RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM66 (Homo sapiens)

Ensembl gene IDs: ENSG00000166436

Ensembl transcript IDs: ENST00000299550.10, ENST00000402157.6, ENST00000402157.7, ENST00000481014.6, ENST00000525788.1, ENST00000529057.1, ENST00000529211.1, ENST00000530502.1, ENST00000531498.5, ENST00000644261.1, ENST00000646038.1, ENST00000646038.2

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGGTGGGAAAGGCCCTGATATAAGGAGTCATGCTGACTCCAGCTaGGCCCCAGCAAGGGAGCAGCCACCGCGCTCCCTAGTCTCCCTC +
Preference number: 1 (lower is better)
Translates to: TGGKGPDIRSHADSS*APAREQPPRSLVSL
Trigger: GAGGGAGACTAGGGAGCGCGGTGGCTGCTCCCTTGCTGGGGCTCAGCTGGAGTCAGCATGACTCCTTATATCAGGGCCTTTCCCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 90 bp GGTAGCCTGACCTCCAGTATCCTCACAAACACCCTGCGAGGGCCATaGAGATGCATTCAGGATGCAGCCTCGAGCTCCTGTTCCCATGGC +
Preference number: 1 (lower is better)
Translates to: GSLTSSILTNTLRGP*RCIQDAASSSCSHG
Trigger: GCCATGGGAACAGGAGCTCGAGGCTGCATCCTGAATGCATCTGCATGGCCCTCGCAGGGTGTTTGTGAGGATACTGGAGGTCAGGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 90 bp CTGACCTCCAGTATCCTCACAAACACCCTGCGAGGGCCATGCAGATaGATTCAGGATGCAGCCTCGAGCTCCTGTTCCCATGGCTTCCAG +
Preference number: 1 (lower is better)
Translates to: LTSSILTNTLRGPCR*IQDAASSSCSHGFQ
Trigger: CTGGAAGCCATGGGAACAGGAGCTCGAGGCTGCATCCTGAATGCATCTGCATGGCCCTCGCAGGGTGTTTGTGAGGATACTGGAGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 90 bp CTAGTCTCCCTCCATCCGAATGTTATCAGCAGCAGGCACCCACCCTaGCAGGTTCTCCTCCTGGTTAGCAGCACTGACATGCACGGAAAC +
Preference number: 1 (lower is better)
Translates to: LVSLHPNVISSRHPP*QVLLLVSSTDMHGN
Trigger: GTTTCCGTGCATGTCAGTGCTGCTAACCAGGAGGAGAACCTGGCAGGGTGGGTGCCTGCTGCTGATAACATTCGGATGGAGGGAGACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 90 bp CATGGCAGGTGCCTCTATCCAGACAGGACAAGCAAAGGCAAACAGTaGCAGTCTTTGGCTGTGCTGGGCCAGGGATCACAGTCCTGCCAT +
Preference number: 1 (lower is better)
Translates to: HGRCLYPDRTSKGKQ*QSLAVLGQGSQSCH
Trigger: ATGGCAGGACTGTGATCCCTGGCCCAGCACAGCCAAAGACTGTCACTGTTTGCCTTTGCTTGTCCTGTCTGGATAGAGGCACCTGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp GAGGCCCAGAGGAGTGAGCTGGTTGTGGGTTACTCTCTCCACCCATaGAACTCTGGACCTGAAGCAGACAGCAGCTGTCTCACAGTATTC +
Preference number: 1 (lower is better)
Translates to: EAQRSELVVGYSLHP*NSGPEADSSCLTVF
Trigger: GAATACTGTGAGACAGCTGCTGTCTGCTTCAGGTCCAGAGTTCCATGGGTGGAGAGAGTAACCCACAACCAGCTCACTCCTCTGGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp TGGCCCAGCAAGCTGATCCGTGAGCCCAGGAGGCCACACCCAAGCTaGGAGCCTCACTCATATAAGGAAAGCCAAGCTTTTAACAGGTAT +
Preference number: 1 (lower is better)
Translates to: WPSKLIREPRRPHPS*EPHSYKESQAFNRY
Trigger: ATACCTGTTAAAAGCTTGGCTTTCCTTATATGAGTGAGGCTCCCAGCTTGGGTGTGGCCTCCTGGGCTCACGGATCAGCTTGCTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp CCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACAACTaGAGCAAGCAGGTGGTGGTGATCAGCACAGGTGGGAAAGGCCCT +
Preference number: 1 (lower is better)
Translates to: PPRKQPIAASNSRNN*SKQVVVISTGGKGP
Trigger: AGGGCCTTTCCCACCTGTGCTGATCACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp TACCATCCACACTCTGAAGAGGATAAGCTGCAAGATGGGGAGGAATaGTCGACAGTATGGGACAACAGCTGCCAGAGTGCCCAGTCTCCT +
Preference number: 1 (lower is better)
Translates to: YHPHSEEDKLQDGEE*STVWDNSCQSAQSP
Trigger: AGGAGACTGGGCACTCTGGCAGCTGTTGTCCCATACTGTCGACCATTCCTCCCCATCTTGCAGCTTATCCTCTTCAGAGTGTGGATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp CAGACAGGACAAGCAAAGGCAAACAGTGACAGTCTTTGGCTGTGCTaGGCCAGGGATCACAGTCCTGCCATATGTCTAAACCTCTCTCCC +
Preference number: 1 (lower is better)
Translates to: QTGQAKANSDSLWLC*ARDHSPAICLNLSP
Trigger: GGGAGAGAGGTTTAGACATATGGCAGGACTGTGATCCCTGGCCCAGCACAGCCAAAGACTGTCACTGTTTGCCTTTGCTTGTCCTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp GCCTCTATCCAGACAGGACAAGCAAAGGCAAACAGTGACAGTCTTTaGCTGTGCTGGGCCAGGGATCACAGTCCTGCCATATGTCTAAAC +
Preference number: 1 (lower is better)
Translates to: ASIQTGQAKANSDSL*LCWARDHSPAICLN
Trigger: GTTTAGACATATGGCAGGACTGTGATCCCTGGCCCAGCACAGCCAAAGACTGTCACTGTTTGCCTTTGCTTGTCCTGTCTGGATAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp AGAACTAGAATCTTTAAGCAGGAGGAGAGGCCCAGAGGAGTGAGCTaGTTGTGGGTTACTCTCTCCACCCATGGAACTCTGGACCTGAAG +
Preference number: 1 (lower is better)
Translates to: RTRIFKQEERPRGVS*LWVTLSTHGTLDLK
Trigger: CTTCAGGTCCAGAGTTCCATGGGTGGAGAGAGTAACCCACAACCAGCTCACTCCTCTGGGCCTCTCCTCCTGCTTAAAGATTCTAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp CCCAAACTAGAAAACGGGATCACGGAAGCCCATCTGCTTAGAACGTaGCATGTGCTGCTGAAAGAATGGCAAGCCAAGGGGCATGGTTTG +
Preference number: 1 (lower is better)
Translates to: PKLENGITEAHLLRT*HVLLKEWQAKGHGL
Trigger: CAAACCATGCCCCTTGGCTTGCCATTCTTTCAGCAGCACATGCCACGTTCTAAGCAGATGGGCTTCCGTGATCCCGTTTTCTAGTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 90 bp ACGGGATCACGGAAGCCCATCTGCTTAGAACGTGGCATGTGCTGCTaGAAGAATGGCAAGCCAAGGGGCATGGTTTGCTTTAAAGTGAAG +
Preference number: 1 (lower is better)
Translates to: TGSRKPICLERGMCC*KNGKPRGMVCFKVK
Trigger: CTTCACTTTAAAGCAAACCATGCCCCTTGGCTTGCCATTCTTTCAGCAGCACATGCCACGTTCTAAGCAGATGGGCTTCCGTGATCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 90 bp AGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAGACAGCTaGGCACTGAAAGGTATTCATTCTATTTGGCAACTGGGCAGTCAC +
Preference number: 1 (lower is better)
Translates to: RVGGWCEMLRRGQDS*ALKGIHSIWQLGSH
Trigger: GTGACTGCCCAGTTGCCAAATAGAATGAATACCTTTCAGTGCTCAGCTGTCTTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 90 bp ATCCAGACAGGACAAGCAAAGGCAAACAGTGACAGTCTTTGGCTGTaGTGGGCCAGGGATCACAGTCCTGCCATATGTCTAAACCTCTCT +
Preference number: 1 (lower is better)
Translates to: IQTGQAKANSDSLWL*WARDHSPAICLNLS
Trigger: AGAGAGGTTTAGACATATGGCAGGACTGTGATCCCTGGCCCAGCACAGCCAAAGACTGTCACTGTTTGCCTTTGCTTGTCCTGTCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 90 bp TCAACACTGAGAGCTCAACTGAGGCTGCCAACTGTGAATCTGTCATaGATAGCAGCCCAGGAGGTGGAAGCAGCAAATATGATGATGCCG +
Preference number: 1 (lower is better)
Translates to: STLRAQLRLPTVNLS*IAAQEVEAANMMMP
Trigger: CGGCATCATCATATTTGCTGCTTCCACCTCCTGGGCTGCTATGCATGACAGATTCACAGTTGGCAGCCTCAGTTGAGCTCTCAGTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 90 bp AGGAGCAAAGGCTCAATTCTGGCGTTCAGAAAGGAAGACTATAAGTaGCTCCATGGAGTGAGAGAGGGAGCAGAACAGAGCCCAGGAACA +
Preference number: 1 (lower is better)
Translates to: RSKGSILAFRKEDYK*LHGVREGAEQSPGT
Trigger: TGTTCCTGGGCTCTGTTCTGCTCCCTCTCTCACTCCATGGAGTCACTTATAGTCTTCCTTTCTGAACGCCAGAATTGAGCCTTTGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 90 bp GTTCAACAAGACTCATCTACCATCCACACTCTGAAGAGGATAAGCTaGAAGATGGGGAGGAATGGTCGACAGTATGGGACAACAGCTGCC +
Preference number: 1 (lower is better)
Translates to: VQQDSSTIHTLKRIS*KMGRNGRQYGTTAA
Trigger: GGCAGCTGTTGTCCCATACTGTCGACCATTCCTCCCCATCTTGCAGCTTATCCTCTTCAGAGTGTGGATGGTAGATGAGTCTTGTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 90 bp AGCTGTCTCACAGTATTCACAAGCAGAACTCACGATCCATACCTCTaGATGAGGATGATGAAGGGTATGGCCACTGACAAGCACCAACAG +
Preference number: 1 (lower is better)
Translates to: SCLTVFTSRTHDPYL*MRMMKGMATDKHQQ
Trigger: CTGTTGGTGCTTGTCAGTGGCCATACCCTTCATCATCCTCATTCAGAGGTATGGATCGTGAGTTCTGCTTGTGAATACTGTGAGACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 90 bp CAAAGTTCACAGGATGGTGGGAATGTGGGCTGCACAAAGGAAAGATaGCCTAGAGCAGGAATTAGTGACATGAGAACAGAGGGTACTTTG +
Preference number: 1 (lower is better)
Translates to: QSSQDGGNVGCTKER*PRAGISDMRTEGTL
Trigger: CAAAGTACCCTCTGTTCTCATGTCACTAATTCCTGCTCTAGGTCATCTTTCCTTTGTGCAGCCCACATTCCCACCATCCTGTGAACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 90 bp CTTTCTAGTATATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTaGCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTGAT +
Preference number: 1 (lower is better)
Translates to: LSSIYLLTSKKATNS*LQLQKQLEQAGGGD
Trigger: ATCACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATATACTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 90 bp AAAACAAATACCCTGAAAACCGTTAGAACCCAAATAGGCACAAATTaGGACCTATGGCCTCTAGAAGCCTCCACTAGTCTGCACATGGCA +
Preference number: 1 (lower is better)
Translates to: KTNTLKTVRTQIGTN*DLWPLEASTSLHMA
Trigger: TGCCATGTGCAGACTAGTGGAGGCTTCTAGAGGCCATAGGTCTCAATTTGTGCCTATTTGGGTTCTAACGGTTTTCAGGGTATTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 90 bp TTTAACAGGTATTTCTGCTTTAAATTTGTGGTCTCCAATTGCTCCTaGGGAAGGATCAGGTCTGAGCCTGTCACAACACTCACCAGTTGC +
Preference number: 1 (lower is better)
Translates to: FNRYFCFKFVVSNCS*GRIRSEPVTTLTSC
Trigger: GCAACTGGTGAGTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAAATTTAAAGCAGAAATACCTGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 90 bp GAAAGTCATGTGAGTCTCAAAGGGCAGAAGCCTAAGTCCAAAGATTaGCGGACTAGTAAAGCATTCAAGACTCAGTTACCCCAAACTAGA +
Preference number: 1 (lower is better)
Translates to: ESHVSLKGQKPKSKD*RTSKAFKTQLPQTR
Trigger: TCTAGTTTGGGGTAACTGAGTCTTGAATGCTTTACTAGTCCGGCAATCTTTGGACTTAGGCTTCTGCCCTTTGAGACTCACATGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp AGAAAGTTCAGGATGCTGACAAAAACATCAGTGTGTGATAGGCTCTaGGTTCATGCTGGGGAGAGGAAGAAGTCCAGGAGAAAGTTAAAA +
Preference number: 1 (lower is better)
Translates to: RKFRMLTKTSVCDRL*VHAGERKKSRRKLK
Trigger: TTTTAACTTTCTCCTGGACTTCTTCCTCTCCCCAGCATGAACCCAGAGCCTATCACACACTGATGTTTTTGTCAGCATCCTGAACTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp AAAAATTCACCAAGGAAAGTAGGTTTTCCCGAGCCTAACCAGGTGTaGTCTTGTCAAGTGGAGCCTATACATCTGATTACTCTGGTAATA +
Preference number: 1 (lower is better)
Translates to: KNSPRKVGFPEPNQV*SCQVEPIHLITLVI
Trigger: TATTACCAGAGTAATCAGATGTATAGGCTCCACTTGACAAGACCACACCTGGTTAGGCTCGGGAAAACCTACTTTCCTTGGTGAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 90 bp TGTATCCAAGGTTACACAGCTCATAATGGAAAGAGCCAAAAATTTTaGTGTTCAGACTCTCAAATCAGATATCTTTCTAGTATATACCTC +
Preference number: 1 (lower is better)
Translates to: CIQGYTAHNGKSQKF*CSDSQIRYLSSIYL
Trigger: GAGGTATATACTAGAAAGATATCTGATTTGAGAGTCTGAACACCAAAATTTTTGGCTCTTTCCATTATGAGCTGTGTAACCTTGGATACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCCAGCAAGCTGATCCGTaGGCCCAGGAGGCCACACCC +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPAQQADP*AQEATP
Trigger: GGGTGTGGCCTCCTGGGCTCACGGATCAGCTTGCTG...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAGCCAGAGTCCGCTGGTaGGGGATGGCAGGGACTGCC +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQARVRW*GMAGTA
Trigger: GGCAGTCCCTGCCATCCCCCACCAGCGGACTCTGGC...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATTCTGGCCCAGCAAGCTaGTCCGTGAGCCCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYSGPAS*SVSPGG
Trigger: GCCTCCTGGGCTCACGGATCAGCTTGCTGGGCCAGA...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCGGAAGGACTCACAGATaGTGTCCTCCCAGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPAGRTHR*CPPSRS
Trigger: GCTCCTGCTGGGAGGACAGCATCTGTGAGTCCTTCC...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTGGAGCCAGAGTCCGCTaGTGGGGGATGGCAGGGACT +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGGARVR*WGMAGT
Trigger: AGTCCCTGCCATCCCCCACCAGCGGACTCTGGCTCC...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTGGTGCAGGATCATGGTaGGGAGCTGCCCACCAGCCT +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGGAGSW*GAAHQP
Trigger: AGGCTGGTGGGCAGCTCCTCACCATGATCCTGCACC...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTCATGCTGACTCCAGCTaGGCCCCAGCAAGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGHADSS*APAREQ
Trigger: CTGCTCCCTTGCTGGGGCTCAGCTGGAGTCAGCATG...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCGGGAGCCTCTCAGCATaGAGGCTCTCTACGATGAGA +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPAGSLSA*RLSTMR
Trigger: TCTCATCGTAGAGAGCCTGCATGCTGAGAGGCTCCC...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCCTCAGTCCTGGCCACTaGCATGTCAGGTTCATAGCT +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPALSPGH*HVRFIA
Trigger: AGCTATGAACCTGACATGTCAGTGGCCAGGACTGAG...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCAGGCCACACCCAAGCTaGGAGCCTCACTCATATAAG +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPARPHPS*EPHSYK
Trigger: CTTATATGAGTGAGGCTCCCAGCTTGGGTGTGGCCT...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTAGAGGCCCAGAGGAGTaGGCTGGTTGTGGGTTACTC +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGRGPEE*AGCGLL
Trigger: GAGTAACCCACAACCAGCTCACTCCTCTGGGCCTCT...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAAAGCCCAGGAAGGGGTaGTCCAGAAGGAGCAAAGGC +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQKPRKG*SRRSKG
Trigger: GCCTTTGCTCCTTCTGGATCACCCCTTCCTGGGCTT...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCTTGCCCAGGCTGGAATaGAATGGCATGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPALPRLE*NGMISA
Trigger: AGCTGAGATCATGCCATTGCATTCCAGCCTGGGCAA...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CCTGAAATTAGCCATGCAATGACAGGACCAGGGAGAGCTGTCTCAGTCCTGGCCAGTCTTTGGCTGTGCTaGGCCAGGGATCACAGTCCT +
Preference number: 2 (lower is better)
Translates to: PEISHAMTGPGRAVSVLASLWLC*ARDHSP
Trigger: AGGACTGTGATCCCTGGCCCAGCACAGCCAAAGACT...GGCCAGGACTGAGACAGCTCTCCCTGGTCCTGTCATTGCATGGCTAATTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAAGGGAGTGGGAGCAGTaGAGTAAGCGAGGGAGCAGT +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQREWEQ*SKRGSS
Trigger: ACTGCTCCCTCGCTTACTCCACTGCTCCCACTCCCT...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAAGTGGAGACAGAGGCTaGAGACTCCAGGGAGTGGGA +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQSGDRG*RLQGVG
Trigger: TCCCACTCCCTGGAGTCTCCAGCCTCTGTCTCCACT...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp CCTGAAATTAGCCATGCAATGACAGGACCAGGGAGAGCTGTCTCAGTCCTGGCCATGGAACTCTGGACCTaGAGCAGACAGCAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: PEISHAMTGPGRAVSVLAMELWT*SRQQLS
Trigger: AGACAGCTGCTGTCTGCTTCAGGTCCAGAGTTCCAT...GGCCAGGACTGAGACAGCTCTCCCTGGTCCTGTCATTGCATGGCTAATTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAGCAGGCTCTCTACGATaGGAAGGGAGCATGTGTCTC +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQAGSLR*EGSMCL
Trigger: GAGACACATGCTCCCTTCTCATCGTAGAGAGCCTGC...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTTATAAGGAGTCATGCTaGCTCCAGCTGAGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGYKESC*LQLSPS
Trigger: GCTGGGGCTCAGCTGGAGTCAGCATGACTCCTTATA...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp CCTGAAATTAGCCATGCAATGACAGGACCAGGGAGAGCTGTCTCAGTCCTGGCCCAGATGCATTCAGGATaGAGCCTCGAGCTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: PEISHAMTGPGRAVSVLAQMHSG*SLELLF
Trigger: GAACAGGAGCTCGAGGCTGCATCCTGAATGCATCTG...GGCCAGGACTGAGACAGCTCTCCCTGGTCCTGTCATTGCATGGCTAATTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATTCCTCACAAACACCCTaGGAGGGCCATGCAGATGCA +
Preference number: 2 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYSSQTP*EGHADA
Trigger: TGCATCTGCATGGCCCTCGCAGGGTGTTTGTGAGGA...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAATCCTCACAAACACCCTaGGAGGGCCATGCAGATGCA +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQSSQTP*EGHADA
Trigger: TGCATCTGCATGGCCCTCGCAGGGTGTTTGTGAGGA...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTTCCTCACAAACACCCTaGGAGGGCCATGCAGATGCA +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGSSQTP*EGHADA
Trigger: TGCATCTGCATGGCCCTCGCAGGGTGTTTGTGAGGA...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATTCTCAACCAAGCCCTTaGTTGGGAGGTAGCCTGACC +
Preference number: 2 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYSQPSP*LGGSLT
Trigger: GGTCAGGCTACCTCCCAAGCAAGGGCTTGGTTGAGA...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CCTGAAATTAGCCATGCAATGACAGGACCAGGGAGAGCTGTCTCAGTCCTGGCCAACAGTGACAGTCTTTaGCTGTGCTGGGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: PEISHAMTGPGRAVSVLANSDSL*LCWARD
Trigger: ATCCCTGGCCCAGCACAGCCAAAGACTGTCACTGTT...GGCCAGGACTGAGACAGCTCTCCCTGGTCCTGTCATTGCATGGCTAATTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CCTGAAATTAGCCATGCAATGACAGGACCAGGGAGAGCTGTCTCAGTCCTGGCCGGAGTGAGCTGGTTGTaGGTTACTCTCTCCACCCAT +
Preference number: 2 (lower is better)
Translates to: PEISHAMTGPGRAVSVLAGVSWL*VTLSTH
Trigger: ATGGGTGGAGAGAGTAACCCACAACCAGCTCACTCC...GGCCAGGACTGAGACAGCTCTCCCTGGTCCTGTCATTGCATGGCTAATTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATCCCAGAGGAGTGAGCTaGTTGTGGGTTACTCTCTCC +
Preference number: 2 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYPRGVS*LWVTLS
Trigger: GGAGAGAGTAACCCACAACCAGCTCACTCCTCTGGG...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACAGCCTGGAGGCGGGCTaGTCAGAAGACTCACTTCTG +
Preference number: 2 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHSLEAG*SEDSLL
Trigger: CAGAAGTGAGTCTTCTGACCAGCCCGCCTCCAGGCT...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCAGGATGGTGGGAATGTaGGCTGCACAAAGGAAAGAT +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPARMVGM*AAQRKD
Trigger: ATCTTTCCTTTGTGCAGCCCACATTCCCACCATCCT...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCCTGAGGTCATGGAAATaGACTAAAGGAGCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPALRSWK*TKGAGQ
Trigger: TTGCCCTGCTCCTTTAGTCCATTTCCATGACCTCAG...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp CCTGAAATTAGCCATGCAATGACAGGACCAGGGAGAGCTGTCTCAGTCCTGGCCTGTATACATGGCTCCTaGGCCCTGGACACTAAAAGG +
Preference number: 2 (lower is better)
Translates to: PEISHAMTGPGRAVSVLACIHGS*ALDTKR
Trigger: CCTTTTAGTGTCCAGGGCTCAGGAGCCATGTATACA...GGCCAGGACTGAGACAGCTCTCCCTGGTCCTGTCATTGCATGGCTAATTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTATGGAACTCTGGACCTaGAGCAGACAGCAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGMELWT*SRQQLS
Trigger: AGACAGCTGCTGTCTGCTTCAGGTCCAGAGTTCCAT...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp CCTGAAATTAGCCATGCAATGACAGGACCAGGGAGAGCTGTCTCAGTCCTGGCCGCTCCCCCAACAATATaGGCAATGGGTTCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: PEISHAMTGPGRAVSVLAAPPTI*AMGSFS
Trigger: TGAGAAGGAACCCATTGCTCATATTGTTGGGGGAGC...GGCCAGGACTGAGACAGCTCTCCCTGGTCCTGTCATTGCATGGCTAATTTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAAGGAAGGATCAGGTCTaGGCCTGTCACAACACTCAC +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQRKDQV*ACHNTH
Trigger: GTGAGTGTTGTGACAGGCTCAGACCTGATCCTTCCT...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTAGGAAGGATCAGGTCTaGGCCTGTCACAACACTCAC +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGRKDQV*ACHNTH
Trigger: GTGAGTGTTGTGACAGGCTCAGACCTGATCCTTCCT...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTAAGCAGGAGCAGCTGTaGTTCTTCCTCCCTACCCAA +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGKQEQL*FFLPTQ
Trigger: TTGGGTAGGGAGGAAGAATCACAGCTGCTCCTGCTT...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAATCTGCACATGGCAGGTaGCTCTATCCAGACAGGACA +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQSAHGR*LYPDRT
Trigger: TGTCCTGTCTGGATAGAGGCACCTGCCATGTGCAGA...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAAAGCCTCCACTAGTCTaGACATGGCAGGTGCCTCTA +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQKPPLV*TWQVPL
Trigger: TAGAGGCACCTGCCATGTGCAGACTAGTGGAGGCTT...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAATCACGGAAGCCCATCTaGTTAGAACGTGGCATGTGC +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQSRKPI*LERGMC
Trigger: GCACATGCCACGTTCTAAGCAGATGGGCTTCCGTGA...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATTCACGGAAGCCCATCTaGTTAGAACGTGGCATGTGC +
Preference number: 2 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYSRKPI*LERGMC
Trigger: GCACATGCCACGTTCTAAGCAGATGGGCTTCCGTGA...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCACAACACTCACCAGTTaGCCAACACCAAGTACAACA +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPATTLTS*PTPSTT
Trigger: TGTTGTACTTGGTGTTGGGCAACTGGTGAGTGTTGT...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTGAGCCTAACCAGGTGTaGTCTTGTCAAGTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGEPNQV*SCQVEP
Trigger: AGGCTCCACTTGACAAGACCACACCTGGTTAGGCTC...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCAAGGACAAAAGGACTTaGCTGACTTCAAAACTGGGC +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPAKDKRT*LTSKLG
Trigger: GCCCAGTTTTGAAGTCAGCCAAGTCCTTTTGTCCTT...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCGGTATTCATTCTATTTaGCAACTGGGCAGTCACTGG +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPAGIHSI*QLGSHW
Trigger: CCAGTGACTGCCCAGTTGCCAAATAGAATGAATACC...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTACAGCAGGCTCTAACTaGTGCAGGATCATGGTGAGG +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGTAGSN*CRIMVR
Trigger: CCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGT...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATAGCAAAGGCAAACAGTaGCAGTCTTTGGCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYSKGKQ*QSLAVL
Trigger: CAGCACAGCCAAAGACTGTCACTGTTTGCCTTTGCT...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCGAAAGTTCAGGATGCTaGCAAAAACATCAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPAESSGC*QKHQCV
Trigger: CACACACTGATGTTTTTGTCAGCATCCTGAACTTTC...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTGTGTTGATACCAGCTTaGGCAACATGGCGAAACTCC +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGVLIPA*ATWRNS
Trigger: GGAGTTTCGCCATGTTGCTCAAGCTGGTATCAACAC...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCTTTTTCTGGATTCTCTaGGAATCCAGAGACTTGTGG +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPAFFWIL*ESRDLW
Trigger: CCACAAGTCTCTGGATTCTCAGAGAATCCAGAAAAA...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp CTCCACAGCCACCCAGCTCAGTCAAGAATGTCACACCATCCACAGCATTTTCACTCTGCACATGGCAGGTaGCTCTATCCAGACAGGACA +
Preference number: 2 (lower is better)
Translates to: LHSHPAQSRMSHHPQHFHSAHGR*LYPDRT
Trigger: TGTCCTGTCTGGATAGAGGCACCTGCCATGTGCAGA...GTGAAAATGCTGTGGATGGTGTGACATTCTTGACTGAGCTGGGTGGCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp CTCCACAGCCACCCAGCTCAGTCAAGAATGTCACACCATCCACAGCATTTTCACAAGCCTCCACTAGTCTaGACATGGCAGGTGCCTCTA +
Preference number: 2 (lower is better)
Translates to: LHSHPAQSRMSHHPQHFHKPPLV*TWQVPL
Trigger: TAGAGGCACCTGCCATGTGCAGACTAGTGGAGGCTT...GTGAAAATGCTGTGGATGGTGTGACATTCTTGACTGAGCTGGGTGGCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACCAGATGCATTCAGGATaGAGCCTCGAGCTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHQMHSG*SLELLF
Trigger: GAACAGGAGCTCGAGGCTGCATCCTGAATGCATCTG...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCTCACCGTATTTCCACTaGATGATGTTGTCAAGGACA +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPASPYFH*MMLSRT
Trigger: TGTCCTTGACAACATCATGCAGTGGAAATACGGTGA...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAGAATGGTCGACAGTATaGGACAACAGCTGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQEWSTV*DNSCQS
Trigger: ACTCTGGCAGCTGTTGTCCCATACTGTCGACCATTC...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTGAATGGTCGACAGTATaGGACAACAGCTGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGEWSTV*DNSCQS
Trigger: ACTCTGGCAGCTGTTGTCCCATACTGTCGACCATTC...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACGAGCCTAACCAGGTGTaGTCTTGTCAAGTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHEPNQV*SCQVEP
Trigger: AGGCTCCACTTGACAAGACCACACCTGGTTAGGCTC...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CAGGTGCCTCTATCCAGACAGGACAAGCAAAGGCAAACAGTGACAGTCTTTGGCGAGCCTAACCAGGTGTaGTCTTGTCAAGTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: QVPLSRQDKQRQTVTVFGEPNQV*SCQVEP
Trigger: AGGCTCCACTTGACAAGACCACACCTGGTTAGGCTC...GCCAAAGACTGTCACTGTTTGCCTTTGCTTGTCCTGTCTGGATAGAGGCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CTCCACAGCCACCCAGCTCAGTCAAGAATGTCACACCATCCACAGCATTTTCACAACAGTGACAGTCTTTaGCTGTGCTGGGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: LHSHPAQSRMSHHPQHFHNSDSL*LCWARD
Trigger: ATCCCTGGCCCAGCACAGCCAAAGACTGTCACTGTT...GTGAAAATGCTGTGGATGGTGTGACATTCTTGACTGAGCTGGGTGGCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATACAAAGTTCACAGGATaGTGGGAATGTGGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYTKFTG*WECGLH
Trigger: GTGCAGCCCACATTCCCACCATCCTGTGAACTTTGT...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAACAAGAATGGAGGGGTTaGGGAGAGTTACAGACACAG +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQQEWRG*GELQTQ
Trigger: CTGTGTCTGTAACTCTCCCCAACCCCTCCATTCTTG...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCATTCTATTTGGCAACTaGGCAGTCACTGGTGACTTT +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPAILFGN*AVTGDF
Trigger: AAAGTCACCAGTGACTGCCCAGTTGCCAAATAGAAT...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CAA 90 bp GGCGGGCTGGTCAGAAGACTCACTTCTGATCTTTGGCTCATGAACTaGGAGAGGTTGAGAACTAGAATCTTTAAGCAGGAGGAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: GGLVRRLTSDLWLMN*ERLRTRIFKQEERP
Trigger: GGGCCTCTCCTCCTGCTTAAAGATTCTAGTTCTCAACCTCTCCAAGTTCATGAGCCAAAGATCAGAAGTGAGTCTTCTGACCAGCCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp CTCCACAGCCACCCAGCTCAGTCAAGAATGTCACACCATCCACAGCATTTTCACTCTTTTACCCACTTCTaGGCCCAGGAGGAGTTCAGA +
Preference number: 2 (lower is better)
Translates to: LHSHPAQSRMSHHPQHFHSFTHF*AQEEFR
Trigger: TCTGAACTCCTCCTGGGCTCAGAAGTGGGTAAAAGA...GTGAAAATGCTGTGGATGGTGTGACATTCTTGACTGAGCTGGGTGGCTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACAGAGGCCCAGAGGAGTaGGCTGGTTGTGGGTTACTC +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNRGPEE*AGCGLL
Trigger: GAGTAACCCACAACCAGCTCACTCCTCTGGGCCTCT...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTCTGAAGAGGATAAGCTaGAAGATGGGGAGGAATGGT +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGLKRIS*KMGRNG
Trigger: ACCATTCCTCCCCATCTTGCAGCTTATCCTCTTCAG...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAACAGGGATCACAGTCCTaGCATATGTCTAAACCTCTC +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQQGSQS*HMSKPL
Trigger: GAGAGGTTTAGACATATGGCAGGACTGTGATCCCTG...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CTCCACAGCCACCCAGCTCAGTCAAGAATGTCACACCATCCACAGCATTTTCACCAAGATGGGGAGGAATaGTCGACAGTATGGGACAAC +
Preference number: 2 (lower is better)
Translates to: LHSHPAQSRMSHHPQHFHQDGEE*STVWDN
Trigger: GTTGTCCCATACTGTCGACCATTCCTCCCCATCTTG...GTGAAAATGCTGTGGATGGTGTGACATTCTTGACTGAGCTGGGTGGCTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACGTTCAGATGTATACATaGCTCCTGAGCCCTGGACAC +
Preference number: 2 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHVQMYT*LLSPGH
Trigger: GTGTCCAGGGCTCAGGAGCCATGTATACATCTGAAC...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTACCAGAAGATTTAAGTaGTCTCTCCACAGCCACCCA +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGTRRFK*SLHSHP
Trigger: TGGGTGGCTGTGGAGAGACCACTTAAATCTTCTGGT...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACTACTCTCTCCACCCATaGAACTCTGGACCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHYSLHP*NSGPEA
Trigger: TGCTTCAGGTCCAGAGTTCCATGGGTGGAGAGAGTA...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CTCCTGTTCCCATGGCTTCCAGAATGCTTCTCTCTGCATTCTAGGAGAACTAAGCCCAGAGGAGTGAGCTaGTTGTGGGTTACTCTCTCC +
Preference number: 2 (lower is better)
Translates to: LLFPWLPECFSLHSRRTKPRGVS*LWVTLS
Trigger: GGAGAGAGTAACCCACAACCAGCTCACTCCTCTGGG...CTTAGTTCTCCTAGAATGCAGAGAGAAGCATTCTGGAAGCCATGGGAACAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAACTGAGGTCATGGAAATaGACTAAAGGAGCAGGGCAA +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQLRSWK*TKGAGQ
Trigger: TTGCCCTGCTCCTTTAGTCCATTTCCATGACCTCAG...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp CTCCACAGCCACCCAGCTCAGTCAAGAATGTCACACCATCCACAGCATTTTCACCTGAAGAGGATAAGCTaGAAGATGGGGAGGAATGGT +
Preference number: 2 (lower is better)
Translates to: LHSHPAQSRMSHHPQHFHLKRIS*KMGRNG
Trigger: ACCATTCCTCCCCATCTTGCAGCTTATCCTCTTCAG...GTGAAAATGCTGTGGATGGTGTGACATTCTTGACTGAGCTGGGTGGCTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp CAGGTGCCTCTATCCAGACAGGACAAGCAAAGGCAAACAGTGACAGTCTTTGGCCAGGGATCACAGTCCTaGCATATGTCTAAACCTCTC +
Preference number: 2 (lower is better)
Translates to: QVPLSRQDKQRQTVTVFGQGSQS*HMSKPL
Trigger: GAGAGGTTTAGACATATGGCAGGACTGTGATCCCTG...GCCAAAGACTGTCACTGTTTGCCTTTGCTTGTCCTGTCTGGATAGAGGCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACCAGGGATCACAGTCCTaGCATATGTCTAAACCTCTC +
Preference number: 2 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHQGSQS*HMSKPL
Trigger: GAGAGGTTTAGACATATGGCAGGACTGTGATCCCTG...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp AATAAGTCAAAAGCAGGATCAGCCCAAATGTTAATGAAGAGCCTCTGCAGGCAGCGAGGGCCATGCAGATaGATTCAGGATGCAGCCTCG +
Preference number: 2 (lower is better)
Translates to: NKSKAGSAQMLMKSLCRQRGPCR*IQDAAS
Trigger: CGAGGCTGCATCCTGAATGCATCTGCATGGCCCTCG...CTGCCTGCAGAGGCTCTTCATTAACATTTGGGCTGATCCTGCTTTTGACTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTACAACACTCACCAGTTaGCCAACACCAAGTACAACA +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGTTLTS*PTPSTT
Trigger: TGTTGTACTTGGTGTTGGGCAACTGGTGAGTGTTGT...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATTGTGGAAGAGTGCTCTaGAAGTTCATCCTGAACCAA +
Preference number: 2 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYCGRVL*KFILNQ
Trigger: TTGGTTCAGGATGAACTTGCAGAGCACTCTTCCACA...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCACAGACTCTGAGAAATaGTGTTTTAATCTTGTGGAG +
Preference number: 2 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPATDSEK*CFNLVE
Trigger: CTCCACAAGATTAAAACAGCATTTCTCAGAGTCTGT...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACGCAGGCTCTAACTGGTaGAGGATCATGGTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNAGSNW*RIMVRS
Trigger: GCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGC...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACAGTCTTTGGCTGTGCTaGGCCAGGGATCACAGTCCT +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNSLWLC*ARDHSP
Trigger: AGGACTGTGATCCCTGGCCCAGCACAGCCAAAGACT...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACAGGATGGTGGGAATGTaGGCTGCACAAAGGAAAGAT +
Preference number: 2 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHRMVGM*AAQRKD
Trigger: ATCTTTCCTTTGTGCAGCCCACATTCCCACCATCCT...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACACAGAGGGCGGGCTCTaGAGTGGACATCTTACTAAG +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNTEGGL*SGHLTK
Trigger: CTTAGTAAGATGTCCACTTCAGAGCCCGCCCTCTGT...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACATGGAACTCTGGACCTaGAGCAGACAGCAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNMELWT*SRQQLS
Trigger: AGACAGCTGCTGTCTGCTTCAGGTCCAGAGTTCCAT...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACCAGGAATTAGTGACATaGGAACAGAGGGTACTTTGC +
Preference number: 2 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHQELVT*EQRVLC
Trigger: GCAAAGTACCCTCTGTTCTCATGTCACTAATTCCTG...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTCGTATTTCCACTGCATaGTGTTGTCAAGGACAAAAG +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGRISTA*CCQGQK
Trigger: CTTTTGTCCTTGACAACATCATGCAGTGGAAATACG...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTTCCCCTTGCATCAACTaGAGCCATTTTACTGTCTTA +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGSPCIN*SHFTVL
Trigger: TAAGACAGTAAAATGGCTTCAGTTGATGCAAGGGGA...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAATCCCCTTGCATCAACTaGAGCCATTTTACTGTCTTA +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQSPCIN*SHFTVL
Trigger: TAAGACAGTAAAATGGCTTCAGTTGATGCAAGGGGA...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACTCCACACCCTTGGGCTaGCTTAGATGGGGTCTCTTA +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNSTPLG*LRWGLL
Trigger: TAAGAGACCCCATCTAAGTCAGCCCAAGGGTGTGGA...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp AATAAGTCAAAAGCAGGATCAGCCCAAATGTTAATGAAGAGCCTCTGCAGGCAGGTATGGGACAACAGCTaGCAGAGTGCCCAGTCTCCT +
Preference number: 2 (lower is better)
Translates to: NKSKAGSAQMLMKSLCRQVWDNS*QSAQSP
Trigger: AGGAGACTGGGCACTCTGGCAGCTGTTGTCCCATAC...CTGCCTGCAGAGGCTCTTCATTAACATTTGGGCTGATCCTGCTTTTGACTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ACAGTTCAACAAGACTCATCTACCATCCACACTCTGAAGAGGATAAGCTGCAAGGTATGGGACAACAGCTaGCAGAGTGCCCAGTCTCCT +
Preference number: 2 (lower is better)
Translates to: TVQQDSSTIHTLKRISCKVWDNS*QSAQSP
Trigger: AGGAGACTGGGCACTCTGGCAGCTGTTGTCCCATAC...CTTGCAGCTTATCCTCTTCAGAGTGTGGATGGTAGATGAGTCTTGTTGAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATCCAAGGGGCATGGTTTaGTTTAAAGTGAAGATGATC +
Preference number: 2 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYPRGMV*FKVKMI
Trigger: GATCATCTTCACTTTAAAGCAAACCATGCCCCTTGG...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAACCTAAGTCCAAAGATTaGCGGACTAGTAAAGCATTC +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQPKSKD*RTSKAF
Trigger: GAATGCTTTACTAGTCCGGCAATCTTTGGACTTAGG...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTTCACCGTATTTCCACTaGATGATGTTGTCAAGGACA +
Preference number: 2 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGSPYFH*MMLSRT
Trigger: TGTCCTTGACAACATCATGCAGTGGAAATACGGTGA...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACGGTGGTGTGAAATGCTaGGGAGAGGTCAAGACAGCT +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNGGVKC*GEVKTA
Trigger: AGCTGTCTTGACCTCTCCGCAGCATTTCACACCACC...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACGTGGGTGGTGTGAAATaGTGCGGAGAGGTCAAGACA +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNVGGVK*CGEVKT
Trigger: TGTCTTGACCTCTCCGCAGCATTTCACACCACCCAC...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CTCCTGTTCCCATGGCTTCCAGAATGCTTCTCTCTGCATTCTAGGAGAACTAAGGTTCAGATGTATACATaGCTCCTGAGCCCTGGACAC +
Preference number: 2 (lower is better)
Translates to: LLFPWLPECFSLHSRRTKVQMYT*LLSPGH
Trigger: GTGTCCAGGGCTCAGGAGCCATGTATACATCTGAAC...CTTAGTTCTCCTAGAATGCAGAGAGAAGCATTCTGGAAGCCATGGGAACAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp AGTATTCACAAGCAGAACTCACGATCCATACCTCTGAATGAGGATGATGAAGGGAGTCTTTGGCTGTGCTaGGCCAGGGATCACAGTCCT +
Preference number: 2 (lower is better)
Translates to: SIHKQNSRSIPLNEDDEGSLWLC*ARDHSP
Trigger: AGGACTGTGATCCCTGGCCCAGCACAGCCAAAGACT...CCCTTCATCATCCTCATTCAGAGGTATGGATCGTGAGTTCTGCTTGTGAATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CTCCTGTTCCCATGGCTTCCAGAATGCTTCTCTCTGCATTCTAGGAGAACTAAGTACTCTCTCCACCCATaGAACTCTGGACCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: LLFPWLPECFSLHSRRTKYSLHP*NSGPEA
Trigger: TGCTTCAGGTCCAGAGTTCCATGGGTGGAGAGAGTA...CTTAGTTCTCCTAGAATGCAGAGAGAAGCATTCTGGAAGCCATGGGAACAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACGGAGTGAGCTGGTTGTaGGTTACTCTCTCCACCCAT +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNGVSWL*VTLSTH
Trigger: ATGGGTGGAGAGAGTAACCCACAACCAGCTCACTCC...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACCTATGTTGGCCAGGCTaGTCTCGAACTGCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNLCWPG*SRTAVL
Trigger: AAGGACAGCAGTTCGAGACCAGCCTGGCCAACATAG...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CAA 90 bp GTCAGAAGACTCACTTCTGATCTTTGGCTCATGAACTTGGAGAGGTaGAGAACTAGAATCTTTAAGCAGGAGGAGAGGCCCAGAGGAGTG +
Preference number: 2 (lower is better)
Translates to: VRRLTSDLWLMNLER*RTRIFKQEERPRGV
Trigger: CACTCCTCTGGGCCTCTCCTCCTGCTTAAAGATTCTAGTTCTCAACCTCTCCAAGTTCATGAGCCAAAGATCAGAAGTGAGTCTTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAGCAAAACAAATACCCTaGAAACCGTTAGAACCCAAA +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQAKQIP*KPLEPK
Trigger: TTTGGGTTCTAACGGTTTTCAGGGTATTTGTTTTGC...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp AGTATTCACAAGCAGAACTCACGATCCATACCTCTGAATGAGGATGATGAAGGGACAGAGGGCGGGCTCTaGAGTGGACATCTTACTAAG +
Preference number: 2 (lower is better)
Translates to: SIHKQNSRSIPLNEDDEGTEGGL*SGHLTK
Trigger: CTTAGTAAGATGTCCACTTCAGAGCCCGCCCTCTGT...CCCTTCATCATCCTCATTCAGAGGTATGGATCGTGAGTTCTGCTTGTGAATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp AATAAGTCAAAAGCAGGATCAGCCCAAATGTTAATGAAGAGCCTCTGCAGGCAGGTCTCCAATTGCTCCTaGGGAAGGATCAGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: NKSKAGSAQMLMKSLCRQVSNCS*GRIRSE
Trigger: CTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGAC...CTGCCTGCAGAGGCTCTTCATTAACATTTGGGCTGATCCTGCTTTTGACTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACGTGTTGATACCAGCTTaGGCAACATGGCGAAACTCC +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNVLIPA*ATWRNS
Trigger: GGAGTTTCGCCATGTTGCTCAAGCTGGTATCAACAC...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp CAGGTGCCTCTATCCAGACAGGACAAGCAAAGGCAAACAGTGACAGTCTTTGGCCGGCTCCCAAATAAATaGTGTAGATGCAAATGGCAA +
Preference number: 2 (lower is better)
Translates to: QVPLSRQDKQRQTVTVFGRLPNK*CRCKWQ
Trigger: TTGCCATTTGCATCTACAGCATTTATTTGGGAGCCG...GCCAAAGACTGTCACTGTTTGCCTTTGCTTGTCCTGTCTGGATAGAGGCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACCCTAAGTCCAAAGATTaGCGGACTAGTAAAGCATTC +
Preference number: 2 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHPKSKD*RTSKAF
Trigger: GAATGCTTTACTAGTCCGGCAATCTTTGGACTTAGG...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CAGGTGCCTCTATCCAGACAGGACAAGCAAAGGCAAACAGTGACAGTCTTTGGCTGCTGTAGATGCAAATaGCAAAGAAGAGCACTACAC +
Preference number: 2 (lower is better)
Translates to: QVPLSRQDKQRQTVTVFGCCRCK*QRRALH
Trigger: GTGTAGTGCTCTTCTTTGCCATTTGCATCTACAGCA...GCCAAAGACTGTCACTGTTTGCCTTTGCTTGTCCTGTCTGGATAGAGGCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp CTCCACAGCCACCCAGCTCAGTCAAGAATGTCACACCATCCACAGCATTTTCACTGCTGTAGATGCAAATaGCAAAGAAGAGCACTACAC +
Preference number: 2 (lower is better)
Translates to: LHSHPAQSRMSHHPQHFHCCRCK*QRRALH
Trigger: GTGTAGTGCTCTTCTTTGCCATTTGCATCTACAGCA...GTGAAAATGCTGTGGATGGTGTGACATTCTTGACTGAGCTGGGTGGCTGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACGTTCAGATGTATACATaGCTCCTGAGCCCTGGACAC +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNVQMYT*LLSPGH
Trigger: GTGTCCAGGGCTCAGGAGCCATGTATACATCTGAAC...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp AGTATTCACAAGCAGAACTCACGATCCATACCTCTGAATGAGGATGATGAAGGGAACAGTGACAGTCTTTaGCTGTGCTGGGCCAGGGAT +
Preference number: 2 (lower is better)
Translates to: SIHKQNSRSIPLNEDDEGNSDSL*LCWARD
Trigger: ATCCCTGGCCCAGCACAGCCAAAGACTGTCACTGTT...CCCTTCATCATCCTCATTCAGAGGTATGGATCGTGAGTTCTGCTTGTGAATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAATCTGCTTTAAATTTGTaGTCTCCAATTGCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQSALNL*SPIAPE
Trigger: CTCAGGAGCAATTGGAGACCACAAATTTAAAGCAGA...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp AATAAGTCAAAAGCAGGATCAGCCCAAATGTTAATGAAGAGCCTCTGCAGGCAGAGGCCACACCCAAGCTaGGAGCCTCACTCATATAAG +
Preference number: 2 (lower is better)
Translates to: NKSKAGSAQMLMKSLCRQRPHPS*EPHSYK
Trigger: CTTATATGAGTGAGGCTCCCAGCTTGGGTGTGGCCT...CTGCCTGCAGAGGCTCTTCATTAACATTTGGGCTGATCCTGCTTTTGACTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp AGTATTCACAAGCAGAACTCACGATCCATACCTCTGAATGAGGATGATGAAGGGTCTTTTACCCACTTCTaGGCCCAGGAGGAGTTCAGA +
Preference number: 2 (lower is better)
Translates to: SIHKQNSRSIPLNEDDEGSFTHF*AQEEFR
Trigger: TCTGAACTCCTCCTGGGCTCAGAAGTGGGTAAAAGA...CCCTTCATCATCCTCATTCAGAGGTATGGATCGTGAGTTCTGCTTGTGAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAATCTGTAAGTGAAATCTaGACCAGAAGATTTAAGTGG +
Preference number: 2 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQSVSEI*TRRFKW
Trigger: CCACTTAAATCTTCTGGTTCAGATTTCACTTACAGA...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp AATAAGTCAAAAGCAGGATCAGCCCAAATGTTAATGAAGAGCCTCTGCAGGCAGAAATTAGCCATGCAATaGCAGGACCAGGGAGAGCTG +
Preference number: 2 (lower is better)
Translates to: NKSKAGSAQMLMKSLCRQKLAMQ*QDQGEL
Trigger: CAGCTCTCCCTGGTCCTGTCATTGCATGGCTAATTT...CTGCCTGCAGAGGCTCTTCATTAACATTTGGGCTGATCCTGCTTTTGACTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACAGGAGATTCAAAAATTaGAAGGGAAATGACCAGACC +
Preference number: 2 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHRRFKN*KGNDQT
Trigger: GGTCTGGTCATTTCCCTTTCAATTTTTGAATCTCCT...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp ACAGTTCAACAAGACTCATCTACCATCCACACTCTGAAGAGGATAAGCTGCAAGGAATGGTCGACAGTATaGGACAACAGCTGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: TVQQDSSTIHTLKRISCKEWSTV*DNSCQS
Trigger: ACTCTGGCAGCTGTTGTCCCATACTGTCGACCATTC...CTTGCAGCTTATCCTCTTCAGAGTGTGGATGGTAGATGAGTCTTGTTGAACTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp AATAAGTCAAAAGCAGGATCAGCCCAAATGTTAATGAAGAGCCTCTGCAGGCAGCAAGATGGGGAGGAATaGTCGACAGTATGGGACAAC +
Preference number: 2 (lower is better)
Translates to: NKSKAGSAQMLMKSLCRQQDGEE*STVWDN
Trigger: GTTGTCCCATACTGTCGACCATTCCTCCCCATCTTG...CTGCCTGCAGAGGCTCTTCATTAACATTTGGGCTGATCCTGCTTTTGACTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp ATTTTCACAGCAGCCACCTATGTCAACATCAGGAAAGTGACTATGCAAAACAAAGTATGGGACAACAGCTaGCAGAGTGCCCAGTCTCCT +
Preference number: 2 (lower is better)
Translates to: IFTAATYVNIRKVTMQNKVWDNS*QSAQSP
Trigger: AGGAGACTGGGCACTCTGGCAGCTGTTGTCCCATAC...TTTGTTTTGCATAGTCACTTTCCTGATGTTGACATAGGTGGCTGCTGTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACCTCACTTCTGATCTTTaGCTCATGAACTTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNLTSDL*LMNLER
Trigger: CCTCTCCAAGTTCATGAGCCAAAGATCAGAAGTGAG...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACGATGATCTCTCAGGTTaGGTAGAGAAGGAAATGAGC +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNDDLSG*VEKEMS
Trigger: GCTCATTTCCTTCTCTACCCAACCTGAGAGATCATC...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACGCAAAGGCTCAATTCTaGCGTTCAGAAAGGAAGACT +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNAKAQF*RSERKT
Trigger: AGTCTTCCTTTCTGAACGCCAGAATTGAGCCTTTGC...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACCAAATAGGCACAAATTaGGACCTATGGCCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNQIGTN*DLWPLE
Trigger: TTCTAGAGGCCATAGGTCTCAATTTGTGCCTATTTG...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp CTCCTGTTCCCATGGCTTCCAGAATGCTTCTCTCTGCATTCTAGGAGAACTAAGGCAAAACAAATACCCTaGAAACCGTTAGAACCCAAA +
Preference number: 2 (lower is better)
Translates to: LLFPWLPECFSLHSRRTKAKQIP*KPLEPK
Trigger: TTTGGGTTCTAACGGTTTTCAGGGTATTTGTTTTGC...CTTAGTTCTCCTAGAATGCAGAGAGAAGCATTCTGGAAGCCATGGGAACAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACTGCACAAAGGAAAGATaGCCTAGAGCAGGAATTAGT +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNCTKER*PRAGIS
Trigger: ACTAATTCCTGCTCTAGGTCATCTTTCCTTTGTGCA...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACTTTTTCTGGATTCTCTaGGAATCCAGAGACTTGTGG +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNFFWIL*ESRDLW
Trigger: CCACAAGTCTCTGGATTCTCAGAGAATCCAGAAAAA...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp AATAAGTCAAAAGCAGGATCAGCCCAAATGTTAATGAAGAGCCTCTGCAGGCAGCTCACTTCTGATCTTTaGCTCATGAACTTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: NKSKAGSAQMLMKSLCRQLTSDL*LMNLER
Trigger: CCTCTCCAAGTTCATGAGCCAAAGATCAGAAGTGAG...CTGCCTGCAGAGGCTCTTCATTAACATTTGGGCTGATCCTGCTTTTGACTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CAA 90 bp GCGGAGAGGTCAAGACAGCTGAGCACTGAAAGGTATTCATTCTATTaGGCAACTGGGCAGTCACTGGTGACTTTTATGAAAAAGTATAGA +
Preference number: 2 (lower is better)
Translates to: AERSRQLSTERYSFY*ATGQSLVTFMKKYR
Trigger: TCTATACTTTTTCATAAAAGTCACCAGTGACTGCCCAGTTGCCAAATAGAATGAATACCTTTCAGTGCTCAGCTGTCTTGACCTCTCCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp ATTTTCACAGCAGCCACCTATGTCAACATCAGGAAAGTGACTATGCAAAACAAAAGCAAAGGCAAACAGTaGCAGTCTTTGGCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: IFTAATYVNIRKVTMQNKSKGKQ*QSLAVL
Trigger: CAGCACAGCCAAAGACTGTCACTGTTTGCCTTTGCT...TTTGTTTTGCATAGTCACTTTCCTGATGTTGACATAGGTGGCTGCTGTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp CTCCTGTTCCCATGGCTTCCAGAATGCTTCTCTCTGCATTCTAGGAGAACTAAGTCTGTAAGTGAAATCTaGACCAGAAGATTTAAGTGG +
Preference number: 2 (lower is better)
Translates to: LLFPWLPECFSLHSRRTKSVSEI*TRRFKW
Trigger: CCACTTAAATCTTCTGGTTCAGATTTCACTTACAGA...CTTAGTTCTCCTAGAATGCAGAGAGAAGCATTCTGGAAGCCATGGGAACAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR GCA 90 bp AATAAGTCAAAAGCAGGATCAGCCCAAATGTTAATGAAGAGCCTCTGCAGGCAGCGGCTCCCAAATAAATaGTGTAGATGCAAATGGCAA +
Preference number: 2 (lower is better)
Translates to: NKSKAGSAQMLMKSLCRQRLPNK*CRCKWQ
Trigger: TTGCCATTTGCATCTACAGCATTTATTTGGGAGCCG...CTGCCTGCAGAGGCTCTTCATTAACATTTGGGCTGATCCTGCTTTTGACTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp AATAAGTCAAAAGCAGGATCAGCCCAAATGTTAATGAAGAGCCTCTGCAGGCAGCAACAATATGAGCAATaGGTTCCTTCTCAACCAAGC +
Preference number: 2 (lower is better)
Translates to: NKSKAGSAQMLMKSLCRQQQYEQ*VPSQPS
Trigger: GCTTGGTTGAGAAGGAACCCATTGCTCATATTGTTG...CTGCCTGCAGAGGCTCTTCATTAACATTTGGGCTGATCCTGCTTTTGACTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CAA 90 bp CATATAAGGAAAGCCAAGCTTTTAACAGGTATTTCTGCTTTAAATTaGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: HIRKAKLLTGISALN*WSPIAPEEGSGLSL
Trigger: CAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAAATTTAAAGCAGAAATACCTGTTAAAAGCTTGGCTTTCCTTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACTCTGTAAGTGAAATCTaGACCAGAAGATTTAAGTGG +
Preference number: 2 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNSVSEI*TRRFKW
Trigger: CCACTTAAATCTTCTGGTTCAGATTTCACTTACAGA...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR TCA 90 bp ATTTTCACAGCAGCCACCTATGTCAACATCAGGAAAGTGACTATGCAAAACAAACAAATAGGCACAAATTaGGACCTATGGCCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: IFTAATYVNIRKVTMQNKQIGTN*DLWPLE
Trigger: TTCTAGAGGCCATAGGTCTCAATTTGTGCCTATTTG...TTTGTTTTGCATAGTCACTTTCCTGATGTTGACATAGGTGGCTGCTGTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CCA 90 bp ATTTTCACAGCAGCCACCTATGTCAACATCAGGAAAGTGACTATGCAAAACAAATGCTGTAGATGCAAATaGCAAAGAAGAGCACTACAC +
Preference number: 2 (lower is better)
Translates to: IFTAATYVNIRKVTMQNKCCRCK*QRRALH
Trigger: GTGTAGTGCTCTTCTTTGCCATTTGCATCTACAGCA...TTTGTTTTGCATAGTCACTTTCCTGATGTTGACATAGGTGGCTGCTGTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 72 bp TTACTAAGACCCCCTCTGGCCCAGCAAGCTGATCCGTaGGCCCAGGAGGCCACACCCAAGCTGGGAGCCTCA +
Preference number: 3 (lower is better)
Translates to: LLRPPLAQQADP*AQEATPKLGAS
Trigger: TGAGGCTCCCAGCTTGGGTGTGGCCTCCTGGGCTCACGGATCAGCTTGCTGGGCCAGAGGGGGTCTTAGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp ATCCCAGGCTCCTTCCCAACTACAGCAGGCTCTAACTaGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCC +
Preference number: 3 (lower is better)
Translates to: IPGSFPTTAGSN*CRIMVRSCPPA
Trigger: GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGTTGGGAAGGAGCCTGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTCAACCAAGCCCTTGCTaGGGAGGTAGCCTGACCTCC +
Preference number: 3 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGQPSPC*GGSLTS
Trigger: GGAGGTCAGGCTACCTCCCAAGCAAGGGCTTGGTTG...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 72 bp CTCCATCCGAATGTTATCAGCAGCAGGCACCCACCCTaGCAGGTTCTCCTCCTGGTTAGCAGCACTGACATG +
Preference number: 3 (lower is better)
Translates to: LHPNVISSRHPP*QVLLLVSSTDM
Trigger: CATGTCAGTGCTGCTAACCAGGAGGAGAACCTGGCAGGGTGGGTGCCTGCTGCTGATAACATTCGGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 72 bp AGTATCCTCACAAACACCCTGCGAGGGCCATGCAGATaGATTCAGGATGCAGCCTCGAGCTCCTGTTCCCAT +
Preference number: 3 (lower is better)
Translates to: SILTNTLRGPCR*IQDAASSSCSH
Trigger: ATGGGAACAGGAGCTCGAGGCTGCATCCTGAATGCATCTGCATGGCCCTCGCAGGGTGTTTGTGAGGATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 72 bp GGACTGCCATGGAACAGAGCATATGGAAGGTATGGTTaGCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGT +
Preference number: 3 (lower is better)
Translates to: GLPWNRAYGRYG*HSGRGPRGRQG
Trigger: ACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCATATGCTCTGTTCCATGGCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 72 bp CCTGCCAGGTTCTCCTCCTGGTTAGCAGCACTGACATaGACGGAAACACATCTTACCACAATCCCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: PARFSSWLAALT*TETHLTTIPGS
Trigger: GGAGCCTGGGATTGTGGTAAGATGTGTTTCCGTGCATGTCAGTGCTGCTAACCAGGAGGAGAACCTGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp AGGAGTGAGCTGGTTGTGGGTTACTCTCTCCACCCATaGAACTCTGGACCTGAAGCAGACAGCAGCTGTCTC +
Preference number: 3 (lower is better)
Translates to: RSELVVGYSLHP*NSGPEADSSCL
Trigger: GAGACAGCTGCTGTCTGCTTCAGGTCCAGAGTTCCATGGGTGGAGAGAGTAACCCACAACCAGCTCACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATAGAGGAGTGAGCTGGTaGTGGGTTACTCTCTCCACC +
Preference number: 3 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYRGVSW*WVTLST
Trigger: GGTGGAGAGAGTAACCCACAACCAGCTCACTCCTCT...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTAGAGGAGTGAGCTGGTaGTGGGTTACTCTCTCCACC +
Preference number: 3 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGRGVSW*WVTLST
Trigger: GGTGGAGAGAGTAACCCACAACCAGCTCACTCCTCT...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCATTTGTGGTCTCCAATaGCTCCTGAGGAAGGATCAG +
Preference number: 3 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPAICGLQ*LLRKDQ
Trigger: CTGATCCTTCCTCAGGAGCAATTGGAGACCACAAAT...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCAATCTTGTGGAGAACTaGTTTGCAGGCTGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPANLVEN*FAGCVE
Trigger: CTCCACACAGCCTGCAAACAAGTTCTCCACAAGATT...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 72 bp TGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTaGGCCTGTCACAACACTCACCAGTTGCCCAACACC +
Preference number: 3 (lower is better)
Translates to: CGLQLLLRKDQV*ACHNTHQLPNT
Trigger: GGTGTTGGGCAACTGGTGAGTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp CACTCTGAAGAGGATAAGCTGCAAGATGGGGAGGAATaGTCGACAGTATGGGACAACAGCTGCCAGAGTGCC +
Preference number: 3 (lower is better)
Translates to: HSEEDKLQDGEE*STVWDNSCQSA
Trigger: GGCACTCTGGCAGCTGTTGTCCCATACTGTCGACCATTCCTCCCCATCTTGCAGCTTATCCTCTTCAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp CAGACAGGACAAGCAAAGGCAAACAGTGACAGTCTTTaGCTGTGCTGGGCCAGGGATCACAGTCCTGCCATA +
Preference number: 3 (lower is better)
Translates to: QTGQAKANSDSL*LCWARDHSPAI
Trigger: TATGGCAGGACTGTGATCCCTGGCCCAGCACAGCCAAAGACTGTCACTGTTTGCCTTTGCTTGTCCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp GAAAACGGGATCACGGAAGCCCATCTGCTTAGAACGTaGCATGTGCTGCTGAAAGAATGGCAAGCCAAGGGG +
Preference number: 3 (lower is better)
Translates to: ENGITEAHLLRT*HVLLKEWQAKG
Trigger: CCCCTTGGCTTGCCATTCTTTCAGCAGCACATGCCACGTTCTAAGCAGATGGGCTTCCGTGATCCCGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp AAGCAACCAATAGCTGCCTCCAACTCCAGAAACAACTaGAGCAAGCAGGTGGTGGTGATCAGCACAGGTGGG +
Preference number: 3 (lower is better)
Translates to: KQPIAASNSRNN*SKQVVVISTGG
Trigger: CCCACCTGTGCTGATCACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTGCAAGAATGGAGGGGTaGGGGAGAGTTACAGACACA +
Preference number: 3 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGARMEG*GRVTDT
Trigger: TGTGTCTGTAACTCTCCCCAACCCCTCCATTCTTGC...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAGCAAGAATGGAGGGGTaGGGGAGAGTTACAGACACA +
Preference number: 3 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQARMEG*GRVTDT
Trigger: TGTGTCTGTAACTCTCCCCAACCCCTCCATTCTTGC...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp ACTACAGCAGGCTCTAACTGGTGCAGGATCATGGTGAGGAGCTGCCCACCAGCCAGGTATTCATTCTATTaGGCAACTGGGCAGTCACTG +
Preference number: 3 (lower is better)
Translates to: TTAGSNWCRIMVRSCPPARYSFY*ATGQSL
Trigger: CAGTGACTGCCCAGTTGCCAAATAGAATGAATACCT...GGCTGGTGGGCAGCTCCTCACCATGATCCTGCACCAGTTAGAGCCTGCTGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 72 bp ACAGCCTGGAGGCGGGCTGGTCAGAAGACTCACTTCTaGTCTTTGGCTCATGAACTTGGAGAGGTTGAGAAC +
Preference number: 3 (lower is better)
Translates to: TAWRRAGQKTHF*SLAHELGEVEN
Trigger: GTTCTCAACCTCTCCAAGTTCATGAGCCAAAGATCAGAAGTGAGTCTTCTGACCAGCCCGCCTCCAGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 72 bp CGGAAGCCCATCTGCTTAGAACGTGGCATGTGCTGCTaGAAGAATGGCAAGCCAAGGGGCATGGTTTGCTTT +
Preference number: 3 (lower is better)
Translates to: RKPICLERGMCC*KNGKPRGMVCF
Trigger: AAAGCAAACCATGCCCCTTGGCTTGCCATTCTTTCAGCAGCACATGCCACGTTCTAAGCAGATGGGCTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 72 bp CAGTCTTTGGCTGTGCTGGGCCAGGGATCACAGTCCTaGCATATGTCTAAACCTCTCTCCCTTCTTTTACCC +
Preference number: 3 (lower is better)
Translates to: QSLAVLGQGSQS*HMSKPLSLLLP
Trigger: GGGTAAAAGAAGGGAGAGAGGTTTAGACATATGGCAGGACTGTGATCCCTGGCCCAGCACAGCCAAAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 72 bp GGACAAGCAAAGGCAAACAGTGACAGTCTTTGGCTGTaGTGGGCCAGGGATCACAGTCCTGCCATATGTCTA +
Preference number: 3 (lower is better)
Translates to: GQAKANSDSLWL*WARDHSPAICL
Trigger: TAGACATATGGCAGGACTGTGATCCCTGGCCCAGCACAGCCAAAGACTGTCACTGTTTGCCTTTGCTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp GATAAGCTGCAAGATGGGGAGGAATGGTCGACAGTATaGGACAACAGCTGCCAGAGTGCCCAGTCTCCTTTT +
Preference number: 3 (lower is better)
Translates to: DKLQDGEEWSTV*DNSCQSAQSPF
Trigger: AAAAGGAGACTGGGCACTCTGGCAGCTGTTGTCCCATACTGTCGACCATTCCTCCCCATCTTGCAGCTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAACTAAGGCTCTGAGGTaGCTTCATGGTCACCAAAGG +
Preference number: 3 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQTKALR*LHGHQR
Trigger: CCTTTGGTGACCATGAAGCAACCTCAGAGCCTTAGT...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATCACAACACTCACCAGTaGCCCAACACCAAGTACAAC +
Preference number: 3 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYHNTHQ*PNTKYN
Trigger: GTTGTACTTGGTGTTGGGCAACTGGTGAGTGTTGTG...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTAAGGACACTGGCTTTTaGCCTCTTGATTTTTCCCCC +
Preference number: 3 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGKDTGF*PLDFSP
Trigger: GGGGGAAAAATCAAGAGGCAAAAAGCCAGTGTCCTT...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATAGAACAGAGGGTACTTaGCCAAGCCAACTGAACAGA +
Preference number: 3 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYRTEGT*PSQLNR
Trigger: TCTGTTCAGTTGGCTTGGCAAAGTACCCTCTGTTCT...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAAGAACAGAGGGTACTTaGCCAAGCCAACTGAACAGA +
Preference number: 3 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQRTEGT*PSQLNR
Trigger: TCTGTTCAGTTGGCTTGGCAAAGTACCCTCTGTTCT...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATATTTGTGGTCTCCAATaGCTCCTGAGGAAGGATCAG +
Preference number: 3 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYICGLQ*LLRKDQ
Trigger: CTGATCCTTCCTCAGGAGCAATTGGAGACCACAAAT...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 72 bp GAACTCATCCTACATAGCCAAGAAAGGGGTACAGCTTaGGGAATGGGCATATGGCTCAGGAAGCAGCACCAG +
Preference number: 3 (lower is better)
Translates to: ELILHSQERGTA*GMGIWLRKQHQ
Trigger: CTGGTGCTGCTTCCTGAGCCATATGCCCATTCCTCAAGCTGTACCCCTTTCTTGGCTATGTAGGATGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACCCAGGCAAGGAGCTGTaGCTAGAAATGGGTACAGGG +
Preference number: 3 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNPGKEL*LEMGTG
Trigger: CCCTGTACCCATTTCTAGCAACAGCTCCTTGCCTGG...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 72 bp GTAAAGGGAGCCTCTCAGCATGCAGGCTCTCTACGATaGGAAGGGAGCATGTGTCTCTCTAGCACATTACTA +
Preference number: 3 (lower is better)
Translates to: VKGASQHAGSLR*EGSMCLSSTLL
Trigger: TAGTAATGTGCTAGAGAGACACATGCTCCCTTCTCATCGTAGAGAGCCTGCATGCTGAGAGGCTCCCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 72 bp GACTCATCTACCATCCACACTCTGAAGAGGATAAGCTaGAAGATGGGGAGGAATGGTCGACAGTATGGGACA +
Preference number: 3 (lower is better)
Translates to: DSSTIHTLKRIS*KMGRNGRQYGT
Trigger: TGTCCCATACTGTCGACCATTCCTCCCCATCTTGCAGCTTATCCTCTTCAGAGTGTGGATGGTAGATGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 72 bp AGGATCAGGTCTGAGCCTGTCACAACACTCACCAGTTaGCCAACACCAAGTACAACAAAGTTCACAGGATGG +
Preference number: 3 (lower is better)
Translates to: RIRSEPVTTLTS*PTPSTTKFTGW
Trigger: CCATCCTGTGAACTTTGTTGTACTTGGTGTTGGGCAACTGGTGAGTGTTGTGACAGGCTCAGACCTGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp GGAGGCGGGCTGGTCAGAAGACTCACTTCTGATCTTTaGCTCATGAACTTGGAGAGGTTGAGAACTAGAATC +
Preference number: 3 (lower is better)
Translates to: GGGLVRRLTSDL*LMNLERLRTRI
Trigger: GATTCTAGTTCTCAACCTCTCCAAGTTCATGAGCCAAAGATCAGAAGTGAGTCTTCTGACCAGCCCGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp TTGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGTCTGAGCCTGTCACAACACCCAAATAGGCACAAATaGAGACCTATGGCCTCTAGA +
Preference number: 3 (lower is better)
Translates to: LWSPIAPEEGSGLSLSQHPNRHK*RPMASR
Trigger: TCTAGAGGCCATAGGTCTCAATTTGTGCCTATTTGG...GTGTTGTGACAGGCTCAGACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 72 bp CAGGATGGTGGGAATGTGGGCTGCACAAAGGAAAGATaGCCTAGAGCAGGAATTAGTGACATGAGAACAGAG +
Preference number: 3 (lower is better)
Translates to: QDGGNVGCTKER*PRAGISDMRTE
Trigger: CTCTGTTCTCATGTCACTAATTCCTGCTCTAGGTCATCTTTCCTTTGTGCAGCCCACATTCCCACCATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR TCA 72 bp GTGAAATGCTGCGGAGAGGTCAAGACAGCTGAGCACTaGAAGGTATTCATTCTATTTGGCAACTGGGCAGTC +
Preference number: 3 (lower is better)
Translates to: VKCCGEVKTAEH*KVFILFGNWAV
Trigger: GACTGCCCAGTTGCCAAATAGAATGAATACCTTTCAGTGCTCAGCTGTCTTGACCTCTCCGCAGCATTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp AGTTGCCCAACACCAAGTACAACAAAGTTCACAGGATaGTGGGAATGTGGGCTGCACAAAGGAAAGATGACC +
Preference number: 3 (lower is better)
Translates to: SCPTPSTTKFTG*WECGLHKGKMT
Trigger: GGTCATCTTTCCTTTGTGCAGCCCACATTCCCACCATCCTGTGAACTTTGTTGTACTTGGTGTTGGGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp CTCCTGTTCCCATGGCTTCCAGAATGCTTCTCTCTGCATTCTAGGAGAACTAAGAAGGACACTGGCTTTTaGCCTCTTGATTTTTCCCCC +
Preference number: 3 (lower is better)
Translates to: LLFPWLPECFSLHSRRTKKDTGF*PLDFSP
Trigger: GGGGGAAAAATCAAGAGGCAAAAAGCCAGTGTCCTT...CTTAGTTCTCCTAGAATGCAGAGAGAAGCATTCTGGAAGCCATGGGAACAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp CTCCTGTTCCCATGGCTTCCAGAATGCTTCTCTCTGCATTCTAGGAGAACTAAGCTTTGGCTCATGAACTaGGAGAGGTTGAGAACTAGA +
Preference number: 3 (lower is better)
Translates to: LLFPWLPECFSLHSRRTKLWLMN*ERLRTR
Trigger: TCTAGTTCTCAACCTCTCCAAGTTCATGAGCCAAAG...CTTAGTTCTCCTAGAATGCAGAGAGAAGCATTCTGGAAGCCATGGGAACAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp GAGGTTGTTTCACTGAGGGTTGGTGGGTGGTGTGAAATGCTGCGGAGAGGTCAAATTTCTGCTTTAAATTaGTGGTCTCCAATTGCTCCT +
Preference number: 3 (lower is better)
Translates to: EVVSLRVGGWCEMLRRGQISALN*WSPIAP
Trigger: AGGAGCAATTGGAGACCACAAATTTAAAGCAGAAAT...TTGACCTCTCCGCAGCATTTCACACCACCCACCAACCCTCAGTGAAACAACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACCAAGGACAAAAGGACTaGGCTGACTTCAAAACTGGG +
Preference number: 3 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNQGQKD*ADFKTG
Trigger: CCCAGTTTTGAAGTCAGCCAAGTCCTTTTGTCCTTG...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp ATGGAAGGTATGGTTGCCACTCAGGTAGGGGTCCTAGAGGCAGGCAAGGTGTATTTAACTAAAATCCCCTaGCATCAACTGAAGCCATTT +
Preference number: 3 (lower is better)
Translates to: MEGMVATQVGVLEAGKVYLTKIP*HQLKPF
Trigger: AAATGGCTTCAGTTGATGCAAGGGGATTTTAGTTAA...ATACACCTTGCCTGCCTCTAGGACCCCTACCTGAGTGGCAACCATACCTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp GCAACCAATAGCTGCCTCCAACTCCAGAAACAACTGGAGCAAGCAGGTGGTGGTAATGCTGTTTTAATCTaGTGGAGAACTTGTTTGCAG +
Preference number: 3 (lower is better)
Translates to: ATNSCLQLQKQLEQAGGGNAVLI*WRTCLQ
Trigger: CTGCAAACAAGTTCTCCACAAGATTAAAACAGCATT...ACCACCACCTGCTTGCTCCAGTTGTTTCTGGAGTTGGAGGCAGCTATTGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR GCA 72 bp GTGAGTCTCAAAGGGCAGAAGCCTAAGTCCAAAGATTaGCGGACTAGTAAAGCATTCAAGACTCAGTTACCC +
Preference number: 3 (lower is better)
Translates to: VSLKGQKPKSKD*RTSKAFKTQLP
Trigger: GGGTAACTGAGTCTTGAATGCTTTACTAGTCCGGCAATCTTTGGACTTAGGCTTCTGCCCTTTGAGACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp CCAAGGAAAGTAGGTTTTCCCGAGCCTAACCAGGTGTaGTCTTGTCAAGTGGAGCCTATACATCTGATTACT +
Preference number: 3 (lower is better)
Translates to: PRKVGFPEPNQV*SCQVEPIHLIT
Trigger: AGTAATCAGATGTATAGGCTCCACTTGACAAGACCACACCTGGTTAGGCTCGGGAAAACCTACTTTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp TATACCTCCTTACCTCCAAGAAAGCAACCAATAGCTGCCTCCAACTCCAGAAACCCAAATAGGCACAAATaGAGACCTATGGCCTCTAGA +
Preference number: 3 (lower is better)
Translates to: YTSLPPRKQPIAASNSRNPNRHK*RPMASR
Trigger: TCTAGAGGCCATAGGTCTCAATTTGTGCCTATTTGG...GTTTCTGGAGTTGGAGGCAGCTATTGGTTGCTTTCTTGGAGGTAAGGAGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR-3UTR CAA 90 bp AATAAGTCAAAAGCAGGATCAGCCCAAATGTTAATGAAGAGCCTCTGCAGGCAGATTTGTGGTCTCCAATaGCTCCTGAGGAAGGATCAG +
Preference number: 3 (lower is better)
Translates to: NKSKAGSAQMLMKSLCRQICGLQ*LLRKDQ
Trigger: CTGATCCTTCCTCAGGAGCAATTGGAGACCACAAAT...CTGCCTGCAGAGGCTCTTCATTAACATTTGGGCTGATCCTGCTTTTGACTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp GTACTACGGCTCCCAAATAAATGCTGTAGATGCAAATaGCAAAGAAGAGCACTACACAGTTCAACAAGACTC +
Preference number: 3 (lower is better)
Translates to: VLRLPNKCCRCK*QRRALHSSTRL
Trigger: GAGTCTTGTTGAACTGTGTAGTGCTCTTCTTTGCCATTTGCATCTACAGCATTTATTTGGGAGCCGTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp TTTCCACTGCATGATGTTGTCAAGGACAAAAGGACTTaGCTGACTTCAAAACTGGGCCATTATGGGAATAAG +
Preference number: 3 (lower is better)
Translates to: FPLHDVVKDKRT*LTSKLGHYGNK
Trigger: CTTATTCCCATAATGGCCCAGTTTTGAAGTCAGCCAAGTCCTTTTGTCCTTGACAACATCATGCAGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CCA 72 bp GGTTACACAGCTCATAATGGAAAGAGCCAAAAATTTTaGTGTTCAGACTCTCAAATCAGATATCTTTCTAGT +
Preference number: 3 (lower is better)
Translates to: GYTAHNGKSQKF*CSDSQIRYLSS
Trigger: ACTAGAAAGATATCTGATTTGAGAGTCTGAACACCAAAATTTTTGGCTCTTTCCATTATGAGCTGTGTAACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CAA 72 bp AGCAGACTGCTTGAGCCCAGGAGTGTTGATACCAGCTaGAGCAACATGGCGAAACTCCATCTCTACCTAAAG +
Preference number: 4 (lower is better)
Translates to: SRLLEPRSVDTS*SNMAKLHLYLK
Trigger: CTTTAGGTAGAGATGGAGTTTCGCCATGTTGCTCAAGCTGGTATCAACACTCCTGGGCTCAAGCAGTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CAA 72 bp CTCACTTCTGATCTTTGGCTCATGAACTTGGAGAGGTaGAGAACTAGAATCTTTAAGCAGGAGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LTSDLWLMNLER*RTRIFKQEERP
Trigger: GGGCCTCTCCTCCTGCTTAAAGATTCTAGTTCTCAACCTCTCCAAGTTCATGAGCCAAAGATCAGAAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CAA 72 bp TTCTCTCTGCATTCTAGGAGAACTAAGGCTCTGAGGTaGCTTCATGGTCACCAAAGGACACTGGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: FSLHSRRTKALR*LHGHQRTLAFC
Trigger: GCAAAAAGCCAGTGTCCTTTGGTGACCATGAAGCAACCTCAGAGCCTTAGTTCTCCTAGAATGCAGAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CAA 72 bp GTCAGAAGACTCACTTCTGATCTTTGGCTCATGAACTaGGAGAGGTTGAGAACTAGAATCTTTAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VRRLTSDLWLMN*ERLRTRIFKQE
Trigger: CTCCTGCTTAAAGATTCTAGTTCTCAACCTCTCCAAGTTCATGAGCCAAAGATCAGAAGTGAGTCTTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CAA 72 bp AGAGCAGGAATTAGTGACATGAGAACAGAGGGTACTTaGCCAAGCCAACTGAACAGAGAAGGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: RAGISDMRTEGT*PSQLNREGDSK
Trigger: TTTTGAATCTCCTTCTCTGTTCAGTTGGCTTGGCAAAGTACCCTCTGTTCTCATGTCACTAATTCCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
3UTR CAA 72 bp AAAGCCAAGCTTTTAACAGGTATTTCTGCTTTAAATTaGTGGTCTCCAATTGCTCCTGAGGAAGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: KAKLLTGISALN*WSPIAPEEGSG
Trigger: ACCTGATCCTTCCTCAGGAGCAATTGGAGACCACAAATTTAAAGCAGAAATACCTGTTAAAAGCTTGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299550.10
ENST00000402157.6
ENST00000646038.1
CDS GCA 90 bp GCTGGGTTTCCAGCCAGGGCTGCAGCAGCTTTGGTGGATGAGGGCTaGAGGCCAGCTCTTTCTCCCTGGGCAGCAGGGCAGAGCACTGCA +
Preference number: 5 (lower is better)
Translates to: AGFPARAAAALVDEG*RPALSPWAAGQSTA
Trigger: TGCAGTGCTCTGCCCTGCTGCCCAGGGAGAAAGAGCTGGCCTGCAGCCCTCATCCACCAAAGCTGCTGCAGCCCTGGCTGGAAACCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 90 bp GGCCCCCGGGGACAGGGCTGTGTCGGTGTTCCTCTGTGCAAGAGCTaGACAGCCAGCGATTGCAGTAGGTGCAGAGGATATGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GPRGQGCVGVPLCKS*TASDCSRCRGYVLP
Trigger: GGGCAGCACATATCCTCTGCACCTACTGCAATCGCTGGCTGTGCAGCTCTTGCACAGAGGAACACCGACACAGCCCTGTCCCCGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS GCA 90 bp GGCAGTAACTCTTTACCATATGTCGTCGCCGCCTCTTGGGTTGGATaGCCTCCTGCATGTAGGGAGGCCACGGGAAGCCCTGGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: GSNSLPYVVAASWVG*PPACREATGSPGEW
Trigger: CCACTCCCCAGGGCTTCCCGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGTAAAGAGTTACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525788.1
CDS TCA 90 bp CATGCCTGTGCCCAGGACTGGGGCTTTTCCACTGATATCCTCAGGTaGGAAGCAGCGTGTAGAGCGAGCCAGCTCCACTCCCTGGGACCA +
Preference number: 5 (lower is better)
Translates to: HACAQDWGFSTDILR*EAACRASQLHSLGP
Trigger: TGGTCCCAGGGAGTGGAGCTGGCTCGCTCTACACGCTGCTTCTCACCTGAGGATATCAGTGGAAAAGCCCCAGTCCTGGGCACAGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS GCA 90 bp TTGCTCTTTCATTCTCCATATGTCGTCGCCGCCTCTTGGGTTGGATaGCCTCCTGCATGTAGGGAGGCCACGGGAAGCCCTGGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: LLFHSPYVVAASWVG*PPACREATGSPGEW
Trigger: CCACTCCCCAGGGCTTCCCGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGAGAATGAAAGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529211.1
ENST00000646038.2
CDS CCA 90 bp CTGCTGGCTGGCAGTAACTCTTTACCATATGTCGTCGCCGCCTCTTaGGTTGGATGCCCTCCTGCATGTAGGGAGGCCACGGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: LLAGSNSLPYVVAAS*VGCPPACREATGSP
Trigger: AGGGCTTCCCGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGTAAAGAGTTACTGCCAGCCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525788.1
CDS TCA 90 bp ATTCTCCAGGGAGGGATCAGCCCCATCTCTGGGACACAGGCTCCCTaGAGTTCGGCCAGAACTGGAGCTGGACCCAGTTTCTGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: ILQGGISPISGTQAP*SSARTGAGPSFWLH
Trigger: ATGCAGCCAGAAACTGGGTCCAGCTCCAGTTCTGGCCGAACTTCAGGGAGCCTGTGTCCCAGAGATGGGGCTGATCCCTCCCTGGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 90 bp GAAAGAATGGGCCCCCGGGGACAGGGCTGTGTCGGTGTTCCTCTGTaGAAGAGCTGCACAGCCAGCGATTGCAGTAGGTGCAGAGGATAT +
Preference number: 5 (lower is better)
Translates to: ERMGPRGQGCVGVPL*KSCTASDCSRCRGY
Trigger: ATATCCTCTGCACCTACTGCAATCGCTGGCTGTGCAGCTCTTGCACAGAGGAACACCGACACAGCCCTGTCCCCGGGGGCCCATTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS CCA 90 bp CAGCCCCATCTCTGGGACACAGGCTCCCTGAAGTTCGGCCAGAACTaGAGCTGGACCCAGTTTCTGGCTGCATGTCAGAAACTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: QPHLWDTGSLKFGQN*SWTQFLAACQKLEG
Trigger: TCCCTCCAGTTTCTGACATGCAGCCAGAAACTGGGTCCAGCTCCAGTTCTGGCCGAACTTCAGGGAGCCTGTGTCCCAGAGATGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 90 bp CCATCTTACACAGAGCATTCTCCAGGGAGGGATCAGCCCCATCTCTaGGACACAGGCTCCCTGAAGTTCGGCCAGAACTGGAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: PSYTEHSPGRDQPHL*DTGSLKFGQNWSWT
Trigger: GGTCCAGCTCCAGTTCTGGCCGAACTTCAGGGAGCCTGTGTCCCAGAGATGGGGCTGATCCCTCCCTGGAGAATGCTCTGTGTAAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402157.7
ENST00000646038.2
CDS TCA 90 bp CTGGGGAGTGGAACATCCACTCTCACTAGACACCTCCTCGGAGTCTaGGTCCTCCTGCCTTGGCTGGGCAAACCGTTTCTCCGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: LGSGTSTLTRHLLGV*VLLPWLGKPFLRVD
Trigger: ATCTACCCGGAGAAACGGTTTGCCCAGCCAAGGCAGGAGGACTCAGACTCCGAGGAGGTGTCTAGTGAGAGTGGATGTTCCACTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000529211.1
ENST00000646038.2
CDS TCA 90 bp CAGCCTCTGCAACCTCGGAGTCAGGCTGATGGGGGAGGAGAGCAGTaGTGGTCTAGCCTGTTTCTACCAGTCCATCTCTTTCGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: QPLQPRSQADGGGEQ*WSSLFLPVHLFRVP
Trigger: AGGGACCCGAAAGAGATGGACTGGTAGAAACAGGCTAGACCATCACTGCTCTCCTCCCCCATCAGCCTGACTCCGAGGTTGCAGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529211.1
CDS TCA 90 bp TGGACTGAAGTGTTCGAAACCGTACACCGCCACCAGGACACTCCGTaGTGGGGGATCACCACCCTCAGAAAGAGGAAGCGACTAGCAGGC +
Preference number: 5 (lower is better)
Translates to: WTEVFETVHRHQDTP*WGITTLRKRKRLAG
Trigger: GCCTGCTAGTCGCTTCCTCTTTCTGAGGGTGGTGATCCCCCATCACGGAGTGTCCTGGTGGCGGTGTACGGTTTCGAACACTTCAGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644261.1
CDS GCA 90 bp TGGAGCTGGACCCAGTTTCTGGCTGCATGTCAGAAACTGGAGGGATaGTCTGCAGAGGACAAGTTGCCAGACTCGGCACAGCCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: WSWTQFLAACQKLEG*SAEDKLPDSAQPGC
Trigger: ACACCCAGGCTGTGCCGAGTCTGGCAACTTGTCCTCTGCAGAGCATCCCTCCAGTTTCTGACATGCAGCCAGAAACTGGGTCCAGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 90 bp TTACCTTACACAGAGCATTCTCCAGGGAGGGATCAGCCCCATCTCTaGGACACAGGCTCCCTGAAGTTCGGCCAGAACTGGAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: LPYTEHSPGRDQPHL*DTGSLKFGQNWSWT
Trigger: GGTCCAGCTCCAGTTCTGGCCGAACTTCAGGGAGCCTGTGTCCCAGAGATGGGGCTGATCCCTCCCTGGAGAATGCTCTGTGTAAGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481014.6
CDS GCA 90 bp GGCTGTGTCGGTGTTCCTCTGTGCAAGAGCTGCACAGCCAGCGATTaGAGTAGGTGCAGAGGATATGTGCTGCCCTCTTCTCCTTGCACT +
Preference number: 5 (lower is better)
Translates to: GCVGVPLCKSCTASD*SRCRGYVLPSSPCT
Trigger: AGTGCAAGGAGAAGAGGGCAGCACATATCCTCTGCACCTACTGCAATCGCTGGCTGTGCAGCTCTTGCACAGAGGAACACCGACACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS GCA 90 bp CTCCCTGAAGTTCGGCCAGAACTGGAGCTGGACCCAGTTTCTGGCTaGATGTCAGAAACTGGAGGGATGCTCTGCAGAGGACAAGTTGCC +
Preference number: 5 (lower is better)
Translates to: LPEVRPELELDPVSG*MSETGGMLCRGQVA
Trigger: GGCAACTTGTCCTCTGCAGAGCATCCCTCCAGTTTCTGACATGCAGCCAGAAACTGGGTCCAGCTCCAGTTCTGGCCGAACTTCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 90 bp CAAGGCTGGGCACAGTCTGTAGGTGACTGGTTGTCAGGCTGGGCATaGCCTGGTTTTGAACACTTGTCAGGCTGGACACCATTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: QGWAQSVGDWLSGWA*PGFEHLSGWTPFWG
Trigger: CCCCCAAAATGGTGTCCAGCCTGACAAGTGTTCAAAACCAGGCCATGCCCAGCCTGACAACCAGTCACCTACAGACTGTGCCCAGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 90 bp CATCTCTGGGACACAGGCTCCCTGAAGTTCGGCCAGAACTGGAGCTaGACCCAGTTTCTGGCTGCATGTCAGAAACTGGAGGGATGCTCT +
Preference number: 5 (lower is better)
Translates to: HLWDTGSLKFGQNWS*TQFLAACQKLEGCS
Trigger: AGAGCATCCCTCCAGTTTCTGACATGCAGCCAGAAACTGGGTCCAGCTCCAGTTCTGGCCGAACTTCAGGGAGCCTGTGTCCCAGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS TCA 90 bp CCTGGCTCTGGGACTGGACAGGTGCTGGCTGCCTCACGATGTAGTTaGTCTGCCCCACAATGGTTTGCTGAAGATGCTGAGGAGATTTGG +
Preference number: 5 (lower is better)
Translates to: PGSGTGQVLAASRCS*SAPQWFAEDAEEIW
Trigger: CCAAATCTCCTCAGCATCTTCAGCAAACCATTGTGGGGCAGATCAACTACATCGTGAGGCAGCCAGCACCTGTCCAGTCCCAGAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 90 bp GGTGTTCCTCTGTGCAAGAGCTGCACAGCCAGCGATTGCAGTAGGTaGAGAGGATATGTGCTGCCCTCTTCTCCTTGCACTCAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: GVPLCKSCTASDCSR*RGYVLPSSPCTQSS
Trigger: ACTGCTCTGAGTGCAAGGAGAAGAGGGCAGCACATATCCTCTGCACCTACTGCAATCGCTGGCTGTGCAGCTCTTGCACAGAGGAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS CCA 90 bp CACTTATCAGGTTGGGCATGGACTGGAATGTGCTATGCACAAGGCTaGGCACAGTCTGTAGGTGACTGGTTGTCAGGCTGGGCATGGCCT +
Preference number: 5 (lower is better)
Translates to: HLSGWAWTGMCYAQG*AQSVGDWLSGWAWP
Trigger: AGGCCATGCCCAGCCTGACAACCAGTCACCTACAGACTGTGCCCAGCCTTGTGCATAGCACATTCCAGTCCATGCCCAACCTGATAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 90 bp ACTGGAATGTGCTATGCACAAGGCTGGGCACAGTCTGTAGGTGACTaGTTGTCAGGCTGGGCATGGCCTGGTTTTGAACACTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: TGMCYAQGWAQSVGD*LSGWAWPGFEHLSG
Trigger: GCCTGACAAGTGTTCAAAACCAGGCCATGCCCAGCCTGACAACCAGTCACCTACAGACTGTGCCCAGCCTTGTGCATAGCACATTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 90 bp AGCCAGCTCCACTCCCTGGGACCAAAAAGAGAGTCTAGCCATCTCTaGCGTGGAAAACAAAGCGTGGAGGTGTCTGCTGTTTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: SQLHSLGPKRESSHL*RGKQSVEVSAVCLK
Trigger: CTTCAGACAAACAGCAGACACCTCCACGCTTTGTTTTCCACGGCAGAGATGGCTAGACTCTCTTTTTGGTCCCAGGGAGTGGAGCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS CCA 90 bp AGAATCTCAGCTAGGCTGTGGCATCTGCAACAGTCTCATGAGCCTTaGCAATCTGCCCTAGCTCCTGTATCAAGCCCTGGAAGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: RISARLWHLQQSHEP*QSALAPVSSPGSSP
Trigger: AGGACTGCTTCCAGGGCTTGATACAGGAGCTAGGGCAGATTGCCAAGGCTCATGAGACTGTTGCAGATGCCACAGCCTAGCTGAGATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402157.7
ENST00000531498.5
CDS CCA 90 bp TATGCACAAGGCTGGGCACAGTCTGTAGGTGACTGGTTGTCAGGCTaGGCATGGCCTGGTTTTGAACACTTGTCAGGCTGGACACCATTT +
Preference number: 5 (lower is better)
Translates to: YAQGWAQSVGDWLSG*AWPGFEHLSGWTPF
Trigger: AAATGGTGTCCAGCCTGACAAGTGTTCAAAACCAGGCCATGCCCAGCCTGACAACCAGTCACCTACAGACTGTGCCCAGCCTTGTGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 90 bp TTTTGGGTTCTGGTACTGCTGCAGAGCTGTAGACGTGCTGACCACTaGCGCCAGTGGAGGTTTCTTCACAGAGAGGTTAATTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: FWVLVLLQSCRRADH*RQWRFLHREVNWLL
Trigger: GAGGAGCCAATTAACCTCTCTGTGAAGAAACCTCCACTGGCGCCAGTGGTCAGCACGTCTACAGCTCTGCAGCAGTACCAGAACCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 90 bp TCTGAAGAGGATAAGCTGCAAGATGGGGAGGAATGGTCGACAGTATaGGACAACAGCTGCCAGAGTGCCCAGTCTCCTTTTGGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: SEEDKLQDGEEWSTV*DNSCQSAQSPFGSH
Trigger: GTGAGAGCCAAAAGGAGACTGGGCACTCTGGCAGCTGTTGTCCCATACTGTCGACCATTCCTCCCCATCTTGCAGCTTATCCTCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000529211.1
ENST00000646038.2
CDS TCA 90 bp CTGATCATTCTTCTGTGGCTTCAGTTTGAACACAGGCATCTCTCCTaGGGAGGCAGCACAGATCTTGAGTCGCTCCAGTCGCACATAGGG +
Preference number: 5 (lower is better)
Translates to: LIILLWLQFEHRHLS*GGSTDLESLQSHIG
Trigger: CCCTATGTGCGACTGGAGCGACTCAAGATCTGTGCTGCCTCCTCAGGAGAGATGCCTGTGTTCAAACTGAAGCCACAGAAGAATGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000530502.1
ENST00000646038.2
CDS TCA 90 bp GAGCATCCAGACCGGGGACTATGGGACCTTGTCCCAGTAAGTCAGTaGAGCGAGTGGAATCCTCACTTTCCATCTTACACAGAGCATTCT +
Preference number: 5 (lower is better)
Translates to: EHPDRGLWDLVPVSQ*SEWNPHFPSYTEHS
Trigger: AGAATGCTCTGTGTAAGATGGAAAGTGAGGATTCCACTCGCTTCACTGACTTACTGGGACAAGGTCCCATAGTCCCCGGTCTGGATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402157.7
ENST00000646038.2
CDS TCA 90 bp GGTATAGTGAGCTGGGTCCTTCTTTTGCAGCTTCCTCCGGATGATTaGCAGGTCCATGGGCCTCTTGATAATCTGGTAATAATGCCGGGC +
Preference number: 5 (lower is better)
Translates to: GIVSWVLLLQLPPDD*QVHGPLDNLVIMPG
Trigger: GCCCGGCATTATTACCAGATTATCAAGAGGCCCATGGACCTGTCAATCATCCGGAGGAAGCTGCAAAAGAAGGACCCAGCTCACTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000530502.1
ENST00000646038.2
CDS TCA 90 bp ATCTCTGCCGTGGAAAACAAAGCGTGGAGGTGTCTGCTGTTTGTCTaGAGGCGAACAAACCCTTCAAAAGTGTCCCGTACCTGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: ISAVENKAWRCLLFV*RRTNPSKVSRTCAS
Trigger: AGAGGCACAGGTACGGGACACTTTTGAAGGGTTTGTTCGCCTTCAGACAAACAGCAGACACCTCCACGCTTTGTTTTCCACGGCAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS CCA 90 bp TTTGCTGAAGATGCTGAGGAGATTTGGTCTGACTCAGTTGCAGGCTaGGCTGTTGAGCCTGGAGAAGAAGCTCCAAGTCCTTCTGCATTT +
Preference number: 5 (lower is better)
Translates to: FAEDAEEIWSDSVAG*AVEPGEEAPSPSAF
Trigger: AAATGCAGAAGGACTTGGAGCTTCTTCTCCAGGCTCAACAGCCCAGCCTGCAACTGAGTCAGACCAAATCTCCTCAGCATCTTCAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS TCA 90 bp AGGATAATTGAACTTAGCACAGTTCCAGAACATGAGGCGCACATCTaGTACCACCTCCTCTGGGGTGGTATAGTGAGCTGGGTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: RIIELSTVPEHEAHI*YHLLWGGIVSWVLL
Trigger: AAGAAGGACCCAGCTCACTATACCACCCCAGAGGAGGTGGTATCAGATGTGCGCCTCATGTTCTGGAACTGTGCTAAGTTCAATTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000530502.1
ENST00000646038.2
CDS TCA 90 bp GAGCATCCAGACCGGGGACTATGGGACCTTGTCCCAGTAAGTCAGTaGAGCGAGTGGAATCCTCACTTTCCATCTTTCAAAAGTGAAATG +
Preference number: 5 (lower is better)
Translates to: EHPDRGLWDLVPVSQ*SEWNPHFPSFKSEM
Trigger: CATTTCACTTTTGAAAGATGGAAAGTGAGGATTCCACTCGCTTCACTGACTTACTGGGACAAGGTCCCATAGTCCCCGGTCTGGATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481014.6
CDS TCA 90 bp TTGCTGCAGACAGCCCAGTTGATGAAATTCTGCACATGCTCAAACTaGCGGTTGAGAACCATGATGCTCTGTAACTGCTGTTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLQTAQLMKFCTCSN*RLRTMMLCNCCSSF
Trigger: GAAGCTGGAACAGCAGTTACAGAGCATCATGGTTCTCAACCGTCAGTTTGAGCATGTGCAGAATTTCATCAACTGGGCTGTCTGCAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529057.1
ENST00000531498.5
ENST00000646038.2
CDS GCA 90 bp GTTTGTCTGAAGGCGAACAAACCCTTCAAAAGTGTCCCGTACCTGTaGCTCTCCTTATTGGTAGACAAGCTTGACCTGTTTCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: VCLKANKPFKSVPYL*LSLLVDKLDLFLQS
Trigger: TGACTGCAGAAACAGGTCAAGCTTGTCTACCAATAAGGAGAGGCACAGGTACGGGACACTTTTGAAGGGTTTGTTCGCCTTCAGACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS GCA 90 bp TGTGCCACCTGTGTAGTCACACCTTCCAGAAGCATCCTCTGGTTTTaGAAAACTTCTTCAACATGTCTGCACCTGTGTTCTTTGTGTTCC +
Preference number: 5 (lower is better)
Translates to: CATCVVTPSRSILWF*KTSSTCLHLCSLCS
Trigger: GGAACACAAAGAACACAGGTGCAGACATGTTGAAGAAGTTTTGCAAAACCAGAGGATGCTTCTGGAAGGTGTGACTACACAGGTGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS GCA 90 bp TGTGCCACCTGTGTAGTCACACCTTCCAGAAGCATCCTCTGGTTTTaGAAAACTTCTTCAACATGTCTGTGTTCTTTGTGTTCCACCACT +
Preference number: 5 (lower is better)
Translates to: CATCVVTPSRSILWF*KTSSTCLCSLCSTT
Trigger: AGTGGTGGAACACAAAGAACACAGACATGTTGAAGAAGTTTTGCAAAACCAGAGGATGCTTCTGGAAGGTGTGACTACACAGGTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402157.7
CDS TCA 90 bp TTCCAGGTAACCCAGCTCATTTCTTGTGCACTTACTGGCCAGTTTTaGTGTCAAATAGACGACGATGTCTTCTTTGATCTCCCCTCCTAT +
Preference number: 5 (lower is better)
Translates to: FQVTQLISCALTGQF*CQIDDDVFFDLPSY
Trigger: ATAGGAGGGGAGATCAAAGAAGACATCGTCGTCTATTTGACATCAAAACTGGCCAGTAAGTGCACAAGAAATGAGCTGGGTTACCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS CCA 90 bp TTCTTATGTGCCACCTGTGTAGTCACACCTTCCAGAAGCATCCTCTaGTTTTGCAAAACTTCTTCAACATGTCTGCACCTGTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: FLCATCVVTPSRSIL*FCKTSSTCLHLCSL
Trigger: CAAAGAACACAGGTGCAGACATGTTGAAGAAGTTTTGCAAAACCAGAGGATGCTTCTGGAAGGTGTGACTACACAGGTGGCACATAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS TCA 90 bp TGGCCTGTTTGTTCAGCTCATTCATCAGAACCATCTTGGCCATTTTaGTCTGGTTTTCCACCTTCCTATGCTGATGCTTCACTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: WPVCSAHSSEPSWPF*SGFPPSYADASLQK
Trigger: TTTTTGAAGTGAAGCATCAGCATAGGAAGGTGGAAAACCAGATCAAAATGGCCAAGATGGTTCTGATGAATGAGCTGAACAAACAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529057.1
ENST00000531498.5
ENST00000646038.2
CDS TCA 90 bp TGCTGTACCTTCAGGCAGATGTATTTTGTAAATTGCCAAGTGCTCTaGAAATGTTGGTTGTTATCCTTGTGGACTGAAGTGTTCGAAACC +
Preference number: 5 (lower is better)
Translates to: CCTFRQMYFVNCQVL*KCWLLSLWTEVFET
Trigger: GGTTTCGAACACTTCAGTCCACAAGGATAACAACCAACATTTTCAGAGCACTTGGCAATTTACAAAATACATCTGCCTGAAGGTACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS TCA 90 bp AAGTCAGTGAAGCGAGTGGAATCCTCACTTTCCATCTTTCAAAAGTaGAATGTCGACAAGAATCAAAGAACTCAGACATGGTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: KSVKRVESSLSIFQK*NVDKNQRTQTWLSL
Trigger: TAATGACAACCATGTCTGAGTTCTTTGATTCTTGTCGACATTTCACTTTTGAAAGATGGAAAGTGAGGATTCCACTCGCTTCACTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481014.6
CDS TCA 90 bp TGTTTCTGCAGTCAATCTGTTATATGTTGTTTTGTTCACAGTATATaGGGAAAATCCAGTCTCACACAGACATACAGCTCCATTGACAGA +
Preference number: 5 (lower is better)
Translates to: CFCSQSVICCFVHSI*GKSSLTQTYSSIDR
Trigger: TCTGTCAATGGAGCTGTATGTCTGTGTGAGACTGGATTTTCCTCATATACTGTGAACAAAACAACATATAACAGATTGACTGCAGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646038.2
CDS GCA 72 bp CCAGCCAGGGCTGCAGCAGCTTTGGTGGATGAGGGCTaGAGGCCAGCTCTTTCTCCCTGGGCAGCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: PARAAAALVDEG*RPALSPWAAGQ
Trigger: CTGCCCTGCTGCCCAGGGAGAAAGAGCTGGCCTGCAGCCCTCATCCACCAAAGCTGCTGCAGCCCTGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 72 bp GGCCCCCGGGGACAGGGCTGTGTCGGTGTTCCTCTGTaGAAGAGCTGCACAGCCAGCGATTGCAGTAGGTGC +
Preference number: 6 (lower is better)
Translates to: GPRGQGCVGVPL*KSCTASDCSRC
Trigger: GCACCTACTGCAATCGCTGGCTGTGCAGCTCTTGCACAGAGGAACACCGACACAGCCCTGTCCCCGGGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS GCA 72 bp TCTCACAGTCGTACTCCATCTCGGGCTGGGTCAGGCTaGGGCACAAGGTACACACCCACTCTCCCCCTGGGA +
Preference number: 6 (lower is better)
Translates to: SHSRTPSRAGSG*GTRYTPTLPLG
Trigger: TCCCAGGGGGAGAGTGGGTGTGTACCTTGTGCCGCAGCCTGACCCAGCCCGAGATGGAGTACGACTGTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000530502.1
ENST00000646038.2
CDS CAA 90 bp TGGCTGGCAGTAACTCTTTACCATATGTCGTCGCCGCCTCTTGGGTaGGATGCCCTCCTGCATGTAGGGAGGCCACGGGAAGCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: WLAVTLYHMSSPPLG*DALLHVGRPREALG
Trigger: CCCCAGGGCTTCCCGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGTAAAGAGTTACTGCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525788.1
CDS TCA 72 bp GGAGGGATCAGCCCCATCTCTGGGACACAGGCTCCCTaGAGTTCGGCCAGAACTGGAGCTGGACCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: GGISPISGTQAP*SSARTGAGPSF
Trigger: GAAACTGGGTCCAGCTCCAGTTCTGGCCGAACTTCAGGGAGCCTGTGTCCCAGAGATGGGGCTGATCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 72 bp CATTCTCCATATGTCGTCGCCGCCTCTTGGGTTGGATaGCCTCCTGCATGTAGGGAGGCCACGGGAAGCCCT +
Preference number: 6 (lower is better)
Translates to: HSPYVVAASWVG*PPACREATGSP
Trigger: AGGGCTTCCCGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGAGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529211.1
ENST00000646038.2
CDS GCA 72 bp TCTTTACCATATGTCGTCGCCGCCTCTTGGGTTGGATaGCCTCCTGCATGTAGGGAGGCCACGGGAAGCCCT +
Preference number: 6 (lower is better)
Translates to: SLPYVVAASWVG*PPACREATGSP
Trigger: AGGGCTTCCCGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGTAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525788.1
CDS CCA 72 bp ACAGAGCATTCTCCAGGGAGGGATCAGCCCCATCTCTaGGACACAGGCTCCCTGAAGTTCGGCCAGAACTGG +
Preference number: 6 (lower is better)
Translates to: TEHSPGRDQPHL*DTGSLKFGQNW
Trigger: CCAGTTCTGGCCGAACTTCAGGGAGCCTGTGTCCCAGAGATGGGGCTGATCCCTCCCTGGAGAATGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CAA 72 bp AGCAAGGCTGGCACATGGCAGGAGAGGTGGAACACTTaGGGGCAGCGGTCACAGCACAGTAACTCTCCGCCA +
Preference number: 6 (lower is better)
Translates to: SKAGTWQERWNT*GQRSQHSNSPP
Trigger: TGGCGGAGAGTTACTGTGCTGTGACCGCTGCCCCAAAGTGTTCCACCTCTCCTGCCATGTGCCAGCCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000530502.1
ENST00000646038.2
CDS CAA 90 bp GGGAAGCTGAGCAAGGCTGGCACATGGCAGGAGAGGTGGAACACTTaGGGGCAGCGGTCACAGCACAGTAACTCTCCGCCATTGAGGCAA +
Preference number: 6 (lower is better)
Translates to: GKLSKAGTWQERWNT*GQRSQHSNSPPLRQ
Trigger: TTGCCTCAATGGCGGAGAGTTACTGTGCTGTGACCGCTGCCCCAAAGTGTTCCACCTCTCCTGCCATGTGCCAGCCTTGCTCAGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000530502.1
ENST00000646038.2
CDS CAA 90 bp CTGGCTGCATGTCAGAAACTGGAGGGATGCTCTGCAGAGGACAAGTaGCCAGACTCGGCACAGCCTGGGTGTGACCAGACATTAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LAACQKLEGCSAEDK*PDSAQPGCDQTLGW
Trigger: CCAGCCTAATGTCTGGTCACACCCAGGCTGTGCCGAGTCTGGCAACTTGTCCTCTGCAGAGCATCCCTCCAGTTTCTGACATGCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CAA 90 bp TCTTTTTGCTCTTTCATTCTCCATATGTCGTCGCCGCCTCTTGGGTaGGATGCCCTCCTGCATGTAGGGAGGCCACGGGAAGCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: SFCSFILHMSSPPLG*DALLHVGRPREALG
Trigger: CCCCAGGGCTTCCCGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGAGAATGAAAGAGCAAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529211.1
ENST00000646038.2
CDS TCA 72 bp GTGTTCGAAACCGTACACCGCCACCAGGACACTCCGTaGTGGGGGATCACCACCCTCAGAAAGAGGAAGCGA +
Preference number: 6 (lower is better)
Translates to: VFETVHRHQDTP*WGITTLRKRKR
Trigger: TCGCTTCCTCTTTCTGAGGGTGGTGATCCCCCATCACGGAGTGTCCTGGTGGCGGTGTACGGTTTCGAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644261.1
CDS CCA 72 bp GATGCTCAGCGAGGTGGAGTGCTTTCTCACCACATTTaGAGAGGAGTGCTGGATGGTGCTGTCCACTGGGGG +
Preference number: 6 (lower is better)
Translates to: DAQRGGVLSHHI*RGVLDGAVHWG
Trigger: CCCCCAGTGGACAGCACCATCCAGCACTCCTCTCCAAATGTGGTGAGAAAGCACTCCACCTCGCTGAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 72 bp GGCTGGGCACAGTCTGTAGGTGACTGGTTGTCAGGCTaGGCATGGCCTGGTTTTGAACACTTGTCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: GWAQSVGDWLSG*AWPGFEHLSGW
Trigger: CCAGCCTGACAAGTGTTCAAAACCAGGCCATGCCCAGCCTGACAACCAGTCACCTACAGACTGTGCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 72 bp GGCAGTAACTCTTTACCATATGTCGTCGCCGCCTCTTaGGTTGGATGCCCTCCTGCATGTAGGGAGGCCACG +
Preference number: 6 (lower is better)
Translates to: GSNSLPYVVAAS*VGCPPACREAT
Trigger: CGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGTAAAGAGTTACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525788.1
CDS TCA 72 bp GGAACATCCACTCTCACTAGACACCTCCTCGGAGTCTaGGTCCTCCTGCCTTGGCTGGGCAAACCGTTTCTC +
Preference number: 6 (lower is better)
Translates to: GTSTLTRHLLGV*VLLPWLGKPFL
Trigger: GAGAAACGGTTTGCCCAGCCAAGGCAGGAGGACTCAGACTCCGAGGAGGTGTCTAGTGAGAGTGGATGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000529211.1
ENST00000646038.2
CDS GCA 72 bp CAGCCAGCGATTGCAGTAGGTGCAGAGGATATGTGCTaGCCTCTTCTCCTTGCACTCAGAGCAGTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: QPAIAVGAEDMC*PLLLALRAVPG
Trigger: GCCAGGAACTGCTCTGAGTGCAAGGAGAAGAGGGCAGCACATATCCTCTGCACCTACTGCAATCGCTGGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS GCA 72 bp GGACAGGGCTGTGTCGGTGTTCCTCTGTGCAAGAGCTaGACAGCCAGCGATTGCAGTAGGTGCAGAGGATAT +
Preference number: 6 (lower is better)
Translates to: GQGCVGVPLCKS*TASDCSRCRGY
Trigger: ATATCCTCTGCACCTACTGCAATCGCTGGCTGTGCAGCTCTTGCACAGAGGAACACCGACACAGCCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS GCA 72 bp GTTTCTGGCTGCATGTCAGAAACTGGAGGGATGCTCTaGAGAGGACAAGTTGCCAGACTCGGCACAGCCTGG +
Preference number: 6 (lower is better)
Translates to: VSGCMSETGGML*RGQVARLGTAW
Trigger: CCAGGCTGTGCCGAGTCTGGCAACTTGTCCTCTGCAGAGCATCCCTCCAGTTTCTGACATGCAGCCAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 72 bp GTTCGGCCAGAACTGGAGCTGGACCCAGTTTCTGGCTaGATGTCAGAAACTGGAGGGATGCTCTGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: VRPELELDPVSG*MSETGGMLCRG
Trigger: TCCTCTGCAGAGCATCCCTCCAGTTTCTGACATGCAGCCAGAAACTGGGTCCAGCTCCAGTTCTGGCCGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 72 bp GATGGGGAGGAATGGTCGACAGTATGGGACAACAGCTaGCAGAGTGCCCAGTCTCCTTTTGGCTCTCACACC +
Preference number: 6 (lower is better)
Translates to: DGEEWSTVWDNS*QSAQSPFGSHT
Trigger: GGTGTGAGAGCCAAAAGGAGACTGGGCACTCTGGCAGCTGTTGTCCCATACTGTCGACCATTCCTCCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000529211.1
ENST00000646038.2
CDS CCA 72 bp GACACAGGCTCCCTGAAGTTCGGCCAGAACTGGAGCTaGACCCAGTTTCTGGCTGCATGTCAGAAACTGGAG +
Preference number: 6 (lower is better)
Translates to: DTGSLKFGQNWS*TQFLAACQKLE
Trigger: CTCCAGTTTCTGACATGCAGCCAGAAACTGGGTCCAGCTCCAGTTCTGGCCGAACTTCAGGGAGCCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 72 bp CTCTGGGACACAGGCTCCCTGAAGTTCGGCCAGAACTaGAGCTGGACCCAGTTTCTGGCTGCATGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: LWDTGSLKFGQN*SWTQFLAACQK
Trigger: TTTCTGACATGCAGCCAGAAACTGGGTCCAGCTCCAGTTCTGGCCGAACTTCAGGGAGCCTGTGTCCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 72 bp TTGCTCTTTCATTCTCCATATGTCGTCGCCGCCTCTTaGGTTGGATGCCCTCCTGCATGTAGGGAGGCCACG +
Preference number: 6 (lower is better)
Translates to: LLFHSPYVVAAS*VGCPPACREAT
Trigger: CGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGAGAATGAAAGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529211.1
ENST00000646038.2
CDS CAA 72 bp TGTCAGAAACTGGAGGGATGCTCTGCAGAGGACAAGTaGCCAGACTCGGCACAGCCTGGGTGTGACCAGACA +
Preference number: 6 (lower is better)
Translates to: CQKLEGCSAEDK*PDSAQPGCDQT
Trigger: TGTCTGGTCACACCCAGGCTGTGCCGAGTCTGGCAACTTGTCCTCTGCAGAGCATCCCTCCAGTTTCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CAA 72 bp TCTTTCATTCTCCATATGTCGTCGCCGCCTCTTGGGTaGGATGCCCTCCTGCATGTAGGGAGGCCACGGGAA +
Preference number: 6 (lower is better)
Translates to: SFILHMSSPPLG*DALLHVGRPRE
Trigger: TTCCCGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGAGAATGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529211.1
ENST00000646038.2
CDS CAA 72 bp TATGGGACAACAGCTGCCAGAGTGCCCAGTCTCCTTTaGGCTCTCACACCTGAGAGATGCTGTTGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: YGTTAARVPSLL*ALTPERCCWPG
Trigger: GCCTGGCCAACAGCATCTCTCAGGTGTGAGAGCCAAAAGGAGACTGGGCACTCTGGCAGCTGTTGTCCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000529211.1
ENST00000646038.2
CDS CAA 72 bp GTAACTCTTTACCATATGTCGTCGCCGCCTCTTGGGTaGGATGCCCTCCTGCATGTAGGGAGGCCACGGGAA +
Preference number: 6 (lower is better)
Translates to: VTLYHMSSPPLG*DALLHVGRPRE
Trigger: TTCCCGTGGCCTCCCTACATGCAGGAGGGCATCCAACCCAAGAGGCGGCGACGACATATGGTAAAGAGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525788.1
CDS CAA 90 bp GGTCGACAGTATGGGACAACAGCTGCCAGAGTGCCCAGTCTCCTTTaGGCTCTCACACCTGAGAGATGCTGTTGGCCAGGCGAAATGACA +
Preference number: 6 (lower is better)
Translates to: GRQYGTTAARVPSLL*ALTPERCCWPGEMT
Trigger: TGTCATTTCGCCTGGCCAACAGCATCTCTCAGGTGTGAGAGCCAAAAGGAGACTGGGCACTCTGGCAGCTGTTGTCCCATACTGTCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000529211.1
ENST00000646038.2
CDS TCA 72 bp GATCTTGCCCAGCTGGTCTCCTCAGTACCTGAGAGGTaGCGCAGACCCATCTTCCTAGTTGCTGGGGAGAAT +
Preference number: 6 (lower is better)
Translates to: DLAQLVSSVPER*RRPIFLVAGEN
Trigger: ATTCTCCCCAGCAACTAGGAAGATGGGTCTGCGTCACCTCTCAGGTACTGAGGAGACCAGCTGGGCAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402157.7
ENST00000531498.5
CDS TCA 72 bp GGGACTGGACAGGTGCTGGCTGCCTCACGATGTAGTTaGTCTGCCCCACAATGGTTTGCTGAAGATGCTGAG +
Preference number: 6 (lower is better)
Translates to: GTGQVLAASRCS*SAPQWFAEDAE
Trigger: CTCAGCATCTTCAGCAAACCATTGTGGGGCAGATCAACTACATCGTGAGGCAGCCAGCACCTGTCCAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 72 bp GCACAGCCAGCGATTGCAGTAGGTGCAGAGGATATGTaGTGCCCTCTTCTCCTTGCACTCAGAGCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: AQPAIAVGAEDM*CPLLLALRAVP
Trigger: AGGAACTGCTCTGAGTGCAAGGAGAAGAGGGCAGCACATATCCTCTGCACCTACTGCAATCGCTGGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS GCA 72 bp GGTGTTCCTCTGTGCAAGAGCTGCACAGCCAGCGATTaGAGTAGGTGCAGAGGATATGTGCTGCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: GVPLCKSCTASD*SRCRGYVLPSS
Trigger: AGAAGAGGGCAGCACATATCCTCTGCACCTACTGCAATCGCTGGCTGTGCAGCTCTTGCACAGAGGAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS GCA 72 bp ACCCAGTTTCTGGCTGCATGTCAGAAACTGGAGGGATaGTCTGCAGAGGACAAGTTGCCAGACTCGGCACAG +
Preference number: 6 (lower is better)
Translates to: TQFLAACQKLEG*SAEDKLPDSAQ
Trigger: CTGTGCCGAGTCTGGCAACTTGTCCTCTGCAGAGCATCCCTCCAGTTTCTGACATGCAGCCAGAAACTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 72 bp GCTAGGCTGTGGCATCTGCAACAGTCTCATGAGCCTTaGCAATCTGCCCTAGCTCCTGTATCAAGCCCTGGA +
Preference number: 6 (lower is better)
Translates to: ARLWHLQQSHEP*QSALAPVSSPG
Trigger: TCCAGGGCTTGATACAGGAGCTAGGGCAGATTGCCAAGGCTCATGAGACTGTTGCAGATGCCACAGCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402157.7
ENST00000531498.5
CDS CCA 72 bp GCACAGTCTGTAGGTGACTGGTTGTCAGGCTGGGCATaGCCTGGTTTTGAACACTTGTCAGGCTGGACACCA +
Preference number: 6 (lower is better)
Translates to: AQSVGDWLSGWA*PGFEHLSGWTP
Trigger: TGGTGTCCAGCCTGACAAGTGTTCAAAACCAGGCCATGCCCAGCCTGACAACCAGTCACCTACAGACTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 72 bp CTGCAGAGCTGTAGACGTGCTGACCACTGGCGCCAGTaGAGGTTTCTTCACAGAGAGGTTAATTGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: LQSCRRADHWRQ*RFLHREVNWLL
Trigger: GAGGAGCCAATTAACCTCTCTGTGAAGAAACCTCCACTGGCGCCAGTGGTCAGCACGTCTACAGCTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 72 bp TCTGTGTTCTTCAGGAGATGTGCCCTCCACTTCTGGTaGCCGCTGCCCAGCCAAAGAAGTGACAGTGACCTT +
Preference number: 6 (lower is better)
Translates to: SVFFRRCALHFW*PLPSQRSDSDL
Trigger: AAGGTCACTGTCACTTCTTTGGCTGGGCAGCGGCCACCAGAAGTGGAGGGCACATCTCCTGAAGAACACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 72 bp GCCTTGGCAATCTGCCCTAGCTCCTGTATCAAGCCCTaGAAGCAGTCCTTACGGAGCAAATGCTGGCAGGAT +
Preference number: 6 (lower is better)
Translates to: ALAICPSSCIKP*KQSLRSKCWQD
Trigger: ATCCTGCCAGCATTTGCTCCGTAAGGACTGCTTCCAGGGCTTGATACAGGAGCTAGGGCAGATTGCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646038.2
CDS TCA 72 bp CTTCTGTGGCTTCAGTTTGAACACAGGCATCTCTCCTaGGGAGGCAGCACAGATCTTGAGTCGCTCCAGTCG +
Preference number: 6 (lower is better)
Translates to: LLWLQFEHRHLS*GGSTDLESLQS
Trigger: CGACTGGAGCGACTCAAGATCTGTGCTGCCTCCTCAGGAGAGATGCCTGTGTTCAAACTGAAGCCACAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000530502.1
ENST00000646038.2
CDS TCA 72 bp CAACCTCGGAGTCAGGCTGATGGGGGAGGAGAGCAGTaGTGGTCTAGCCTGTTTCTACCAGTCCATCTCTTT +
Preference number: 6 (lower is better)
Translates to: QPRSQADGGGEQ*WSSLFLPVHLF
Trigger: AAAGAGATGGACTGGTAGAAACAGGCTAGACCATCACTGCTCTCCTCCCCCATCAGCCTGACTCCGAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529211.1
CDS TCA 72 bp ATGAGAGCCCATACCTGGCAGGTCCTGATGGCACAATaGGCAGGTCATTACCATGGCCTCCATCTGTCCACT +
Preference number: 6 (lower is better)
Translates to: MRAHTWQVLMAQ*AGHYHGLHLST
Trigger: AGTGGACAGATGGAGGCCATGGTAATGACCTGCTCATTGTGCCATCAGGACCTGCCAGGTATGGGCTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646038.2
CDS CCA 72 bp GATGCTGAGGAGATTTGGTCTGACTCAGTTGCAGGCTaGGCTGTTGAGCCTGGAGAAGAAGCTCCAAGTCCT +
Preference number: 6 (lower is better)
Translates to: DAEEIWSDSVAG*AVEPGEEAPSP
Trigger: AGGACTTGGAGCTTCTTCTCCAGGCTCAACAGCCCAGCCTGCAACTGAGTCAGACCAAATCTCCTCAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CCA 72 bp CTGGTACTGCTGCAGAGCTGTAGACGTGCTGACCACTaGCGCCAGTGGAGGTTTCTTCACAGAGAGGTTAAT +
Preference number: 6 (lower is better)
Translates to: LVLLQSCRRADH*RQWRFLHREVN
Trigger: ATTAACCTCTCTGTGAAGAAACCTCCACTGGCGCCAGTGGTCAGCACGTCTACAGCTCTGCAGCAGTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS TCA 72 bp ACACAGGCATCTCTCCTGAGGAGGCAGCACAGATCTTaGGTCGCTCCAGTCGCACATAGGGAATCTTATGCT +
Preference number: 6 (lower is better)
Translates to: TQASLLRRQHRS*VAPVAHRESYA
Trigger: AGCATAAGATTCCCTATGTGCGACTGGAGCGACTCAAGATCTGTGCTGCCTCCTCAGGAGAGATGCCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000530502.1
ENST00000646038.2
CDS TCA 72 bp GAACTTAGCACAGTTCCAGAACATGAGGCGCACATCTaGTACCACCTCCTCTGGGGTGGTATAGTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: ELSTVPEHEAHI*YHLLWGGIVSW
Trigger: CCAGCTCACTATACCACCCCAGAGGAGGTGGTATCAGATGTGCGCCTCATGTTCTGGAACTGTGCTAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000530502.1
ENST00000646038.2
CDS GCA 72 bp CACTCCCTGGGACCAAAAAGAGAGTCTAGCCATCTCTaGCGTGGAAAACAAAGCGTGGAGGTGTCTGCTGTT +
Preference number: 6 (lower is better)
Translates to: HSLGPKRESSHL*RGKQSVEVSAV
Trigger: AACAGCAGACACCTCCACGCTTTGTTTTCCACGGCAGAGATGGCTAGACTCTCTTTTTGGTCCCAGGGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS CAA 90 bp AAGATGCTGAGGAGATTTGGTCTGACTCAGTTGCAGGCTGGGCTGTaGAGCCTGGAGAAGAAGCTCCAAGTCCTTCTGCATTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: KMLRRFGLTQLQAGL*SLEKKLQVLLHFLQ
Trigger: CTGGAGGAAATGCAGAAGGACTTGGAGCTTCTTCTCCAGGCTCAACAGCCCAGCCTGCAACTGAGTCAGACCAAATCTCCTCAGCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CAA 90 bp CACAATGGTTTGCTGAAGATGCTGAGGAGATTTGGTCTGACTCAGTaGCAGGCTGGGCTGTTGAGCCTGGAGAAGAAGCTCCAAGTCCTT +
Preference number: 6 (lower is better)
Translates to: HNGLLKMLRRFGLTQ*QAGLLSLEKKLQVL
Trigger: AAGGACTTGGAGCTTCTTCTCCAGGCTCAACAGCCCAGCCTGCAACTGAGTCAGACCAAATCTCCTCAGCATCTTCAGCAAACCATTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS TCA 72 bp GACCGGGGACTATGGGACCTTGTCCCAGTAAGTCAGTaGAGCGAGTGGAATCCTCACTTTCCATCTTACACA +
Preference number: 6 (lower is better)
Translates to: DRGLWDLVPVSQ*SEWNPHFPSYT
Trigger: TGTGTAAGATGGAAAGTGAGGATTCCACTCGCTTCACTGACTTACTGGGACAAGGTCCCATAGTCCCCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402157.7
ENST00000646038.2
CDS TCA 72 bp AGCTCCCATCCTGATCATTCTTCTGTGGCTTCAGTTTaGACACAGGCATCTCTCCTGAGGAGGCAGCACAGA +
Preference number: 6 (lower is better)
Translates to: SSHPDHSSVASV*TQASLLRRQHR
Trigger: TCTGTGCTGCCTCCTCAGGAGAGATGCCTGTGTTCAAACTGAAGCCACAGAAGAATGATCAGGATGGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000530502.1
ENST00000646038.2
CDS GCA 72 bp CCACCTTCAGTAGTTATGCAGCCAAGAGAAGCTAGCTaGTTGGTCCAGAAGTTAGGCTCCCAGGTGAATCTG +
Preference number: 6 (lower is better)
Translates to: PPSVVMQPREAS*LVQKLGSQVNL
Trigger: CAGATTCACCTGGGAGCCTAACTTCTGGACCAAGCAGCTAGCTTCTCTTGGCTGCATAACTACTGAAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 72 bp TGTTCAAAATTCTCACACTCTTTTGGGTTCTGGTACTaGTGCAGAGCTGTAGACGTGCTGACCACTGGCGCC +
Preference number: 6 (lower is better)
Translates to: CSKFSHSFGFWY*CRAVDVLTTGA
Trigger: GGCGCCAGTGGTCAGCACGTCTACAGCTCTGCAGCAGTACCAGAACCCAAAAGAGTGTGAGAATTTTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS GCA 72 bp ACAATACCAGCTTCTCACACTTCTTCTGGTCATACATaGTTAGGCCAGGAGATGCCCGCATTCCAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: TIPASHTSSGHT*LGQEMPAFQAG
Trigger: ACCAGCCTGGAATGCGGGCATCTCCTGGCCTAAGCATGTATGACCAGAAGAAGTGTGAGAAGCTGGTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000530502.1
ENST00000646038.2
CDS CAA 72 bp CTGCCGTGGAAAACAAAGCGTGGAGGTGTCTGCTGTTaGTCTGAAGGCGAACAAACCCTTCAAAAGTGTCCC +
Preference number: 6 (lower is better)
Translates to: LPWKTKRGGVCC*SEGEQTLQKCP
Trigger: GGGACACTTTTGAAGGGTTTGTTCGCCTTCAGACAAACAGCAGACACCTCCACGCTTTGTTTTCCACGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS TCA 72 bp ATGACAACTCCATCTCCAGAGTGTTGGAAAAGCCCATaGTGCTCAGCGAGGTGGAGTGCTTTCTCACCACAT +
Preference number: 6 (lower is better)
Translates to: MTTPSPECWKSP*CSARWSAFSPH
Trigger: ATGTGGTGAGAAAGCACTCCACCTCGCTGAGCATCATGGGCTTTTCCAACACTCTGGAGATGGAGTTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS TCA 72 bp GACCGGGGACTATGGGACCTTGTCCCAGTAAGTCAGTaGAGCGAGTGGAATCCTCACTTTCCATCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: DRGLWDLVPVSQ*SEWNPHFPSFK
Trigger: TTTGAAAGATGGAAAGTGAGGATTCCACTCGCTTCACTGACTTACTGGGACAAGGTCCCATAGTCCCCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481014.6
CDS TCA 72 bp GTGGAAAACAAAGCGTGGAGGTGTCTGCTGTTTGTCTaGAGGCGAACAAACCCTTCAAAAGTGTCCCGTACC +
Preference number: 6 (lower is better)
Translates to: VENKAWRCLLFV*RRTNPSKVSRT
Trigger: GGTACGGGACACTTTTGAAGGGTTTGTTCGCCTTCAGACAAACAGCAGACACCTCCACGCTTTGTTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS GCA 72 bp CCATCTCTGCCGTGGAAAACAAAGCGTGGAGGTGTCTaGTGTTTGTCTGAAGGCGAACAAACCCTTCAAAAG +
Preference number: 6 (lower is better)
Translates to: PSLPWKTKRGGV*CLSEGEQTLQK
Trigger: CTTTTGAAGGGTTTGTTCGCCTTCAGACAAACAGCAGACACCTCCACGCTTTGTTTTCCACGGCAGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS TCA 72 bp AGCTGGGTCCTTCTTTTGCAGCTTCCTCCGGATGATTaGCAGGTCCATGGGCCTCTTGATAATCTGGTAATA +
Preference number: 6 (lower is better)
Translates to: SWVLLLQLPPDD*QVHGPLDNLVI
Trigger: TATTACCAGATTATCAAGAGGCCCATGGACCTGTCAATCATCCGGAGGAAGCTGCAAAAGAAGGACCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000525788.1
ENST00000530502.1
ENST00000646038.2
CDS TCA 72 bp AGTGCTCTGAAAATGTTGGTTGTTATCCTTGTGGACTaGAGTGTTCGAAACCGTACACCGCCACCAGGACAC +
Preference number: 6 (lower is better)
Translates to: SALKMLVVILVD*SVRNRTPPPGH
Trigger: GTGTCCTGGTGGCGGTGTACGGTTTCGAACACTTCAGTCCACAAGGATAACAACCAACATTTTCAGAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS CCA 72 bp GCCACCTGTGTAGTCACACCTTCCAGAAGCATCCTCTaGTTTTGCAAAACTTCTTCAACATGTCTGCACCTG +
Preference number: 6 (lower is better)
Translates to: ATCVVTPSRSIL*FCKTSSTCLHL
Trigger: CAGGTGCAGACATGTTGAAGAAGTTTTGCAAAACCAGAGGATGCTTCTGGAAGGTGTGACTACACAGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS CAA 72 bp CCTTCAGTAGTTATGCAGCCAAGAGAAGCTAGCTGCTaGGTCCAGAAGTTAGGCTCCCAGGTGAATCTGATA +
Preference number: 6 (lower is better)
Translates to: PSVVMQPREASC*VQKLGSQVNLI
Trigger: TATCAGATTCACCTGGGAGCCTAACTTCTGGACCAAGCAGCTAGCTTCTCTTGGCTGCATAACTACTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CAA 72 bp CCCTTCAAAAGTGTCCCGTACCTGTGCCTCTCCTTATaGGTAGACAAGCTTGACCTGTTTCTGCAGTCAATC +
Preference number: 6 (lower is better)
Translates to: PFKSVPYLCLSL*VDKLDLFLQSI
Trigger: GATTGACTGCAGAAACAGGTCAAGCTTGTCTACCAATAAGGAGAGGCACAGGTACGGGACACTTTTGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS CAA 90 bp TTCACACCCAGGACAGGAGATGAGCTCTGTTCAAATGTTCCACCTTaGAGCAGCAAGATCAATTTCCCCCGGGATGAGTTAATTAGTCCC +
Preference number: 6 (lower is better)
Translates to: FTPRTGDELCSNVPP*SSKINFPRDELISP
Trigger: GGGACTAATTAACTCATCCCGGGGGAAATTGATCTTGCTGCTCAAAGGTGGAACATTTGAACAGAGCTCATCTCCTGTCCTGGGTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402157.7
ENST00000531498.5
CDS GCA 72 bp AAGGCGAACAAACCCTTCAAAAGTGTCCCGTACCTGTaGCTCTCCTTATTGGTAGACAAGCTTGACCTGTTT +
Preference number: 6 (lower is better)
Translates to: KANKPFKSVPYL*LSLLVDKLDLF
Trigger: AAACAGGTCAAGCTTGTCTACCAATAAGGAGAGGCACAGGTACGGGACACTTTTGAAGGGTTTGTTCGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS CAA 72 bp AGGACAGGAGATGAGCTCTGTTCAAATGTTCCACCTTaGAGCAGCAAGATCAATTTCCCCCGGGATGAGTTA +
Preference number: 6 (lower is better)
Translates to: RTGDELCSNVPP*SSKINFPRDEL
Trigger: TAACTCATCCCGGGGGAAATTGATCTTGCTGCTCAAAGGTGGAACATTTGAACAGAGCTCATCTCCTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402157.7
ENST00000531498.5
CDS CAA 90 bp ATGTGCCACCTGTGTAGTCACACCTTCCAGAAGCATCCTCTGGTTTaGCAAAACTTCTTCAACATGTCTGTGTTCTTTGTGTTCCACCAC +
Preference number: 6 (lower is better)
Translates to: MCHLCSHTFQKHPLV*QNFFNMSVFFVFHH
Trigger: GTGGTGGAACACAAAGAACACAGACATGTTGAAGAAGTTTTGCAAAACCAGAGGATGCTTCTGGAAGGTGTGACTACACAGGTGGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402157.7
CDS CAA 90 bp ATGTGCCACCTGTGTAGTCACACCTTCCAGAAGCATCCTCTGGTTTaGCAAAACTTCTTCAACATGTCTGCACCTGTGTTCTTTGTGTTC +
Preference number: 6 (lower is better)
Translates to: MCHLCSHTFQKHPLV*QNFFNMSAPVFFVF
Trigger: GAACACAAAGAACACAGGTGCAGACATGTTGAAGAAGTTTTGCAAAACCAGAGGATGCTTCTGGAAGGTGTGACTACACAGGTGGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS CAA 90 bp GCGAACAAACCCTTCAAAAGTGTCCCGTACCTGTGCCTCTCCTTATaGGTAGACAAGCTTGACCTGTTTCTGCAGTCAATCTGTTATATG +
Preference number: 6 (lower is better)
Translates to: ANKPFKSVPYLCLSL*VDKLDLFLQSICYM
Trigger: CATATAACAGATTGACTGCAGAAACAGGTCAAGCTTGTCTACCAATAAGGAGAGGCACAGGTACGGGACACTTTTGAAGGGTTTGTTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS TCA 72 bp CTCTCACACCTGAGAGATGCTGTTGGCCAGGCGAAATaGCATTCTTTTTGCTCTTTCATTCTCCATATGTCG +
Preference number: 6 (lower is better)
Translates to: LSHLRDAVGQAK*HSFCSFILHMS
Trigger: CGACATATGGAGAATGAAAGAGCAAAAAGAATGTCATTTCGCCTGGCCAACAGCATCTCTCAGGTGTGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529211.1
ENST00000646038.2
CDS TCA 72 bp GATGAAGACCATAATGCTGACCACCTATGCAGCGTCTaGCAAGTCACCCAATTCTTCTGTGCTTCAGTTTTC +
Preference number: 6 (lower is better)
Translates to: DEDHNADHLCSV*QVTQFFCASVF
Trigger: GAAAACTGAAGCACAGAAGAATTGGGTGACTTGTCAGACGCTGCATAGGTGGTCAGCATTATGGTCTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS GCA 72 bp CCTATGCAGCGTCTGACAAGTCACCCAATTCTTCTGTaGTTCAGTTTTCACACACGTAAAATGAGGCTGGTA +
Preference number: 6 (lower is better)
Translates to: PMQRLTSHPILL*FSFHTRKMRLV
Trigger: TACCAGCCTCATTTTACGTGTGTGAAAACTGAAGCACAGAAGAATTGGGTGACTTGTCAGACGCTGCATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS CAA 72 bp CTGTGTAGTCACACCTTCCAGAAGCATCCTCTGGTTTaGCAAAACTTCTTCAACATGTCTGCACCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: LCSHTFQKHPLV*QNFFNMSAPVF
Trigger: GAACACAGGTGCAGACATGTTGAAGAAGTTTTGCAAAACCAGAGGATGCTTCTGGAAGGTGTGACTACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS CAA 72 bp ACCAGCTCTTTGCTGAAAAGAAAAGGGACACTGGTTTaGCTGCAGACAGCCCAGTTGATGAAATTCTGCACA +
Preference number: 6 (lower is better)
Translates to: TSSLLKRKGTLV*LQTAQLMKFCT
Trigger: TGTGCAGAATTTCATCAACTGGGCTGTCTGCAGCAAAACCAGTGTCCCTTTTCTTTTCAGCAAAGAGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529057.1
CDS CAA 72 bp TCCAGCTCTTTGCTGAAAAGAAAAGGGACACTGGTTTaGCTGCAGACAGCCCAGTTGATGAAATTCTGCACA +
Preference number: 6 (lower is better)
Translates to: SSSLLKRKGTLV*LQTAQLMKFCT
Trigger: TGTGCAGAATTTCATCAACTGGGCTGTCTGCAGCAAAACCAGTGTCCCTTTTCTTTTCAGCAAAGAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531498.5
CDS CAA 90 bp ATTCCTCTTACCAGCTCTTTGCTGAAAAGAAAAGGGACACTGGTTTaGCTGCAGACAGCCCAGTTGATGAAATTCTGCACATGCTCAAAC +
Preference number: 6 (lower is better)
Translates to: IPLTSSLLKRKGTLV*LQTAQLMKFCTCSN
Trigger: GTTTGAGCATGTGCAGAATTTCATCAACTGGGCTGTCTGCAGCAAAACCAGTGTCCCTTTTCTTTTCAGCAAAGAGCTGGTAAGAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529057.1
CDS CAA 90 bp ATTATCACCTCCAGCTCTTTGCTGAAAAGAAAAGGGACACTGGTTTaGCTGCAGACAGCCCAGTTGATGAAATTCTGCACATGCTCAAAC +
Preference number: 6 (lower is better)
Translates to: IITSSSLLKRKGTLV*LQTAQLMKFCTCSN
Trigger: GTTTGAGCATGTGCAGAATTTCATCAACTGGGCTGTCTGCAGCAAAACCAGTGTCCCTTTTCTTTTCAGCAAAGAGCTGGAGGTGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531498.5
CDS TCA 72 bp CCCGTACCTGTGCCTCTCCTTATTGGTAGACAAGCTTaGCCTGTTTCTGCAGTCAATCTGTTATATGTTGTT +
Preference number: 6 (lower is better)
Translates to: PVPVPLLIGRQA*PVSAVNLLYVV
Trigger: AACAACATATAACAGATTGACTGCAGAAACAGGTCAAGCTTGTCTACCAATAAGGAGAGGCACAGGTACGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS GCA 72 bp TGTGTAGTCACACCTTCCAGAAGCATCCTCTGGTTTTaGAAAACTTCTTCAACATGTCTGCACCTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: CVVTPSRSILWF*KTSSTCLHLCS
Trigger: AGAACACAGGTGCAGACATGTTGAAGAAGTTTTGCAAAACCAGAGGATGCTTCTGGAAGGTGTGACTACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481014.6
ENST00000531498.5
ENST00000646038.2
CDS CAA 72 bp ATCCCCTCTAATTCCTCTATTAGCCCATTGGCCTGTTaGTTCAGCTCATTCATCAGAACCATCTTGGCCATT +
Preference number: 6 (lower is better)
Translates to: IPSNSSISPLAC*FSSFIRTILAI
Trigger: AATGGCCAAGATGGTTCTGATGAATGAGCTGAACAAACAGGCCAATGGGCTAATAGAGGAATTAGAGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529057.1
ENST00000531498.5
ENST00000646038.2
CDS CAA 72 bp ATCAGCTCTTTGCTGAAAAGAAAAGGGACACTGGTTTaGCTGCAGACAGCCCAGTTGATGAAATTCTGCACA +
Preference number: 6 (lower is better)
Translates to: ISSLLKRKGTLV*LQTAQLMKFCT
Trigger: TGTGCAGAATTTCATCAACTGGGCTGTCTGCAGCAAAACCAGTGTCCCTTTTCTTTTCAGCAAAGAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000646038.2
CDS CAA 72 bp AATCCAGCAGTCTCACTTCTGGGAATTTATCCTCCATaGACAGATCATCTTCCCAAGGTTAGGTTCCAGGTA +
Preference number: 6 (lower is better)
Translates to: NPAVSLLGIYPP*TDHLPKVRFQV
Trigger: TACCTGGAACCTAACCTTGGGAAGATGATCTGTCAATGGAGGATAAATTCCCAGAAGTGAGACTGCTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644261.1
CDS CAA 90 bp TTCCCGCAGCACCCTGAACATCCTTCCAGTACAACGAATATCACATaGCATTTTAAATACCTGTTCATATGTCTTTGCTCTGGTCCCCAT +
Preference number: 6 (lower is better)
Translates to: FPQHPEHPSSTTNIT*HFKYLFICLCSGPH
Trigger: ATGGGGACCAGAGCAAAGACATATGAACAGGTATTTAAAATGCAATGTGATATTCGTTGTACTGGAAGGATGTTCAGGGTGCTGCGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402157.7
ENST00000531498.5
CDS TCA 72 bp TGTTCAGCTCATTCATCAGAACCATCTTGGCCATTTTaGTCTGGTTTTCCACCTTCCTATGCTGATGCTTCA +
Preference number: 6 (lower is better)
Translates to: CSAHSSEPSWPF*SGFPPSYADAS
Trigger: TGAAGCATCAGCATAGGAAGGTGGAAAACCAGATCAAAATGGCCAAGATGGTTCTGATGAATGAGCTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529057.1
ENST00000531498.5
ENST00000646038.2
CDS TCA 72 bp ACCCAGCTCATTTCTTGTGCACTTACTGGCCAGTTTTaGTGTCAAATAGACGACGATGTCTTCTTTGATCTC +
Preference number: 6 (lower is better)
Translates to: TQLISCALTGQF*CQIDDDVFFDL
Trigger: GAGATCAAAGAAGACATCGTCGTCTATTTGACATCAAAACTGGCCAGTAAGTGCACAAGAAATGAGCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS CAA 90 bp TCATTAGTAATCCCCTCTAATTCCTCTATTAGCCCATTGGCCTGTTaGTTCAGCTCATTCATCAGAACCATCTTGGCCATTTTGATCTGG +
Preference number: 6 (lower is better)
Translates to: SLVIPSNSSISPLAC*FSSFIRTILAILIW
Trigger: CCAGATCAAAATGGCCAAGATGGTTCTGATGAATGAGCTGAACAAACAGGCCAATGGGCTAATAGAGGAATTAGAGGGGATTACTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529057.1
ENST00000531498.5
ENST00000646038.2
CDS GCA 72 bp TGTGTAGTCACACCTTCCAGAAGCATCCTCTGGTTTTaGAAAACTTCTTCAACATGTCTGTGTTCTTTGTGT +
Preference number: 6 (lower is better)
Translates to: CVVTPSRSILWF*KTSSTCLCSLC
Trigger: ACACAAAGAACACAGACATGTTGAAGAAGTTTTGCAAAACCAGAGGATGCTTCTGGAAGGTGTGACTACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402157.7
CDS CAA 72 bp TCATTAGTAATCCCCTCTAATTCCTCTATTAGCCCATaGGCCTGTTTGTTCAGCTCATTCATCAGAACCATC +
Preference number: 6 (lower is better)
Translates to: SLVIPSNSSISP*ACLFSSFIRTI
Trigger: GATGGTTCTGATGAATGAGCTGAACAAACAGGCCAATGGGCTAATAGAGGAATTAGAGGGGATTACTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529057.1
ENST00000531498.5
ENST00000646038.2
CDS TCA 72 bp AAGCGAGTGGAATCCTCACTTTCCATCTTTCAAAAGTaGAATGTCGACAAGAATCAAAGAACTCAGACATGG +
Preference number: 6 (lower is better)
Translates to: KRVESSLSIFQK*NVDKNQRTQTW
Trigger: CCATGTCTGAGTTCTTTGATTCTTGTCGACATTTCACTTTTGAAAGATGGAAAGTGAGGATTCCACTCGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481014.6
CDS CAA 72 bp GATGCTTCACTTCAAAAATCCTGTCCTCAATTTGCTTaGCAGATGTCTGTAGACTGGATTTCTTATGTGCCA +
Preference number: 6 (lower is better)
Translates to: DASLQKSCPQFA*QMSVDWISYVP
Trigger: TGGCACATAAGAAATCCAGTCTACAGACATCTGCAAAGCAAATTGAGGACAGGATTTTTGAAGTGAAGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000402157.7
ENST00000481014.6
ENST00000529057.1
ENST00000531498.5
ENST00000646038.2
CDS CAA 72 bp GTAGTGCTGTACCTTCAGGCAGATGTATTTTGTAAATaGCCAAGTGCTCTGAAAATGTTGGTTGTTATCCTT +
Preference number: 6 (lower is better)
Translates to: VVLYLQADVFCK*PSALKMLVVIL
Trigger: AAGGATAACAACCAACATTTTCAGAGCACTTGGCAATTTACAAAATACATCTGCCTGAAGGTACAGCACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644261.1
ENST00000646038.2
CDS TCA 72 bp AGTCAATCTGTTATATGTTGTTTTGTTCACAGTATATaGGGAAAATCCAGTCTCACACAGACATACAGCTCC +
Preference number: 6 (lower is better)
Translates to: SQSVICCFVHSI*GKSSLTQTYSS
Trigger: GGAGCTGTATGTCTGTGTGAGACTGGATTTTCCTCATATACTGTGAACAAAACAACATATAACAGATTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646038.2
CDS TCA 72 bp AGTCAATCTGTTATATGTTGTTTTGTTCACAGTATATaGGGAAAATCCAGTCTCACACAGACATACAGCATA +
Preference number: 6 (lower is better)
Translates to: SQSVICCFVHSI*GKSSLTQTYSI
Trigger: TATGCTGTATGTCTGTGTGAGACTGGATTTTCCTCATATACTGTGAACAAAACAACATATAACAGATTGACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644261.1