTGGTCCCCCTGGGAAGGCGGGTTTCGGCACCGGTGGGCAGGTGGTTCAGTGTCAAGGAGGCTGCTGCTGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp AGAGACTGCAACACAGCACCGAGCAGCTCCTGGAGACGGGGCAGCTaGCCTTGCCGGCCACATCTGCAGAGACAGCGGACCAAGCAGCCT +
Preference number: 1 (lower is better)
Translates to: RDCNTAPSSSWRRGS*PCRPHLQRQRTKQP
Trigger: AGGCTGCTTGGTCCGCTGTCTCTGCAGATGTGGCCGGCAAGGCCAGCTGCCCCGTCTCCAGGAGCTGCTCGGTGCTGTGTTGCAGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp GATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGCCCACTaGATCAGGGCAGAGCCGTCCCGGCCTGCCACAGGGGCCACTTGT +
Preference number: 1 (lower is better)
Translates to: DTALLFPAFPRDPAH*IRAEPSRPATGATC
Trigger: ACAAGTGGCCCCTGTGGCAGGCCGGGACGGCTCTGCCCTGATGCAGTGGGCGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 90 bp GCCCGCATCACCGGCCCACAGGTCCCTAGGCCTTTCCCAGGACTGTaGTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGG +
Preference number: 1 (lower is better)
Translates to: ARITGPQVPRPFPGL*SLREERWIRTRLPW
Trigger: CCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAGTCCTGGGAAAGGCCTAGGGACCTGTGGGCCGGTGATGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 90 bp TCACCGGCCCACAGGTCCCTAGGCCTTTCCCAGGACTGTGCTCCTTaGGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTC +
Preference number: 1 (lower is better)
Translates to: SPAHRSLGLSQDCAP*EKSDGSGRDFPGGL
Trigger: GAGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAGTCCTGGGAAAGGCCTAGGGACCTGTGGGCCGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp TTCTGCTTTGCCCGCTCCCCACTTCTTCTGGGTGCCGAGAAAGCCTaGGGCTCTGGGTGTCTGGTTTCCAGGGCTAGGAGGAGTTGGAGA +
Preference number: 1 (lower is better)
Translates to: FCFARSPLLLGAEKA*GSGCLVSRARRSWR
Trigger: TCTCCAACTCCTCCTAGCCCTGGAAACCAGACACCCAGAGCCCCAGGCTTTCTCGGCACCCAGAAGAAGTGGGGAGCGGGCAAAGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp ATGTGGATCTCAAGGGAGAAGCCTGGTGTTTCCAGAGTCCTGCCCTaGCAGGTCAGACTCGGCACACCCAGTCTCACAGTGGGAAGCTGG +
Preference number: 1 (lower is better)
Translates to: MWISREKPGVSRVLP*QVRLGTPSLTVGSW
Trigger: CCAGCTTCCCACTGTGAGACTGGGTGTGCCGAGTCTGACCTGCCAGGGCAGGACTCTGGAAACACCAGGCTTCTCCCTTGAGATCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 90 bp GTCCCTAGGCCTTTCCCAGGACTGTGCTCCTTGAGAGAAGAGCGATaGATCCGGACGAGACTTCCCTGGAGGTCTCAACTCCCAGCTCCT +
Preference number: 1 (lower is better)
Translates to: VPRPFPGLCSLREER*IRTRLPWRSQLPAP
Trigger: AGGAGCTGGGAGTTGAGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAGTCCTGGGAAAGGCCTAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 90 bp TGCATGGCTCCGGCAGGCAGTTACTCAGAAAGCAGGCGCGGTGTCTaGACAGGAAGGCAGAACCAAGGACGCACAGTTGGTGCTGGTGAA +
Preference number: 1 (lower is better)
Translates to: CMAPAGSYSESRRGV*TGRQNQGRTVGAGE
Trigger: TTCACCAGCACCAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTGAGTAACTGCCTGCCGGAGCCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 90 bp GGAGTTGGAGAGGCTTCCCCGGCTGGGTCTCACCCAGTAAGCACCTaGCATGTTCCTGCTACTGCAGTTGCAAGCAGTCACCTTCCCGAA +
Preference number: 1 (lower is better)
Translates to: GVGEASPAGSHPVST*HVPATAVASSHLPE
Trigger: TTCGGGAAGGTGACTGCTTGCAACTGCAGTAGCAGGAACATGTCAGGTGCTTACTGGGTGAGACCCAGCCGGGGAAGCCTCTCCAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp CCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCTaGGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTGCCAG +
Preference number: 1 (lower is better)
Translates to: PLTVAAVSMARGPIP*VPKKMCFYDTPRCQ
Trigger: CTGGCAGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 90 bp GAGCCTGCCCAGGCTCAATCCGGAAAGCACCACCCTCCTCAAACTTaGTGGGCCATAGGGCACCTAGGGCGCTGTTGCAACTACAAAGTA +
Preference number: 1 (lower is better)
Translates to: EPAQAQSGKHHPPQT*WAIGHLGRCCNYKV
Trigger: TACTTTGTAGTTGCAACAGCGCCCTAGGTGCCCTATGGCCCACCAAGTTTGAGGAGGGTGGTGCTTTCCGGATTGAGCCTGGGCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp TGTCTGGTTTCCAGGGCTAGGAGGAGTTGGAGAGGCTTCCCCGGCTaGGTCTCACCCAGTAAGCACCTGACATGTTCCTGCTACTGCAGT +
Preference number: 1 (lower is better)
Translates to: CLVSRARRSWRGFPG*VSPSKHLTCSCYCS
Trigger: ACTGCAGTAGCAGGAACATGTCAGGTGCTTACTGGGTGAGACCCAGCCGGGGAAGCCTCTCCAACTCCTCCTAGCCCTGGAAACCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp AGGTCTTGTGTGTCACCACCAAGAGCTCTGGACAGGGCTCTGGGATaGGAGGAGGAGACCCAGAAACCGCTTGGTGAGATGACAAGGAAG +
Preference number: 1 (lower is better)
Translates to: RSCVSPPRALDRALG*EEETQKPLGEMTRK
Trigger: CTTCCTTGTCATCTCACCAAGCGGTTTCTGGGTCTCCTCCTCCCATCCCAGAGCCCTGTCCAGAGCTCTTGGTGGTGACACACAAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp CCTGCCCAGGCTCAATCCGGAAAGCACCACCCTCCTCAAACTTGGTaGGCCATAGGGCACCTAGGGCGCTGTTGCAACTACAAAGTACAT +
Preference number: 1 (lower is better)
Translates to: PAQAQSGKHHPPQTW*AIGHLGRCCNYKVH
Trigger: ATGTACTTTGTAGTTGCAACAGCGCCCTAGGTGCCCTATGGCCCACCAAGTTTGAGGAGGGTGGTGCTTTCCGGATTGAGCCTGGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp CCGGAGCGCCACAGTCCCTCTACAGATCCATGCATGACAAACCACTaGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGAT +
Preference number: 1 (lower is better)
Translates to: PERHSPSTDPCMTNH*HNLVVLNLWRPPGD
Trigger: ATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTGTCATGCATGGATCTGTAGAGGGACTGTGGCGCTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 90 bp GCCACCCCACGGGCTGTGCAGCAGTGTTCTTTAGCATTCACATGTTaGCTCCCCCTAAGGATTGACCCTCCCTCACTACCTCAAAGCCAG +
Preference number: 1 (lower is better)
Translates to: ATPRAVQQCSLAFTC*LPLRIDPPSLPQSQ
Trigger: CTGGCTTTGAGGTAGTGAGGGAGGGTCAATCCTTAGGGGGAGTCAACATGTGAATGCTAAAGAACACTGCTGCACAGCCCGTGGGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 90 bp ATCCGGACGAGACTTCCCTGGAGGTCTCAACTCCCAGCTCCTGACTaGTGTCAACGTCAATCATTGAAAAAGCCAGGGCCTCCCCCAACC +
Preference number: 1 (lower is better)
Translates to: IRTRLPWRSQLPAPD*CQRQSLKKPGPPPT
Trigger: GGTTGGGGGAGGCCCTGGCTTTTTCAATGATTGACGTTGACATCAGTCAGGAGCTGGGAGTTGAGACCTCCAGGGAAGTCTCGTCCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 90 bp ATGGATCCGGACGAGACTTCCCTGGAGGTCTCAACTCCCAGCTCCTaGCTGATGTCAACGTCAATCATTGAAAAAGCCAGGGCCTCCCCC +
Preference number: 1 (lower is better)
Translates to: MDPDETSLEVSTPSS*LMSTSIIEKARASP
Trigger: GGGGGAGGCCCTGGCTTTTTCAATGATTGACGTTGACATCAGTCAGGAGCTGGGAGTTGAGACCTCCAGGGAAGTCTCGTCCGGATCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 90 bp ACATGTTCCTGCTACTGCAGTTGCAAGCAGTCACCTTCCCGAACCTaGAGCCTGGTTTTGGCCTCTCCTCAGAGCTTTACCCGAGGGCCT +
Preference number: 1 (lower is better)
Translates to: TCSCYCSCKQSPSRT*SLVLASPQSFTRGP
Trigger: AGGCCCTCGGGTAAAGCTCTGAGGAGAGGCCAAAACCAGGCTTCAGGTTCGGGAAGGTGACTGCTTGCAACTGCAGTAGCAGGAACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp AATCAATGTGGATCTCAAGGGAGAAGCCTGGTGTTTCCAGAGTCCTaGCCTGGCAGGTCAGACTCGGCACACCCAGTCTCACAGTGGGAA +
Preference number: 1 (lower is better)
Translates to: NQCGSQGRSLVFPES*PGRSDSAHPVSQWE
Trigger: TTCCCACTGTGAGACTGGGTGTGCCGAGTCTGACCTGCCAGGGCAGGACTCTGGAAACACCAGGCTTCTCCCTTGAGATCCACATTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR TCA 90 bp GGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATaGCACTCCACGCTGCCAGGTTGCACCCATGATTTGCATATCCTG +
Preference number: 1 (lower is better)
Translates to: GPWTHSLRPQENVFL*HSTLPGCTHDLHIL
Trigger: CAGGATATGCAAATCATGGGTGCAACCTGGCAGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR TCA 90 bp GAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGCATaGCAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGC +
Preference number: 1 (lower is better)
Translates to: EQSSRSATVPLQIHA*QTTGITWWFSTCGG
Trigger: GCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTGTCATGCATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 90 bp TGCTTTCTAGGAAGTGGGGAGCGGGCAGGGGGCATCTTCAGTGAGTaGAAATTCAAGACCCAACAGGTTGGCATCTGTTGGAGGTGGCTC +
Preference number: 1 (lower is better)
Translates to: CFLGSGERAGGIFSE*KFKTQQVGICWRWL
Trigger: GAGCCACCTCCAACAGATGCCAACCTGTTGGGTCTTGAATTTTCACTCACTGAAGATGCCCCCTGCCCGCTCCCCACTTCCTAGAAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp AGGAAGGGTTCCCTGGGAACAAGAGCCTGGCAGGCTCAAAACCCCTaGCATGAGCTGTCTCTGAGAGGTGTGGATGAATCAATGTGGATC +
Preference number: 1 (lower is better)
Translates to: RKGSLGTRAWQAQNP*HELSLRGVDESMWI
Trigger: GATCCACATTGATTCATCCACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGTTCCCAGGGAACCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 90 bp AACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGGATGAATCAATGTaGATCTCAAGGGAGAAGCCTGGTGTTTCCAGAGTCCTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: NPCHELSLRGVDESM*ISREKPGVSRVLPW
Trigger: CCAGGGCAGGACTCTGGAAACACCAGGCTTCTCCCTTGAGATCCACATTGATTCATCCACACCTCTCAGAGACAGCTCATGGCAGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR TCA 90 bp GAACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTaGGAGGTGTGGATGAATCAATGTGGATCTCAAGGGAGAAGCCTG +
Preference number: 1 (lower is better)
Translates to: EQEPGRLKTPAMSCL*EVWMNQCGSQGRSL
Trigger: CAGGCTTCTCCCTTGAGATCCACATTGATTCATCCACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 90 bp CACCCTCCTCAAACTTGGTGGGCCATAGGGCACCTAGGGCGCTGTTaGAACTACAAAGTACATATCAGGCTGAAGATGCAGCCTGGAAAT +
Preference number: 1 (lower is better)
Translates to: HPPQTWWAIGHLGRC*NYKVHIRLKMQPGN
Trigger: ATTTCCAGGCTGCATCTTCAGCCTGATATGTACTTTGTAGTTGCAACAGCGCCCTAGGTGCCCTATGGCCCACCAAGTTTGAGGAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp TATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATaGATGACAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGG +
Preference number: 1 (lower is better)
Translates to: YGTKQPERHSPSTDP*MTNHWHNLVVLNLW
Trigger: CCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTGTCATGCATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp CTTAGTGCCAACGCAGCAATCCTACATCATGCATTGAATGTTTTCTaGTTTGCCCGCTCCCCACTTCTTCTGGGTGCCGAGAAAGCCTGG +
Preference number: 1 (lower is better)
Translates to: LSANAAILHHALNVF*FARSPLLLGAEKAW
Trigger: CCAGGCTTTCTCGGCACCCAGAAGAAGTGGGGAGCGGGCAAAGCAGAAAACATTCAATGCATGATGTAGGATTGCTGCGTTGGCACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp TTAAAGGTCTATTTTACCCACTGGAGGCCAGGCAGCTCCTTGCCCTaGTCACAAGGAGGCTTGGATGGAAGACACTGGTCAGAGAACACT +
Preference number: 1 (lower is better)
Translates to: LKVYFTHWRPGSSLP*SQGGLDGRHWSENT
Trigger: AGTGTTCTCTGACCAGTGTCTTCCATCCAAGCCTCCTTGTGACCAGGGCAAGGAGCTGCCTGGCCTCCAGTGGGTAAAATAGACCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp AGGACCAAGAAGCTAAAAGATAACTTTCTCAGCATGATGAGAATCTaGAATCTCGGGACTCTGAGGAGGCAAGGTCCCCACGGAGGGCCA +
Preference number: 1 (lower is better)
Translates to: RTKKLKDNFLSMMRI*NLGTLRRQGPHGGP
Trigger: TGGCCCTCCGTGGGGACCTTGCCTCCTCAGAGTCCCGAGATTGCAGATTCTCATCATGCTGAGAAAGTTATCTTTTAGCTTCTTGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR TCA 90 bp ATACTTTTGGTTGTCACACCTAACTTGGGGGTTGCTACTGGCAGATaGTGGGTAGAGACCAGGGATGTTGCTAAACATCCTACGGCATAC +
Preference number: 1 (lower is better)
Translates to: ILLVVTPNLGVATGR*WVETRDVAKHPTAY
Trigger: GTATGCCGTAGGATGTTTAGCAACATCCCTGGTCTCTACCCATCATCTGCCAGTAGCAACCCCCAAGTTAGGTGTGACAACCAAAAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp CCTTCAAAACTTCGGCTCAGTTGCATCTCTTCGTGCTATCCACACTaGATTTCAAACCCATTCACACTGCAGAGACCCCTCGAAACAAAG +
Preference number: 1 (lower is better)
Translates to: PSKLRLSCISSCYPH*ISNPFTLQRPLETK
Trigger: CTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGGGTTTGAAATCCAGTGTGGATAGCACGAAGAGATGCAACTGAGCCGAAGTTTTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 90 bp CATGATGTAACGTGTTATGGAATTCGATGGTGGATGAGAATTCCATaGCCTGTCTGTCATTTCTACTCTGAAACCCGGGACCTTCCTGGC +
Preference number: 1 (lower is better)
Translates to: HDVTCYGIRWWMRIP*PVCHFYSETRDLPG
Trigger: GCCAGGAAGGTCCCGGGTTTCAGAGTAGAAATGACAGACAGGTCATGGAATTCTCATCCACCATCGAATTCCATAACACGTTACATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp TATGACACTCCACGCTGCCAGGTTGCACCCATGATTTGCATATCCTaGTTTTGTGGGTTATTTGAGCTTAGTGAGAATGGTGGGCGTTTT +
Preference number: 1 (lower is better)
Translates to: YDTPRCQVAPMICIS*FCGLFELSENGGRF
Trigger: AAAACGCCCACCATTCTCACTAAGCTCAAATAACCCACAAAAGCAGGATATGCAAATCATGGGTGCAACCTGGCAGCGTGGAGTGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR TCA 90 bp TGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGGTGCTGGTaGATGGGCGAATTTTATAAAAATCCAGTCCAGCAAATTGACAAG +
Preference number: 1 (lower is better)
Translates to: CLNRKAEPRTHSWCW*MGEFYKNPVQQIDK
Trigger: CTTGTCAATTTGCTGGACTGGATTTTTATAAAATTCGCCCATTCACCAGCACCAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 90 bp TACAGCCTAGATATTAGGTTAAAGCTGCAGGATCCTTTGATCTTCTaGGAGGAACTGCCAAAGAATGTGGTCAACAAACACAGCTACCGG +
Preference number: 1 (lower is better)
Translates to: YSLDIRLKLQDPLIF*EELPKNVVNKHSYR
Trigger: CCGGTAGCTGTGTTTGTTGACCACATTCTTTGGCAGTTCCTCCCAGAAGATCAAAGGATCCTGCAGCTTTAACCTAATATCTAGGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp ATGTGTTTCTATGACACTCCACGCTGCCAGGTTGCACCCATGATTTaGATATCCTGCTTTTGTGGGTTATTTGAGCTTAGTGAGAATGGT +
Preference number: 1 (lower is better)
Translates to: MCFYDTPRCQVAPMI*ISCFCGLFELSENG
Trigger: ACCATTCTCACTAAGCTCAAATAACCCACAAAAGCAGGATATGCAAATCATGGGTGCAACCTGGCAGCGTGGAGTGTCATAGAAACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR TCA 90 bp AGAAAATGTGTTTCTATGACACTCCACGCTGCCAGGTTGCACCCATaGTTTGCATATCCTGCTTTTGTGGGTTATTTGAGCTTAGTGAGA +
Preference number: 1 (lower is better)
Translates to: RKCVSMTLHAARLHP*FAYPAFVGYLSLVR
Trigger: TCTCACTAAGCTCAAATAACCCACAAAAGCAGGATATGCAAATCATGGGTGCAACCTGGCAGCGTGGAGTGTCATAGAAACACATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 90 bp AGAAGAAGAGAGAAAGAGAAGGAGGGAGGGAGAAGAAATGAAGGATaGAGGAAGAGAGAGAGAGAACACAATTGGCTGATTAATAAAGGA +
Preference number: 1 (lower is better)
Translates to: RRREKEKEGGRRNEG*RKREREHNWLINKG
Trigger: TCCTTTATTAATCAGCCAATTGTGTTCTCTCTCTCTCTTCCTCCATCCTTCATTTCTTCTCCCTCCCTCCTTCTCTTTCTCTCTTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 90 bp AAAGGCATACACTTTGACCAAGCTTGCTCACTAGCAAAGAACAACTaGAGAACCACATTACAGAGGCACTATTTACAATGCAATGGAACT +
Preference number: 1 (lower is better)
Translates to: KGIHFDQACSLAKNN*RTTLQRHYLQCNGT
Trigger: AGTTCCATTGCATTGTAAATAGTGCCTCTGTAATGTGGTTCTGCAGTTGTTCTTTGCTAGTGAGCAAGCTTGGTCAAAGTGTATGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 90 bp CAACAAAAGCCTCATCTTGATATCATTTATATGTATGTACAAATGTaGCACCATGATGTAACGTGTTATGGAATTCGATGGTGGATGAGA +
Preference number: 1 (lower is better)
Translates to: QQKPHLDIIYMYVQM*HHDVTCYGIRWWMR
Trigger: TCTCATCCACCATCGAATTCCATAACACGTTACATCATGGTGGCACATTTGTACATACATATAAATGATATCAAGATGAGGCTTTTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCAGAGGCCACCGGATTTaGGGGCATTACCCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPRGHRI*GHYPPA
Trigger: TGCAGGAGGGTAATGCCCTCAAATCCGGTGGCCTCT...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCAGAGCCGTCCCGGCCTaGCACAGGGGCCACTTGTGT +
Preference number: 2 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTARAVPA*HRGHLC
Trigger: ACACAAGTGGCCCCTGTGGCAGGCCGGGACGGCTCT...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR GCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTTCCACGCTGCCAGGTTaGACCCATGATTTGCATATC +
Preference number: 2 (lower is better)
Translates to: TEGQHPGRGITAQLLTAASTLPG*THDLHI
Trigger: GATATGCAAATCATGGGTGCAACCTGGCAGCGTGGA...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR GCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCAGCGCAGCTCCTGACTaGCGCTCTCAGGAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTASAAPD*RSQEAS
Trigger: ACTGGCCTCCTGAGAGCGGCAGTCAGGAGCTGCGCT...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCTGTGAGCATGGCCCGTaGACCCATTCCCTGCGTCCC +
Preference number: 2 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTACEHGP*THSLRP
Trigger: GGGACGCAGGGAATGGGTCCACGGGCCATGCTCACA...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCCTCACAGTGGGAAGCTaGGAGACAAGGTACCTGATA +
Preference number: 2 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPLTVGS*ETRYLI
Trigger: TATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAG...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 90 bp ATCACCGGCCCACAGGTCCCTAGGCCTTTCCCAGGACTGTGCTCCTaGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: ITGPQVPRPFPGLCS*REERWIRTRLPWRS
Trigger: AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAGTCCTGGGAAAGGCCTAGGGACCTGTGGGCCGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGCCAACACCCGGGGCGTaGGATTACAGCGCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVPTPGA*DYSAAP
Trigger: AGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGG...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR GCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGAGAGCCGTCCCGGCCTaGCACAGGGGCCACTTGTGT +
Preference number: 2 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPRAVPA*HRGHLC
Trigger: ACACAAGTGGCCCCTGTGGCAGGCCGGGACGGCTCT...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CAA 90 bp AGAGCCTGCCCAGGCTCAATCCGGAAAGCACCACCCTCCTCAAACTaGGTGGGCCATAGGGCACCTAGGGCGCTGTTGCAACTACAAAGT +
Preference number: 2 (lower is better)
Translates to: RACPGSIRKAPPSSN*VGHRAPRALLQLQS
Trigger: ACTTTGTAGTTGCAACAGCGCCCTAGGTGCCCTATGGCCCACCAAGTTTGAGGAGGGTGGTGCTTTCCGGATTGAGCCTGGGCAGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTGTGTTTCCAGAGTCCTaGCCTGGCAGGTCAGACTCG +
Preference number: 2 (lower is better)
Translates to: LCSLREERWIRTRLPWRSVFPES*PGRSDS
Trigger: CGAGTCTGACCTGCCAGGGCAGGACTCTGGAAACAC...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAATGTGAGCATGGCCCGTaGACCCATTCCCTGCGTCCC +
Preference number: 2 (lower is better)
Translates to: IARAGEAPAVPAVISHLKCEHGP*THSLRP
Trigger: GGGACGCAGGGAATGGGTCCACGGGCCATGCTCACA...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGAGCCCACTCTCATTCTaGGGGCAGGGTGTAGGCCTG +
Preference number: 2 (lower is better)
Translates to: HSHRAPFKQASPGMETYGSPLSF*GQGVGL
Trigger: CAGGCCTACACCCTGCCCCCAGAATGAGAGTGGGCT...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGGCAATCTCGGGACTCTaGGGAGGCAAGGTCCCCACG +
Preference number: 2 (lower is better)
Translates to: RPATGATCVHDAFIMTIGAISGL*GGKVPT
Trigger: CGTGGGGACCTTGCCTCCTCAGAGTCCCGAGATTGC...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGGCAATCTCGGGACTCTaGGGAGGCAAGGTCCCCACG +
Preference number: 2 (lower is better)
Translates to: FRRLSCLCVCEREREGGRAISGL*GGKVPT
Trigger: CGTGGGGACCTTGCCTCCTCAGAGTCCCGAGATTGC...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGAGCAGGCGCGGTGTCTaGACAGGAAGGCAGAACCAA +
Preference number: 2 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMSRRGV*TGRQNQ
Trigger: TTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCT...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGACACTTCCCAAAGCTaGTGGCTTCCTTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: HSHRAPFKQASPGMETYGDTSQS*WLPWPQ
Trigger: CTGGGGCCAAGGAAGCCATCAGCTTTGGGAAGTGTC...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACAAGCGCAGCTCCTGACTaGCGCTCTCAGGAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTSAAPD*RSQEAS
Trigger: ACTGGCCTCCTGAGAGCGGCAGTCAGGAGCTGCGCT...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGATCCAGAGTCCTGCCCTaGCAGGTCAGACTCGGCACA +
Preference number: 2 (lower is better)
Translates to: PFTLQRPLETKEASCEMRSRVLP*QVRLGT
Trigger: TGTGCCGAGTCTGACCTGCCAGGGCAGGACTCTGGA...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGCTCAAGGGAGAAGCCTaGTGTTTCCAGAGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: HSHRAPFKQASPGMETYGLKGEA*CFQSPA
Trigger: GGCAGGACTCTGGAAACACCAGGCTTCTCCCTTGAG...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGAGGGAGGAGGGAGTCCTaGCTGCACCTCTCTGGACTT +
Preference number: 2 (lower is better)
Translates to: PFTLQRPLETKEASCEMRGRRES*LHLSGL
Trigger: AAGTCCAGAGAGGTGCAGCCAGGACTCCCTCCTCCC...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGGCCAGCAGGTGGCCATaGGACCAGCAGCAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWASRWP*DQQQPP
Trigger: AGGAGGCTGCTGCTGGTCCCATGGCCACCTGCTGGC...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGTATGACACTCCACGCTaGCAGGTTGCACCCATGATT +
Preference number: 2 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVYDTPR*QVAPMI
Trigger: AATCATGGGTGCAACCTGGCAGCGTGGAGTGTCATA...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR GCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACACTCCGCAGCAGAGACTaGAACACAGCACCGAGCAGC +
Preference number: 2 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTLRSRD*NTAPSS
Trigger: GCTGCTCGGTGCTGTGTTGCAGTCTCTGCTGCGGAG...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACAGATGGGCGATTCTTCTaGAGAGCTGGGGCCACCTGG +
Preference number: 2 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTDGRFF*RAGATW
Trigger: CCAGGTGGCCCCAGCTCTGCAGAAGAATCGCCCATC...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATAGCCCCAGGCAACTTGTaGTCCAATGATGGGCGATTC +
Preference number: 2 (lower is better)
Translates to: QTTGITWWFSTCGGPQEIAPGNL*SNDGRF
Trigger: GAATCGCCCATCATTGGAGCACAAGTTGCCTGGGGC...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGGAGGTTGAGAAACCCTaGCGCCACCCCACGGGCTGT +
Preference number: 2 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWEVEKP*RHPTGC
Trigger: ACAGCCCGTGGGGTGGCGCCAGGGTTTCTCAACCTC...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 90 bp CCACCCTCCTCAAACTTGGTGGGCCATAGGGCACCTAGGGCGCTGTaGCAACTACAAAGTACATATCAGGCTGAAGATGCAGCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: PPSSNLVGHRAPRAL*QLQSTYQAEDAAWK
Trigger: TTTCCAGGCTGCATCTTCAGCCTGATATGTACTTTGTAGTTGCAACAGCGCCCTAGGTGCCCTATGGCCCACCAAGTTTGAGGAGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGGAAAATGTGTTTCTATaGCACTCCACGCTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVENVFL*HSTLPG
Trigger: ACCTGGCAGCGTGGAGTGTCATAGAAACACATTTTC...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACTTACAGCGCAGCTCCTaGCTGCCGCTCTCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDLQRSS*LPLSGG
Trigger: GCCTCCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAA...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTGAAGTAACCGAGGGCTaGACTTGGTGTCTGATCAAT +
Preference number: 2 (lower is better)
Translates to: LCSLREERWIRTRLPWRSEVTEG*TWCLIN
Trigger: ATTGATCAGACACCAAGTTCAGCCCTCGGTTACTTC...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGCGTGGACCCATTCCCTaGGTCCCCAAGAAAATGTGT +
Preference number: 2 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPRGPIP*VPKKMC
Trigger: ACACATTTTCTTGGGGACGCAGGGAATGGGTCCACG...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGCTATCAATCCTGCATTaGGTCTGCAAGTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: HSHRAPFKQASPGMETYGLSILH*VCKWQV
Trigger: CACCTGCCACTTGCAGACCCAATGCAGGATTGATAG...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 90 bp CCTGCTTTTGTGGGTTATTTGAGCTTAGTGAGAATGGTGGGCGTTTaGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGAGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: PAFVGYLSLVRMVGV*PVNVTVTGTVPSWS
Trigger: GCTCCAGCTCGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCACTAAGCTCAAATAACCCACAAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGTGGGCGTTTTGCCTGTaGATGTCACTGTCACAGGCA +
Preference number: 2 (lower is better)
Translates to: FRRLSCLCVCEREREGGRWAFCL*MSLSQA
Trigger: TGCCTGTGACAGTGACATTCACAGGCAAAACGCCCA...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR GCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGTCCACGCTGCCAGGTTaGACCCATGATTTGCATATC +
Preference number: 2 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPSTLPG*THDLHI
Trigger: GATATGCAAATCATGGGTGCAACCTGGCAGCGTGGA...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CCA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGTTCGTAATGTCTGGGTaGAATAAGGGTGACACACGT +
Preference number: 2 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVFVMSG*NKGDTR
Trigger: ACGTGTGTCACCCTTATTCCACCCAGACATTACGAA...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTTGGGCGTTTTGCCTGTaGATGTCACTGTCACAGGCA +
Preference number: 2 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSWAFCL*MSLSQA
Trigger: TGCCTGTGACAGTGACATTCACAGGCAAAACGCCCA...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATAGCCAGGTTGCACCCATaGTTTGCATATCCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: QTTGITWWFSTCGGPQEIARLHP*FAYPAF
Trigger: AAAAGCAGGATATGCAAATCATGGGTGCAACCTGGC...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTATCAAAACCCCTGCCATaGGCTGTCTCTGAGAGGTGT +
Preference number: 2 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLSKPLP*AVSERC
Trigger: ACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGA...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTACAAGAGCATGAGCTTTaGGGTAGGATTGTCGGGCCT +
Preference number: 2 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLQEHEL*GRIVGP
Trigger: AGGCCCGACAATCCTACCTCAAAGCTCATGCTCTTG...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGACAACTTGTGCTCCAATaGTGGGCGATTCTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: PFTLQRPLETKEASCEMRQLVLQ*WAILLQ
Trigger: CTGCAGAAGAATCGCCCATCATTGGAGCACAAGTTG...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp ATCCTGCATTGGGTCTGCAAGTGGCAGGTGCTACTAAAGACTCTAGGACCAAGACGTGGACCCATTCCCTaGGTCCCCAAGAAAATGTGT +
Preference number: 2 (lower is better)
Translates to: ILHWVCKWQVLLKTLGPRRGPIP*VPKKMC
Trigger: ACACATTTTCTTGGGGACGCAGGGAATGGGTCCACG...TCTTGGTCCTAGAGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR GCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAACAAACCCATTCACACTaGAGAGACCCCTCGAAACAA +
Preference number: 2 (lower is better)
Translates to: IARAGEAPAVPAVISHLKQTHSH*RDPSKQ
Trigger: TTGTTTCGAGGGGTCTCTGCAGTGTGAATGGGTTTG...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCTTTCAGTTAACTTCTTaGGCTGCCAGTTTCAGAAAG +
Preference number: 2 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTAFQLTS*AASFRK
Trigger: CTTTCTGAAACTGGCAGCCCAAGAAGTTAACTGAAA...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTGCCAGGTTGCACCCATaGTTTGCATATCCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: VDPFPASPRKCVSMTLHAARLHP*FAYPAF
Trigger: AAAAGCAGGATATGCAAATCATGGGTGCAACCTGGC...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGGTTCTAACACTTCAGTaGGAGAGGCAAAAGTCAAGC +
Preference number: 2 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPVLTLQ*ERQKSS
Trigger: GCTTGACTTTTGCCTCTCTCACTGAAGTGTTAGAAC...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAAGAATTCGATGGTGGATaGGAATTCCATGACCTGTCT +
Preference number: 2 (lower is better)
Translates to: IARAGEAPAVPAVISHLKEFDGG*EFHDLS
Trigger: AGACAGGTCATGGAATTCTCATCCACCATCGAATTC...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTACAAATGTGCCACCATaGTGTAACGTGTTATGGAAT +
Preference number: 2 (lower is better)
Translates to: LCSLREERWIRTRLPWRSTNVPP*CNVLWN
Trigger: ATTCCATAACACGTTACATCATGGTGGCACATTTGT...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATAAAAGATCCTGCATTCTaGTCCTTTCCTGAGAGTGCT +
Preference number: 2 (lower is better)
Translates to: QTTGITWWFSTCGGPQEIKDPAF*SFPESA
Trigger: AGCACTCTCAGGAAAGGATCAGAATGCAGGATCTTT...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGCCTTTCTATCAATCCTaGATTGGGTCTGCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: RPATGATCVHDAFIMTIGPFYQS*IGSASG
Trigger: GCCACTTGCAGACCCAATGCAGGATTGATAGAAAGG...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CAA 90 bp CATGATGACCCACTAGCCCAACCAGCCTTCAAAACTTCGGCTCAGTaGCATCTCTTCGTGCTATCCACACTGGATTTCAAACCCATTCAC +
Preference number: 2 (lower is better)
Translates to: HDDPLAQPAFKTSAQ*HLFVLSTLDFKPIH
Trigger: GTGAATGGGTTTGAAATCCAGTGTGGATAGCACGAAGAGATGCAACTGAGCCGAAGTTTTGAAGGCTGGTTGGGCTAGTGGGTCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGATGCTATGTATGCAGTaGGGTGCTAGTGGATATTTT +
Preference number: 2 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMMLCMQ*GASGYF
Trigger: AAAATATCCACTAGCACCTCACTGCATACATAGCAT...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTGTTGCACCCATGATTTaGATATCCTGCTTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: VDPFPASPRKCVSMTLHAVAPMI*ISCFCG
Trigger: CCCACAAAAGCAGGATATGCAAATCATGGGTGCAAC...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR GCA 90 bp ATCCTGCATTGGGTCTGCAAGTGGCAGGTGCTACTAAAGACTCTAGGACCAAGAAGCATGATGAGAATCTaGAATCTCGGGACTCTGAGG +
Preference number: 2 (lower is better)
Translates to: ILHWVCKWQVLLKTLGPRSMMRI*NLGTLR
Trigger: CCTCAGAGTCCCGAGATTGCAGATTCTCATCATGCT...TCTTGGTCCTAGAGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR GCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACACCTTTCTATCAATCCTaGATTGGGTCTGCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTPFYQS*IGSASG
Trigger: GCCACTTGCAGACCCAATGCAGGATTGATAGAAAGG...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACAGTTAACTTCTTGGGCTaGCAGTTTCAGAAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTVNFLG*QFQKGA
Trigger: GGCTCCTTTCTGAAACTGGCAGCCCAAGAAGTTAAC...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAAAGTTGCATCTCTTCGTaGTATCCACACTGGATTTCA +
Preference number: 2 (lower is better)
Translates to: IARAGEAPAVPAVISHLKSCISS*YPHWIS
Trigger: TGAAATCCAGTGTGGATAGCACGAAGAGATGCAACT...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTTCGTAATGTCTGGGTaGAATAAGGGTGACACACGT +
Preference number: 2 (lower is better)
Translates to: RPATGATCVHDAFIMTIGFVMSG*NKGDTR
Trigger: ACGTGTGTCACCCTTATTCCACCCAGACATTACGAA...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACACATTGGGTCTGCAAGTaGCAGGTGCTACTAAAGACT +
Preference number: 2 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTHWVCK*QVLLKT
Trigger: AGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATG...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 90 bp TTAATACAACAGCTTAGTGCCAACGCAGCAATCCTACATCATGCATaGAATGTTTTCTGCTTTGCCCGCTCCCCACTTCTTCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: LIQQLSANAAILHHA*NVFCFARSPLLLGA
Trigger: GGCACCCAGAAGAAGTGGGGAGCGGGCAAAGCAGAAAACATTCAATGCATGATGTAGGATTGCTGCGTTGGCACTAAGCTGTTGTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAAACAGGTTTGAGTCACTaGATGGGAATCATTAGCTTA +
Preference number: 2 (lower is better)
Translates to: IARAGEAPAVPAVISHLKTGLSH*MGIISL
Trigger: TAAGCTAATGATTCCCATTCAGTGACTCAAACCTGT...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAAGAGAACACAATTGGCTaGTTAATAAAGGAAGCCATT +
Preference number: 2 (lower is better)
Translates to: IARAGEAPAVPAVISHLKENTIG*LIKEAI
Trigger: AATGGCTTCCTTTATTAATCAGCCAATTGTGTTCTC...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGGAGAAAGGTCCTTCTTaGGGAGTGTTCGTAATGTCT +
Preference number: 2 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWEKGPS*GVFVMS
Trigger: AGACATTACGAACACTCCCCAAGAAGGACCTTTCTC...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGGTGGATGAATCAATGTaGATCTCAAGGGAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWVDESM*ISREKP
Trigger: AGGCTTCTCCCTTGAGATCCACATTGATTCATCCAC...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGAGGGAATGGAAACATATaGGGTGTTACTTTCTATGGT +
Preference number: 2 (lower is better)
Translates to: PFTLQRPLETKEASCEMRGNGNI*GVTFYG
Trigger: ACCATAGAAAGTAACACCCCATATGTTTCCATTCCC...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 90 bp ACTATTAAAGCCAGGTTAAAAGAGGGAAGTAACCGAGGGCTGAACTaGGTGTCTGATCAATACATCCTGCCCGAAACCTGCCCTCATATT +
Preference number: 2 (lower is better)
Translates to: TIKARLKEGSNRGLN*VSDQYILPETCPHI
Trigger: AATATGAGGGCAGGTTTCGGGCAGGATGTATTGATCAGACACCAAGTTCAGCCCTCGGTTACTTCCCTCTTTTAACCTGGCTTTAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACTTTAGGAGACTGTCATaGCTGTGTGTGTGTGAGAGA +
Preference number: 2 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDFRRLS*LCVCER
Trigger: TCTCTCACACACACACAGGCATGACAGTCTCCTAAA...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR GCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGCTAGCAAAGAACAACTaGAGAACCACATTACAGAGG +
Preference number: 2 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWLAKNN*RTTLQR
Trigger: CCTCTGTAATGTGGTTCTGCAGTTGTTCTTTGCTAG...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGGATCCTTTGATCTTCTaGGAGGAACTGCCAAAGAAT +
Preference number: 2 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWDPLIF*EELPKN
Trigger: ATTCTTTGGCAGTTCCTCCCAGAAGATCAAAGGATC...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGTTGAAGTCAGAACATTaGAGGTGTTTTGTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWLKSEH*RCFVLK
Trigger: CTTCAGCACAAAACACCTTCAATGTTCTGACTTCAA...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACGGCAAAAGTCAAGCATaGATGATTAATGTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDGKSQA*MINVPF
Trigger: GAAAGGGACATTAATCATTCATGCTTGACTTTTGCC...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CAA 90 bp GACTTCTGTCGACGGTCAAAACAAGGACGCGAAGCTTTTTGTTTCTaGTTAAATCCCTTTGCCAACGTTAAACAAACACCTCTCATGCTT +
Preference number: 2 (lower is better)
Translates to: DFCRRSKQGREAFCF*LNPFANVKQTPLML
Trigger: AAGCATGAGAGGTGTTTGTTTAACGTTGGCAAAGGGATTTAACAAGAAACAAAAAGCTTCGCGTCCTTGTTTTGACCGTCGACAGAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR TCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACGAGAACACAATTGGCTaGTTAATAAAGGAAGCCATT +
Preference number: 2 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDENTIG*LIKEAI
Trigger: AATGGCTTCCTTTATTAATCAGCCAATTGTGTTCTC...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR TCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAAGACAATAGGGTGGACTaGCTAGAACAGGCTTTCCCA +
Preference number: 2 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKDNRVD*LEQAFP
Trigger: TGGGAAAGCCTGTTCTAGTCAGTCCACCCTATTGTC...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAACTATCAATCCTGCATTaGGTCTGCAAGTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKLSILH*VCKWQV
Trigger: CACCTGCCACTTGCAGACCCAATGCAGGATTGATAG...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAACTCACAGTGGGAAGCTaGGAGACAAGGTACCTGATA +
Preference number: 2 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKLTVGS*ETRYLI
Trigger: TATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAG...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CAA 90 bp TCATATTTTTACAGCCTAGATATTAGGTTAAAGCTGCAGGATCCTTaGATCTTCTGGGAGGAACTGCCAAAGAATGTGGTCAACAAACAC +
Preference number: 2 (lower is better)
Translates to: SYFYSLDIRLKLQDP*IFWEELPKNVVNKH
Trigger: GTGTTTGTTGACCACATTCTTTGGCAGTTCCTCCCAGAAGATCAAAGGATCCTGCAGCTTTAACCTAATATCTAGGCTGTAAAAATATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR GCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAAGTTGCACCCATGATTTaGATATCCTGCTTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKVAPMI*ISCFCG
Trigger: CCCACAAAAGCAGGATATGCAAATCATGGGTGCAAC...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CAA 90 bp CAGCCTGGAAATATATACAGTTTTATAGTGTTTAGGTCAGTTACCTaGTGGGTCAGTATTACTGGTGTCCTCTTTAATTGGAATCATTAT +
Preference number: 2 (lower is better)
Translates to: QPGNIYSFIVFRSVT*WVSITGVLFNWNHY
Trigger: ATAATGATTCCAATTAAAGAGGACACCAGTAATACTGACCCACAAGGTAACTGACCTAAACACTATAAAACTGTATATATTTCCAGGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp TGGCCTCTCCTCAGAGCTTTACCCGAGGGCCTGGCCTaGTCTGCAGTGCCCGCATCACCGGCCCACAGGTCC +
Preference number: 3 (lower is better)
Translates to: WPLLRALPEGLA*SAVPASPAHRS
Trigger: GGACCTGTGGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGAGGAGAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp CGCAGCAGAGACTGCAACACAGCACCGAGCAGCTCCTaGAGACGGGGCAGCTGGCCTTGCCGGCCACATCTG +
Preference number: 3 (lower is better)
Translates to: RSRDCNTAPSSS*RRGSWPCRPHL
Trigger: CAGATGTGGCCGGCAAGGCCAGCTGCCCCGTCTCCAGGAGCTGCTCGGTGCTGTGTTGCAGTCTCTGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 72 bp CTTCTATTTCCTGCCTTCCCCAGAGATCCCGCCCACTaGATCAGGGCAGAGCCGTCCCGGCCTGCCACAGGG +
Preference number: 3 (lower is better)
Translates to: LLFPAFPRDPAH*IRAEPSRPATG
Trigger: CCCTGTGGCAGGCCGGGACGGCTCTGCCCTGATGCAGTGGGCGGGATCTCTGGGGAAGGCAGGAAATAGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 72 bp CCTGGAGACGGGGCAGCTGGCCTTGCCGGCCACATCTaGAGAGACAGCGGACCAAGCAGCCTTGCAGACCAA +
Preference number: 3 (lower is better)
Translates to: PGDGAAGLAGHI*RDSGPSSLADQ
Trigger: TTGGTCTGCAAGGCTGCTTGGTCCGCTGTCTCTGCAGATGTGGCCGGCAAGGCCAGCTGCCCCGTCTCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp GGTTTTGGCCTCTCCTCAGAGCTTTACCCGAGGGCCTaGCCTGGTCTGCAGTGCCCGCATCACCGGCCCACA +
Preference number: 3 (lower is better)
Translates to: GFGLSSELYPRA*PGLQCPHHRPT
Trigger: TGTGGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGAGGAGAGGCCAAAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 72 bp AGCAGCCTCCTTGACACTGAACCACCTGCCCACCGGTaGCGAAACCCGCCTTCCCAGGGGGACCAAGCCTTT +
Preference number: 3 (lower is better)
Translates to: SSLLDTEPPAHR*RNPPSQGDQAF
Trigger: AAAGGCTTGGTCCCCCTGGGAAGGCGGGTTTCGGCACCGGTGGGCAGGTGGTTCAGTGTCAAGGAGGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp GCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTaGCTGCCGCTCTCAGGAGGCCAGTCTCAAAGTCTA +
Preference number: 3 (lower is better)
Translates to: ANTRGVGLQRSS*LPLSGGQSQSL
Trigger: TAGACTTTGAGACTGGCCTCCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR TCA 72 bp GCCAGGGCCTCCCCCAACCTGCATAGCTCGTGCTGGTaGAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCT +
Preference number: 3 (lower is better)
Translates to: ARASPNLHSSCW*SPSSPSGYQSS
Trigger: AGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTATGCAGGTTGGGGGAGGCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTAGAATGGTGGGCGTTTaGCCTGTGAATGTCACTGTC +
Preference number: 3 (lower is better)
Translates to: TEGQHPGRGITAQLLTAARMVGV*PVNVTV
Trigger: GACAGTGACATTCACAGGCAAAACGCCCACCATTCT...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 72 bp ACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTaGCGCTCTCAGGAGGCCAGTCTCAAAGTCTACCTT +
Preference number: 3 (lower is better)
Translates to: TPGAWDYSAAPD*RSQEASLKVYL
Trigger: AAGGTAGACTTTGAGACTGGCCTCCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 72 bp ACCGGCCCACAGGTCCCTAGGCCTTTCCCAGGACTGTaGTCCTTGAGAGAAGAGCGATGGATCCGGACGAGA +
Preference number: 3 (lower is better)
Translates to: TGPQVPRPFPGL*SLREERWIRTR
Trigger: TCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAGTCCTGGGAAAGGCCTAGGGACCTGTGGGCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp GCAAGCAGTCACCTTCCCGAACCTGAAGCCTGGTTTTaGCCTCTCCTCAGAGCTTTACCCGAGGGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: ASSHLPEPEAWF*PLLRALPEGLA
Trigger: GGCCAGGCCCTCGGGTAAAGCTCTGAGGAGAGGCCAAAACCAGGCTTCAGGTTCGGGAAGGTGACTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp TCCAGGGCTAGGAGGAGTTGGAGAGGCTTCCCCGGCTaGGTCTCACCCAGTAAGCACCTGACATGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: SRARRSWRGFPG*VSPSKHLTCSC
Trigger: GCAGGAACATGTCAGGTGCTTACTGGGTGAGACCCAGCCGGGGAAGCCTCTCCAACTCCTCCTAGCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCGCACCTAGGGCGCTGTaGCAACTACAAAGTACATAT +
Preference number: 3 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPAPRAL*QLQSTY
Trigger: ATATGTACTTTGTAGTTGCAACAGCGCCCTAGGTGC...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp GGACCAAGCAGCCTTGCAGACCAAGAGCATGAGCTTTaGGGTAGGATTGTCGGGCCTGCTGAGTGGAGGGGG +
Preference number: 3 (lower is better)
Translates to: GPSSLADQEHEL*GRIVGPAEWRG
Trigger: CCCCCTCCACTCAGCAGGCCCGACAATCCTACCTCAAAGCTCATGCTCTTGGTCTGCAAGGCTGCTTGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 72 bp GGATCTCAAGGGAGAAGCCTGGTGTTTCCAGAGTCCTaGCCTGGCAGGTCAGACTCGGCACACCCAGTCTCA +
Preference number: 3 (lower is better)
Translates to: GSQGRSLVFPES*PGRSDSAHPVS
Trigger: TGAGACTGGGTGTGCCGAGTCTGACCTGCCAGGGCAGGACTCTGGAAACACCAGGCTTCTCCCTTGAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 72 bp AGGCAGCTCCTTGCCCTGGTCACAAGGAGGCTTGGATaGAAGACACTGGTCAGAGAACACTGGAACGCCCCC +
Preference number: 3 (lower is better)
Translates to: RQLLALVTRRLG*KTLVREHWNAP
Trigger: GGGGGCGTTCCAGTGTTCTCTGACCAGTGTCTTCCATCCAAGCCTCCTTGTGACCAGGGCAAGGAGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp CCGGCAGGCAGTTACTCAGAAAGCAGGCGCGGTGTCTaGACAGGAAGGCAGAACCAAGGACGCACAGTTGGT +
Preference number: 3 (lower is better)
Translates to: PAGSYSESRRGV*TGRQNQGRTVG
Trigger: ACCAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTGAGTAACTGCCTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp GCTGGATGCTGTCCCTGGCATCGGCCGTATTGCTTCTaGGCTCCTGGAGGAGTCAGAAAAGGGAGAATCCCA +
Preference number: 3 (lower is better)
Translates to: AGCCPWHRPYCF*APGGVRKGRIP
Trigger: TGGGATTCTCCCTTTTCTGACTCCTCCAGGAGCCCAGAAGCAATACGGCCGATGCCAGGGACAGCATCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp GCTCAATCCGGAAAGCACCACCCTCCTCAAACTTGGTaGGCCATAGGGCACCTAGGGCGCTGTTGCAACTAC +
Preference number: 3 (lower is better)
Translates to: AQSGKHHPPQTW*AIGHLGRCCNY
Trigger: GTAGTTGCAACAGCGCCCTAGGTGCCCTATGGCCCACCAAGTTTGAGGAGGGTGGTGCTTTCCGGATTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp GCAGTTGCAAGCAGTCACCTTCCCGAACCTGAAGCCTaGTTTTGGCCTCTCCTCAGAGCTTTACCCGAGGGC +
Preference number: 3 (lower is better)
Translates to: AVASSHLPEPEA*FWPLLRALPEG
Trigger: GCCCTCGGGTAAAGCTCTGAGGAGAGGCCAAAACCAGGCTTCAGGTTCGGGAAGGTGACTGCTTGCAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGGTAGCCCCAGGCAACTaGTGCTCCAATGATGGGCGA +
Preference number: 3 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMVAPGN*CSNDGR
Trigger: TCGCCCATCATTGGAGCACAAGTTGCCTGGGGCTAC...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp GGCATACAGAACCTATCGCAAAATGTCAGTAGAGGTTaGGAAACCCTGGCGCCACCCCACGGGCTGTGCAGC +
Preference number: 3 (lower is better)
Translates to: GIQNLSQNVSRG*ETLAPPHGLCS
Trigger: GCTGCACAGCCCGTGGGGTGGCGCCAGGGTTTCTCAACCTCTACTGACATTTTGCGATAGGTTCTGTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACACTGGCATCGGCCGTATaGCTTCTGGGCTCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTLASAV*LLGSWR
Trigger: CCTCCAGGAGCCCAGAAGCAATACGGCCGATGCCAG...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp GGAAGTGGGGAGCGGGCAGGGGGCATCTTCAGTGAGTaGAAATTCAAGACCCAACAGGTTGGCATCTGTTGG +
Preference number: 3 (lower is better)
Translates to: GSGERAGGIFSE*KFKTQQVGICW
Trigger: CCAACAGATGCCAACCTGTTGGGTCTTGAATTTTCACTCACTGAAGATGCCCCCTGCCCGCTCCCCACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 72 bp GTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCTaGGTCCCCAAGAAAATGTGTTTCTATGACACTCCA +
Preference number: 3 (lower is better)
Translates to: VAAVSMARGPIP*VPKKMCFYDTP
Trigger: TGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGCTCACAGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 72 bp AAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATaGATGACAAACCACTGGCATAACCTGGTGGTTCTC +
Preference number: 3 (lower is better)
Translates to: KQPERHSPSTDP*MTNHWHNLVVL
Trigger: GAGAACCACCAGGTTATGCCAGTGGTTTGTCATGCATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp TTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTaGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTT +
Preference number: 3 (lower is better)
Translates to: FATDSGSCEHGP*THSLRPQENVF
Trigger: AAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 72 bp TATTTTACCCACTGGAGGCCAGGCAGCTCCTTGCCCTaGTCACAAGGAGGCTTGGATGGAAGACACTGGTCA +
Preference number: 3 (lower is better)
Translates to: YFTHWRPGSSLP*SQGGLDGRHWS
Trigger: TGACCAGTGTCTTCCATCCAAGCCTCCTTGTGACCAGGGCAAGGAGCTGCCTGGCCTCCAGTGGGTAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp AGCCGGAGCGCCACAGTCCCTCTACAGATCCATGCATaGCAAACCACTGGCATAACCTGGTGGTTCTCAACT +
Preference number: 3 (lower is better)
Translates to: SRSATVPLQIHA*QTTGITWWFST
Trigger: AGTTGAGAACCACCAGGTTATGCCAGTGGTTTGTCATGCATGGATCTGTAGAGGGACTGTGGCGCTCCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGAGAATGGTGGGCGTTTaGCCTGTGAATGTCACTGTC +
Preference number: 3 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMRMVGV*PVNVTV
Trigger: GACAGTGACATTCACAGGCAAAACGCCCACCATTCT...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCGCTTTTGTGGGTTATTaGAGCTTAGTGAGAATGGTG +
Preference number: 3 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPAFVGY*SLVRMV
Trigger: CACCATTCTCACTAAGCTCAAATAACCCACAAAAGC...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CAA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGACACACGTACCTTCCTTaGCCACTGACAGTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: PFTLQRPLETKEASCEMRHTYLP*PLTVAA
Trigger: AGCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTG...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGCGAATGCTGACTCCCTaGAGAAAGGTCCTTCTTGGG +
Preference number: 3 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPRMLTP*RKVLLG
Trigger: CCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCG...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CAA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGATCCAGTCCAGCAAATaGACAAGTCACTTCTCAGCC +
Preference number: 3 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLIQSSK*TSHFSA
Trigger: GGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGAT...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp CACAGTCCCTCTACAGATCCATGCATGACAAACCACTaGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: HSPSTDPCMTNH*HNLVVLNLWRP
Trigger: GGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTGTCATGCATGGATCTGTAGAGGGACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCGCTTTTGTGGGTTATTaGAGCTTAGTGAGAATGGTG +
Preference number: 3 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTAAFVGY*SLVRMV
Trigger: CACCATTCTCACTAAGCTCAAATAACCCACAAAAGC...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CAA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTCTATCAATCCTGCATaGGGTCTGCAAGTGGCAGGT +
Preference number: 3 (lower is better)
Translates to: RPATGATCVHDAFIMTIGSINPA*GLQVAG
Trigger: ACCTGCCACTTGCAGACCCAATGCAGGATTGATAGA...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR TCA 72 bp ACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATaGCACTCCACGCTGCCAGGTTGCACCCATGATTTG +
Preference number: 3 (lower is better)
Translates to: THSLRPQENVFL*HSTLPGCTHDL
Trigger: CAAATCATGGGTGCAACCTGGCAGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR TCA 72 bp AGACTTCCCTGGAGGTCTCAACTCCCAGCTCCTGACTaGTGTCAACGTCAATCATTGAAAAAGCCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: RLPWRSQLPAPD*CQRQSLKKPGP
Trigger: AGGCCCTGGCTTTTTCAATGATTGACGTTGACATCAGTCAGGAGCTGGGAGTTGAGACCTCCAGGGAAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 72 bp CGTGCTATCCACACTGGATTTCAAACCCATTCACACTaGAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTG +
Preference number: 3 (lower is better)
Translates to: RAIHTGFQTHSH*RDPSKQRRQAV
Trigger: CACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGGGTTTGAAATCCAGTGTGGATAGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp AGCCCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTaGGGAGTGTTCGTAATGTCTGGGTGGAATAAGGGT +
Preference number: 3 (lower is better)
Translates to: SPNADSLEKGPS*GVFVMSGWNKG
Trigger: ACCCTTATTCCACCCAGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 72 bp CTTCGGCTCAGTTGCATCTCTTCGTGCTATCCACACTaGATTTCAAACCCATTCACACTGCAGAGACCCCTC +
Preference number: 3 (lower is better)
Translates to: LRLSCISSCYPH*ISNPFTLQRPL
Trigger: GAGGGGTCTCTGCAGTGTGAATGGGTTTGAAATCCAGTGTGGATAGCACGAAGAGATGCAACTGAGCCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp CCGCCTTCCCAGGGGGACCAAGCCTTTCGCTTGCAATaGGAATTAAGGCTTAAATGCAAATATCCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: PPSQGDQAFRLQ*ELRLKCKYPWK
Trigger: CTTCCAGGGATATTTGCATTTAAGCCTTAATTCTCATTGCAAGCGAAAGGCTTGGTCCCCCTGGGAAGGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp GTTGTCACACCTAACTTGGGGGTTGCTACTGGCAGATaGTGGGTAGAGACCAGGGATGTTGCTAAACATCCT +
Preference number: 3 (lower is better)
Translates to: VVTPNLGVATGR*WVETRDVAKHP
Trigger: AGGATGTTTAGCAACATCCCTGGTCTCTACCCATCATCTGCCAGTAGCAACCCCCAAGTTAGGTGTGACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp AAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTGGGTaGAATAAGGGTGACACACGTACCTTCCTTTGCCAC +
Preference number: 3 (lower is better)
Translates to: KGPSWGVFVMSG*NKGDTRTFLCH
Trigger: GTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCCCCAAGAAGGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CAA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCGGTTGCACCCATGATTaGCATATCCTGCTTTTGTGG +
Preference number: 3 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCGCTHD*HILLLW
Trigger: CCACAAAAGCAGGATATGCAAATCATGGGTGCAACC...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 72 bp TTTCAGTGGAACATCCACAGCAATAGGACCAAGAGCTaGCACCAAATACCAACAACGAGTGACCGAAAGTGG +
Preference number: 3 (lower is better)
Translates to: FQWNIHSNRTKS*HQIPTTSDRKW
Trigger: CCACTTTCGGTCACTCGTTGTTGGTATTTGGTGGCAGCTCTTGGTCCTATTGCTGTGGATGTTCCACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp TGTCCCTTTCTATCAATCCTGCATTGGGTCTGCAAGTaGCAGGTGCTACTAAAGACTCTAGGACCAAGAAGC +
Preference number: 3 (lower is better)
Translates to: CPFLSILHWVCK*QVLLKTLGPRS
Trigger: GCTTCTTGGTCCTAGAGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATGCAGGATTGATAGAAAGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 72 bp GCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATaGGGTGTTACTTTCTATGGTCATAGGAAACCTGTC +
Preference number: 3 (lower is better)
Translates to: AIQTGLAGNGNI*GVTFYGHRKPV
Trigger: GACAGGTTTCCTATGACCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGATGTCGACAGATACTTTaGGTTGTCACACCTAACTTG +
Preference number: 3 (lower is better)
Translates to: PFTLQRPLETKEASCEMRCRQIL*VVTPNL
Trigger: CAAGTTAGGTGTGACAACCAAAAGTATCTGTCGACA...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACATTTAGGTCAGTTACCTaGTGGGTCAGTATTACTGGT +
Preference number: 3 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTFRSVT*WVSITG
Trigger: ACCAGTAATACTGACCCACAAGGTAACTGACCTAAA...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp AGGAAGGCAGAACCAAGGACGCACAGTTGGTGCTGGTaGATGGGCGAATTTTATAAAAATCCAGTCCAGCAA +
Preference number: 3 (lower is better)
Translates to: RKAEPRTHSWCW*MGEFYKNPVQQ
Trigger: TTGCTGGACTGGATTTTTATAAAATTCGCCCATTCACCAGCACCAACTGTGCGTCCTTGGTTCTGCCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 72 bp CCACGCTGCCAGGTTGCACCCATGATTTGCATATCCTaGTTTTGTGGGTTATTTGAGCTTAGTGAGAATGGT +
Preference number: 3 (lower is better)
Translates to: PRCQVAPMICIS*FCGLFELSENG
Trigger: ACCATTCTCACTAAGCTCAAATAACCCACAAAAGCAGGATATGCAAATCATGGGTGCAACCTGGCAGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 72 bp GTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTaGCAGGTTGCACCCATGATTTGCATATCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: VPKKMCFYDTPR*QVAPMICISCF
Trigger: AAAGCAGGATATGCAAATCATGGGTGCAACCTGGCAGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 72 bp AAGCTAAAAGATAACTTTCTCAGCATGATGAGAATCTaGAATCTCGGGACTCTGAGGAGGCAAGGTCCCCAC +
Preference number: 3 (lower is better)
Translates to: KLKDNFLSMMRI*NLGTLRRQGPH
Trigger: GTGGGGACCTTGCCTCCTCAGAGTCCCGAGATTGCAGATTCTCATCATGCTGAGAAAGTTATCTTTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 72 bp CAGCCTTCAAAACTTCGGCTCAGTTGCATCTCTTCGTaGTATCCACACTGGATTTCAAACCCATTCACACTG +
Preference number: 3 (lower is better)
Translates to: QPSKLRLSCISS*YPHWISNPFTL
Trigger: CAGTGTGAATGGGTTTGAAATCCAGTGTGGATAGCACGAAGAGATGCAACTGAGCCGAAGTTTTGAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTATTTTCAGTTAACTTCTaGGGCTGCCAGTTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLFSVNF*GCQFQK
Trigger: TTTCTGAAACTGGCAGCCCAAGAAGTTAACTGAAAA...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp ACGTGTTATGGAATTCGATGGTGGATGAGAATTCCATaGCCTGTCTGTCATTTCTACTCTGAAACCCGGGAC +
Preference number: 3 (lower is better)
Translates to: TCYGIRWWMRIP*PVCHFYSETRD
Trigger: GTCCCGGGTTTCAGAGTAGAAATGACAGACAGGTCATGGAATTCTCATCCACCATCGAATTCCATAACACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR GCA 72 bp TATGACACTCCACGCTGCCAGGTTGCACCCATGATTTaGATATCCTGCTTTTGTGGGTTATTTGAGCTTAGT +
Preference number: 3 (lower is better)
Translates to: YDTPRCQVAPMI*ISCFCGLFELS
Trigger: ACTAAGCTCAAATAACCCACAAAAGCAGGATATGCAAATCATGGGTGCAACCTGGCAGCGTGGAGTGTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 72 bp ATGAGTCTGAGAGTGGTTCAGCTCAGAAGAGCAATCTaGATGCATTTTCAGTTAACTTCTTGGGCTGCCAGT +
Preference number: 3 (lower is better)
Translates to: MSLRVVQLRRAI*MHFQLTSWAAS
Trigger: ACTGGCAGCCCAAGAAGTTAACTGAAAATGCATCCAGATTGCTCTTCTGAGCTGAACCACTCTCAGACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 72 bp TTCTTTTTAAAAGGAGAGAGAAATGTTACTACCAGGTaGAGCTGGAGGTGGCAGGTGACTGGGAAGATGAGA +
Preference number: 3 (lower is better)
Translates to: FFLKGERNVTTR*SWRWQVTGKMR
Trigger: TCTCATCTTCCCAGTCACCTGCCACCTCCAGCTCCACCTGGTAGTAACATTTCTCTCTCCTTTTAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 72 bp ATGGAAAATCCTGGGCTTGGGTATCAAGATAAAGGCTaGCAGCTTTGTCACATACAGGCTTTCTATGGAACA +
Preference number: 3 (lower is better)
Translates to: MENPGLGYQDKG*QLCHIQAFYGT
Trigger: TGTTCCATAGAAAGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR-3UTR CAA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAACACACGTACCTTCCTTaGCCACTGACAGTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKHTYLP*PLTVAA
Trigger: AGCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTG...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR-3UTR CAA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACTTTTCAGTTAACTTCTaGGGCTGCCAGTTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDFSVNF*GCQFQK
Trigger: TTTCTGAAACTGGCAGCCCAAGAAGTTAACTGAAAA...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR GCA 72 bp CACTTTGACCAAGCTTGCTCACTAGCAAAGAACAACTaGAGAACCACATTACAGAGGCACTATTTACAATGC +
Preference number: 3 (lower is better)
Translates to: HFDQACSLAKNN*RTTLQRHYLQC
Trigger: GCATTGTAAATAGTGCCTCTGTAATGTGGTTCTGCAGTTGTTCTTTGCTAGTGAGCAAGCTTGGTCAAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CCA 72 bp GATATTAGGTTAAAGCTGCAGGATCCTTTGATCTTCTaGGAGGAACTGCCAAAGAATGTGGTCAACAAACAC +
Preference number: 3 (lower is better)
Translates to: DIRLKLQDPLIF*EELPKNVVNKH
Trigger: GTGTTTGTTGACCACATTCTTTGGCAGTTCCTCCCAGAAGATCAAAGGATCCTGCAGCTTTAACCTAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp ACAGAAAGGATAAGAGATTGGCCCCCACTCATACCATaGATCACTATTAAAGCCAGGTTAAAAGAGGGAAGT +
Preference number: 3 (lower is better)
Translates to: TERIRDWPPLIP*ITIKARLKEGS
Trigger: ACTTCCCTCTTTTAACCTGGCTTTAATAGTGATTCATGGTATGAGTGGGGGCCAATCTCTTATCCTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp TGCTTTGAATTAGGAGCTGGGATGCTATGTATGCAGTaGGGTGCTAGTGGATATTTTCGGAAGAGATTAATT +
Preference number: 3 (lower is better)
Translates to: CFELGAGMLCMQ*GASGYFRKRLI
Trigger: AATTAATCTCTTCCGAAAATATCCACTAGCACCTCACTGCATACATAGCATCCCAGCTCCTAATTCAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR TCA 72 bp AAGGATGGAGGAAGAGAGAGAGAGAACACAATTGGCTaGTTAATAAAGGAAGCCATTTTAAAAGGTTCTAAC +
Preference number: 3 (lower is better)
Translates to: KDGGRERENTIG*LIKEAILKGSN
Trigger: GTTAGAACCTTTTAAAATGGCTTCCTTTATTAATCAGCCAATTGTGTTCTCTCTCTCTCTTCCTCCATCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CCA 72 bp CAGAACCACATTACAGAGGCACTATTTACAATGCAATaGAACTCGACATTTTTAAACTACTTTGAATTCCTT +
Preference number: 3 (lower is better)
Translates to: QNHITEALFTMQ*NSTFLNYFEFL
Trigger: AAGGAATTCAAAGTAGTTTAAAAATGTCGAGTTCCATTGCATTGTAAATAGTGCCTCTGTAATGTGGTTCTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCCCCGGGAGCCGAAGGTaGGGCTCCAGCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPPGSRR*GSSCLL
Trigger: GAGCAGGCAGCTGGAGCCCCACCTTCGGCTCCCGGG...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTAGCGGCTTCACCTCGTaGTTGGCGTGCCGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAASGFTS*LACRPS
Trigger: GGAGGGCCGGCACGCCAAGCACGAGGTGAAGCCGCT...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTCGGCTGCCCTCGCGGTaGCCTGCGAGGAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAARLPSR*PARSFR
Trigger: CCTAAAGCTCCTCGCAGGCCACCGCGAGGGCAGCCG...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTCTCAGGCCCCAGCTCTCTTGGTaGGCTCCACAGAGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GQHPGRGITAQLLTAALRPQLSW*APQSLP
Trigger: GGGCAGGCTCTGTGGAGCTCACCAAGAGAGCTGGGG...CCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTAAGGCCGCTCAGCCGTaGGGCTGGGATCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAAKAAQP*GWDQHH
Trigger: GTGGTGCTGATCCCAGCCCCACGGCTGAGCGGCCTT...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTGCTTCACCTCGTGCTTaGCGTGCCGGCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAAASPRA*RAGPPP
Trigger: TGGAGGAGGGCCGGCACGCCAAGCACGAGGTGAAGC...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCAGCGGCTGGGGCAGGTaGTGCTCACCGTCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPSGWGR*CSPSGV
Trigger: GACCCCGGACGGTGAGCAGCACCTGCCCCAGCCGCT...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCCCTCGAGCAGCCGGTTaGGCTGGAAGCCGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPPRAAG*AGSRAG
Trigger: GCCTGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGG...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCCCCGGTCGTCATAGCTaGTGCAGGTGGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPPGRHS*CRWLSG
Trigger: ACCAGACAGCCACCTGCAGCAGCTATGACGACCGGG...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTGCTGTGGGGCCCTGCTaGTGCCCGTTGATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAAAVGPC*CPLMKK
Trigger: CTTCTTCATCAACGGGCAGCAGCAGGGCCCCACAGC...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTTCCCCTGTGAGAAGCTaGTGTCACCAGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAASPVRS*CHQAAL
Trigger: CAGGGCTGCCTGGTGACAGCAGCTTCTCACAGGGGA...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCGAAGGGTCCCCGGGATaGATGGCACTTGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPEGSPG*MALELA
Trigger: TGCCAGCTCAAGTGCCATCCATCCCGGGGACCCTTC...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTAGCAGGCGCGGTGTCTaGACAGGAAGGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAASRRGV*TGRQNQ
Trigger: TTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCT...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTCTCAGGAGTTGTGCCTTGTGCTaGTTCCACATGGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GQHPGRGITAQLLTAALRSCALC*FHMAPS
Trigger: GCTGGGGGCCATGTGGAAGCAGCACAAGGCACAACT...CCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGGCCCCGCGGCCCTGCTaGTACCGCTGCACGATGGCC +
Preference number: 4 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVAPRPC*YRCTMA
Trigger: GGCCATCGTGCAGCGGTACCAGCAGGGCCGCGGGGC...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCGCACCGAGCAGCTCCTaGAGACGGGGCAGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPAPSSS*RRGSWP
Trigger: AGGCCAGCTGCCCCGTCTCCAGGAGCTGCTCGGTGC...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCCCACGGGGCTGTGGGTaGAGGGTGGCATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTAPRGCG*RVASSR
Trigger: CCTGGAGGATGCCACCCTTCACCCACAGCCCCGTGG...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTCTCAGGTTTCCACTTCTCTCCTaGCCTGGATGCTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GQHPGRGITAQLLTAALRFPLLS*PGCCSL
Trigger: GAGGGAGCAGCATCCAGGTCAGGAGAGAAGTGGAAA...CCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTCTCAGGTCACCTTCCCGAACCTaGAGCCTGGTTTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GQHPGRGITAQLLTAALRSPSRT*SLVLAS
Trigger: AGAGGCCAAAACCAGGCTTCAGGTTCGGGAAGGTGA...CCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCGACCAGCGGCCGGGCTaGTGTGCGCTCGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTADQRPG*CALAAS
Trigger: TGAAGCAGCGAGCGCACAGCAGCCCGGCCGCTGGTC...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGGCGGTGGTCCAGGGATaGGCTGCGGTGGCACTGCGG +
Preference number: 4 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLAVVQG*AAVALR
Trigger: CCGCAGTGCCACCGCAGCGCATCCCTGGACCACCGC...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGACTCCTGGGCGGCTGTaGACGCCGGCTGACTGCGCC +
Preference number: 4 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLTPGRL*TPADCA
Trigger: GGCGCAGTCAGCCGGCGTCCACAGCCGCCCAGGAGT...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGCGCTCACCCTACTCCTaGGCGGCTGTGGACGCCGGC +
Preference number: 4 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLRSPYS*AAVDAG
Trigger: GCCGGCGTCCACAGCCGCCCAGGAGTAGGGTGAGCG...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTCACCCTCCTCAAACTTaGTGGGCCATAGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAAHPPQT*WAIGHL
Trigger: TAGGTGCCCTATGGCCCACCAAGTTTGAGGAGGGTG...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCCCCGAACCTGAAGCCTaGTTTTGGCCTCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPPEPEA*FWPLLR
Trigger: TCTGAGGAGAGGCCAAAACCAGGCTTCAGGTTCGGG...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGCCCTGCGGCCGGGATTaGCCCGCTTCCCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPPCGRD*PASLVP
Trigger: GGGAACCAGGGAAGCGGGTCAATCCCGGCCGCAGGG...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTCTCAGGAGTTGGGGTCAAATGTaGACCAGGCCACATCGGATG +
Preference number: 4 (lower is better)
Translates to: GQHPGRGITAQLLTAALRSWGQM*TRPHRM
Trigger: CATCCGATGTGGCCTGGTTCACATTTGACCCCAACT...CCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGCCAGCCGCAGCGTCGTaGTCCAGAGAGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: HSHRAPFKQASPGMETYGPAAAS*SREAAA
Trigger: CGCCGCTGCCTCTCTGGAGCACGACGCTGCGGCTGG...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTCGTGGACCCATTCCCTaGGTCCCCAAGAAAATGTGT +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAARGPIP*VPKKMC
Trigger: ACACATTTTCTTGGGGACGCAGGGAATGGGTCCACG...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTCCACCTGCCCACCGGTaGCGAAACCCGCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LCSLREERWIRTRLPWRSPPAHR*RNPPSQ
Trigger: CTGGGAAGGCGGGTTTCGGCACCGGTGGGCAGGTGG...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGAGCCGAGGAGCCGGGTaGTGCGGGCACCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPSRGAG*CGHHGQ
Trigger: CTGCCCATGGTGCCCGCACCACCCGGCTCCTCGGCT...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGCAGAGCGTGGCTGCTaGCTCTGGCGGGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: HSHRAPFKQASPGMETYGAERGC*LWRGAV
Trigger: GACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGC...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCAGGCCTCGCCGGGAATaGAAACATATGGGGTGTTAC +
Preference number: 4 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPRPRRE*KHMGCY
Trigger: GTAACACCCCATATGTTTCCATTCCCGGCGAGGCCT...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCTCCTGCGGCGCCTCTaGCCTTGGGCCGCGCGACGC +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCLLRRL*PWAARR
Trigger: GCGTCGCGCGGCCCAAGGTCAGAGGCGCCGCAGGAG...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTCTCAGGAAAGGAGGCAAGCTGTaGGATGAGAGACCCCTTAGA +
Preference number: 4 (lower is better)
Translates to: GQHPGRGITAQLLTAALRKGGKL*DERPLR
Trigger: TCTAAGGGGTCTCTCATCTCACAGCTTGCCTCCTTT...CCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGCTGCTGTGCGCTCGCTaGTTCAGCCCCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPLLCAR*FSPWLR
Trigger: CCGGAGCCAGGGGCTGAAGCAGCGAGCGCACAGCAG...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATAGGGGTCCTCACCTCCTaGCCGAGGGTCCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: QTTGITWWFSTCGGPQEIGVLTS*PRVPHQ
Trigger: CTGGTGCGGGACCCTCGGGCAGGAGGTGAGGACCCC...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AGACATGAAGCCCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTGGAGGACCAGCGCGGTaGGCCCCGGTGAGACGACGG +
Preference number: 4 (lower is better)
Translates to: RHEARMLTPLRKVLLGECGGPAR*APVRRR
Trigger: CCGTCGTCTCACCGGGGCGCACCGCGCTGGTCCTCC...ACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGGGCTTCATGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCGCCACATCGGATGTCTaGAGGACGACAGTTTTACTG +
Preference number: 4 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPATSDV*RTTVLL
Trigger: CAGTAAAACTGTCGTCCTGCAGACATCCGATGTGGC...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGGTGGTGCGGGCACCATaGGCAGCACGCGAACCCCGT +
Preference number: 4 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMVVRAP*AAREPR
Trigger: ACGGGGTTCGCGTGCTGCCCATGGTGCCCGCACCAC...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGAGCAGCCGGTTGCGCTaGAAGCCGCGCAGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGSSRLR*KPRRPR
Trigger: CCGCGGCCTGCGCGGCTTCCAGCGCAACCGGCTGCT...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAACGCACAGCTGGCAGATaGCCACCGCCGCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IARAGEAPAVPAVISHLKRTAGR*PPPRLQ
Trigger: CTGCAGCCGCGGCGGTGGCCATCTGCCAGCTGTGCG...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGGTGCGGTCGCACAGCTaGCAGATGGCCACCGCCGCG +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPVRSHS*QMATAA
Trigger: CGCGGCGGTGGCCATCTGCCAGCTGTGCGACCGCAC...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAACGTGGCTGCTGGCTCTaGCGGGGTGCGGTCGCACAG +
Preference number: 4 (lower is better)
Translates to: IARAGEAPAVPAVISHLKRGCWL*RGAVAQ
Trigger: CTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACG...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGGCTGTGGACGCCGGCTaGCTGCGCCCTGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGAVDAG*LRPGAF
Trigger: GAAAGCCCCAGGGCGCAGTCAGCCGGCGTCCACAGC...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTGGACCTTCCTGGCCATaGGGAATTGATAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAAGPSWP*GIDKFL
Trigger: AAGGAACTTATCAATTCCTCATGGCCAGGAAGGTCC...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAACCCAGCTGCTGCTCCTaGGGCGCCTCTGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: IARAGEAPAVPAVISHLKPSCCS*GASDLG
Trigger: CCCAAGGTCAGAGGCGCCGCAGGAGCAGCAGCTGGG...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCGCGGCCGGGCTGCTGTaGGCTCGCTGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCAAGLL*ARCFSP
Trigger: GGGGCTGAAGCAGCGAGCGCACAGCAGCCCGGCCGC...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTGGCTGGGGCAGGTGCTaGTCACCGTCCGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHAGWGRC*SPSGVC
Trigger: GCAGACCCCGGACGGTGAGCAGCACCTGCCCCAGCC...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCAGAGCCGTCCCGGCCTaGCACAGGGGCCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSRAVPA*HRGHLC
Trigger: ACACAAGTGGCCCCTGTGGCAGGCCGGGACGGCTCT...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTACATGTTCCTGCTACTaGAGTTGCAAGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAATCSCY*SCKQSP
Trigger: AGGTGACTGCTTGCAACTGCAGTAGCAGGAACATGT...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGCGGCTGACTGCGCCCTaGGGCTTTCTCCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGRLTAP*GFLPAA
Trigger: GGCCGCAGGGAGAAAGCCCCAGGGCGCAGTCAGCCG...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACAGGGTCTGCACCGCGATaGTGCGAGCGCAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTGSAPR*CERKAG
Trigger: GCCTGCCTTGCGCTCGCACCATCGCGGTGCAGACCC...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGCTGAGCTTGTCCGCGTaGTCTCCGCCACCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMLSLSA*SPPPPA
Trigger: TGCGGGAGGTGGCGGAGACCACGCGGACAAGCTCAG...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCAGTAGTGCACGCCCTTaGAGAACGCAGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPSSARP*RTQLCP
Trigger: TGGGCACAGCTGCGTTCTCCAAGGGCGTGCACTACT...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGCCCGAAGGCGGGGTCTaGGTGGTTGTCGTACCGGTC +
Preference number: 4 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMPEGGV*VVVVPV
Trigger: GACCGGTACGACAACCACCCAGACCCCGCCTTCGGG...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGTTCCTGAGAGTGCTGTaGTGGGGCGGAGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPFLRVL*WGGGQG
Trigger: CCCCTGCCCTCCGCCCCACCACAGCACTCTCAGGAA...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCGCCAGCAGGTGGCCATaGGACCAGCAGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSASRWP*DQQQPP
Trigger: AGGAGGCTGCTGCTGGTCCCATGGCCACCTGCTGGC...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCTTGGATGGAAGACACTaGTCAGAGAACACTGGAACG +
Preference number: 4 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPLDGRH*SENTGT
Trigger: CGTTCCAGTGTTCTCTGACCAGTGTCTTCCATCCAA...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCGCTCCCCACTTCTTCTaGGTGCCGAGAAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTAAPHFF*VPRKPG
Trigger: CCCAGGCTTTCTCGGCACCCAGAAGAAGTGGGGAGC...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp CCAGGCTCAATCCGGAAAGCACCACCCTCCTCAAACTaGGTGGGCCATAGGGCACCTAGGGCGCTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: PGSIRKAPPSSN*VGHRAPRALLQ
Trigger: TTGCAACAGCGCCCTAGGTGCCCTATGGCCCACCAAGTTTGAGGAGGGTGGTGCTTTCCGGATTGAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTACCCCGTCCACGTGGCTaGAGGCTGTGGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLPRPRG*RLWGPA
Trigger: AGCAGGGCCCCACAGCCTTCAGCCACGTGGACGGGG...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCGCAATCTCGGGACTCTaGGGAGGCAAGGTCCCCACG +
Preference number: 4 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSAISGL*GGKVPT
Trigger: CGTGGGGACCTTGCCTCCTCAGAGTCCCGAGATTGC...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTGAATTCGATGGTGGATaGGAATTCCATGACCTGTCT +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAAEFDGG*EFHDLS
Trigger: AGACAGGTCATGGAATTCTCATCCACCATCGAATTC...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCATTCTGATCCTTTCCTaGGAGTGCTGTGGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPILILS*ECCGGA
Trigger: CGCCCCACCACAGCACTCTCAGGAAAGGATCAGAAT...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTTTAGCATTCACATGTTaGCTCCCCCTAAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAALAFTC*LPLRID
Trigger: GTCAATCCTTAGGGGGAGTCAACATGTGAATGCTAA...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGTGCTCACAGAGGCCTTaGGGCCTCGCAGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLCSQRP*GLAVRL
Trigger: CAGTCTCACTGCGAGGCCTCAAGGCCTCTGTGAGCA...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ATCCTGCATTGGGTCTGCAAGTGGCAGGTGCTACTAAAGACTCTAGGACCAAGACGAGGAGCCGGGTGGTaGGGGCACCATGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ILHWVCKWQVLLKTLGPRRGAGW*GHHGQH
Trigger: GTGCTGCCCATGGTGCCCGCACCACCCGGCTCCTCG...TCTTGGTCCTAGAGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATGCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGGCGCTGCGGTGGCACTaGGGGCACGTGATGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGALRWH*GHVMEL
Trigger: GAGCTCCATCACGTGCCCGCAGTGCCACCGCAGCGC...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGCCCTGCTGGTACCGCTaGACGATGGCCTCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPPCWYR*TMASSS
Trigger: GCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGG...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTAACGGCCCCGCGGCCCTaGTGGTACCGCTGCACGATG +
Preference number: 4 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLTAPRP*WYRCTM
Trigger: CATCGTGCAGCGGTACCAGCAGGGCCGCGGGGCCGT...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCAAAATGATGTCCCGATaGCCAGAGTTGGGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPKMMSR*PELGSN
Trigger: ATTTGACCCCAACTCTGGGCATCGGGACATCATTTT...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGGTGGGGCCCTGCTGCTaGCCGTTGATGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVVGPCC*PLMKKV
Trigger: CACCTTCTTCATCAACGGGCAGCAGCAGGGCCCCAC...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGTGGAGCGGGGCTAATTaGCTGACAGCTTTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLWSGAN*LTALAA
Trigger: GGCGGCCAAAGCTGTCAGGCAATTAGCCCCGCTCCA...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATATGGCCTGGTCTGCAGTaGCCGCATCACCGGCCCACA +
Preference number: 4 (lower is better)
Translates to: QTTGITWWFSTCGGPQEIWPGLQ*PHHRPT
Trigger: TGTGGGCCGGTGATGCGGGCACTGCAGACCAGGCCA...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTGGGCCTGGCCTGGTCTaGAGTGCCCGCATCACCGGC +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSGPGLV*SARITG
Trigger: GCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCC...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGAGCTCAGCCGTGGGGCTaGGATCAGCACCACGAGGCG +
Preference number: 4 (lower is better)
Translates to: PFTLQRPLETKEASCEMRAQPWG*DQHHEA
Trigger: CGCCTCGTGGTGCTGATCCCAGCCCCACGGCTGAGC...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCGCTGCTTCAGCCCCTaGCTCCGGTGGGCGGCTACC +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCRCFSP*LRWAAT
Trigger: GGTAGCCGCCCACCGGAGCCAGGGGCTGAAGCAGCG...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACAGGTACCGCTGCACGATaGCCTCGAGCAGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTGTAAR*PRAAGC
Trigger: GCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACC...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGACTGCTCGCAGAGCGTaGCTGCTGGCTCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGTARRA*LLALAG
Trigger: CCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGT...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGAAGGCGGGGTCTGGGTaGTTGTCGTACCGGTCCACG +
Preference number: 4 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMKAGSG*LSYRST
Trigger: CGTGGACCGGTACGACAACCACCCAGACCCCGCCTT...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTGCAGCACGCCCACGGTaGCCCCCTTGCACACGCCAC +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSAARPR*PPCTRH
Trigger: GTGGCGTGTGCAAGGGGGCCACCGTGGGCGTGCTGC...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCGGCACAGTGCCGAGCTaGAGCGGGGCTAATTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSGTVPS*SGANCL
Trigger: CAGGCAATTAGCCCCGCTCCAGCTCGGCACTGTGCC...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTGAGAAAGGTCCTTCTTaGGGAGTGTTCGTAATGTCT +
Preference number: 4 (lower is better)
Translates to: TEGQHPGRGITAQLLTAAEKGPS*GVFVMS
Trigger: AGACATTACGAACACTCCCCAAGAAGGACCTTTCTC...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGAGCCCACTCTCATTCTaGGGGCAGGGTGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLSPLSF*GQGVGL
Trigger: CAGGCCTACACCCTGCCCCCAGAATGAGAGTGGGCT...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGGGGAGGAGGGAGTCCTaGCTGCACCTCTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVGRRES*LHLSGL
Trigger: AAGTCCAGAGAGGTGCAGCCAGGACTCCCTCCTCCC...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCCGGCCGTATTGCTTCTaGGCTCCTGGAGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTARPYCF*APGGVR
Trigger: TCTGACTCCTCCAGGAGCCCAGAAGCAATACGGCCG...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCGCTCTGCGCTGGGGATaGATGGCCGGAGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCALRWG*MAGARE
Trigger: CTCCCGAGCTCCGGCCATTCATCCCCAGCGCAGAGC...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGTTGACCCACTGCTCCTaGGACACCTGGACGCGCTTG +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPLTHCS*DTWTRL
Trigger: CAAGCGCGTCCAGGTGTCTCAGGAGCAGTGGGTCAA...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCTGGATGAGAATTCCATaGCCTGTCTGTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPWMRIP*PVCHFY
Trigger: GTAGAAATGACAGACAGGTCATGGAATTCTCATCCA...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTTCCCTGGTTCCCAGCTaGTGCTCCTGCGGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHASLVPS*CSCGAS
Trigger: AGAGGCGCCGCAGGAGCAGCAGCTGGGAACCAGGGA...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ATCCTGCATTGGGTCTGCAAGTGGCAGGTGCTACTAAAGACTCTAGGACCAAGATGGACGCCGGCTGACTaGGCCCTGGGGCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ILHWVCKWQVLLKTLGPRWTPAD*ALGLSP
Trigger: GGGAGAAAGCCCCAGGGCGCAGTCAGCCGGCGTCCA...TCTTGGTCCTAGAGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATGCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTTCACCGTCCGGGGTCTaGACCGCGATGGTGCGAGCG +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSSPSGV*TAMVRA
Trigger: CGCTCGCACCATCGCGGTGCAGACCCCGGACGGTGA...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGCTCGCAGAGCGTGGCTaGTGGCTCTGGCGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWLAERG*WLWRGA
Trigger: CGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAG...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACAGGCTGCACCAGGCGATaGTTGGCGAAGGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTGCTRR*LAKGPR
Trigger: CCGGGGACCCTTCGCCAAGCATCGCCTGGTGCAGCC...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGCTGTCACAGGCACAGTaGCGAGCTGGAGCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPLSQAQ*RAGAGL
Trigger: TAGCCCCGCTCCAGCTCGGCACTGTGCCTGTGACAG...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAAAGCGCAGCTCCTGACTaGCGCTCTCAGGAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: IARAGEAPAVPAVISHLKSAAPD*RSQEAS
Trigger: ACTGGCCTCCTGAGAGCGGCAGTCAGGAGCTGCGCT...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGAGGGATGCGCTGCGGTaGCACTGCGGGCACGTGATG +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGRDALR*HCGHVM
Trigger: CATCACGTGCCCGCAGTGCCACCGCAGCGCATCCCT...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGCATGCTCGGGACACGTaGGGAACTTGCGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGHARDT*GTCGPC
Trigger: GCACGGCCCGCAAGTTCCCCACGTGTCCCGAGCATG...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAAGCTGTGGGTGAAGGGTaGCATCCTCCAGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: IARAGEAPAVPAVISHLKAVGEG*HPPGQR
Trigger: ACGCTGGCCTGGAGGATGCCACCCTTCACCCACAGC...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTAAGACCCCGTCCACGTaGCTGAAGGCTGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHAKTPST*LKAVGP
Trigger: GGGCCCCACAGCCTTCAGCCACGTGGACGGGGTCTT...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTCTCAGGAACTGCCAAAGAATGTaGTCAACAAACACAGCTACC +
Preference number: 4 (lower is better)
Translates to: GQHPGRGITAQLLTAALRNCQRM*STNTAT
Trigger: GGTAGCTGTGTTTGTTGACCACATTCTTTGGCAGTT...CCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCTTGAGAGAAGAGCGATaGATCCGGACGAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPLREER*IRTRLP
Trigger: GGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAA...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCCCGAGGGCCTGGCCTaGTCTGCAGTGCCCGCATCA +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCPEGLA*SAVPAS
Trigger: TGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGG...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGGGGGCTCTGGGTGTCTaGTTTCCAGGGCTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMGALGV*FPGLGG
Trigger: TCCTCCTAGCCCTGGAAACCAGACACCCAGAGCCCC...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp AAGGAGAGCTGGATGCTGTCCCTGGCATCGGCCGTATaGCTTCTGGGCTCCTGGAGGAGTCAGAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KESWMLSLASAV*LLGSWRSQKRE
Trigger: CTCCCTTTTCTGACTCCTCCAGGAGCCCAGAAGCAATACGGCCGATGCCAGGGACAGCATCCAGCTCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AGACATGAAGCCCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTGCTCCAGGGCGCCTTTaGCCCACTGCTCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: RHEARMLTPLRKVLLGECAPGRL*PTAPET
Trigger: TGTCTCAGGAGCAGTGGGTCAAAGGCGCCCTGGAGC...ACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGGGCTTCATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCCGTTGTAGGTGCTGTTaGAGTGAAGACCGTCGATGG +
Preference number: 4 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTARCRCC*SEDRRW
Trigger: CCATCGACGGTCTTCACTTCAACAGCACCTACAACG...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACAGCGGGGCTAATTGCCTaGCAGCTTTGGCCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTAGLIA*QLWPPQ
Trigger: CTGGGGCGGCCAAAGCTGTCAGGCAATTAGCCCCGC...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTTACAGCGCAGCTCCTaGCTGCCGCTCTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGLQRSS*LPLSGG
Trigger: GCCTCCTGAGAGCGGCAGTCAGGAGCTGCGCTGTAA...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCCTGTCATTTCTACTCTaGAACCCGGGACCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTALSFLL*NPGPSW
Trigger: CCAGGAAGGTCCCGGGTTTCAGAGTAGAAATGACAG...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGACTCCCCCTAAGGATTaGCCCTCCCTCACTACCTCA +
Preference number: 4 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVTPPKD*PSLTTS
Trigger: TGAGGTAGTGAGGGAGGGTCAATCCTTAGGGGGAGT...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGACATAGCTCGTGCTGGTaGAGCCCCAGCAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PFTLQRPLETKEASCEMRHSSCW*SPSSPS
Trigger: GCTGGGACTGCTGGGGCTTCACCAGCACGAGCTATG...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTCTGCCAGCGCTGCTCTaGGCTGGGGATGAATGGCCG +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSLPALL*AGDEWP
Trigger: CGGCCATTCATCCCCAGCGCAGAGCAGCGCTGGCAG...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTTCTGCACCGCGATGGTaGGAGCGCAAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHASAPRW*ERKAGR
Trigger: TCTGCCTGCCTTGCGCTCGCACCATCGCGGTGCAGA...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp TTGAAAACAGATGGCAGGAAACATAGACATGAAGCCCGAATGCTGACTCCCTTGGGTCCAGGGATGCGCTaGGGTGGCACTGCGGGCACG +
Preference number: 4 (lower is better)
Translates to: LKTDGRKHRHEARMLTPLGPGMR*GGTAGT
Trigger: CGTGCCCGCAGTGCCACCGCAGCGCATCCCTGGACC...CAAGGGAGTCAGCATTCGGGCTTCATGTCTATGTTTCCTGCCATCTGTTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTCCACGGTGGCCCCCTTaGACACGCCACCTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQAPRWPP*TRHLPS
Trigger: GGACGGAAGGTGGCGTGTGCAAGGGGGCCACCGTGG...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGAGCTCCACAGAGCCTaGCCAGGCTCAATCCGGAAA +
Preference number: 4 (lower is better)
Translates to: HSHRAPFKQASPGMETYGELHRA*PGSIRK
Trigger: TTTCCGGATTGAGCCTGGGCAGGCTCTGTGGAGCTC...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGCCCACTTCTTCTGGGTaGCGAGAAAGCCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPPTSSG*RESLGL
Trigger: GAGCCCCAGGCTTTCTCGGCACCCAGAAGAAGTGGG...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTTGCGCTGGGGATGAATaGCCGGAGCTCGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHACAGDE*PELGRL
Trigger: CAGTCTCCCGAGCTCCGGCCATTCATCCCCAGCGCA...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTGGTCCCCGGGATGGATaGCACTTGAGCTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHAGPRDG*HLSWQA
Trigger: TGCCTGCCAGCTCAAGTGCCATCCATCCCGGGGACC...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCGCACCAGGCGATGCTTaGCGAAGGGTCCCCGGGATG +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCAPGDA*RRVPGM
Trigger: CATCCCGGGGACCCTTCGCCAAGCATCGCCTGGTGC...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGTGTGCTGCTTCCACATaGCCCCCAGCGGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPCAAST*PPAASP
Trigger: AGGTGAAGCCGCTGGGGGCCATGTGGAAGCAGCACA...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTCCAACACCCGGGGCGTaGGATTACAGCGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHAPTPGA*DYSAAP
Trigger: AGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGG...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCTATCAAGATAAAGGCTaGCAGCTTTGTCACATACAG +
Preference number: 4 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPYQDKG*QLCHIQ
Trigger: CTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATA...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGGCAGCTCCTTGCCCTaGTCACAAGGAGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: HSHRAPFKQASPGMETYGGSSLP*SQGGLD
Trigger: ATCCAAGCCTCCTTGTGACCAGGGCAAGGAGCTGCC...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGAGGGCTAGGAGGAGTTaGAGAGGCTTCCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGRARRS*RGFPGW
Trigger: CCAGCCGGGGAAGCCTCTCCAACTCCTCCTAGCCCT...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp CCGGCCACATCTGCAGAGACAGCGGACCAAGCAGCCTaGCAGACCAAGAGCATGAGCTTTGAGGTAGGATTG +
Preference number: 4 (lower is better)
Translates to: PATSAETADQAA*QTKSMSFEVGL
Trigger: CAATCCTACCTCAAAGCTCATGCTCTTGGTCTGCAAGGCTGCTTGGTCCGCTGTCTCTGCAGATGTGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTAGGGGTGATAGCGAGGTaGGACAGGCAGGTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLGVIAR*DRQVRR
Trigger: CCTTCGCACCTGCCTGTCTCACCTCGCTATCACCCC...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTGGCACTGCGGGCACGTaGTGGAGCTCGAAGACGAGG +
Preference number: 4 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQAGTAGT*WSSKTR
Trigger: CCTCGTCTTCGAGCTCCATCACGTGCCCGCAGTGCC...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATAAGAGGCCACCGGATTTaGGGGCATTACCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QTTGITWWFSTCGGPQEIRGHRI*GHYPPA
Trigger: TGCAGGAGGGTAATGCCCTCAAATCCGGTGGCCTCT...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGGTCAACGTCAATCATTaGAAAAGCCAGGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLVNVNH*KSQGLP
Trigger: GGGGAGGCCCTGGCTTTTTCAATGATTGACGTTGAC...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGGGTGAGACAGGCAGGTaGGAAGGCCGCTCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWGETGR*EGRSAV
Trigger: CACGGCTGAGCGGCCTTCGCACCTGCCTGTCTCACC...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACAGGCATCACACGGGCATaGCCACTTCACAGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTGITRA*PLHSRG
Trigger: CCCTCGGCTGTGAAGTGGGCATGCCCGTGTGATGCC...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACACCTCGTGCTTGGCGTaGCGGCCCTCCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDTSCLA*RPSSRH
Trigger: GTGCCTGGAGGAGGGCCGGCACGCCAAGCACGAGGT...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTAGCTGGTGGATGGCCTaGAGCAGCGGCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQASWWMA*SSGSLS
Trigger: GGACAGCGAGCCGCTGCTGCAGGCCATCCACCAGCT...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGAAGGCTGTGGGGCCCTaGTGCTGCCCGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: FRRLSCLCVCEREREGGRKAVGP*CCPLMK
Trigger: CTTCATCAACGGGCAGCAGCAGGGCCCCACAGCCTT...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACAAGAGATCCCGCCCACTaGATCAGGGCAGAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTRDPAH*IRAEPS
Trigger: GGACGGCTCTGCCCTGATGCAGTGGGCGGGATCTCT...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTCTCCGCAGCAGAGACTaGAACACAGCACCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHALRSRD*NTAPSS
Trigger: GCTGCTCGGTGCTGTGTTGCAGTCTCTGCTGCGGAG...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAAGTCACCAGGCAGCCCTaGCTAGCCCACTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: IARAGEAPAVPAVISHLKVTRQP*LAHSHS
Trigger: AGAATGAGAGTGGGCTAGGCAGGGCTGCCTGGTGAC...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGAGATGGGCGATTCTTCTaGAGAGCTGGGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PFTLQRPLETKEASCEMRDGRFF*RAGATW
Trigger: CCAGGTGGCCCCAGCTCTGCAGAAGAATCGCCCATC...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGGGGCCTCCCCCAACCTaGATAGCTCGTGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: FRRLSCLCVCEREREGGRGPPPT*IARAGE
Trigger: TTCACCAGCACGAGCTATGCAGGTTGGGGGAGGCCC...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCGCATTGAATGTTTTCTaGTTTGCCCGCTCCCCACTT +
Preference number: 4 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPALNVF*FARSPL
Trigger: AAGTGGGGAGCGGGCAAAGCAGAAAACATTCAATGC...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACAATTGACCCGCTTCCCTaGTTCCCAGCTGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTIDPLP*FPAAAP
Trigger: AGGAGCAGCAGCTGGGAACCAGGGAAGCGGGTCAAT...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTGTTGAGGCTGAGGGCTaGCATGAAGACCCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHAVEAEG*HEDPVH
Trigger: GTGGACGGGGTCTTCATGCCAGCCCTCAGCCTCAAC...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCTGTGAGCATGGCCCGTaGACCCATTCCCTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCCEHGP*THSLRP
Trigger: GGGACGCAGGGAATGGGTCCACGGGCCATGCTCACA...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGTCCAGAGTCCTGCCCTaGCAGGTCAGACTCGGCACA +
Preference number: 4 (lower is better)
Translates to: FRRLSCLCVCEREREGGRSRVLP*QVRLGT
Trigger: TGTGCCGAGTCTGACCTGCCAGGGCAGGACTCTGGA...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGCTGGGAACAAGAGCCTaGCAGGCTCAAAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPLGTRA*QAQNPC
Trigger: GCAGGGGTTTTGAGCCTGCCAGGCTCTTGTTCCCAG...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATACCTCCTCAAACTTGGTaGGCCATAGGGCACCTAGGG +
Preference number: 4 (lower is better)
Translates to: QTTGITWWFSTCGGPQEIPPQTW*AIGHLG
Trigger: CCCTAGGTGCCCTATGGCCCACCAAGTTTGAGGAGG...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCGAGGTTGAGAAACCCTaGCGCCACCCCACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCEVEKP*RHPTGC
Trigger: ACAGCCCGTGGGGTGGCGCCAGGGTTTCTCAACCTC...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTCCCCCTGAAGACACATaGAAAATCCTGGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LCSLREERWIRTRLPWRSPPEDT*KILGLG
Trigger: ACCCAAGCCCAGGATTTTCCATGTGTCTTCAGGGGG...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACGGACGAGACTTCCCTaGAGGTCTCAACTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTRTRLP*RSQLPA
Trigger: AGCTGGGAGTTGAGACCTCCAGGGAAGTCTCGTCCG...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGAGAGGCTTCCCCGGCTaGGTCTCACCCAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGRGFPG*VSPSKH
Trigger: GTGCTTACTGGGTGAGACCCAGCCGGGGAAGCCTCT...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTGGTGCCGAGAAAGCCTaGGGCTCTGGGTGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHAGAEKA*GSGCLV
Trigger: AACCAGACACCCAGAGCCCCAGGCTTTCTCGGCACC...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGTCTCGCTGTACAAGCTaGGCTTGTCCGCGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FRRLSCLCVCEREREGGRSRCTS*ACPRGL
Trigger: GAGACCACGCGGACAAGCTCAGCTTGTACAGCGAGA...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGACACCTGGACGCGCTTaGTCAGAGCATCTGAGATCT +
Preference number: 4 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMTPGRA*SEHLRS
Trigger: AGATCTCAGATGCTCTGATCAAGCGCGTCCAGGTGT...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCTCTGAGAGGTGTGGATaGATCAATGTGGATCTCAAG +
Preference number: 4 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPSERCG*INVDLK
Trigger: CTTGAGATCCACATTGATTCATCCACACCTCTCAGA...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTCAACTTGTGCTCCAATaGTGGGCGATTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LCSLREERWIRTRLPWRSQLVLQ*WAILLQ
Trigger: CTGCAGAAGAATCGCCCATCATTGGAGCACAAGTTG...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACAGATAGTTGTGCCTTGTaGTGCTTCCACATGGCCCCC +
Preference number: 4 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTDSCAL*CFHMAP
Trigger: GGGGGCCATGTGGAAGCAGCACAAGGCACAACTATC...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTCAGCATTTCTCCAGCTaGAGTAGGGGGACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSQHFSS*SRGTGG
Trigger: GCCACCCGTCCCCCTACTGCAGCTGGAGAAATGCTG...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTGTGTGCAGGGTGACCTaGACGTTGCGGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSVCRVT*TLRLRL
Trigger: CAGCCTCAACCGCAACGTGCAGGTCACCCTGCACAC...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGACTTCCAATCCTGTGTaGAGGGTGACCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: HSHRAPFKQASPGMETYGTSNPV*RVTCTL
Trigger: CAACGTGCAGGTCACCCTGCACACAGGATTGGAAGT...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACACTTGCCGGCCACATCTaGAGAGACAGCGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTLAGHI*RDSGPS
Trigger: GCTTGGTCCGCTGTCTCTGCAGATGTGGCCGGCAAG...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CGGCACACCCAGTCTCACAGTGGGAAGCTGGGAGACAAGGTACCTGATACTGCCCTGGGATGCTATGTATaGAGTGAGGTGCTAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RHTQSHSGKLGDKVPDTALGCYV*SEVLVD
Trigger: ATCCACTAGCACCTCACTGCATACATAGCATCCCAG...GGCAGTATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTGTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGCCTTTCCCAGGACTGTaGTCCTTGAGAGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPPFPGL*SLREER
Trigger: TCGCTCTTCTCTCAAGGAGCACAGTCCTGGGAAAGG...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGGGCAGGCAGACATTGTaGGAACAGGGCAGGATGATA +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPGRQTL*EQGRMI
Trigger: TATCATCCTGCCCTGTTCCCACAATGTCTGCCTGCC...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGACTCCATCAGTCCGGTaGACTGACGCAGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMTPSVR*TDAASM
Trigger: CATTGAAGCTGCGTCAGTCCACCGGACTGATGGAGT...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGCAAGACCCAACAGGTTaGCATCTGTTGGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: HSHRAPFKQASPGMETYGQDPTG*HLLEVA
Trigger: AGCCACCTCCAACAGATGCCAACCTGTTGGGTCTTG...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGGGGAGTTGCAGTGCATaGACCAGCTGCGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGGSCSA*TSCGCC
Trigger: ACAACAACCGCAGCTGGTTCATGCACTGCAACTCCC...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTGAAAATGTGTTTCTATaGCACTCCACGCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LCSLREERWIRTRLPWRSENVFL*HSTLPG
Trigger: ACCTGGCAGCGTGGAGTGTCATAGAAACACATTTTC...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGACAATAGGGTGGACTaGCTAGAACAGGCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: HSHRAPFKQASPGMETYGDNRVD*LEQAFP
Trigger: TGGGAAAGCCTGTTCTAGTCAGTCCACCCTATTGTC...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTGACACTTCCCAAAGCTaGTGGCTTCCTTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSDTSQS*WLPWPQ
Trigger: CTGGGGCCAAGGAAGCCATCAGCTTTGGGAAGTGTC...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTAGGGGGCATCTTCAGTaGGTGAAAATTCAAGACCCA +
Preference number: 4 (lower is better)
Translates to: LCSLREERWIRTRLPWRSRGHLQ*VKIQDP
Trigger: TGGGTCTTGAATTTTCACTCACTGAAGATGCCCCCT...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCGGTGGCAATTTCATCTaGATGAAGTCCAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSGGNFI*MKSSWW
Trigger: CCACCAGCTGGACTTCATTCAGATGAAATTGCCACC...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCAGCTCACGCAGTACATaGTGTAGTTCTCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPSSRST*CSSPFH
Trigger: ATGAAATGGAGAACTACAGCATGTACTGCGTGAGCT...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTAAGAAGGTGAGAGTGTaGTTATTCAGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LCSLREERWIRTRLPWRSKKVRV*LFRSSS
Trigger: GCTGCTGGACCTGAATAAGCACACTCTCACCTTCTT...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGCCTTTCTATCAATCCTaGATTGGGTCTGCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVPFYQS*IGSASG
Trigger: GCCACTTGCAGACCCAATGCAGGATTGATAGAAAGG...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCGTGTTTCCAGAGTCCTaGCCTGGCAGGTCAGACTCG +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCVFPES*PGRSDS
Trigger: CGAGTCTGACCTGCCAGGGCAGGACTCTGGAAACAC...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGAGCCCCAGGCAACTTGTaGTCCAATGATGGGCGATTC +
Preference number: 4 (lower is better)
Translates to: PFTLQRPLETKEASCEMRAPGNL*SNDGRF
Trigger: GAATCGCCCATCATTGGAGCACAAGTTGCCTGGGGC...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTCAAACCCATTCACACTaGAGAGACCCCTCGAAACAA +
Preference number: 4 (lower is better)
Translates to: LCSLREERWIRTRLPWRSQTHSH*RDPSKQ
Trigger: TTGTTTCGAGGGGTCTCTGCAGTGTGAATGGGTTTG...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTCACCCAGTCTCACAGTaGGAAGCTGGGAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHAHPVSQ*EAGRQG
Trigger: ACCTTGTCTCCCAGCTTCCCACTGTGAGACTGGGTG...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGACTCAAGGGAGAAGCCTaGTGTTTCCAGAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PFTLQRPLETKEASCEMRLKGEA*CFQSPA
Trigger: GGCAGGACTCTGGAAACACCAGGCTTCTCCCTTGAG...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGGCCCCAGGAAAGTGGTaGCTCCTCTTCATCCTCAAT +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPAPGKW*LLFILN
Trigger: ATTGAGGATGAAGAGGAGCCACCACTTTCCTGGGGC...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ATCCTGCATTGGGTCTGCAAGTGGCAGGTGCTACTAAAGACTCTAGGACCAAGAATTCTTCTGCAGAGCTaGGGCCACCTGGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: ILHWVCKWQVLLKTLGPRILLQS*GHLVTW
Trigger: CCAGGTCACCAGGTGGCCCCAGCTCTGCAGAAGAAT...TCTTGGTCCTAGAGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCGCTGGATGCTGTCCCTaGCATCGGCCGTATTGCTTC +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCAGCCP*HRPYCF
Trigger: GAAGCAATACGGCCGATGCCAGGGACAGCATCCAGC...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp AGACATGAAGCCCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTGTGGTTCTCAACTTGTaGAGGCCCCCAGGAGATACC +
Preference number: 4 (lower is better)
Translates to: RHEARMLTPLRKVLLGECVVLNL*RPPGDT
Trigger: GGTATCTCCTGGGGGCCTCCACAAGTTGAGAACCAC...ACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGGGCTTCATGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCCATACAGGCTTTCTATaGAACAAAGCAGCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSHTGFL*NKAAGA
Trigger: CGCTCCGGCTGCTTTGTTCCATAGAAAGCCTGTATG...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGGGTCACAAGGAGGCTTaGATGGAAGACACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPGHKEA*MEDTGQ
Trigger: CTGACCAGTGTCTTCCATCCAAGCCTCCTTGTGACC...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGGTCTATTTTACCCACTaGAGGCCAGGCAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPVYFTH*RPGSSL
Trigger: CAAGGAGCTGCCTGGCCTCCAGTGGGTAAAATAGAC...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AGACATGAAGCCCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCAAAACCCCTGCCATaGGCTGTCTCTGAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RHEARMLTPLRKVLLGECSKPLP*AVSERC
Trigger: ACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGA...ACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGGGCTTCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGTACCTTCCCCTGCTTTaGATTAGGAGCTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPYLPLL*IRSWDA
Trigger: AGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTA...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGAGCTGCAGGATCCTTTaGTCTTCTGGGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGSCRIL*SSGRNC
Trigger: GCAGTTCCTCCCAGAAGATCAAAGGATCCTGCAGCT...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGGCTGAACTTGGTGTCTaGTCAATACATCCTGCCCGA +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPAELGV*SIHPAR
Trigger: TCGGGCAGGATGTATTGATCAGACACCAAGTTCAGC...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGGGAGGTAGGTTAGTATaGCTAGTCTCATTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLGGRLV*LVSFQV
Trigger: CACCTGAAATGAGACTAGTCATACTAACCTACCTCC...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGCACCCAGTAAGCACCTaGCATGTTCCTGCTACTGCA +
Preference number: 4 (lower is better)
Translates to: FRRLSCLCVCEREREGGRHPVST*HVPATA
Trigger: TGCAGTAGCAGGAACATGTCAGGTGCTTACTGGGTG...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAATATGACACTCCACGCTaGCAGGTTGCACCCATGATT +
Preference number: 4 (lower is better)
Translates to: IARAGEAPAVPAVISHLKYDTPR*QVAPMI
Trigger: AATCATGGGTGCAACCTGGCAGCGTGGAGTGTCATA...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCAGCATGATGAGAATCTaGAATCTCGGGACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSSMMRI*NLGTLR
Trigger: CCTCAGAGTCCCGAGATTGCAGATTCTCATCATGCT...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACAAGGGCATTACCCTCCTaGACTTTCCACTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTRALPS*TFHFSP
Trigger: AGGAGAGAAGTGGAAAGTGCAGGAGGGTAATGCCCT...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTTGGCATCGGCCGTATTaGTTCTGGGCTCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQAWHRPY*FWAPGG
Trigger: TCCTCCAGGAGCCCAGAAGCAATACGGCCGATGCCA...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGCCCTCTACAGATCCATaGATGACAAACCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMPSTDP*MTNHWH
Trigger: ATGCCAGTGGTTTGTCATGCATGGATCTGTAGAGGG...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGATCCTGCCCGAAACCTaGCCTCATATTTTTACAGCC +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPILPET*PHIFTA
Trigger: GGCTGTAAAAATATGAGGGCAGGTTTCGGGCAGGAT...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTAGAGGAAGGGTTCCCTaGGAACAAGAGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQARGRVP*EQEPGR
Trigger: CCTGCCAGGCTCTTGTTCCCAGGGAACCCTTCCTCT...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGCAGGTTGGCATCTGTTaGAGGTGGCTCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: FRRLSCLCVCEREREGGRQVGIC*RWLTPF
Trigger: AAATGGGGTGAGCCACCTCCAACAGATGCCAACCTG...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGATCAGTCCGGTGGACTaGCGCAGCTTCAATGTGCAG +
Preference number: 4 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWISPVD*RSFNVQ
Trigger: CTGCACATTGAAGCTGCGTCAGTCCACCGGACTGAT...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGAGGGGTCGTTCTCCTTaGTCACCTCCAGGCAGTACT +
Preference number: 4 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWRGRSP*SPPGST
Trigger: AGTACTGCCTGGAGGTGATCAAGGAGAACGACCCCT...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ATCCTGCATTGGGTCTGCAAGTGGCAGGTGCTACTAAAGACTCTAGGACCAAGAGTTGCTACTGGCAGATaGTGGGTAGAGACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: ILHWVCKWQVLLKTLGPRVATGR*WVETRD
Trigger: ATCCCTGGTCTCTACCCATCATCTGCCAGTAGCAAC...TCTTGGTCCTAGAGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGGCATCTTCAGTGAGTaGAAATTCAAGACCCAACAG +
Preference number: 4 (lower is better)
Translates to: HSHRAPFKQASPGMETYGGIFSE*KFKTQQ
Trigger: CTGTTGGGTCTTGAATTTTCACTCACTGAAGATGCC...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGACTCCCAGCTCCTGACTaGTGTCAACGTCAATCATTG +
Preference number: 4 (lower is better)
Translates to: PFTLQRPLETKEASCEMRLPAPD*CQRQSL
Trigger: CAATGATTGACGTTGACATCAGTCAGGAGCTGGGAG...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAAGCAATTTCATCTGAATaGAGTCCAGCTGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: IARAGEAPAVPAVISHLKAISSE*SPAGGW
Trigger: CCATCCACCAGCTGGACTTCATTCAGATGAAATTGC...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTCGCTGTTGTTACGGGTaGAGCATTTCTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSRCCYG*SISPAA
Trigger: TGCAGCTGGAGAAATGCTGCACCCGTAACAACAGCG...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAAGAATGTTTTCTGCTTTaGCCGCTCCCCACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IARAGEAPAVPAVISHLKECFLL*PLPTSS
Trigger: AGAAGAAGTGGGGAGCGGGCAAAGCAGAAAACATTC...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGTTCGTAATGTCTGGGTaGAATAAGGGTGACACACGT +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPFVMSG*NKGDTR
Trigger: ACGTGTGTCACCCTTATTCCACCCAGACATTACGAA...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGCTATCAATCCTGCATTaGGTCTGCAAGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FRRLSCLCVCEREREGGRLSILH*VCKWQV
Trigger: CACCTGCCACTTGCAGACCCAATGCAGGATTGATAG...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTAACTTCTCTCCTGACCTaGATGCTGCTCCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLTSLLT*MLLPQR
Trigger: CCTTTGAGGGAGCAGCATCCAGGTCAGGAGAGAAGT...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGCCCCCGTGTTTTCAGTaGAACATCCACAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: RPATGATCVHDAFIMTIGPPCFQ*NIHSNR
Trigger: CCTATTGCTGTGGATGTTCCACTGAAAACACGGGGG...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp GTGGGTTATTTGAGCTTAGTGAGAATGGTGGGCGTTTaGCCTGTGAATGTCACTGTCACAGGCACAGTGCCG +
Preference number: 4 (lower is better)
Translates to: VGYLSLVRMVGV*PVNVTVTGTVP
Trigger: CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCACTAAGCTCAAATAACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.5
ENST00000444294.7
3UTR CAA 72 bp GCCAGGTTAAAAGAGGGAAGTAACCGAGGGCTGAACTaGGTGTCTGATCAATACATCCTGCCCGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: ARLKEGSNRGLN*VSDQYILPETC
Trigger: GCAGGTTTCGGGCAGGATGTATTGATCAGACACCAAGTTCAGCCCTCGGTTACTTCCCTCTTTTAACCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGAAGCAGCTTGGCTTTCTaGCGAGTTAAAGCATCCACA +
Preference number: 4 (lower is better)
Translates to: PFTLQRPLETKEASCEMRSSLAF*RVKAST
Trigger: TGTGGATGCTTTAACTCGTCAGAAAGCCAAGCTGCT...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATATCAATGTGCAGTGATTaGTCTGGTCCCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: QTTGITWWFSTCGGPQEISMCSD*SGPKPS
Trigger: AGATGGTTTGGGACCAGATCAATCACTGCACATTGA...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATATGTCATTGGATAAAATaGTGTCCCGATGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: QTTGITWWFSTCGGPQEICHWIK*CPDAQS
Trigger: ACTCTGGGCATCGGGACATCATTTTATCCAATGACA...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAAGTTCTAACACTTCAGTaGGAGAGGCAAAAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: IARAGEAPAVPAVISHLKVLTLQ*ERQKSS
Trigger: GCTTGACTTTTGCCTCTCTCACTGAAGTGTTAGAAC...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACAATGTCAGTAGAGGTTaGGAAACCCTGGCGCCACCC +
Preference number: 4 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDNVSRG*ETLAPP
Trigger: GGGTGGCGCCAGGGTTTCTCAACCTCTACTGACATT...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGCCAGCATCACCATCTTaGATATTTGCCAATAAGATC +
Preference number: 4 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLPASPS*IFANKI
Trigger: GATCTTATTGGCAAATATTCAAGATGGTGATGCTGG...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AGACATGAAGCCCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTGAAGTAACCGAGGGCTaGACTTGGTGTCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: RHEARMLTPLRKVLLGECEVTEG*TWCLIN
Trigger: ATTGATCAGACACCAAGTTCAGCCCTCGGTTACTTC...ACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGGGCTTCATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACCAGGACTGTGCTCCTTaGGAGAAGAGCGATGGATCC +
Preference number: 4 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDQDCAP*EKSDGS
Trigger: GGATCCATCGCTCTTCTCTCAAGGAGCACAGTCCTG...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAAAGGTGGGGCTCCAGCTaGCTGCTCGCCGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKRWGSS*LLADPW
Trigger: CCAGGGGTCGGCGAGCAGGCAGCTGGAGCCCCACCT...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCTCCACGCTGCCAGGTTaGACCCATGATTTGCATATC +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCSTLPG*THDLHI
Trigger: GATATGCAAATCATGGGTGCAACCTGGCAGCGTGGA...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTCAGGCTCAAAACCCCTaGCATGAGCTGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQAQAQNP*HELSLR
Trigger: TCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTG...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCCTAGCAAAGAACAACTaGAGAACCACATTACAGAGG +
Preference number: 4 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSLAKNN*RTTLQR
Trigger: CCTCTGTAATGTGGTTCTGCAGTTGTTCTTTGCTAG...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGAAAGGTAACGAGTTTTaGTTTCTAGGAAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: HSHRAPFKQASPGMETYGKGNEF*FLGSGE
Trigger: CTCCCCACTTCCTAGAAAGCAAAACTCGTTACCTTT...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACATCCAGTCCGTTTTCCTaGATCTGCTGCAATATGTTC +
Preference number: 4 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTSSPFS*ICCNMF
Trigger: GAACATATTGCAGCAGATCCAGGAAAACGGACTGGA...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTCTCACAGTGGGAAGCTaGGAGACAAGGTACCTGATA +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSLTVGS*ETRYLI
Trigger: TATCAGGTACCTTGTCTCCCAGCTTCCCACTGTGAG...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGAACCACTGGCATAACCTaGTGGTTCTCAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PFTLQRPLETKEASCEMRTTGIT*WFSTCG
Trigger: TCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGT...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp AGACATGAAGCCCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTGCATGACAAACCACTaGCATAACCTGGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RHEARMLTPLRKVLLGECCMTNH*HNLVVL
Trigger: GAGAACCACCAGGTTATGCCAGTGGTTTGTCATGCA...ACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGGGCTTCATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGGATCCTTTGATCTTCTaGGAGGAACTGCCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPDPLIF*EELPKN
Trigger: ATTCTTTGGCAGTTCCTCCCAGAAGATCAAAGGATC...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGGTTAGTGTCCTTCCTTaGTTTAAAGGGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPVSVLP*FKGASA
Trigger: AGCAGAAGCCCCTTTAAACCAAGGAAGGACACTAAC...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTCCTGAAGCCTGGTTTTaGCCTCTCCTCAGAGCTTTA +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSPEAWF*PLLRAL
Trigger: TAAAGCTCTGAGGAGAGGCCAAAACCAGGCTTCAGG...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp TCAAACTTGGTGGGCCATAGGGCACCTAGGGCGCTGTaGCAACTACAAAGTACATATCAGGCTGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: SNLVGHRAPRAL*QLQSTYQAEDA
Trigger: TGCATCTTCAGCCTGATATGTACTTTGTAGTTGCAACAGCGCCCTAGGTGCCCTATGGCCCACCAAGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp TACCTGCCCCCTGAAGACACATGGAAAATCCTGGGCTaGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACA +
Preference number: 4 (lower is better)
Translates to: YLPPEDTWKILG*GIKIKAGSFVT
Trigger: TGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATTTTCCATGTGTCTTCAGGGGGCAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTAAGCTTCAATGTGCAGTaGTTGATCTGGTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLSFNVQ*LIWSQT
Trigger: GGTTTGGGACCAGATCAATCACTGCACATTGAAGCT...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp TTGAAAACAGATGGCAGGAAACATAGACATGAAGCCCGAATGCTGACTCCCTTGTGGGCGTTTTGCCTGTaGATGTCACTGTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LKTDGRKHRHEARMLTPLWAFCL*MSLSQA
Trigger: TGCCTGTGACAGTGACATTCACAGGCAAAACGCCCA...CAAGGGAGTCAGCATTCGGGCTTCATGTCTATGTTTCCTGCCATCTGTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CACTCACACAGAGCGCCATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGTTGAAGTCAGAACATTaGAGGTGTTTTGTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HSHRAPFKQASPGMETYGLKSEH*RCFVLK
Trigger: CTTCAGCACAAAACACCTTCAATGTTCTGACTTCAA...CCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATGGCGCTCTGTGTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCCCTTCTTCACTTTTCTaGTCCCTCAAAAACACAAGT +
Preference number: 4 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSPSSLF*SLKNTS
Trigger: ACTTGTGTTTTTGAGGGATCAGAAAAGTGAAGAAGG...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTAGTTAACTTCTTGGGCTaGCAGTTTCAGAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLVNFLG*QFQKGA
Trigger: GGCTCCTTTCTGAAACTGGCAGCCCAAGAAGTTAAC...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCATTGGGTCTGCAAGTaGCAGGTGCTACTAAAGACT +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCHWVCK*QVLLKT
Trigger: AGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATG...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ATCCTGCATTGGGTCTGCAAGTGGCAGGTGCTACTAAAGACTCTAGGACCAAGAAAAAACACAAGTGTGTaGCACGGACCTGTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: ILHWVCKWQVLLKTLGPRKNTSV*HGPVVL
Trigger: GAGAACGACAGGTCCGTGCCACACACTTGTGTTTTT...TCTTGGTCCTAGAGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATGCAGGAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTACAAGGAGGCTTGGATaGAAGACACTGGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSTRRLG*KTLVRE
Trigger: TTCTCTGACCAGTGTCTTCCATCCAAGCCTCCTTGT...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp TGGCACGGACCTGTCGTTCTCTTTGAAGTCAGAACATaGAAGGTGTTTTGTGCTGAAGACAGGAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: WHGPVVLFEVRT*KVFCAEDRRGV
Trigger: GACACCTCTCCTGTCTTCAGCACAAAACACCTTCAATGTTCTGACTTCAAAGAGAACGACAGGTCCGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp CCACTAGCCCAACCAGCCTTCAAAACTTCGGCTCAGTaGCATCTCTTCGTGCTATCCACACTGGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: PLAQPAFKTSAQ*HLFVLSTLDFK
Trigger: TTTGAAATCCAGTGTGGATAGCACGAAGAGATGCAACTGAGCCGAAGTTTTGAAGGCTGGTTGGGCTAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp CAGCTTAGTGCCAACGCAGCAATCCTACATCATGCATaGAATGTTTTCTGCTTTGCCCGCTCCCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: QLSANAAILHHA*NVFCFARSPLL
Trigger: AAGAAGTGGGGAGCGGGCAAAGCAGAAAACATTCAATGCATGATGTAGGATTGCTGCGTTGGCACTAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTACCTGTCGTTCTCTTTaGAGTCAGAACATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: VDPFPASPRKCVSMTLHATCRSL*SQNIEG
Trigger: ACCTTCAATGTTCTGACTTCAAAGAGAACGACAGGT...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCAAAAGGCATACACTTTaGCCAAGCTTGCTCACTAGC +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCKRHTL*PSLLTS
Trigger: GCTAGTGAGCAAGCTTGGTCAAAGTGTATGCCTTTT...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTAAAGATCCTGCATTCTaGTCCTTTCCTGAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSKDPAF*SFPESA
Trigger: AGCACTCTCAGGAAAGGATCAGAATGCAGGATCTTT...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGACAGGTTTGAGTCACTaGATGGGAATCATTAGCTTA +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPTGLSH*MGIISL
Trigger: TAAGCTAATGATTCCCATTCAGTGACTCAAACCTGT...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTAGTTGCACCCATGATTTaGATATCCTGCTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLVAPMI*ISCFCG
Trigger: CCCACAAAAGCAGGATATGCAAATCATGGGTGCAAC...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ATCCTGCATTGGGTCTGCAAGTGGCAGGTGCTACTAAAGACTCTAGGACCAAGATTTAGGAGACTGTCATaGCTGTGTGTGTGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: ILHWVCKWQVLLKTLGPRFRRLS*LCVCER
Trigger: TCTCTCACACACACACAGGCATGACAGTCTCCTAAA...TCTTGGTCCTAGAGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATGCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCTCTTCTGGGAGGAACTaGCAAAGAATGTGGTCAACA +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCSSGRN*QRMWST
Trigger: TGTTGACCACATTCTTTGGCAGTTCCTCCCAGAAGA...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACAAGTGAAGACCGTCGATaGTACACAAAGTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTSEDRR*YTKSPY
Trigger: GTAAGGAGACTTTGTGTACCATCGACGGTCTTCACT...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAATGGAGACGGGGCAGCTaGCCTTGCCGGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKWRRGS*PCRPHL
Trigger: CAGATGTGGCCGGCAAGGCCAGCTGCCCCGTCTCCA...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAACTTTACCCGAGGGCCTaGCCTGGTCTGCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKLYPRA*PGLQCP
Trigger: CGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAG...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGAGAAAGGCAAGAAAATTaGACTTCTGTCGACGGTCAA +
Preference number: 4 (lower is better)
Translates to: PFTLQRPLETKEASCEMRERQEN*TSVDGQ
Trigger: TTGACCGTCGACAGAAGTCCAATTTTCTTGCCTTTC...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGAATATGTTCTTTAGCTaGACCAGAAACTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPNMFFS*TRNSFA
Trigger: AGCAAAGGAGTTTCTGGTTCAGCTAAAGAACATATT...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACAGCCTTTCGCTTGCAATaGGAATTAAGGCTTAAATGC +
Preference number: 4 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTAFRLQ*ELRLKC
Trigger: GCATTTAAGCCTTAATTCTCATTGCAAGCGAAAGGC...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTAATACCAACAACGAGTaGCCGAAAGTGGATGTGATG +
Preference number: 4 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQANTNNE*PKVDVM
Trigger: CATCACATCCACTTTCGGTCACTCGTTGTTGGTATT...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATAATGTATGTACAAATGTaGCACCATGATGTAACGTGT +
Preference number: 4 (lower is better)
Translates to: QTTGITWWFSTCGGPQEIMYVQM*HHDVTC
Trigger: ACACGTTACATCATGGTGGCACATTTGTACATACAT...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGCACCTAGGGCGCTGTTaGAACTACAAAGTACATATC +
Preference number: 4 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWHLGRC*NYKVHI
Trigger: GATATGTACTTTGTAGTTGCAACAGCGCCCTAGGTG...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACCTGATCAATACATCCTaGCCGAAACCTGCCCTCATA +
Preference number: 4 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDLINTS*PKPALI
Trigger: TATGAGGGCAGGTTTCGGGCAGGATGTATTGATCAG...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GTGAGAATGGTGGGCGTTTTGCCTGTGAATGTCACTGTCACAGGCACAGTGCCGAACAAACACCTCTCATaGTTAATACAACAGCTTAGT +
Preference number: 4 (lower is better)
Translates to: VRMVGVLPVNVTVTGTVPNKHLS*LIQQLS
Trigger: ACTAAGCTGTTGTATTAAGCATGAGAGGTGTTTGTT...CGGCACTGTGCCTGTGACAGTGACATTCACAGGCAAAACGCCCACCATTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTAATAGGACCAAGAGCTaGCACCAAATACCAACAACG +
Preference number: 4 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQANRTKS*HQIPTT
Trigger: CGTTGTTGGTATTTGGTGGCAGCTCTTGGTCCTATT...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCAGAAGAGCAATCTaGATGCATTTTCAGTTAACT +
Preference number: 4 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTLRRAI*MHFQLT
Trigger: AGTTAACTGAAAATGCATCCAGATTGCTCTTCTGAG...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTGTGGATGAATCAATGTaGATCTCAAGGGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQAVDESM*ISREKP
Trigger: AGGCTTCTCCCTTGAGATCCACATTGATTCATCCAC...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTAGGTCAGTTACCTTGTaGGTCAGTATTACTGGTGTC +
Preference number: 4 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQARSVTL*VSITGV
Trigger: GACACCAGTAATACTGACCCACAAGGTAACTGACCT...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACATCGTGCTATCCACACTaGATTTCAAACCCATTCACA +
Preference number: 4 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTSCYPH*ISNPFT
Trigger: TGTGAATGGGTTTGAAATCCAGTGTGGATAGCACGA...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAAGCCACCGCCCTAAGATaGTTGAGGGGCGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKATALR*LRGERR
Trigger: CCTTCTCTCGCCCCTCAATCATCTTAGGGCGGTGGC...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp AGACATGAAGCCCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTGAGAACACAATTGGCTaGTTAATAAAGGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: RHEARMLTPLRKVLLGECENTIG*LIKEAI
Trigger: AATGGCTTCCTTTATTAATCAGCCAATTGTGTTCTC...ACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGGGCTTCATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTACAAATGTGCCACCATaGTGTAACGTGTTATGGAAT +
Preference number: 4 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSTNVPP*CNVLWN
Trigger: ATTCCATAACACGTTACATCATGGTGGCACATTTGT...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCATGCTATGTATGCAGTaGGGTGCTAGTGGATATTTT +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCMLCMQ*GASGYF
Trigger: AAAATATCCACTAGCACCTCACTGCATACATAGCAT...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp TTGAAAACAGATGGCAGGAAACATAGACATGAAGCCCGAATGCTGACTCCCTTGAAACTTCGGCTCAGTTaGATCTCTTCGTGCTATCCA +
Preference number: 4 (lower is better)
Translates to: LKTDGRKHRHEARMLTPLKLRLS*ISSCYP
Trigger: TGGATAGCACGAAGAGATGCAACTGAGCCGAAGTTT...CAAGGGAGTCAGCATTCGGGCTTCATGTCTATGTTTCCTGCCATCTGTTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACAAGCAATCCTACATCATaGATTGAATGTTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTSNPTS*IECFLL
Trigger: AAGCAGAAAACATTCAATGCATGATGTAGGATTGCT...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAAATGAAGTCCAGCTGGTaGATGGCCTGCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKMKSSW*MACSSG
Trigger: GCCGCTGCTGCAGGCCATCCACCAGCTGGACTTCAT...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGGGCCACTTGTGTTCATaGTGCTTTCATAATGACAAT +
Preference number: 4 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWGHLCS*CFHNDN
Trigger: ATTGTCATTATGAAAGCATCATGAACACAAGTGGCC...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACCACAGTTGGTGCTGGTaGATGGGCGAATTTTATAAA +
Preference number: 4 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDHSWCW*MGEFYK
Trigger: TTTATAAAATTCGCCCATTCACCAGCACCAACTGTG...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACCCGTTTTCCTGGATCTaGTGCAATATGTTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDPFSWI*CNMFFS
Trigger: GCTAAAGAACATATTGCAGCAGATCCAGGAAAACGG...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR GCA 90 bp TTGAAAACAGATGGCAGGAAACATAGACATGAAGCCCGAATGCTGACTCCCTTGCACTTTGACCAAGCTTaGTCACTAGCAAAGAACAAC +
Preference number: 4 (lower is better)
Translates to: LKTDGRKHRHEARMLTPLHFDQA*SLAKNN
Trigger: GTTGTTCTTTGCTAGTGAGCAAGCTTGGTCAAAGTG...CAAGGGAGTCAGCATTCGGGCTTCATGTCTATGTTTCCTGCCATCTGTTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCGTTGGTGCTGGTGAATaGGCGAATTTTATAAAAATC +
Preference number: 4 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCVGAGE*ANFIKI
Trigger: GATTTTTATAAAATTCGCCCATTCACCAGCACCAAC...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp TACAGCCTAGATATTAGGTTAAAGCTGCAGGATCCTTaGATCTTCTGGGAGGAACTGCCAAAGAATGTGGTC +
Preference number: 4 (lower is better)
Translates to: YSLDIRLKLQDP*IFWEELPKNVV
Trigger: GACCACATTCTTTGGCAGTTCCTCCCAGAAGATCAAAGGATCCTGCAGCTTTAACCTAATATCTAGGCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAACACCTTCCGTCCTGTTaGTGTGGGAGTTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKHLPSC*CGSCSA
Trigger: TGCACTGCAACTCCCACACCAACAGGACGGAAGGTG...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp CGACGGTCAAAACAAGGACGCGAAGCTTTTTGTTTCTaGTTAAATCCCTTTGCCAACGTTAAACAAACACCT +
Preference number: 4 (lower is better)
Translates to: RRSKQGREAFCF*LNPFANVKQTP
Trigger: AGGTGTTTGTTTAACGTTGGCAAAGGGATTTAACAAGAAACAAAAAGCTTCGCGTCCTTGTTTTGACCGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACGGTGTCCTCTTTAATTaGAATCATTATTTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDGVLFN*NHYFPK
Trigger: CTTGGGAAAATAATGATTCCAATTAAAGAGGACACC...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAAGCCAGGTTGCACCCATaGTTTGCATATCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKARLHP*FAYPAF
Trigger: AAAAGCAGGATATGCAAATCATGGGTGCAACCTGGC...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR TCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAACTACAGATCCATGCATaGCAAACCACTGGCATAACC +
Preference number: 4 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKLQIHA*QTTGIT
Trigger: GGTTATGCCAGTGGTTTGTCATGCATGGATCTGTAG...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp AAGTTACTCCTCAGCCAGCCCAACAAAAGCCTCATCTaGATATCATTTATATGTATGTACAAATGTGCCACC +
Preference number: 4 (lower is better)
Translates to: KLLLSQPNKSLI*ISFICMYKCAT
Trigger: GGTGGCACATTTGTACATACATATAAATGATATCAAGATGAGGCTTTTGTTGGGCTGGCTGAGGAGTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CCA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAAGGGAATGGAAACATATaGGGTGTTACTTTCTATGGT +
Preference number: 4 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKGNGNI*GVTFYG
Trigger: ACCATAGAAAGTAACACCCCATATGTTTCCATTCCC...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
3UTR CAA 72 bp AATATATACAGTTTTATAGTGTTTAGGTCAGTTACCTaGTGGGTCAGTATTACTGGTGTCCTCTTTAATTGG +
Preference number: 4 (lower is better)
Translates to: NIYSFIVFRSVT*WVSITGVLFNW
Trigger: CCAATTAAAGAGGACACCAGTAATACTGACCCACAAGGTAACTGACCTAAACACTATAAAACTGTATATATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS GCA 90 bp ACGAGGCGGCGGACAGCGCCCGGGAGCCGAAGGTGGGGCTCCAGCTaGCTGCTCGCCGACCCCTGGGCCGCCACCCGCCGGGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: TRRRTAPGSRRWGSS*LLADPWAATRRVAG
Trigger: CCCAGCGACCCGGCGGGTGGCGGCCCAGGGGTCGGCGAGCAGGCAGCTGGAGCCCCACCTTCGGCTCCCGGGCGCTGTCCGCCGCCTCGT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 90 bp GGCCCGGAGGCTGCCTCGGCGGGCGGCGGCGGCGGCGGCGGCGGCTaGACCAGGCGATGCTTGGCGAAGGGTCCCCGGGATGGATGGCAC +
Preference number: 5 (lower is better)
Translates to: GPEAASAGGGGGGGG*TRRCLAKGPRDGWH
Trigger: GTGCCATCCATCCCGGGGACCCTTCGCCAAGCATCGCCTGGTGCAGCCGCCGCCGCCGCCGCCGCCGCCCGCCGAGGCAGCCTCCGGGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 90 bp GCCACCTCCCGCACCGCCGCCGAGGCCGCCAGCTGCACTCCCGCCTaGACCGCCGCAGGCCGGGCCAGCCGCAGCGTCGTGCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: ATSRTAAEAASCTPA*TAAGRASRSVVLQR
Trigger: TCTCTGGAGCACGACGCTGCGGCTGGCCCGGCCTGCGGCGGTGCAGGCGGGAGTGCAGCTGGCGGCCTCGGCGGCGGTGCGGGAGGTGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 90 bp GCCACCGCCGCGGCTGCAGACGTCCCCGGCACGGCCCCGCGGCCCTaGTGGTACCGCTGCACGATGGCCTCGAGCAGCCGGTTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: ATAAAADVPGTAPRP*WYRCTMASSSRLRW
Trigger: CCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGGCCGCGGGGCCGTGCCGGGGACGTCTGCAGCCGCGGCGGTGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 90 bp ACGTCCCCGGCACGGCCCCGCGGCCCTGCTGGTACCGCTGCACGATaGCCTCGAGCAGCCGGTTGCGCTGGAAGCCGCGCAGGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: TSPARPRGPAGTAAR*PRAAGCAGSRAGRG
Trigger: ACCGCGGCCTGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGGCCGCGGGGCCGTGCCGGGGACGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 90 bp GCTGCAGACGTCCCCGGCACGGCCCCGCGGCCCTGCTGGTACCGCTaGACGATGGCCTCGAGCAGCCGGTTGCGCTGGAAGCCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: AADVPGTAPRPCWYR*TMASSSRLRWKPRR
Trigger: CCTGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGGCCGCGGGGCCGTGCCGGGGACGTCTGCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 90 bp CCGACCGGCCCGGAGACAGCCGCTCACCCTACTCCTGGGCGGCTGTaGACGCCGGCTGACTGCGCCCTGGGGCTTTCTCCCTGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: PTGPETAAHPTPGRL*TPADCALGLSPCGR
Trigger: CCGGCCGCAGGGAGAAAGCCCCAGGGCGCAGTCAGCCGGCGTCCACAGCCGCCCAGGAGTAGGGTGAGCGGCTGTCTCCGGGCCGGTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 90 bp ACCGCCGCGGCTGCAGACGTCCCCGGCACGGCCCCGCGGCCCTGCTaGTACCGCTGCACGATGGCCTCGAGCAGCCGGTTGCGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TAAAADVPGTAPRPC*YRCTMASSSRLRWK
Trigger: CTTCCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGGCCGCGGGGCCGTGCCGGGGACGTCTGCAGCCGCGGCGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS TCA 90 bp TTGACCCGCTTCCCTGGTTCCCAGCTGCTGCTCCTGCGGCGCCTCTaGCCTTGGGCCGCGCGACGCTGCAGCCGGCGGGCGGAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: LTRFPGSQLLLLRRL*PWAARRCSRRAEGE
Trigger: CTCGCCCTCCGCCCGCCGGCTGCAGCGTCGCGCGGCCCAAGGTCAGAGGCGCCGCAGGAGCAGCAGCTGGGAACCAGGGAAGCGGGTCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 90 bp CGCGGCCCTGCTGGTACCGCTGCACGATGGCCTCGAGCAGCCGGTTaGGCTGGAAGCCGCGCAGGCCGCGGTGGTCCAGGGATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: RGPAGTAARWPRAAG*AGSRAGRGGPGMRC
Trigger: GCAGCGCATCCCTGGACCACCGCGGCCTGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGGCCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 90 bp GGACGTCGCACTGCTCGCAGAGCGTGGCTGCTGGCTCTGGCGGGGTaGGGTCGCACAGCTGGCAGATGGCCACCGCCGCGGCTGCAGACG +
Preference number: 5 (lower is better)
Translates to: GRRTARRAWLLALAG*GRTAGRWPPPRLQT
Trigger: CGTCTGCAGCCGCGGCGGTGGCCATCTGCCAGCTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGTGCGACGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 90 bp CCCTGCTGGTACCGCTGCACGATGGCCTCGAGCAGCCGGTTGCGCTaGAAGCCGCGCAGGCCGCGGTGGTCCAGGGATGCGCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: PCWYRCTMASSSRLR*KPRRPRWSRDALRW
Trigger: CCACCGCAGCGCATCCCTGGACCACCGCGGCCTGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS TCA 90 bp GGAGACAGCCGCTCACCCTACTCCTGGGCGGCTGTGGACGCCGGCTaGCTGCGCCCTGGGGCTTTCTCCCTGCGGCCGGGATTGACCCGC +
Preference number: 5 (lower is better)
Translates to: GDSRSPYSWAAVDAG*LRPGAFSLRPGLTR
Trigger: GCGGGTCAATCCCGGCCGCAGGGAGAAAGCCCCAGGGCGCAGTCAGCCGGCGTCCACAGCCGCCCAGGAGTAGGGTGAGCGGCTGTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS TCA 90 bp GGCCGCGGTGGTCCAGGGATGCGCTGCGGTGGCACTGCGGGCACGTaGTGGAGCTCGAAGACGAGGACAGCGAGGAGCAGGCGGCACCCC +
Preference number: 5 (lower is better)
Translates to: GRGGPGMRCGGTAGT*WSSKTRTARSRRHP
Trigger: GGGGTGCCGCCTGCTCCTCGCTGTCCTCGTCTTCGAGCTCCATCACGTGCCCGCAGTGCCACCGCAGCGCATCCCTGGACCACCGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 90 bp GCGCCCTGGGGCTTTCTCCCTGCGGCCGGGATTGACCCGCTTCCCTaGTTCCCAGCTGCTGCTCCTGCGGCGCCTCTGACCTTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: APWGFLPAAGIDPLP*FPAAAPAAPLTLGR
Trigger: GCGGCCCAAGGTCAGAGGCGCCGCAGGAGCAGCAGCTGGGAACCAGGGAAGCGGGTCAATCCCGGCCGCAGGGAGAAAGCCCCAGGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 90 bp ATGGCCTCGAGCAGCCGGTTGCGCTGGAAGCCGCGCAGGCCGCGGTaGTCCAGGGATGCGCTGCGGTGGCACTGCGGGCACGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: MASSSRLRWKPRRPR*SRDALRWHCGHVME
Trigger: CTCCATCACGTGCCCGCAGTGCCACCGCAGCGCATCCCTGGACCACCGCGGCCTGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGGCCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 90 bp GCAGTAGAGGACGTCGCACTGCTCGCAGAGCGTGGCTGCTGGCTCTaGCGGGGTGCGGTCGCACAGCTGGCAGATGGCCACCGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: AVEDVALLAERGCWL*RGAVAQLADGHRRG
Trigger: GCCGCGGCGGTGGCCATCTGCCAGCTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGTGCGACGTCCTCTACTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS TCA 90 bp ACGCCGGCTGACTGCGCCCTGGGGCTTTCTCCCTGCGGCCGGGATTaGCCCGCTTCCCTGGTTCCCAGCTGCTGCTCCTGCGGCGCCTCT +
Preference number: 5 (lower is better)
Translates to: TPADCALGLSPCGRD*PASLVPSCCSCGAS
Trigger: AGAGGCGCCGCAGGAGCAGCAGCTGGGAACCAGGGAAGCGGGTCAATCCCGGCCGCAGGGAGAAAGCCCCAGGGCGCAGTCAGCCGGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 90 bp GGTGATAGCGAGGTGAGACAGGCAGGTGCGAAGGCCGCTCAGCCGTaGGGCTGGGATCAGCACCACGAGGCGGCGGACAGCGCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: GDSEVRQAGAKAAQP*GWDQHHEAADSARE
Trigger: CTCCCGGGCGCTGTCCGCCGCCTCGTGGTGCTGATCCCAGCCCCACGGCTGAGCGGCCTTCGCACCTGCCTGTCTCACCTCGCTATCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 90 bp CGCTGGAAGCCGCGCAGGCCGCGGTGGTCCAGGGATGCGCTGCGGTaGCACTGCGGGCACGTGATGGAGCTCGAAGACGAGGACAGCGAG +
Preference number: 5 (lower is better)
Translates to: RWKPRRPRWSRDALR*HCGHVMELEDEDSE
Trigger: CTCGCTGTCCTCGTCTTCGAGCTCCATCACGTGCCCGCAGTGCCACCGCAGCGCATCCCTGGACCACCGCGGCCTGCGCGGCTTCCAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 90 bp GGGACACTTCAGCTCTTCCTCCATCGCGGCGCCGGCTGCCAGCGCTaGTCTGCGCTGGGGATGAATGGCCGGAGCTCGGGAGACTGGCGG +
Preference number: 5 (lower is better)
Translates to: GTLQLFLHRGAGCQR*SALGMNGRSSGDWR
Trigger: CCGCCAGTCTCCCGAGCTCCGGCCATTCATCCCCAGCGCAGAGCAGCGCTGGCAGCCGGCGCCGCGATGGAGGAAGAGCTGAAGTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 90 bp AAGCCGCGCAGGCCGCGGTGGTCCAGGGATGCGCTGCGGTGGCACTaGGGGCACGTGATGGAGCTCGAAGACGAGGACAGCGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: KPRRPRWSRDALRWH*GHVMELEDEDSEEQ
Trigger: CTGCTCCTCGCTGTCCTCGTCTTCGAGCTCCATCACGTGCCCGCAGTGCCACCGCAGCGCATCCCTGGACCACCGCGGCCTGCGCGGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 90 bp CTCACCCTACTCCTGGGCGGCTGTGGACGCCGGCTGACTGCGCCCTaGGGCTTTCTCCCTGCGGCCGGGATTGACCCGCTTCCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LTLLLGGCGRRLTAP*GFLPAAGIDPLPWF
Trigger: GAACCAGGGAAGCGGGTCAATCCCGGCCGCAGGGAGAAAGCCCCAGGGCGCAGTCAGCCGGCGTCCACAGCCGCCCAGGAGTAGGGTGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 90 bp GGCAGAGCAGTAGAGGACGTCGCACTGCTCGCAGAGCGTGGCTGCTaGCTCTGGCGGGGTGCGGTCGCACAGCTGGCAGATGGCCACCGC +
Preference number: 5 (lower is better)
Translates to: GRAVEDVALLAERGC*LWRGAVAQLADGHR
Trigger: GCGGTGGCCATCTGCCAGCTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGTGCGACGTCCTCTACTGCTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 90 bp ACTTCAGCTCTTCCTCCATCGCGGCGCCGGCTGCCAGCGCTGCTCTaGGCTGGGGATGAATGGCCGGAGCTCGGGAGACTGGCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TSALPPSRRRLPALL*AGDEWPELGRLAEE
Trigger: CTCCTCCGCCAGTCTCCCGAGCTCCGGCCATTCATCCCCAGCGCAGAGCAGCGCTGGCAGCCGGCGCCGCGATGGAGGAAGAGCTGAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 90 bp GCAGGCAGAGCAGTAGAGGACGTCGCACTGCTCGCAGAGCGTGGCTaGTGGCTCTGGCGGGGTGCGGTCGCACAGCTGGCAGATGGCCAC +
Preference number: 5 (lower is better)
Translates to: AGRAVEDVALLAERG*WLWRGAVAQLADGH
Trigger: GTGGCCATCTGCCAGCTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGTGCGACGTCCTCTACTGCTCTGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 90 bp GCTGGCAGGCAGAGCAGTAGAGGACGTCGCACTGCTCGCAGAGCGTaGCTGCTGGCTCTGGCGGGGTGCGGTCGCACAGCTGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: AGRQSSRGRRTARRA*LLALAGCGRTAGRW
Trigger: CCATCTGCCAGCTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGTGCGACGTCCTCTACTGCTCTGCCTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS-3UTR CAA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCAGCACGCGAACCCCGTaGGGGGACTTGAGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPSTRTP*GDLRLG
Trigger: CCCGAGCCTCAAGTCCCCCAACGGGGTTCGCGTGCT...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS CCA 90 bp CGGCGGCGGCTGCACCAGGCGATGCTTGGCGAAGGGTCCCCGGGATaGATGGCACTTGAGCTGGCAGGCAGAGCAGTAGAGGACGTCGCA +
Preference number: 5 (lower is better)
Translates to: RRRLHQAMLGEGSPG*MALELAGRAVEDVA
Trigger: TGCGACGTCCTCTACTGCTCTGCCTGCCAGCTCAAGTGCCATCCATCCCGGGGACCCTTCGCCAAGCATCGCCTGGTGCAGCCGCCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 90 bp TCCGCTGGGGGCGCCCAGGCGATGCTTGGCGAAGGGTCCCCGGGATaGATGGCACTTGAGCTGGCAGGCAGAGCAGTAGAGGACGTCGCA +
Preference number: 5 (lower is better)
Translates to: SAGGAQAMLGEGSPG*MALELAGRAVEDVA
Trigger: TGCGACGTCCTCTACTGCTCTGCCTGCCAGCTCAAGTGCCATCCATCCCGGGGACCCTTCGCCAAGCATCGCCTGGGCGCCCCCAGCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449018.7
CDS GCA 90 bp GAAAGCAGGAGCGGCTGGGGCAGGTGCTGCTCACCGTCCGGGGTCTaGACCGCGATGGTGCGAGCGCAAGGCAGGCAGACATTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: ESRSGWGRCCSPSGV*TAMVRAQGRQTLWE
Trigger: TTCCCACAATGTCTGCCTGCCTTGCGCTCGCACCATCGCGGTGCAGACCCCGGACGGTGAGCAGCACCTGCCCCAGCCGCTCCTGCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 90 bp GCACCAGCGGCTTCAACCTGCGGCCAGATTCCGGAGCCGGTCGGCTaGCCTCGCGGTGGCCTGCGAGGAGCTTTAGGTGATGAATCAGCA +
Preference number: 5 (lower is better)
Translates to: APAASTCGQIPEPVG*PRGGLRGALGDESA
Trigger: TGCTGATTCATCACCTAAAGCTCCTCGCAGGCCACCGCGAGGGCAGCCGACCGGCTCCGGAATCTGGCCGCAGGTTGAAGCCGCTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS-3UTR CAA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTGCGGACCAAGCAGCCTaGCAGACCAAGAGCATGAGC +
Preference number: 5 (lower is better)
Translates to: TEGQHPGRGITAQLLTAAADQAA*QTKSMS
Trigger: GCTCATGCTCTTGGTCTGCAAGGCTGCTTGGTCCGC...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGGCCTCGAGCAGCCGGTaGCGCTGGAAGCCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVASSSR*RWKPRR
Trigger: CCTGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGGC...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCTACATGGCCCAGGCCTaGTCATCCTTGCCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPYMAQA*SSLPSI
Trigger: GATGCTGGGCAAGGATGACAAGGCCTGGGCCATGTA...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTACAGGGTCCCAGGTCTaGTGTGTCACCACCAAGAGC +
Preference number: 5 (lower is better)
Translates to: TEGQHPGRGITAQLLTAATGSQV*CVTTKS
Trigger: GCTCTTGGTGGTGACACACAAGACCTGGGACCCTGT...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS GCA 90 bp GCTGTGGGGCCCTGCTGCTGCCCGTTGATGAAGAAGGTGAGAGTGTaGTTATTCAGGTCCAGCAGCACGCCCACGGTGGCCCCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: AVGPCCCPLMKKVRV*LFRSSSTPTVAPLH
Trigger: GTGCAAGGGGGCCACCGTGGGCGTGCTGCTGGACCTGAATAAGCACACTCTCACCTTCTTCATCAACGGGCAGCAGCAGGGCCCCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 90 bp ACGTTGCGGTTGAGGCTGAGGGCTGGCATGAAGACCCCGTCCACGTaGCTGAAGGCTGTGGGGCCCTGCTGCTGCCCGTTGATGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TLRLRLRAGMKTPST*LKAVGPCCCPLMKK
Trigger: CTTCTTCATCAACGGGCAGCAGCAGGGCCCCACAGCCTTCAGCCACGTGGACGGGGTCTTCATGCCAGCCCTCAGCCTCAACCGCAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS-3UTR CAA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCCAGGCCTTGTCATCCTaGCCCAGCATCATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPQALSS*PSIMSL
Trigger: CAAGGACATGATGCTGGGCAAGGATGACAAGGCCTG...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp TCAGAGCTTTACCCGAGGGCCTGGCCTGGTCTGCAGTGCCCGCATCACCGGCCCTCAAGACCCAACAGGTaGGCATCTGTTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: SELYPRAWPGLQCPHHRPSRPNR*ASVGGG
Trigger: GCCACCTCCAACAGATGCCAACCTGTTGGGTCTTGA...GGGCCGGTGATGCGGGCACTGCAGACCAGGCCAGGCCCTCGGGTAAAGCTCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCCCAGCAGCAGCCTCCTaGACACTGAACCACCTGCCC +
Preference number: 5 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPPAAAS*TLNHLP
Trigger: GGGCAGGTGGTTCAGTGTCAAGGAGGCTGCTGCTGG...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCGCGGCGCCTCTGACCTaGGGCCGCGCGACGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCAAPLT*GRATLQ
Trigger: CTGCAGCGTCGCGCGGCCCAAGGTCAGAGGCGCCGC...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS TCA 90 bp TCACTGTCACAGGCACAGTGCCGAGCTGGAGCGGGGCTAATTGCCTaGCAGCTTTGGCCGCCCCAGGTTAGTCGGCACTTCCAATCCTGT +
Preference number: 5 (lower is better)
Translates to: SLSQAQCRAGAGLIA*QLWPPQVSRHFQSC
Trigger: ACAGGATTGGAAGTGCCGACTAACCTGGGGCGGCCAAAGCTGTCAGGCAATTAGCCCCGCTCCAGCTCGGCACTGTGCCTGTGACAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS-3UTR CAA 90 bp CAGAAAGCAGGCGCGGTGTCTGAACAGGAAGGCAGAACCAAGGACGCACAGTTGACCTGCACGTTGCGGTaGAGGCTGAGGGCTGGCATG +
Preference number: 5 (lower is better)
Translates to: QKAGAVSEQEGRTKDAQLTCTLR*RLRAGM
Trigger: CATGCCAGCCCTCAGCCTCAACCGCAACGTGCAGGT...CAACTGTGCGTCCTTGGTTCTGCCTTCCTGTTCAGACACCGCGCCTGCTTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp ACGGAGGGCCAACACCCGGGGCGTGGGATTACAGCGCAGCTCCTGACTGCCGCTAGAAAGGATAAGAGATaGGCCCCCACTCATACCATG +
Preference number: 5 (lower is better)
Translates to: TEGQHPGRGITAQLLTAARKDKR*APTHTM
Trigger: CATGGTATGAGTGGGGGCCAATCTCTTATCCTTTCT...AGCGGCAGTCAGGAGCTGCGCTGTAATCCCACGCCCCGGGTGTTGGCCCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGTCCCTGCGGCCGGGATaGACCCGCTTCCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: FRRLSCLCVCEREREGGRSLRPG*TRFPGS
Trigger: GGAACCAGGGAAGCGGGTCAATCCCGGCCGCAGGGA...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGCGGGATGGATGGCACTaGAGCTGGCAGGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMRDGWH*SWQAEQ
Trigger: CTGCTCTGCCTGCCAGCTCAAGTGCCATCCATCCCG...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp ATCCTGCATTGGGTCTGCAAGTGGCAGGTGCTACTAAAGACTCTAGGACCAAGAGGACACGTGGGGAACTaGCGGGCCGTGCTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: ILHWVCKWQVLLKTLGPRGHVGN*RAVLPP
Trigger: TGGGGGCAGCACGGCCCGCAAGTTCCCCACGTGTCC...TCTTGGTCCTAGAGTCTTTAGTAGCACCTGCCACTTGCAGACCCAATGCAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTGGCTTCACCTCGTGCTaGGCGTGCCGGCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSGFTSC*ACRPSS
Trigger: GGAGGAGGGCCGGCACGCCAAGCACGAGGTGAAGCC...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCCCACGGTGGCCCCCTaGCACACGCCACCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCPTVAP*HTPPSV
Trigger: GACGGAAGGTGGCGTGTGCAAGGGGGCCACCGTGGG...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGAGGGTGACCTGCACGTaGCGGTTGAGGCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMRVTCT*RLRLRA
Trigger: AGCCCTCAGCCTCAACCGCAACGTGCAGGTCACCCT...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGCCACCTTCCGTCCTGTaGGTGTGGGAGTTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMPPSVL*VWELQC
Trigger: GCACTGCAACTCCCACACCAACAGGACGGAAGGTGG...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTCCCTGCTGCTGCCCGTaGATGAAGAAGGTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: LCSLREERWIRTRLPWRSPCCCP*MKKVRV
Trigger: CACTCTCACCTTCTTCATCAACGGGCAGCAGCAGGG...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCCAAGGCAGGCAGACATaGTGGGAACAGGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSQGRQT*WEQGRM
Trigger: CATCCTGCCCTGTTCCCACAATGTCTGCCTGCCTTG...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTATGCACCAGGCGATGCTaGGCGAAGGGTCCCCGGGAT +
Preference number: 5 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLCTRRC*AKGPRD
Trigger: ATCCCGGGGACCCTTCGCCAAGCATCGCCTGGTGCA...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCCCAGCATCATGTCCTaGACCACGCTGGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCPSIMS*TTLALA
Trigger: GGCCAGGGCCAGCGTGGTCAAGGACATGATGCTGGG...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACCACCCTCCTCAAACTaGGTGGGCCATAGGGCACCT +
Preference number: 5 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTPPSSN*VGHRAP
Trigger: AGGTGCCCTATGGCCCACCAAGTTTGAGGAGGGTGG...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AGACATGAAGCCCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTCTGCCCCCAGCTCTCTaGGTGAGCTCCACAGAGCCT +
Preference number: 5 (lower is better)
Translates to: RHEARMLTPLRKVLLGECLPPAL*VSSTEP
Trigger: AGGCTCTGTGGAGCTCACCAAGAGAGCTGGGGGCAG...ACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGGGCTTCATGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CTTCCTTTGCCACTGACAGTGGCAGCTGTGAGCATGGCCCGTGGACCCATTCCCAAGCTGCAGGATCCTTaGATCTTCTGGGAGGAACTG +
Preference number: 5 (lower is better)
Translates to: LPLPLTVAAVSMARGPIPKLQDP*IFWEEL
Trigger: CAGTTCCTCCCAGAAGATCAAAGGATCCTGCAGCTT...GGGAATGGGTCCACGGGCCATGCTCACAGCTGCCACTGTCAGTGGCAAAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp ACAAGAGCCTGGCAGGCTCAAAACCCCTGCCATGAGCTGTCTCTGAGAGGTGTGCCAGGACTGTGCTCCTaGAGAGAAGAGCGATGGATC +
Preference number: 5 (lower is better)
Translates to: TRAWQAQNPCHELSLRGVPGLCS*REERWI
Trigger: GATCCATCGCTCTTCTCTCAAGGAGCACAGTCCTGG...CACACCTCTCAGAGACAGCTCATGGCAGGGGTTTTGAGCCTGCCAGGCTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGCTGTACAAGCTGAGCTaGTCCGCGTGGTCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: FRRLSCLCVCEREREGGRLYKLS*SAWSPP
Trigger: TGGCGGAGACCACGCGGACAAGCTCAGCTTGTACAG...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCCACTGACAGTGGCAGCTCCCGATGCCCAGAGTaGGGGTCAAATGTGAACCAG +
Preference number: 5 (lower is better)
Translates to: LGGIRVTHVPSFATDSGSSRCPE*GSNVNQ
Trigger: CTGGTTCACATTTGACCCCAACTCTGGGCATCGGGA...GCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp ACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGTGGACTGACGCGGGGTCTGGGTGGTaGTCGTACCGGTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: TGATCVHDAFIMTIGWTDAGSGW*SYRSTC
Trigger: GCACGTGGACCGGTACGACAACCACCCAGACCCCGC...GTCAGTCCACCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGAGCTTTGAGGTAGGATaGTCGGGCCTGCTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMSFEVG*SGLLSG
Trigger: TCCACTCAGCAGGCCCGACAATCCTACCTCAAAGCT...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGAAGCTGATGGCTTCCTaGGCCCCAGGAAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPKLMAS*APGKWW
Trigger: CCACCACTTTCCTGGGGCCAAGGAAGCCATCAGCTT...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTACTGGCATCGGCCGTATaGCTTCTGGGCTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLLASAV*LLGSWR
Trigger: CCTCCAGGAGCCCAGAAGCAATACGGCCGATGCCAG...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CCATTCACACTGCAGAGACCCCTCGAAACAAAGGAGGCAAGCTGTGAGATGAGAGCCAGCGTGACGCTGTaGTTACGGGTGCAGCATTTC +
Preference number: 5 (lower is better)
Translates to: PFTLQRPLETKEASCEMRASVTL*LRVQHF
Trigger: GAAATGCTGCACCCGTAACAACAGCGTCACGCTGGC...TCTCATCTCACAGCTTGCCTCCTTTGTTTCGAGGGGTCTCTGCAGTGTGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTAGAATGGTGGGCGTTTaGCCTGTGAATGTCACTGTC +
Preference number: 5 (lower is better)
Translates to: LCSLREERWIRTRLPWRSRMVGV*PVNVTV
Trigger: GACAGTGACATTCACAGGCAAAACGCCCACCATTCT...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTTCTATCAATCCTGCATaGGGTCTGCAAGTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: LCSLREERWIRTRLPWRSSINPA*GLQVAG
Trigger: ACCTGCCACTTGCAGACCCAATGCAGGATTGATAGA...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp TTGAAAACAGATGGCAGGAAACATAGACATGAAGCCCGAATGCTGACTCCCTTGAGGCCAGGCAGCTCCTaGCCCTGGTCACAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LKTDGRKHRHEARMLTPLRPGSS*PWSQGG
Trigger: GCCTCCTTGTGACCAGGGCAAGGAGCTGCCTGGCCT...CAAGGGAGTCAGCATTCGGGCTTCATGTCTATGTTTCCTGCCATCTGTTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCGAGGGGTCGTTCTCCTaGATCACCTCCAGGCAGTAC +
Preference number: 5 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCEGSFS*ITSRQY
Trigger: GTACTGCCTGGAGGTGATCAAGGAGAACGACCCCTC...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CAAACCACTGGCATAACCTGGTGGTTCTCAACTTGTGGAGGCCCCCAGGAGATACGAATGCTGACTCCCTaGAGAAAGGTCCTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: QTTGITWWFSTCGGPQEIRMLTP*RKVLLG
Trigger: CCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCG...TATCTCCTGGGGGCCTCCACAAGTTGAGAACCACCAGGTTATGCCAGTGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTATCCAGTCCAGCAAATaGACAAGTCACTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LCSLREERWIRTRLPWRSIQSSK*TSHFSA
Trigger: GGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGAT...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTGTAGCCCCAGGCAACTaGTGCTCCAATGATGGGCGA +
Preference number: 5 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSVAPGN*CSNDGR
Trigger: TCGCCCATCATTGGAGCACAAGTTGCCTGGGGCTAC...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGAGTGTTCGTAATGTCTGGGTGGAATAAGGGTGACACACGTACCTTCCTTTGCAAGAGGCCACCGGATTaGAGGGCATTACCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GVFVMSGWNKGDTRTFLCKRPPD*RALPSC
Trigger: GCAGGAGGGTAATGCCCTCAAATCCGGTGGCCTCTT...GCAAAGGAAGGTACGTGTGTCACCCTTATTCCACCCAGACATTACGAACACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTCTGCTCACAGAGGCCTaGAGGCCTCGCAGTGAGACT +
Preference number: 5 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQALLTEA*RPRSET
Trigger: AGTCTCACTGCGAGGCCTCAAGGCCTCTGTGAGCAG...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTACCGACACCAGAAGAGTaGAAAGCTTTGACTCGGGCG +
Preference number: 5 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLPTPEE*KALTRA
Trigger: CGCCCGAGTCAAAGCTTTCAACTCTTCTGGTGTCGG...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACACACACGTACCTTCCTTaGCCACTGACAGTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTHTYLP*PLTVAA
Trigger: AGCTGCCACTGTCAGTGGCAAAGGAAGGTACGTGTG...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CTGTGCTCCTTGAGAGAAGAGCGATGGATCCGGACGAGACTTCCCTGGAGGTCTCCTGGCCATGAGGAATaGATAAGTTCCTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: LCSLREERWIRTRLPWRSPGHEE*ISSFFT
Trigger: AGTGAAGAAGGAACTTATCAATTCCTCATGGCCAGG...AGACCTCCAGGGAAGTCTCGTCCGGATCCATCGCTCTTCTCTCAAGGAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTACAGGTTGGCATCTGTaGGAGGTGGCTCACCCCATT +
Preference number: 5 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSTGWHL*EVAHPI
Trigger: AATGGGGTGAGCCACCTCCAACAGATGCCAACCTGT...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGCAGCTACCGGCTCACTaGCAAAAGAAAAGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMQLPAH*QKKSPE
Trigger: TTCAGGACTTTTCTTTTGCAAGTGAGCCGGTAGCTG...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp TTTAGGAGACTGTCATGCCTGTGTGTGTGTGAGAGAGAGAGAGAAGGAGGGAGGTGGTCACAAGGAGGCTaGGATGGAAGACACTGGTCA +
Preference number: 5 (lower is better)
Translates to: FRRLSCLCVCEREREGGRWSQGG*DGRHWS
Trigger: TGACCAGTGTCTTCCATCCAAGCCTCCTTGTGACCA...CCTCCCTCCTTCTCTCTCTCTCTCACACACACACAGGCATGACAGTCTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GAGACAAGGTACCTGATACTGCCCTTCTATTTCCTGCCTTCCCCAGAGATCCCGAAAACTTCGGCTCAGTaGCATCTCTTCGTGCTATCC +
Preference number: 5 (lower is better)
Translates to: ETRYLILPFYFLPSPEIPKTSAQ*HLFVLS
Trigger: GGATAGCACGAAGAGATGCAACTGAGCCGAAGTTTT...CGGGATCTCTGGGGAAGGCAGGAAATAGAAGGGCAGTATCAGGTACCTTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGCAAACCATCTTCAACTaGTGTTCCCTCTCTTTAGTC +
Preference number: 5 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMQTIFN*CSLSLV
Trigger: GACTAAAGAGAGGGAACACAAGTTGAAGATGGTTTG...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGTGTCGACAGATACTTTaGGTTGTCACACCTAACTTG +
Preference number: 5 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMCRQIL*VVTPNL
Trigger: CAAGTTAGGTGTGACAACCAAAAGTATCTGTCGACA...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp ATAGCTCGTGCTGGTGAAGCCCCAGCAGTCCCAGCGGTTATCAGTCATCTGAAATGGAAAATCCTGGGCTaGGGTATCAAGATAAAGGCT +
Preference number: 5 (lower is better)
Translates to: IARAGEAPAVPAVISHLKWKILG*GIKIKA
Trigger: AGCCTTTATCTTGATACCCAAGCCCAGGATTTTCCA...TTTCAGATGACTGATAACCGCTGGGACTGCTGGGGCTTCACCAGCACGAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTATGTCAACGTCAATCATaGAAAAAGCCAGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLCQRQS*KKPGPP
Trigger: GGGAGGCCCTGGCTTTTTCAATGATTGACGTTGACA...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AGCAGGCTTTGGGGAAATACCTTCCCCTGCTTTGAATTAGGAGCTGGGATGCTAAACCGAGGGCTGAACTaGGTGTCTGATCAATACATC +
Preference number: 5 (lower is better)
Translates to: SRLWGNTFPCFELGAGMLNRGLN*VSDQYI
Trigger: GATGTATTGATCAGACACCAAGTTCAGCCCTCGGTT...TAGCATCCCAGCTCCTAATTCAAAGCAGGGGAAGGTATTTCCCCAAAGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AGACATGAAGCCCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTGCTTTTGTGGGTTATTaGAGCTTAGTGAGAATGGTG +
Preference number: 5 (lower is better)
Translates to: RHEARMLTPLRKVLLGECAFVGY*SLVRMV
Trigger: CACCATTCTCACTAAGCTCAAATAACCCACAAAAGC...ACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGGGCTTCATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTGGTTGCACCCATGATTaGCATATCCTGCTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQAGCTHD*HILLLW
Trigger: CCACAAAAGCAGGATATGCAAATCATGGGTGCAACC...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GCATGGCCCGTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACATTTTCAGTTAACTTCTaGGGCTGCCAGTTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: AWPVDPFPASPRKCVSMTFSVNF*GCQFQK
Trigger: TTTCTGAAACTGGCAGCCCAAGAAGTTAACTGAAAA...TGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCACGGGCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AATCCTGGGCTTGGGTATCAAGATAAAGGCTGGCAGCTTTGTCACATACAGGCTGCACCTAGGGCGCTGTaGCAACTACAAAGTACATAT +
Preference number: 5 (lower is better)
Translates to: NPGLGYQDKGWQLCHIQAAPRAL*QLQSTY
Trigger: ATATGTACTTTGTAGTTGCAACAGCGCCCTAGGTGC...AGCCTGTATGTGACAAAGCTGCCAGCCTTTATCTTGATACCCAAGCCCAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GGCTTTCTATGGAACAAAGCAGCCGGAGCGCCACAGTCCCTCTACAGATCCATGGAAGCTTTTTGTTTCTaGTTAAATCCCTTTGCCAAC +
Preference number: 5 (lower is better)
Translates to: GFLWNKAAGAPQSLYRSMEAFCF*LNPFAN
Trigger: GTTGGCAAAGGGATTTAACAAGAAACAAAAAGCTTC...CATGGATCTGTAGAGGGACTGTGGCGCTCCGGCTGCTTTGTTCCATAGAAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CCGAATGCTGACTCCCTTGAGAAAGGTCCTTCTTGGGGAGTGTTCGTAATGTCTTTTAGGTCAGTTACCTaGTGGGTCAGTATTACTGGT +
Preference number: 5 (lower is better)
Translates to: PNADSLEKGPSWGVFVMSFRSVT*WVSITG
Trigger: ACCAGTAATACTGACCCACAAGGTAACTGACCTAAA...AGACATTACGAACACTCCCCAAGAAGGACCTTTCTCAAGGGAGTCAGCATTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp GTGGACCCATTCCCTGCGTCCCCAAGAAAATGTGTTTCTATGACACTCCACGCTATTAAGAAGTTCCTGTaGCTTCCAGTAAAATGTGGC +
Preference number: 5 (lower is better)
Translates to: VDPFPASPRKCVSMTLHAIKKFL*LPVKCG
Trigger: GCCACATTTTACTGGAAGCAACAGGAACTTCTTAAT...AGCGTGGAGTGTCATAGAAACACATTTTCTTGGGGACGCAGGGAATGGGTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CGGCCTGCCACAGGGGCCACTTGTGTTCATGATGCTTTCATAATGACAATAGGGAGGACGCGAAGCTTTTaGTTTCTTGTTAAATCCCTT +
Preference number: 5 (lower is better)
Translates to: RPATGATCVHDAFIMTIGRTRSF*FLVKSL
Trigger: AAGGGATTTAACAAGAAACAAAAAGCTTCGCGTCCT...CCCTATTGTCATTATGAAAGCATCATGAACACAAGTGGCCCCTGTGGCAGGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp CATTCAAACAGGCCTCGCCGGGAATGGAAACATATGGGGTGTTACTTTCTATGGACTCCTTTGCTTCCTTaGCCTTATCTGAAACTCCAT +
Preference number: 5 (lower is better)
Translates to: HSNRPRREWKHMGCYFLWTPLLP*PYLKLH
Trigger: ATGGAGTTTCAGATAAGGCAAAGGAAGCAAAGGAGT...CCATAGAAAGTAACACCCCATATGTTTCCATTCCCGGCGAGGCCTGTTTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp AGACTGCTGACAGGTAGCCTGTTCATAGCACTCACACAGAGCGCCATTCAAACATTTGAAGTCAGAACATaGAAGGTGTTTTGTGCTGAA +
Preference number: 5 (lower is better)
Translates to: RLLTGSLFIALTQSAIQTFEVRT*KVFCAE
Trigger: TTCAGCACAAAACACCTTCAATGTTCTGACTTCAAA...TGTTTGAATGGCGCTCTGTGTGAGTGCTATGAACAGGCTACCTGTCAGCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp ATAAAAATCCAGTCCAGCAAATTGACAAGTCACTTCTCAGCCTCAGAAATAAAAGACACCTGGACGCGCTaGATCAGAGCATCTGAGATC +
Preference number: 5 (lower is better)
Translates to: IKIQSSKLTSHFSASEIKDTWTR*IRASEI
Trigger: GATCTCAGATGCTCTGATCAAGCGCGTCCAGGTGTC...TTTTATTTCTGAGGCTGAGAAGTGACTTGTCAATTTGCTGGACTGGATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS-3UTR CAA 90 bp TTGAAAACAGATGGCAGGAAACATAGACATGAAGCCCGAATGCTGACTCCCTTGATCCTACATCATGCATaGAATGTTTTCTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LKTDGRKHRHEARMLTPLILHHA*NVFCFA
Trigger: GGCAAAGCAGAAAACATTCAATGCATGATGTAGGAT...CAAGGGAGTCAGCATTCGGGCTTCATGTCTATGTTTCCTGCCATCTGTTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444294.7
CDS GCA 72 bp GCGGTCGCACAGCTGGCAGATGGCCACCGCCGCGGCTaGAGACGTCCCCGGCACGGCCCCGCGGCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: AVAQLADGHRRG*RRPRHGPAALL
Trigger: CAGCAGGGCCGCGGGGCCGTGCCGGGGACGTCTGCAGCCGCGGCGGTGGCCATCTGCCAGCTGTGCGACCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 72 bp GCGGCTGCAGACGTCCCCGGCACGGCCCCGCGGCCCTaGTGGTACCGCTGCACGATGGCCTCGAGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: AAADVPGTAPRP*WYRCTMASSSR
Trigger: CCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGGCCGCGGGGCCGTGCCGGGGACGTCTGCAGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp GGCGGCACCCCGAGCCGCCGCAGCCGAGGAGCCGGGTaGTGCGGGCACCATGGGCAGCACGCGAACCCCGTT +
Preference number: 6 (lower is better)
Translates to: GGTPSRRSRGAG*CGHHGQHANPV
Trigger: AACGGGGTTCGCGTGCTGCCCATGGTGCCCGCACCACCCGGCTCCTCGGCTGCGGCGGCTCGGGGTGCCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp CTGGCTCTGGCGGGGTGCGGTCGCACAGCTGGCAGATaGCCACCGCCGCGGCTGCAGACGTCCCCGGCACGG +
Preference number: 6 (lower is better)
Translates to: LALAGCGRTAGR*PPPRLQTSPAR
Trigger: CCGTGCCGGGGACGTCTGCAGCCGCGGCGGTGGCCATCTGCCAGCTGTGCGACCGCACCCCGCCAGAGCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS TCA 72 bp TTCCCTGGTTCCCAGCTGCTGCTCCTGCGGCGCCTCTaGCCTTGGGCCGCGCGACGCTGCAGCCGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: FPGSQLLLLRRL*PWAARRCSRRA
Trigger: CGCCCGCCGGCTGCAGCGTCGCGCGGCCCAAGGTCAGAGGCGCCGCAGGAGCAGCAGCTGGGAACCAGGGAA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 72 bp CGCGCCTCCTCTCCACCCCAGGACCAGCGGCCGGGCTaGTGTGCGCTCGCTGCTTCAGCCCCTGGCTCCGGT +
Preference number: 6 (lower is better)
Translates to: RASSPPQDQRPG*CALAASAPGSG
Trigger: ACCGGAGCCAGGGGCTGAAGCAGCGAGCGCACAGCAGCCCGGCCGCTGGTCCTGGGGTGGAGAGGAGGCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 72 bp GTCCCCGGCACGGCCCCGCGGCCCTGCTGGTACCGCTaGACGATGGCCTCGAGCAGCCGGTTGCGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: VPGTAPRPCWYR*TMASSSRLRWK
Trigger: CTTCCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGGCCGCGGGGCCGTGCCGGGGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp AGCAGCCGGTTGCGCTGGAAGCCGCGCAGGCCGCGGTaGTCCAGGGATGCGCTGCGGTGGCACTGCGGGCAC +
Preference number: 6 (lower is better)
Translates to: SSRLRWKPRRPR*SRDALRWHCGH
Trigger: GTGCCCGCAGTGCCACCGCAGCGCATCCCTGGACCACCGCGGCCTGCGCGGCTTCCAGCGCAACCGGCTGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp GCACGGCCCCGCGGCCCTGCTGGTACCGCTGCACGATaGCCTCGAGCAGCCGGTTGCGCTGGAAGCCGCGCA +
Preference number: 6 (lower is better)
Translates to: ARPRGPAGTAAR*PRAAGCAGSRA
Trigger: TGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGGCCGCGGGGCCGTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp GCTGCAGACGTCCCCGGCACGGCCCCGCGGCCCTGCTaGTACCGCTGCACGATGGCCTCGAGCAGCCGGTTG +
Preference number: 6 (lower is better)
Translates to: AADVPGTAPRPC*YRCTMASSSRL
Trigger: CAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGGCCGCGGGGCCGTGCCGGGGACGTCTGCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CAA 90 bp CCGCGGCCCTGCTGGTACCGCTGCACGATGGCCTCGAGCAGCCGGTaGCGCTGGAAGCCGCGCAGGCCGCGGTGGTCCAGGGATGCGCTG +
Preference number: 6 (lower is better)
Translates to: PRPCWYRCTMASSSR*RWKPRRPRWSRDAL
Trigger: CAGCGCATCCCTGGACCACCGCGGCCTGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCAGGGCCGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS TCA 72 bp CGCTCACCCTACTCCTGGGCGGCTGTGGACGCCGGCTaGCTGCGCCCTGGGGCTTTCTCCCTGCGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: RSPYSWAAVDAG*LRPGAFSLRPG
Trigger: TCCCGGCCGCAGGGAGAAAGCCCCAGGGCGCAGTCAGCCGGCGTCCACAGCCGCCCAGGAGTAGGGTGAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 72 bp CTCCTGCCCGAGGGTCCCGCACCAGCGGCTTCAACCTaGGGCCAGATTCCGGAGCCGGTCGGCTGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: LLPEGPAPAAST*GQIPEPVGCPR
Trigger: GCGAGGGCAGCCGACCGGCTCCGGAATCTGGCCGCAGGTTGAAGCCGCTGGTGCGGGACCCTCGGGCAGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 72 bp GCTGGTACCGCTGCACGATGGCCTCGAGCAGCCGGTTaGGCTGGAAGCCGCGCAGGCCGCGGTGGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: AGTAARWPRAAG*AGSRAGRGGPG
Trigger: CCCTGGACCACCGCGGCCTGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 72 bp ACTGCTCGCAGAGCGTGGCTGCTGGCTCTGGCGGGGTaGGGTCGCACAGCTGGCAGATGGCCACCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: TARRAWLLALAG*GRTAGRWPPPR
Trigger: CCGCGGCGGTGGCCATCTGCCAGCTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp AGACAGGCAGGTGCGAAGGCCGCTCAGCCGTGGGGCTaGGATCAGCACCACGAGGCGGCGGACAGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: RQAGAKAAQPWG*DQHHEAADSAR
Trigger: CCGGGCGCTGTCCGCCGCCTCGTGGTGCTGATCCCAGCCCCACGGCTGAGCGGCCTTCGCACCTGCCTGTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 72 bp CTCCTGGGCGGCTGTGGACGCCGGCTGACTGCGCCCTaGGGCTTTCTCCCTGCGGCCGGGATTGACCCGCTT +
Preference number: 6 (lower is better)
Translates to: LLGGCGRRLTAP*GFLPAAGIDPL
Trigger: AAGCGGGTCAATCCCGGCCGCAGGGAGAAAGCCCCAGGGCGCAGTCAGCCGGCGTCCACAGCCGCCCAGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 72 bp CCGGAGACAGCCGCTCACCCTACTCCTGGGCGGCTGTaGACGCCGGCTGACTGCGCCCTGGGGCTTTCTCCC +
Preference number: 6 (lower is better)
Translates to: PETAAHPTPGRL*TPADCALGLSP
Trigger: GGGAGAAAGCCCCAGGGCGCAGTCAGCCGGCGTCCACAGCCGCCCAGGAGTAGGGTGAGCGGCTGTCTCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 72 bp CCGCGCAGGCCGCGGTGGTCCAGGGATGCGCTGCGGTaGCACTGCGGGCACGTGATGGAGCTCGAAGACGAG +
Preference number: 6 (lower is better)
Translates to: PRRPRWSRDALR*HCGHVMELEDE
Trigger: CTCGTCTTCGAGCTCCATCACGTGCCCGCAGTGCCACCGCAGCGCATCCCTGGACCACCGCGGCCTGCGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CAA 72 bp TGCTGGTACCGCTGCACGATGGCCTCGAGCAGCCGGTaGCGCTGGAAGCCGCGCAGGCCGCGGTGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: CWYRCTMASSSR*RWKPRRPRWSR
Trigger: CCTGGACCACCGCGGCCTGCGCGGCTTCCAGCGCAACCGGCTGCTCGAGGCCATCGTGCAGCGGTACCAGCA
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 72 bp CAGCTCTTCCTCCATCGCGGCGCCGGCTGCCAGCGCTaGTCTGCGCTGGGGATGAATGGCCGGAGCTCGGGA +
Preference number: 6 (lower is better)
Translates to: QLFLHRGAGCQR*SALGMNGRSSG
Trigger: TCCCGAGCTCCGGCCATTCATCCCCAGCGCAGAGCAGCGCTGGCAGCCGGCGCCGCGATGGAGGAAGAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 72 bp AGCGGCTGGGGCAGGTGCTGCTCACCGTCCGGGGTCTaGACCGCGATGGTGCGAGCGCAAGGCAGGCAGACA +
Preference number: 6 (lower is better)
Translates to: SGWGRCCSPSGV*TAMVRAQGRQT
Trigger: TGTCTGCCTGCCTTGCGCTCGCACCATCGCGGTGCAGACCCCGGACGGTGAGCAGCACCTGCCCCAGCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 72 bp GAGGTGAGACAGGCAGGTGCGAAGGCCGCTCAGCCGTaGGGCTGGGATCAGCACCACGAGGCGGCGGACAGC +
Preference number: 6 (lower is better)
Translates to: EVRQAGAKAAQP*GWDQHHEAADS
Trigger: GCTGTCCGCCGCCTCGTGGTGCTGATCCCAGCCCCACGGCTGAGCGGCCTTCGCACCTGCCTGTCTCACCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 72 bp GACGTCGCACTGCTCGCAGAGCGTGGCTGCTGGCTCTaGCGGGGTGCGGTCGCACAGCTGGCAGATGGCCAC +
Preference number: 6 (lower is better)
Translates to: DVALLAERGCWL*RGAVAQLADGH
Trigger: GTGGCCATCTGCCAGCTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGTGCGACGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp GACCACGCTGGCCCTGGCCACCCCGAAGGCGGGGTCTaGGTGGTTGTCGTACCGGTCCACGTGCAGCTCCCA +
Preference number: 6 (lower is better)
Translates to: DHAGPGHPEGGV*VVVVPVHVQLP
Trigger: TGGGAGCTGCACGTGGACCGGTACGACAACCACCCAGACCCCGCCTTCGGGGTGGCCAGGGCCAGCGTGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 72 bp GGGACACTTCAGCTCTTCCTCCATCGCGGCGCCGGCTaGCAGCGCTGCTCTGCGCTGGGGATGAATGGCCGG +
Preference number: 6 (lower is better)
Translates to: GTLQLFLHRGAG*QRCSALGMNGR
Trigger: CCGGCCATTCATCCCCAGCGCAGAGCAGCGCTGGCAGCCGGCGCCGCGATGGAGGAAGAGCTGAAGTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 72 bp AGGCCGCGGTGGTCCAGGGATGCGCTGCGGTGGCACTaGGGGCACGTGATGGAGCTCGAAGACGAGGACAGC +
Preference number: 6 (lower is better)
Translates to: RPRWSRDALRWH*GHVMELEDEDS
Trigger: GCTGTCCTCGTCTTCGAGCTCCATCACGTGCCCGCAGTGCCACCGCAGCGCATCCCTGGACCACCGCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 72 bp GCAGTAGAGGACGTCGCACTGCTCGCAGAGCGTGGCTaGTGGCTCTGGCGGGGTGCGGTCGCACAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: AVEDVALLAERG*WLWRGAVAQLA
Trigger: TGCCAGCTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGTGCGACGTCCTCTACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp GGCTTTCTCCCTGCGGCCGGGATTGACCCGCTTCCCTaGTTCCCAGCTGCTGCTCCTGCGGCGCCTCTGACC +
Preference number: 6 (lower is better)
Translates to: GFLPAAGIDPLP*FPAAAPAAPLT
Trigger: GGTCAGAGGCGCCGCAGGAGCAGCAGCTGGGAACCAGGGAAGCGGGTCAATCCCGGCCGCAGGGAGAAAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS TCA 72 bp GCCCCGGCCCAACTCCTTATCGGGGTGATAGCGAGGTaGGACAGGCAGGTGCGAAGGCCGCTCAGCCGTGGG +
Preference number: 6 (lower is better)
Translates to: APAQLLIGVIAR*DRQVRRPLSRG
Trigger: CCCACGGCTGAGCGGCCTTCGCACCTGCCTGTCTCACCTCGCTATCACCCCGATAAGGAGTTGGGCCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS TCA 72 bp GGTCCAGGGATGCGCTGCGGTGGCACTGCGGGCACGTaGTGGAGCTCGAAGACGAGGACAGCGAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: GPGMRCGGTAGT*WSSKTRTARSR
Trigger: CCTGCTCCTCGCTGTCCTCGTCTTCGAGCTCCATCACGTGCCCGCAGTGCCACCGCAGCGCATCCCTGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp GTAGAGGACGTCGCACTGCTCGCAGAGCGTGGCTGCTaGCTCTGGCGGGGTGCGGTCGCACAGCTGGCAGAT +
Preference number: 6 (lower is better)
Translates to: VEDVALLAERGC*LWRGAVAQLAD
Trigger: ATCTGCCAGCTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGTGCGACGTCCTCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp CAGAGCAGTAGAGGACGTCGCACTGCTCGCAGAGCGTaGCTGCTGGCTCTGGCGGGGTGCGGTCGCACAGCT +
Preference number: 6 (lower is better)
Translates to: QSSRGRRTARRA*LLALAGCGRTA
Trigger: AGCTGTGCGACCGCACCCCGCCAGAGCCAGCAGCCACGCTCTGCGAGCAGTGCGACGTCCTCTACTGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CAA 72 bp GCCCAGGCCTTGTCATCCTTGCCCAGCATCATGTCCTaGACCACGCTGGCCCTGGCCACCCCGAAGGCGGGG +
Preference number: 6 (lower is better)
Translates to: AQALSSLPSIMS*TTLALATPKAG
Trigger: CCCCGCCTTCGGGGTGGCCAGGGCCAGCGTGGTCAAGGACATGATGCTGGGCAAGGATGACAAGGCCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 72 bp GCTTCAACCTGCGGCCAGATTCCGGAGCCGGTCGGCTaGCCTCGCGGTGGCCTGCGAGGAGCTTTAGGTGAT +
Preference number: 6 (lower is better)
Translates to: ASTCGQIPEPVG*PRGGLRGALGD
Trigger: ATCACCTAAAGCTCCTCGCAGGCCACCGCGAGGGCAGCCGACCGGCTCCGGAATCTGGCCGCAGGTTGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 72 bp TTGAGGCTGAGGGCTGGCATGAAGACCCCGTCCACGTaGCTGAAGGCTGTGGGGCCCTGCTGCTGCCCGTTG +
Preference number: 6 (lower is better)
Translates to: LRLRAGMKTPST*LKAVGPCCCPL
Trigger: CAACGGGCAGCAGCAGGGCCCCACAGCCTTCAGCCACGTGGACGGGGTCTTCATGCCAGCCCTCAGCCTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp GGCGCCCAGGCGATGCTTGGCGAAGGGTCCCCGGGATaGATGGCACTTGAGCTGGCAGGCAGAGCAGTAGAG +
Preference number: 6 (lower is better)
Translates to: GAQAMLGEGSPG*MALELAGRAVE
Trigger: CTCTACTGCTCTGCCTGCCAGCTCAAGTGCCATCCATCCCGGGGACCCTTCGCCAAGCATCGCCTGGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449018.7
CDS CAA 90 bp ACATACATGGCCCAGGCCTTGTCATCCTTGCCCAGCATCATGTCCTaGACCACGCTGGCCCTGGCCACCCCGAAGGCGGGGTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: TYMAQALSSLPSIMS*TTLALATPKAGSGW
Trigger: CCACCCAGACCCCGCCTTCGGGGTGGCCAGGGCCAGCGTGGTCAAGGACATGATGCTGGGCAAGGATGACAAGGCCTGGGCCATGTATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS TCA 72 bp CAGGCACAGTGCCGAGCTGGAGCGGGGCTAATTGCCTaGCAGCTTTGGCCGCCCCAGGTTAGTCGGCACTTC +
Preference number: 6 (lower is better)
Translates to: QAQCRAGAGLIA*QLWPPQVSRHF
Trigger: GAAGTGCCGACTAACCTGGGGCGGCCAAAGCTGTCAGGCAATTAGCCCCGCTCCAGCTCGGCACTGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS GCA 72 bp TATTCAGGTCCAGCAGCACGCCCACGGTGGCCCCCTTaGACACGCCACCTTCCGTCCTGTTGGTGTGGGAGT +
Preference number: 6 (lower is better)
Translates to: YSGPAARPRWPP*TRHLPSCWCGS
Trigger: ACTCCCACACCAACAGGACGGAAGGTGGCGTGTGCAAGGGGGCCACCGTGGGCGTGCTGCTGGACCTGAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp CTGCACCAGGCGATGCTTGGCGAAGGGTCCCCGGGATaGATGGCACTTGAGCTGGCAGGCAGAGCAGTAGAG +
Preference number: 6 (lower is better)
Translates to: LHQAMLGEGSPG*MALELAGRAVE
Trigger: CTCTACTGCTCTGCCTGCCAGCTCAAGTGCCATCCATCCCGGGGACCCTTCGCCAAGCATCGCCTGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS CCA 72 bp GAGTGTGCTTATTCAGGTCCAGCAGCACGCCCACGGTaGCCCCCTTGCACACGCCACCTTCCGTCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: ECAYSGPAARPR*PPCTRHLPSCW
Trigger: CCAACAGGACGGAAGGTGGCGTGTGCAAGGGGGCCACCGTGGGCGTGCTGCTGGACCTGAATAAGCACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CAA 72 bp TTATTCAGGTCCAGCAGCACGCCCACGGTGGCCCCCTaGCACACGCCACCTTCCGTCCTGTTGGTGTGGGAG +
Preference number: 6 (lower is better)
Translates to: LFRSSSTPTVAP*HTPPSVLLVWE
Trigger: CTCCCACACCAACAGGACGGAAGGTGGCGTGTGCAAGGGGGCCACCGTGGGCGTGCTGCTGGACCTGAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CAA 90 bp GGGCTGTGGGTGAAGGGTGGCATCCTCCAGGCCAGCGTGACGCTGTaGTTACGGGTGCAGCATTTCTCCAGCTGCAGTAGGGGGACGGGT +
Preference number: 6 (lower is better)
Translates to: GLWVKGGILQASVTL*LRVQHFSSCSRGTG
Trigger: ACCCGTCCCCCTACTGCAGCTGGAGAAATGCTGCACCCGTAACAACAGCGTCACGCTGGCCTGGAGGATGCCACCCTTCACCCACAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp ACATGCTGTAGTTCTCCATTTCATGCTCGGGACACGTaGGGAACTTGCGGGCCGTGCTGCCCCCAGTCGCCC +
Preference number: 6 (lower is better)
Translates to: TCCSSPFHARDT*GTCGPCCPQSP
Trigger: GGGCGACTGGGGGCAGCACGGCCCGCAAGTTCCCCACGTGTCCCGAGCATGAAATGGAGAACTACAGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp AGGCCTGAGATAGTTGTGCCTTGTGCTGCTTCCACATaGCCCCCAGCGGCTTCACCTCGTGCTTGGCGTGCC +
Preference number: 6 (lower is better)
Translates to: RPEIVVPCAAST*PPAASPRAWRA
Trigger: GGCACGCCAAGCACGAGGTGAAGCCGCTGGGGGCCATGTGGAAGCAGCACAAGGCACAACTATCTCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CCA 72 bp CCTGTGAATGTCACTGTCACAGGCACAGTGCCGAGCTaGAGCGGGGCTAATTGCCTGACAGCTTTGGCCGCC +
Preference number: 6 (lower is better)
Translates to: PVNVTVTGTVPS*SGANCLTALAA
Trigger: GGCGGCCAAAGCTGTCAGGCAATTAGCCCCGCTCCAGCTCGGCACTGTGCCTGTGACAGTGACATTCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000444294.7
CDS TCA 72 bp ACTTTCGGCTCCAGGGCGCCTTTGACCCACTGCTCCTaGGACACCTGGACGCGCTTGATCAGAGCATCTGAG +
Preference number: 6 (lower is better)
Translates to: TFGSRAPLTHCS*DTWTRLIRASE
Trigger: CTCAGATGCTCTGATCAAGCGCGTCCAGGTGTCTCAGGAGCAGTGGGTCAAAGGCGCCCTGGAGCCGAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CAA 72 bp GTGAAGGGTGGCATCCTCCAGGCCAGCGTGACGCTGTaGTTACGGGTGCAGCATTTCTCCAGCTGCAGTAGG +
Preference number: 6 (lower is better)
Translates to: VKGGILQASVTL*LRVQHFSSCSR
Trigger: CCTACTGCAGCTGGAGAAATGCTGCACCCGTAACAACAGCGTCACGCTGGCCTGGAGGATGCCACCCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS CAA 72 bp ACGTGGCTGAAGGCTGTGGGGCCCTGCTGCTGCCCGTaGATGAAGAAGGTGAGAGTGTGCTTATTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: TWLKAVGPCCCP*MKKVRVCLFRS
Trigger: GGACCTGAATAAGCACACTCTCACCTTCTTCATCAACGGGCAGCAGCAGGGCCCCACAGCCTTCAGCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS GCA 72 bp GTGACGCTGTTGTTACGGGTGCAGCATTTCTCCAGCTaGAGTAGGGGGACGGGTGGCACCCTACATTTCATC +
Preference number: 6 (lower is better)
Translates to: VTLLLRVQHFSS*SRGTGGTLHFI
Trigger: GATGAAATGTAGGGTGCCACCCGTCCCCCTACTGCAGCTGGAGAAATGCTGCACCCGTAACAACAGCGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366653.6
ENST00000449018.7
CDS GCA 72 bp GATAACACACCGGGGTTCGACAGCTCACGCAGTACATaGTGTAGTTCTCCATTTCATGCTCGGGACACGTGG +
Preference number: 6 (lower is better)
Translates to: DNTPGFDSSRST*CSSPFHARDTW
Trigger: CCACGTGTCCCGAGCATGAAATGGAGAACTACAGCATGTACTGCGTGAGCTGTCGAACCCCGGTGTGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS TCA 72 bp GTCCGGTGGACTGACGCAGCTTCAATGTGCAGTGATTaGTCTGGTCCCAAACCATCTTCAACTTGTGTTCCC +
Preference number: 6 (lower is better)
Translates to: VRWTDAASMCSD*SGPKPSSTCVP
Trigger: GGGAACACAAGTTGAAGATGGTTTGGGACCAGATCAATCACTGCACATTGAAGCTGCGTCAGTCCACCGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7
CDS TCA 72 bp GCTTCCTTTGCCTTATCTGAAACTCCATTTAAGGCCTaGGATAGTTGTGCCTTGTGCTGCTTCCACATGGCC +
Preference number: 6 (lower is better)
Translates to: ASFALSETPFKA*DSCALCCFHMA
Trigger: GGCCATGTGGAAGCAGCACAAGGCACAACTATCTCAGGCCTTAAATGGAGTTTCAGATAAGGCAAAGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366653.6
ENST00000444294.7
ENST00000449018.7