RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM6 (Homo sapiens)

Ensembl gene IDs: ENSG00000121236

Ensembl transcript IDs: ENST00000278302.9, ENST00000380097.8, ENST00000380107.5, ENST00000424369.5, ENST00000445329.5, ENST00000469187.5, ENST00000481603.1, ENST00000506134.5, ENST00000507320.5, ENST00000511284.5, ENST00000515022.5, ENST00000621176.1

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACATCTCAATTCAGACTAGGCATGTATGAAGTACTCAACAGACATTaGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCAT +
Preference number: 1 (lower is better)
Translates to: TSQFRLGMYEVLNRH*WLLDTIWDSQCHSH
Trigger: ATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACATGCCTAGTCTGAATTGAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR GCA 90 bp CTCAAGACCTGTCATCAGTCAAAGATGCTTACTCTCACCACTGGGTaGATCCTAGTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTG +
Preference number: 1 (lower is better)
Translates to: LKTCHQSKMLTLTTG*ILVLSNCLKRKNCL
Trigger: CAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTACTAGGATGCACCCAGTGGTGAGAGTAAGCATCTTTGACTGATGACAGGTCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
3UTR CCA 90 bp AGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTaGAAAAGCTGGAAGAAATCATCCTCTTCCTTTAAGTGCTTTATA +
Preference number: 1 (lower is better)
Translates to: SSSLNSCLFLRIKRV*KSWKKSSSSFKCFI
Trigger: TATAAAGCACTTAAAGGAAGAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR CCA 90 bp CTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTaGAAGAAATCATCCTCTTCCTTTAAGTGCTTTATATTGTTCATA +
Preference number: 1 (lower is better)
Translates to: LNSCLFLRIKRVWKS*KKSSSSFKCFILFI
Trigger: TATGAACAATATAAAGCACTTAAAGGAAGAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR TCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATGGCAGGAGGTTCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: IGGSWIPYGTASAILILDGRRFA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGAACCTCCTGCC...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR TCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCGGCAGGAGGTTCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTAGRRFA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGAACCTCCTGCC...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCGTAATCCCAGCACTTTaGGAGACCGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIVIPAL*ETEAGG
Trigger: TCCACCCGCCTCGGTCTCCCAAAGTGCTGGGATTAC...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCGTAATCCCAGCACTTTaGGAGACCGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTAVIPAL*ETEAGG
Trigger: TCCACCCGCCTCGGTCTCCCAAAGTGCTGGGATTAC...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCGCTTACTCTCACCACTaGGTGCATCCTAGTACTGAG +
Preference number: 2 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTAAYSHH*VHPSTE
Trigger: CTCAGTACTAGGATGCACCCAGTGGTGAGAGTAAGC...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR TCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCGGCAGGAGGTTCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPGRRFA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGAACCTCCTGCC...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR TCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGTTAATGGCAAAATACTaGAAGCGCCCCCTATCCACC +
Preference number: 2 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWLMAKY*KRPLST
Trigger: GGTGGATAGGGGGCGCTTTCAGTATTTTGCCATTAA...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR GCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGACTCTCACCACTGGGTaGATCCTAGTACTGAGTAAC +
Preference number: 2 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWTLTTG*ILVLSN
Trigger: GTTACTCAGTACTAGGATGCACCCAGTGGTGAGAGT...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCGGTACTTATCAGAAGTaGGTGGGAACAGAAGAATAT +
Preference number: 2 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIGTYQK*VGTEEY
Trigger: ATATTCTTCTGTTCCCACCCACTTCTGATAAGTACC...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR TCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCTGCCATTCTCATCCTTaGTATTTGTTTCTACCCTCA +
Preference number: 2 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTACHSHP*YLFLPS
Trigger: TGAGGGTAGAAACAAATATCAAGGATGAGAATGGCA...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR TCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCTTAATGGCAAAATACTaGAAGCGCCCCCTATCCACC +
Preference number: 2 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPLMAKY*KRPLST
Trigger: GGTGGATAGGGGGCGCTTTCAGTATTTTGCCATTAA...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR GCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCACTCTCACCACTGGGTaGATCCTAGTACTGAGTAAC +
Preference number: 2 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPTLTTG*ILVLSN
Trigger: GTTACTCAGTACTAGGATGCACCCAGTGGTGAGAGT...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCGGTACTTATCAGAAGTaGGTGGGAACAGAAGAATAT +
Preference number: 2 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPGTYQK*VGTEEY
Trigger: ATATTCTTCTGTTCCCACCCACTTCTGATAAGTACC...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CAA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATTGCAGTGAGCCGAGATaGCGCCAGTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: IGGSWIPYGTASAILILDCSEPR*RQCTPA
Trigger: GGCTGGAGTGCACTGGCGCAATCTCGGCTCACTGCA...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CAA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCTGCAGTGAGCCGAGATaGCGCCAGTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTACSEPR*RQCTPA
Trigger: GGCTGGAGTGCACTGGCGCAATCTCGGCTCACTGCA...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CAA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCTGTAATCCCAGCACTTaGGGAGACCGAGGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHICNPST*GDRGGW
Trigger: CCACCCGCCTCGGTCTCCCAAAGTGCTGGGATTACA...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
3UTR CCA 72 bp TTCAGACTAGGCATGTATGAAGTACTCAACAGACATTaGTGGCTCCTGGATACCATATGGGACAGCCAGTGC +
Preference number: 3 (lower is better)
Translates to: FRLGMYEVLNRH*WLLDTIWDSQC
Trigger: GCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACATGCCTAGTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CAA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCTGTAATCCCAGCACTTaGGGAGACCGAGGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPCNPST*GDRGGW
Trigger: CCACCCGCCTCGGTCTCCCAAAGTGCTGGGATTACA...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CAA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCTCACTCAACAGCTGTTaGTTCCTGCGCATAAAGAGA +
Preference number: 3 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTASLNSC*FLRIKR
Trigger: TCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGA...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CAA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTTCACTCAACAGCTGTTaGTTCCTGCGCATAAAGAGA +
Preference number: 3 (lower is better)
Translates to: GSWIPYGTASAILILDICSLNSC*FLRIKR
Trigger: TCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGA...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR-3UTR CAA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTCAGAACTTCCTAAATTaGATCCCCTGCATCAATCAA +
Preference number: 3 (lower is better)
Translates to: GSWIPYGTASAILILDICQNFLN*IPCINQ
Trigger: TTGATTGATGCAGGGGATCAAATTTAGGAAGTTCTG...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR TCA 72 bp AACCTGCATCAAATACTATGCTTAATGGCAAAATACTaGAAGCGCCCCCTATCCACCTCAAGACCTGTCATC +
Preference number: 3 (lower is better)
Translates to: NLHQILCLMAKY*KRPLSTSRPVI
Trigger: GATGACAGGTCTTGAGGTGGATAGGGGGCGCTTTCAGTATTTTGCCATTAAGCATAGTATTTGATGCAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
3UTR TCA 72 bp TACATTGAGCACATCTCAATTCAGACTAGGCATGTATaGAGTACTCAACAGACATTGGTGGCTCCTGGATAC +
Preference number: 3 (lower is better)
Translates to: YIEHISIQTRHV*STQQTLVAPGY
Trigger: GTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACATGCCTAGTCTGAATTGAGATGTGCTCAATGTA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR CCA 72 bp CTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTaGAAAAGCTGGAAGAAATCATCCTCTTCCTTTAAG +
Preference number: 3 (lower is better)
Translates to: LNSCLFLRIKRV*KSWKKSSSSFK
Trigger: CTTAAAGGAAGAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
3UTR GCA 72 bp TGTCATCAGTCAAAGATGCTTACTCTCACCACTGGGTaGATCCTAGTACTGAGTAACTGTTTAAAACGAAAG +
Preference number: 3 (lower is better)
Translates to: CHQSKMLTLTTG*ILVLSNCLKRK
Trigger: CTTTCGTTTTAAACAGTTACTCAGTACTAGGATGCACCCAGTGGTGAGAGTAAGCATCTTTGACTGATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCGCTCCAGATCCGAGATaGGCTCTCGCAGCGACTGGG +
Preference number: 4 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTAAPDPR*ALAATG
Trigger: CCCAGTCGCTGCGAGAGCTCATCTCGGATCTGGAGC...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGGCTCCAGATCCGAGATaGGCTCTCGCAGCGACTGGG +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQAPDPR*ALAATG
Trigger: CCCAGTCGCTGCGAGAGCTCATCTCGGATCTGGAGC...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTCCAGCCTTTGGCCGTTaGACGGACGGACCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICPAFGR*TDGPTG
Trigger: ACCTGTGGGTCCGTCCGTTCAACGGCCAAAGGCTGG...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380097.8
CDS-3UTR CCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAGGCCGCAGGTTCCCTaGCTGGTAGCTGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWRPQVP*LVAGLA
Trigger: TGCCAGACCAGCTACCAGCCAGGGAACCTGCGGCCT...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000621176.1
CDS-3UTR TCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTTCAGAGCCAAGGACTTaGAGCAGCCGCGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICSEPRT*SSRVLH
Trigger: GTGGAGGACGCGGCTGCTTCAAGTCCTTGGCTCTGA...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278302.9
CDS-3UTR TCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATCCCTGCCATTTGGTGTaGTGCAGGCTTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDPCHLV*CRLGRS
Trigger: GCTTCTGCCAAGCCTGCATCACACCAAATGGCAGGG...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000621176.1
CDS-3UTR TCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGGCTCCAGATCCGAGATaGGCTCTCGCAGCGACTGGG +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGAPDPR*ALAATG
Trigger: CCCAGTCGCTGCGAGAGCTCATCTCGGATCTGGAGC...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTGGCAGGAGGTTCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICGRRFA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGAACCTCCTGCC...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAAAGGCCGCAGGTTCCCTaGCTGGTAGCTGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEERPQVP*LVAGLA
Trigger: TGCCAGACCAGCTACCAGCCAGGGAACCTGCGGCCT...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCTTCTCCTGGTACTCCTaGGCAACCTCCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIFSWYS*ATSSTR
Trigger: CCTCGTGGAGGAGGTTGCCCAGGAGTACCAGGAGAA...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATCCAACACTACCTCTCTaGGCCGCCTCACTATGTTGG +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDPTLPL*AASLCW
Trigger: CCAACATAGTGAGGCGGCTCAGAGAGGTAGTGTTGG...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380097.8
CDS-3UTR TCA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCGCTCCAGATCCGAGATaGGCTCTCGCAGCGACTGGG +
Preference number: 4 (lower is better)
Translates to: LFVPAHKESVEKLEEIILAPDPR*ALAATG
Trigger: CCCAGTCGCTGCGAGAGCTCATCTCGGATCTGGAGC...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGGCTCCAGATCCGAGATaGGCTCTCGCAGCGACTGGG +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKAPDPR*ALAATG
Trigger: CCCAGTCGCTGCGAGAGCTCATCTCGGATCTGGAGC...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGGGCAGGAGGTTCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGGRRFA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGAACCTCCTGCC...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAAGGCAGGAGGTTCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEEGRRFA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGAACCTCCTGCC...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGTCCCATCCTCCTCTCTaGGCCGCCTCACTATGTTGG +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWSHPPL*AASLCW
Trigger: CCAACATAGTGAGGCGGCTCAGAGAGGAGGATGGGA...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621176.1
CDS-3UTR TCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGCTCTCAGGCTCCATCTaGTTCTCCTCTCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQLSGSI*FSSPPP
Trigger: AGGGGGAGGAGAGGAGAATCAGATGGAGCCTGAGAG...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS-3UTR GCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCCTCCTGGCTCCTGCCTaGCCAACCCTGATTTCTAAG +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHILLAPA*PTLISK
Trigger: CTTAGAAATCAGGGTTGGGCAGGCAGGAGCCAGGAG...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
CDS-3UTR GCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCGTCCCAGTGAATTGCTaGATACCCCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIVPVNC*IPPGSR
Trigger: CCTGGATCCTGGGGGTATGCAGCAATTCACTGGGAC...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCAACCACGCACGACTCTaGTCCGTTCCGTTCCGAGAA +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHINHARL*SVPFRE
Trigger: TTCTCGGAACGGAACGGAGCAGAGTCGTGCGTGGTT...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380097.8
CDS-3UTR CCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGTTCTCCTGGTACTCCTaGGCAACCTCCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQFSWYS*ATSSTR
Trigger: CCTCGTGGAGGAGGTTGCCCAGGAGTACCAGGAGAA...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCAGCGACTGGGTCTGGTaGACCAGATCATTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHISDWVW*TRSFSA
Trigger: GGCTGAGAATGATCTGGTCCACCAGACCCAGTCGCT...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATAGCGACTGGGTCTGGTaGACCAGATCATTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDSDWVW*TRSFSA
Trigger: GGCTGAGAATGATCTGGTCCACCAGACCCAGTCGCT...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATCGCAGCGACTGGGTCTaGTGGACCAGATCATTCTCA +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDRSDWV*WTRSFS
Trigger: TGAGAATGATCTGGTCCACCAGACCCAGTCGCTGCG...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAGCTCTCGCAGCGACTaGGTCTGGTGGACCAGATCA +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQSSRSD*VWWTRS
Trigger: TGATCTGGTCCACCAGACCCAGTCGCTGCGAGAGCT...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGAGCTCTCGCAGCGACTaGGTCTGGTGGACCAGATCA +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWSSRSD*VWWTRS
Trigger: TGATCTGGTCCACCAGACCCAGTCGCTGCGAGAGCT...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCCCAGAGGAGAAGTGCTaGGAGCCCAGGACACTACAG +
Preference number: 4 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTAPEEKC*EPRTLQ
Trigger: CTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGG...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGCCAGAGGAGAAGTGCTaGGAGCCCAGGACACTACAG +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQPEEKC*EPRTLQ
Trigger: CTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGG...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGCCAGAGGAGAAGTGCTaGGAGCCCAGGACACTACAG +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWPEEKC*EPRTLQ
Trigger: CTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGG...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGCCCTGCCATTTGGTGTaGTGCAGGCTTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGPCHLV*CRLGRS
Trigger: GCTTCTGCCAAGCCTGCATCACACCAAATGGCAGGG...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTCCAACACTACCTCTCTaGGCCGCCTCACTATGTTGG +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICPTLPL*AASLCW
Trigger: CCAACATAGTGAGGCGGCTCAGAGAGGTAGTGTTGG...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380097.8
CDS-3UTR TCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGTCCATTGTTGACCCCTaGCATCGACGCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWSIVDP*HRRSRS
Trigger: GGATCTGGAGCGTCGATGTCAGGGGTCAACAATGGA...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCGAATGTAGGTCCCAGTaGATTGCTGCATACCCCCAG +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIECRSQ*IAAYPQ
Trigger: CTGGGGGTATGCAGCAATTCACTGGGACCTACATTC...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCGGCAGGAGGTTCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LFVPAHKESVEKLEEIILGRRFA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGAACCTCCTGCC...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTCCCATCCTCCTCTCTaGGCCGCCTCACTATGTTGG +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGSHPPL*AASLCW
Trigger: CCAACATAGTGAGGCGGCTCAGAGAGGAGGATGGGA...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380107.5
ENST00000621176.1
CDS-3UTR TCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAATGCCCTCAGCTCCTATaGCCTGCCATGATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEECPQLL*PAMIPA
Trigger: GGCAGGAATCATGGCAGGTCATAGGAGCTGAGGGCA...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS-3UTR GCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCCTCCTGGCTCCTGCCTaGCCAACCCTGATTTCTAAG +
Preference number: 4 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTALLAPA*PTLISK
Trigger: CTTAGAAATCAGGGTTGGGCAGGCAGGAGCCAGGAG...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380097.8
CDS-3UTR GCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGGTCCCAGTGAATTGCTaGATACCCCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQVPVNC*IPPGSR
Trigger: CCTGGATCCTGGGGGTATGCAGCAATTCACTGGGAC...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGGTCCCAGTGAATTGCTaGATACCCCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWVPVNC*IPPGSR
Trigger: CCTGGATCCTGGGGGTATGCAGCAATTCACTGGGAC...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGTCAGCTCCTATGACCTaGCATGATTCCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQSAPMT*HDSCPR
Trigger: CCTGGGGCAGGAATCATGGCAGGTCATAGGAGCTGA...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS-3UTR CCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCCTGGAATCTGTGGCCTaGATCAGAGCCAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHILESVA*IRAKDL
Trigger: CAAGTCCTTGGCTCTGATCCAGGCCACAGATTCCAG...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380107.5
CDS-3UTR CCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGAGCGACTGGGTCTGGTaGACCAGATCATTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWSDWVW*TRSFSA
Trigger: GGCTGAGAATGATCTGGTCCACCAGACCCAGTCGCT...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAGCGACTGGGTCTGGTaGACCAGATCATTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQSDWVW*TRSFSA
Trigger: GGCTGAGAATGATCTGGTCCACCAGACCCAGTCGCT...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGCGCAGCGACTGGGTCTaGTGGACCAGATCATTCTCA +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWRSDWV*WTRSFS
Trigger: TGAGAATGATCTGGTCCACCAGACCCAGTCGCTGCG...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGCGCAGCGACTGGGTCTaGTGGACCAGATCATTCTCA +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWRSDWV*WTRSFS
Trigger: TGAGAATGATCTGGTCCACCAGACCCAGTCGCTGCG...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAAAGCTCTCGCAGCGACTaGGTCTGGTGGACCAGATCA +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEESSRSD*VWWTRS
Trigger: TGATCTGGTCCACCAGACCCAGTCGCTGCGAGAGCT...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGAGCTCTCGCAGCGACTaGGTCTGGTGGACCAGATCA +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGSSRSD*VWWTRS
Trigger: TGATCTGGTCCACCAGACCCAGTCGCTGCGAGAGCT...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAACCAGAGGAGAAGTGCTaGGAGCCCAGGACACTACAG +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEEPEEKC*EPRTLQ
Trigger: CTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGG...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGCCAGAGGAGAAGTGCTaGGAGCCCAGGACACTACAG +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGPEEKC*EPRTLQ
Trigger: CTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGG...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTCCTCCGCCAGCCTTTaGCCGTTGAACGGACGGACC +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSSSASL*PLNGRT
Trigger: GGTCCGTCCGTTCAACGGCCAAAGGCTGGCGGAGGA...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380097.8
CDS-3UTR TCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTCAGAGCCAAGGACTTaGAGCAGCCGCGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSSEPRT*SSRVLH
Trigger: GTGGAGGACGCGGCTGCTTCAAGTCCTTGGCTCTGA...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000507320.5
CDS-3UTR TCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATCTGCCTGCCCAACCCTaGTTTCTAAGATGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDLPAQP*FLRCFL
Trigger: CAGGAAACATCTTAGAAATCAGGGTTGGGCAGGCAG...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380097.8
CDS-3UTR TCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTCCATTGTTGACCCCTaGCATCGACGCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGSIVDP*HRRSRS
Trigger: GGATCTGGAGCGTCGATGTCAGGGGTCAACAATGGA...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAATCCATTGTTGACCCCTaGCATCGACGCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEESIVDP*HRRSRS
Trigger: GGATCTGGAGCGTCGATGTCAGGGGTCAACAATGGA...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGGAATGTAGGTCCCAGTaGATTGCTGCATACCCCCAG +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWECRSQ*IAAYPQ
Trigger: CTGGGGGTATGCAGCAATTCACTGGGACCTACATTC...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGGAATGTAGGTCCCAGTaGATTGCTGCATACCCCCAG +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQECRSQ*IAAYPQ
Trigger: CTGGGGGTATGCAGCAATTCACTGGGACCTACATTC...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCGAATGTAGGTCCCAGTaGATTGCTGCATACCCCCAG +
Preference number: 4 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTAECRSQ*IAAYPQ
Trigger: CTGGGGGTATGCAGCAATTCACTGGGACCTACATTC...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGCGCACATCTGGGGAATaGGAAGCCAAGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWRTSGE*EAKKFQ
Trigger: CTGGAACTTCTTGGCTTCTCATTCCCCAGATGTGCG...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380097.8
ENST00000445329.5
ENST00000506134.5
CDS-3UTR TCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCCGCACATCTGGGGAATaGGAAGCCAAGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTARTSGE*EAKKFQ
Trigger: CTGGAACTTCTTGGCTTCTCATTCCCCAGATGTGCG...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380097.8
ENST00000445329.5
CDS-3UTR TCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAAACTTCTCCTCTCTaGCCCGCACATCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWETSPL*PAHLGN
Trigger: ATTCCCCAGATGTGCGGGTCAGAGAGGAGAAGTTTC...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506134.5
CDS-3UTR GCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCAGAACTGCTTTCAGCTaGTTCCCAGGGCCCAACACT +
Preference number: 4 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTARTAFS*FPGPNT
Trigger: AGTGTTGGGCCCTGGGAAGCAGCTGAAAGCAGTTCT...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380097.8
CDS-3UTR GCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCACTCTGTCTGGATCCTaGATCTCTCAGGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHITLSGS*ISQAPS
Trigger: AGATGGAGCCTGAGAGATGCAGGATCCAGACAGAGT...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAAGTCCCAGTGAATTGCTaGATACCCCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEEVPVNC*IPPGSR
Trigger: CCTGGATCCTGGGGGTATGCAGCAATTCACTGGGAC...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGCACAGGTCAGGAGTTTaGGGAAGGCTCATCTCCCAA +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQHRSGV*GRLISQ
Trigger: TTGGGAGATGAGCCTTCCGCAAACTCCTGACCTGTG...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380097.8
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGAGCGACTGGGTCTGGTaGACCAGATCATTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGSDWVW*TRSFSA
Trigger: GGCTGAGAATGATCTGGTCCACCAGACCCAGTCGCT...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGCGCAGCGACTGGGTCTaGTGGACCAGATCATTCTCA +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGRSDWV*WTRSFS
Trigger: TGAGAATGATCTGGTCCACCAGACCCAGTCGCTGCG...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGAGCTCTCGCAGCGACTaGGTCTGGTGGACCAGATCA +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKSSRSD*VWWTRS
Trigger: TGATCTGGTCCACCAGACCCAGTCGCTGCGAGAGCT...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGTGTAGGGAGAGCTTCTaGCTTCCTCAGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWCRESF*LPQGPE
Trigger: TTCTGGACCCTGAGGAAGCCAGAAGCTCTCCCTACA...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGTGTAGGGAGAGCTTCTaGCTTCCTCAGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWCRESF*LPQGPE
Trigger: TTCTGGACCCTGAGGAAGCCAGAAGCTCTCCCTACA...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATGTCCACCAGTACTGGTaGAGTCATTGTAGCTACTCT +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDVHQYW*SHCSYS
Trigger: AGAGTAGCTACAATGACTTCACCAGTACTGGTGGAC...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380097.8
CDS-3UTR TCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATCTCTCAGGCTCCATCTaGTTCTTCCAGGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDLSGSI*FFQDVF
Trigger: GAAAACATCCTGGAAGAATCAGATGGAGCCTGAGAG...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCGCTCCAGATCCGAGATaGGCTCTCGCAGCGACTGGG +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPAPDPR*ALAATG
Trigger: CCCAGTCGCTGCGAGAGCTCATCTCGGATCTGGAGC...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCTCCATTGTTGACCCCTaGCATCGACGCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: LFVPAHKESVEKLEEIILSIVDP*HRRSRS
Trigger: GGATCTGGAGCGTCGATGTCAGGGGTCAACAATGGA...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCCATTGTTGACCCCTaGCATCGACGCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKSIVDP*HRRSRS
Trigger: GGATCTGGAGCGTCGATGTCAGGGGTCAACAATGGA...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAACGCACATCTGGGGAATaGGAAGCCAAGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEERTSGE*EAKKFQ
Trigger: CTGGAACTTCTTGGCTTCTCATTCCCCAGATGTGCG...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380097.8
ENST00000445329.5
ENST00000506134.5
CDS-3UTR GCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTACTCTGTCTGGATCCTaGATCTCTCAGGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICTLSGS*ISQAPS
Trigger: AGATGGAGCCTGAGAGATGCAGGATCCAGACAGAGT...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGACTCTGTCTGGATCCTaGATCTCTCAGGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQTLSGS*ISQAPS
Trigger: AGATGGAGCCTGAGAGATGCAGGATCCAGACAGAGT...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGGTCCCAGTGAATTGCTaGATACCCCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKVPVNC*IPPGSR
Trigger: CCTGGATCCTGGGGGTATGCAGCAATTCACTGGGAC...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGACCTGCCATGATTCCTaGCCCAGGACATCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWTCHDS*PRTSSE
Trigger: TTCTGAAGATGTCCTGGGGCAGGAATCATGGCAGGT...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS-3UTR CCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAACTGGAATCTGTGGCCTaGATCAGAGCCAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEELESVA*IRAKDL
Trigger: CAAGTCCTTGGCTCTGATCCAGGCCACAGATTCCAG...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278302.9
ENST00000380107.5
ENST00000507320.5
CDS-3UTR CCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGCTGCCTGTAGAATCCTaGAATCTGTGGCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQLPVES*NLWPGS
Trigger: TGATCCAGGCCACAGATTCCAGGATTCTACAGGCAG...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380107.5
CDS-3UTR CCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCAGGCCGCAGGTTCCCTaGCTGGTAGCTGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPRPQVP*LVAGLA
Trigger: TGCCAGACCAGCTACCAGCCAGGGAACCTGCGGCCT...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTTCTCCTGGTACTCCTaGGCAACCTCCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSFSWYS*ATSSTR
Trigger: CCTCGTGGAGGAGGTTGCCCAGGAGTACCAGGAGAA...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCAGCGACTGGGTCTGGTaGACCAGATCATTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LFVPAHKESVEKLEEIILSDWVW*TRSFSA
Trigger: GGCTGAGAATGATCTGGTCCACCAGACCCAGTCGCT...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGTAGGGAGAGCTTCTaGCTTCCTCAGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGCRESF*LPQGPE
Trigger: TTCTGGACCCTGAGGAAGCCAGAAGCTCTCCCTACA...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAATGTAGGGAGAGCTTCTaGCTTCCTCAGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEECRESF*LPQGPE
Trigger: TTCTGGACCCTGAGGAAGCCAGAAGCTCTCCCTACA...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCCAGAGGAGAAGTGCTaGGAGCCCAGGACACTACAG +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSPEEKC*EPRTLQ
Trigger: CTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGG...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATGAATATTCAAGAGCTTaGACGACGCAGGGTCATAGG +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDEYSRA*TTQGHR
Trigger: CCTATGACCCTGCGTCGTCCAAGCTCTTGAATATTC...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCGAATATTCAAGAGCTTaGACGACGCAGGGTCATAGG +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIEYSRA*TTQGHR
Trigger: CCTATGACCCTGCGTCGTCCAAGCTCTTGAATATTC...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGCTTACTCTCACCACTaGGTGCATCCTAGTACTGAG +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWAYSHH*VHPSTE
Trigger: CTCAGTACTAGGATGCACCCAGTGGTGAGAGTAAGC...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGCTTCTTTCCCCTTCTTaGCCAATCACTGATTCCCTG +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQLLSPS*PITDSL
Trigger: CAGGGAATCAGTGATTGGTCAAGAAGGGGAAAGAAG...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR TCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATTTCTTTAGAGACTCCTaGAACTTCTCCTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDFFRDS*NFSWYS
Trigger: GGAGTACCAGGAGAAGTTTCAGGAGTCTCTAAAGAA...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGCTCTCAGGCTCCATCTaGTTCTTCCAGGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWLSGSI*FFQDVF
Trigger: GAAAACATCCTGGAAGAATCAGATGGAGCCTGAGAG...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGCTCTCAGGCTCCATCTaGTTCTTCCAGGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQLSGSI*FFQDVF
Trigger: GAAAACATCCTGGAAGAATCAGATGGAGCCTGAGAG...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTCCATTGTTGACCCCTaGCATCGACGCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSSIVDP*HRRSRS
Trigger: GGATCTGGAGCGTCGATGTCAGGGGTCAACAATGGA...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGACTCACTCCTTTCTGTaGCATCACTCACATCCTGCA +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWTHSFL*HHSHPA
Trigger: TGCAGGATGTGAGTGATGTCACAGAAAGGAGTGAGT...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGACTCACTCCTTTCTGTaGCATCACTCACATCCTGCA +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQTHSFL*HHSHPA
Trigger: TGCAGGATGTGAGTGATGTCACAGAAAGGAGTGAGT...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGACTCACTCCTTTCTGTaGCATCACTCACATCCTGCA +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWTHSFL*HHSHPA
Trigger: TGCAGGATGTGAGTGATGTCACAGAAAGGAGTGAGT...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGGAATGTAGGTCCCAGTaGATTGCTGCATACCCCCAG +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKECRSQ*IAAYPQ
Trigger: CTGGGGGTATGCAGCAATTCACTGGGACCTACATTC...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTTTAATGGCAAAATACTaGAAGCGCCCCCTATCCACC +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICLMAKY*KRPLST
Trigger: GGTGGATAGGGGGCGCTTTCAGTATTTTGCCATTAA...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGTTAATGGCAAAATACTaGAAGCGCCCCCTATCCACC +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWLMAKY*KRPLST
Trigger: GGTGGATAGGGGGCGCTTTCAGTATTTTGCCATTAA...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCTTAATGGCAAAATACTaGAAGCGCCCCCTATCCACC +
Preference number: 4 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTALMAKY*KRPLST
Trigger: GGTGGATAGGGGGCGCTTTCAGTATTTTGCCATTAA...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGAGAACTGCTTTCAGCTaGTTCCCAGGGCCCAACACT +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKRTAFS*FPGPNT
Trigger: AGTGTTGGGCCCTGGGAAGCAGCTGAAAGCAGTTCT...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380097.8
CDS-3UTR GCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGACTCTGTCTGGATCCTaGATCTCTCAGGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGTLSGS*ISQAPS
Trigger: AGATGGAGCCTGAGAGATGCAGGATCCAGACAGAGT...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCTTTTTCAGCTCCCGTTaGTCCACTCTGTCTAGGATA +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIFFSSR*STLSRI
Trigger: TATCCTAGACAGAGTGGAGCAACGGGAGCTGAAAAA...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTACATCACTCACATCCTaGAGCAGCTCCATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICTSLTS*SSSIVD
Trigger: GTCAACAATGGAGCTGCTGCAGGATGTGAGTGATGT...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGACATCACTCACATCCTaGAGCAGCTCCATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQTSLTS*SSSIVD
Trigger: GTCAACAATGGAGCTGCTGCAGGATGTGAGTGATGT...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGACATCACTCACATCCTaGAGCAGCTCCATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWTSLTS*SSSIVD
Trigger: GTCAACAATGGAGCTGCTGCAGGATGTGAGTGATGT...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGTCCCAGTGAATTGCTaGATACCCCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSVPVNC*IPPGSR
Trigger: CCTGGATCCTGGGGGTATGCAGCAATTCACTGGGAC...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCACTCTCACCACTGGGTaGATCCTAGTACTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTATLTTG*ILVLSN
Trigger: GTTACTCAGTACTAGGATGCACCCAGTGGTGAGAGT...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGACTCTCACCACTGGGTaGATCCTAGTACTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQTLTTG*ILVLSN
Trigger: GTTACTCAGTACTAGGATGCACCCAGTGGTGAGAGT...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTACTCTCACCACTGGGTaGATCCTAGTACTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICTLTTG*ILVLSN
Trigger: GTTACTCAGTACTAGGATGCACCCAGTGGTGAGAGT...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGCTGCCTGTAGAATCCTaGAATCTGTGGCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGLPVES*NLWPGS
Trigger: TGATCCAGGCCACAGATTCCAGGATTCTACAGGCAG...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380107.5
CDS-3UTR CCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCGCAGCGACTGGGTCTaGTGGACCAGATCATTCTCA +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSRSDWV*WTRSFS
Trigger: TGAGAATGATCTGGTCCACCAGACCCAGTCGCTGCG...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCCATCCTTTTCAGATCTaGGGCTCGGAACATACTTCT +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIHPFQI*GSEHTS
Trigger: AGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATG...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAATATTCAAGAGCTTaGACGACGCAGGGTCATAGG +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWEYSRA*TTQGHR
Trigger: CCTATGACCCTGCGTCGTCCAAGCTCTTGAATATTC...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGGCTTACTCTCACCACTaGGTGCATCCTAGTACTGAG +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGAYSHH*VHPSTE
Trigger: CTCAGTACTAGGATGCACCCAGTGGTGAGAGTAAGC...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCGTACTCAACAGACATTaGTGGCTCCTGGATACCATA +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIVLNRH*WLLDTI
Trigger: TATGGTATCCAGGAGCCACCAATGTCTGTTGAGTAC...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGTGCAGTTTTTCTCCATaGTCTGGAATCTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWCSFSP*SGICGL
Trigger: CAGGCCACAGATTCCAGACCATGGAGAAAAACTGCA...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS-3UTR CCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGTCTCCTCCCCCTGTTTaGAAGGAATATAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWSPPPV*KEYSGG
Trigger: TCCTCCACTATATTCCTTCCAAACAGGGGGAGGAGA...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS-3UTR TCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGCTGCCTGCCCAACCCTaGTTTCTAAGATGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKLPAQP*FLRCFL
Trigger: CAGGAAACATCTTAGAAATCAGGGTTGGGCAGGCAG...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
CDS-3UTR TCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGGTCCACCAGTACTGGTaGAGTCATTGTAGCTACTCT +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGVHQYW*SHCSYS
Trigger: AGAGTAGCTACAATGACTTCACCAGTACTGGTGGAC...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
CDS-3UTR TCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCCCCTGCCATTTGGTGTaGTGCAGGCTTGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPPCHLV*CRLGRS
Trigger: GCTTCTGCCAAGCCTGCATCACACCAAATGGCAGGG...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGTTCTTGACCAATCACTaGTTCCCTGCCATTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWFLTNH*FPAIWC
Trigger: ACACCAAATGGCAGGGAATCAGTGATTGGTCAAGAA...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR TCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGCTTCTTTCCCCTTCTTaGCCAATCACTGATTCCCTG +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGLLSPS*PITDSL
Trigger: CAGGGAATCAGTGATTGGTCAAGAAGGGGAAAGAAG...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR TCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAACTTCTTTCCCCTTCTTaGCCAATCACTGATTCCCTG +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEELLSPS*PITDSL
Trigger: CAGGGAATCAGTGATTGGTCAAGAAGGGGAAAGAAG...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGTTCTTTAGAGACTCCTaGAACTTCTCCTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWFFRDS*NFSWYS
Trigger: GGAGTACCAGGAGAAGTTTCAGGAGTCTCTAAAGAA...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTTTCTTTAGAGACTCCTaGAACTTCTCCTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICFFRDS*NFSWYS
Trigger: GGAGTACCAGGAGAAGTTTCAGGAGTCTCTAAAGAA...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAACTCTCAGGCTCCATCTaGTTCTTCCAGGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEELSGSI*FFQDVF
Trigger: GAAAACATCCTGGAAGAATCAGATGGAGCCTGAGAG...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCAGGATATTTCGCAGCTaGTTAAACTCTGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIRIFRS*LNSVWI
Trigger: GATCCAGACAGAGTTTAATCAGCTGCGAAATATCCT...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCGGAAGCCATGGTTTGTaGCATTATAAAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHIGSHGL*HYKRRQ
Trigger: CTGTCTCCTTTTATAATGTCACAAACCATGGCTTCC...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGACTCTGTCTGGATCCTaGATCTCTCAGGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKTLSGS*ISQAPS
Trigger: AGATGGAGCCTGAGAGATGCAGGATCCAGACAGAGT...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGTTTTTCAGCTCCCGTTaGTCCACTCTGTCTAGGATA +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWFFSSR*STLSRI
Trigger: TATCCTAGACAGAGTGGAGCAACGGGAGCTGAAAAA...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAAACTCTCACCACTGGGTaGATCCTAGTACTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEETLTTG*ILVLSN
Trigger: GTTACTCAGTACTAGGATGCACCCAGTGGTGAGAGT...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGCATCCTTTTCAGATCTaGGGCTCGGAACATACTTCT +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQHPFQI*GSEHTS
Trigger: AGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATG...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATTCTGAGGCTGATACCTaGAGTAAGCACTGTGATTTT +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDSEADT*SKHCDF
Trigger: AAAATCACAGTGCTTACTCCAGGTATCAGCCTCAGA...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAAGAATATTCAAGAGCTTaGACGACGCAGGGTCATAGG +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEEEYSRA*TTQGHR
Trigger: CCTATGACCCTGCGTCGTCCAAGCTCTTGAATATTC...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGGCTTACTCTCACCACTaGGTGCATCCTAGTACTGAG +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKAYSHH*VHPSTE
Trigger: CTCAGTACTAGGATGCACCCAGTGGTGAGAGTAAGC...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGGTACTCAACAGACATTaGTGGCTCCTGGATACCATA +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQVLNRH*WLLDTI
Trigger: TATGGTATCCAGGAGCCACCAATGTCTGTTGAGTAC...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCTGACCCGCACATCTaGGGAATGAGAAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKSDPHI*GMRSQE
Trigger: TTCTTGGCTTCTCATTCCCCAGATGTGCGGGTCAGA...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380097.8
ENST00000445329.5
ENST00000506134.5
CDS-3UTR TCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCTGCCTGCCCAACCCTaGTTTCTAAGATGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSLPAQP*FLRCFL
Trigger: CAGGAAACATCTTAGAAATCAGGGTTGGGCAGGCAG...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
CDS-3UTR TCA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCGTCCACCAGTACTGGTaGAGTCATTGTAGCTACTCT +
Preference number: 4 (lower is better)
Translates to: LFVPAHKESVEKLEEIILVHQYW*SHCSYS
Trigger: AGAGTAGCTACAATGACTTCACCAGTACTGGTGGAC...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380097.8
CDS-3UTR TCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGAGGATATTTCGCAGCTaGTTAAACTCTGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWRIFRS*LNSVWI
Trigger: GATCCAGACAGAGTTTAATCAGCTGCGAAATATCCT...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGGGAAGCCATGGTTTGTaGCATTATAAAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQGSHGL*HYKRRQ
Trigger: CTGTCTCCTTTTATAATGTCACAAACCATGGCTTCC...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGGAAGCCATGGTTTGTaGCATTATAAAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWGSHGL*HYKRRQ
Trigger: CTGTCTCCTTTTATAATGTCACAAACCATGGCTTCC...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCTTAATGGCAAAATACTaGAAGCGCCCCCTATCCACC +
Preference number: 4 (lower is better)
Translates to: LFVPAHKESVEKLEEIILLMAKY*KRPLST
Trigger: GGTGGATAGGGGGCGCTTTCAGTATTTTGCCATTAA...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTAATGGCAAAATACTaGAAGCGCCCCCTATCCACC +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKLMAKY*KRPLST
Trigger: GGTGGATAGGGGGCGCTTTCAGTATTTTGCCATTAA...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp ATTGGTGGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATTGCCATTCTCATCCTTaGTATTTGTTTCTACCCTCA +
Preference number: 4 (lower is better)
Translates to: IGGSWIPYGTASAILILDCHSHP*YLFLPS
Trigger: TGAGGGTAGAAACAAATATCAAGGATGAGAATGGCA...ATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCTCTCCATGGTCTCTCTaGCCCGCACATCTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPSPWSL*PAHLGN
Trigger: ATTCCCCAGATGTGCGGGTCAGAGAGACCATGGAGA...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445329.5
CDS-3UTR GCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCCTCCTGGCTCCTGCCTaGCCAACCCTGATTTCTAAG +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPLLAPA*PTLISK
Trigger: CTTAGAAATCAGGGTTGGGCAGGCAGGAGCCAGGAG...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
CDS-3UTR GCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTTTTTCAGCTCCCGTTaGTCCACTCTGTCTAGGATA +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGFFSSR*STLSRI
Trigger: TATCCTAGACAGAGTGGAGCAACGGGAGCTGAAAAA...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGACATCACTCACATCCTaGAGCAGCTCCATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKTSLTS*SSSIVD
Trigger: GTCAACAATGGAGCTGCTGCAGGATGTGAGTGATGT...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGCATCCTTTTCAGATCTaGGGCTCGGAACATACTTCT +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGHPFQI*GSEHTS
Trigger: AGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATG...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTTCTGAGGCTGATACCTaGAGTAAGCACTGTGATTTT +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICSEADT*SKHCDF
Trigger: AAAATCACAGTGCTTACTCCAGGTATCAGCCTCAGA...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGTCTGAGGCTGATACCTaGAGTAAGCACTGTGATTTT +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWSEADT*SKHCDF
Trigger: AAAATCACAGTGCTTACTCCAGGTATCAGCCTCAGA...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGCTTACTCTCACCACTaGGTGCATCCTAGTACTGAG +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSAYSHH*VHPSTE
Trigger: CTCAGTACTAGGATGCACCCAGTGGTGAGAGTAAGC...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTAGAGTGTGGAAAAGCTaGAAGAAATCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICRVWKS*KKSSSS
Trigger: GGAAGAGGATGATTTCTTCCAGCTTTTCCACACTCT...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGGTACTCAACAGACATTaGTGGCTCCTGGATACCATA +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGVLNRH*WLLDTI
Trigger: TATGGTATCCAGGAGCCACCAATGTCTGTTGAGTAC...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAAGTACTCAACAGACATTaGTGGCTCCTGGATACCATA +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEEVLNRH*WLLDTI
Trigger: TATGGTATCCAGGAGCCACCAATGTCTGTTGAGTAC...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTCTGACCCGCACATCTaGGGAATGAGAAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSSDPHI*GMRSQE
Trigger: TTCTTGGCTTCTCATTCCCCAGATGTGCGGGTCAGA...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380097.8
ENST00000445329.5
ENST00000506134.5
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTTTTTCTCCATGGTCTaGAATCTGTGGCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGFFSMV*NLWPGS
Trigger: TGATCCAGGCCACAGATTCCAGACCATGGAGAAAAA...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS-3UTR TCA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCTTCTTGACCAATCACTaGTTCCCTGCCATTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LFVPAHKESVEKLEEIILFLTNH*FPAIWC
Trigger: ACACCAAATGGCAGGGAATCAGTGATTGGTCAAGAA...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000621176.1
CDS-3UTR TCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTCTTGACCAATCACTaGTTCCCTGCCATTTGGTGT +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKFLTNH*FPAIWC
Trigger: ACACCAAATGGCAGGGAATCAGTGATTGGTCAAGAA...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCTTCTTTCCCCTTCTTaGCCAATCACTGATTCCCTG +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSLLSPS*PITDSL
Trigger: CAGGGAATCAGTGATTGGTCAAGAAGGGGAAAGAAG...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR TCA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCTTCTTTAGAGACTCCTaGAACTTCTCCTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: LFVPAHKESVEKLEEIILFFRDS*NFSWYS
Trigger: GGAGTACCAGGAGAAGTTTCAGGAGTCTCTAAAGAA...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTCTTTAGAGACTCCTaGAACTTCTCCTGGTACTCC +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKFFRDS*NFSWYS
Trigger: GGAGTACCAGGAGAAGTTTCAGGAGTCTCTAAAGAA...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCTCTCAGGCTCCATCTaGTTCTTCCAGGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSLSGSI*FFQDVF
Trigger: GAAAACATCCTGGAAGAATCAGATGGAGCCTGAGAG...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCGAATGTAGGTCCCAGTaGATTGCTGCATACCCCCAG +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPECRSQ*IAAYPQ
Trigger: CTGGGGGTATGCAGCAATTCACTGGGACCTACATTC...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAAGGAAGCCATGGTTTGTaGCATTATAAAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEEGSHGL*HYKRRQ
Trigger: CTGTCTCCTTTTATAATGTCACAAACCATGGCTTCC...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTTTTCAGCTCCCGTTaGTCCACTCTGTCTAGGATA +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKFFSSR*STLSRI
Trigger: TATCCTAGACAGAGTGGAGCAACGGGAGCTGAAAAA...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTACATCACTCACATCCTaGAGCAGCTCCATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSTSLTS*SSSIVD
Trigger: GTCAACAATGGAGCTGCTGCAGGATGTGAGTGATGT...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGCTATATTCATGGTTATaGTGTAACCCAATCACCCAG +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWLYSWL*CNPITQ
Trigger: CTGGGTGATTGGGTTACAGCATAACCATGAATATAG...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp TGTATGAAGTACTCAACAGACATTGGTGGCTCCTGGATACCATATGGGACAGCCCTATATTCATGGTTATaGTGTAACCCAATCACCCAG +
Preference number: 4 (lower is better)
Translates to: CMKYSTDIGGSWIPYGTALYSWL*CNPITQ
Trigger: CTGGGTGATTGGGTTACAGCATAACCATGAATATAG...GGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAGTACTTCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTCTATATTCATGGTTATaGTGTAACCCAATCACCCAG +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICLYSWL*CNPITQ
Trigger: CTGGGTGATTGGGTTACAGCATAACCATGAATATAG...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTACTCTCACCACTGGGTaGATCCTAGTACTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSTLTTG*ILVLSN
Trigger: GTTACTCAGTACTAGGATGCACCCAGTGGTGAGAGT...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCCTGGAATCTGTGGCCTaGATCAGAGCCAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPLESVA*IRAKDL
Trigger: CAAGTCCTTGGCTCTGATCCAGGCCACAGATTCCAG...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380107.5
CDS-3UTR CCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCTGTAGGGAGAGCTTCTaGCTTCCTCAGGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPCRESF*LPQGPE
Trigger: TTCTGGACCCTGAGGAAGCCAGAAGCTCTCCCTACA...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTGGTACTTATCAGAAGTaGGTGGGAACAGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: GSWIPYGTASAILILDICGTYQK*VGTEEY
Trigger: ATATTCTTCTGTTCCCACCCACTTCTGATAAGTACC...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGGGTACTTATCAGAAGTaGGTGGGAACAGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQGTYQK*VGTEEY
Trigger: ATATTCTTCTGTTCCCACCCACTTCTGATAAGTACC...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGGTACTTATCAGAAGTaGGTGGGAACAGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: RRENHMLISLRVLIRSGWGTYQK*VGTEEY
Trigger: ATATTCTTCTGTTCCCACCCACTTCTGATAAGTACC...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTTCTTGACCAATCACTaGTTCCCTGCCATTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSFLTNH*FPAIWC
Trigger: ACACCAAATGGCAGGGAATCAGTGATTGGTCAAGAA...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGAGGATATTTCGCAGCTaGTTAAACTCTGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKRIFRS*LNSVWI
Trigger: GATCCAGACAGAGTTTAATCAGCTGCGAAATATCCT...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCGGAAGCCATGGTTTGTaGCATTATAAAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LFVPAHKESVEKLEEIILGSHGL*HYKRRQ
Trigger: CTGTCTCCTTTTATAATGTCACAAACCATGGCTTCC...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCACTCTGTCTGGATCCTaGATCTCTCAGGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPTLSGS*ISQAPS
Trigger: AGATGGAGCCTGAGAGATGCAGGATCCAGACAGAGT...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTTTTTCAGCTCCCGTTaGTCCACTCTGTCTAGGATA +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSFFSSR*STLSRI
Trigger: TATCCTAGACAGAGTGGAGCAACGGGAGCTGAAAAA...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAACTATATTCATGGTTATaGTGTAACCCAATCACCCAG +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEELYSWL*CNPITQ
Trigger: CTGGGTGATTGGGTTACAGCATAACCATGAATATAG...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGCTATATTCATGGTTATaGTGTAACCCAATCACCCAG +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGLYSWL*CNPITQ
Trigger: CTGGGTGATTGGGTTACAGCATAACCATGAATATAG...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCATCCTTTTCAGATCTaGGGCTCGGAACATACTTCT +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSHPFQI*GSEHTS
Trigger: AGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATG...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCTGAGGCTGATACCTaGAGTAAGCACTGTGATTTT +
Preference number: 4 (lower is better)
Translates to: EDQKGESHADKPQGTYQKSEADT*SKHCDF
Trigger: AAAATCACAGTGCTTACTCCAGGTATCAGCCTCAGA...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCTCTGAGGCTGATACCTaGAGTAAGCACTGTGATTTT +
Preference number: 4 (lower is better)
Translates to: LFVPAHKESVEKLEEIILSEADT*SKHCDF
Trigger: AAAATCACAGTGCTTACTCCAGGTATCAGCCTCAGA...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGGGTACTTATCAGAAGTaGGTGGGAACAGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: IRRENHMLISLRVLIRSGGTYQK*VGTEEY
Trigger: ATATTCTTCTGTTCCCACCCACTTCTGATAAGTACC...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CCA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAAGGTACTTATCAGAAGTaGGTGGGAACAGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: SHADKPQGTYQKWVGTEEGTYQK*VGTEEY
Trigger: ATATTCTTCTGTTCCCACCCACTTCTGATAAGTACC...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTAGGATATTTCGCAGCTaGTTAAACTCTGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSRIFRS*LNSVWI
Trigger: GATCCAGACAGAGTTTAATCAGCTGCGAAATATCCT...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCACTCACTCCTTTCTGTaGCATCACTCACATCCTGCA +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPTHSFL*HHSHPA
Trigger: TGCAGGATGTGAGTGATGTCACAGAAAGGAGTGAGT...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCGAATATTCAAGAGCTTaGACGACGCAGGGTCATAGG +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPEYSRA*TTQGHR
Trigger: CCTATGACCCTGCGTCGTCCAAGCTCTTGAATATTC...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTTGCCATTCTCATCCTTaGTATTTGTTTCTACCCTCA +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSCHSHP*YLFLPS
Trigger: TGAGGGTAGAAACAAATATCAAGGATGAGAATGGCA...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCTATATTCATGGTTATaGTGTAACCCAATCACCCAG +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSLYSWL*CNPITQ
Trigger: CTGGGTGATTGGGTTACAGCATAACCATGAATATAG...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR GCA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTAGAAAAAGTCTCCCTTaGCTTCCAGGATGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KIRRENHMLISLRVLIRSRKSLP*LPGCFL
Trigger: AAGAAAACATCCTGGAAGGCAAGGGAGACTTTTTCT...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS-3UTR CCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCCATCCTTTTCAGATCTaGGGCTCGGAACATACTTCT +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPHPFQI*GSEHTS
Trigger: AGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATG...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCAGGATATTTCGCAGCTaGTTAAACTCTGTCTGGATC +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPRIFRS*LNSVWI
Trigger: GATCCAGACAGAGTTTAATCAGCTGCGAAATATCCT...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR TCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCGGAAGCCATGGTTTGTaGCATTATAAAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPGSHGL*HYKRRQ
Trigger: CTGTCTCCTTTTATAATGTCACAAACCATGGCTTCC...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCTCTGAGGCTGATACCTaGAGTAAGCACTGTGATTTT +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPSEADT*SKHCDF
Trigger: AAAATCACAGTGCTTACTCCAGGTATCAGCCTCAGA...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CCA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCAGAGTGTGGAAAAGCTaGAAGAAATCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPRVWKS*KKSSSS
Trigger: GGAAGAGGATGATTTCTTCCAGCTTTTCCACACTCT...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS CCA 90 bp CGTTCCGTTCCGAGAAAGGCAGGGGATCCCTCCTCCGCCAGCCTTTaGCCGTTGAACGGACGGACCCACAGGTCAGGAGTTTGCGGAAGG +
Preference number: 5 (lower is better)
Translates to: RSVPRKAGDPSSASL*PLNGRTHRSGVCGR
Trigger: CCTTCCGCAAACTCCTGACCTGTGGGTCCGTCCGTTCAACGGCCAAAGGCTGGCGGAGGAGGGATCCCCTGCCTTTCTCGGAACGGAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380097.8
ENST00000511284.5
CDS TCA 90 bp TTCCGAGAAAGGCAGGGGATCCCTCCTCCGCCAGCCTTTGGCCGTTaGACGGACGGACCCACAGGTCAGGAGTTTGCGGAAGGCTCATCT +
Preference number: 5 (lower is better)
Translates to: FRERQGIPPPPAFGR*TDGPTGQEFAEGSS
Trigger: AGATGAGCCTTCCGCAAACTCCTGACCTGTGGGTCCGTCCGTTCAACGGCCAAAGGCTGGCGGAGGAGGGATCCCCTGCCTTTCTCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380097.8
CDS GCA 90 bp AGCGCGCTCACTCGGCTTTTATCTAAACTCAACCACGCACGACTCTaGTCCGTTCCGTTCCGAGAAAGGCAGGGGATCCCTCCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: SALTRLLSKLNHARL*SVPFRERQGIPPPP
Trigger: TGGCGGAGGAGGGATCCCCTGCCTTTCTCGGAACGGAACGGAGCAGAGTCGTGCGTGGTTGAGTTTAGATAAAAGCCGAGTGAGCGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380097.8
ENST00000511284.5
CDS-3UTR CAA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGTGTAATCCCAGCACTTaGGGAGACCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: RRENHMLISLRVLIRSGWCNPST*GDRGGW
Trigger: CCACCCGCCTCGGTCTCCCAAAGTGCTGGGATTACA...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCCTCCTCCGCCAGCCTTaGGCCGTTGAACGGACGGAC +
Preference number: 5 (lower is better)
Translates to: LFVPAHKESVEKLEEIILLLRQP*AVERTD
Trigger: GTCCGTCCGTTCAACGGCCAAAGGCTGGCGGAGGAG...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380097.8
CDS TCA 90 bp AGACAGGACAAGGACTCCTTTGCCCTCAGCTCCTATGACCTGCCATaGTTCCTGCCCCAGGACATCTTCAGAAAAAGTCTCCCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: RQDKDSFALSSYDLP*FLPQDIFRKSLPCL
Trigger: AAGGCAAGGGAGACTTTTTCTGAAGATGTCCTGGGGCAGGAATCATGGCAGGTCATAGGAGCTGAGGGCAAAGGAGTCCTTGTCCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS GCA 90 bp AGGACAGACAGGACAAGGACTCCTTTGCCCTCAGCTCCTATGACCTaGCATGATTCCTGCCCCAGGACATCTTCAGAAAAAGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: RTDRTRTPLPSAPMT*HDSCPRTSSEKVSL
Trigger: AAGGGAGACTTTTTCTGAAGATGTCCTGGGGCAGGAATCATGGCAGGTCATAGGAGCTGAGGGCAAAGGAGTCCTTGTCCTGTCTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS-3UTR CAA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGATCAGAGCCAAGGACTaGAAGCAGCCGCGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWIRAKD*KQPRPP
Trigger: TGGAGGACGCGGCTGCTTCAAGTCCTTGGCTCTGAT...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278302.9
CDS-3UTR CAA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGTAATCCCAGCACTTaGGGAGACCGAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: IRRENHMLISLRVLIRSGCNPST*GDRGGW
Trigger: CCACCCGCCTCGGTCTCCCAAAGTGCTGGGATTACA...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS TCA 90 bp ATCAGAGGACAGACAGGACAAGGACTCCTTTGCCCTCAGCTCCTATaGCCTGCCATGATTCCTGCCCCAGGACATCTTCAGAAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: IRGQTGQGLLCPQLL*PAMIPAPGHLQKKS
Trigger: AGACTTTTTCTGAAGATGTCCTGGGGCAGGAATCATGGCAGGTCATAGGAGCTGAGGGCAAAGGAGTCCTTGTCCTGTCTGTCCTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS CCA 90 bp ATCTGGGGCTCGGAACATACTTCTCAGCTTTGTAGGGAGAGCTTCTaGCTTCCTCAGGGTCCAGAACTCACTCCTTTCTGTGACATCACT +
Preference number: 5 (lower is better)
Translates to: IWGSEHTSQLCRESF*LPQGPELTPFCDIT
Trigger: AGTGATGTCACAGAAAGGAGTGAGTTCTGGACCCTGAGGAAGCCAGAAGCTCTCCCTACAAAGCTGAGAAGTATGTTCCGAGCCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000469187.5
ENST00000481603.1
ENST00000506134.5
ENST00000507320.5
ENST00000511284.5
ENST00000515022.5
ENST00000621176.1
CDS CCA 90 bp GACATCTGTCAGCTCTCTACACACTCGCAGCATCCTTTTCAGATCTaGGGCTCGGAACATACTTCTCAGCTTTGTAGGGAGAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: DICQLSTHSQHPFQI*GSEHTSQLCRESFW
Trigger: CCAGAAGCTCTCCCTACAAAGCTGAGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATGCTGCGAGTGTGTAGAGAGCTGACAGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000469187.5
ENST00000506134.5
ENST00000507320.5
ENST00000511284.5
ENST00000515022.5
ENST00000621176.1
CDS CCA 90 bp CCATTTCATCTCCCCTCTACACACTCGCAGCATCCTTTTCAGATCTaGGGCTCGGAACATACTTCTCAGCTTTGTAGGGAGAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PFHLPSTHSQHPFQI*GSEHTSQLCRESFW
Trigger: CCAGAAGCTCTCCCTACAAAGCTGAGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATGCTGCGAGTGTGTAGAGGGGAGATGAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481603.1
CDS-3UTR CAA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGGTAGGTCCCAGTGAATaGCTGCATACCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWVGPSE*LHTPRI
Trigger: GATCCTGGGGGTATGCAGCAATTCACTGGGACCTAC...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GGCTCCTGGATACCATATGGGACAGCCAGTGCCATTCTCATCCTTGATATTTGTGTAGGTCCCAGTGAATaGCTGCATACCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: GSWIPYGTASAILILDICVGPSE*LHTPRI
Trigger: GATCCTGGGGGTATGCAGCAATTCACTGGGACCTAC...ACAAATATCAAGGATGAGAATGGCACTGGCTGTCCCATATGGTATCCAGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGGTAGGTCCCAGTGAATaGCTGCATACCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQVGPSE*LHTPRI
Trigger: GATCCTGGGGGTATGCAGCAATTCACTGGGACCTAC...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CAA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGTAGGTCCCAGTGAATaGCTGCATACCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: RRENHMLISLRVLIRSGWVGPSE*LHTPRI
Trigger: GATCCTGGGGGTATGCAGCAATTCACTGGGACCTAC...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CAA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGCCACAGGTCAGGAGTTaGCGGAAGGCTCATCTCCCA +
Preference number: 5 (lower is better)
Translates to: IRRENHMLISLRVLIRSGPQVRS*RKAHLP
Trigger: TGGGAGATGAGCCTTCCGCAAACTCCTGACCTGTGG...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380097.8
CDS-3UTR CAA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAGGACAAGGACTCCTTaGCCCTCAGCTCCTATGACC +
Preference number: 5 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQRTRTP*PSAPMT
Trigger: GGTCATAGGAGCTGAGGGCAAAGGAGTCCTTGTCCT...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS GCA 90 bp ACCAGTACTGGTGAAGTCATTGTAGCTACTCTCCTGGCTCCTGCCTaGCCAACCCTGATTTCTAAGATGTTTCCTGCCTGTAGAATCCTG +
Preference number: 5 (lower is better)
Translates to: TSTGEVIVATLLAPA*PTLISKMFPACRIL
Trigger: CAGGATTCTACAGGCAGGAAACATCTTAGAAATCAGGGTTGGGCAGGCAGGAGCCAGGAGAGTAGCTACAATGACTTCACCAGTACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000380107.5
CDS GCA 90 bp ACCAGTACTGGTGAAGTCATTGTAGCTACTCTCCTGGCTCCTGCCTaGCCAACCCTGATTTCTAAGATGTTTCCTGCCTGTAGAATCCTC +
Preference number: 5 (lower is better)
Translates to: TSTGEVIVATLLAPA*PTLISKMFPACRIL
Trigger: GAGGATTCTACAGGCAGGAAACATCTTAGAAATCAGGGTTGGGCAGGCAGGAGCCAGGAGAGTAGCTACAATGACTTCACCAGTACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380097.8
CDS-3UTR CAA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGATCAGAGCCAAGGACTaGAAGCAGCCGCGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: EDQKGESHADKPQGTYQKIRAKD*KQPRPP
Trigger: TGGAGGACGCGGCTGCTTCAAGTCCTTGGCTCTGAT...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278302.9
ENST00000507320.5
CDS-3UTR CAA 90 bp ATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGGTAGGTCCCAGTGAATaGCTGCATACCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: IRRENHMLISLRVLIRSGVGPSE*LHTPRI
Trigger: GATCCTGGGGGTATGCAGCAATTCACTGGGACCTAC...CCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCGCCAGCCTTTGGCCGTaGAACGGACGGACCCACAGG +
Preference number: 5 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPASLWP*NGRTHR
Trigger: CCTGTGGGTCCGTCCGTTCAACGGCCAAAGGCTGGC...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380097.8
CDS-3UTR CAA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGTCCCACAAACCTCACTaGTCTCCGGTTTTTAGCCAG +
Preference number: 5 (lower is better)
Translates to: RRENHMLISLRVLIRSGWSHKPH*SPVFSQ
Trigger: CTGGCTAAAAACCGGAGACAAGTGAGGTTTGTGGGA...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGGTAGGTCCCAGTGAATaGCTGCATACCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: EDQKGESHADKPQGTYQKVGPSE*LHTPRI
Trigger: GATCCTGGGGGTATGCAGCAATTCACTGGGACCTAC...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS CCA 90 bp AAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTaGGTGGGAACAGAAGAATATTCAAGAGCTTGGACGACGCAGGGT +
Preference number: 5 (lower is better)
Translates to: KGESHADKPQGTYQK*VGTEEYSRAWTTQG
Trigger: ACCCTGCGTCGTCCAAGCTCTTGAATATTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000481603.1
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CAA 90 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGAATCCCACAAACCTCACTaGTCTCCGGTTTTTAGCCAG +
Preference number: 5 (lower is better)
Translates to: SHADKPQGTYQKWVGTEESHKPH*SPVFSQ
Trigger: CTGGCTAAAAACCGGAGACAAGTGAGGTTTGTGGGA...TTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CAA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGTAGGTCCCAGTGAATaGCTGCATACCCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: KIRRENHMLISLRVLIRSVGPSE*LHTPRI
Trigger: GATCCTGGGGGTATGCAGCAATTCACTGGGACCTAC...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GTACTGAGTAACTGTTTAAAACGAAAGAACTGTCTGGGCGCGGCGGCTCACATCTCACTCAACAGCTGTTaGTTCCTGCGCATAAAGAGA +
Preference number: 5 (lower is better)
Translates to: VLSNCLKRKNCLGAAAHISLNSC*FLRIKR
Trigger: TCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGA...GATGTGAGCCGCCGCGCCCAGACAGTTCTTTCGTTTTAAACAGTTACTCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGTCACTCAACAGCTGTTaGTTCCTGCGCATAAAGAGA +
Preference number: 5 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQSLNSC*FLRIKR
Trigger: TCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGA...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGCAGAACTTCCTAAATTaGATCCCCTGCATCAATCAA +
Preference number: 5 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQQNFLN*IPCINQ
Trigger: TTGATTGATGCAGGGGATCAAATTTAGGAAGTTCTG...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp CTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAAAGCTGGAAGAAATCATCCTCTCACTCAACAGCTGTTaGTTCCTGCGCATAAAGAGA +
Preference number: 5 (lower is better)
Translates to: LFVPAHKESVEKLEEIILSLNSC*FLRIKR
Trigger: TCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGA...GAGGATGATTTCTTCCAGCTTTTCCACACTCTCTTTATGCGCAGGAACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGCAGAAAAAGTCTCCCTaGCCTTCCAGGATGTTTTCT +
Preference number: 5 (lower is better)
Translates to: EDQKGESHADKPQGTYQKQKKSP*PSRMFS
Trigger: AGAAAACATCCTGGAAGGCAAGGGAGACTTTTTCTG...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS-3UTR CAA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCTCCCACAAACCTCACTaGTCTCCGGTTTTTAGCCAG +
Preference number: 5 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPSHKPH*SPVFSQ
Trigger: CTGGCTAAAAACCGGAGACAAGTGAGGTTTGTGGGA...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp AGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGAAGACTCTCTTCAATTaGAGTTTGAAGCTACCCAAA +
Preference number: 5 (lower is better)
Translates to: RRENHMLISLRVLIRSGWKTLFN*SLKLPK
Trigger: TTTGGGTAGCTTCAAACTCAAATTGAAGAGAGTCTT...CCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTGGGTGGGAACAGAAGACTCTCTTCAATTaGAGTTTGAAGCTACCCAAA +
Preference number: 5 (lower is better)
Translates to: ENHMLISLRVLIRSGWEQKTLFN*SLKLPK
Trigger: TTTGGGTAGCTTCAAACTCAAATTGAAGAGAGTCTT...CTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp AGTCATAGCAGCTCACTCAACAGCTGTTTGTTCCTGCGCATAAAGAGAGTGTGGAAGACTCTCTTCAATTaGAGTTTGAAGCTACCCAAA +
Preference number: 5 (lower is better)
Translates to: SHSSSLNSCLFLRIKRVWKTLFN*SLKLPK
Trigger: TTTGGGTAGCTTCAAACTCAAATTGAAGAGAGTCTT...CCACACTCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGAGCTGCTATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GAAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGCAGAACTTCCTAAATTaGATCCCCTGCATCAATCAA +
Preference number: 5 (lower is better)
Translates to: EDQKGESHADKPQGTYQKQNFLN*IPCINQ
Trigger: TTGATTGATGCAGGGGATCAAATTTAGGAAGTTCTG...CTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp AAGATCAGAAGGGAGAATCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTCAGAACTTCCTAAATTaGATCCCCTGCATCAATCAA +
Preference number: 5 (lower is better)
Translates to: KIRRENHMLISLRVLIRSQNFLN*IPCINQ
Trigger: TTGATTGATGCAGGGGATCAAATTTAGGAAGTTCTG...ACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGATTCTCCCTTCTGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCTCACTCAACAGCTGTTaGTTCCTGCGCATAAAGAGA +
Preference number: 5 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPSLNSC*FLRIKR
Trigger: TCTCTTTATGCGCAGGAACAAACAGCTGTTGAGTGA...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000445329.5
ENST00000621176.1
CDS-3UTR CAA 90 bp GTTGTAGTGAAGATTGTAGTGAAGACTCTCTTCAATTTGAGTTTGAAGCTACCCAAGACTCTCTTCAATTaGAGTTTGAAGCTACCCAAA +
Preference number: 5 (lower is better)
Translates to: VVVKIVVKTLFNLSLKLPKTLFN*SLKLPK
Trigger: TTTGGGTAGCTTCAAACTCAAATTGAAGAGAGTCTT...GGGTAGCTTCAAACTCAAATTGAAGAGAGTCTTCACTACAATCTTCACTACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000621176.1
CDS TCA 72 bp AGGCAGGGGATCCCTCCTCCGCCAGCCTTTGGCCGTTaGACGGACGGACCCACAGGTCAGGAGTTTGCGGAA +
Preference number: 6 (lower is better)
Translates to: RQGIPPPPAFGR*TDGPTGQEFAE
Trigger: TTCCGCAAACTCCTGACCTGTGGGTCCGTCCGTTCAACGGCCAAAGGCTGGCGGAGGAGGGATCCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380097.8
ENST00000511284.5
CDS CCA 72 bp CCGAGAAAGGCAGGGGATCCCTCCTCCGCCAGCCTTTaGCCGTTGAACGGACGGACCCACAGGTCAGGAGTT +
Preference number: 6 (lower is better)
Translates to: PRKAGDPSSASL*PLNGRTHRSGV
Trigger: AACTCCTGACCTGTGGGTCCGTCCGTTCAACGGCCAAAGGCTGGCGGAGGAGGGATCCCCTGCCTTTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380097.8
ENST00000511284.5
CDS CAA 72 bp AAGGCAGGGGATCCCTCCTCCGCCAGCCTTTGGCCGTaGAACGGACGGACCCACAGGTCAGGAGTTTGCGGA +
Preference number: 6 (lower is better)
Translates to: KAGDPSSASLWP*NGRTHRSGVCG
Trigger: TCCGCAAACTCCTGACCTGTGGGTCCGTCCGTTCAACGGCCAAAGGCTGGCGGAGGAGGGATCCCCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380097.8
ENST00000511284.5
CDS CAA 90 bp GTTCCGAGAAAGGCAGGGGATCCCTCCTCCGCCAGCCTTTGGCCGTaGAACGGACGGACCCACAGGTCAGGAGTTTGCGGAAGGCTCATC +
Preference number: 6 (lower is better)
Translates to: VPRKAGDPSSASLWP*NGRTHRSGVCGRLI
Trigger: GATGAGCCTTCCGCAAACTCCTGACCTGTGGGTCCGTCCGTTCAACGGCCAAAGGCTGGCGGAGGAGGGATCCCCTGCCTTTCTCGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380097.8
CDS CAA 72 bp GGTCTGGAATCTGTGGCCTGGATCAGAGCCAAGGACTaGAAGCAGCCGCGTCCTCCACCCAGGCCGAAAGAC +
Preference number: 6 (lower is better)
Translates to: GLESVAWIRAKD*KQPRPPPRPKD
Trigger: GTCTTTCGGCCTGGGTGGAGGACGCGGCTGCTTCAAGTCCTTGGCTCTGATCCAGGCCACAGATTCCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS TCA 72 bp CAGACAGGACAAGGACTCCTTTGCCCTCAGCTCCTATaGCCTGCCATGATTCCTGCCCCAGGACATCTTCAG +
Preference number: 6 (lower is better)
Translates to: QTGQGLLCPQLL*PAMIPAPGHLQ
Trigger: CTGAAGATGTCCTGGGGCAGGAATCATGGCAGGTCATAGGAGCTGAGGGCAAAGGAGTCCTTGTCCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS GCA 72 bp ACTCGGCTTTTATCTAAACTCAACCACGCACGACTCTaGTCCGTTCCGTTCCGAGAAAGGCAGGGGATCCCT +
Preference number: 6 (lower is better)
Translates to: TRLLSKLNHARL*SVPFRERQGIP
Trigger: AGGGATCCCCTGCCTTTCTCGGAACGGAACGGAGCAGAGTCGTGCGTGGTTGAGTTTAGATAAAAGCCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380097.8
ENST00000511284.5
CDS GCA 72 bp CCTTTGCCCTCAGCTCCTATGACCTGCCATGATTCCTaGCCCAGGACATCTTCAGAAAAAGTCTCCCTTGCC +
Preference number: 6 (lower is better)
Translates to: PLPSAPMTCHDS*PRTSSEKVSLA
Trigger: GGCAAGGGAGACTTTTTCTGAAGATGTCCTGGGGCAGGAATCATGGCAGGTCATAGGAGCTGAGGGCAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS CCA 72 bp CTCCCCTCTACACACTCGCAGCATCCTTTTCAGATCTaGGGCTCGGAACATACTTCTCAGCTTTGTAGGGAG +
Preference number: 6 (lower is better)
Translates to: LPSTHSQHPFQI*GSEHTSQLCRE
Trigger: CTCCCTACAAAGCTGAGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATGCTGCGAGTGTGTAGAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481603.1
CDS GCA 72 bp AGGACAAGGACTCCTTTGCCCTCAGCTCCTATGACCTaGCATGATTCCTGCCCCAGGACATCTTCAGAAAAA +
Preference number: 6 (lower is better)
Translates to: RTRTPLPSAPMT*HDSCPRTSSEK
Trigger: TTTTTCTGAAGATGTCCTGGGGCAGGAATCATGGCAGGTCATAGGAGCTGAGGGCAAAGGAGTCCTTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507320.5
CDS CCA 72 bp CAGCTCTCTACACACTCGCAGCATCCTTTTCAGATCTaGGGCTCGGAACATACTTCTCAGCTTTGTAGGGAG +
Preference number: 6 (lower is better)
Translates to: QLSTHSQHPFQI*GSEHTSQLCRE
Trigger: CTCCCTACAAAGCTGAGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATGCTGCGAGTGTGTAGAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000469187.5
ENST00000506134.5
ENST00000507320.5
ENST00000511284.5
ENST00000515022.5
ENST00000621176.1
CDS TCA 72 bp TCCCGTTGCTCCACTCTGTCTAGGATATTTCGCAGCTaGTTAAACTCTGTCTGGATCCTGCATCTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: SRCSTLSRIFRS*LNSVWILHLSG
Trigger: GCCTGAGAGATGCAGGATCCAGACAGAGTTTAATCAGCTGCGAAATATCCTAGACAGAGTGGAGCAACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000424369.5
ENST00000445329.5
ENST00000469187.5
ENST00000506134.5
ENST00000507320.5
ENST00000515022.5
ENST00000621176.1
CDS CCA 72 bp TCGGAACATACTTCTCAGCTTTGTAGGGAGAGCTTCTaGCTTCCTCAGGGTCCAGAACTCACTCCTTTCTGT +
Preference number: 6 (lower is better)
Translates to: SEHTSQLCRESF*LPQGPELTPFC
Trigger: ACAGAAAGGAGTGAGTTCTGGACCCTGAGGAAGCCAGAAGCTCTCCCTACAAAGCTGAGAAGTATGTTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000469187.5
ENST00000481603.1
ENST00000506134.5
ENST00000507320.5
ENST00000511284.5
ENST00000515022.5
ENST00000621176.1
CDS CCA 72 bp AGACTCCTGAAACTTCTCCTCTCTGACCCGCACATCTaGGGAATGAGAAGCCAAGAAGTTCCAGATGTAAGC +
Preference number: 6 (lower is better)
Translates to: RLLKLLLSDPHI*GMRSQEVPDVS
Trigger: GCTTACATCTGGAACTTCTTGGCTTCTCATTCCCCAGATGTGCGGGTCAGAGAGGAGAAGTTTCAGGAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506134.5
CDS CCA 72 bp TGTGACATCACTCACATCCTCTCTGACCCGCACATCTaGGGAATGAGAAGCCAAGAAGTTCCAGATGTAAGC +
Preference number: 6 (lower is better)
Translates to: CDITHILSDPHI*GMRSQEVPDVS
Trigger: GCTTACATCTGGAACTTCTTGGCTTCTCATTCCCCAGATGTGCGGGTCAGAGAGGATGTGAGTGATGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511284.5
CDS CCA 72 bp CAGAAGTGGGTGGGAACAGAAGAATATTCAAGAGCTTaGACGACGCAGGGTCATAGGAATTACACAGTTGCA +
Preference number: 6 (lower is better)
Translates to: QKWVGTEEYSRA*TTQGHRNYTVA
Trigger: TGCAACTGTGTAATTCCTATGACCCTGCGTCGTCCAAGCTCTTGAATATTCTTCTGTTCCCACCCACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000481603.1
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1
CDS CCA 72 bp TCACATGCTGATAAGCCTCAGGGTACTTATCAGAAGTaGGTGGGAACAGAAGAATATTCAAGAGCTTGGACG +
Preference number: 6 (lower is better)
Translates to: SHADKPQGTYQK*VGTEEYSRAWT
Trigger: CGTCCAAGCTCTTGAATATTCTTCTGTTCCCACCCACTTCTGATAAGTACCCTGAGGCTTATCAGCATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278302.9
ENST00000380097.8
ENST00000380107.5
ENST00000445329.5
ENST00000481603.1
ENST00000506134.5
ENST00000507320.5
ENST00000621176.1