RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM54 (Homo sapiens)

Ensembl gene IDs: ENSG00000138100

Ensembl transcript IDs: ENST00000296098.4, ENST00000380075.7, ENST00000485306.1, ENST00000488321.1

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGGAAGGGCAGGATGGTGGGCGGGTCGCCTTCGAAGCCCAGGCTaGGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGA +
Preference number: 1 (lower is better)
Translates to: LGRAGWWAGRLRSPG*GVGQRKEIRVWDAR
Trigger: TCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACCCGCCCACCATCCTGCCCTTCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR TCA 90 bp GGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTaGGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTC +
Preference number: 1 (lower is better)
Translates to: GQRKEIRVWDARVLY*DPPGAGADLGDAAV
Trigger: GACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR CCA 90 bp ACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTaGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCG +
Preference number: 1 (lower is better)
Translates to: TLEFFIEILPGPAPI*VMLRSLRRSSPTLA
Trigger: CGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR TCA 90 bp CGGGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGCGGCGCCGATTTGGGTaGTGCTGCGGTCTCTGCGCA +
Preference number: 2 (lower is better)
Translates to: RVAFEAQAAGLGSERRYGRRRFG*CCGLCA
Trigger: TGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCG...CCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CCA 90 bp GGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCGGGCCGGCGCCGATTTaGGTGATGCTGCGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: GRLRSPGCGVGQRKEIRVGPAPI*VMLRSL
Trigger: CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC...GACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CCA 90 bp TTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGGGGCCGGCGCCGATTTaGGTGATGCTGCGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: FEAQAAGLGSERRYGSGTGPAPI*VMLRSL
Trigger: CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC...CGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CCA 90 bp GGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGTGACGGTCTCAGGTTCTaGGAAGGGCAGGATGGTGGG +
Preference number: 2 (lower is better)
Translates to: GRWAHQFAPGITEVPNRGDGLRF*EGQDGG
Trigger: CCCACCATCCTGCCCTTCCCAGAACCTGAGACCGTC...ACCCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CCA 90 bp AGTACTGAAGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTCCCAGGCTGCGGGGTTaGGCAGCGAAAGGAGATACG +
Preference number: 2 (lower is better)
Translates to: STEDPLAFVVEAGQSQQRPRLRG*AAKGDT
Trigger: CGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGG...ACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCTTCAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CCA 90 bp GCTTTCAGCCAGGTCAGCCAGGTGCATGTGGACCCCAAGGGTCCCCAAATCCCCAAGGAGATACGGGTCTaGGACGCTCGAGTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: AFSQVSQVHVDPKGPQIPKEIRV*DARVLY
Trigger: ATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTT...GGGGATTTGGGGACCCTTGGGGTCCACATGCACCTGGCTGACCTGGCTGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCAAGGAGATACGGGTCTaGGACGCTCGAGTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPKEIRV*DARVLY
Trigger: ATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTT...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR GCA 72 bp GCAGGATGGTGGGCGGGTCGCCTTCGAAGCCCAGGCTaGGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: AGWWAGRLRSPG*GVGQRKEIRVW
Trigger: CCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACCCGCCCACCATCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CAA 90 bp CAGGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGGGGCCGGCGCCGATTaGGGTGATGCTGCGGTCTCT +
Preference number: 3 (lower is better)
Translates to: QGAGLTSSLLASQRCPIGGAGAD*GDAAVS
Trigger: AGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCC...CCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCCTG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CAA 90 bp CAGGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGCCCAGGCTGCGGGGTaGGGCAGCGAAAGGAGATAC +
Preference number: 3 (lower is better)
Translates to: QGAGLTSSLLASQRCPIGAQAAG*GSERRY
Trigger: GTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGC...CCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CAA 90 bp GGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGTGCCCAGGCTGCGGGGTaGGGCAGCGAAAGGAGATAC +
Preference number: 3 (lower is better)
Translates to: GRWAHQFAPGITEVPNRGAQAAG*GSERRY
Trigger: GTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGC...ACCCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CAA 90 bp GGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCCGCTCGAGTTCTTTATaGAGATCCTCCCGGGGCCGG +
Preference number: 3 (lower is better)
Translates to: GRLRSPGCGVGQRKEIRVRSSSL*RSSRGR
Trigger: CCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCG...GACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR CCA 72 bp TTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTaGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCG +
Preference number: 3 (lower is better)
Translates to: FFIEILPGPAPI*VMLRSLRRSSP
Trigger: CGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR-3UTR CAA 90 bp AGTACTGAAGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGGCCGGCGCCGATTaGGGTGATGCTGCGGTCTCT +
Preference number: 3 (lower is better)
Translates to: STEDPLAFVVEAGQSQQRGAGAD*GDAAVS
Trigger: AGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCC...ACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCTTCAGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
3UTR TCA 72 bp AAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTaGGATCCTCCCGGGGCCGGCGCCGATTTGGGTGAT +
Preference number: 3 (lower is better)
Translates to: KEIRVWDARVLY*DPPGAGADLGD
Trigger: ATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp AGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGGTCGGCGCAGGCTCCCGGGCCAGCGCCTaGAGCAGCTCACCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: RSSPTLARALEQGRVGAGSRASA*SSSPLR
Trigger: GCGCAAGGGTGAGCTGCTGCAGGCGCTGGCCCGGGA...GCCTGCGCCGACCCGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGCGCCATACTGACGGATaGGGCCGCGGACGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: AVSAQILPDSSAGSRAGSRHTDG*GRGRAA
Trigger: TGCAGCGCGTCCGCGGCCTCATCCGTCAGTATGGCG...CGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp AGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGGTCGGCGCAGGCGCCTGGCCTGGGCCCTaGTCCTGGCCTTCACTCACT +
Preference number: 4 (lower is better)
Translates to: RSSPTLARALEQGRVGAGAWPGP*SWPSLT
Trigger: AGTGAGTGAAGGCCAGGAGCAGGGCCCAGGCCAGGC...GCCTGCGCCGACCCGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCCCTCGGTGGTCGTaGCTGGCCTGGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: EILPGPAPIWVMLRSLRRSPRWS*LAWALL
Trigger: GAGCAGGGCCCAGGCCAGGCACGACCACCGAGGGGA...TCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCATGCTCTCATAGCCTaGCTCCGGCCGCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PPGAGADLGDAAVSAQILHALIA*LRPPCQ
Trigger: CTGGCAGGGCGGCCGGAGCCAGGCTATGAGAGCATG...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCGGGCCGGCGCCGATTTaGGTGATGCTGCGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PPGAGADLGDAAVSAQILGPAPI*VMLRSL
Trigger: CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCGGAAGGGCAGGATGGTaGGCGGGTCGCCTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PPGAGADLGDAAVSAQILGRAGW*AGRLRS
Trigger: GCTTCGAAGGCGACCCGCCCACCATCCTGCCCTTCC...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGCGGAAACGGCCTCCTaGAGACACAGTGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: AVSAQILPDSSAGSRAGSAETAS*RHSGGA
Trigger: GGCTCCACCACTGTGTCTTCAGGAGGCCGTTTCCGC...CGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCGGCGCCGATTTGGGTaGTGCTGCGGTCTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GPAPIWVMLRSLRRSSPTRRRFG*CCGLCA
Trigger: TGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCG...AGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCTTCGAAGCCCAGGCTaGGGGGTTGGGCAGCGAAAG +
Preference number: 4 (lower is better)
Translates to: PPGAGADLGDAAVSAQILLRSPG*GVGQRK
Trigger: CTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAG...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CGGGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGCCGGAAGCGCCTGGCTaGAAGTCGATGGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RVAFEAQAAGLGSERRYGPEAPG*KSMVRS
Trigger: GCTGCGGACCATCGACTTCCAGCCAGGCGCTTCCGG...CCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTCCCCGGAAGCGCCTaGCTGGAAGTCGATGGTCCG +
Preference number: 4 (lower is better)
Translates to: GPAPIWVMLRSLRRSSPTLPGSA*LEVDGP
Trigger: CGGACCATCGACTTCCAGCCAGGCGCTTCCGGGGAG...AGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCAGGCTGCGGGGTTaGGCAGCGAAAGGAGATACG +
Preference number: 4 (lower is better)
Translates to: PPGAGADLGDAAVSAQILPRLRG*AAKGDT
Trigger: CGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGG...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGCCATACTGACGGATaGGGCCGCGGACGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: APIWVMLRSLRRSSPTLARHTDG*GRGRAA
Trigger: TGCAGCGCGTCCGCGGCCTCATCCGTCAGTATGGCG...CGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp CGGGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGGTGGAGCCCCGGGACTaGCATAGAGGATTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: RVAFEAQAAGLGSERRYGVEPRD*HRGFEA
Trigger: GGCCTCGAATCCTCTATGGCAGTCCCGGGGCTCCAC...CCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGACGGTCTCAGGTTCTaGGAAGGGCAGGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVSAQILPDSSAGSRAGSDGLRF*EGQDGG
Trigger: CCCACCATCCTGCCCTTCCCAGAACCTGAGACCGTC...CGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp TTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGAGGTGGTCGCCATACTaGCGGATGAGGCCGCGGACG +
Preference number: 4 (lower is better)
Translates to: FEAQAAGLGSERRYGSGTRWSPY*RMRPRT
Trigger: CGTCCGCGGCCTCATCCGTCAGTATGGCGACCACCT...CGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp TTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGGCCTGGCCTGGGCCCTaGTCCTGGCCTTCACTCACT +
Preference number: 4 (lower is better)
Translates to: FEAQAAGLGSERRYGSGTAWPGP*SWPSLT
Trigger: AGTGAGTGAAGGCCAGGAGCAGGGCCCAGGCCAGGC...CGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATGCTCAGCCTTGGAGTaGAGCGGCCTGGATGACTCC +
Preference number: 4 (lower is better)
Translates to: EILPGPAPIWVMLRSLRRCSALE*SGLDDS
Trigger: GGAGTCATCCAGGCCGCTGCACTCCAAGGCTGAGCA...TCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp CGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGTCCTCGCACATGAGGTaGTGCTCAGCCTTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: RSLRRSSPTLARALEQGRSSHMR*CSALEC
Trigger: GCACTCCAAGGCTGAGCAGCACCTCATGTGCGAGGA...CCGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp CGGGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGGCGCTCCTCCAGCACTaGGCACAGGCTCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: RVAFEAQAAGLGSERRYGALLQH*AQALKP
Trigger: AGGTTTGAGAGCCTGTGCGCAGTGCTGGAGGAGCGC...CCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGTGCAGCAGCTCACCCTTaGGCTCCTCCAGCACTGCGC +
Preference number: 4 (lower is better)
Translates to: GRWAHQFAPGITEVPNRGAAAHP*APPALR
Trigger: GCGCAGTGCTGGAGGAGCGCAAGGGTGAGCTGCTGC...ACCCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp CAGGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGTGCAGCTTCTCCTCTTaGTCCCGGGCCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QGAGLTSSLLASQRCPIGCSFSS*SRASAC
Trigger: GCAGGCGCTGGCCCGGGAGCAAGAGGAGAAGCTGCA...CCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGTTGCAGCTTCTCCTCTTaGTCCCGGGCCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRWAHQFAPGITEVPNRGCSFSS*SRASAC
Trigger: GCAGGCGCTGGCCCGGGAGCAAGAGGAGAAGCTGCA...ACCCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGAGGCCGCGGACGCGCTaGAGCTTCTCCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: APIWVMLRSLRRSSPTLARPRTR*SFSSCS
Trigger: GGAGCAAGAGGAGAAGCTGCAGCGCGTCCGCGGCCT...CGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGAGTTCATCCCCTCGGTaGTCGTGCCTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: APIWVMLRSLRRSSPTLASSSPR*SCLAWA
Trigger: GGCCCAGGCCAGGCACGACCACCGAGGGGATGAACT...CGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCTGGCTGGAAGTCGATaGTCCGCAGCATTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PPGAGADLGDAAVSAQILLAGSR*SAAFRP
Trigger: TGGCCGAAATGCTGCGGACCATCGACTTCCAGCCAG...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCTCCCCGGAAGCGCCTaGCTGGAAGTCGATGGTCCG +
Preference number: 4 (lower is better)
Translates to: APIWVMLRSLRRSSPTLALPGSA*LEVDGP
Trigger: CGGACCATCGACTTCCAGCCAGGCGCTTCCGGGGAG...CGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CAGGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGGGCCGGCGCCGATTTaGGTGATGCTGCGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QGAGLTSSLLASQRCPIGGPAPI*VMLRSL
Trigger: CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC...CCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp TTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTGGGAAGGGCAGGATaGTGGGCGGGTCGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: FEAQAAGLGSERRYGSGTLGRAG*WAGRLR
Trigger: TCGAAGGCGACCCGCCCACCATCCTGCCCTTCCCAG...CGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp CGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGACAGTCTCTACTTTCTaGTCTGCACCCTCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSLRRSSPTLARALEQGRTVSTF*SAPSPG
Trigger: GCCTGGCGAGGGTGCAGAGCAGAAAGTAGAGACTGT...CCGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGCACGCGGTCATTGCCTaGCACCAGCATCGCGATGCC +
Preference number: 4 (lower is better)
Translates to: ADLGDAAVSAQILPDSSAHAVIA*HQHRDA
Trigger: GGCATCGCGATGCTGGTGGCAGGCAATGACCGCGTG...CGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGTGTGTGATCACTGCTTaGACGCGGTCATTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AVSAQILPDSSAGSRAGSCVITA*TRSLPA
Trigger: GGCAGGCAATGACCGCGTGCAAGCAGTGATCACACA...CGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCGCGCTCCTCCAGCACTaGGCACAGGCTCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: GRLRSPGCGVGQRKEIRVALLQH*AQALKP
Trigger: AGGTTTGAGAGCCTGTGCGCAGTGCTGGAGGAGCGC...GACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp ACTGAAGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGTCCCGGGCCAGCGCCTaGAGCAGCTCACCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: TEDPLAFVVEAGQSQQRGSRASA*SSSPLR
Trigger: GCGCAAGGGTGAGCTGCTGCAGGCGCTGGCCCGGGA...CCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCTTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp AGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGGTCGGCGCAGGCAGCATTTCGGCCACGTaGTCCACCCTTACGGTGAAT +
Preference number: 4 (lower is better)
Translates to: RSSPTLARALEQGRVGAGSISAT*STLTVN
Trigger: ATTCACCGTAAGGGTGGAGCACGTGGCCGAAATGCT...GCCTGCGCCGACCCGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCTTTCAGCCAGGTCAGCCAGGTGCATGTGGACCCCAAGGGTCCCCAAATCCCCAGTTCATCCCCTCGGTaGTCGTGCCTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AFSQVSQVHVDPKGPQIPSSSPR*SCLAWA
Trigger: GGCCCAGGCCAGGCACGACCACCGAGGGGATGAACT...GGGGATTTGGGGACCCTTGGGGTCCACATGCACCTGGCTGACCTGGCTGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp AGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGGTCGGCGCAGGCAGAGGATTCGAGGCCTaGAAGACGTCGTTGGCACAT +
Preference number: 4 (lower is better)
Translates to: RSSPTLARALEQGRVGAGRGFEA*KTSLAH
Trigger: ATGTGCCAACGACGTCTTCCAGGCCTCGAATCCTCT...GCCTGCGCCGACCCGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGCTCCTGAAGACACAGTaGTGGAGCCCCGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: ADLGDAAVSAQILPDSSALLKTQ*WSPGTA
Trigger: GGCAGTCCCGGGGCTCCACCACTGTGTCTTCAGGAG...CGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGTCTCATGCCTGCACGATaGGCAGCGGAAACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRWAHQFAPGITEVPNRGLMPAR*AAETAS
Trigger: GGAGGCCGTTTCCGCTGCCCATCGTGCAGGCATGAG...ACCCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCACCTCACAGTCCTTGTaGGCACCGAAGACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PPGAGADLGDAAVSAQILTSQSL*APKTLQ
Trigger: CTGCAAGGTCTTCGGTGCCCACAAGGACTGTGAGGT...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTGGCTGGAAGTCGATaGTCCGCAGCATTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GPAPIWVMLRSLRRSSPTLAGSR*SAAFRP
Trigger: TGGCCGAAATGCTGCGGACCATCGACTTCCAGCCAG...AGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGCTCCACCCTTACGGTaGATTGCTCCATGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: AVSAQILPDSSAGSRAGSAPPLR*IAPCSH
Trigger: ATGAGAGCATGGAGCAATTCACCGTAAGGGTGGAGC...CGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGTGCTCGAGTTCTTTATTaGGATCCTCCCGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GRWAHQFAPGITEVPNRGARVLY*DPPGAG
Trigger: GCCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGC...ACCCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp TTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGTGGCTCCGGCCGCCCTaGCAGCTCCACCTTCGACAT +
Preference number: 4 (lower is better)
Translates to: FIEILPGPAPIWVMLRSLWLRPP*QLHLRH
Trigger: ATGTCGAAGGTGGAGCTGGCAGGGCGGCCGGAGCCA...CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGACCTGGAAGACGTCGTTaGCACATTTGCGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: EILPGPAPIWVMLRSLRRPGRRR*HICGTG
Trigger: ACCTGTGCCGCAAATGTGCCAACGACGTCTTCCAGG...TCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CGGGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGGTAAATGGTGGGCAGTaGGGCCACCTCACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: RVAFEAQAAGLGSERRYGVNGGQ*GHLTVL
Trigger: AAGGACTGTGAGGTGGCCCCACTGCCCACCATTTAC...CCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCGGCGTTTGTAAATGGTaGGCAGTGGGGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: GRLRSPGCGVGQRKEIRVGVCKW*AVGPPH
Trigger: GTGAGGTGGCCCCACTGCCCACCATTTACAAACGCC...GACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCGGCTCTTCCATGGACTaGATGGCAGACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GRLRSPGCGVGQRKEIRVGSSMD*MADSTS
Trigger: GCTGGTGGAGTCTGCCATCCAGTCCATGGAAGAGCC...GACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGCTCTTCCATGGACTaGATGGCAGACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: DAAVSAQILPDSSAGSRAGSSMD*MADSTS
Trigger: GCTGGTGGAGTCTGCCATCCAGTCCATGGAAGAGCC...TGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCCCGGAAGCGCCTGGCTaGAAGTCGATGGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPPEAPG*KSMVRS
Trigger: GCTGCGGACCATCGACTTCCAGCCAGGCGCTTCCGG...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGGGAAGGGCAGGATGGTaGGCGGGTCGCCTTCGAAGC +
Preference number: 4 (lower is better)
Translates to: EFFIEILPGPAPIWVMLRGRAGW*AGRLRS
Trigger: GCTTCGAAGGCGACCCGCCCACCATCCTGCCCTTCC...CCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGCTGGGAAGGGCAGGATaGTGGGCGGGTCGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: EFFIEILPGPAPIWVMLRLGRAG*WAGRLR
Trigger: TCGAAGGCGACCCGCCCACCATCCTGCCCTTCCCAG...CCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTTCACCAGTTCGCTCCTaGCATCACAGAGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: GPAPIWVMLRSLRRSSPTSPVRS*HHRGAQ
Trigger: TTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGA...AGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGGCGGAAACGGCCTCCTaGAGACACAGTGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: EFFIEILPGPAPIWVMLRAETAS*RHSGGA
Trigger: GGCTCCACCACTGTGTCTTCAGGAGGCCGTTTCCGC...CCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCTCCAGGTTGTCCATaGTGTGTGCATCCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: EILPGPAPIWVMLRSLRRSPGCP*CVHPLA
Trigger: TGCTAGGGGATGCACACAGCATGGACAACCTGGAGA...TCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGGTGGAGCCCCGGGACTaGCATAGAGGATTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: EFFIEILPGPAPIWVMLRVEPRD*HRGFEA
Trigger: GGCCTCGAATCCTCTATGGCAGTCCCGGGGCTCCAC...CCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GCTTTCAGCCAGGTCAGCCAGGTGCATGTGGACCCCAAGGGTCCCCAAATCCCCTGCTCAGCCTTGGAGTaGAGCGGCCTGGATGACTCC +
Preference number: 4 (lower is better)
Translates to: AFSQVSQVHVDPKGPQIPCSALE*SGLDDS
Trigger: GGAGTCATCCAGGCCGCTGCACTCCAAGGCTGAGCA...GGGGATTTGGGGACCCTTGGGGTCCACATGCACCTGGCTGACCTGGCTGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGTTCCTCGCACATGAGGTaGTGCTCAGCCTTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: GRWAHQFAPGITEVPNRGSSHMR*CSALEC
Trigger: GCACTCCAAGGCTGAGCAGCACCTCATGTGCGAGGA...ACCCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp TTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCGTGGGAAGCAGCAGCTCACCCTTaGGCTCCTCCAGCACTGCGC +
Preference number: 4 (lower is better)
Translates to: LAFVVEAGQSQQRGNPWEAAAHP*APPALR
Trigger: GCGCAGTGCTGGAGGAGCGCAAGGGTGAGCTGCTGC...TTCCCACGGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp TTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCCTGGGCCCTGCTCCTaGCCTTCACTCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: FIEILPGPAPIWVMLRSLPGPCS*PSLTAC
Trigger: ACAGGCAGTGAGTGAAGGCCAGGAGCAGGGCCCAGG...CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp TTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCTCCTGAAGACACAGTaGTGGAGCCCCGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: FIEILPGPAPIWVMLRSLLLKTQ*WSPGTA
Trigger: GGCAGTCCCGGGGCTCCACCACTGTGTCTTCAGGAG...CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTCTGGCGTTTGTAAATaGTGGGCAGTGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GRLRSPGCGVGQRKEIRVSGVCK*WAVGPP
Trigger: AGGTGGCCCCACTGCCCACCATTTACAAACGCCAGA...GACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCTTGTCCTCGATAGTCTaGCACACCTCCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: PPGAGADLGDAAVSAQILLSSIV*HTSSIC
Trigger: ACAGATGGAGGAGGTGTGCCAGACTATCGAGGACAA...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp TTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCCCAGGCTGCGGGGTTaGGCAGCGAAAGGAGATACG +
Preference number: 4 (lower is better)
Translates to: FIEILPGPAPIWVMLRSLPRLRG*AAKGDT
Trigger: CGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGG...CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCTTTCAGCCAGGTCAGCCAGGTGCATGTGGACCCCAAGGGTCCCCAAATCCCCGGGAACAAAATGCTGTaGGGGGCTCCGAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: AFSQVSQVHVDPKGPQIPGNKML*GAPRQR
Trigger: CCGCTGTCTCGGAGCCCCCCACAGCATTTTGTTCCC...GGGGATTTGGGGACCCTTGGGGTCCACATGCACCTGGCTGACCTGGCTGAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCGCAGTCACAGCAGCGTaGGAACCCGTGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPAVTAA*EPVGRW
Trigger: CCACCTTCCCACGGGTTCCCACGCTGCTGTGACTGC...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCCATGCTCCTCGCACATaGGGTGCTGCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPHAPRT*GAAQPW
Trigger: CCAAGGCTGAGCAGCACCTCATGTGCGAGGAGCATG...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp CGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGGTGGTCGCCATACTaGCGGATGAGGCCGCGGACG +
Preference number: 4 (lower is better)
Translates to: RGWAAKGDTGLGRSSSLLRWSPY*RMRPRT
Trigger: CGTCCGCGGCCTCATCCGTCAGTATGGCGACCACCT...CAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp CGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGCGGCGCCGATTTGGGTaGTGCTGCGGTCTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: RGWAAKGDTGLGRSSSLLRRRFG*CCGLCA
Trigger: TGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCG...CAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGGCTCGAGTTCTTTATTaGGATCCTCCCGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: EFFIEILPGPAPIWVMLRARVLY*DPPGAG
Trigger: GCCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGC...CCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp CGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGATCTTCTCTTCTTCATaGTCCTCGCACATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RSLRRSSPTLARALEQGRIFSSS*SSHMRC
Trigger: GCACCTCATGTGCGAGGAGCATGAAGAAGAGAAGAT...CCGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCTTTAACAACTGCTTCTaGCTCCGGCTATTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PPGAGADLGDAAVSAQILFNNCF*LRLLSS
Trigger: CGAGGACAATAGCCGGAGGCAGAAGCAGTTGTTAAA...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTAGGCCGCGGACGCGCTaGAGCTTCTCCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: AGLGSERRYGSGTLEFFIRPRTR*SFSSCS
Trigger: GGAGCAAGAGGAGAAGCTGCAGCGCGTCCGCGGCCT...AATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCCCTTCCTCGCTTAGATaGCCTCTGGATTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GRLRSPGCGVGQRKEIRVPSSLR*PLDSLL
Trigger: CAGAAGGGAATCCAGAGGCCATCTAAGCGAGGAAGG...GACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTCTGCGAGGCTAAGATaGGAGGATCACTTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: GRLRSPGCGVGQRKEIRVSARLR*EDHLSS
Trigger: CGAGCTCAAGTGATCCTCCCATCTTAGCCTCGCAGA...GACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296098.4
CDS-3UTR CCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCGACGGTCTCAGGTTCTaGGAAGGGCAGGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPDGLRF*EGQDGG
Trigger: CCCACCATCCTGCCCTTCCCAGAACCTGAGACCGTC...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCGGGAACAAAATGCTGTaGGGGGCTCCGAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPGNKML*GAPRQR
Trigger: CCGCTGTCTCGGAGCCCCCCACAGCATTTTGTTCCC...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCCGGTGGCCCCGACCTTATTaGTCAGCTCCTTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GDTGLGRSSSLLRSSRGRWPRPY*SAPWPA
Trigger: AGCAGGCCAAGGAGCTGATCAATAAGGTCGGGGCCA...CCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGATGGGGCAGATGAGCTaGTTCTCCAGGTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: ADLGDAAVSAQILPDSSAMGQMS*FSRLSM
Trigger: CATGGACAACCTGGAGAAGCAGCTCATCTGCCCCAT...CGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp TTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGATGGGGCAGATGAGCTaGTTCTCCAGGTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: FEAQAAGLGSERRYGSGTMGQMS*FSRLSM
Trigger: CATGGACAACCTGGAGAAGCAGCTCATCTGCCCCAT...CGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCGCACATGAGGTGCTaGTCAGCCTTGGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EFFIEILPGPAPIWVMLRSHMRC*SALECS
Trigger: GCTGCACTCCAAGGCTGAGCAGCACCTCATGTGCGA...CCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCTCGCACATGAGGTGCTaGTCAGCCTTGGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPSHMRC*SALECS
Trigger: GCTGCACTCCAAGGCTGAGCAGCACCTCATGTGCGA...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGCATCTGTGTGATCACTaGTTGCACGCGGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: ADLGDAAVSAQILPDSSAHLCDH*LHAVIA
Trigger: GGCAATGACCGCGTGCAAGCAGTGATCACACAGATG...CGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp CAGGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGCATCTGTGTGATCACTaGTTGCACGCGGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: QGAGLTSSLLASQRCPIGHLCDH*LHAVIA
Trigger: GGCAATGACCGCGTGCAAGCAGTGATCACACAGATG...CCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATTTAACAACTGCTTCTaGCTCCGGCTATTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: EILPGPAPIWVMLRSLRRFNNCF*LRLLSS
Trigger: CGAGGACAATAGCCGGAGGCAGAAGCAGTTGTTAAA...TCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGCCAGGTCAGCCAGGTaGATGTGGACCCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: AGLGSERRYGSGTLEFFIARSAR*MWTPRV
Trigger: GACCCTTGGGGTCCACATGCACCTGGCTGACCTGGC...AATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGAGAGGATTCGAGGCCTaGAAGACGTCGTTGGCACAT +
Preference number: 4 (lower is better)
Translates to: APIWVMLRSLRRSSPTLARGFEA*KTSLAH
Trigger: ATGTGCCAACGACGTCTTCCAGGCCTCGAATCCTCT...CGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTCTCATGCCTGCACGATaGGCAGCGGAAACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AGLGSERRYGSGTLEFFILMPAR*AAETAS
Trigger: GGAGGCCGTTTCCGCTGCCCATCGTGCAGGCATGAG...AATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGGTGCTGCTCAGCCTTaGAGTGCAGCGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: AGLGSERRYGSGTLEFFIGAAQP*SAAAWM
Trigger: CATCCAGGCCGCTGCACTCCAAGGCTGAGCAGCACC...AATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCATTTGTGGCTCTTCCATaGACTGGATGGCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: DAAVSAQILPDSSAGSRAFVALP*TGWQTP
Trigger: TGGAGTCTGCCATCCAGTCCATGGAAGAGCCACAAA...TGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTAAGGAGATACGGGTCTaGGACGCTCGAGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GPAPIWVMLRSLRRSSPTKEIRV*DARVLY
Trigger: ATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTT...AGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCTCAGCCAGGTGCATGTaGACCCCAAGGGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPSARCM*TPRVPK
Trigger: TTTGGGGACCCTTGGGGTCCACATGCACCTGGCTGA...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCGTGCAGCGGCCTGGATaGCTCCTGCTTGTAAATGTC +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPVQRPG*LLLVNV
Trigger: GACATTTACAAGCAGGAGTCATCCAGGCCGCTGCAC...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGGATGGGAGGATCACTTaGGCTCGGGAGATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: EFFIEILPGPAPIWVMLRDGRIT*AREIKA
Trigger: AGCCTTGATCTCCCGAGCTCAAGTGATCCTCCCATC...CCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296098.4
CDS-3UTR TCA 90 bp ACTGAAGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGTGGCCCCGACCTTATTaGTCAGCTCCTTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TEDPLAFVVEAGQSQQRGWPRPY*SAPWPA
Trigger: AGCAGGCCAAGGAGCTGATCAATAAGGTCGGGGCCA...CCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCACAGTCTCTACTTTCTaGTCTGCACCCTCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPTVSTF*SAPSPG
Trigger: GCCTGGCGAGGGTGCAGAGCAGAAAGTAGAGACTGT...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAATCTTCTCTTCTTCATaGTCCTCGCACATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: DAAVSAQILPDSSAGSRAIFSSS*SSHMRC
Trigger: GCACCTCATGTGCGAGGAGCATGAAGAAGAGAAGAT...TGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCTGTGTGATCACTGCTTaGACGCGGTCATTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPCVITA*TRSLPA
Trigger: GGCAGGCAATGACCGCGTGCAAGCAGTGATCACACA...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp TGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTGGCTCCGGCCGCCCTaGCAGCTCCACCTTCGACAT +
Preference number: 4 (lower is better)
Translates to: WAAKGDTGLGRSSSLLRSWLRPP*QLHLRH
Trigger: ATGTCGAAGGTGGAGCTGGCAGGGCGGCCGGAGCCA...GGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCTTCGAAGCCCAGGCTaGGGGGTTGGGCAGCGAAAG +
Preference number: 4 (lower is better)
Translates to: ERRYGSGTLEFFIEILPGLRSPG*GVGQRK
Trigger: CTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAG...CCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGACTGGATTCCCTTCTGTaGCTCACTCTTGAAATAGCT +
Preference number: 4 (lower is better)
Translates to: EILPGPAPIWVMLRSLRRLDSLL*LTLEIA
Trigger: AGCTATTTCAAGAGTGAGCCACAGAAGGGAATCCAG...TCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGACCTCACAGTCCTTGTaGGCACCGAAGACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: EFFIEILPGPAPIWVMLRTSQSL*APKTLQ
Trigger: CTGCAAGGTCTTCGGTGCCCACAAGGACTGTGAGGT...CCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGACATGCTCTCATAGCCTaGCTCCGGCCGCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GWAAKGDTGLGRSSSLLRHALIA*LRPPCQ
Trigger: CTGGCAGGGCGGCCGGAGCCAGGCTATGAGAGCATG...TCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGGCTCCACCCTTACGGTaGATTGCTCCATGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: EFFIEILPGPAPIWVMLRAPPLR*IAPCSH
Trigger: ATGAGAGCATGGAGCAATTCACCGTAAGGGTGGAGC...CCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGCTTTTGTTTCCCAAATaGCTCTCTCTTGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: AVSAQILPDSSAGSRAGSLLFPK*LSLVHS
Trigger: AGAGTGAACAAGAGAGAGTCATTTGGGAAACAAAAG...CGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380075.7
CDS-3UTR GCA 90 bp AGTACTGAAGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTTCCAGGACAACCTCATaGCTGCACGATGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: STEDPLAFVVEAGQSQQRSRTTS*LHDGQR
Trigger: CCGCTGCCCATCGTGCAGGCATGAGGTTGTCCTGGA...ACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCTTCAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCCGGCCTTCCTCGCTTAGATaGCCTCTGGATTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GDTGLGRSSSLLRSSRGRPSSLR*PLDSLL
Trigger: CAGAAGGGAATCCAGAGGCCATCTAAGCGAGGAAGG...CCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp TGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCGGTGCTGCTCAGCCTTaGAGTGCAGCGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: WAAKGDTGLGRSSSLLRSGAAQP*SAAAWM
Trigger: CATCCAGGCCGCTGCACTCCAAGGCTGAGCAGCACC...GGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp ACTGAAGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGGTAAATGGTGGGCAGTaGGGCCACCTCACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: TEDPLAFVVEAGQSQQRGVNGGQ*GHLTVL
Trigger: AAGGACTGTGAGGTGGCCCCACTGCCCACCATTTAC...CCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCAGGCTCTCAAACCTCTaGTTTAACAACTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRLRSPGCGVGQRKEIRVRLSNL*FNNCFC
Trigger: GCAGAAGCAGTTGTTAAACCAGAGGTTTGAGAGCCT...GACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTTCAGCCAGGTGCATGTaGACCCCAAGGGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: AGLGSERRYGSGTLEFFISARCM*TPRVPK
Trigger: TTTGGGGACCCTTGGGGTCCACATGCACCTGGCTGA...AATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp TGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCGCAGTCACAGCAGCGTaGGAACCCGTGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: WAAKGDTGLGRSSSLLRSAVTAA*EPVGRW
Trigger: CCACCTTCCCACGGGTTCCCACGCTGCTGTGACTGC...GGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCCTCCTCCATCTGTGTaGTCACTGCTTGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: ERRYGSGTLEFFIEILPGPPPSV*SLLARG
Trigger: ACCGCGTGCAAGCAGTGATCACACAGATGGAGGAGG...CCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCAGGACAACCTCATaGCTGCACGATGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GWAAKGDTGLGRSSSLLRSRTTS*LHDGQR
Trigger: CCGCTGCCCATCGTGCAGGCATGAGGTTGTCCTGGA...TCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp TTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGAGTAAGTTGTGTTTGTaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FIEILPGPAPIWVMLRSLSKLCL*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCACAAACACAACTTACT...CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296098.4
CDS-3UTR GCA 90 bp GGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCCGGCTGGCATCACAGAGGTaGCCAATAGGGGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: GDTGLGRSSSLLRSSRGRLASQR*PIGVHL
Trigger: CAAATGAACCCCTATTGGGCACCTCTGTGATGCCAG...CCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTCCTGGAAGACGTCGTTaGCACATTTGCGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: AGLGSERRYGSGTLEFFIPGRRR*HICGTG
Trigger: ACCTGTGCCGCAAATGTGCCAACGACGTCTTCCAGG...AATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp AGTACTGAAGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGCGTTTGTAAATGGTaGGCAGTGGGGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: STEDPLAFVVEAGQSQQRGVCKW*AVGPPH
Trigger: GTGAGGTGGCCCCACTGCCCACCATTTACAAACGCC...ACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCTTCAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCCGGTTTGTGGCTCTTCCATaGACTGGATGGCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GDTGLGRSSSLLRSSRGRFVALP*TGWQTP
Trigger: TGGAGTCTGCCATCCAGTCCATGGAAGAGCCACAAA...CCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGTCACCAGTTCGCTCCTaGCATCACAGAGGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: RGWAAKGDTGLGRSSSLLSPVRS*HHRGAQ
Trigger: TTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGA...CAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGACCTCCTCCATCTGTGTaGTCACTGCTTGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: GWAAKGDTGLGRSSSLLRPPPSV*SLLARG
Trigger: ACCGCGTGCAAGCAGTGATCACACAGATGGAGGAGG...TCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp TGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCGCGATGCCATCGCTaGGCTCACTCTTCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: WAAKGDTGLGRSSSLLRSSRCHR*AHSSGV
Trigger: AACGCCAGAAGAGTGAGCTCAGCGATGGCATCGCGA...GGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380075.7
CDS-3UTR GCA 90 bp TTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCTCTGGTTTAACAACTaGTTCTGCCTCCGGCTATTG +
Preference number: 4 (lower is better)
Translates to: FIEILPGPAPIWVMLRSLLWFNN*FCLRLL
Trigger: CAATAGCCGGAGGCAGAAGCAGTTGTTAAACCAGAG...CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp CGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGCATTTCGGCCACGTaGTCCACCCTTACGGTGAAT +
Preference number: 4 (lower is better)
Translates to: RGWAAKGDTGLGRSSSLLSISAT*STLTVN
Trigger: ATTCACCGTAAGGGTGGAGCACGTGGCCGAAATGCT...CAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGTGGAGTGCAGCGGCCTaGATGACTCCTGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: RGWAAKGDTGLGRSSSLLWSAAA*MTPACK
Trigger: TTTACAAGCAGGAGTCATCCAGGCCGCTGCACTCCA...CAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGTCTGGCGTTTGTAAATaGTGGGCAGTGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: ERRYGSGTLEFFIEILPGSGVCK*WAVGPP
Trigger: AGGTGGCCCCACTGCCCACCATTTACAAACGCCAGA...CCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCATACAGCGCCATTTGTaGCTCTTCCATGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPIQRHL*LFHGLD
Trigger: ATCCAGTCCATGGAAGAGCCACAAATGGCGCTGTAT...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp TGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCGTGCAGCGGCCTGGATaGCTCCTGCTTGTAAATGTC +
Preference number: 4 (lower is better)
Translates to: WAAKGDTGLGRSSSLLRSVQRPG*LLLVNV
Trigger: GACATTTACAAGCAGGAGTCATCCAGGCCGCTGCAC...GGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTCTGGCATCACAGAGGTaGCCAATAGGGGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: AGLGSERRYGSGTLEFFILASQR*PIGVHL
Trigger: CAAATGAACCCCTATTGGGCACCTCTGTGATGCCAG...AATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGAGCTCCTTGGCCTGCTaGAGATACAGCGCCATTTGT +
Preference number: 4 (lower is better)
Translates to: ERRYGSGTLEFFIEILPGSSLAC*RYSAIC
Trigger: ACAAATGGCGCTGTATCTCCAGCAGGCCAAGGAGCT...CCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp GCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGTCAGGCAGTAAATATTaGTCTTCTCTTCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: ADLGDAAVSAQILPDSSASGSKY*SSLLHA
Trigger: AGCATGAAGAAGAGAAGATCAATATTTACTGCCTGA...CGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCTCCAGGTTGTCCATaGTGTGTGCATCCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: GWAAKGDTGLGRSSSLLRSPGCP*CVHPLA
Trigger: TGCTAGGGGATGCACACAGCATGGACAACCTGGAGA...TCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp GGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCCGGATAATCTTAGTGTTCTaGGAGGCTAAGATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GDTGLGRSSSLLRSSRGRIILVF*EAKMGG
Trigger: TCCTCCCATCTTAGCCTCGCAGAACACTAAGATTAT...CCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296098.4
CDS-3UTR CCA 90 bp GGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATGGAGTGCAGCGGCCTaGATGACTCCTGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: GWAAKGDTGLGRSSSLLRWSAAA*MTPACK
Trigger: TTTACAAGCAGGAGTCATCCAGGCCGCTGCACTCCA...TCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp ACTGAAGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAGGCTCTCAAACCTCTaGTTTAACAACTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TEDPLAFVVEAGQSQQRGRLSNL*FNNCFC
Trigger: GCAGAAGCAGTTGTTAAACCAGAGGTTTGAGAGCCT...CCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp GCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTATACAGCGCCATTTGTaGCTCTTCCATGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: AGLGSERRYGSGTLEFFIIQRHL*LFHGLD
Trigger: ATCCAGTCCATGGAAGAGCCACAAATGGCGCTGTAT...AATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp TGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCAGCTCCTTGGCCTGCTaGAGATACAGCGCCATTTGT +
Preference number: 4 (lower is better)
Translates to: WAAKGDTGLGRSSSLLRSSSLAC*RYSAIC
Trigger: ACAAATGGCGCTGTATCTCCAGCAGGCCAAGGAGCT...GGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp CGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAAGGAGATACGGGTCTaGGACGCTCGAGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: RGWAAKGDTGLGRSSSLLKEIRV*DARVLY
Trigger: ATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTT...CAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR TCA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCTCAGGCAGTAAATATTaGTCTTCTCTTCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPSGSKY*SSLLHA
Trigger: AGCATGAAGAAGAGAAGATCAATATTTACTGCCTGA...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR GCA 90 bp TGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCCTCTGGTTTAACAACTaGTTCTGCCTCCGGCTATTG +
Preference number: 4 (lower is better)
Translates to: WAAKGDTGLGRSSSLLRSLWFNN*FCLRLL
Trigger: CAATAGCCGGAGGCAGAAGCAGTTGTTAAACCAGAG...GGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CCA 90 bp TGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCCTGGATTCCCTTCTGTaGCTCACTCTTGAAATAGCT +
Preference number: 4 (lower is better)
Translates to: WAAKGDTGLGRSSSLLRSLDSLL*LTLEIA
Trigger: AGCTATTTCAAGAGTGAGCCACAGAAGGGAATCCAG...GGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCTGCAGCAGCTCACCCTaGCGCTCCTCCAGCACTGCG +
Preference number: 5 (lower is better)
Translates to: PPGAGADLGDAAVSAQILCSSSP*RSSSTA
Trigger: CGCAGTGCTGGAGGAGCGCAAGGGTGAGCTGCTGCA...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp CGGGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGGGGGCCGGCGCCGATTaGGGTGATGCTGCGGTCTCT +
Preference number: 5 (lower is better)
Translates to: RVAFEAQAAGLGSERRYGGAGAD*GDAAVS
Trigger: AGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCC...CCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACCCG
69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCGCCCAGGCTGCGGGGTaGGGCAGCGAAAGGAGATAC +
Preference number: 5 (lower is better)
Translates to: PPGAGADLGDAAVSAQILAQAAG*GSERRY
Trigger: GTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGC...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GGTCGCCTTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCGGGGCCGGCGCCGATTaGGGTGATGCTGCGGTCTCT +
Preference number: 5 (lower is better)
Translates to: GRLRSPGCGVGQRKEIRVGAGAD*GDAAVS
Trigger: AGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCC...GACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAAGGCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp AGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGGTCGGCGCAGGCCGCTCGAGTTCTTTATaGAGATCCTCCCGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: RSSPTLARALEQGRVGAGRSSSL*RSSRGR
Trigger: CCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCG...GCCTGCGCCGACCCGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTGCCCAGGCTGCGGGGTaGGGCAGCGAAAGGAGATAC +
Preference number: 5 (lower is better)
Translates to: GPAPIWVMLRSLRRSSPTAQAAG*GSERRY
Trigger: GTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGC...AGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGGCCACCTCACAGTCCTaGTGGGCACCGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: AVSAQILPDSSAGSRAGSATSQS*WAPKTL
Trigger: CAAGGTCTTCGGTGCCCACAAGGACTGTGAGGTGGC...CGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCGCTCGAGTTCTTTATaGAGATCCTCCCGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: PPGAGADLGDAAVSAQILRSSSL*RSSRGR
Trigger: CCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCG...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp CCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCATTTGCGGCACAGGTaGTGTTGGCAGGGCAGGATC +
Preference number: 5 (lower is better)
Translates to: PPGAGADLGDAAVSAQILHLRHR*CWQGRI
Trigger: GATCCTGCCCTGCCAACACAACCTGTGCCGCAAATG...GAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGTGCAGCAGCTCACCCTaGCGCTCCTCCAGCACTGCG +
Preference number: 5 (lower is better)
Translates to: ADLGDAAVSAQILPDSSACSSSP*RSSSTA
Trigger: CGCAGTGCTGGAGGAGCGCAAGGGTGAGCTGCTGCA...CGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS TCA 90 bp GCAGACTCCACCAGCTTAGAGGAGGCCTCCAGGTGGTCGCCATACTaGCGGATGAGGCCGCGGACGCGCTGCAGCTTCTCCTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: ADSTSLEEASRWSPY*RMRPRTRCSFSSCS
Trigger: GGAGCAAGAGGAGAAGCTGCAGCGCGTCCGCGGCCTCATCCGTCAGTATGGCGACCACCTGGAGGCCTCCTCTAAGCTGGTGGAGTCTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000485306.1
ENST00000488321.1
CDS-3UTR CAA 90 bp GATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGCCACCTCACAGTCCTaGTGGGCACCGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: DAAVSAQILPDSSAGSRAATSQS*WAPKTL
Trigger: CAAGGTCTTCGGTGCCCACAAGGACTGTGAGGTGGC...TGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGAGATGGGAGGATCACTaGAGCTCGGGAGATCAAGGC +
Preference number: 5 (lower is better)
Translates to: AVSAQILPDSSAGSRAGSRWEDH*SSGDQG
Trigger: GCCTTGATCTCCCGAGCTCAAGTGATCCTCCCATCT...CGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296098.4
CDS-3UTR CAA 90 bp GCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGTTCTGCCTCCGGCTATaGTCCTCGATAGTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: AVSAQILPDSSAGSRAGSFCLRL*SSIVWH
Trigger: GTGCCAGACTATCGAGGACAATAGCCGGAGGCAGAA...CGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGAATGGCCCCGACCTTATaGATCAGCTCCTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: EILPGPAPIWVMLRSLRRMAPTL*ISSLAC
Trigger: GCAGGCCAAGGAGCTGATCAATAAGGTCGGGGCCAT...TCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp CAGGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGGCCTGGAAGACGTCGTaGGCACATTTGCGGCACAGG +
Preference number: 5 (lower is better)
Translates to: QGAGLTSSLLASQRCPIGAWKTS*AHLRHR
Trigger: CCTGTGCCGCAAATGTGCCAACGACGTCTTCCAGGC...CCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGGGTCGCACCCTTACGGTGAATaGCTCCATGCTCTCATAGCC +
Preference number: 5 (lower is better)
Translates to: AVSAQILPDSSAGSRAGSHPYGE*LHALIA
Trigger: GGCTATGAGAGCATGGAGCAATTCACCGTAAGGGTG...CGACCCTGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS TCA 90 bp AGTCGATGGTCCGCAGCATTTCGGCCACGTGCTCCACCCTTACGGTaGATTGCTCCATGCTCTCATAGCCTGGCTCCGGCCGCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: SRWSAAFRPRAPPLR*IAPCSHSLAPAALP
Trigger: TGGCAGGGCGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCACCGTAAGGGTGGAGCACGTGGCCGAAATGCTGCGGACCATCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCCGGAGGTGCTGCTCAGCCTaGGAGTGCAGCGGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: GDTGLGRSSSLLRSSRGRRCCSA*ECSGLD
Trigger: ATCCAGGCCGCTGCACTCCAAGGCTGAGCAGCACCT...CCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp CAGGGCGCTGGGCTCACCAGTTCGCTCCTGGCATCACAGAGGTGCCCAATAGGGATGGCCCCGACCTTATaGATCAGCTCCTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: QGAGLTSSLLASQRCPIGMAPTL*ISSLAC
Trigger: GCAGGCCAAGGAGCTGATCAATAAGGTCGGGGCCAT...CCCTATTGGGCACCTCTGTGATGCCAGGAGCGAACTGGTGAGCCCAGCGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGTCCCCTAGCAGCGGCTaGAAACCCACTGTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: ADLGDAAVSAQILPDSSASPSSG*KPTVKF
Trigger: GAACTTCACAGTGGGTTTCAAGCCGCTGCTAGGGGA...CGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCGCCTGGAAGACGTCGTaGGCACATTTGCGGCACAGG +
Preference number: 5 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPAWKTS*AHLRHR
Trigger: CCTGTGCCGCAAATGTGCCAACGACGTCTTCCAGGC...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp TTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCGTGGGAAAGGTGCTGCTCAGCCTaGGAGTGCAGCGGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: LAFVVEAGQSQQRGNPWERCCSA*ECSGLD
Trigger: ATCCAGGCCGCTGCACTCCAAGGCTGAGCAGCACCT...TTCCCACGGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCAGAGATACAGCGCCATTaGTGGCTCTTCCATGGACTG +
Preference number: 5 (lower is better)
Translates to: DAAVSAQILPDSSAGSRAEIQRH*WLFHGL
Trigger: CAGTCCATGGAAGAGCCACAAATGGCGCTGTATCTC...TGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTTTATTGATCAGCTCCTaGGCCTGCTGGAGATACAGC +
Preference number: 5 (lower is better)
Translates to: GPAPIWVMLRSLRRSSPTLLISS*ACWRYS
Trigger: GCTGTATCTCCAGCAGGCCAAGGAGCTGATCAATAA...AGTCGGGGAGGATCTGCGCAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS GCA 90 bp TACGGTGAATTGCTCCATGCTCTCATAGCCTGGCTCCGGCCGCCCTaGCAGCTCCACCTTCGACATGGCCCCGACCTTATTGATCAGCTC +
Preference number: 5 (lower is better)
Translates to: YGELLHALIAWLRPP*QLHLRHGPDLIDQL
Trigger: GAGCTGATCAATAAGGTCGGGGCCATGTCGAAGGTGGAGCTGGCAGGGCGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCACCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GATGCTGCGGTCTCTGCGCAGATCCTCCCCGACTCTAGCGCGGGCTCTCGAGCACAAGGCTGCAGTAAGTaGTGTTTGTGCCACTGCACT +
Preference number: 5 (lower is better)
Translates to: DAAVSAQILPDSSAGSRAQGCSK*CLCHCT
Trigger: AGTGCAGTGGCACAAACACAACTTACTGCAGCCTTG...TGCTCGAGAGCCCGCGCTAGAGTCGGGGAGGATCTGCGCAGAGACCGCAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296098.4
CDS-3UTR CAA 90 bp TTCGAAGCCCAGGCTGCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGGAGATACAGCGCCATTaGTGGCTCTTCCATGGACTG +
Preference number: 5 (lower is better)
Translates to: FEAQAAGLGSERRYGSGTEIQRH*WLFHGL
Trigger: CAGTCCATGGAAGAGCCACAAATGGCGCTGTATCTC...CGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGCAGCCTGGGCTTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS CCA 90 bp GCCATCGCTGAGCTCACTCTTCTGGCGTTTGTAAATGGTGGGCAGTaGGGCCACCTCACAGTCCTTGTGGGCACCGAAGACCTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: AIAELTLLAFVNGGQ*GHLTVLVGTEDLAE
Trigger: CTCTGCAAGGTCTTCGGTGCCCACAAGGACTGTGAGGTGGCCCCACTGCCCACCATTTACAAACGCCAGAAGAGTGAGCTCAGCGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380075.7
CDS-3UTR CAA 90 bp TTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCGTGGGAACTGTGTGATCACTGCTaGCACGCGGTCATTGCCTGC +
Preference number: 5 (lower is better)
Translates to: LAFVVEAGQSQQRGNPWELCDHC*HAVIAC
Trigger: GCAGGCAATGACCGCGTGCAAGCAGTGATCACACAG...TTCCCACGGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp AGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCTTCTGCCTCCGGCTATaGTCCTCGATAGTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RPVGFCRRGRAVTAAWEPFCLRL*SSIVWH
Trigger: GTGCCAGACTATCGAGGACAATAGCCGGAGGCAGAA...GGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp TTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTGGGAACCCGTGGGAATCCCCTAGCAGCGGCTaGAAACCCACTGTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LAFVVEAGQSQQRGNPWESPSSG*KPTVKF
Trigger: GAACTTCACAGTGGGTTTCAAGCCGCTGCTAGGGGA...TTCCCACGGGTTCCCACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp TTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGTCTCTGTGCAGTAAGTTGTGTTaGTGCCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: FIEILPGPAPIWVMLRSLCSKLC*CHCTPA
Trigger: GGCTGGAGTGCAGTGGCACAAACACAACTTACTGCA...CAGAGACCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296098.4
CDS-3UTR CAA 90 bp GCTTTCAGCCAGGTCAGCCAGGTGCATGTGGACCCCAAGGGTCCCCAAATCCCCTTATTGATCAGCTCCTaGGCCTGCTGGAGATACAGC +
Preference number: 5 (lower is better)
Translates to: AFSQVSQVHVDPKGPQIPLLISS*ACWRYS
Trigger: GCTGTATCTCCAGCAGGCCAAGGAGCTGATCAATAA...GGGGATTTGGGGACCCTTGGGGTCCACATGCACCTGGCTGACCTGGCTGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCCGGCACCCTTACGGTGAATaGCTCCATGCTCTCATAGCC +
Preference number: 5 (lower is better)
Translates to: GDTGLGRSSSLLRSSRGRHPYGE*LHALIA
Trigger: GGCTATGAGAGCATGGAGCAATTCACCGTAAGGGTG...CCGGCCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GCGGGGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTAGCTGCTTCTCCAGGTaGTCCATGCTGTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: AGLGSERRYGSGTLEFFISCFSR*SMLCAS
Trigger: GGATGCACACAGCATGGACAACCTGGAGAAGCAGCT...AATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGATCCTCCCGGGGCTGTGTGATCACTGCTaGCACGCGGTCATTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ERRYGSGTLEFFIEILPGLCDHC*HAVIAC
Trigger: GCAGGCAATGACCGCGTGCAAGCAGTGATCACACAG...CCCCGGGAGGATCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS-3UTR CAA 90 bp GAGTTCTTTATTGAGATCCTCCCGGGGCCGGCGCCGATTTGGGTGATGCTGCGGAGTACTGAAGACCCGTaGGCTTTTGTCGTAGAGGCA +
Preference number: 5 (lower is better)
Translates to: EFFIEILPGPAPIWVMLRSTEDP*AFVVEA
Trigger: TGCCTCTACGACAAAAGCCAACGGGTCTTCAGTACT...CCGCAGCATCACCCAAATCGGCGCCGGCCCCGGGAGGATCTCAATAAAGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS GCA 90 bp TCCTCCAGCACTGCGCACAGGCTCTCAAACCTCTGGTTTAACAACTaGTTCTGCCTCCGGCTATTGTCCTCGATAGTCTGGCACACCTCC +
Preference number: 5 (lower is better)
Translates to: SSSTAHRLSNLWFNN*FCLRLLSSIVWHTS
Trigger: GGAGGTGTGCCAGACTATCGAGGACAATAGCCGGAGGCAGAAGCAGTTGTTAAACCAGAGGTTTGAGAGCCTGTGCGCAGTGCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000488321.1
CDS GCA 90 bp TCCACCTTCGACATGGCCCCGACCTTATTGATCAGCTCCTTGGCCTaGTGGAGATACAGCGCCATTTGTGGCTCTTCCATGGACTGGATG +
Preference number: 5 (lower is better)
Translates to: STFDMAPTLLISSLA*WRYSAICGSSMDWM
Trigger: CATCCAGTCCATGGAAGAGCCACAAATGGCGCTGTATCTCCAGCAGGCCAAGGAGCTGATCAATAAGGTCGGGGCCATGTCGAAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000485306.1
CDS CCA 90 bp CAGAGTGAGATCCTGTTTCTTCTGGCGTTTGTAAATGGTGGGCAGTaGGGCCACCTCACAGTCCTTGTGGGCACCGAAGACCTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: QSEILFLLAFVNGGQ*GHLTVLVGTEDLAE
Trigger: CTCTGCAAGGTCTTCGGTGCCCACAAGGACTGTGAGGTGGCCCCACTGCCCACCATTTACAAACGCCAGAAGAAACAGGATCTCACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296098.4
CDS CCA 90 bp TCACCCTTGCGCTCCTCCAGCACTGCGCACAGGCTCTCAAACCTCTaGTTTAACAACTGCTTCTGCCTCCGGCTATTGTCCTCGATAGTC +
Preference number: 5 (lower is better)
Translates to: SPLRSSSTAHRLSNL*FNNCFCLRLLSSIV
Trigger: GACTATCGAGGACAATAGCCGGAGGCAGAAGCAGTTGTTAAACCAGAGGTTTGAGAGCCTGTGCGCAGTGCTGGAGGAGCGCAAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000488321.1
CDS-3UTR CAA 90 bp AGTACTGAAGACCCGTTGGCTTTTGTCGTAGAGGCAGGGCAGTCACAGCAGCGTAGCTGCTTCTCCAGGTaGTCCATGCTGTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: STEDPLAFVVEAGQSQQRSCFSR*SMLCAS
Trigger: GGATGCACACAGCATGGACAACCTGGAGAAGCAGCT...ACGCTGCTGTGACTGCCCTGCCTCTACGACAAAAGCCAACGGGTCTTCAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS CCA 90 bp GCTCCTGGCCTTCACTCACTGCCTGTAGACCCTTCCTCGCTTAGATaGCCTCTGGATTCCCTTCTGTGGCTCACTCTTGAAATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: APGLHSLPVDPSSLR*PLDSLLWLTLEIAL
Trigger: CAGAGCTATTTCAAGAGTGAGCCACAGAAGGGAATCCAGAGGCCATCTAAGCGAGGAAGGGTCTACAGGCAGTGAGTGAAGGCCAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS GCA 90 bp ACTTGTCTCGTCCCAGATAGCAGTCTTCGGACAGTCTCTACTTTCTaGTCTGCACCCTCGCCAGGCTCACGTAGTTTTAGCTATCCCTCT +
Preference number: 5 (lower is better)
Translates to: TCLVPDSSLRTVSTF*SAPSPGSRSFSYPS
Trigger: AGAGGGATAGCTAAAACTACGTGAGCCTGGCGAGGGTGCAGAGCAGAAAGTAGAGACTGTCCGAAGACTGCTATCTGGGACGAGACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS CCA 90 bp CTAGTGATTCTGGAAGGAGGTGGAGAGAAGCCCTCCACCACTAAGTaGGGAAGGAACAGACAGTCTCCAAACATCCACCAGATACCAGAC +
Preference number: 5 (lower is better)
Translates to: LVILEGGGEKPSTTK*GRNRQSPNIHQIPD
Trigger: GTCTGGTATCTGGTGGATGTTTGGAGACTGTCTGTTCCTTCCCCACTTAGTGGTGGAGGGCTTCTCTCCACCTCCTTCCAGAATCACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488321.1
CDS-3UTR CAA 90 bp GGTTGGGCAGCGAAAGGAGATACGGGTCTGGGACGCTCGAGTTCTTTATTGAGAAGTACTGAAGACCCGTaGGCTTTTGTCGTAGAGGCA +
Preference number: 5 (lower is better)
Translates to: GWAAKGDTGLGRSSSLLRSTEDP*AFVVEA
Trigger: TGCCTCTACGACAAAAGCCAACGGGTCTTCAGTACT...TCTCAATAAAGAACTCGAGCGTCCCAGACCCGTATCTCCTTTCGCTGCCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS GCA 72 bp CGGATGAGGCCGCGGACGCGCTGCAGCTTCTCCTCTTaGTCCCGGGCCAGCGCCTGCAGCAGCTCACCCTTG +
Preference number: 6 (lower is better)
Translates to: RMRPRTRCSFSS*SRASACSSSPL
Trigger: CAAGGGTGAGCTGCTGCAGGCGCTGGCCCGGGAGCAAGAGGAGAAGCTGCAGCGCGTCCGCGGCCTCATCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000485306.1
ENST00000488321.1
CDS CAA 72 bp TCTTGCTCCCGGGCCAGCGCCTGCAGCAGCTCACCCTaGCGCTCCTCCAGCACTGCGCACAGGCTCTCAAAC +
Preference number: 6 (lower is better)
Translates to: SCSRASACSSSP*RSSSTAHRLSN
Trigger: GTTTGAGAGCCTGTGCGCAGTGCTGGAGGAGCGCAAGGGTGAGCTGCTGCAGGCGCTGGCCCGGGAGCAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000485306.1
ENST00000488321.1
CDS TCA 72 bp ACCAGCTTAGAGGAGGCCTCCAGGTGGTCGCCATACTaGCGGATGAGGCCGCGGACGCGCTGCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: TSLEEASRWSPY*RMRPRTRCSFS
Trigger: GGAGAAGCTGCAGCGCGTCCGCGGCCTCATCCGTCAGTATGGCGACCACCTGGAGGCCTCCTCTAAGCTGGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000485306.1
ENST00000488321.1
CDS CCA 72 bp CCTCTTCCTCCCCGGAAGCGCCTGGCTGGAAGTCGATaGTCCGCAGCATTTCGGCCACGTGCTCCACCCTTA +
Preference number: 6 (lower is better)
Translates to: PLPPRKRLAGSR*SAAFRPRAPPL
Trigger: TAAGGGTGGAGCACGTGGCCGAAATGCTGCGGACCATCGACTTCCAGCCAGGCGCTTCCGGGGAGGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS CAA 90 bp GATGGTCCGCAGCATTTCGGCCACGTGCTCCACCCTTACGGTGAATaGCTCCATGCTCTCATAGCCTGGCTCCGGCCGCCCTGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: DGPQHFGHVLHPYGE*LHALIAWLRPPCQL
Trigger: GAGCTGGCAGGGCGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCACCGTAAGGGTGGAGCACGTGGCCGAAATGCTGCGGACCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS GCA 72 bp CGGCCTCCTGAAGACACAGTGGTGGAGCCCCGGGACTaGCATAGAGGATTCGAGGCCTGGAAGACGTCGTTG +
Preference number: 6 (lower is better)
Translates to: RPPEDTVVEPRD*HRGFEAWKTSL
Trigger: CAACGACGTCTTCCAGGCCTCGAATCCTCTATGGCAGTCCCGGGGCTCCACCACTGTGTCTTCAGGAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS CCA 72 bp ACGATGGGCAGCGGAAACGGCCTCCTGAAGACACAGTaGTGGAGCCCCGGGACTGCCATAGAGGATTCGAGG +
Preference number: 6 (lower is better)
Translates to: TMGSGNGLLKTQ*WSPGTAIEDSR
Trigger: CCTCGAATCCTCTATGGCAGTCCCGGGGCTCCACCACTGTGTCTTCAGGAGGCCGTTTCCGCTGCCCATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS TCA 72 bp TCCGCAGCATTTCGGCCACGTGCTCCACCCTTACGGTaGATTGCTCCATGCTCTCATAGCCTGGCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: SAAFRPRAPPLR*IAPCSHSLAPA
Trigger: GGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCACCGTAAGGGTGGAGCACGTGGCCGAAATGCTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS CAA 90 bp TGCTTCTCCAGGTTGTCCATGCTGTGTGCATCCCCTAGCAGCGGCTaGAAACCCACTGTGAAGTTCATCCCCTCGGTGGTCGTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: CFSRLSMLCASPSSG*KPTVKFIPSVVVPG
Trigger: GCCAGGCACGACCACCGAGGGGATGAACTTCACAGTGGGTTTCAAGCCGCTGCTAGGGGATGCACACAGCATGGACAACCTGGAGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS CCA 72 bp GAGCTCACTCTTCTGGCGTTTGTAAATGGTGGGCAGTaGGGCCACCTCACAGTCCTTGTGGGCACCGAAGAC +
Preference number: 6 (lower is better)
Translates to: ELTLLAFVNGGQ*GHLTVLVGTED
Trigger: GTCTTCGGTGCCCACAAGGACTGTGAGGTGGCCCCACTGCCCACCATTTACAAACGCCAGAAGAGTGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380075.7
CDS CAA 90 bp GGATTCGAGGCCTGGAAGACGTCGTTGGCACATTTGCGGCACAGGTaGTGTTGGCAGGGCAGGATCACCACTGGTTTGGAGAACATCTCC +
Preference number: 6 (lower is better)
Translates to: GFEAWKTSLAHLRHR*CWQGRITTGLENIS
Trigger: GGAGATGTTCTCCAAACCAGTGGTGATCCTGCCCTGCCAACACAACCTGTGCCGCAAATGTGCCAACGACGTCTTCCAGGCCTCGAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS TCA 72 bp GGTCATTGCCTGCCACCAGCATCGCGATGCCATCGCTaGGCTCACTCTGATACACACACAGGTCAGCACTCA +
Preference number: 6 (lower is better)
Translates to: GHCLPPASRCHR*AHSDTHTGQHS
Trigger: TGAGTGCTGACCTGTGTGTGTATCAGAGTGAGCTCAGCGATGGCATCGCGATGCTGGTGGCAGGCAATGACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488321.1
CDS GCA 72 bp ATCTTCTCTTCTTCATGCTCCTCGCACATGAGGTGCTaGTCAGCCTTGGAGTGCAGCGGCCTGGATGACTCC +
Preference number: 6 (lower is better)
Translates to: IFSSSCSSHMRC*SALECSGLDDS
Trigger: GGAGTCATCCAGGCCGCTGCACTCCAAGGCTGAGCAGCACCTCATGTGCGAGGAGCATGAAGAAGAGAAGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS CCA 72 bp CGCTCCTCCAGCACTGCGCACAGGCTCTCAAACCTCTaGTTTAACAACTGCTTCTGCCTCCGGCTATTGTCC +
Preference number: 6 (lower is better)
Translates to: RSSSTAHRLSNL*FNNCFCLRLLS
Trigger: GGACAATAGCCGGAGGCAGAAGCAGTTGTTAAACCAGAGGTTTGAGAGCCTGTGCGCAGTGCTGGAGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000485306.1
ENST00000488321.1
CDS CAA 72 bp AGGTTGTCCATGCTGTGTGCATCCCCTAGCAGCGGCTaGAAACCCACTGTGAAGTTCATCCCCTCGGTGGTC +
Preference number: 6 (lower is better)
Translates to: RLSMLCASPSSG*KPTVKFIPSVV
Trigger: GACCACCGAGGGGATGAACTTCACAGTGGGTTTCAAGCCGCTGCTAGGGGATGCACACAGCATGGACAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS GCA 72 bp GACATGGCCCCGACCTTATTGATCAGCTCCTTGGCCTaGTGGAGATACAGCGCCATTTGTGGCTCTTCCATG +
Preference number: 6 (lower is better)
Translates to: DMAPTLLISSLA*WRYSAICGSSM
Trigger: CATGGAAGAGCCACAAATGGCGCTGTATCTCCAGCAGGCCAAGGAGCTGATCAATAAGGTCGGGGCCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000485306.1
CDS CCA 72 bp ATCCTGTTTCTTCTGGCGTTTGTAAATGGTGGGCAGTaGGGCCACCTCACAGTCCTTGTGGGCACCGAAGAC +
Preference number: 6 (lower is better)
Translates to: ILFLLAFVNGGQ*GHLTVLVGTED
Trigger: GTCTTCGGTGCCCACAAGGACTGTGAGGTGGCCCCACTGCCCACCATTTACAAACGCCAGAAGAAACAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296098.4
CDS GCA 72 bp GTCCCAGATAGCAGTCTTCGGACAGTCTCTACTTTCTaGTCTGCACCCTCGCCAGGCTCACGTAGTTTTAGC +
Preference number: 6 (lower is better)
Translates to: VPDSSLRTVSTF*SAPSPGSRSFS
Trigger: GCTAAAACTACGTGAGCCTGGCGAGGGTGCAGAGCAGAAAGTAGAGACTGTCCGAAGACTGCTATCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS GCA 72 bp CACAGGCTCTCAAACCTCTGGTTTAACAACTGCTTCTaGCTCCGGCTATTGTCCTCGATAGTCTGGCACACC +
Preference number: 6 (lower is better)
Translates to: HRLSNLWFNNCF*LRLLSSIVWHT
Trigger: GGTGTGCCAGACTATCGAGGACAATAGCCGGAGGCAGAAGCAGTTGTTAAACCAGAGGTTTGAGAGCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000488321.1
CDS GCA 72 bp ACTGCGCACAGGCTCTCAAACCTCTGGTTTAACAACTaGTTCTGCCTCCGGCTATTGTCCTCGATAGTCTGG +
Preference number: 6 (lower is better)
Translates to: TAHRLSNLWFNN*FCLRLLSSIVW
Trigger: CCAGACTATCGAGGACAATAGCCGGAGGCAGAAGCAGTTGTTAAACCAGAGGTTTGAGAGCCTGTGCGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296098.4
ENST00000380075.7
ENST00000488321.1
CDS CCA 72 bp CTTCACTCACTGCCTGTAGACCCTTCCTCGCTTAGATaGCCTCTGGATTCCCTTCTGTGGCTCACTCTTGAA +
Preference number: 6 (lower is better)
Translates to: LHSLPVDPSSLR*PLDSLLWLTLE
Trigger: TTCAAGAGTGAGCCACAGAAGGGAATCCAGAGGCCATCTAAGCGAGGAAGGGTCTACAGGCAGTGAGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296098.4
ENST00000380075.7
CDS GCA 72 bp CCATCGCTGAGCTCACTATCTATAATCTTAGTGTTCTaGGAGGCTAAGATGGGAGGATCACTTGAGCTCGGG +
Preference number: 6 (lower is better)
Translates to: PSLSSLSIILVF*EAKMGGSLELG
Trigger: CCCGAGCTCAAGTGATCCTCCCATCTTAGCCTCGCAGAACACTAAGATTATAGATAGTGAGCTCAGCGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296098.4
CDS CCA 72 bp AAGTTAAATAACTGGATTAAAGTTTTGCGGCAAAGCTaGAATGCACACCCAGCAGCCTGGCAAAAGCACCTC +
Preference number: 6 (lower is better)
Translates to: KLNNWIKVLRQS*NAHPAAWQKHL
Trigger: GAGGTGCTTTTGCCAGGCTGCTGGGTGTGCATTCCAGCTTTGCCGCAAAACTTTAATCCAGTTATTTAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485306.1
CDS CAA 72 bp CAAAGCACAGAGAAGTTAAATAACTGGATTAAAGTTTaGCGGCAAAGCTGGAATGCACACCCAGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: QSTEKLNNWIKV*RQSWNAHPAAW
Trigger: CCAGGCTGCTGGGTGTGCATTCCAGCTTTGCCGCAAAACTTTAATCCAGTTATTTAACTTCTCTGTGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485306.1