RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM56 (Homo sapiens)

Ensembl gene IDs: ENSG00000169871

Ensembl transcript IDs: ENST00000306085.11, ENST00000412507.1, ENST00000467847.1

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGCTGCCAGGCGGAGGGGCTCCTCACTTCTCAGACGGGGCGGCTaGGCAGAGACGCTCCTCACCTCCCAGACTGGGTCGCGGCCGGGC +
Preference number: 1 (lower is better)
Translates to: AAARRRGSSLLRRGG*AETLLTSQTGSRPG
Trigger: GCCCGGCCGCGACCCAGTCTGGGAGGTGAGGAGCGTCTCTGCCCAGCCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCTGGCAGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 90 bp CCCAGAGGGGGTGGCGGCCGGGCAGAGGCTGTAATCTCGGCACTTTaGGAGGCCAAGGCGGGCGGCTGGGAGGTGGAGGTTGTAGCTAGC +
Preference number: 1 (lower is better)
Translates to: PRGGGGRAEAVISAL*EAKAGGWEVEVVAS
Trigger: GCTAGCTACAACCTCCACCTCCCAGCCGCCCGCCTTGGCCTCCCAAAGTGCCGAGATTACAGCCTCTGCCCGGCCGCCACCCCCTCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR TCA 90 bp TCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTaGGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGG +
Preference number: 1 (lower is better)
Translates to: SGVAARACNRRHSAG*GRRIRQGGCSEPRW
Trigger: CCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCACGCCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 90 bp CCCTTCAGGAAAATGTCCTCGGCCTCCACCTCCCACGGACAGCTCTaGCTCCTTCCTGCCCTCTCCCTCCCCACTCCCTCTCACCCTAGT +
Preference number: 1 (lower is better)
Translates to: PFRKMSSASTSHGQL*LLPALSLPTPSHPS
Trigger: ACTAGGGTGAGAGGGAGTGGGGAGGGAGAGGGCAGGAAGGAGGCAGAGCTGTCCGTGGGAGGTGGAGGCCGAGGACATTTTCCTGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 90 bp CTTGCAGACCCTCCTGCAAGCTCACCCTGTACTACCGCCGGGGGATaGCGTGATCAAGGAGCATCCTGCCTGTGGCTGGCAGAAGAGGCC +
Preference number: 1 (lower is better)
Translates to: LADPPASSPCTTAGG*RDQGASCLWLAEEA
Trigger: GGCCTCTTCTGCCAGCCACAGGCAGGATGCTCCTTGATCACGGCATCCCCCGGCGGTAGTACAGGGTGAGCTTGCAGGAGGGTCTGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 90 bp CTACCGCCGGGGGATGCCGTGATCAAGGAGCATCCTGCCTGTGGCTaGCAGAAGAGGCCATTCACTGCCCATTCGAAATCTCAGGCCTCC +
Preference number: 1 (lower is better)
Translates to: LPPGDAVIKEHPACG*QKRPFTAHSKSQAS
Trigger: GGAGGCCTGAGATTTCGAATGGGCAGTGAATGGCCTCTTCTGCCAGCCACAGGCAGGATGCTCCTTGATCACGGCATCCCCCGGCGGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 90 bp GCCTTTGAACCTAACACCTCTTTGGCCCCAGCTGCTGTCTGCACTTaGAGACCCTCCTGCAAGCTCACCCTGTACTACCGCCGGGGGATG +
Preference number: 1 (lower is better)
Translates to: AFEPNTSLAPAAVCT*RPSCKLTLYYRRGM
Trigger: CATCCCCCGGCGGTAGTACAGGGTGAGCTTGCAGGAGGGTCTGCAAGTGCAGACAGCAGCTGGGGCCAAAGAGGTGTTAGGTTCAAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 90 bp AAAGGTCCGGTGGTCACAGCCCACCTCCGACGGGTTCCTCCCTTCTaGTTTGACACCTCTATCCGTCGCAGCCCCATTGCACCTTCTAGG +
Preference number: 1 (lower is better)
Translates to: KGPVVTAHLRRVPPF*FDTSIRRSPIAPSR
Trigger: CCTAGAAGGTGCAATGGGGCTGCGACGGATAGAGGTGTCAAACCAGAAGGGAGGAACCCGTCGGAGGTGGGCTGTGACCACCGGACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR TCA 90 bp CTCCAAGCCTACTTGCCCCCTCAATTCTACCACTGCCACCACTTATaGAAAGGTCCGGTGGTCACAGCCCACCTCCGACGGGTTCCTCCC +
Preference number: 1 (lower is better)
Translates to: LQAYLPPQFYHCHHL*KGPVVTAHLRRVPP
Trigger: GGGAGGAACCCGTCGGAGGTGGGCTGTGACCACCGGACCTTTTCATAAGTGGTGGCAGTGGTAGAATTGAGGGGGCAAGTAGGCTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 90 bp TCACCCTGTACTACCGCCGGGGGATGCCGTGATCAAGGAGCATCCTaGCTGTGGCTGGCAGAAGAGGCCATTCACTGCCCATTCGAAATC +
Preference number: 1 (lower is better)
Translates to: SPCTTAGGCRDQGAS*LWLAEEAIHCPFEI
Trigger: GATTTCGAATGGGCAGTGAATGGCCTCTTCTGCCAGCCACAGGCAGGATGCTCCTTGATCACGGCATCCCCCGGCGGTAGTACAGGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 90 bp TTCGCAGCCTTTGAACCTAACACCTCTTTGGCCCCAGCTGCTGTCTaGACTTGCAGACCCTCCTGCAAGCTCACCCTGTACTACCGCCGG +
Preference number: 1 (lower is better)
Translates to: FAAFEPNTSLAPAAV*TCRPSCKLTLYYRR
Trigger: CCGGCGGTAGTACAGGGTGAGCTTGCAGGAGGGTCTGCAAGTGCAGACAGCAGCTGGGGCCAAAGAGGTGTTAGGTTCAAAGGCTGCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 90 bp TGTACTACCGCCGGGGGATGCCGTGATCAAGGAGCATCCTGCCTGTaGCTGGCAGAAGAGGCCATTCACTGCCCATTCGAAATCTCAGGC +
Preference number: 1 (lower is better)
Translates to: CTTAGGCRDQGASCL*LAEEAIHCPFEISG
Trigger: GCCTGAGATTTCGAATGGGCAGTGAATGGCCTCTTCTGCCAGCCACAGGCAGGATGCTCCTTGATCACGGCATCCCCCGGCGGTAGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR TCA 90 bp TTTCTATTCCACAAAACCGCCATCGTCATCATGGCCCGTTCTCAATaGGCTGTTGGGTACACCTCCCAGACGGGGTGGTGGCCGGGCAGA +
Preference number: 1 (lower is better)
Translates to: FLFHKTAIVIMARSQ*AVGYTSQTGWWPGR
Trigger: TCTGCCCGGCCACCACCCCGTCTGGGAGGTGTACCCAACAGCTCATTGAGAACGGGCCATGATGACGATGGCGGTTTTGTGGAATAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 90 bp TGCCCCCTCAATTCTACCACTGCCACCACTTATGAAAAGGTCCGGTaGTCACAGCCCACCTCCGACGGGTTCCTCCCTTCTGGTTTGACA +
Preference number: 1 (lower is better)
Translates to: CPLNSTTATTYEKVR*SQPTSDGFLPSGLT
Trigger: TGTCAAACCAGAAGGGAGGAACCCGTCGGAGGTGGGCTGTGACCACCGGACCTTTTCATAAGTGGTGGCAGTGGTAGAATTGAGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 90 bp GACACCTCTATCCGTCGCAGCCCCATTGCACCTTCTAGGTTTTCTTaGCACCTCCAAGTTCCACTTGGCCTGCAGGGTTTAGCTGTTTCC +
Preference number: 1 (lower is better)
Translates to: DTSIRRSPIAPSRFS*HLQVPLGLQGLAVS
Trigger: GGAAACAGCTAAACCCTGCAGGCCAAGTGGAACTTGGAGGTGCCAAGAAAACCTAGAAGGTGCAATGGGGCTGCGACGGATAGAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR TCA 90 bp GCTGGCGCTCAGTCACTAGGCACCGACGTCCTGATTCCTCGTCTTTaGCCCAGTGTCCCTTGGTTGCTAAGTCAACCAGTTCTAACTTTC +
Preference number: 1 (lower is better)
Translates to: AGAQSLGTDVLIPRL*PSVPWLLSQPVLTF
Trigger: GAAAGTTAGAACTGGTTGACTTAGCAACCAAGGGACACTGGGTCAAAGACGAGGAATCAGGACGTCGGTGCCTAGTGACTGAGCGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 90 bp AGCGTGTTCCTGGTCTCTTTGTATCTGCGATATAACTGGGAACTCTaGCTTAGTCCTGAGCAGGGCTTTCTATCAGGTCCCCAGGCCACT +
Preference number: 1 (lower is better)
Translates to: SVFLVSLYLRYNWEL*LSPEQGFLSGPQAT
Trigger: AGTGGCCTGGGGACCTGATAGAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAGAGACCAGGAACACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 90 bp ATTTTTCTATCCTATGTACCTCTTCCCTCAGACTGGCTCCGTGGCTaGGTGGAGGGCTCCCCTGCTCTGACACTCATAACTTGGTATTTA +
Preference number: 1 (lower is better)
Translates to: IFLSYVPLPSDWLRG*VEGSPALTLITWYL
Trigger: TAAATACCAAGTTATGAGTGTCAGAGCAGGGGAGCCCTCCACGCAGCCACGGAGCCAGTCTGAGGGAAGAGGTACATAGGATAGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 90 bp CACCTTGGTCCCTATTCTCACACACTAGAAGACGGGTTAGCAGTTTaGCACTCCATGTTGAAAAGTTGCCAACCCCTGCCCTTCAGGAAA +
Preference number: 1 (lower is better)
Translates to: HLGPYSHTLEDGLAV*HSMLKSCQPLPFRK
Trigger: TTTCCTGAAGGGCAGGGGTTGGCAACTTTTCAACATGGAGTGCCAAACTGCTAACCCGTCTTCTAGTGTGTGAGAATAGGGACCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 90 bp GAGCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTaGAGATTTTACCTCCAAATTATGCTCAATGCAACACTTCCCATC +
Preference number: 1 (lower is better)
Translates to: EQGFLSGPQATQLRC*RFYLQIMLNATLPI
Trigger: GATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 90 bp GTGATTACAAGCGTGTTCCTGGTCTCTTTGTATCTGCGATATAACTaGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTATCAGGTCCC +
Preference number: 1 (lower is better)
Translates to: VITSVFLVSLYLRYN*ELCLSPEQGFLSGP
Trigger: GGGACCTGATAGAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAGAGACCAGGAACACGCTTGTAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 90 bp ACCTCTTCCCTCAGACTGGCTCCGTGGCTGCGTGGAGGGCTCCCCTaGTCTGACACTCATAACTTGGTATTTATTTATTTATTTATTTAT +
Preference number: 1 (lower is better)
Translates to: TSSLRLAPWLRGGLP*SDTHNLVFIYLFIY
Trigger: ATAAATAAATAAATAAATAAATACCAAGTTATGAGTGTCAGAGCAGGGGAGCCCTCCACGCAGCCACGGAGCCAGTCTGAGGGAAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 90 bp AAGCGATGGAGAATGTGGATTTTTGGACGTGAATTCTGTTGGGTTTaGTTTTCCAGTAGCCTATTCTCTTCGCAGCCTTTGAACCTAACA +
Preference number: 1 (lower is better)
Translates to: KRWRMWIFGREFCWV*FSSSLFSSQPLNLT
Trigger: TGTTAGGTTCAAAGGCTGCGAAGAGAATAGGCTACTGGAAAACCAAACCCAACAGAATTCACGTCCAAAAATCCACATTCTCCATCGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAGACTGGCTCCGTGGCTaGGTGGAGGGCTCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEDWLRG*VEGSPA
Trigger: AGCAGGGGAGCCCTCCACGCAGCCACGGAGCCAGTC...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTCCTCACCTCCCAGACTaGGTCGCGGCCGGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTPHLPD*VAAGQR
Trigger: CCTCTGCCCGGCCGCGACCCAGTCTGGGAGGTGAGG...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAACACTGCCACCACTTATaGAAAGGTCCGGTGGTCACA +
Preference number: 2 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEHCHHL*KGPVVT
Trigger: TGTGACCACCGGACCTTTTCATAAGTGGTGGCAGTG...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCCTCAGACTGGCTCCGTaGCTGCGTGGAGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLLRLAP*LRGGLP
Trigger: GGGGAGCCCTCCACGCAGCCACGGAGCCAGTCTGAG...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAGAAGAGGCCATTCACTaGCCATTCGAAATCTCAGGC +
Preference number: 2 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEEEAIH*PFEISG
Trigger: GCCTGAGATTTCGAATGGGCAGTGAATGGCCTCTTC...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATTCTCCAAGCCTACTTaGCCCCTCAATTCTACCACT +
Preference number: 2 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEFSKPT*PLNSTT
Trigger: AGTGGTAGAATTGAGGGGGCAAGTAGGCTTGGAGAA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGACTTCCCAGAGGGGGTaGCGGCCGGGCAGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLTSQRG*RPGRGC
Trigger: ACAGCCTCTGCCCGGCCGCCACCCCCTCTGGGAAGT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCCTCACTTCCCAGACTaGGCAGCCGGGCAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLPHFPD*AAGQRG
Trigger: GCCCCTCTGCCCGGCTGCCCAGTCTGGGAAGTGAGG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCTCAGACGGGGCGGCTaGGCAGAGACGCTCCTCACC +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLLRRGG*AETLLT
Trigger: GGTGAGGAGCGTCTCTGCCCAGCCGCCCCGTCTGAG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCGCCGGGGGATGCCGTaGTCAAGGAGCATCCTGCCT +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLRRGMP*SRSILP
Trigger: AGGCAGGATGCTCCTTGATCACGGCATCCCCCGGCG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAACTCCTGACCTTGAGTaGTCCACCCACCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILTPDLE*STHPSL
Trigger: GAGGCTGGGGTGGGTGGATCACTCAAGGTCAGGAGT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTAGCTCTGTTCCACAGTaGACACGCCTGACCCACCCT +
Preference number: 2 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTSSVPQ*TRLTHP
Trigger: AGGGTGGGTCAGGCGTGTGCACTGTGGAACAGAGCT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGACGCCTGACCCACCCTaGGCCCTTCTTGGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLTPDPP*ALLGPK
Trigger: CTTGGGGCCAAGAAGGGCCCAGGGTGGGTCAGGCGT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGGAGCATCCTGCCTGTaGCTGGCAGAAGAGGCCATT +
Preference number: 2 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTGASCL*LAEEAI
Trigger: AATGGCCTCTTCTGCCAGCCACAGGCAGGATGCTCC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTCCCACGGACAGCTCTaGCTCCTTCCTGCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFSHGQL*LLPALS
Trigger: GGAGAGGGCAGGAAGGAGGCAGAGCTGTCCGTGGGA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAATAGGCATGAGCCACTaGGCCTGGCAGAGCCTGGTT +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILIGMSH*AWQSLV
Trigger: AACCAGGCTCTGCCAGGCGCAGTGGCTCATGCCTAT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAACACCCAGGCTGGAGTaGAATGGGGTGAACTCGGCT +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILTPRLE*NGVNSA
Trigger: AGCCGAGTTCACCCCATTGCACTCCAGCCTGGGTGT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCCTCTTCCCTCAGACTaGCTCCGTGGCTGCGTGGAG +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLPLPSD*LRGCVE
Trigger: CTCCACGCAGCCACGGAGCCAGTCTGAGGGAAGAGG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTAGACTCCCCAGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTRLPSS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCCCAGCTACTGGGGAGTCT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 90 bp GGCTGGCGCTCAGTCACTAGGCACCGACGTCCTGATTCCTCGTCTTaGACCCAGTGTCCCTTGGTTGCTAAGTCAACCAGTTCTAACTTT +
Preference number: 2 (lower is better)
Translates to: GWRSVTRHRRPDSSS*TQCPLVAKSTSSNF
Trigger: AAAGTTAGAACTGGTTGACTTAGCAACCAAGGGACACTGGGTCAAAGACGAGGAATCAGGACGTCGGTGCCTAGTGACTGAGCGCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCTGGTCTCGAACTCCTaGCCTCAGGTCATCCACCCG +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLLVSNS*PQVIHP
Trigger: CGGGTGGATGACCTGAGGTCAGGAGTTCGAGACCAG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCCGTGGAGGGCTCCCCTaGTCTGACACTCATAACTTG +
Preference number: 2 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLRGGLP*SDTHNL
Trigger: CAAGTTATGAGTGTCAGAGCAGGGGAGCCCTCCACG...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCCATCCTGCCTGTGGCTaGCAGAAGAGGCCATTCACT +
Preference number: 2 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLHPACG*QKRPFT
Trigger: AGTGAATGGCCTCTTCTGCCAGCCACAGGCAGGATG...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTCCTCCAAGTTCCACTTaGCCTGCAGGGTTTAGCTGT +
Preference number: 2 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTPPSST*PAGFSC
Trigger: ACAGCTAAACCCTGCAGGCCAAGTGGAACTTGGAGG...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCTATGAAAAGGTCCGGTaGTCACAGCCCACCTCCGAC +
Preference number: 2 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLYEKVR*SQPTSD
Trigger: GTCGGAGGTGGGCTGTGACCACCGGACCTTTTCATA...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTTTTGGCACTCCATGTTaGAAAGTTGCCAACCCCTGC +
Preference number: 2 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTFGTPC*KVANPC
Trigger: GCAGGGGTTGGCAACTTTTCAACATGGAGTGCCAAA...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGAAAGCAAGAGGCAGGTaGACTCCCAGCATCCCCCTC +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLKARGR*TPSIPL
Trigger: GAGGGGGATGCTGGGAGTTCACCTGCCTCTTGCTTT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTACAGACAGAGCTGCAATaGAGACAGACACCGTTCCCT +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILQTELQ*RQTPFP
Trigger: AGGGAACGGTGTCTGTCTTCATTGCAGCTCTGTCTG...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGCTGCTGTCTGCACTTaGAGACCCTCCTGCAAGCTC +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFAAVCT*RPSCKL
Trigger: GAGCTTGCAGGAGGGTCTGCAAGTGCAGACAGCAGC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCTCTTTGGCCCCAGCTaGTGTCTGCACTTGCAGACC +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFLFGPS*CLHLQT
Trigger: GGTCTGCAAGTGCAGACAGCAGCTGGGGCCAAAGAG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAGGGTCTGGAATGCAGTaGTGCGATCATAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILGSGMQ*CDHSSL
Trigger: CAGTGAGCTATGATCGCACCACTGCATTCCAGACCC...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTACGGGTTCCTCCCTTCTaGTTTGACACCTCTATCCGT +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILRVPPF*FDTSIR
Trigger: ACGGATAGAGGTGTCAAACCAGAAGGGAGGAACCCG...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 90 bp CCACCTTGGTCCCTATTCTCACACACTAGAAGACGGGTTAGCAGTTaGGCACTCCATGTTGAAAAGTTGCCAACCCCTGCCCTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: PPWSLFSHTRRRVSS*ALHVEKLPTPALQE
Trigger: TTCCTGAAGGGCAGGGGTTGGCAACTTTTCAACATGGAGTGCCAAACTGCTAACCCGTCTTCTAGTGTGTGAGAATAGGGACCAAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTGCCTCCTCTGCTTCTaGGAGTTAAGGTCACGCCAC +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFCLLCF*ELRSRH
Trigger: GTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTCCTCCCTTCTGGTTTaGCACCTCTATCCGTCGCAG +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFSSLLV*HLYPSQ
Trigger: CTGCGACGGATAGAGGTGTCAAACCAGAAGGGAGGA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAATTAAGACCCCCTTCTaGCATCTCTCAACAGCCCCT +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILIKTPF*HLSTAP
Trigger: AGGGGCTGTTGAGAGATGGCAGAAGGGGGTCTTAAT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTTCAAGCGAGTCTCCTaGCTCAGACTCCCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFFKRVS*LRLPSS
Trigger: GCTACTGGGGAGTCTGAGGCAGGAGACTCGCTTGAA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCTTGGACTGCCACCCTaGCCCAATGGCCCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSLGLPP*PNGPAS
Trigger: GGAGGCAGGGCCATTGGGGCAGGGTGGCAGTCCAAG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCGACGGGTTAGCAGTTTaGCACTCCATGTTGAAAAGT +
Preference number: 2 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFDGLAV*HSMLKS
Trigger: ACTTTTCAACATGGAGTGCCAAACTGCTAACCCGTC...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTCCTCACTTCCTAGATaGGATGGCGGCCAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFSSLPR*DGGQEE
Trigger: CTCTTCCTGGCCGCCATCCCATCTAGGAAGTGAGGA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 90 bp TTCTGTTGGGTTTGGTTTTCCAGTAGCCTATTCTCTTCGCAGCCTTaGAACCTAACACCTCTTTGGCCCCAGCTGCTGTCTGCACTTGCA +
Preference number: 2 (lower is better)
Translates to: FCWVWFSSSLFSSQP*NLTPLWPQLLSALA
Trigger: TGCAAGTGCAGACAGCAGCTGGGGCCAAAGAGGTGTTAGGTTCAAAGGCTGCGAAGAGAATAGGCTACTGGAAAACCAAACCCAACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 90 bp TTCTTGCAGCCAGGTGACGTTTCATTTCTGAAGGTTTCTATTGTTTaGCCCCCTGGGTGGGCCACGTGGCTAGAATCATTTCACCAGCCA +
Preference number: 2 (lower is better)
Translates to: FLQPGDVSFLKVSIV*PPGWATWLESFHQP
Trigger: TGGCTGGTGAAATGATTCTAGCCACGTGGCCCACCCAGGGGGCAAAACAATAGAAACCTTCAGAAATGAAACGTCACCTGGCTGCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 90 bp ACTAGGCACCGACGTCCTGATTCCTCGTCTTTGACCCAGTGTCCCTaGGTTGCTAAGTCAACCAGTTCTAACTTTCTCTGGAGACAAGTC +
Preference number: 2 (lower is better)
Translates to: TRHRRPDSSSLTQCP*VAKSTSSNFLWRQV
Trigger: GACTTGTCTCCAGAGAAAGTTAGAACTGGTTGACTTAGCAACCAAGGGACACTGGGTCAAAGACGAGGAATCAGGACGTCGGTGCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGACACGGCAACAATCTaGTTTCTCTATCTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTDTATI*FLYLFP
Trigger: GGGGAAAAGATAGAGAAATCAGATTGTTGCCGTGTC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCTCAAGCAATCCTCCTaGCACAGACTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFLKQSS*HRLPKC
Trigger: GCACTTTGGGAGTCTGTGGCAGGAGGATTGCTTGAG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGCGATCATAGCTCACTaGAGACTCAAACTCCTCGGC +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLAIIAH*RLKLLG
Trigger: GCCGAGGAGTTTGAGTCTGCAGTGAGCTATGATCGC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGCTCGCTGCACCCTCTaGCTCCCAGGTTCAAGCGAG +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSARCTL*LPGSSE
Trigger: CTCGCTTGAACCTGGGAGGCAGAGGGTGCAGCGAGC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCAGCGGTTCCTTGGACTaGCACCCTGCCCCAATGGCC +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSSGSLD*HPAPMA
Trigger: GGCCATTGGGGCAGGGTGGCAGTCCAAGGAACCGCT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGAGGTTTCTATTGTTTTaGCCCCTGGGTGGGCCACGT +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLRFLLF*PLGGPR
Trigger: ACGTGGCCCACCCAGGGGGCAAAACAATAGAAACCT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 90 bp TCAGCCTCCCTAAGTGCTGTGATTACAAGCGTGTTCCTGGTCTCTTaGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAG +
Preference number: 2 (lower is better)
Translates to: SASLSAVITSVFLVS*YLRYNWELCLSPEQ
Trigger: CTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAGAGACCAGGAACACGCTTGTAATCACAGCACTTAGGGAGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGTCCATGTTGAAAAGTTaGCAACCCCTGCCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLSMLKS*QPLPFR
Trigger: CCTGAAGGGCAGGGGTTGGCAACTTTTCAACATGGA...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACTACCGCCGGGGGATaGCGTGATCAAGGAGCATCC +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTTAGG*RDQGAS
Trigger: GGATGCTCCTTGATCACGGCATCCCCCGGCGGTAGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCCTCTACCTATGCCCTaGACATTCCATCTGGACTTG +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLPLPMP*TFHLDL
Trigger: CAAGTCCAGATGGAATGTGCAGGGCATAGGTAGAGG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGTCACAGTGCTGGCTCTaGAGACAGAGCTGCAATGAA +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLSQCWL*RQSCNE
Trigger: TTCATTGCAGCTCTGTCTGCAGAGCCAGCACTGTGA...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCAACAGGAGTGACCACTaGACCTGGCTCAGTCTCATT +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFNRSDH*TWLSLI
Trigger: AATGAGACTGAGCCAGGTGCAGTGGTCACTCCTGTT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGCTCGAGCAATCTTCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSARAIF*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGAAGATTGCTCGAGC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTCTGGTTCCCACGAATaGCCCACTGTCCACAGTCCC +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSSGSHE*PTVHSP
Trigger: GGGACTGTGGACAGTGGGGCATTCGTGGGAACCAGA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGTTTTCCCTCTACCTATaGCCTGCACATTCCATCTGG +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLFSLYL*PAHSIW
Trigger: CCAGATGGAATGTGCAGGGCATAGGTAGAGGGAAAA...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCCGAGATCACGACACTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSPRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGTCGTGATCTCGG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGCAACTCCGGAGAGCTaGTGTTTCCACCCCAAGGTG +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSATPES*CFHPKV
Trigger: CACCTTGGGGTGGAAACAGCAGCTCTCCGGAGTTGC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCCCTCCATCTTACAATaGCCTGTGGATTCTTACAGC +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLPSILQ*PVDSYS
Trigger: GCTGTAAGAATCCACAGGGCATTGTAAGATGGAGGG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCCTGCACATTCCATCTaGACTTGTCCAAAATCCCTC +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLPAHSI*TCPKSL
Trigger: GAGGGATTTTGGACAAGTCCAGATGGAATGTGCAGG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGCAACTTCCACCTCCTaGGTTCAAATGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLATSTS*VQMILL
Trigger: CAGGAGAATCATTTGAACCCAGGAGGTGGAAGTTGC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAGATCCCTATTCTAGTTaGTCCTGTAGAAACTCCACT +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILDPYSS*SCRNST
Trigger: AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATC...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTATATCAGGAATGGTTTTaGAGAATGCAAAGCAGGACA +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILYQEWF*RMQSRT
Trigger: TGTCCTGCTTTGCATTCTTCAAAACCATTCCTGATA...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAATCTTAGCTGAGAAGTaGTGGATAACCTGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILILAEK*WITCFF
Trigger: GAAAAAGCAGGTTATCCATCACTTCTCAGCTAAGAT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAGCTTATGTGGTTCTTTaGCCAAATACTGTTCTAGTC +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILAYVVL*PNTVLV
Trigger: GACTAGAACAGTATTTGGTCAAAGAACCACATAAGC...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGTTACTAGTCCTTGCCTaGATACATTTCCTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLLLVLA*IHFLQG
Trigger: ACCCTGGAGGAAATGTATGCAGGCAAGGACTAGTAA...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGAGGTATCACAGTGCTaGCTCTGCAGACAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSEVSQC*LCRQSC
Trigger: GCAGCTCTGTCTGCAGAGCCAGCACTGTGATACCTC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACTTGCAGACCCTCCTaGAAGCTCACCCTGTACTAC +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTCRPS*KLTLYY
Trigger: GTAGTACAGGGTGAGCTTGCAGGAGGGTCTGCAAGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTATCGTCAAATCAATTCTaGATGGTTTTCCCATCTTCT +
Preference number: 2 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILSSNQF*MVFPSS
Trigger: AGAAGATGGGAAAACCATGCAGAATTGATTTGACGA...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCAACCTAACACCTCTTTaGCCCCAGCTGCTGTCTGCA +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSNLTPL*PQLLSA
Trigger: TGCAGACAGCAGCTGGGGCCAAAGAGGTGTTAGGTT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGAAGGCTGAGAAGCGATaGAGAATGTGGATTTTTGGA +
Preference number: 2 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLKAEKR*RMWIFG
Trigger: TCCAAAAATCCACATTCTCCATCGCTTCTCAGCCTT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACTGAGCACCTACTATaGGGTATCACAGTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTEHLL*GITVLA
Trigger: AGCCAGCACTGTGATACCTCATAGTAGGTGCTCAGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCAAGCGATGGAGAATGTaGATTTTTGGACGTGAATTC +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFKRWRM*IFGREF
Trigger: GAATTCACGTCCAAAAATCCACATTCTCCATCGCTT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 90 bp TACACGCTTATGCTGATGGAGGGGTATCAGGTGGGTACAAGTCAGTaGAAACTTTTCCTAACCAACACCTTGTATTTGAGCTTTATGGTG +
Preference number: 2 (lower is better)
Translates to: YTLMLMEGYQVGTSQ*KLFLTNTLYLSFMV
Trigger: CACCATAAAGCTCAAATACAAGGTGTTGGTTAGGAAAAGTTTCAACTGACTTGTACCCACCTGATACCCCTCCATCAGCATAAGCGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCTTCTTGCAGCCAGGTaGCGTTTCATTTCTGAAGGT +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSLLAAR*RFISEG
Trigger: ACCTTCAGAAATGAAACGTCACCTGGCTGCAAGAAG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCAAAGTTGCCAACCCCTaGCCTTCAGGAAAATGTCCT +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSKVANP*PSGKCP
Trigger: AGGACATTTTCCTGAAGGGCAGGGGTTGGCAACTTT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTTTACCTCCAAATTATaGTCAATGCAACACTTCCCA +
Preference number: 2 (lower is better)
Translates to: LCICDITGNSALVLSRAFFTSKL*SMQHFP
Trigger: TGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAAA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGAGGTGGGAAAGCTTTaGAGAGTCATACCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSEVGKL*RVIPVS
Trigger: TGAGACTGGTATGACTCTCCAAAGCTTTCCCACCTC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCCTTCTAGGTTTTCTTaGCACCTCCAAGTTCCACTT +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSPSRFS*HLQVPL
Trigger: AAGTGGAACTTGGAGGTGCCAAGAAAACCTAGAAGG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTCTCTCAACAGCCCCTaGCTAAAAACATTCTCCAAG +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSSLNSP*LKTFSK
Trigger: CTTGGAGAATGTTTTTAGCCAGGGGCTGTTGAGAGA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGTGGATTTTTGGACGTaGATTCTGTTGGGTTTGGTT +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSVDFWT*ILLGLV
Trigger: AACCAAACCCAACAGAATTCACGTCCAAAAATCCAC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR TCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACACTTGATCTTAGCTaGGAAGTGATGGATAACCTG +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTLDLS*EVMDNL
Trigger: CAGGTTATCCATCACTTCTCAGCTAAGATCAAGTGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACCGTGCCTGGCGCTTaGTTTTCTTATAATCTTCAT +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTVPGA*FSYNLH
Trigger: ATGAAGATTATAAGAAAACCAAGCGCCAGGCACGGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCCATTTAACCCTGAGTaGACACAGCACATATTTCAG +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSPFNPE*TQHIFQ
Trigger: CTGAAATATGTGCTGTGTCCACTCAGGGTTAAATGG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGAATTCTGTTGGGTTTaGTTTTCCAGTAGCCTATTC +
Preference number: 2 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSEFCWV*FSSSLF
Trigger: GAATAGGCTACTGGAAAACCAAACCCAACAGAATTC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR TCA 72 bp GCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTaGGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAG +
Preference number: 3 (lower is better)
Translates to: AARACNRRHSAG*GRRIRQGGCSE
Trigger: CTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 72 bp TTGGCCCCAGCTGCTGTCTGCACTTGCAGACCCTCCTaGAAGCTCACCCTGTACTACCGCCGGGGGATGCCG +
Preference number: 3 (lower is better)
Translates to: LAPAAVCTCRPS*KLTLYYRRGMP
Trigger: CGGCATCCCCCGGCGGTAGTACAGGGTGAGCTTGCAGGAGGGTCTGCAAGTGCAGACAGCAGCTGGGGCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 72 bp CCTCCTGCAAGCTCACCCTGTACTACCGCCGGGGGATaGCGTGATCAAGGAGCATCCTGCCTGTGGCTGGCA +
Preference number: 3 (lower is better)
Translates to: PPASSPCTTAGG*RDQGASCLWLA
Trigger: TGCCAGCCACAGGCAGGATGCTCCTTGATCACGGCATCCCCCGGCGGTAGTACAGGGTGAGCTTGCAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR TCA 72 bp TGCAAGCTCACCCTGTACTACCGCCGGGGGATGCCGTaGTCAAGGAGCATCCTGCCTGTGGCTGGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: CKLTLYYRRGMP*SRSILPVAGRR
Trigger: TCTTCTGCCAGCCACAGGCAGGATGCTCCTTGATCACGGCATCCCCCGGCGGTAGTACAGGGTGAGCTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR TCA 72 bp CACAGCCCACCTCCGACGGGTTCCTCCCTTCTGGTTTaGCACCTCTATCCGTCGCAGCCCCATTGCACCTTC +
Preference number: 3 (lower is better)
Translates to: HSPPPTGSSLLV*HLYPSQPHCTF
Trigger: GAAGGTGCAATGGGGCTGCGACGGATAGAGGTGTCAAACCAGAAGGGAGGAACCCGTCGGAGGTGGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR TCA 72 bp AGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTaGGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGC +
Preference number: 3 (lower is better)
Translates to: RLRQENQAGRLQ*AEMAAVQSSFG
Trigger: GCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 72 bp GCCGGGGGATGCCGTGATCAAGGAGCATCCTGCCTGTaGCTGGCAGAAGAGGCCATTCACTGCCCATTCGAA +
Preference number: 3 (lower is better)
Translates to: AGGCRDQGASCL*LAEEAIHCPFE
Trigger: TTCGAATGGGCAGTGAATGGCCTCTTCTGCCAGCCACAGGCAGGATGCTCCTTGATCACGGCATCCCCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 72 bp GTGGTCACAGCCCACCTCCGACGGGTTCCTCCCTTCTaGTTTGACACCTCTATCCGTCGCAGCCCCATTGCA +
Preference number: 3 (lower is better)
Translates to: VVTAHLRRVPPF*FDTSIRRSPIA
Trigger: TGCAATGGGGCTGCGACGGATAGAGGTGTCAAACCAGAAGGGAGGAACCCGTCGGAGGTGGGCTGTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 72 bp CCTAACACCTCTTTGGCCCCAGCTGCTGTCTGCACTTaGAGACCCTCCTGCAAGCTCACCCTGTACTACCGC +
Preference number: 3 (lower is better)
Translates to: PNTSLAPAAVCT*RPSCKLTLYYR
Trigger: GCGGTAGTACAGGGTGAGCTTGCAGGAGGGTCTGCAAGTGCAGACAGCAGCTGGGGCCAAAGAGGTGTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 72 bp CCCTACAGTACACGGTTCCCAGTTACCCCCTCCACATaGACAGAAGCGGGACACCCCGATCTCATCTCTCCC +
Preference number: 3 (lower is better)
Translates to: PYSTRFPVTPST*TEAGHPDLISP
Trigger: GGGAGAGATGAGATCGGGGTGTCCCGCTTCTGTGCATGTGGAGGGGGTAACTGGGAACCGTGTACTGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGGGGGACCCCGACCTTaGCAAACCTTCCCAGAGCGG +
Preference number: 3 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTGGPRP*QTFPER
Trigger: CCGCTCTGGGAAGGTTTGCAAAGGTCGGGGTCCCCC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 72 bp TCCTATGTACCTCTTCCCTCAGACTGGCTCCGTGGCTaGGTGGAGGGCTCCCCTGCTCTGACACTCATAACT +
Preference number: 3 (lower is better)
Translates to: SYVPLPSDWLRG*VEGSPALTLIT
Trigger: AGTTATGAGTGTCAGAGCAGGGGAGCCCTCCACGCAGCCACGGAGCCAGTCTGAGGGAAGAGGTACATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 72 bp TCTATCCTATGTACCTCTTCCCTCAGACTGGCTCCGTaGCTGCGTGGAGGGCTCCCCTGCTCTGACACTCAT +
Preference number: 3 (lower is better)
Translates to: SILCTSSLRLAP*LRGGLPCSDTH
Trigger: ATGAGTGTCAGAGCAGGGGAGCCCTCCACGCAGCCACGGAGCCAGTCTGAGGGAAGAGGTACATAGGATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR TCA 72 bp TACTTGCCCCCTCAATTCTACCACTGCCACCACTTATaGAAAGGTCCGGTGGTCACAGCCCACCTCCGACGG +
Preference number: 3 (lower is better)
Translates to: YLPPQFYHCHHL*KGPVVTAHLRR
Trigger: CCGTCGGAGGTGGGCTGTGACCACCGGACCTTTTCATAAGTGGTGGCAGTGGTAGAATTGAGGGGGCAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 72 bp GGGGATGCCGTGATCAAGGAGCATCCTGCCTGTGGCTaGCAGAAGAGGCCATTCACTGCCCATTCGAAATCT +
Preference number: 3 (lower is better)
Translates to: GDAVIKEHPACG*QKRPFTAHSKS
Trigger: AGATTTCGAATGGGCAGTGAATGGCCTCTTCTGCCAGCCACAGGCAGGATGCTCCTTGATCACGGCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTAGCTGCTGTCTGCACTaGCAGACCCTCCTGCAAGCT +
Preference number: 3 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTSCCLH*QTLLQA
Trigger: AGCTTGCAGGAGGGTCTGCAAGTGCAGACAGCAGCT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAACATTCCATCTGGACTaGTCCAAAATCCCTCTGGTT +
Preference number: 3 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQETFHLD*SKIPLV
Trigger: AACCAGAGGGATTTTGGACAAGTCCAGATGGAATGT...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 72 bp AATTCTACCACTGCCACCACTTATGAAAAGGTCCGGTaGTCACAGCCCACCTCCGACGGGTTCCTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: NSTTATTYEKVR*SQPTSDGFLPS
Trigger: AGAAGGGAGGAACCCGTCGGAGGTGGGCTGTGACCACCGGACCTTTTCATAAGTGGTGGCAGTGGTAGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR TCA 72 bp CAGTCACTAGGCACCGACGTCCTGATTCCTCGTCTTTaGCCCAGTGTCCCTTGGTTGCTAAGTCAACCAGTT +
Preference number: 3 (lower is better)
Translates to: QSLGTDVLIPRL*PSVPWLLSQPV
Trigger: AACTGGTTGACTTAGCAACCAAGGGACACTGGGTCAAAGACGAGGAATCAGGACGTCGGTGCCTAGTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGGTCACGCCACCACCTaGGTCCCTATTCTCACACAC +
Preference number: 3 (lower is better)
Translates to: LCICDITGNSALVLSRAFGHATT*VPILTH
Trigger: GTGTGTGAGAATAGGGACCAAGGTGGTGGCGTGACC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGAACCTAACACCTCTTaGGCCCCAGCTGCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: LCICDITGNSALVLSRAFEPNTS*APAAVC
Trigger: GCAGACAGCAGCTGGGGCCAAAGAGGTGTTAGGTTC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTACCGAAGCAGAAGCGTaGGAGCCTAGAGATTTTTCT +
Preference number: 3 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTTEAEA*EPRDFS
Trigger: AGAAAAATCTCTAGGCTCCAACGCTTCTGCTTCGGT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCCACAAGCCGAGGTTTaGGAGGTGGGAAAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: LCICDITGNSALVLSRAFPQAEV*EVGKLW
Trigger: CCAAAGCTTTCCCACCTCCAAAACCTCGGCTTGTGG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTATGTGGGACTATCTTCTaGCAGCCAGGTGACGTTTCA +
Preference number: 3 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILCGTIF*QPGDVS
Trigger: TGAAACGTCACCTGGCTGCAAGAAGATAGTCCCACA...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 72 bp CCCTATTCTCACACACTAGAAGACGGGTTAGCAGTTTaGCACTCCATGTTGAAAAGTTGCCAACCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: PYSHTLEDGLAV*HSMLKSCQPLP
Trigger: GGGCAGGGGTTGGCAACTTTTCAACATGGAGTGCCAAACTGCTAACCCGTCTTCTAGTGTGTGAGAATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 72 bp CTACTGGAGATTCCCCACAAGCCGAGGTTTTGGAGGTaGGAAAGCTTTGGAGAGTCATACCAGTCTCATCCT +
Preference number: 3 (lower is better)
Translates to: LLEIPHKPRFWR*ESFGESYQSHP
Trigger: AGGATGAGACTGGTATGACTCTCCAAAGCTTTCCCACCTCCAAAACCTCGGCTTGTGGGGAATCTCCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCTCCATGTTGAAAAGTaGCCAACCCCTGCCCTTCAG +
Preference number: 3 (lower is better)
Translates to: LCICDITGNSALVLSRAFLHVEK*PTPALQ
Trigger: CTGAAGGGCAGGGGTTGGCAACTTTTCAACATGGAG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAAGACGGGTTAGCAGTTaGGCACTCCATGTTGAAAAG +
Preference number: 3 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILRRVSS*ALHVEK
Trigger: CTTTTCAACATGGAGTGCCAAACTGCTAACCCGTCT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 72 bp CTCAGACTGGCTCCGTGGCTGCGTGGAGGGCTCCCCTaGTCTGACACTCATAACTTGGTATTTATTTATTTA +
Preference number: 3 (lower is better)
Translates to: LRLAPWLRGGLP*SDTHNLVFIYL
Trigger: TAAATAAATAAATACCAAGTTATGAGTGTCAGAGCAGGGGAGCCCTCCACGCAGCCACGGAGCCAGTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 72 bp CTGGTCTCTTTGTATCTGCGATATAACTGGGAACTCTaGCTTAGTCCTGAGCAGGGCTTTCTATCAGGTCCC +
Preference number: 3 (lower is better)
Translates to: LVSLYLRYNWEL*LSPEQGFLSGP
Trigger: GGGACCTGATAGAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAGAGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 72 bp CTGTTTAGTGCAGAGCCAACACTCAACCCAGGTCTCTaGTCCCTCATTCTCTTCCCATTTCTTGACACCAAG +
Preference number: 3 (lower is better)
Translates to: LFSAEPTLNPGL*SLILFPFLDTK
Trigger: CTTGGTGTCAAGAAATGGGAAGAGAATGAGGGAGCAGAGACCTGGGTTGAGTGTTGGCTCTGCACTAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 72 bp ACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTaGACACAGCACATATTTCAGAGAGCACGGGGTTGG +
Preference number: 3 (lower is better)
Translates to: TSCTALNPFNPE*TQHIFQRARGW
Trigger: CCAACCCCGTGCTCTCTGAAATATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGAAGGAGAAGCTGATTaGCAGAAAGCTCTACTCGGG +
Preference number: 3 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLEGEAD*QKALLG
Trigger: CCCGAGTAGAGCTTTCTGCAAATCAGCTTCTCCTTC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGTTCTCTTCGCAGCCTTaGAACCTAACACCTCTTTGG +
Preference number: 3 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLFSSQP*NLTPLW
Trigger: CCAAAGAGGTGTTAGGTTCAAAGGCTGCGAAGAGAA...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTACCTGATTCTCCGTTTTaGAGGATTATGACTGTATCA +
Preference number: 3 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILPDSPF*RIMTVS
Trigger: TGATACAGTCATAATCCTCAAAAACGGAGAATCAGG...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTCCGTCGCAGCCCCATaGCACCTTCTAGGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSSVAAP*HLLGFL
Trigger: AAGAAAACCTAGAAGGTGCAATGGGGCTGCGACGGA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCAGAGGGAGAGGGACCTaGGTTTTCTTTCTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: LCICDITGNSALVLSRAFRGRGT*VFFLFF
Trigger: AAAGAAAAGAAAGAAAACCAAGGTCCCTCTCCCTCT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAAGCTTATGTGGTTCTTaGACCAAATACTGTTCTAGT +
Preference number: 3 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILSLCGS*TKYCSS
Trigger: ACTAGAACAGTATTTGGTCAAAGAACCACATAAGCT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGGAGGTGGGAAAGCTTaGGAGAGTCATACCAGTCTC +
Preference number: 3 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSGGGKA*ESHTSL
Trigger: GAGACTGGTATGACTCTCCAAAGCTTTCCCACCTCC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGTTTGGCACTCCATGTaGAAAAGTTGCCAACCCCTG +
Preference number: 3 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSVWHSM*KSCQPL
Trigger: CAGGGGTTGGCAACTTTTCAACATGGAGTGCCAAAC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCATTCTCCAAGCCTACTaGCCCCCTCAATTCTACCAC +
Preference number: 3 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSILQAY*PPQFYH
Trigger: GTGGTAGAATTGAGGGGGCAAGTAGGCTTGGAGAAT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CCA 72 bp AGAATGTGGATTTTTGGACGTGAATTCTGTTGGGTTTaGTTTTCCAGTAGCCTATTCTCTTCGCAGCCTTTG +
Preference number: 3 (lower is better)
Translates to: RMWIFGREFCWV*FSSSLFSSQPL
Trigger: CAAAGGCTGCGAAGAGAATAGGCTACTGGAAAACCAAACCCAACAGAATTCACGTCCAAAAATCCACATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR GCA 72 bp ACGGTGTTGGAGATTTTACCTCCAAATTATGCTCAATaGAACACTTCCCATCCATGCTTCTCATTTTCCAGT +
Preference number: 3 (lower is better)
Translates to: TVLEILPPNYAQ*NTSHPCFSFSS
Trigger: ACTGGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAAAATCTCCAACACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCAACAGTTTCCAGTTCTaGCCTGTAATATACAGAGCA +
Preference number: 3 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSNSFQF*PVIYRA
Trigger: TGCTCTGTATATTACAGGCAAGAACTGGAAACTGTT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAAGCCCTGCAGCTGCCTaGGCCGCTGTGCGATCGCCC +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESPAAA*AAVRSP
Trigger: GGGCGATCGCACAGCGGCTCAGGCAGCTGCAGGGCT...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAACTTCCCAGAGGGGGTaGCGGCCGGGCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQETSQRG*RPGRGC
Trigger: ACAGCCTCTGCCCGGCCGCCACCCCCTCTGGGAAGT...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAACCTTGCCTCCAGGAATaGACCGGGTGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEPCLQE*TGWPGC
Trigger: GCAGCCTGGCCACCCGGTTCATTCCTGGAGGCAAGG...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCCGACCCCACGAAATaGCCCTGGGGGCTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESDPTK*PWGLVV
Trigger: GACCACCAGCCCCCAGGGGCATTTCGTGGGGTCGGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAGGCAGGGCAGTGTCTTaGGTGCCCGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEGRAVS*VPAAAP
Trigger: TGGAGCAGCTGCGGGCACCCAAGACACTGCCCTGCC...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCGGGTGCTGGGGACACTaGGCCGCTTGGCGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFGCWGH*AAWRSR
Trigger: CCGGGAGCGCCAAGCGGCCCAGTGTCCCCAGCACCC...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCGCCTCCCCGGGGTGCTaGGGACACTGGGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFASPGC*GHWAAW
Trigger: CCAAGCGGCCCAGTGTCCCCAGCACCCCGGGGAGGC...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCCTCGTGGGGTGTCTaGGCCCTGTCCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESSWGV*ALSSSK
Trigger: CTTGGAGGAGGACAGGGCCCAGACACCCCACGAGGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCGCCCTGCCTCCTGGCTaGGCCCCGGCCGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLALPPG*APAGWD
Trigger: ATCCCACCCGGCCGGGGCTCAGCCAGGAGGCAGGGC...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTTGGCGGGTGCAGCGGTaGCCGTCGGCACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTWRVQR*PSAQAW
Trigger: CCAGGCCTGTGCCGACGGGCACCGCTGCACCCGCCA...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCTCCAGCCTGGGGCTaGACTCCACCCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESPAWG*TPPCLS
Trigger: TGAGAGACAGGGTGGAGTCCAGCCCCAGGCTGGAGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGATGGTGAGGGGGCCTaGGGCCTGGAGGCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTDGEGA*GLEAAV
Trigger: AACGGCGGCCTCCAGGCCTCAGGCCCCCTCACCATC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCTGCACAGCAACTGTaGGCAGGGCTGGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESAQQL*AGLAQE
Trigger: TTCCTGTGCCAGCCCTGCTCACAGTTGCTGTGCAGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCCCTCTCGCCCCAGGCTaGGTACCCGGCGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLPLAPG*VPGGRR
Trigger: CCTTCGCCCGCCGGGTACTCAGCCTGGGGCGAGAGG...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGCCCAGGGGCAGCCCTaGAGCTGCCTGAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTAQGQP*SCLSRC
Trigger: ACAGCGGCTCAGGCAGCTGCAGGGCTGCCCCTGGGC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCTGGTTCCCACGAATaGCCCACTGTCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESGSHE*PTVHSP
Trigger: GGGACTGTGGACAGTGGGGCATTCGTGGGAACCAGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCCTCTTTTGGGGTCTaGGCTCCATCTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESSFGV*APSPAW
Trigger: CCAGGCTGGAGATGGAGCCCAGACCCCAAAAGAGGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCCCGCCACCGCGTGGCTaGCCTGGGAGAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLPPPRG*PGRGSG
Trigger: CCCTGAGCCTCTCCCAGGCCAGCCACGCGGTGGCGG...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCCCTCACTTCCCAGACTaGGCAGCCGGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFPHFPD*AAGQRG
Trigger: GCCCCTCTGCCCGGCTGCCCAGTCTGGGAAGTGAGG...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCTGTGGGTCTGGCGGGTaGAGCGGTGCCCGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLCGSGG*SGARRH
Trigger: GTGCCGACGGGCACCGCTGCACCCGCCAGACCCACA...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCCTGCCTGAGCCGCTGTaGGATCGCCCCTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFLPEPL*DRPFQG
Trigger: TCCCTGGAAGGGGCGATCGCACAGCGGCTCAGGCAG...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATTCCACCCCAAGGTGTaGGATCCCCTACAGTACACG +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEFHPKV*DPLQYT
Trigger: CGTGTACTGTAGGGGATCGCACACCTTGGGGTGGAA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAGACAGCCGAAGAAGGTaGCAGTTCTTGTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEDSRRR*QFLSRS
Trigger: GCTCCTGGACAAGAACTGCCACCTTCTTCGGCTGTC...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAAGTGCCGCCACCGCGTaGCTGGCCTGGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILSAATA*LAWERL
Trigger: GAGCCTCTCCCAGGCCAGCCACGCGGTGGCGGCACT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCCCTCACCTCCCAGACTaGGTCGCGGCCGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLPHLPD*VAAGQR
Trigger: CCTCTGCCCGGCCGCGACCCAGTCTGGGAGGTGAGG...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATATTGTTTTGCCCCCTaGGTGGGCCACGTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEYCFAP*VGHVAR
Trigger: TCTAGCCACGTGGCCCACCCAGGGGGCAAAACAATA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCTCTAGGGCGCCTGTaGGACTATCTTCTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESLGRL*DYLLAA
Trigger: GGCTGCAAGAAGATAGTCCCACAGGCGCCCTAGAGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAACTGATTCCTCGTCTTTaGCCCAGTGTCCCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQELIPRL*PSVPWL
Trigger: CAACCAAGGGACACTGGGTCAAAGACGAGGAATCAG...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAGCCGCCGTTGCTGGGTaGCTGGAAAAGAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEAAVAG*LEKKQN
Trigger: GTTTTGTTTCTTTTCCAGGCACCCAGCAACGGCGGC...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTATGCCCCAGCACCTCCTaGTTCTGGGCCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILCPSTS*FWASRA
Trigger: GGCCCTGCTGGCCCAGAAGCAGGAGGTGCTGGGGCA...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGCGGCCCTGGCCACCTaGTCCCGGCCCTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLAALAT*SRPSSS
Trigger: GGAGCTTGAGGGCCGGGAGCAGGTGGCCAGGGCCGC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTAGGGCCCTGCGCCACTaGACTTCGCCGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTRALRH*TSPLGL
Trigger: CAACCCCAACGGCGAAGTGCAGTGGCGCAGGGCCCT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCTCCCACGGACAGCTCTaGCTCCTTCCTGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFSHGQL*LLPALS
Trigger: GGAGAGGGCAGGAAGGAGGCAGAGCTGTCCGTGGGA...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAACTCAAGCAATCCTCCTaGCACAGACTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQELKQSS*HRLPKC
Trigger: GCACTTTGGGAGTCTGTGGCAGGAGGATTGCTTGAG...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTCTTGGACTGCCACCCTaGCCCAATGGCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTLGLPP*PNGPAS
Trigger: GGAGGCAGGGCCATTGGGGCAGGGTGGCAGTCCAAG...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCCCGTCGGCACAGGCCTaGCACAAGTCATCGGCACAG +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFPSAQA*HKSSAQ
Trigger: CTGTGCCGATGACTTGTGCCAGGCCTGTGCCGACGG...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCGGTGGGTGTGGGTCTaGCGGGTGCAGCGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLRWVWV*RVQRCP
Trigger: CGGGCACCGCTGCACCCGCCAGACCCACACCCACCG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAAGGTCCACCACGCGGTaGGTGTGGGTCTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILRSTTR*VWVWRV
Trigger: CACCCGCCAGACCCACACCCACCGCGTGGTGGACCT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCTCGGCAGCCTCCACGTaGGCTCGTAGCTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLSAAST*ARSCPS
Trigger: GCTGGGGCAGCTACGAGCCCACGTGGAGGCTGCCGA...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAGCCCCTGGGGGCTGGTaGTCAGAAACACCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILAPGGW*SETPAP
Trigger: GGGCGCTGGTGTTTCTGACCACCAGCCCCCAGGGGC...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAAACCTAACACCTCTTTaGCCCCAGCTGCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQENLTPL*PQLLSA
Trigger: TGCAGACAGCAGCTGGGGCCAAAGAGGTGTTAGGTT...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAACGGGTTCCTCCCTTCTaGTTTGACACCTCTATCCGT +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQERVPPF*FDTSIR
Trigger: ACGGATAGAGGTGTCAAACCAGAAGGGAGGAACCCG...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCTGGGCCACTTGCTCTTaGGCTAAGGAGCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFWATCS*AKELPS
Trigger: GGAGGGCAGCTCCTTAGCTCAAGAGCAAGTGGCCCA...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCCTGGTCTCGAACTCCTaGCCTCAGGTCATCCACCCG +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFLVSNS*PQVIHP
Trigger: CGGGTGGATGACCTGAGGTCAGGAGTTCGAGACCAG...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCGGGCAGTGTCTTGGGTaGCCGCAGCTGCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLGQCLG*PQLLQA
Trigger: TGCCTGGAGCAGCTGCGGGCACCCAAGACACTGCCC...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTACGTGGGCTCGTAGCTaGCCCAGCACCTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTTWARS*PSTSCF
Trigger: GAAGCAGGAGGTGCTGGGGCAGCTACGAGCCCACGT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGCAGGGCGGCCACGCTaGAAGGGGAGCAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLAGRPR*KGSSPQ
Trigger: CTGAGGGCTGCTCCCCTTGCAGCGTGGCCGCCCTGC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCCATGTTGAAAAGTTaGCAACCCCTGCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESMLKS*QPLPFR
Trigger: CCTGAAGGGCAGGGGTTGGCAACTTTTCAACATGGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAACCTCTACCTATGCCCTaGACATTCCATCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEPLPMP*TFHLDL
Trigger: CAAGTCCAGATGGAATGTGCAGGGCATAGGTAGAGG...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCGCTCGAGCAATCTTCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFARAIF*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGAAGATTGCTCGAGC...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGAGGGGGCCTGAGGCCTaGAGGCCGCCGTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLRGPEA*RPPLLG
Trigger: ACCCAGCAACGGCGGCCTCCAGGCCTCAGGCCCCCT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCACCGCGTGGCTGGCCTaGGAGAGGCTCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFTAWLA*ERLRAL
Trigger: CAGGGCCCTGAGCCTCTCCCAGGCCAGCCACGCGGT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGGATGGTCCCGTTACTaGGGGACACGACCAGGTACC +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTGWSRY*GTRPGT
Trigger: GGTACCTGGTCGTGTCCCTCAGTAACGGGACCATCC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCAAGGCCACCGCGCTCTaGAGGGCGGCCACGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFKATAL*RAATLQ
Trigger: TTGCAGCGTGGCCGCCCTGCAGAGCGCGGTGGCCTT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCAGCGGTTCCTTGGACTaGCACCCTGCCCCAATGGCC +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLSGSLD*HPAPMA
Trigger: GGCCATTGGGGCAGGGTGGCAGTCCAAGGAACCGCT...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGTTACCCCCTCCACATaGACAGAAGCGGGACACCCC +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTVTPST*TEAGHP
Trigger: GGGGTGTCCCGCTTCTGTGCATGTGGAGGGGGTAAC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCGCAACTCCGGAGAGCTaGTGTTTCCACCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFATPES*CFHPKV
Trigger: CACCTTGGGGTGGAAACAGCAGCTCTCCGGAGTTGC...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAACTCAGCCTCCCTAAGTaGTGTGATTACAAGCGTGTT +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQELSLPK*CDYKRV
Trigger: AACACGCTTGTAATCACAGCACTTAGGGAGGCTGAG...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCCTCTCCTCACCTCCCTaGGTACCAGCTCCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFLSSPP*VPAPSF
Trigger: GAAAGACGGAGCTGGTACCCAGGGAGGTGAGGAGAG...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCTTCTCGGGTTGTCTaGGCTTTTTCCTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESSRVV*AFSSFG
Trigger: CCCAAAAGAGGAAAAAGCCCAGACAACCCGAGAAGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTCCCACGAAATGCCCCTaGGGGCTGGTGGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTPTKCP*GLVVRN
Trigger: GTTTCTGACCACCAGCCCCCAGGGGCATTTCGTGGG...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATGTGGTGCAGTGGGCTaGGGTAAAACATTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQECGAVG*GKTFCC
Trigger: ACAGCAAAATGTTTTACCCCAGCCCACTGCACCACA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp TGCCCTGTGGATTCTTACAGCTTCCCGAGAAGCCACTaGGCATCCCCATCTCTAGGGCGCCTGTGGGACTAT +
Preference number: 4 (lower is better)
Translates to: CPVDSYSFPRSH*ASPSLGRLWDY
Trigger: ATAGTCCCACAGGCGCCCTAGAGATGGGGATGCCAAGTGGCTTCTCGGGAAGCTGTAAGAATCCACAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCTGCCTCCTCTGCTTCTaGGAGTTAAGGTCACGCCAC +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFCLLCF*ELRSRH
Trigger: GTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCA...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGAGGCCAGGAAGTCGCTaGTCAGGGCCTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLRPGSR*SGPPGG
Trigger: CCCTCCTGGAGGCCCTGAGCAGCGACTTCCTGGCCT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCAGAGGCTCAGGGCCCTaGGCCACTGCACTTCGCCGT +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFRGSGP*ATALRR
Trigger: ACGGCGAAGTGCAGTGGCGCAGGGCCCTGAGCCTCT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAACTACCGCCGGGGGATaGCGTGATCAAGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILTTAGG*RDQGAS
Trigger: GGATGCTCCTTGATCACGGCATCCCCCGGCGGTAGT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGCTGCTGTCTGCACTTaGAGACCCTCCTGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTAAVCT*RPSCKL
Trigger: GAGCTTGCAGGAGGGTCTGCAAGTGCAGACAGCAGC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCTGCCCATGGCTCCCATaGAACTCCGGAGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLCPWLP*NSGELL
Trigger: CAGCAGCTCTCCGGAGTTGCATGGGAGCCATGGGCA...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTTCGCCTGTTCAACCCTaGCCAGCTCAGGTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTSPVQP*PAQVSN
Trigger: GTTGCTGACCTGAGCTGGGCAGGGTTGAACAGGCGA...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCAGGGGTGGTCCAGGTaGGGGTCTAGGCGGCACTCT +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFQGWSR*GSRRHS
Trigger: AGAGTGCCGCCTAGACCCCCACCTGGACCACCCCTG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTTCCTCCTCCAAGGTCTaGGCTCCCTCTTCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTSSSKV*APSSRV
Trigger: AACCCGAGAAGAGGGAGCCCAGACCTTGGAGGAGGA...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAAATGCCCCTGGGGGCTaGTGGTCAGAAACACCAGCG +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILNAPGG*WSETPA
Trigger: CGCTGGTGTTTCTGACCACCAGCCCCCAGGGGCATT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAGACGGGTTAGCAGTTTaGCACTCCATGTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEDGLAV*HSMLKS
Trigger: ACTTTTCAACATGGAGTGCCAAACTGCTAACCCGTC...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCACGCCTGACCCACCCTaGGCCCTTCTTGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFTPDPP*ALLGPK
Trigger: CTTGGGGCCAAGAAGGGCCCAGGGTGGGTCAGGCGT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCCATCCTGCCTGTGGCTaGCAGAAGAGGCCATTCACT +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFHPACG*QKRPFT
Trigger: AGTGAATGGCCTCTTCTGCCAGCCACAGGCAGGATG...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCTCTCAACAGCCCCTaGCTAAAAACATTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESLNSP*LKTFSK
Trigger: CTTGGAGAATGTTTTTAGCCAGGGGCTGTTGAGAGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCAGACTCCCCAGTAGCTaGGATTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFRLPSS*DYRHAP
Trigger: TGGCGCATGCCTGTAATCCCAGCTACTGGGGAGTCT...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp GTGCCCCCTACTGGAGATTCCCCACAAGCCGAGGTTTaGGAGGTGGGAAAGCTTTGGAGAGTCATACCAGTC +
Preference number: 4 (lower is better)
Translates to: VPPTGDSPQAEV*EVGKLWRVIPV
Trigger: GACTGGTATGACTCTCCAAAGCTTTCCCACCTCCAAAACCTCGGCTTGTGGGGAATCTCCAGTAGGGGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGGGCTCCCGGGAAATTaGCTTGAGCCTGCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTGLPGN*LEPAFE
Trigger: TTCAAAGGCAGGCTCAAGTCAATTTCCCGGGAGCCC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTCCTTGTAGTCGCCGTTaGGGGAGAAGCGTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTPCSRR*GRSVSV
Trigger: CACTGAAACGCTTCTCCCTCAACGGCGACTACAAGG...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAAAAGCAAGAGGCAGGTaGACTCCCAGCATCCCCCTC +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILKARGR*TPSIPL
Trigger: GAGGGGGATGCTGGGAGTTCACCTGCCTCTTGCTTT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTTCCTCCCTTCTGGTTTaGCACCTCTATCCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTSSLLV*HLYPSQ
Trigger: CTGCGACGGATAGAGGTGTCAAACCAGAAGGGAGGA...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCCAGACAGAGCTGCAATaGAGACAGACACCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFQTELQ*RQTPFP
Trigger: AGGGAACGGTGTCTGTCTTCATTGCAGCTCTGTCTG...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCCATACACGCTTATGCTaGTGGAGGGGTATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFHTRLC*WRGIRW
Trigger: CCACCTGATACCCCTCCATCAGCATAAGCGTGTATG...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTTTGGGTGCCCGCAGCTaGTCCAGGCAGATTTTACAG +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTLGARS*SRQILQ
Trigger: CTGTAAAATCTGCCTGGAGCAGCTGCGGGCACCCAA...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCTTCAGTGCCCGGTTCTaGTCATCCGCCACCAGGATC +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLFSARF*SSATRI
Trigger: GATCCTGGTGGCGGATGAGCAGAACCGGGCACTGAA...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGTGAACTCGGCTCGCTaGACCCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFVNSAR*TLCLPG
Trigger: ACCTGGGAGGCAGAGGGTGCAGCGAGCCGAGTTCAC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCGGAGGCCGCCGTTGCTaGGTGCCTGGAAAAGAAACA +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLGGRRC*VPGKET
Trigger: TGTTTCTTTTCCAGGCACCCAGCAACGGCGGCCTCC...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTCCAGGAGCCCAGGATaGAGCTCCAGCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFSRSPG*SSSCGS
Trigger: GCTCCCACAGCTGGAGCTCCATCCTGGGCTCCTGGA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTTGTACACCTCCACGTaGCCCGCCACGCTGACAGCC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFLYTST*PATLTA
Trigger: GGCTGTCAGCGTGGCGGGCCACGTGGAGGTGTACAA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGCAGCCATGCAGGCCTaGCCCCTTGTACTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFAAMQA*PLVLPN
Trigger: GTTGGGGAGTACAAGGGGCCAGGCCTGCATGGCTGC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTTCCTCACTTCCTAGATaGGATGGCGGCCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTSSLPR*DGGQEE
Trigger: CTCTTCCTGGCCGCCATCCCATCTAGGAAGTGAGGA...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATACATTTCAGCAAGCTaGCCATTGGTCCCTTCTATT +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEYISAS*PLVPSI
Trigger: AATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAATCTTAGCTGAGAAGTaGTGGATAACCTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEILAEK*WITCFF
Trigger: GAAAAAGCAGGTTATCCATCACTTCTCAGCTAAGAT...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCACTCCTGACCTTGAGTaGTCCACCCACCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFTPDLE*STHPSL
Trigger: GAGGCTGGGGTGGGTGGATCACTCAAGGTCAGGAGT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCCTCACAGCAGCTCTGTaGAGTGGGCATGTGGATGTC +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLLTAAL*SGHVDV
Trigger: GACATCCACATGCCCACTTCACAGAGCTGCTGTGAG...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCCTGGAGGCCGCCGTTaGTGGGTGCCTGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLPGGRR*WVPGKE
Trigger: TTCTTTTCCAGGCACCCAGCAACGGCGGCCTCCAGG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGCCATCCGCCAGCTGTaGCAGGCAGTCTTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFAIRQL*QAVLAV
Trigger: TACTGCCAAGACTGCCTGGCACAGCTGGCGGATGGC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTACCACACTATTCTGCTaGCAGTCCGACCCCACGAAA +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTTTLFC*QSDPTK
Trigger: TTTCGTGGGGTCGGACTGGCAGCAGAATAGTGTGGT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGGGGACCCCGACCTTTaGAAACCTTCCCAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLGDPDL*KPSQSG
Trigger: ACCGCTCTGGGAAGGTTTGCAAAGGTCGGGGTCCCC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCAGCTGGGACTACGGGTaGATGCCACCACCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFSWDYG*MPPPLA
Trigger: AGCCAGAGGTGGTGGCATGCACCCGTAGTCCCAGCT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGACCAGCCAGGACCACTaGCCATGGCTCCCATGCAAC +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLTSQDH*PWLPCN
Trigger: GTTGCATGGGAGCCATGGGCAGTGGTCCTGGCTGGT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGAGGGCGAGGACCCGTaGGAAACCATGCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFEGEDP*ETMLNG
Trigger: GCCATTCAGCATGGTTTCCCACGGGTCCTCGCCCTC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACCACGCGGTGGGTGTaGGTCTGGCGGGTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTTRWV*VWRVQR
Trigger: CCGCTGCACCCGCCAGACCCACACCCACCGCGTGGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGAACTGTGAGCAGGGCTaGCACAGGAAGCGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLNCEQG*HRKRSA
Trigger: GGCACTGCGCTTCCTGTGCCAGCCCTGCTCACAGTT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGGCTTTTTCCTCTTTTaGGGTCTGGGCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTGFFLF*GLGSIS
Trigger: GGAGATGGAGCCCAGACCCCAAAAGAGGAAAAAGCC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAAGTAAAAGATGGGTCTaGGGAGGAGGCCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILSKRWV*GGGQSR
Trigger: ACGGCTCTGGCCTCCTCCCCAGACCCATCTTTTACT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCCGGACCCGAAAGATGTaGATGGTCCCGTTACTGAGG +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLRTRKM*MVPLLR
Trigger: CCTCAGTAACGGGACCATCCACATCTTTCGGGTCCG...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTATATGAAAAGGTCCGGTaGTCACAGCCCACCTCCGAC +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILYEKVR*SQPTSD
Trigger: GTCGGAGGTGGGCTGTGACCACCGGACCTTTTCATA...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCTGCAGTGAGCCGAGATaGCAGCAGTACAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLCSEPR*QQYSPA
Trigger: AGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCA...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTCCCAGACGGGGTGGTaGCCGGGCAGAGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSSQTGW*PGRGAP
Trigger: AGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACCTCCCAGACGGGGTaGTGGCCGGGCAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTSQTG*WPGRGA
Trigger: AGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCGAGGTATCACAGTGCTaGCTCTGCAGACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLEVSQC*LCRQSC
Trigger: GCAGCTCTGTCTGCAGAGCCAGCACTGTGATACCTC...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCCCGAGGTTTTGGAGGTaGGAAAGCTTTGGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFPRFWR*ESFGES
Trigger: TGACTCTCCAAAGCTTTCCCACCTCCAAAACCTCGG...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCAGGACCACTGCCCATaGCTCCCATGCAACTCCGGA +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLQDHCP*LPCNSG
Trigger: TCCGGAGTTGCATGGGAGCCATGGGCAGTGGTCCTG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp TCAGTCACTAGGCACCGACGTCCTGATTCCTCGTCTTaGACCCAGTGTCCCTTGGTTGCTAAGTCAACCAGT +
Preference number: 4 (lower is better)
Translates to: SVTRHRRPDSSS*TQCPLVAKSTS
Trigger: ACTGGTTGACTTAGCAACCAAGGGACACTGGGTCAAAGACGAGGAATCAGGACGTCGGTGCCTAGTGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCGAAGAAGTTGGTCTTaGAGGAGGCCACACCCTCGG +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFRRSWS*RRPHPR
Trigger: CCGAGGGTGTGGCCTCCTTCAAGACCAACTTCTTCG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCTAGGCGGCACTCTCTaGACAGCAACTGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLLGGTL*TATVSR
Trigger: CCTGCTCACAGTTGCTGTGCAGAGAGTGCCGCCTAG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGGAGAAGCGTTTCAGTaGCCGGTTCTGCTCATCCGC +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLGEAFQ*PVLLIR
Trigger: GCGGATGAGCAGAACCGGGCACTGAAACGCTTCTCC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGATGAGATAGAGCCGTaGGCTAGCGGAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLDEIEP*ASGEGH
Trigger: GTGGCCTTCTCCGCTAGCGCACGGCTCTATCTCATC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCATTACCACACTATTCTaGTGCCAGTCCGACCCCACG +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLITTLF*CQSDPT
Trigger: CGTGGGGTCGGACTGGCAGCAGAATAGTGTGGTAAT...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCAAAGTTGCCAACCCCTaGCCTTCAGGAAAATGTCCT +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFKVANP*PSGKCP
Trigger: AGGACATTTTCCTGAAGGGCAGGGGTTGGCAACTTT...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGAGCTCTGTTCCACAGTaGACACGCCTGACCCACCCT +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLSSVPQ*TRLTHP
Trigger: AGGGTGGGTCAGGCGTGTGCACTGTGGAACAGAGCT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGACTGGCTCCGTGGCTaGGTGGAGGGCTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSDWLRG*VEGSPA
Trigger: AGCAGGGGAGCCCTCCACGCAGCCACGGAGCCAGTC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTATTAAGACCCCCTTCTaGCATCTCTCAACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTIKTPF*HLSTAP
Trigger: AGGGGCTGTTGAGAGATGGCAGAAGGGGGTCTTAAT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGACACCCAGGCTGGAGTaGAATGGGGTGAACTCGGCT +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLTPRLE*NGVNSA
Trigger: AGCCGAGTTCACCCCATTGCACTCCAGCCTGGGTGT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATTTACCTCCAAATTATaGTCAATGCAACACTTCCCA +
Preference number: 4 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEFTSKL*SMQHFP
Trigger: TGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAAA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCCACCCCTGTGGGGCTaGGGTCCTCCATCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSPPLWG*GPPSSW
Trigger: CCACGAGGATGGAGGACCCCAGCCCCACAGGGGTGG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGGTCTGCCACCCCTGTaGGGCTGGGGTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSGLPPL*GWGPPS
Trigger: GGATGGAGGACCCCAGCCCCACAGGGGTGGCAGACC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCCAGTGTTTGTGTCCCTaGGTACTTGAGATTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFQCLCP*VLEIRE
Trigger: CTCCCTAATCTCAAGTACCCAGGGACACAAACACTG...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCGAGGTGGGAAAGCTTTaGAGAGTCATACCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFEVGKL*RVIPVS
Trigger: TGAGACTGGTATGACTCTCCAAAGCTTTCCCACCTC...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGAGAAATGGGCTGGGCTaGCGCTCAGTCACTAGGCAC +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLRNGLG*RSVTRH
Trigger: GTGCCTAGTGACTGAGCGCCAGCCCAGCCCATTTCT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCTGTAGAGAAATGGGCTaGGCTGGCGCTCAGTCACTA +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLCREMG*AGAQSL
Trigger: TAGTGACTGAGCGCCAGCCCAGCCCATTTCTCTACA...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCACTGAGCACCTACTATaGGGTATCACAGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLTEHLL*GITVLA
Trigger: AGCCAGCACTGTGATACCTCATAGTAGGTGCTCAGT...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAGACAATCAGAGACCTTaGTCTTGGCACTCGCCTGTT +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILDNQRP*SWHSPV
Trigger: AACAGGCGAGTGCCAAGATCAAGGTCTCTGATTGTC...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCGTGGAGGGCTCCCCTaGTCTGACACTCATAACTTG +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFRGGLP*SDTHNL
Trigger: CAAGTTATGAGTGTCAGAGCAGGGGAGCCCTCCACG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAAACAGGAGTGACCACTaGACCTGGCTCAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILNRSDH*TWLSLI
Trigger: AATGAGACTGAGCCAGGTGCAGTGGTCACTCCTGTT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACACAGGGCACAGGCTaGCTTCCCGGCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTQGTG*LPGTQV
Trigger: GACCTGCGTGCCGGGAAGCCAGCCTGTGCCCTGTGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTACAGCAAGCTGGCCATTaGTCCCTTCTATTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILQQAGH*SLLFLK
Trigger: CTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTG...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAGGTCCCTTCTATTCCTaGAGTCACTGTTGTGACTTC +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILGPFYS*SHCCDF
Trigger: GAAGTCACAACAGTGACTTCAGGAATAGAAGGGACC...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCACTTGCAGACCCTCCTaGAAGCTCACCCTGTACTAC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFTCRPS*KLTLYY
Trigger: GTAGTACAGGGTGAGCTTGCAGGAGGGTCTGCAAGT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGCGATCATAGCTCACTaGAGACTCAAACTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFAIIAH*RLKLLG
Trigger: GCCGAGGAGTTTGAGTCTGCAGTGAGCTATGATCGC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTATTTTCCCTCTACCTATaGCCTGCACATTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILFSLYL*PAHSIW
Trigger: CCAGATGGAATGTGCAGGGCATAGGTAGAGGGAAAA...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCGTGGGACTATCTTCTTaGAGCCAGGTGACGTTTCAT +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLVGLSS*SQVTFH
Trigger: ATGAAACGTCACCTGGCTGCAAGAAGATAGTCCCAC...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTCTCTGGCAGTTCTCTaGCCCAGTTCATCCAAGACC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFSLAVL*PSSSKT
Trigger: GGTCTTGGATGAACTGGGGCAGAGAACTGCCAGAGA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCTCCAGGCATCCGCGTaGGGAAACTGCAGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLLQASA*GNCSKR
Trigger: TCTTTTACTGCAGTTTCCCCACGCGGATGCCTGGAG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGGGTCTGGAATGCAGTaGTGCGATCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFGSGMQ*CDHSSL
Trigger: CAGTGAGCTATGATCGCACCACTGCATTCCAGACCC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCCTCCAAGTTCCACTTaGCCTGCAGGGTTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLPPSST*PAGFSC
Trigger: ACAGCTAAACCCTGCAGGCCAAGTGGAACTTGGAGG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCTGTGAAGTGGGCATGTaGATGTCATTATCCCAATGT +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFCEVGM*MSLSQC
Trigger: ACATTGGGATAATGACATCCACATGCCCACTTCACA...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp TCCCTATTCTCACACACTAGAAGACGGGTTAGCAGTTaGGCACTCCATGTTGAAAAGTTGCCAACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLFSHTRRRVSS*ALHVEKLPTPA
Trigger: GGCAGGGGTTGGCAACTTTTCAACATGGAGTGCCAAACTGCTAACCCGTCTTCTAGTGTGTGAGAATAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp GTTTGGTTTTCCAGTAGCCTATTCTCTTCGCAGCCTTaGAACCTAACACCTCTTTGGCCCCAGCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VWFSSSLFSSQP*NLTPLWPQLLS
Trigger: AGACAGCAGCTGGGGCCAAAGAGGTGTTAGGTTCAAAGGCTGCGAAGAGAATAGGCTACTGGAAAACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp CGACGTCCTGATTCCTCGTCTTTGACCCAGTGTCCCTaGGTTGCTAAGTCAACCAGTTCTAACTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RRPDSSSLTQCP*VAKSTSSNFLW
Trigger: CCAGAGAAAGTTAGAACTGGTTGACTTAGCAACCAAGGGACACTGGGTCAAAGACGAGGAATCAGGACGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGGATCACCACCTTGTTaGCTTCTCGAAGGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLGSPPC*LLEGSE
Trigger: TTCTGACCCTTCGAGAAGTCAACAAGGTGGTGATCC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCTATCAGGAATGGTTTTaGAGAATGCAAAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFYQEWF*RMQSRT
Trigger: TGTCCTGCTTTGCATTCTTCAAAACCATTCCTGATA...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTACACTTGATCTTAGCTaGGAAGTGATGGATAACCTG +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTTLDLS*EVMDNL
Trigger: CAGGTTATCCATCACTTCTCAGCTAAGATCAAGTGT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCTCTCTTCCCATTTCTTaGCACCAAGAATACGAAAGA +
Preference number: 4 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFSLPIS*HQEYER
Trigger: TCTTTCGTATTCTTGGTGTCAAGAAATGGGAAGAGA...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTCACAGTGCTGGCTCTaGAGACAGAGCTGCAATGAA +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFSQCWL*RQSCNE
Trigger: TTCATTGCAGCTCTGTCTGCAGAGCCAGCACTGTGA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGACTTTTTCTTCTTGTTaGGTCTGCCACCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLTFSSC*VCHPCG
Trigger: CCCACAGGGGTGGCAGACCCAACAAGAAGAAAAAGT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTAAGGCTGAGAAGCGATaGAGAATGTGGATTTTTGGA +
Preference number: 4 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTKAEKR*RMWIFG
Trigger: TCCAAAAATCCACATTCTCCATCGCTTCTCAGCCTT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTACCTTCTAGGTTTTCTTaGCACCTCCAAGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILPSRFS*HLQVPL
Trigger: AAGTGGAACTTGGAGGTGCCAAGAAAACCTAGAAGG...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCACAAGCCGAGGTTTTaGAGGTGGGAAAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFHKPRF*RWESFG
Trigger: TCCAAAGCTTTCCCACCTCCAAAACCTCGGCTTGTG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAGTGGATTTTTGGACGTaGATTCTGTTGGGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILVDFWT*ILLGLV
Trigger: AACCAAACCCAACAGAATTCACGTCCAAAAATCCAC...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCCTGAAGTCACTGTTGTaGCTTCAGATAAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLLKSLL*LQIRLL
Trigger: AAGAAGCCTTATCTGAAGTCACAACAGTGACTTCAG...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCTCTTTGGCCCCAGCTaGTGTCTGCACTTGCAGACC +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSLFGPS*CLHLQT
Trigger: GGTCTGCAAGTGCAGACAGCAGCTGGGGCCAAAGAG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCATAGCCCTAGTTCTCTaGTTACCTTTCAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLIALVL*LPFKER
Trigger: TCTCTCCTTGAAAGGTAAGCAGAGAACTAGGGCTAT...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGTCAGTGCTACTTGTTaGGTCAGACCTGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFVSATC*VRPVRT
Trigger: AGTTCTCACAGGTCTGACCCAACAAGTAGCACTGAC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGGAGCATCCTGCCTGTaGCTGGCAGAAGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSGASCL*LAEEAI
Trigger: AATGGCCTCTTCTGCCAGCCACAGGCAGGATGCTCC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCCTGCACATTCCATCTaGACTTGTCCAAAATCCCTC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFPAHSI*TCPKSL
Trigger: GAGGGATTTTGGACAAGTCCAGATGGAATGTGCAGG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTATTTATTGATCATTCTTaGGTGTTTCTCGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILFIDHS*VFLAEG
Trigger: CCCCTCTGCGAGAAACACCCAAGAATGATCAATAAA...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGTTTTGCCCCCTGGGTaGGCCACGTGGCTAGAATCA +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSVLPPG*ATWLES
Trigger: TGATTCTAGCCACGTGGCCCACCCAGGGGGCAAAAC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGACTGGGTTTAGCCCATaGCAATGTAGAGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLTGFSP*QCREMG
Trigger: GCCCATTTCTCTACATTGCCATGGGCTAAACCCAGT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACCGGGTGGCCAGGCTaGCTTCCATATTGTACACCT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTGWPG*LPYCTP
Trigger: AGGTGTACAATATGGAAGGCAGCCTGGCCACCCGGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTTCAAGCGAGTCTCCTaGCTCAGACTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSFKRVS*LRLPSS
Trigger: GCTACTGGGGAGTCTGAGGCAGGAGACTCGCTTGAA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGAAGGAGAAGCTGATTTaGAGAAAGCTCTACTCGGGT +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLKEKLI*RKLYSG
Trigger: ACCCGAGTAGAGCTTTCTGCAAATCAGCTTCTCCTT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCATAGACCCTGGGAAATaGAAAGACACCGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFIDPGK*KDTEAE
Trigger: TTCTGCTTCGGTGTCTTTCCATTTCCCAGGGTCTAT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGGATTTTCTTTTCACTaGTCCATCCACGCACAACCT +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLGFSFH*SIHAQP
Trigger: AGGTTGTGCGTGGATGGACCAGTGAAAAGAAAATCC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCAGCAGCTCTGTGAAGTaGGCATGTGGATGTCATTAT +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFSSSVK*ACGCHY
Trigger: ATAATGACATCCACATGCCCACTTCACAGAGCTGCT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp TTAGCTGTCACCCTGCAGCCGAACAGTTTCCAGTTCTaGCCTGTAATATACAGAGCAGCCTCAAATGTCTGT +
Preference number: 4 (lower is better)
Translates to: LAVTLQPNSFQF*PVIYRAASNVC
Trigger: ACAGACATTTGAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTGACAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCACTGCCACCACTTATaGAAAGGTCCGGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSHCHHL*KGPVVT
Trigger: TGTGACCACCGGACCTTTTCATAAGTGGTGGCAGTG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGCAATCTCATTCGTTCTaGCACCTTCATTCTCAAACC +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLQSHSF*HLHSQT
Trigger: GGTTTGAGAATGAAGGTGTCAGAACGAATGAGATTG...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCAGGTTTCTATTGTTTTaGCCCCTGGGTGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSRFLLF*PLGGPR
Trigger: ACGTGGCCCACCCAGGGGGCAAAACAATAGAAACCT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCCAAATTATGCTCAATaGAACACTTCCCATCCATGC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFPNYAQ*NTSHPC
Trigger: GCATGGATGGGAAGTGTTGCATTGAGCATAATTTGG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCCATTTAACCCTGAGTaGACACAGCACATATTTCAG +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFPFNPE*TQHIFQ
Trigger: CTGAAATATGTGCTGTGTCCACTCAGGGTTAAATGG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGTATCTGCGATATAACTaGGAACTCTGCCTTAGTCCT +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLYLRYN*ELCLSP
Trigger: AGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATA...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCAAACTCTCAAAAGATTaGGCCACTCTTGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLKLSKD*ATLAIF
Trigger: AAAAATGGCAAGAGTGGCCCAATCTTTTGAGAGTTT...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp CTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTaGGAGATTTTACCTCCAAATTATGCTCAATGCAAC +
Preference number: 4 (lower is better)
Translates to: LSIRSPGHSVTV*EILPPNYAQCN
Trigger: GTTGCATTGAGCATAATTTGGAGGTAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTTTGGCACTCCATGTTaGAAAGTTGCCAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSFGTPC*KVANPC
Trigger: GCAGGGGTTGGCAACTTTTCAACATGGAGTGCCAAA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCGCTTATGTGGTTCTTTaGCCAAATACTGTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: LCICDITGNSALVLSRAFAYVVL*PNTVLV
Trigger: GACTAGAACAGTATTTGGTCAAAGAACCACATAAGC...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp CTAAGTGCTGTGATTACAAGCGTGTTCCTGGTCTCTTaGTATCTGCGATATAACTGGGAACTCTGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: LSAVITSVFLVS*YLRYNWELCLS
Trigger: ACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAGAGACCAGGAACACGCTTGTAATCACAGCACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp ATGCTGATGGAGGGGTATCAGGTGGGTACAAGTCAGTaGAAACTTTTCCTAACCAACACCTTGTATTTGAGC +
Preference number: 4 (lower is better)
Translates to: MLMEGYQVGTSQ*KLFLTNTLYLS
Trigger: GCTCAAATACAAGGTGTTGGTTAGGAAAAGTTTCAACTGACTTGTACCCACCTGATACCCCTCCATCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGTCGTCAAATCAATTCTaGATGGTTTTCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLSSNQF*MVFPSS
Trigger: AGAAGATGGGAAAACCATGCAGAATTGATTTGACGA...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGCAACTTCCACCTCCTaGGTTCAAATGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSATSTS*VQMILL
Trigger: CAGGAGAATCATTTGAACCCAGGAGGTGGAAGTTGC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGACACGGCAACAATCTaGTTTCTCTATCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSDTATI*FLYLFP
Trigger: GGGGAAAAGATAGAGAAATCAGATTGTTGCCGTGTC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTTCACAGACATTCACTaGGCACCTACTATGAGGTAT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSFTDIH*APTMRY
Trigger: ATACCTCATAGTAGGTGCTCAGTGAATGTCTGTGAA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGATCCCTATTCTAGTTaGTCCTGTAGAAACTCCACT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSDPYSS*SCRNST
Trigger: AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTTACAAGCGTGTTCCTaGTCTCTTTGTATCTGCGAT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSLQACS*SLCICD
Trigger: ATCGCAGATACAAAGAGACCAGGAACACGCTTGTAA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR GCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTGGTCTCTTTGTATCTaGGATATAACTGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSWSLCI*DITGNS
Trigger: AGAGTTCCCAGTTATATCGCAGATACAAAGAGACCA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR TCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTACAAAATTCCCATCTaGGAAAGGTTCCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSYKIPI*ERFPFF
Trigger: GAAAAATGGGAACCTTTCTCAGATGGGAATTTTGTA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CCA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACTCAGTTACGGTGTTaGAGATTTTACCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTQLRC*RFYLQI
Trigger: AATTTGGAGGTAAAATCTCCAACACCGTAACTGAGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
3UTR CAA 72 bp AGTCAGTTGAAACTTTTCCTAACCAACACCTTGTATTaGAGCTTTATGGTGTCCGAAATACTTCTCTACATT +
Preference number: 4 (lower is better)
Translates to: SQLKLFLTNTLY*SFMVSEILLYI
Trigger: AATGTAGAGAAGTATTTCGGACACCATAAAGCTCAAATACAAGGTGTTGGTTAGGAAAAGTTTCAACTGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 90 bp CACGTGGCCCGCCACGCTGACAGCCACGCGGTCCCCGCTAGGCAGTaGCGCCACCGCGTGGCTGGCCTGGGAGAGGCTCAGGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: HVARHADSHAVPARQ*RHRVAGLGEAQGPA
Trigger: CGCAGGGCCCTGAGCCTCTCCCAGGCCAGCCACGCGGTGGCGGCACTGCCTAGCGGGGACCGCGTGGCTGTCAGCGTGGCGGGCCACGTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS TCA 90 bp CGATCGCCCCTTCCAGGGAGAGGATCTCGGCCTCTCGCCCCAGGCTaGGTACCCGGCGGGCGAAGGCGGCTGCGGCCCTGGCCACCTGCT +
Preference number: 5 (lower is better)
Translates to: RSPLPGRGSRPLAPG*VPGGRRRLRPWPPA
Trigger: AGCAGGTGGCCAGGGCCGCAGCCGCCTTCGCCCGCCGGGTACTCAGCCTGGGGCGAGAGGCCGAGATCCTCTCCCTGGAAGGGGCGATCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 90 bp AGGCTGAGTACCCGGCGGGCGAAGGCGGCTGCGGCCCTGGCCACCTaGTCCCGGCCCTCAAGCTCCGCCAGCCTCTCCCGAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RLSTRRAKAAAALAT*SRPSSSASLSRAAS
Trigger: AGAAGCTGCTCGGGAGAGGCTGGCGGAGCTTGAGGGCCGGGAGCAGGTGGCCAGGGCCGCAGCCGCCTTCGCCCGCCGGGTACTCAGCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CCA 90 bp TGGGTGTGGGTCTGGCGGGTGCAGCGGTGCCCGTCGGCACAGGCCTaGCACAAGTCATCGGCACAGTCCAGGCACCGGGCCGTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: WVWVWRVQRCPSAQA*HKSSAQSRHRAVAG
Trigger: GCCGGCCACGGCCCGGTGCCTGGACTGTGCCGATGACTTGTGCCAGGCCTGTGCCGACGGGCACCGCTGCACCCGCCAGACCCACACCCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306085.11
ENST00000412507.1
CDS GCA 90 bp ACCAGGTCCACCACGCGGTGGGTGTGGGTCTGGCGGGTGCAGCGGTaGCCGTCGGCACAGGCCTGGCACAAGTCATCGGCACAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TRSTTRWVWVWRVQR*PSAQAWHKSSAQSR
Trigger: CCTGGACTGTGCCGATGACTTGTGCCAGGCCTGTGCCGACGGGCACCGCTGCACCCGCCAGACCCACACCCACCGCGTGGTGGACCTGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306085.11
ENST00000412507.1
CDS GCA 90 bp TGTAGCCCACCAGGTCCACCACGCGGTGGGTGTGGGTCTGGCGGGTaGAGCGGTGCCCGTCGGCACAGGCCTGGCACAAGTCATCGGCAC +
Preference number: 5 (lower is better)
Translates to: CSPPGPPRGGCGSGG*SGARRHRPGTSHRH
Trigger: GTGCCGATGACTTGTGCCAGGCCTGTGCCGACGGGCACCGCTGCACCCGCCAGACCCACACCCACCGCGTGGTGGACCTGGTGGGCTACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306085.11
ENST00000412507.1
CDS CCA 90 bp TGTGAGCAGGGCTGGCACAGGAAGCGCAGTGCCTCCCCGGGGTGCTaGGGACACTGGGCCGCTTGGCGCTCCCGGGCCTCCTCATCATAC +
Preference number: 5 (lower is better)
Translates to: CEQGWHRKRSASPGC*GHWAAWRSRASSSY
Trigger: GTATGATGAGGAGGCCCGGGAGCGCCAAGCGGCCCAGTGTCCCCAGCACCCCGGGGAGGCACTGCGCTTCCTGTGCCAGCCCTGCTCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306085.11
ENST00000412507.1
CDS GCA 90 bp CTCGCGGCACTCGGGGCAGCGGACGCGGCCGCCATCCGCCAGCTGTaGCAGGCAGTCTTGGCAGTAGGTATGCAGGCAGGGCAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: LAALGAADAAAIRQL*QAVLAVGMQAGQCL
Trigger: AAGACACTGCCCTGCCTGCATACCTACTGCCAAGACTGCCTGGCACAGCTGGCGGATGGCGGCCGCGTCCGCTGCCCCGAGTGCCGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306085.11
ENST00000412507.1
ENST00000467847.1
CDS GCA 90 bp CCTGCGCCACTGCACTTCGCCGTTGGGGTTGATGAGATAGAGCCGTaGGCTAGCGGAGAAGGCCACCGCGCTCTGCAGGGCGGCCACGCT +
Preference number: 5 (lower is better)
Translates to: PAPLHFAVGVDEIEP*ASGEGHRALQGGHA
Trigger: AGCGTGGCCGCCCTGCAGAGCGCGGTGGCCTTCTCCGCTAGCGCACGGCTCTATCTCATCAACCCCAACGGCGAAGTGCAGTGGCGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 90 bp GAGGCAGGCAGGGGTGGTCCAGGTGGGGGTCTAGGCGGCACTCTCTaGACAGCAACTGTGAGCAGGGCTGGCACAGGAAGCGCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: EAGRGGPGGGLGGTL*TATVSRAGTGSAVP
Trigger: AGGCACTGCGCTTCCTGTGCCAGCCCTGCTCACAGTTGCTGTGCAGAGAGTGCCGCCTAGACCCCCACCTGGACCACCCCTGCCTGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306085.11
ENST00000412507.1
CDS CCA 90 bp ATGAACCGGGTGGCCAGGCTGCCTTCCATATTGTACACCTCCACGTaGCCCGCCACGCTGACAGCCACGCGGTCCCCGCTAGGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: MNRVARLPSILYTST*PATLTATRSPLGSA
Trigger: GGCACTGCCTAGCGGGGACCGCGTGGCTGTCAGCGTGGCGGGCCACGTGGAGGTGTACAATATGGAAGGCAGCCTGGCCACCCGGTTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS TCA 90 bp GGGAGCAGCCCTCAGGGACCGGCACGGTGCCCTTGTAGTCGCCGTTaGGGGAGAAGCGTTTCAGTGCCCGGTTCTGCTCATCCGCCACCA +
Preference number: 5 (lower is better)
Translates to: GSSPQGPARCPCSRR*GRSVSVPGSAHPPP
Trigger: TGGTGGCGGATGAGCAGAACCGGGCACTGAAACGCTTCTCCCTCAACGGCGACTACAAGGGCACCGTGCCGGTCCCTGAGGGCTGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 90 bp GTGCCCGCAGCTGCTCCAGGCAGATTTTACAGGCCAGGAAGTCGCTaGTCAGGGCCTCCAGGAGGGAGGGCGAGGACCCGTGGGAAACCA +
Preference number: 5 (lower is better)
Translates to: VPAAAPGRFYRPGSR*SGPPGGRARTRGKP
Trigger: TGGTTTCCCACGGGTCCTCGCCCTCCCTCCTGGAGGCCCTGAGCAGCGACTTCCTGGCCTGTAAAATCTGCCTGGAGCAGCTGCGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306085.11
ENST00000412507.1
ENST00000467847.1
CDS TCA 90 bp GAAACACCAGCGCCCGCAGGCCCCGGCTGGCCTTGCCTCCAGGAATaGACCGGGTGGCCAGGCTGCCTTCCATATTGTACACCTCCACGT +
Preference number: 5 (lower is better)
Translates to: ETPAPAGPGWPCLQE*TGWPGCLPYCTPPR
Trigger: ACGTGGAGGTGTACAATATGGAAGGCAGCCTGGCCACCCGGTTCATTCCTGGAGGCAAGGCCAGCCGGGGCCTGCGGGCGCTGGTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 90 bp CGGCACGGTGCCCTTGTAGTCGCCGTTGAGGGAGAAGCGTTTCAGTaGCCGGTTCTGCTCATCCGCCACCAGGATCTCCCGGGGACCGAA +
Preference number: 5 (lower is better)
Translates to: RHGALVVAVEGEAFQ*PVLLIRHQDLPGTE
Trigger: TTCGGTCCCCGGGAGATCCTGGTGGCGGATGAGCAGAACCGGGCACTGAAACGCTTCTCCCTCAACGGCGACTACAAGGGCACCGTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGGGACACTGGGCCGCTaGGCGCTCCCGGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTGTLGR*ALPGLL
Trigger: GAGGAGGCCCGGGAGCGCCAAGCGGCCCAGTGTCCC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 90 bp TCACAGATTACCACACTATTCTGCTGCCAGTCCGACCCCACGAAATaGCCCTGGGGGCTGGTGGTCAGAAACACCAGCGCCCGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SQITTLFCCQSDPTK*PWGLVVRNTSARRP
Trigger: GGGCCTGCGGGCGCTGGTGTTTCTGACCACCAGCCCCCAGGGGCATTTCGTGGGGTCGGACTGGCAGCAGAATAGTGTGGTAATCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 90 bp CCAGTCCACAGGCCTTGTGGCAAACATGGTGGAAGCCCTCCTGTGTaGACAGGTACTGGGGTCCTGCTGTATAGGGTGCCAGGGTGCGAG +
Preference number: 5 (lower is better)
Translates to: PVHRPCGKHGGSPPV*TGTGVLLYRVPGCE
Trigger: CTCGCACCCTGGCACCCTATACAGCAGGACCCCAGTACCTGTGCACACAGGAGGGCTTCCACCATGTTTGCCACAAGGCCTGTGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467847.1
CDS GCA 90 bp CAGGCAGTCTTGGCAGTAGGTATGCAGGCAGGGCAGTGTCTTGGGTaGCCGCAGCTGCTCCAGGCAGATTTTACAGGCCAGGAAGTCGCT +
Preference number: 5 (lower is better)
Translates to: QAVLAVGMQAGQCLG*PQLLQADFTGQEVA
Trigger: AGCGACTTCCTGGCCTGTAAAATCTGCCTGGAGCAGCTGCGGGCACCCAAGACACTGCCCTGCCTGCATACCTACTGCCAAGACTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306085.11
ENST00000412507.1
ENST00000467847.1
CDS GCA 90 bp CCCTGGGTACCAGCTCCGTCTTTCCCACCATCCTTCTGGGGCTGCTaGTCCTCAAAGGACAGCCGAAGAAGGTGGCAGTTCTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PWVPAPSFPPSFWGC*SSKDSRRRWQFLSR
Trigger: CCTGGACAAGAACTGCCACCTTCTTCGGCTGTCCTTTGAGGAGCAGCAGCCCCAGAAGGATGGTGGGAAAGACGGAGCTGGTACCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 90 bp CCTCCCTGGGTACCAGCTCCGTCTTTCCCACCATCCTTCTGGGGCTaGTGCTCCTCAAAGGACAGCCGAAGAAGGTGGCAGTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PPWVPAPSFPPSFWG*CSSKDSRRRWQFLS
Trigger: GGACAAGAACTGCCACCTTCTTCGGCTGTCCTTTGAGGAGCAGCAGCCCCAGAAGGATGGTGGGAAAGACGGAGCTGGTACCCAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS TCA 90 bp GCCGTCCAGATTCGGCCCCAGGGCTGGGCTGGGCTCCCGGGAAATTaGCTTGAGCCTGCCTTTGAACTTTTTCTTCTTGTTGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: AVQIRPQGWAGLPGN*LEPAFELFLLVGSA
Trigger: GGCAGACCCAACAAGAAGAAAAAGTTCAAAGGCAGGCTCAAGTCAATTTCCCGGGAGCCCAGCCCAGCCCTGGGGCCGAATCTGGACGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCAGGCCCCGGCTGGCCTaGCCTCCAGGAATGAACCGG +
Preference number: 5 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLRPRLA*PPGMNR
Trigger: CCGGTTCATTCCTGGAGGCAAGGCCAGCCGGGGCCT...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAACTCCATGTTGAAAAGTaGCCAACCCCTGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQELHVEK*PTPALQ
Trigger: CTGAAGGGCAGGGGTTGGCAACTTTTCAACATGGAG...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATCCGTCGCAGCCCCATaGCACCTTCTAGGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQESVAAP*HLLGFL
Trigger: AAGAAAACCTAGAAGGTGCAATGGGGCTGCGACGGA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAAACTTTTTCTTCTTGTaGGGTCTGCCACCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQENFFFL*GLPPLW
Trigger: CCACAGGGGTGGCAGACCCAACAAGAAGAAAAAGTT...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAAGACGGGTTAGCAGTTaGGCACTCCATGTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQERRVSS*ALHVEK
Trigger: CTTTTCAACATGGAGTGCCAAACTGCTAACCCGTCT...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCTTCCCGAGAAGCCACTaGGCATCCCCATCTCTAGGG +
Preference number: 5 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFFPRSH*ASPSLG
Trigger: CCCTAGAGATGGGGATGCCAAGTGGCTTCTCGGGAA...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTAGAAGGTGGCAGTTCTaGTCCAGGAGCCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTRRWQF*SRSPGW
Trigger: CCATCCTGGGCTCCTGGACAAGAACTGCCACCTTCT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTGAACCTAACACCTCTTaGGCCCCAGCTGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTEPNTS*APAAVC
Trigger: GCAGACAGCAGCTGGGGCCAAAGAGGTGTTAGGTTC...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTACGAAGAAGTTGGTCTaGAAGGAGGCCACACCCTCG +
Preference number: 5 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTTKKLV*KEATPS
Trigger: CGAGGGTGTGGCCTCCTTCAAGACCAACTTCTTCGT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAAGCTCCACCAGGTTATaGTCCACACCGGCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILSSTRL*STPASS
Trigger: ACTGCTGGCCGGTGTGGACAATAACCTGGTGGAGCT...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAGGTCACGCCACCACCTaGGTCCCTATTCTCACACAC +
Preference number: 5 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILGHATT*VPILTH
Trigger: GTGTGTGAGAATAGGGACCAAGGTGGTGGCGTGACC...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS TCA 90 bp AGTCTCCAAGGAGGGACCCCTTCGGGTCCAGGATCACCACCTTGTTaGCTTCTCGAAGGGTCAGAAAGATGTAGCCCTTCTTATCCACAG +
Preference number: 5 (lower is better)
Translates to: SLQGGTPSGPGSPPC*LLEGSERCSPSYPQ
Trigger: CTGTGGATAAGAAGGGCTACATCTTTCTGACCCTTCGAGAAGTCAACAAGGTGGTGATCCTGGACCCGAAGGGGTCCCTCCTTGGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CCA 90 bp TTAGCTAATAATCGAATCCTCAGTGTCCCCAGTCCACAGGCCTTGTaGCAAACATGGTGGAAGCCCTCCTGTGTGCACAGGTACTGGGGT +
Preference number: 5 (lower is better)
Translates to: LANNRILSVPSPQAL*QTWWKPSCVHRYWG
Trigger: ACCCCAGTACCTGTGCACACAGGAGGGCTTCCACCATGTTTGCCACAAGGCCTGTGGACTGGGGACACTGAGGATTCGATTATTAGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467847.1
CDS-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTTCCAGGATCACCACCTaGTTGACTTCTCGAAGGGTC +
Preference number: 5 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTSRITT*LTSRRV
Trigger: GACCCTTCGAGAAGTCAACAAGGTGGTGATCCTGGA...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCTTGCCCAGCCTAGTCTaGAACTCCTGGCCTCAAGAC +
Preference number: 5 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLLPSLV*NSWPQD
Trigger: GTCTTGAGGCCAGGAGTTCAAGACTAGGCTGGGCAA...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAATTCTCTTCCCATTTCTaGACACCAAGAATACGAAAG +
Preference number: 5 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEFSSHF*TPRIRK
Trigger: CTTTCGTATTCTTGGTGTCAAGAAATGGGAAGAGAA...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAGCATTCACAATCCAGTaGGGTAGTCTAATTTTGCTA +
Preference number: 5 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEAFTIQ*GSLILL
Trigger: TAGCAAAATTAGACTACCCAACTGGATTGTGAATGC...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCCTCCCTCTTCTCGGGTaGTCTGGGCTTTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLLPLLG*SGLFPL
Trigger: AAGAGGAAAAAGCCCAGACAACCCGAGAAGAGGGAG...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TGGGCAGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCGGCCAGGAAGTTGGTCTGAGTTATTaGGTGAACTCAACAAAACTT +
Preference number: 5 (lower is better)
Translates to: WAAGQRHSSLPRWDGGQEVGLSY*VNSTKL
Trigger: AAGTTTTGTTGAGTTCACCAAATAACTCAGACCAAC...TTCCTGGCCGCCATCCCATCTAGGAAGTGAGGAGTGTCTCTGCCCGGCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCGGAGGTGGGAAAGCTTaGGAGAGTCATACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLGGGKA*ESHTSL
Trigger: GAGACTGGTATGACTCTCCAAAGCTTTCCCACCTCC...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTTGTGGGACTATCTTCTaGCAGCCAGGTGACGTTTCA +
Preference number: 5 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTCGTIF*QPGDVS
Trigger: TGAAACGTCACCTGGCTGCAAGAAGATAGTCCCACA...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTAGACAATCAGAGACCTaGATCTTGGCACTCGCCTGT +
Preference number: 5 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTRQSET*ILALAC
Trigger: ACAGGCGAGTGCCAAGATCAAGGTCTCTGATTGTCT...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTACCATTGACGAAGAAGTaGGTCTTGAAGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILPLTKK*VLKEAT
Trigger: TGTGGCCTCCTTCAAGACCAACTTCTTCGTCAATGG...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCGTTTGGCACTCCATGTaGAAAAGTTGCCAACCCCTG +
Preference number: 5 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLVWHSM*KSCQPL
Trigger: CAGGGGTTGGCAACTTTTCAACATGGAGTGCCAAAC...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGGGGGACCCCGACCTTaGCAAACCTTCCCAGAGCGG +
Preference number: 5 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSGGPRP*QTFPER
Trigger: CCGCTCTGGGAAGGTTTGCAAAGGTCGGGGTCCCCC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCAAGGTTTCTATTGTTTaGCCCCCTGGGTGGGCCACG +
Preference number: 5 (lower is better)
Translates to: LCICDITGNSALVLSRAFKVSIV*PPGWAT
Trigger: CGTGGCCCACCCAGGGGGCAAAACAATAGAAACCTT...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CTGCCTCCTCTGCTTCTGAGAGTTAAGGTCACGCCACCACCTTGGTCCCTATTCGTGTTCCTGGTCTCTTaGTATCTGCGATATAACTGG +
Preference number: 5 (lower is better)
Translates to: LPPLLLRVKVTPPPWSLFVFLVS*YLRYNW
Trigger: CCAGTTATATCGCAGATACAAAGAGACCAGGAACAC...GAATAGGGACCAAGGTGGTGGCGTGACCTTAACTCTCAGAAGCAGAGGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTAGAAGGAGAAGCTGATTaGCAGAAAGCTCTACTCGGG +
Preference number: 5 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILEGEAD*QKALLG
Trigger: CCCGAGTAGAGCTTTCTGCAAATCAGCTTCTCCTTC...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp GCAGGGCTTTCTATCAGGTCCCCAGGCCACTCAGTTACGGTGTTGGAGATTTTATCAGCAAGCTGGCCATaGGTCCCTTCTATTCCTGAA +
Preference number: 5 (lower is better)
Translates to: AGLSIRSPGHSVTVLEILSASWP*VPSIPE
Trigger: TTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGA...TAAAATCTCCAACACCGTAACTGAGTGGCCTGGGGACCTGATAGAAAGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CCA 90 bp TCCGTGTGTACATCCAGCAAACGTAAAAATGTCAGTGCTACTTGTTaGGTCAGACCTGTGAGAACTGACAAGACCAGGAGTCCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: SVCTSSKRKNVSATC*VRPVRTDKTRSPWP
Trigger: AGGCCAGGGACTCCTGGTCTTGTCAGTTCTCACAGGTCTGACCCAACAAGTAGCACTGACATTTTTACGTTTGCTGGATGTACACACGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467847.1
CDS-3UTR CAA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCAAATGTCAGTGCTACTaGTTGGGTCAGACCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLKCQCY*LGQTCE
Trigger: CTCACAGGTCTGACCCAACAAGTAGCACTGACATTT...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGAGGTCCAGCAGCCCATaGACGAAGAAGTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLRSSSP*TKKLVL
Trigger: CAAGACCAACTTCTTCGTCAATGGGCTGCTGGACCT...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCTTGAACTTTTTCTTCTaGTTGGGTCTGCCACCCCTG +
Preference number: 5 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLLNFFF*LGLPPL
Trigger: CAGGGGTGGCAGACCCAACAAGAAGAAAAAGTTCAA...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTTAGGAAACCAGGTTTaGCTCTGTCACTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LCICDITGNSALVLSRAFLGNQV*LCHSGW
Trigger: CCAGCCTGAGTGACAGAGCAAAACCTGGTTTCCTAA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCCCCAGTGTCCCTTGGTaGCTAAGTCAACCAGTTCTA +
Preference number: 5 (lower is better)
Translates to: LCICDITGNSALVLSRAFPSVPW*LSQPVL
Trigger: TAGAACTGGTTGACTTAGCAACCAAGGGACACTGGG...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CTTTGTATCTGCGATATAACTGGGAACTCTGCCTTAGTCCTGAGCAGGGCTTTCTTGACCCAGTGTCCCTaGGTTGCTAAGTCAACCAGT +
Preference number: 5 (lower is better)
Translates to: LCICDITGNSALVLSRAFLTQCP*VAKSTS
Trigger: ACTGGTTGACTTAGCAACCAAGGGACACTGGGTCAA...GAAAGCCCTGCTCAGGACTAAGGCAGAGTTCCCAGTTATATCGCAGATACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGTCCCGGGAAATTGACTaGAGCCTGCCTTTGAACTTT +
Preference number: 5 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLSREID*SLPLNF
Trigger: AAAGTTCAAAGGCAGGCTCAAGTCAATTTCCCGGGA...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCAGGCTGCCTTCCATATaGTACACCTCCACGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSRLPSI*YTSTWP
Trigger: GGGCCACGTGGAGGTGTACAATATGGAAGGCAGCCT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCGGGCTTTTTCCTCTTTaGGGGTCTGGGCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSGLFPL*GSGLHL
Trigger: GAGATGGAGCCCAGACCCCAAAAGAGGAAAAAGCCC...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCAACAGTTTCCAGTTCTaGCCTGTAATATACAGAGCA +
Preference number: 5 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLNSFQF*PVIYRA
Trigger: TGCTCTGTATATTACAGGCAAGAACTGGAAACTGTT...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCCACAAGCCGAGGTTTaGGAGGTGGGAAAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSPQAEV*EVGKLW
Trigger: CCAAAGCTTTCCCACCTCCAAAACCTCGGCTTGTGG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CCCCGCCCCCATGTAGCTGATCCCTATTCTAGTTGGTCCTGTAGAAACTCCACTTTGGGTAGTCTAATTTaGCTACCTTTGGTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: PRPHVADPYSSWSCRNSTLGSLI*LPLVKL
Trigger: TAACTTGACCAAAGGTAGCAAAATTAGACTACCCAA...AGTGGAGTTTCTACAGGACCAACTAGAATAGGGATCAGCTACATGGGGGCGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGACTTGAGCCTGCCTTaGAACTTTTTCTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLDLSLP*NFFFLL
Trigger: CAACAAGAAGAAAAAGTTCAAAGGCAGGCTCAAGTC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp CACCCTGCAGCCGAACAGTTTCCAGTTCTTGCCTGTAATATACAGAGCAGCCTCAGCTTATGTGGTTCTTaGACCAAATACTGTTCTAGT +
Preference number: 5 (lower is better)
Translates to: HPAAEQFPVLACNIQSSLSLCGS*TKYCSS
Trigger: ACTAGAACAGTATTTGGTCAAAGAACCACATAAGCT...GAGGCTGCTCTGTATATTACAGGCAAGAACTGGAAACTGTTCGGCTGCAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp GGCATTACATTTCAGCAAGCTGGCCATTGGTCCCTTCTATTCCTGAAGTCACTGGTGGGTACAAGTCAGTaGAAACTTTTCCTAACCAAC +
Preference number: 5 (lower is better)
Translates to: GITFQQAGHWSLLFLKSLVGTSQ*KLFLTN
Trigger: GTTGGTTAGGAAAAGTTTCAACTGACTTGTACCCAC...CAGTGACTTCAGGAATAGAAGGGACCAATGGCCAGCTTGCTGAAATGTAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCTCAGAGACCTTGATCTaGGCACTCGCCTGTTCAACC +
Preference number: 5 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSSETLI*ALACST
Trigger: GGTTGAACAGGCGAGTGCCAAGATCAAGGTCTCTGA...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCCTGATTCCTCGTCTTaGACCCAGTGTCCCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSPDSSS*TQCPLV
Trigger: AACCAAGGGACACTGGGTCAAAGACGAGGAATCAGG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACCGAAGCAGAAGCGTaGGAGCCTAGAGATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTEAEA*EPRDFS
Trigger: AGAAAAATCTCTAGGCTCCAACGCTTCTGCTTCGGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCACATTCCATCTGGACTaGTCCAAAATCCCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSTFHLD*SKIPLV
Trigger: AACCAGAGGGATTTTGGACAAGTCCAGATGGAATGT...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCACTCAGTTACGGTGTaGGAGATTTTACCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSHSVTV*EILPPN
Trigger: ATTTGGAGGTAAAATCTCCAACACCGTAACTGAGTG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS-3UTR CAA 90 bp TTACCTCCAAATTATGCTCAATGCAACACTTCCCATCCATGCTTCTCATTTTCCCCTGATTCTCCGTTTTaGAGGATTATGACTGTATCA +
Preference number: 5 (lower is better)
Translates to: LPPNYAQCNTSHPCFSFSPDSPF*RIMTVS
Trigger: TGATACAGTCATAATCCTCAAAAACGGAGAATCAGG...GGAAAATGAGAAGCATGGATGGGAAGTGTTGCATTGAGCATAATTTGGAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CCA 72 bp GGCTGGCACAGGAAGCGCAGTGCCTCCCCGGGGTGCTaGGGACACTGGGCCGCTTGGCGCTCCCGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: GWHRKRSASPGC*GHWAAWRSRAS
Trigger: GGAGGCCCGGGAGCGCCAAGCGGCCCAGTGTCCCCAGCACCCCGGGGAGGCACTGCGCTTCCTGTGCCAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306085.11
ENST00000412507.1
CDS GCA 72 bp CGCCACGCTGACAGCCACGCGGTCCCCGCTAGGCAGTaGCGCCACCGCGTGGCTGGCCTGGGAGAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: RHADSHAVPARQ*RHRVAGLGEAQ
Trigger: CTGAGCCTCTCCCAGGCCAGCCACGCGGTGGCGGCACTGCCTAGCGGGGACCGCGTGGCTGTCAGCGTGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS TCA 72 bp CTTCCAGGGAGAGGATCTCGGCCTCTCGCCCCAGGCTaGGTACCCGGCGGGCGAAGGCGGCTGCGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LPGRGSRPLAPG*VPGGRRRLRPW
Trigger: CCAGGGCCGCAGCCGCCTTCGCCCGCCGGGTACTCAGCCTGGGGCGAGAGGCCGAGATCCTCTCCCTGGAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 72 bp ACCACGCGGTGGGTGTGGGTCTGGCGGGTGCAGCGGTaGCCGTCGGCACAGGCCTGGCACAAGTCATCGGCA +
Preference number: 6 (lower is better)
Translates to: TTRWVWVWRVQR*PSAQAWHKSSA
Trigger: TGCCGATGACTTGTGCCAGGCCTGTGCCGACGGGCACCGCTGCACCCGCCAGACCCACACCCACCGCGTGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306085.11
ENST00000412507.1
CDS CAA 90 bp GGGCTGGTGGTCAGAAACACCAGCGCCCGCAGGCCCCGGCTGGCCTaGCCTCCAGGAATGAACCGGGTGGCCAGGCTGCCTTCCATATTG +
Preference number: 6 (lower is better)
Translates to: GLVVRNTSARRPRLA*PPGMNRVARLPSIL
Trigger: CAATATGGAAGGCAGCCTGGCCACCCGGTTCATTCCTGGAGGCAAGGCCAGCCGGGGCCTGCGGGCGCTGGTGTTTCTGACCACCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS TCA 72 bp GCGCCCGCAGGCCCCGGCTGGCCTTGCCTCCAGGAATaGACCGGGTGGCCAGGCTGCCTTCCATATTGTACA +
Preference number: 6 (lower is better)
Translates to: APAGPGWPCLQE*TGWPGCLPYCT
Trigger: TGTACAATATGGAAGGCAGCCTGGCCACCCGGTTCATTCCTGGAGGCAAGGCCAGCCGGGGCCTGCGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CCA 72 bp AGCCTCTCCCGAGCAGCTTCTTCGGCAGCCTCCACGTaGGCTCGTAGCTGCCCCAGCACCTCCTGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SLSRAASSAAST*ARSCPSTSCFW
Trigger: CCAGAAGCAGGAGGTGCTGGGGCAGCTACGAGCCCACGTGGAGGCTGCCGAAGAAGCTGCTCGGGAGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CAA 90 bp CGCAGGTCTCCACAGGCCCGGGCCTTCACCAGGTCCAGCAGCCCATaGACGAAGAAGTTGGTCTTGAAGGAGGCCACACCCTCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: RRSPQARAFTRSSSP*TKKLVLKEATPSGG
Trigger: GCCGCCCGAGGGTGTGGCCTCCTTCAAGACCAACTTCTTCGTCAATGGGCTGCTGGACCTGGTGAAGGCCCGGGCCTGTGGAGACCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306085.11
ENST00000412507.1
CDS CAA 90 bp GCCTTGCCTCCAGGAATGAACCGGGTGGCCAGGCTGCCTTCCATATaGTACACCTCCACGTGGCCCGCCACGCTGACAGCCACGCGGTCC +
Preference number: 6 (lower is better)
Translates to: ALPPGMNRVARLPSI*YTSTWPATLTATRS
Trigger: GGACCGCGTGGCTGTCAGCGTGGCGGGCCACGTGGAGGTGTACAATATGGAAGGCAGCCTGGCCACCCGGTTCATTCCTGGAGGCAAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 72 bp GCTGCTCCAGGCAGATTTTACAGGCCAGGAAGTCGCTaGTCAGGGCCTCCAGGAGGGAGGGCGAGGACCCGT +
Preference number: 6 (lower is better)
Translates to: AAPGRFYRPGSR*SGPPGGRARTR
Trigger: ACGGGTCCTCGCCCTCCCTCCTGGAGGCCCTGAGCAGCGACTTCCTGGCCTGTAAAATCTGCCTGGAGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306085.11
ENST00000412507.1
ENST00000467847.1
CDS GCA 72 bp AGGGGTGGTCCAGGTGGGGGTCTAGGCGGCACTCTCTaGACAGCAACTGTGAGCAGGGCTGGCACAGGAAGC +
Preference number: 6 (lower is better)
Translates to: RGGPGGGLGGTL*TATVSRAGTGS
Trigger: GCTTCCTGTGCCAGCCCTGCTCACAGTTGCTGTGCAGAGAGTGCCGCCTAGACCCCCACCTGGACCACCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306085.11
ENST00000412507.1
CDS GCA 72 bp CTGCACTTCGCCGTTGGGGTTGATGAGATAGAGCCGTaGGCTAGCGGAGAAGGCCACCGCGCTCTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: LHFAVGVDEIEP*ASGEGHRALQG
Trigger: GCCCTGCAGAGCGCGGTGGCCTTCTCCGCTAGCGCACGGCTCTATCTCATCAACCCCAACGGCGAAGTGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 72 bp TCGCCGTTGAGGGAGAAGCGTTTCAGTGCCCGGTTCTaGTCATCCGCCACCAGGATCTCCCGGGGACCGAAG +
Preference number: 6 (lower is better)
Translates to: SPLREKRFSARF*SSATRISRGPK
Trigger: CTTCGGTCCCCGGGAGATCCTGGTGGCGGATGAGCAGAACCGGGCACTGAAACGCTTCTCCCTCAACGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CAA 72 bp CCAGGAATGAACCGGGTGGCCAGGCTGCCTTCCATATaGTACACCTCCACGTGGCCCGCCACGCTGACAGCC +
Preference number: 6 (lower is better)
Translates to: PGMNRVARLPSI*YTSTWPATLTA
Trigger: GGCTGTCAGCGTGGCGGGCCACGTGGAGGTGTACAATATGGAAGGCAGCCTGGCCACCCGGTTCATTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS TCA 72 bp CCTCAGGGACCGGCACGGTGCCCTTGTAGTCGCCGTTaGGGGAGAAGCGTTTCAGTGCCCGGTTCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: PQGPARCPCSRR*GRSVSVPGSAH
Trigger: ATGAGCAGAACCGGGCACTGAAACGCTTCTCCCTCAACGGCGACTACAAGGGCACCGTGCCGGTCCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 72 bp GCCCTTGTAGTCGCCGTTGAGGGAGAAGCGTTTCAGTaGCCGGTTCTGCTCATCCGCCACCAGGATCTCCCG +
Preference number: 6 (lower is better)
Translates to: ALVVAVEGEAFQ*PVLLIRHQDLP
Trigger: CGGGAGATCCTGGTGGCGGATGAGCAGAACCGGGCACTGAAACGCTTCTCCCTCAACGGCGACTACAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 72 bp ACCACACTATTCTGCTGCCAGTCCGACCCCACGAAATaGCCCTGGGGGCTGGTGGTCAGAAACACCAGCGCC +
Preference number: 6 (lower is better)
Translates to: TTLFCCQSDPTK*PWGLVVRNTSA
Trigger: GGCGCTGGTGTTTCTGACCACCAGCCCCCAGGGGCATTTCGTGGGGTCGGACTGGCAGCAGAATAGTGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CCA 72 bp CTGCTCAGGGCCTCCAGGAGGGAGGGCGAGGACCCGTaGGAAACCATGCTGAATGGCCAGGAACTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: LLRASRREGEDP*ETMLNGQELPS
Trigger: AGAAGGAAGTTCCTGGCCATTCAGCATGGTTTCCCACGGGTCCTCGCCCTCCCTCCTGGAGGCCCTGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306085.11
ENST00000412507.1
ENST00000467847.1
CDS GCA 72 bp GTATGCAGGCAGGGCAGTGTCTTGGGTGCCCGCAGCTaGTCCAGGCAGATTTTACAGGCCAGGAAGTCGCTG +
Preference number: 6 (lower is better)
Translates to: VCRQGSVLGARS*SRQILQARKSL
Trigger: CAGCGACTTCCTGGCCTGTAAAATCTGCCTGGAGCAGCTGCGGGCACCCAAGACACTGCCCTGCCTGCATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306085.11
ENST00000412507.1
ENST00000467847.1
CDS GCA 72 bp ACCTGGCCCAGCCCATCACAGATTACCACACTATTCTaGTGCCAGTCCGACCCCACGAAATGCCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: TWPSPSQITTLF*CQSDPTKCPWG
Trigger: CCCCCAGGGGCATTTCGTGGGGTCGGACTGGCAGCAGAATAGTGTGGTAATCTGTGATGGGCTGGGCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CCA 72 bp ATCTTGACCTCTAGGATGGTGAGGGGGCCTGAGGCCTaGAGGCCGCCGTTGCTGGGTGCCTGGAAAAGAAAC +
Preference number: 6 (lower is better)
Translates to: ILTSRMVRGPEA*RPPLLGAWKRN
Trigger: GTTTCTTTTCCAGGCACCCAGCAACGGCGGCCTCCAGGCCTCAGGCCCCCTCACCATCCTAGAGGTCAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 72 bp TTGGCAGTAGGTATGCAGGCAGGGCAGTGTCTTGGGTaGCCGCAGCTGCTCCAGGCAGATTTTACAGGCCAG +
Preference number: 6 (lower is better)
Translates to: LAVGMQAGQCLG*PQLLQADFTGQ
Trigger: CTGGCCTGTAAAATCTGCCTGGAGCAGCTGCGGGCACCCAAGACACTGCCCTGCCTGCATACCTACTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306085.11
ENST00000412507.1
ENST00000467847.1
CDS GCA 72 bp CCAGCTCCGTCTTTCCCACCATCCTTCTGGGGCTGCTaGTCCTCAAAGGACAGCCGAAGAAGGTGGCAGTTC +
Preference number: 6 (lower is better)
Translates to: PAPSFPPSFWGC*SSKDSRRRWQF
Trigger: GAACTGCCACCTTCTTCGGCTGTCCTTTGAGGAGCAGCAGCCCCAGAAGGATGGTGGGAAAGACGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS GCA 72 bp GTACCAGCTCCGTCTTTCCCACCATCCTTCTGGGGCTaGTGCTCCTCAAAGGACAGCCGAAGAAGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: VPAPSFPPSFWG*CSSKDSRRRWQ
Trigger: CTGCCACCTTCTTCGGCTGTCCTTTGAGGAGCAGCAGCCCCAGAAGGATGGTGGGAAAGACGGAGCTGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CCA 72 bp CTCAGTGTCCCCAGTCCACAGGCCTTGTGGCAAACATaGTGGAAGCCCTCCTGTGTGCACAGGTACTGGGGT +
Preference number: 6 (lower is better)
Translates to: LSVPSPQALWQT*WKPSCVHRYWG
Trigger: ACCCCAGTACCTGTGCACACAGGAGGGCTTCCACCATGTTTGCCACAAGGCCTGTGGACTGGGGACACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467847.1
CDS CAA 90 bp TCCAGATTCGGCCCCAGGGCTGGGCTGGGCTCCCGGGAAATTGACTaGAGCCTGCCTTTGAACTTTTTCTTCTTGTTGGGTCTGCCACCC +
Preference number: 6 (lower is better)
Translates to: SRFGPRAGLGSREID*SLPLNFFFLLGLPP
Trigger: GGGTGGCAGACCCAACAAGAAGAAAAAGTTCAAAGGCAGGCTCAAGTCAATTTCCCGGGAGCCCAGCCCAGCCCTGGGGCCGAATCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS TCA 72 bp GAGAACGGACCCGAAAGATGTGGATGGTCCCGTTACTaGGGGACACGACCAGGTACCTGCCATCCACCATGG +
Preference number: 6 (lower is better)
Translates to: ENGPERCGWSRY*GTRPGTCHPPW
Trigger: CCATGGTGGATGGCAGGTACCTGGTCGTGTCCCTCAGTAACGGGACCATCCACATCTTTCGGGTCCGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS TCA 72 bp GGAGGGACCCCTTCGGGTCCAGGATCACCACCTTGTTaGCTTCTCGAAGGGTCAGAAAGATGTAGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: GGTPSGPGSPPC*LLEGSERCSPS
Trigger: AGAAGGGCTACATCTTTCTGACCCTTCGAGAAGTCAACAAGGTGGTGATCCTGGACCCGAAGGGGTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CAA 72 bp GGGCTGGGCTCCCGGGAAATTGACTTGAGCCTGCCTTaGAACTTTTTCTTCTTGTTGGGTCTGCCACCCCTG +
Preference number: 6 (lower is better)
Translates to: GLGSREIDLSLP*NFFFLLGLPPL
Trigger: CAGGGGTGGCAGACCCAACAAGAAGAAAAAGTTCAAAGGCAGGCTCAAGTCAATTTCCCGGGAGCCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306085.11
CDS CAA 90 bp GCCTTAGCTAATAATCGAATCCTCAGTGTCCCCAGTCCACAGGCCTaGTGGCAAACATGGTGGAAGCCCTCCTGTGTGCACAGGTACTGG +
Preference number: 6 (lower is better)
Translates to: ALANNRILSVPSPQA*WQTWWKPSCVHRYW
Trigger: CCAGTACCTGTGCACACAGGAGGGCTTCCACCATGTTTGCCACAAGGCCTGTGGACTGGGGACACTGAGGATTCGATTATTAGCTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467847.1
CDS CCA 72 bp ACATCCAGCAAACGTAAAAATGTCAGTGCTACTTGTTaGGTCAGACCTGTGAGAACTGACAAGACCAGGAGT +
Preference number: 6 (lower is better)
Translates to: TSSKRKNVSATC*VRPVRTDKTRS
Trigger: ACTCCTGGTCTTGTCAGTTCTCACAGGTCTGACCCAACAAGTAGCACTGACATTTTTACGTTTGCTGGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467847.1