RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM58 (Homo sapiens)

Ensembl gene IDs: ENSG00000162722

Ensembl transcript IDs: ENST00000366481.4

Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCAAGCAGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTaGCTGCTTTGGTGGAAACCCAGCCATGAGGCCAGGGCAGCTGGA +
Preference number: 1 (lower is better)
Translates to: VKQKPQAGKWPCDGK*LLWWKPSHEARAAG
Trigger: TCCAGCTGCCCTGGCCTCATGGCTGGGTTTCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCTGCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 90 bp AAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTaGTGGAAACCCAGCCATGAGGCCAGGGCAGCTGGAGCAGAATGC +
Preference number: 1 (lower is better)
Translates to: KPQAGKWPCDGKCLL*WKPSHEARAAGAEC
Trigger: GCATTCTGCTCCAGCTGCCCTGGCCTCATGGCTGGGTTTCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 90 bp ACCTTCCCTACACAGACCTTGCATGAACGAGGGCTAGGGCACACATaGCCTGTGGAACACCAAGAAGAGGGACACGAGGATGCGTTATTT +
Preference number: 1 (lower is better)
Translates to: TFPTQTLHERGLGHT*PVEHQEEGHEDALF
Trigger: AAATAACGCATCCTCGTGTCCCTCTTCTTGGTGTTCCACAGGCCATGTGTGCCCTAGCCCTCGTTCATGCAAGGTCTGTGTAGGGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 90 bp CAGGATTCAGCAGAGACAGTGAGACCAGAGTACTGGGCTACACAGTaGGAAATGGATACTCCTGGGACTGGGACACTCATTCCATCCTAT +
Preference number: 1 (lower is better)
Translates to: QDSAETVRPEYWATQ*EMDTPGTGTLIPSY
Trigger: ATAGGATGGAATGAGTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTCTCACTGTCTCTGCTGAATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 90 bp CTGAAGGTAGGACCAACAGGGCTTGCCGATGGACTGGATGTGGGCTaGAGAAATCAAGAAAGTACTCAATCGGATGCCTGGCTTAAGCAA +
Preference number: 1 (lower is better)
Translates to: LKVGPTGLADGLDVG*RNQESTQSDAWLKQ
Trigger: TTGCTTAAGCCAGGCATCCGATTGAGTACTTTCTTGATTTCTCCAGCCCACATCCAGTCCATCGGCAAGCCCTGTTGGTCCTACCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 90 bp GAACCCCGGACATATTCTGAAGGTAGGACCAACAGGGCTTGCCGATaGACTGGATGTGGGCTGGAGAAATCAAGAAAGTACTCAATCGGA +
Preference number: 1 (lower is better)
Translates to: EPRTYSEGRTNRACR*TGCGLEKSRKYSIG
Trigger: TCCGATTGAGTACTTTCTTGATTTCTCCAGCCCACATCCAGTCCATCGGCAAGCCCTGTTGGTCCTACCTTCAGAATATGTCCGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR GCA 90 bp AGGGCACACATGGCCTGTGGAACACCAAGAAGAGGGACACGAGGATaGGTTATTTCCTCTGTTTGCAAATCTATCACAGAGAGTAGAAGT +
Preference number: 1 (lower is better)
Translates to: RAHMACGTPRRGTRG*VISSVCKSITESRS
Trigger: ACTTCTACTCTCTGTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGTGTTCCACAGGCCATGTGTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 90 bp CTGGATGTGGGCTGGAGAAATCAAGAAAGTACTCAATCGGATGCCTaGCTTAAGCAATCAAAAGAATGGAGTTGCCATCCAGTGACAGGG +
Preference number: 1 (lower is better)
Translates to: LDVGWRNQESTQSDA*LKQSKEWSCHPVTG
Trigger: CCCTGTCACTGGATGGCAACTCCATTCTTTTGATTGCTTAAGCCAGGCATCCGATTGAGTACTTTCTTGATTTCTCCAGCCCACATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR TCA 90 bp TACAGATTGAATGATAACCACATACAAACCAGCATTGGGGGTGCTTaGGAAACATTGAATGTATCATTGTCAACAGACAAAGATACCTCC +
Preference number: 1 (lower is better)
Translates to: YRLNDNHIQTSIGGA*ETLNVSLSTDKDTS
Trigger: GGAGGTATCTTTGTCTGTTGACAATGATACATTCAATGTTTCTCAAGCACCCCCAATGCTGGTTTGTATGTGGTTATCATTCAATCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR TCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGGGAGTTGCCATCCAGTaGCAGGGAGAAGCCTGTGGT +
Preference number: 2 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGGVAIQ*QGEACG
Trigger: ACCACAGGCTTCTCCCTGTCACTGGATGGCAACTCC...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR TCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGTGGCCAGGCTGGTCTTaGACTCCTGAGCTTGTGATC +
Preference number: 2 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGWPGWS*TPELVI
Trigger: GATCACAAGCTCAGGAGTTCAAGACCAGCCTGGCCA...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGGGCTTGCCGATGGACTaGATGTGGGCTGGAGAAATC +
Preference number: 2 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGGLPMD*MWAGEI
Trigger: GATTTCTCCAGCCCACATCCAGTCCATCGGCAAGCC...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR TCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGATGCTGTTGCTGAGCTaGAGTCCACCTTCCCTACAC +
Preference number: 2 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGMLLLS*SPPSLH
Trigger: GTGTAGGGAAGGTGGACTTCAGCTCAGCAACAGCAT...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR GCA 90 bp CCCGTCTCACTGAATGGGTGGTGCCCCATGGAAGGGGTATCTCAAGCCACCCACGAGATATTGGCTCACTaGAACCTCCGCCTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: PVSLNGWCPMEGVSQATHEILAH*NLRLQG
Trigger: ACCCTGGAGGCGGAGGTTGCAGTGAGCCAATATCTC...GTGGGTGGCTTGAGATACCCCTTCCATGGGGCACCACCCATTCAGTGAGACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp CCCGTCTCACTGAATGGGTGGTGCCCCATGGAAGGGGTATCTCAAGCCACCCACGGCACACATGGCCTGTaGAACACCAAGAAGAGGGAC +
Preference number: 2 (lower is better)
Translates to: PVSLNGWCPMEGVSQATHGTHGL*NTKKRD
Trigger: GTCCCTCTTCTTGGTGTTCCACAGGCCATGTGTGCC...GTGGGTGGCTTGAGATACCCCTTCCATGGGGCACCACCCATTCAGTGAGACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR GCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGAGGAATCAGCCCAGCTaGTGTAGAGAGAATGGGAGT +
Preference number: 2 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGRNQPS*CRENGS
Trigger: ACTCCCATTCTCTCTACAGCAGCTGGGCTGATTCCT...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGCTACACAGTGGGAAATaGATACTCCTGGGACTGGGA +
Preference number: 2 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGLHSGK*ILLGLG
Trigger: TCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAG...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CAA 90 bp AGGGATGCTGTTGCTGAGCTGAAGTCCACCTTCCCTACACAGACCTaGCATGAACGAGGGCTAGGGCACACATGGCCTGTGGAACACCAA +
Preference number: 2 (lower is better)
Translates to: RDAVAELKSTFPTQT*HERGLGHTWPVEHQ
Trigger: TTGGTGTTCCACAGGCCATGTGTGCCCTAGCCCTCGTTCATGCAAGGTCTGTGTAGGGAAGGTGGACTTCAGCTCAGCAACAGCATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGAGTGAGACCAGAGTACTaGGCTACACAGTGGGAAATG +
Preference number: 2 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGVRPEY*ATQWEM
Trigger: CATTTCCCACTGTGTAGCCCAGTACTCTGGTCTCAC...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGGGACTGGATGTGGGCTaGAGAAATCAAGAAAGTACT +
Preference number: 2 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGGLDVG*RNQEST
Trigger: AGTACTTTCTTGATTTCTCCAGCCCACATCCAGTCC...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR TCA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATATACACAGACCTTGCATaGACGAGGGCTAGGGCACAC +
Preference number: 2 (lower is better)
Translates to: EWKGLEPKQDHCEETKVIYTDLA*TRARAH
Trigger: GTGTGCCCTAGCCCTCGTTCATGCAAGGTCTGTGTA...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAACAGTGGTGAGATATTaGCTCACTGCAACCTCCGCC +
Preference number: 2 (lower is better)
Translates to: EWKGLEPKQDHCEETKVITVVRY*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAATATCTCACCACTGT...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATATCCAGAGGGGCAGGATaGAGTTCTGACCATGGTTAC +
Preference number: 2 (lower is better)
Translates to: EWKGLEPKQDHCEETKVISRGAG*SSDHGY
Trigger: GTAACCATGGTCAGAACTCCATCCTGCCCCTCTGGA...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAGGAAATGGATACTCCTaGGACTGGGACACTCATTCC +
Preference number: 2 (lower is better)
Translates to: EWKGLEPKQDHCEETKVIGNGYS*DWDTHS
Trigger: GGAATGAGTGTCCCAGTCCCAGGAGTATCCATTTCC...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR TCA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGATTTACCATAACACAGTaGGGCCAGTATAATTGTTCC +
Preference number: 2 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGFTITQ*GQYNCS
Trigger: GGAACAATTATACTGGCCTCACTGTGTTATGGTAAA...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGTTGGGGAGAAATTTGTaGGTAAGTTTTAGGCAAATT +
Preference number: 2 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGLGRNL*VSFRQI
Trigger: AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAA...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR TCA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGAACAGAATTAAGGAGGTaGTACTGGAATAGTATCAGA +
Preference number: 2 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGTELRR*YWNSIR
Trigger: TCTGATACTATTCCAGTATCACCTCCTTAATTCTGT...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACCCCTCTTTTGTCCCATaGACATATTTCACAGCAACA +
Preference number: 2 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHPSFVP*TYFTAT
Trigger: TGTTGCTGTGAAATATGTCCATGGGACAAAAGAGGG...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CAA 90 bp GAATGGAGTTGCCATCCAGTGACAGGGAGAAGCCTGTGGTTTTTGTaGTTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGT +
Preference number: 2 (lower is better)
Translates to: EWSCHPVTGRSLWFL*LQLGRDLGRNLWVS
Trigger: ACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAACAACAAAAACCACAGGCTTCTCCCTGTCACTGGATGGCAACTCCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR TCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGGCTTCCCCGTCTCACTaGATGGGTGGTGCCCCATGG +
Preference number: 2 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLASPSH*MGGAPW
Trigger: CCATGGGGCACCACCCATTCAGTGAGACGGGGAAGC...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp ACCAAGAAGAGGGACACGAGGATGCGTTATTTCCTCTGTTTGCAAATCTATCACCACCTCCAGAATAGCTaGGATTACAGGCTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: TKKRDTRMRYFLCLQIYHHLQNS*DYRLLP
Trigger: TGGCAGGAGCCTGTAATCCCAGCTATTCTGGAGGTG...GTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp ACCAAGAAGAGGGACACGAGGATGCGTTATTTCCTCTGTTTGCAAATCTATCACACAAGCTCTGCCTCCTaGGTTCATGCCATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: TKKRDTRMRYFLCLQIYHTSSAS*VHAILL
Trigger: CAGGAGAATGGCATGAACCCAGGAGGCAGAGCTTGT...GTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CAA 90 bp TGGAGTTGCCATCCAGTGACAGGGAGAAGCCTGTGGTTTTTGTTGTaGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTT +
Preference number: 2 (lower is better)
Translates to: WSCHPVTGRSLWFLL*QLGRDLGRNLWVSF
Trigger: AAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAACAACAAAAACCACAGGCTTCTCCCTGTCACTGGATGGCAACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CAA 90 bp AAAGAATGGAGTTGCCATCCAGTGACAGGGAGAAGCCTGTGGTTTTaGTTGTTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTA +
Preference number: 2 (lower is better)
Translates to: KEWSCHPVTGRSLWF*LLQLGRDLGRNLWV
Trigger: TACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAACAACAAAAACCACAGGCTTCTCCCTGTCACTGGATGGCAACTCCATTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGCCCCGTCTCACTGAATaGGTGGTGCCCCATGGAAGG +
Preference number: 2 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLPRLTE*VVPHGR
Trigger: CCTTCCATGGGGCACCACCCATTCAGTGAGACGGGG...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR GCA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCAGGGATTACAGGCTCCTaGCACCATGCCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: GKRRVITGDTQNYEPKNAGITGS*HHAQLI
Trigger: AATTAGCTGGGCATGGTGGCAGGAGCCTGTAATCCC...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CCA 90 bp TTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTTAGGCAAATTTACTGGGCTACACAGTaGGAAATGGATACTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LQLGRDLGRNLWVSFRQIYWATQ*EMDTPG
Trigger: CCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTA...AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR TCA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCAGCTGGAGTACAGTGGTaGGATATTGGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: GKRRVITGDTQNYEPKNAAGVQW*DIGSLQ
Trigger: TTGCAGTGAGCCAATATCTCACCACTGTACTCCAGC...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR GCA 90 bp AGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGAAGGCTCCTGCCACCATaGCCAGCTAATTTTTCTATT +
Preference number: 2 (lower is better)
Translates to: SSRGNSGNLSGVGKGKRRRLLPP*PANFSI
Trigger: AATAGAAAAATTAGCTGGGCATGGTGGCAGGAGCCT...TCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR GCA 90 bp TTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTTAGGCAAATTAGAGGGACACGAGGATaGGTTATTTCCTCTGTTTGC +
Preference number: 2 (lower is better)
Translates to: LQLGRDLGRNLWVSFRQIRGTRG*VISSVC
Trigger: GCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCT...AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR TCA 90 bp TTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTTAGGCAAATTCAACGAATCAAGTGCTaGCCTAAATGGGGTATCTGT +
Preference number: 2 (lower is better)
Translates to: LQLGRDLGRNLWVSFRQIQRIKC*PKWGIC
Trigger: ACAGATACCCCATTTAGGTCAGCACTTGATTCGTTG...AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR GCA 72 bp CCCACCCAGGGCTTCCCCGTCTCACTGAATGGGTGGTaGCCCATGGAAGGGGTATCTCAAGCCACCCACCTG +
Preference number: 3 (lower is better)
Translates to: PTQGFPVSLNGW*PMEGVSQATHL
Trigger: CAGGTGGGTGGCTTGAGATACCCCTTCCATGGGGCACCACCCATTCAGTGAGACGGGGAAGCCCTGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR TCA 72 bp TGTCAAGCAGAAGCCACAGGCGGGGAAATGGCCCTGTaGTGGGAAGTGCCTGCTTTGGTGGAAACCCAGCCA +
Preference number: 3 (lower is better)
Translates to: CQAEATGGEMAL*WEVPALVETQP
Trigger: TGGCTGGGTTTCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCTGCTTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 72 bp ACACAGACCTTGCATGAACGAGGGCTAGGGCACACATaGCCTGTGGAACACCAAGAAGAGGGACACGAGGAT +
Preference number: 3 (lower is better)
Translates to: TQTLHERGLGHT*PVEHQEEGHED
Trigger: ATCCTCGTGTCCCTCTTCTTGGTGTTCCACAGGCCATGTGTGCCCTAGCCCTCGTTCATGCAAGGTCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR TCA 72 bp ACGAAAGTCATAATCCAGAGGGGCAGGATGGAGTTCTaGCCATGGTTACAGCAGCAGGGTGGCCAGGACAAC +
Preference number: 3 (lower is better)
Translates to: TKVIIQRGRMEF*PWLQQQGGQDN
Trigger: GTTGTCCTGGCCACCCTGCTGCTGTAACCATGGTCAGAACTCCATCCTGCCCCTCTGGATTATGACTTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR GCA 72 bp CCCCGGACATATTCTGAAGGTAGGACCAACAGGGCTTaGCGATGGACTGGATGTGGGCTGGAGAAATCAAGA +
Preference number: 3 (lower is better)
Translates to: PRTYSEGRTNRA*RWTGCGLEKSR
Trigger: TCTTGATTTCTCCAGCCCACATCCAGTCCATCGGCAAGCCCTGTTGGTCCTACCTTCAGAATATGTCCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 72 bp GCAGAGACAGTGAGACCAGAGTACTGGGCTACACAGTaGGAAATGGATACTCCTGGGACTGGGACACTCATT +
Preference number: 3 (lower is better)
Translates to: AETVRPEYWATQ*EMDTPGTGTLI
Trigger: AATGAGTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTCTCACTGTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CAA 90 bp GGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAATCCAGAGGAGCCTGTGGTTTTTGTaGTTGCAGTTAGGGAGAGAC +
Preference number: 3 (lower is better)
Translates to: GLEPKQDHCEETKVIIQRSLWFL*LQLGRD
Trigger: GTCTCTCCCTAACTGCAACAACAAAAACCACAGGCT...CCTCTGGATTATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 72 bp ACTCAATCGGATGCCTGGCTTAAGCAATCAAAAGAATaGAGTTGCCATCCAGTGACAGGGAGAAGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: TQSDAWLKQSKE*SCHPVTGRSLW
Trigger: CCACAGGCTTCTCCCTGTCACTGGATGGCAACTCCATTCTTTTGATTGCTTAAGCCAGGCATCCGATTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CAA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATATGGATGTCGAGGATTTaGCTGGTAACGAAACAAAGT +
Preference number: 3 (lower is better)
Translates to: EWKGLEPKQDHCEETKVIWMSRI*LVTKQS
Trigger: ACTTTGTTTCGTTACCAGCAAAATCCTCGACATCCA...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR GCA 72 bp TCGGATGCCTGGCTTAAGCAATCAAAAGAATGGAGTTaGCATCCAGTGACAGGGAGAAGCCTGTGGTTTTTG +
Preference number: 3 (lower is better)
Translates to: SDAWLKQSKEWS*HPVTGRSLWFL
Trigger: CAAAAACCACAGGCTTCTCCCTGTCACTGGATGGCAACTCCATTCTTTTGATTGCTTAAGCCAGGCATCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 72 bp ACATATTCTGAAGGTAGGACCAACAGGGCTTGCCGATaGACTGGATGTGGGCTGGAGAAATCAAGAAAGTAC +
Preference number: 3 (lower is better)
Translates to: TYSEGRTNRACR*TGCGLEKSRKY
Trigger: GTACTTTCTTGATTTCTCCAGCCCACATCCAGTCCATCGGCAAGCCCTGTTGGTCCTACCTTCAGAATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CAA 90 bp AGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGATACAGTGGTGAGATATaGGCTCACTGCAACCTCCGC +
Preference number: 3 (lower is better)
Translates to: SSRGNSGNLSGVGKGKRRYSGEI*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAATATCTCACCACTGTA...TCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR GCA 72 bp ATGGCCTGTGGAACACCAAGAAGAGGGACACGAGGATaGGTTATTTCCTCTGTTTGCAAATCTATCACAGAG +
Preference number: 3 (lower is better)
Translates to: MACGTPRRGTRG*VISSVCKSITE
Trigger: CTCTGTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGTGTTCCACAGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CCA 72 bp TCAGAGGAAAGGAGAGGGAAAGCCAGGAAACGGGTATaGATGTCGAGGATTTTGCTGGTAACGAAACAAAGT +
Preference number: 3 (lower is better)
Translates to: SEERRGKARKRV*MSRILLVTKQS
Trigger: ACTTTGTTTCGTTACCAGCAAAATCCTCGACATCCATACCCGTTTCCTGGCTTTCCCTCTCCTTTCCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CAA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCATTCCCTACACAGACCTaGCATGAACGAGGGCTAGGG +
Preference number: 3 (lower is better)
Translates to: GKRRVITGDTQNYEPKNAFPTQT*HERGLG
Trigger: CCCTAGCCCTCGTTCATGCAAGGTCTGTGTAGGGAA...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR TCA 72 bp GGCTTAAGCAATCAAAAGAATGGAGTTGCCATCCAGTaGCAGGGAGAAGCCTGTGGTTTTTGTTGTTGCAGT +
Preference number: 3 (lower is better)
Translates to: GLSNQKNGVAIQ*QGEACGFCCCS
Trigger: ACTGCAACAACAAAAACCACAGGCTTCTCCCTGTCACTGGATGGCAACTCCATTCTTTTGATTGCTTAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR GCA 72 bp AGAAGAGGGACACGAGGATGCGTTATTTCCTCTGTTTaGAAATCTATCACAGAGAGTAGAAGTGTTCGCTCA +
Preference number: 3 (lower is better)
Translates to: RRGTRGCVISSV*KSITESRSVRS
Trigger: TGAGCGAACACTTCTACTCTCTGTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR TCA 72 bp TCTGACTTTCACTCTAAGTTGAATGGGAGGTCTTTGTaGTGGTATCTAAGTCACTGTGATGCCAACATATCC +
Preference number: 3 (lower is better)
Translates to: SDFHSKLNGRSL*WYLSHCDANIS
Trigger: GGATATGTTGGCATCACAGTGACTTAGATACCATCACAAAGACCTCCCATTCAACTTAGAGTGAAAGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR TCA 72 bp ACATACAAACCAGCATTGGGGGTGCTTGAGAAACATTaGATGTATCATTGTCAACAGACAAAGATACCTCCC +
Preference number: 3 (lower is better)
Translates to: TYKPALGVLEKH*MYHCQQTKIPP
Trigger: GGGAGGTATCTTTGTCTGTTGACAATGATACATTCAATGTTTCTCAAGCACCCCCAATGCTGGTTTGTATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CAA 90 bp TTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTTAGGCAAATTCGTTATTTCCTCTGTTaGCAAATCTATCACAGAGAG +
Preference number: 3 (lower is better)
Translates to: LQLGRDLGRNLWVSFRQIRYFLC*QIYHRE
Trigger: CTCTCTGTGATAGATTTGCAAACAGAGGAAATAACG...AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CAA 90 bp AAAGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAATTCATATTCCCTCTTTaGTCCCATGGACATATTTCA +
Preference number: 3 (lower is better)
Translates to: KVPEEIVAIFQELEREREFIFPL*SHGHIS
Trigger: TGAAATATGTCCATGGGACAAAAGAGGGAATATGAA...TTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR-3UTR CAA 90 bp AAAGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGAAGAGAAAAACATCTaGAACTTCAAATTGAGGAGG +
Preference number: 3 (lower is better)
Translates to: KVPEEIVAIFQELEREREEEKNI*NFKLRR
Trigger: CCTCCTCAATTTGAAGTTCAAGATGTTTTTCTCTTC...TTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR TCA 72 bp AATGATAACCACATACAAACCAGCATTGGGGGTGCTTaGGAAACATTGAATGTATCATTGTCAACAGACAAA +
Preference number: 3 (lower is better)
Translates to: NDNHIQTSIGGA*ETLNVSLSTDK
Trigger: TTTGTCTGTTGACAATGATACATTCAATGTTTCTCAAGCACCCCCAATGCTGGTTTGTATGTGGTTATCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGCCGCCAGCTGCCGGTTaGGGCGAAAGCCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGPPAAG*GESPRA
Trigger: GGCCCTCGGGCTTTCGCCCCAACCGGCAGCTGGCGG...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp CTCGCACTGGGCTGGAGTACAGTGGTGAGATATTGGCTCACTGCAACCTCCGCCGTGCGGTGCGTCCTGTaGTCGGGGCCGGCGTCGCAC +
Preference number: 4 (lower is better)
Translates to: LALGWSTVVRYWLTATSAVRCVL*SGPASH
Trigger: GTGCGACGCCGGCCCCGAGCACAGGACGCACCGCAC...GGCGGAGGTTGCAGTGAGCCAATATCTCACCACTGTACTCCAGCCCAGTGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGGGGCGACTGGAAAGGTaGGCTCTAGATGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGGRLER*ALDGLW
Trigger: CCAGAGCCCATCTAGAGCTCACCTTTCCAGTCGCCC...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATACCTGCAGCGGCGCCGTaGGGTGCGTCCTGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: EWKGLEPKQDHCEETKVIPAAAP*GASCAR
Trigger: CCGAGCACAGGACGCACCGCACGGCGCCGCTGCAGG...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp CCCGTCTCACTGAATGGGTGGTGCCCCATGGAAGGGGTATCTCAAGCCACCCACGGACCAGCCGGCTCTTaGTCTCCCGCAGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PVSLNGWCPMEGVSQATHGPAGS*SPAVSA
Trigger: TGCAGAGACTGCGGGAGAGCAAGAGCCGGCTGGTCC...GTGGGTGGCTTGAGATACCCCTTCCATGGGGCACCACCCATTCAGTGAGACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGCATGGTTCTCCATCCTaGACACTGCGCAGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGHGSPS*TLRRSA
Trigger: CGCCGACCTGCGCAGTGTGCAGGATGGAGAACCATG...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp CTCGCACTGGGCTGGAGTACAGTGGTGAGATATTGGCTCACTGCAACCTCCGCCCCCACGTTGGCCTCCTaGGTCAAGGCGTCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LALGWSTVVRYWLTATSAPTLAS*VKASSN
Trigger: GTTGGAGGACGCCTTGACTCAGGAGGCCAACGTGGG...GGCGGAGGTTGCAGTGAGCCAATATCTCACCACTGTACTCCAGCCCAGTGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGAAGGGCCTTGCTCTGCTaGACCAGCCGGCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGRALLC*TSRLLL
Trigger: GAGCAAGAGCCGGCTGGTCCAGCAGAGCAAGGCCCT...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGTACACAGACCTTGCATaGACGAGGGCTAGGGCACAC +
Preference number: 4 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGYTDLA*TRARAH
Trigger: GTGTGCCCTAGCCCTCGTTCATGCAAGGTCTGTGTA...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACCGCTGGCACCTCTCCTaGAGCTCATCCGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHRWHLS*SSSASS
Trigger: GGAGCTGGCGGATGAGCTGCAGGAGAGGTGCCAGCG...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAATCCAGAGGGCTTTACCTGGTAGCTaGCGGCGGCCTCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GLEPKQDHCEETKVIIQRALPGS*RRPPAA
Trigger: CGCTGCAGGAGGCCGCCGGCAGCTACCAGGTAAAGC...CCTCTGGATTATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGACAAGCTCTGCCTCCTaGGTTCATGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGTSSAS*VHAILL
Trigger: CAGGAGAATGGCATGAACCCAGGAGGCAGAGCTTGT...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CCCGTCTCACTGAATGGGTGGTGCCCCATGGAAGGGGTATCTCAAGCCACCCACGGGAAGTGCCTGCTTTaGTGGAAACCCAGCCATGAG +
Preference number: 4 (lower is better)
Translates to: PVSLNGWCPMEGVSQATHGKCLL*WKPSHE
Trigger: CTCATGGCTGGGTTTCCACCAAAGCAGGCACTTCCC...GTGGGTGGCTTGAGATACCCCTTCCATGGGGCACCACCCATTCAGTGAGACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAACTCGGAGATGCACCTaGGGCAGAAGCTGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: EWKGLEPKQDHCEETKVITRRCT*GRSCGR
Trigger: GCGGCCACAGCTTCTGCCTCAGGTGCATCTCCGAGT...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp CCCGTCTCACTGAATGGGTGGTGCCCCATGGAAGGGGTATCTCAAGCCACCCACCTGCTTCCAGCCTTGTaGCAGCCTTACTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PVSLNGWCPMEGVSQATHLLPAL*QPYFCS
Trigger: TGAGCAGAAGTAAGGCTGTCACAAGGCTGGAAGCAG...GTGGGTGGCTTGAGATACCCCTTCCATGGGGCACCACCCATTCAGTGAGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp CCCGTCTCACTGAATGGGTGGTGCCCCATGGAAGGGGTATCTCAAGCCACCCACGGATGCCCAATTTCCTaGCCCTGCTATTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PVSLNGWCPMEGVSQATHGCPIS*PCYCCG
Trigger: CCCACAACAATAGCAGGGTCAGGAAATTGGGCATCC...GTGGGTGGCTTGAGATACCCCTTCCATGGGGCACCACCCATTCAGTGAGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp CTCGCACTGGGCTGGAGTACAGTGGTGAGATATTGGCTCACTGCAACCTCCGCCGAGATATTGGCTCACTaGAACCTCCGCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LALGWSTVVRYWLTATSAEILAH*NLRLQG
Trigger: ACCCTGGAGGCGGAGGTTGCAGTGAGCCAATATCTC...GGCGGAGGTTGCAGTGAGCCAATATCTCACCACTGTACTCCAGCCCAGTGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CCCGTCTCACTGAATGGGTGGTGCCCCATGGAAGGGGTATCTCAAGCCACCCACACAGTGGTGAGATATTaGCTCACTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: PVSLNGWCPMEGVSQATHTVVRY*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAATATCTCACCACTGT...GTGGGTGGCTTGAGATACCCCTTCCATGGGGCACCACCCATTCAGTGAGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGAGGGCTAGGGCACACATaGCCTGTGGAACACCAAGAA +
Preference number: 4 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGGLGHT*PVEHQE
Trigger: TTCTTGGTGTTCCACAGGCCATGTGTGCCCTAGCCC...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGGGAAATGGATACTCCTaGGACTGGGACACTCATTCC +
Preference number: 4 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGGNGYS*DWDTHS
Trigger: GGAATGAGTGTCCCAGTCCCAGGAGTATCCATTTCC...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGAAAGTGCCTGCTTTGGTaGAAACCCAGCCATGAGGCC +
Preference number: 4 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGKCLLW*KPSHEA
Trigger: GGCCTCATGGCTGGGTTTCCACCAAAGCAGGCACTT...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CCCGTCTCACTGAATGGGTGGTGCCCCATGGAAGGGGTATCTCAAGCCACCCACGTGAGACCAGAGTACTaGGCTACACAGTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: PVSLNGWCPMEGVSQATHVRPEY*ATQWEM
Trigger: CATTTCCCACTGTGTAGCCCAGTACTCTGGTCTCAC...GTGGGTGGCTTGAGATACCCCTTCCATGGGGCACCACCCATTCAGTGAGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACAACAGGGCTTGCCGATaGACTGGATGTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHNRACR*TGCGLE
Trigger: CTCCAGCCCACATCCAGTCCATCGGCAAGCCCTGTT...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CAA 72 bp GTTGCTGAGCTGAAGTCCACCTTCCCTACACAGACCTaGCATGAACGAGGGCTAGGGCACACATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: VAELKSTFPTQT*HERGLGHTWPV
Trigger: CACAGGCCATGTGTGCCCTAGCCCTCGTTCATGCAAGGTCTGTGTAGGGAAGGTGGACTTCAGCTCAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp CTCGCACTGGGCTGGAGTACAGTGGTGAGATATTGGCTCACTGCAACCTCCGCCATTCAGCAGAGACAGTaGGACCAGAGTACTGGGCTA +
Preference number: 4 (lower is better)
Translates to: LALGWSTVVRYWLTATSAIQQRQ*DQSTGL
Trigger: TAGCCCAGTACTCTGGTCTCACTGTCTCTGCTGAAT...GGCGGAGGTTGCAGTGAGCCAATATCTCACCACTGTACTCCAGCCCAGTGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAGGAGTTGCCATCCAGTaGCAGGGAGAAGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: EWKGLEPKQDHCEETKVIGVAIQ*QGEACG
Trigger: ACCACAGGCTTCTCCCTGTCACTGGATGGCAACTCC...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGAGGATACTCCTGGGACTaGGACACTCATTCCATCCTA +
Preference number: 4 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGGYSWD*DTHSIL
Trigger: TAGGATGGAATGAGTGTCCCAGTCCCAGGAGTATCC...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGATACTGGGCTACACAGTaGGAAATGGATACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGYWATQ*EMDTPG
Trigger: CCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTA...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGAACATCCTCTAGGGCCTaGGGATTCACTGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGTSSRA*GFTVRI
Trigger: AATCCTCACAGTGAATCCCCAGGCCCTAGAGGATGT...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp GGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAATCCAGAGGATGGTCTCAATCTCCTaGCCTCGTGATCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: GLEPKQDHCEETKVIIQRMVSIS*PRDLPT
Trigger: GGTGGGCAGATCACGAGGTCAGGAGATTGAGACCAT...CCTCTGGATTATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAATCCAGAGGGGGATTACAGGCTCCTaGCACCATGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: GLEPKQDHCEETKVIIQRGITGS*HHAQLI
Trigger: AATTAGCTGGGCATGGTGGCAGGAGCCTGTAATCCC...CCTCTGGATTATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAATCCAGAGGTCACTGAATGGGTGGTaGCCCATGGAAGGGGTATCT +
Preference number: 4 (lower is better)
Translates to: GLEPKQDHCEETKVIIQRSLNGW*PMEGVS
Trigger: AGATACCCCTTCCATGGGGCACCACCCATTCAGTGA...CCTCTGGATTATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATACACCTCCAGAATAGCTaGGATTACAGGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EWKGLEPKQDHCEETKVIHLQNS*DYRLLP
Trigger: TGGCAGGAGCCTGTAATCCCAGCTATTCTGGAGGTG...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp CCCGTCTCACTGAATGGGTGGTGCCCCATGGAAGGGGTATCTCAAGCCACCCACTTTACCATAACACAGTaGGGCCAGTATAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: PVSLNGWCPMEGVSQATHFTITQ*GQYNCS
Trigger: GGAACAATTATACTGGCCTCACTGTGTTATGGTAAA...GTGGGTGGCTTGAGATACCCCTTCCATGGGGCACCACCCATTCAGTGAGACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACTCCAATCTGAAGCGCTaGCTCTGCATTTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHSNLKR*LCISTF
Trigger: GAAAGTGGAAATGCAGAGGCAGCGCTTCAGATTGGA...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp AGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGACTCTCCCGCAGTCTCTaGAGCGTCGCTCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSRGNSGNLSGVGKGKRRLSRSL*SVARSS
Trigger: GGAGGAGCGAGCGACGCTGCAGAGACTGCGGGAGAG...TCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACAGAGGGACACGAGGATaGGTTATTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHRGTRG*VISSVC
Trigger: GCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCT...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CTCGCACTGGGCTGGAGTACAGTGGTGAGATATTGGCTCACTGCAACCTCCGCCCCCTCTTTTGTCCCATaGACATATTTCACAGCAACA +
Preference number: 4 (lower is better)
Translates to: LALGWSTVVRYWLTATSAPSFVP*TYFTAT
Trigger: TGTTGCTGTGAAATATGTCCATGGGACAAAAGAGGG...GGCGGAGGTTGCAGTGAGCCAATATCTCACCACTGTACTCCAGCCCAGTGCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACCCGATGGACTGGATGTaGGCTGGAGAAATCAAGAAA +
Preference number: 4 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHPMDWM*AGEIKK
Trigger: TTTCTTGATTTCTCCAGCCCACATCCAGTCCATCGG...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp ACCAAGAAGAGGGACACGAGGATGCGTTATTTCCTCTGTTTGCAAATCTATCACACAAAGAGCCTCCACTaGGCCTGGCAAGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: TKKRDTRMRYFLCLQIYHTKSLH*AWQGRL
Trigger: CAGTCGCCCTTGCCAGGCTCAGTGGAGGCTCTTTGT...GTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGACCAGGCCCGCCAGCTaGCGGTTGGGGCGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLTRPAS*RLGRKP
Trigger: GGGCTTTCGCCCCAACCGGCAGCTGGCGGGCCTGGT...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACCCAAGAAAATCCCAATaGAGCGAGGACTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHPRKSQ*SEDFPV
Trigger: AACTGGAAAGTCCTCGCTGCATTGGGATTTTCTTGG...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp ACCAAGAAGAGGGACACGAGGATGCGTTATTTCCTCTGTTTGCAAATCTATCACCCCCGTCTCACTGAATaGGTGGTGCCCCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: TKKRDTRMRYFLCLQIYHPRLTE*VVPHGR
Trigger: CCTTCCATGGGGCACCACCCATTCAGTGAGACGGGG...GTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CTCGCACTGGGCTGGAGTACAGTGGTGAGATATTGGCTCACTGCAACCTCCGCCAAGCAATCAAAAGAATaGAGTTGCCATCCAGTGACA +
Preference number: 4 (lower is better)
Translates to: LALGWSTVVRYWLTATSAKQSKE*SCHPVT
Trigger: TGTCACTGGATGGCAACTCCATTCTTTTGATTGCTT...GGCGGAGGTTGCAGTGAGCCAATATCTCACCACTGTACTCCAGCCCAGTGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp ACCAAGAAGAGGGACACGAGGATGCGTTATTTCCTCTGTTTGCAAATCTATCACCCACAGGCGGGGAAATaGCCCTGTGATGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: TKKRDTRMRYFLCLQIYHPQAGK*PCDGKC
Trigger: GCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGG...GTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp CTCGCACTGGGCTGGAGTACAGTGGTGAGATATTGGCTCACTGCAACCTCCGCCACAGAATTAAGGAGGTaGTACTGGAATAGTATCAGA +
Preference number: 4 (lower is better)
Translates to: LALGWSTVVRYWLTATSATELRR*YWNSIR
Trigger: TCTGATACTATTCCAGTATCACCTCCTTAATTCTGT...GGCGGAGGTTGCAGTGAGCCAATATCTCACCACTGTACTCCAGCCCAGTGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp TTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTTAGGCAAATTGCTTCCCCGTCTCACTaGATGGGTGGTGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: LQLGRDLGRNLWVSFRQIASPSH*MGGAPW
Trigger: CCATGGGGCACCACCCATTCAGTGAGACGGGGAAGC...AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp AGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGAACGCTGACCGGCTCCTaGAGGAAATCCAGGCACACC +
Preference number: 4 (lower is better)
Translates to: SSRGNSGNLSGVGKGKRRTLTGS*RKSRHT
Trigger: GGTGTGCCTGGATTTCCTGCAGGAGCCGGTCAGCGT...TCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAATCCAGAGGTCAAAAGAATGGAGTTaGCATCCAGTGACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLEPKQDHCEETKVIIQRSKEWS*HPVTGR
Trigger: TCTCCCTGTCACTGGATGGCAACTCCATTCTTTTGA...CCTCTGGATTATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp ACCAAGAAGAGGGACACGAGGATGCGTTATTTCCTCTGTTTGCAAATCTATCACAGGACCAACAGGGCTTaGCGATGGACTGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: TKKRDTRMRYFLCLQIYHRTNRA*RWTGCG
Trigger: CCCACATCCAGTCCATCGGCAAGCCCTGTTGGTCCT...GTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp ACCAAGAAGAGGGACACGAGGATGCGTTATTTCCTCTGTTTGCAAATCTATCACGCAGCTGGAGCAGAATaGAAAGGGAAGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TKKRDTRMRYFLCLQIYHAAGAE*KGKWGW
Trigger: CCACCCCCACTTCCCTTTGCATTCTGCTCCAGCTGC...GTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAATCCAGAGGTGCTATTGTTGTGGGTaGCAAGATAAGAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: GLEPKQDHCEETKVIIQRCYCCG*QDKRSC
Trigger: GCAACTCCTCTTATCTTGCCACCCACAACAATAGCA...CCTCTGGATTATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGGGCCGCAGTCCACGCTaGCCGGCTCCTGCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLGRSPR*PAPAGN
Trigger: ATTTCCTGCAGGAGCCGGTCAGCGTGGACTGCGGCC...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp AGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGAGGGGAAATGGCCCTGTaGTGGGAAGTGCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSRGNSGNLSGVGKGKRRGEMAL*WEVPAL
Trigger: CAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCC...TCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCACGCCTCAGCTGCCGTTaGTCCTCCTGGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GKRRVITGDTQNYEPKNARLSCR*SSWARK
Trigger: CTTTCTGGCCCAGGAGGAGCAACGGCAGCTGAGGCG...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp TTATTTCCTCTGTTTGCAAATCTATCACAGAGAGTAGAAGTGTTCGCTCATGATAAGAGCAGACTCGGGTaGGCCGTGGCGGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: LFPLFANLSQRVEVFAHDKSRLG*AVAGSS
Trigger: GCTGGATCCCGCCACGGCGCACCCGAGTCTGCTCTT...ATCATGAGCGAACACTTCTACTCTCTGTGATAGATTTGCAAACAGAGGAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AAAGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAATGCCGTTGCTCCTCCTaGGCCAGAAAGCCACGATGC +
Preference number: 4 (lower is better)
Translates to: KVPEEIVAIFQELERERECRCSS*ARKPRC
Trigger: GCATCGTGGCTTTCTGGCCCAGGAGGAGCAACGGCA...TTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGATTGGGGAGAAATTTGTaGGTAAGTTTTAGGCAAATT +
Preference number: 4 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGLGRNL*VSFRQI
Trigger: AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAA...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACAGATACCTCCCCTTGTaGTGTTTACATTTAGCACAA +
Preference number: 4 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHRYLPL*CLHLAQ
Trigger: TTGTGCTAAATGTAAACACCACAAGGGGAGGTATCT...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CAA 72 bp TGCCATCCAGTGACAGGGAGAAGCCTGTGGTTTTTGTaGTTGCAGTTAGGGAGAGACTTGGGGAGAAATTTG +
Preference number: 4 (lower is better)
Translates to: CHPVTGRSLWFL*LQLGRDLGRNL
Trigger: CAAATTTCTCCCCAAGTCTCTCCCTAACTGCAACAACAAAAACCACAGGCTTCTCCCTGTCACTGGATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp AGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGACTTGGCAGTGTGTCTTaGCAGACCCCTAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: SSRGNSGNLSGVGKGKRRLGSVS*QTPKPH
Trigger: GTGGGGTTTAGGGGTCTGTCAAGACACACTGCCAAG...TCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAACTTTCACTCTAAGTTaGATGGGAGGTCTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: EWKGLEPKQDHCEETKVITFTLS*MGGLCD
Trigger: ATCACAAAGACCTCCCATTCAACTTAGAGTGAAAGT...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCATTCAGGGCCTTGCTCTaGTGGACCAGCCGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GKRRVITGDTQNYEPKNAFRALL*WTSRLL
Trigger: CAAGAGCCGGCTGGTCCAGCAGAGCAAGGCCCTGAA...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCACTCCATCCTGCACACTaGGCAGGTCGGCGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: GKRRVITGDTQNYEPKNALHPAH*AGRRSR
Trigger: TCTTGACCGCCGACCTGCGCAGTGTGCAGGATGGAG...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp GGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAATCCAGAGGTGTGACATTGTAGAATaGAATTTCACCGGCTTCATA +
Preference number: 4 (lower is better)
Translates to: GLEPKQDHCEETKVIIQRCDIVE*NFTGFI
Trigger: TATGAAGCCGGTGAAATTTCATTCTACAATGTCACA...CCTCTGGATTATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp GGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAATCCAGAGGCAGAGAAGAGTTGGTTaGATGTGTAGATATAAGATC +
Preference number: 4 (lower is better)
Translates to: GLEPKQDHCEETKVIIQRQRRVG*MCRYKI
Trigger: GATCTTATATCTACACATTCAACCAACTCTTCTCTG...CCTCTGGATTATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp GGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAATCCAGAGGGTGCTTGAGAAACATTaGATGTATCATTGTCAACAG +
Preference number: 4 (lower is better)
Translates to: GLEPKQDHCEETKVIIQRVLEKH*MYHCQQ
Trigger: CTGTTGACAATGATACATTCAATGTTTCTCAAGCAC...CCTCTGGATTATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CACATTGGTTTACTGACTGATATAAACCACAATAATATGCACAGTGAGACAGGAGACTCGGGTGCGCCGTaGCGGGATCCAGCTTTACAT +
Preference number: 4 (lower is better)
Translates to: HIGLLTDINHNNMHSETGDSGAP*RDPALH
Trigger: ATGTAAAGCTGGATCCCGCCACGGCGCACCCGAGTC...TCCTGTCTCACTGTGCATATTATTGTGGTTTATATCAGTCAGTAAACCAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AAAGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGGCACACATGGCCTGTaGAACACCAAGAAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: KVPEEIVAIFQELEREREGTHGL*NTKKRD
Trigger: GTCCCTCTTCTTGGTGTTCCACAGGCCATGTGTGCC...TTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCAGTTACAGCAGCAGGGTaGCCAGGACAACTGAACCCC +
Preference number: 4 (lower is better)
Translates to: GKRRVITGDTQNYEPKNAVTAAG*PGQLNP
Trigger: GGGGTTCAGTTGTCCTGGCCACCCTGCTGCTGTAAC...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp AGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGACTGAAGCGCTGCCTCTaGATTTCCACTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSRGNSGNLSGVGKGKRRLKRCL*ISTFSF
Trigger: GAAGGAGAAAGTGGAAATGCAGAGGCAGCGCTTCAG...TCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCACCCTCCTCCCAGGGATaGAGCATGCTGTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GKRRVITGDTQNYEPKNAPSSQG*SMLSSV
Trigger: AACTGAAGACAGCATGCTGCATCCCTGGGAGGAGGG...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGACTACACAGTGGGAAATaGATACTCCTGGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: SSRGNSGNLSGVGKGKRRLHSGK*ILLGLG
Trigger: TCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAG...TCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCAGGCTTGCCGATGGACTaGATGTGGGCTGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: GKRRVITGDTQNYEPKNAGLPMD*MWAGEI
Trigger: GATTTCTCCAGCCCACATCCAGTCCATCGGCAAGCC...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCAATGCTGTTGCTGAGCTaGAGTCCACCTTCCCTACAC +
Preference number: 4 (lower is better)
Translates to: GKRRVITGDTQNYEPKNAMLLLS*SPPSLH
Trigger: GTGTAGGGAAGGTGGACTTCAGCTCAGCAACAGCAT...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp TTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTTAGGCAAATTGCTGTGTGGTATCACTaGGAAGCTGGATCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LQLGRDLGRNLWVSFRQIAVWYH*EAGSQK
Trigger: CTTCTGAGATCCAGCTTCTCAGTGATACCACACAGC...AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp TTATTTCCTCTGTTTGCAAATCTATCACAGAGAGTAGAAGTGTTCGCTCATGATGTCTCACTGAATGGGTaGTGCCCCATGGAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: LFPLFANLSQRVEVFAHDVSLNG*CPMEGV
Trigger: TACCCCTTCCATGGGGCACCACCCATTCAGTGAGAC...ATCATGAGCGAACACTTCTACTCTCTGTGATAGATTTGCAAACAGAGGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCATCCAGAGGGGCAGGATaGAGTTCTGACCATGGTTAC +
Preference number: 4 (lower is better)
Translates to: GKRRVITGDTQNYEPKNASRGAG*SSDHGY
Trigger: GTAACCATGGTCAGAACTCCATCCTGCCCCTCTGGA...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp AAAGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAATCTCAAACTCCAATCTaGAGCGCTGCCTCTGCATTT +
Preference number: 4 (lower is better)
Translates to: KVPEEIVAIFQELERERESQTPI*SAASAF
Trigger: AAATGCAGAGGCAGCGCTTCAGATTGGAGTTTGAGA...TTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp AAAGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGCCAGAAAGCCACGATaGTTCTCAAACTCCAATCTG +
Preference number: 4 (lower is better)
Translates to: KVPEEIVAIFQELEREREARKPR*FSNSNL
Trigger: CAGATTGGAGTTTGAGAAGCATCGTGGCTTTCTGGC...TTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGCATGGGGATGTTCTCTaGTTCCAGCCTTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLHGDVL*FQPCDS
Trigger: GCTGTCACAAGGCTGGAAGCAGAGAACATCCCCATG...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGTCTTTTTCCCCACGTTaGCCTCCTGAGTCAAGGCGT +
Preference number: 4 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLSFSPR*PPESRR
Trigger: ACGCCTTGACTCAGGAGGCCAACGTGGGGAAAAAGA...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGATCGCTCAGGGTTGTTaGGGACATCCCTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLIAQGC*GHPSMV
Trigger: AACCATGGAGGGATGTCCCCAACAACCCTGAGCGAT...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp TTATTTCCTCTGTTTGCAAATCTATCACAGAGAGTAGAAGTGTTCGCTCATGATTCTCAGGAGATGGCGTaGTTTCCCCCTTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LFPLFANLSQRVEVFAHDSQEMA*FPPFLA
Trigger: TGCCAAGAAAGGGGGAAACCACGCCATCTCCTGAGA...ATCATGAGCGAACACTTCTACTCTCTGTGATAGATTTGCAAACAGAGGAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGCCCATTCTCAGGAGATaGCGTGGTTTCCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLPILRR*RGFPLS
Trigger: AGAAAGGGGGAAACCACGCCATCTCCTGAGAATGGG...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGAGGACTGGATGTGGGCTaGAGAAATCAAGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: SSRGNSGNLSGVGKGKRRGLDVG*RNQEST
Trigger: AGTACTTTCTTGATTTCTCCAGCCCACATCCAGTCC...TCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp CACATTGGTTTACTGACTGATATAAACCACAATAATATGCACAGTGAGACAGGAGCTGGAGTACAGTGGTaGGATATTGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: HIGLLTDINHNNMHSETGAGVQW*DIGSLQ
Trigger: TTGCAGTGAGCCAATATCTCACCACTGTACTCCAGC...TCCTGTCTCACTGTGCATATTATTGTGGTTTATATCAGTCAGTAAACCAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGTCTGCAAACCCAGGATaGAGGGCCATGTGTCAAATC +
Preference number: 4 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLSANPG*RAMCQI
Trigger: GATTTGACACATGGCCCTGCATCCTGGGTTTGCAGA...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp TTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTTAGGCAAATTAGCATTGGGGGTGCTTaGGAAACATTGAATGTATCA +
Preference number: 4 (lower is better)
Translates to: LQLGRDLGRNLWVSFRQISIGGA*ETLNVS
Trigger: TGATACATTCAATGTTTCTCAAGCACCCCCAATGCT...AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGCTGTCTTCAGTTCCATaGGGATGTTCTCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLLSSVP*GCSLLP
Trigger: TGGAAGCAGAGAACATCCCCATGGAACTGAAGACAG...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp AAAGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAACAGGGAGAAGCCTGTaGTTTTTGTTGTTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: KVPEEIVAIFQELERERETGRSL*FLLLQL
Trigger: TAACTGCAACAACAAAAACCACAGGCTTCTCCCTGT...TTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp TTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTTAGGCAAATTGTATCACTGAGAAGCTaGATCTCAGAAGAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: LQLGRDLGRNLWVSFRQIVSLRS*ISEELR
Trigger: CCTTAACTCTTCTGAGATCCAGCTTCTCAGTGATAC...AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp CACATTGGTTTACTGACTGATATAAACCACAATAATATGCACAGTGAGACAGGAGAAGCAGGATCTAAATaGTCCCTGGATGCCCAATTT +
Preference number: 4 (lower is better)
Translates to: HIGLLTDINHNNMHSETGEAGSK*SLDAQF
Trigger: AAATTGGGCATCCAGGGATCATTTAGATCCTGCTTC...TCCTGTCTCACTGTGCATATTATTGTGGTTTATATCAGTCAGTAAACCAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp TTATTTCCTCTGTTTGCAAATCTATCACAGAGAGTAGAAGTGTTCGCTCATGATCAACGAATCAAGTGCTaGCCTAAATGGGGTATCTGT +
Preference number: 4 (lower is better)
Translates to: LFPLFANLSQRVEVFAHDQRIKC*PKWGIC
Trigger: ACAGATACCCCATTTAGGTCAGCACTTGATTCGTTG...ATCATGAGCGAACACTTCTACTCTCTGTGATAGATTTGCAAACAGAGGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR TCA 90 bp TTATTTCCTCTGTTTGCAAATCTATCACAGAGAGTAGAAGTGTTCGCTCATGATGTATCTAAGTCACTGTaGTGCCAACATATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LFPLFANLSQRVEVFAHDVSKSL*CQHILG
Trigger: CCCAAGGATATGTTGGCATCACAGTGACTTAGATAC...ATCATGAGCGAACACTTCTACTCTCTGTGATAGATTTGCAAACAGAGGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp CACATTGGTTTACTGACTGATATAAACCACAATAATATGCACAGTGAGACAGGAAGGCTCCTGCCACCATaGCCAGCTAATTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: HIGLLTDINHNNMHSETGRLLPP*PANFSI
Trigger: AATAGAAAAATTAGCTGGGCATGGTGGCAGGAGCCT...TCCTGTCTCACTGTGCATATTATTGTGGTTTATATCAGTCAGTAAACCAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGGATCTAAATGATCCCTaGATGCCCAATTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLDLNDP*MPNFLT
Trigger: GGTCAGGAAATTGGGCATCCAGGGATCATTTAGATC...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp TTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTTAGGCAAATTCAATCTTTCAGGAGTTaGAAAGGGAAAGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LQLGRDLGRNLWVSFRQIQSFRS*KGKEKS
Trigger: ACTCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTG...AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp CACATTGGTTTACTGACTGATATAAACCACAATAATATGCACAGTGAGACAGGAAGCTTTACATCCACTTaGAACTTCCTTAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HIGLLTDINHNNMHSETGSFTST*NFLKSS
Trigger: GGAGCTCTTAAGGAAGTTCCAAGTGGATGTAAAGCT...TCCTGTCTCACTGTGCATATTATTGTGGTTTATATCAGTCAGTAAACCAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CCA 90 bp TTATTTCCTCTGTTTGCAAATCTATCACAGAGAGTAGAAGTGTTCGCTCATGATGCTAGGACTGCATCTTaGGAACAGAATTTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: LFPLFANLSQRVEVFAHDARTAS*EQNFRD
Trigger: ATCTCTAAAATTCTGTTCCCAAGATGCAGTCCTAGC...ATCATGAGCGAACACTTCTACTCTCTGTGATAGATTTGCAAACAGAGGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR GCA 90 bp TTATTTCCTCTGTTTGCAAATCTATCACAGAGAGTAGAAGTGTTCGCTCATGATGTTATTTCCTCTGTTTaGAAATCTATCACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LFPLFANLSQRVEVFAHDVISSV*KSITES
Trigger: ACTCTCTGTGATAGATTTGCAAACAGAGGAAATAAC...ATCATGAGCGAACACTTCTACTCTCTGTGATAGATTTGCAAACAGAGGAAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
3UTR CAA 72 bp AATCTTCCCATATGCAAATATTTCATATTCCCTCTTTaGTCCCATGGACATATTTCACAGCAACAACGAATC +
Preference number: 4 (lower is better)
Translates to: NLPICKYFIFPL*SHGHISQQQRI
Trigger: GATTCGTTGTTGCTGTGAAATATGTCCATGGGACAAAAGAGGGAATATGAAATATTTGCATATGGGAAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 90 bp GGAGCTTTACCTGGTAGCTGCCGGCGGCCTCCTGCAGCGGCGCCGTaGGGTGCGTCCTGTGCTCGGGGCCGGCGTCGCACACCCAGCACA +
Preference number: 5 (lower is better)
Translates to: GALPGSCRRPPAAAP*GASCARGRRRTPST
Trigger: TGTGCTGGGTGTGCGACGCCGGCCCCGAGCACAGGACGCACCGCACGGCGCCGCTGCAGGAGGCCGCCGGCAGCTACCAGGTAAAGCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 90 bp GCCTTGCTCTGCTGGACCAGCCGGCTCTTGCTCTCCCGCAGTCTCTaGAGCGTCGCTCGCTCCTCCGCCTCCAGCCGCCTCAGCTGCCGT +
Preference number: 5 (lower is better)
Translates to: ALLCWTSRLLLSRSL*SVARSSASSRLSCR
Trigger: ACGGCAGCTGAGGCGGCTGGAGGCGGAGGAGCGAGCGACGCTGCAGAGACTGCGGGAGAGCAAGAGCCGGCTGGTCCAGCAGAGCAAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 90 bp CTCACACCCTCCAGCAGACCCAGGGCCGGGCGCTGGCACCTCTCCTaGAGCTCATCCGCCAGCTCCTTCAGGGCCTTGCTCTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: LTPSSRPRAGRWHLS*SSSASSFRALLCWT
Trigger: GGTCCAGCAGAGCAAGGCCCTGAAGGAGCTGGCGGATGAGCTGCAGGAGAGGTGCCAGCGCCCGGCCCTGGGTCTGCTGGAGGGTGTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 90 bp CAGGGTTGTTGGGGACATCCCTCCATGGTTCTCCATCCTGCACACTaGGCAGGTCGGCGGTCAAGAGCAGACTCGGGTGCGCCGTGGCGG +
Preference number: 5 (lower is better)
Translates to: QGCWGHPSMVLHPAH*AGRRSRADSGAPWR
Trigger: CCGCCACGGCGCACCCGAGTCTGCTCTTGACCGCCGACCTGCGCAGTGTGCAGGATGGAGAACCATGGAGGGATGTCCCCAACAACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 90 bp TGCAGCGTCGCTCGCTCCTCCGCCTCCAGCCGCCTCAGCTGCCGTTaGTCCTCCTGGGCCAGAAAGCCACGATGCTTCTCAAACTCCAAT +
Preference number: 5 (lower is better)
Translates to: CSVARSSASSRLSCR*SSWARKPRCFSNSN
Trigger: ATTGGAGTTTGAGAAGCATCGTGGCTTTCTGGCCCAGGAGGAGCAACGGCAGCTGAGGCGGCTGGAGGCGGAGGAGCGAGCGACGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 90 bp AATCGCTCAGGGTTGTTGGGGACATCCCTCCATGGTTCTCCATCCTaGACACTGCGCAGGTCGGCGGTCAAGAGCAGACTCGGGTGCGCC +
Preference number: 5 (lower is better)
Translates to: NRSGLLGTSLHGSPS*TLRRSAVKSRLGCA
Trigger: GGCGCACCCGAGTCTGCTCTTGACCGCCGACCTGCGCAGTGTGCAGGATGGAGAACCATGGAGGGATGTCCCCAACAACCCTGAGCGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CCA 90 bp GCACACTGCGCAGGTCGGCGGTCAAGAGCAGACTCGGGTGCGCCGTaGCGGGATCCAGCTTTACATCCACTTGGAACTTCCTTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: AHCAGRRSRADSGAP*RDPALHPLGTSLRA
Trigger: AGCTCTTAAGGAAGTTCCAAGTGGATGTAAAGCTGGATCCCGCCACGGCGCACCCGAGTCTGCTCTTGACCGCCGACCTGCGCAGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CCA 90 bp GGGCCATGTGTCAAATCGCTCAGGGTTGTTGGGGACATCCCTCCATaGTTCTCCATCCTGCACACTGCGCAGGTCGGCGGTCAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GPCVKSLRVVGDIPP*FSILHTAQVGGQEQ
Trigger: CTGCTCTTGACCGCCGACCTGCGCAGTGTGCAGGATGGAGAACCATGGAGGGATGTCCCCAACAACCCTGAGCGATTTGACACATGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACTGGACCAGCCGGCTCTaGCTCTCCCGCAGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHWTSRL*LSRSLC
Trigger: GCAGAGACTGCGGGAGAGCAAGAGCCGGCTGGTCCA...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAAGCTCCTTCAGGGCCTaGCTCTGCTGGACCAGCCGG +
Preference number: 5 (lower is better)
Translates to: EWKGLEPKQDHCEETKVISSFRA*LCWTSR
Trigger: CCGGCTGGTCCAGCAGAGCAAGGCCCTGAAGGAGCT...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 90 bp AGCCGCCTCAGCTGCCGTTGCTCCTCCTGGGCCAGAAAGCCACGATaGTTCTCAAACTCCAATCTGAAGCGCTGCCTCTGCATTTCCACT +
Preference number: 5 (lower is better)
Translates to: SRLSCRCSSWARKPR*FSNSNLKRCLCIST
Trigger: AGTGGAAATGCAGAGGCAGCGCTTCAGATTGGAGTTTGAGAAGCATCGTGGCTTTCTGGCCCAGGAGGAGCAACGGCAGCTGAGGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CCA 90 bp GCAAACCCAGGATGCAGGGCCATGTGTCAAATCGCTCAGGGTTGTTaGGGACATCCCTCCATGGTTCTCCATCCTGCACACTGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: ANPGCRAMCQIAQGC*GHPSMVLHPAHCAG
Trigger: ACCTGCGCAGTGTGCAGGATGGAGAACCATGGAGGGATGTCCCCAACAACCCTGAGCGATTTGACACATGGCCCTGCATCCTGGGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGATACAGTGGTGAGATATaGGCTCACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGYSGEI*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAATATCTCACCACTGTA...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 90 bp CCCAGGGATGCAGCATGCTGTCTTCAGTTCCATGGGGATGTTCTCTaGTTCCAGCCTTGTGACAGCCTTACTTCTGCTCAGGACTCCTCT +
Preference number: 5 (lower is better)
Translates to: PRDAACCLQFHGDVL*FQPCDSLTSAQDSS
Trigger: AGAGGAGTCCTGAGCAGAAGTAAGGCTGTCACAAGGCTGGAAGCAGAGAACATCCCCATGGAACTGAAGACAGCATGCTGCATCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp GAGTGGAAGGGCCTAGAGCCCAAGCAGGACCACTGTGAGGAAACGAAAGTCATAAATCGCTCAGGGTTGTaGGGGACATCCCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: EWKGLEPKQDHCEETKVINRSGL*GTSLHG
Trigger: ACCATGGAGGGATGTCCCCAACAACCCTGAGCGATT...TATGACTTTCGTTTCCTCACAGTGGTCCTGCTTGGGCTCTAGGCCCTTCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACTCAAATCGCTCAGGGTaGTTGGGGACATCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHSNRSG*LGTSLH
Trigger: ATGGAGGGATGTCCCCAACAACCCTGAGCGATTTGA...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGTGGATGTCGAGGATTTaGCTGGTAACGAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGWMSRI*LVTKQS
Trigger: ACTTTGTTTCGTTACCAGCAAAATCCTCGACATCCA...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGCCCGCCAGCTGCCGGTaGGGGCGAAAGCCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLPASCR*GRKPEG
Trigger: GCCCTCGGGCTTTCGCCCCAACCGGCAGCTGGCGGG...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACTGGTTTCCCCCTTTCTaGGCAGTGTGTCTTGACAGA +
Preference number: 5 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHWFPPF*AVCLDR
Trigger: TCTGTCAAGACACACTGCCAAGAAAGGGGGAAACCA...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS TCA 90 bp GAAAATCCCAATGCAGCGAGGACTTTCCAGTTGGAGAAGAGGCACTaGTGGGGAGGCAAGGACCATGTACTCATTCCCTTTCAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: ENPNAARTFQLEKRH*WGGKDHVLIPFQQP
Trigger: TGGCTGCTGAAAGGGAATGAGTACATGGTCCTTGCCTCCCCATCAGTGCCTCTTCTCCAACTGGAAAGTCCTCGCTGCATTGGGATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp GATGGGGGTTCAGATCCTCTAGGGCCTGGGGGTTCACATCCTCTAGGGCCTGGGGAAGAGAAAAACATCTaGAACTTCAAATTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: DGGSDPLGPGGSHPLGPGEEKNI*NFKLRR
Trigger: CCTCCTCAATTTGAAGTTCAAGATGTTTTTCTCTTC...CCCAGGCCCTAGAGGATGTGAACCCCCAGGCCCTAGAGGATCTGAACCCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 90 bp TTACATCCACTTGGAACTTCCTTAAGAGCTCCCTCCTCCCAGGGATaGAGCATGCTGTCTTCAGTTCCATGGGGATGTTCTCTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LHPLGTSLRAPSSQG*SMLSSVPWGCSLLP
Trigger: TGGAAGCAGAGAACATCCCCATGGAACTGAAGACAGCATGCTGCATCCCTGGGAGGAGGGAGCTCTTAAGGAAGTTCCAAGTGGATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp AGAAGCCACAGGCGGGGAAATGGCCCTGTGATGGGAAGTGCCTGCTTTGGTGGACGTTATTTCCTCTGTTaGCAAATCTATCACAGAGAG +
Preference number: 5 (lower is better)
Translates to: RSHRRGNGPVMGSACFGGRYFLC*QIYHRE
Trigger: CTCTCTGTGATAGATTTGCAAACAGAGGAAATAACG...TCCACCAAAGCAGGCACTTCCCATCACAGGGCCATTTCCCCGCCTGTGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CCA 90 bp CCTTCACCCCACTCCAGGAACGTTCGCTACGCTAGGACTGCATCTTaGGAACAGAATTTTAGAGATGATCATCTCTTACATCAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: PSPHSRNVRYARTAS*EQNFRDDHLLHQKQ
Trigger: CTGCTTCTGATGTAAGAGATGATCATCTCTAAAATTCTGTTCCCAAGATGCAGTCCTAGCGTAGCGAACGTTCCTGGAGTGGGGTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp GACCAGAGTACTGGGCTACACAGTGGGAAATGGATACTCCTGGGACTGGGACACAAGACCAGAGAAGAGTaGGTTGAATGTGTAGATATA +
Preference number: 5 (lower is better)
Translates to: DQSTGLHSGKWILLGLGHKTREE*VECVDI
Trigger: TATATCTACACATTCAACCAACTCTTCTCTGGTCTT...GTGTCCCAGTCCCAGGAGTATCCATTTCCCACTGTGTAGCCCAGTACTCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CCA 90 bp AGAGATGATCATCTCTTACATCAGAAGCAGGATCTAAATGATCCCTaGATGCCCAATTTCCTGACCCTGCTATTGTTGTGGGTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: RDDHLLHQKQDLNDP*MPNFLTLLLLWVAR
Trigger: TCTTGCCACCCACAACAATAGCAGGGTCAGGAAATTGGGCATCCAGGGATCATTTAGATCCTGCTTCTGATGTAAGAGATGATCATCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp CACAAAACTATGAACCTAAGAATGCAAGAGATGAAGACTCACATTGGTTTACTGTTCCCTACACAGACCTaGCATGAACGAGGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: HKTMNLRMQEMKTHIGLLFPTQT*HERGLG
Trigger: CCCTAGCCCTCGTTCATGCAAGGTCTGTGTAGGGAA...CAGTAAACCAATGTGAGTCTTCATCTCTTGCATTCTTAGGTTCATAGTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp ACCAAGAAGAGGGACACGAGGATGCGTTATTTCCTCTGTTTGCAAATCTATCACCAGCATTGGGGGTGCTaGAGAAACATTGAATGTATC +
Preference number: 5 (lower is better)
Translates to: TKKRDTRMRYFLCLQIYHQHWGC*RNIECI
Trigger: GATACATTCAATGTTTCTCAAGCACCCCCAATGCTG...GTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp AGTTCCAGAGGAAATAGTGGCAATCTTTCAGGAGTTGGAAAGGGAAAGAGAAGACTGTGGTTTTTGTTGTaGCAGTTAGGGAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: SSRGNSGNLSGVGKGKRRLWFLL*QLGRDL
Trigger: CAAGTCTCTCCCTAACTGCAACAACAAAAACCACAG...TCTTCTCTTTCCCTTTCCAACTCCTGAAAGATTGCCACTATTTCCTCTGGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp TTGCAGTTAGGGAGAGACTTGGGGAGAAATTTGTGGGTAAGTTTTAGGCAAATTAGAAGCCTGTGGTTTTaGTTGTTGCAGTTAGGGAGA +
Preference number: 5 (lower is better)
Translates to: LQLGRDLGRNLWVSFRQIRSLWF*LLQLGR
Trigger: TCTCCCTAACTGCAACAACAAAAACCACAGGCTTCT...AATTTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp ACCAAGAAGAGGGACACGAGGATGCGTTATTTCCTCTGTTTGCAAATCTATCACTTCATATTCCCTCTTTaGTCCCATGGACATATTTCA +
Preference number: 5 (lower is better)
Translates to: TKKRDTRMRYFLCLQIYHFIFPL*SHGHIS
Trigger: TGAAATATGTCCATGGGACAAAAGAGGGAATATGAA...GTGATAGATTTGCAAACAGAGGAAATAACGCATCCTCGTGTCCCTCTTCTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp CACATTGGTTTACTGACTGATATAAACCACAATAATATGCACAGTGAGACAGGACAGTTAGGGAGAGACTaGGGGAGAAATTTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: HIGLLTDINHNNMHSETGQLGRD*GRNLWV
Trigger: TACCCACAAATTTCTCCCCAAGTCTCTCCCTAACTG...TCCTGTCTCACTGTGCATATTATTGTGGTTTATATCAGTCAGTAAACCAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS-3UTR CAA 90 bp GGAAAGAGAAGAGTCATTACAGGAGACACACAAAACTATGAACCTAAGAATGCAGACTTGGGGAGAAATTaGTGGGTAAGTTTTAGGCAA +
Preference number: 5 (lower is better)
Translates to: GKRRVITGDTQNYEPKNADLGRN*WVSFRQ
Trigger: TTGCCTAAAACTTACCCACAAATTTCTCCCCAAGTC...TGCATTCTTAGGTTCATAGTTTTGTGTGTCTCCTGTAATGACTCTTCTCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 72 bp CCTGGTAGCTGCCGGCGGCCTCCTGCAGCGGCGCCGTaGGGTGCGTCCTGTGCTCGGGGCCGGCGTCGCACA +
Preference number: 6 (lower is better)
Translates to: PGSCRRPPAAAP*GASCARGRRRT
Trigger: TGTGCGACGCCGGCCCCGAGCACAGGACGCACCGCACGGCGCCGCTGCAGGAGGCCGCCGGCAGCTACCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 72 bp TGCTGGACCAGCCGGCTCTTGCTCTCCCGCAGTCTCTaGAGCGTCGCTCGCTCCTCCGCCTCCAGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: CWTSRLLLSRSL*SVARSSASSRL
Trigger: GAGGCGGCTGGAGGCGGAGGAGCGAGCGACGCTGCAGAGACTGCGGGAGAGCAAGAGCCGGCTGGTCCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CCA 72 bp CCTCTCACACCCTCCAGCAGACCCAGGGCCGGGCGCTaGCACCTCTCCTGCAGCTCATCCGCCAGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: PLTPSSRPRAGR*HLSCSSSASSF
Trigger: GAAGGAGCTGGCGGATGAGCTGCAGGAGAGGTGCCAGCGCCCGGCCCTGGGTCTGCTGGAGGGTGTGAGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CAA 72 bp TCCTTCAGGGCCTTGCTCTGCTGGACCAGCCGGCTCTaGCTCTCCCGCAGTCTCTGCAGCGTCGCTCGCTCC +
Preference number: 6 (lower is better)
Translates to: SFRALLCWTSRL*LSRSLCSVARS
Trigger: GGAGCGAGCGACGCTGCAGAGACTGCGGGAGAGCAAGAGCCGGCTGGTCCAGCAGAGCAAGGCCCTGAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 72 bp TGGGGACATCCCTCCATGGTTCTCCATCCTGCACACTaGGCAGGTCGGCGGTCAAGAGCAGACTCGGGTGCG +
Preference number: 6 (lower is better)
Translates to: WGHPSMVLHPAH*AGRRSRADSGA
Trigger: CGCACCCGAGTCTGCTCTTGACCGCCGACCTGCGCAGTGTGCAGGATGGAGAACCATGGAGGGATGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CAA 90 bp TGCAAACCCAGGATGCAGGGCCATGTGTCAAATCGCTCAGGGTTGTaGGGGACATCCCTCCATGGTTCTCCATCCTGCACACTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: CKPRMQGHVSNRSGL*GTSLHGSPSCTLRR
Trigger: CCTGCGCAGTGTGCAGGATGGAGAACCATGGAGGGATGTCCCCAACAACCCTGAGCGATTTGACACATGGCCCTGCATCCTGGGTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CAA 90 bp CTCTGCAAACCCAGGATGCAGGGCCATGTGTCAAATCGCTCAGGGTaGTTGGGGACATCCCTCCATGGTTCTCCATCCTGCACACTGCGC +
Preference number: 6 (lower is better)
Translates to: LCKPRMQGHVSNRSG*LGTSLHGSPSCTLR
Trigger: GCGCAGTGTGCAGGATGGAGAACCATGGAGGGATGTCCCCAACAACCCTGAGCGATTTGACACATGGCCCTGCATCCTGGGTTTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 72 bp AGCTGCCGTTGCTCCTCCTGGGCCAGAAAGCCACGATaGTTCTCAAACTCCAATCTGAAGCGCTGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: SCRCSSWARKPR*FSNSNLKRCLC
Trigger: GCAGAGGCAGCGCTTCAGATTGGAGTTTGAGAAGCATCGTGGCTTTCTGGCCCAGGAGGAGCAACGGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CCA 72 bp GCCACAGGGCCCAGACCCCATTCTCAGGAGATGGCGTaGTTTCCCCCTTTCTTGGCAGTGTGTCTTGACAGA +
Preference number: 6 (lower is better)
Translates to: ATGPRPHSQEMA*FPPFLAVCLDR
Trigger: TCTGTCAAGACACACTGCCAAGAAAGGGGGAAACCACGCCATCTCCTGAGAATGGGGTCTGGGCCCTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CAA 72 bp CCCAGGATGCAGGGCCATGTGTCAAATCGCTCAGGGTaGTTGGGGACATCCCTCCATGGTTCTCCATCCTGC +
Preference number: 6 (lower is better)
Translates to: PRMQGHVSNRSG*LGTSLHGSPSC
Trigger: GCAGGATGGAGAACCATGGAGGGATGTCCCCAACAACCCTGAGCGATTTGACACATGGCCCTGCATCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CCA 72 bp GGATGCAGGGCCATGTGTCAAATCGCTCAGGGTTGTTaGGGACATCCCTCCATGGTTCTCCATCCTGCACAC +
Preference number: 6 (lower is better)
Translates to: GCRAMCQIAQGC*GHPSMVLHPAH
Trigger: GTGTGCAGGATGGAGAACCATGGAGGGATGTCCCCAACAACCCTGAGCGATTTGACACATGGCCCTGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CAA 72 bp AGGATGCAGGGCCATGTGTCAAATCGCTCAGGGTTGTaGGGGACATCCCTCCATGGTTCTCCATCCTGCACA +
Preference number: 6 (lower is better)
Translates to: RMQGHVSNRSGL*GTSLHGSPSCT
Trigger: TGTGCAGGATGGAGAACCATGGAGGGATGTCCCCAACAACCCTGAGCGATTTGACACATGGCCCTGCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 72 bp GCAGCATGCTGTCTTCAGTTCCATGGGGATGTTCTCTaGTTCCAGCCTTGTGACAGCCTTACTTCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: AACCLQFHGDVL*FQPCDSLTSAQ
Trigger: CTGAGCAGAAGTAAGGCTGTCACAAGGCTGGAAGCAGAGAACATCCCCATGGAACTGAAGACAGCATGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS GCA 72 bp CTTGGAACTTCCTTAAGAGCTCCCTCCTCCCAGGGATaGAGCATGCTGTCTTCAGTTCCATGGGGATGTTCT +
Preference number: 6 (lower is better)
Translates to: LGTSLRAPSSQG*SMLSSVPWGCS
Trigger: AGAACATCCCCATGGAACTGAAGACAGCATGCTGCATCCCTGGGAGGAGGGAGCTCTTAAGGAAGTTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS CCA 72 bp TCCAAGAAAATCCCAATGCAGCGAGGACTTTCCAGTTaGAGAAGAGGCACTGATGGGGAGGCAAGGACCATG +
Preference number: 6 (lower is better)
Translates to: SKKIPMQRGLSS*RRGTDGEARTM
Trigger: CATGGTCCTTGCCTCCCCATCAGTGCCTCTTCTCCAACTGGAAAGTCCTCGCTGCATTGGGATTTTCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366481.4
CDS TCA 72 bp TTCCAAATGACAGTCTTTTTCCCCACGTTGGCCTCCTaGGTCAAGGCGTCCTCCAACTCTTTCCTCATAAGT +
Preference number: 6 (lower is better)
Translates to: FQMTVFFPTLAS*VKASSNSFLIS
Trigger: ACTTATGAGGAAAGAGTTGGAGGACGCCTTGACTCAGGAGGCCAACGTGGGGAAAAAGACTGTCATTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366481.4