Pregenerated sensors for TRIM52 (Homo sapiens)
Ensembl gene IDs: ENSG00000183718Ensembl transcript IDs: ENST00000503005.1, ENST00000510796.1, ENST00000513146.1, ENST00000514805.1, ENST00000611618.1, ENST00000612671.1
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGGTCCCTCTTGCAGAGTGATGAATGATTTTATTGGTGGCAGCTaGGTGGCAGGACAATCCAGGCATCCAGTTATGCCTGATCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: SGPSCRVMNDFIGGS*VAGQSRHPVMPDPQ Trigger: TTGGGGATCAGGCATAACTGGATGCCTGGATTGTCCTGCCACCCAGCTGCCACCAATAAAATCATTCATCACTCTGCAAGAGGGACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR GCA 90 bp | ACAGAAAAACAAGGAGTACTGATGATGGAAGCATCTGGTCCCTCTTaGAGAGTGATGAATGATTTTATTGGTGGCAGCTGGGTGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: TEKQGVLMMEASGPS*RVMNDFIGGSWVAG Trigger: TCCTGCCACCCAGCTGCCACCAATAAAATCATTCATCACTCTGCAAGAGGGACCAGATGCTTCCATCATCAGTACTCCTTGTTTTTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR CCA 90 bp | CAGTGGTCTATGCTGACAGCAAGGCTGAAGATTTCCAGTAGGTTATaGGTAATCAGTGAAAGTTCATGCTTGGTGGTGACAGCTGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: QWSMLTARLKISSRL*VISESSCLVVTAAV Trigger: TACTGCAGCTGTCACCACCAAGCATGAACTTTCACTGATTACCCATAACCTACTGGAAATCTTCAGCCTTGCTGTCAGCATAGACCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR CCA 90 bp | TCAAAAAGCAGGGCAAACTGGAATGGAATGTACTGTTTCTCACAGTaGTCTATGCTGACAGCAAGGCTGAAGATTTCCAGTAGGTTATGG | + |
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Preference number: 1 (lower is better) Translates to: SKSRANWNGMYCFSQ*SMLTARLKISSRLW Trigger: CCATAACCTACTGGAAATCTTCAGCCTTGCTGTCAGCATAGACCACTGTGAGAAACAGTACATTCCATTCCAGTTTGCCCTGCTTTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR TCA 90 bp | CCATTAGACTTTGAGTTTCACAAACTCCTCTTGAAGCTCTTCCAGTaGGGCCTGCACATCGGTATGAAACACATTCTTTCCAAAAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: PLDFEFHKLLLKLFQ*GLHIGMKHILSKSY Trigger: GTAGCTTTTGGAAAGAATGTGTTTCATACCGATGTGCAGGCCTCACTGGAAGAGCTTCAAGAGGAGTTTGTGAAACTCAAAGTCTAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR TCA 90 bp | TCTGGAGTATTTGCCTGGAAGTTTCTAATCAAAACCATTAGACTTTaGGTTTCACAAACTCCTCTTGAAGCTCTTCCAGTGAGGCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: SGVFAWKFLIKTIRL*VSQTPLEALPVRPA Trigger: TGCAGGCCTCACTGGAAGAGCTTCAAGAGGAGTTTGTGAAACTCAAAGTCTAATGGTTTTGATTAGAAACTTCCAGGCAAATACTCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR GCA 90 bp | AGGCTGAAGATTTCCAGTAGGTTATGGGTAATCAGTGAAAGTTCATaGTTGGTGGTGACAGCTGCAGTACATCTTGAATACCAGTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: RLKISSRLWVISESS*LVVTAAVHLEYQFS Trigger: AGAAAACTGGTATTCAAGATGTACTGCAGCTGTCACCACCAAGCATGAACTTTCACTGATTACCCATAACCTACTGGAAATCTTCAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR CCA 90 bp | AGAAAACATGGAATGGCATTTAGATCTTCAAAAAGCAGGGCAAACTaGAATGGAATGTACTGTTTCTCACAGTGGTCTATGCTGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: RKHGMAFRSSKSRAN*NGMYCFSQWSMLTA Trigger: TGCTGTCAGCATAGACCACTGTGAGAAACAGTACATTCCATTCCAGTTTGCCCTGCTTTTTGAAGATCTAAATGCCATTCCATGTTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR TCA 90 bp | CCATTAAGATATACTCCTATACAATTTCCTCCAACTCGGTTCATTTaGTACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: PLRYTPIQFPPTRFI*YSCKNTVFGGQVEG Trigger: GCCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAACCGAGTTGGAGGAAATTGTATAGGAGTATATCTTAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR GCA 90 bp | CCAGTTTTCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTaGTGTAGTGCCATTAAGATATACTCCTATACAATTTCCTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: PVFFNLCQKPKFNTV*CSAIKIYSYTISSN Trigger: GTTGGAGGAAATTGTATAGGAGTATATCTTAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGAAAACTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR GCA 90 bp | TTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGTTGCCCAGGCTGGAGTaGAGTGGCTCAGTCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: FQPWGCSVHKFSRIRFSLLPRLE*SGSVSA Trigger: AGCCGAGACTGAGCCACTGCACTCCAGCCTGGGCAA...CAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR TCA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAAGTTCATGCTTGGTGGTaGCAGCTGCAGTACATCTTG | + |
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Preference number: 2 (lower is better) Translates to: VTVKPELFFPGWCERCKKVHAWW*QLQYIL Trigger: CAAGATGTACTGCAGCTGTCACCACCAAGCATGAAC...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR GCA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAATTCATGTCATTCTCCTaGCTCAGCCTCTTGCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: VTVKPELFFPGWCERCKKFMSFS*LSLLRA Trigger: AGCTCGCAAGAGGCTGAGGCAGGAGAATGACATGAA...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR TCA 90 bp | TCAATACTGTCCAGTCTTAAAGCTGCAGAGAATCGGGCTTTGCAGAACACTCCAGCATCCAGTTATGCCTaGTCCCCAATAAGTGAAATC | + |
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Preference number: 2 (lower is better) Translates to: SILSSLKAAENRALQNTPASSYA*SPISEI Trigger: GATTTCACTTATTGGGGATCAGGCATAACTGGATGC...TGGAGTGTTCTGCAAAGCCCGATTCTCTGCAGCTTTAAGACTGGACAGTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CCA 90 bp | GGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGGCAACCAAGAAATGAACACCTCCTGTaGCTACCCAACTTTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: GVVLSTSSAESVFLWQPRNEHLL*LPNFSH Trigger: GTGTGAAAAGTTGGGTAGCCACAGGAGGTGTTCATT...TCTTGGTTGCCAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR GCA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAATTGGCATGGTGTCACTaGCCAACACTTTCAGATAAC | + |
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Preference number: 2 (lower is better) Translates to: VTVKPELFFPGWCERCKKLAWCH*PTLSDN Trigger: GTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTATTGGTGGCAGCTGGGTaGCAGGACAATCCAGGCATC | + |
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Preference number: 2 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLLVAAG*QDNPGI Trigger: GATGCCTGGATTGTCCTGCCACCCAGCTGCCACCAA...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CCA 90 bp | GGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGGCAACCAAGAGAATTTAACAGTGTTTaGCATGGTGTCACTGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: GVVLSTSSAESVFLWQPREFNSV*HGVTAQ Trigger: TTGGGCAGTGACACCATGCCAAACACTGTTAAATTC...TCTTGGTTGCCAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR TCA 90 bp | TTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGGCACACCCACAGTTTTaGAAGCCTTATTCTGAATGT | + |
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Preference number: 2 (lower is better) Translates to: FQPWGCSVHKFSRIRFSLAHPQF*KPYSEC Trigger: ACATTCAGAATAAGGCTTTCAAAACTGTGGGTGTGC...CAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR GCA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAAGCATCTGGTCCCTCTTaGAGAGTGATGAATGATTTT | + |
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Preference number: 2 (lower is better) Translates to: VTVKPELFFPGWCERCKKASGPS*RVMNDF Trigger: AAAATCATTCATCACTCTGCAAGAGGGACCAGATGC...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CCA 90 bp | TCAATACTGTCCAGTCTTAAAGCTGCAGAGAATCGGGCTTTGCAGAACACTCCAATAAGTAAGGCTTTCTaGGCCAAAAAGCCTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SILSSLKAAENRALQNTPISKAF*AKKPLL Trigger: AAGAAGAGGCTTTTTGGCCCAGAAAGCCTTACTTAT...TGGAGTGTTCTGCAAAGCCCGATTCTCTGCAGCTTTAAGACTGGACAGTATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CCA 90 bp | TTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGACGAACTCTAACTCATaGGATGGACAAACTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: FQPWGCSVHKFSRIRFSLTNSNS*DGQTGR Trigger: TCTTCCAGTTTGTCCATCCCATGAGTTAGAGTTCGT...CAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR CAA 90 bp | CTGAAGATTTCCAGTAGGTTATGGGTAATCAGTGAAAGTTCATGCTaGGTGGTGACAGCTGCAGTACATCTTGAATACCAGTTTTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LKISSRLWVISESSC*VVTAAVHLEYQFSS Trigger: TGAAGAAAACTGGTATTCAAGATGTACTGCAGCTGTCACCACCAAGCATGAACTTTCACTGATTACCCATAACCTACTGGAAATCTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTACTGCTTCCTAAAACCTaGCACCATTTAATGGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLLLPKT*HHLMVP Trigger: GGGCACCATTAAATGGTGTCAGGTTTTAGGAAGCAG...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR CAA 90 bp | GCCATTAAGATATACTCCTATACAATTTCCTCCAACTCGGTTCATTaGATACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: AIKIYSYTISSNSVH*IQLQKYCLWWSSRR Trigger: CCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAACCGAGTTGGAGGAAATTGTATAGGAGTATATCTTAATGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR GCA 90 bp | ATACTCCTATACAATTTCCTCCAACTCGGTTCATTTGATACAGCTGCAAAAATATGGCAGCACTCAGAATaGAAGGTTTCACAAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ILLYNFLQLGSFDTAAKIWQHSE*KVSQVS Trigger: AGACACTTGTGAAACCTTGCATTCTGAGTGCTGCCA...TATTTTTGCAGCTGTATCAAATGAACCGAGTTGGAGGAAATTGTATAGGAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CCA 90 bp | GTTCATTTGATACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGGCTCTCCTTAATTTATTTGTaGCAGCACTCAGAATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VHLIQLQKYCLWWSSRRLSLIYL*QHSECK Trigger: CTTGCATTCTGAGTGCTGCCACAAATAAATTAAGGA...GAGCCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTATCTTTGATTCTAGCTTaGAGAGTCAAGACGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLSLILA*RVKTNS Trigger: AGAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGA...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTGCAGAGAATCGGGCTTaGCAGAACACTCCACTGTTT | + |
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Preference number: 3 (lower is better) Translates to: CSSNLGVVLSTSSAESVFAENRA*QNTPLF Trigger: AAACAGTGGAGTGTTCTGCAAAGCCCGATTCTCTGC...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTAGTGAAAGTTCATGCTaGGTGGTGACAGCTGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: CSSNLGVVLSTSSAESVFSESSC*VVTAAV Trigger: TACTGCAGCTGTCACCACCAAGCATGAACTTTCACT...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR TCA 72 bp | TTTGAGTTTCACAAACTCCTCTTGAAGCTCTTCCAGTaGGGCCTGCACATCGGTATGAAACACATTCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: FEFHKLLLKLFQ*GLHIGMKHILS Trigger: GGAAAGAATGTGTTTCATACCGATGTGCAGGCCTCACTGGAAGAGCTTCAAGAGGAGTTTGTGAAACTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR CCA 72 bp | ATGCTGACAGCAAGGCTGAAGATTTCCAGTAGGTTATaGGTAATCAGTGAAAGTTCATGCTTGGTGGTGACA | + |
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Preference number: 3 (lower is better) Translates to: MLTARLKISSRL*VISESSCLVVT Trigger: TGTCACCACCAAGCATGAACTTTCACTGATTACCCATAACCTACTGGAAATCTTCAGCCTTGCTGTCAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CAA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAATTCTTTGATTCTAGCTaGCAGAGTCAAGACGAACTC | + |
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Preference number: 3 (lower is better) Translates to: VTVKPELFFPGWCERCKKFFDSS*QSQDEL Trigger: GAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGAA...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CAA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAAACTCAACTGAAGAAGTaGACCCTATCTTCTGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: VTVKPELFFPGWCERCKKTQLKK*TLSSAK Trigger: TTTTGCAGAAGATAGGGTCAACTTCTTCAGTTGAGT...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CAA 90 bp | TTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGTTAAGCTTTCACGGCTaGGAAGATTCCTGTGAATAT | + |
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Preference number: 3 (lower is better) Translates to: FQPWGCSVHKFSRIRFSLLSFHG*EDSCEY Trigger: ATATTCACAGGAATCTTCCAAGCCGTGAAAGCTTAA...CAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CAA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAATCCAACTCGGTTCATTaGATACAGCTGCAAAAATAC | + |
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Preference number: 3 (lower is better) Translates to: VTVKPELFFPGWCERCKKSNSVH*IQLQKY Trigger: GTATTTTTGCAGCTGTATCAAATGAACCGAGTTGGA...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CAA 90 bp | TTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGCAGCTGCAGTACATCTaGAATACCAGTTTTCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: FQPWGCSVHKFSRIRFSLQLQYI*NTSFLQ Trigger: TTGAAGAAAACTGGTATTCAAGATGTACTGCAGCTG...CAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR GCA 72 bp | ATTTCCAGTAGGTTATGGGTAATCAGTGAAAGTTCATaGTTGGTGGTGACAGCTGCAGTACATCTTGAATAC | + |
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Preference number: 3 (lower is better) Translates to: ISSRLWVISESS*LVVTAAVHLEY Trigger: GTATTCAAGATGTACTGCAGCTGTCACCACCAAGCATGAACTTTCACTGATTACCCATAACCTACTGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR TCA 72 bp | AGTAGAAGGCTCACGAAAACAGCACACCCACAGTTTTaGAAGCCTTATTCTGAATGTAAGCAAAGTACAGTT | + |
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Preference number: 3 (lower is better) Translates to: SRRLTKTAHPQF*KPYSECKQSTV Trigger: AACTGTACTTTGCTTACATTCAGAATAAGGCTTTCAAAACTGTGGGTGTGCTGTTTTCGTGAGCCTTCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR TCA 72 bp | TTTGCCTGGAAGTTTCTAATCAAAACCATTAGACTTTaGGTTTCACAAACTCCTCTTGAAGCTCTTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: FAWKFLIKTIRL*VSQTPLEALPV Trigger: CACTGGAAGAGCTTCAAGAGGAGTTTGTGAAACTCAAAGTCTAATGGTTTTGATTAGAAACTTCCAGGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR TCA 72 bp | TATACTCCTATACAATTTCCTCCAACTCGGTTCATTTaGTACAGCTGCAAAAATACTGTCTTTGGTGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: YTPIQFPPTRFI*YSCKNTVFGGQ Trigger: TTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAACCGAGTTGGAGGAAATTGTATAGGAGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR-3UTR CAA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTAAATTCCTTAATTTATTaGTGGCAGCACTCAGAATGC | + |
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Preference number: 3 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLNSLIY*WQHSEC Trigger: GCATTCTGAGTGCTGCCACAAATAAATTAAGGAATT...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR TCA 90 bp | TTGGCATGGTGTCACTGCCCAACACTTTCAGATAACTCAACTGAAGAAGTTGACACGTCAGCTTGGAGCTaGGGAGCGGGGACGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LAWCHCPTLSDNSTEEVDTSAWS*GAGTRL Trigger: CAGGCGCGTCCCCGCTCCTCAGCTCCAAGCTGACGT...GTCAACTTCTTCAGTTGAGTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR GCA 90 bp | AATACTGTCTTTGGTGGTCAAGTAGAAGGCTCACGAAAACAGCACACCCACAGTGCTACCCTCAGGGTGTaGCCTACACTGCGGCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: NTVFGGQVEGSRKQHTHSATLRV*PTLRRP Trigger: CGGACGCCGCAGTGTAGGGCACACCCTGAGGGTAGC...ACTGTGGGTGTGCTGTTTTCGTGAGCCTTCTACTTGACCACCAAAGACAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR GCA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAAGAGCGGGGACGCGCCTaGAGGCCTGCCTCCAAACTA | + |
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Preference number: 4 (lower is better) Translates to: VTVKPELFFPGWCERCKKERGRA*RPASKL Trigger: TAGTTTGGAGGCAGGCCTGCAGGCGCGTCCCCGCTC...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | TCAATACTGTCCAGTCTTAAAGCTGCAGAGAATCGGGCTTTGCAGAACACTCCACGTCCCATCCATCCATaGCCCCCACCGCTTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: SILSSLKAAENRALQNTPRPIHP*PPPLPR Trigger: ACGAGGAAGCGGTGGGGGCCATGGATGGATGGGACG...TGGAGTGTTCTGCAAAGCCCGATTCTCTGCAGCTTTAAGACTGGACAGTATTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR GCA 90 bp | TTCCTTAATTTATTTGTGGCAGCACTCAGAATGCAAGGTTTCACAAGTGTCTCCGGGTGTGCCCTACACTaGGGCGTCCGCCTCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FLNLFVAALRMQGFTSVSGCALH*GVRLRC Trigger: GCATCTGAGGCGGACGCCGCAGTGTAGGGCACACCC...GGAGACACTTGTGAAACCTTGCATTCTGAGTGCTGCCACAAATAAATTAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR TCA 90 bp | GTTCATTTGATACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGGCTCCACACCGCTTCCTCCTaGAGGGTCTGCATGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHLIQLQKYCLWWSSRRLHTASS*RVCMGL Trigger: CAGCCCCATGCAGACCCTTCAGGAGGAAGCGGTGTG...GAGCCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAATTGGTGGCAGCTGGGTaGCAGGACAATCCAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VTVKPELFFPGWCERCKKLVAAG*QDNPGI Trigger: GATGCCTGGATTGTCCTGCCACCCAGCTGCCACCAA...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTTCCTTACTCCACAGCTaGGTCACACACCCTCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSSNLGVVLSTSSAESVFSLLHS*VTHPRQ Trigger: CTGCCGAGGGTGTGTGACCCAGCTGTGGAGTAAGGA...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCAGGCTGGAGTGCAGTaGCTCAGTCTCGGCTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: CSSNLGVVLSTSSAESVFQAGVQ*LSLGLL Trigger: CAGTAAGCCGAGACTGAGCCACTGCACTCCAGCCTG...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR GCA 90 bp | TTCCTTAATTTATTTGTGGCAGCACTCAGAATGCAAGGTTTCACAAGTGTCTCCTTGCCCAGGCTGGAGTaGAGTGGCTCAGTCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLNLFVAALRMQGFTSVSLPRLE*SGSVSA Trigger: AGCCGAGACTGAGCCACTGCACTCCAGCCTGGGCAA...GGAGACACTTGTGAAACCTTGCATTCTGAGTGCTGCCACAAATAAATTAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR TCA 90 bp | TTGGCATGGTGTCACTGCCCAACACTTTCAGATAACTCAACTGAAGAAGTTGACTTGAAGCTCTTCCAGTaGGGCCTGCACATCGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LAWCHCPTLSDNSTEEVDLKLFQ*GLHIGM Trigger: CATACCGATGTGCAGGCCTCACTGGAAGAGCTTCAA...GTCAACTTCTTCAGTTGAGTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR TCA 90 bp | AATACTGTCTTTGGTGGTCAAGTAGAAGGCTCACGAAAACAGCACACCCACAGTTTCACAAACTCCTCTTaGAGCTCTTCCAGTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTVFGGQVEGSRKQHTHSFTNSS*SSSSEA Trigger: GGCCTCACTGGAAGAGCTTCAAGAGGAGTTTGTGAA...ACTGTGGGTGTGCTGTTTTCGTGAGCCTTCTACTTGACCACCAAAGACAGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR GCA 90 bp | TTGGCATGGTGTCACTGCCCAACACTTTCAGATAACTCAACTGAAGAAGTTGACACCATGTTGGCCAGCTaGAAGTTGGGACGAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAWCHCPTLSDNSTEEVDTMLAS*KLGRKL Trigger: CAGCTTTCGTCCCAACTTGCAGCTGGCCAACATGGT...GTCAACTTCTTCAGTTGAGTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR GCA 90 bp | TCTTACTTTCATAATTCTTTGATTCTAGCTTGCAGAGTCAAGACGAACTCTAACGCTGCAGCCCCCAGCTaGTCGGTCCTGTCACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SYFHNSLILACRVKTNSNAAAPS*SVLSRL Trigger: GAGACGTGACAGGACCGAGCAGCTGGGGGCTGCAGC...GTTAGAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGAATTATGAAAGTAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | TTGGCATGGTGTCACTGCCCAACACTTTCAGATAACTCAACTGAAGAAGTTGACGGAGTGGGGCACATCTaGCGAATTATCTGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LAWCHCPTLSDNSTEEVDGVGHI*RIIWTM Trigger: CATGGTCCAGATAATTCGCCAGATGTGCCCCACTCC...GTCAACTTCTTCAGTTGAGTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTAAGGAAGGAGGCGGGTaGATGTCAGGATACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSSNLGVVLSTSSAESVFKEGGG*MSGYSS Trigger: AGAGCTGTATCCTGACATCCACCCGCCTCCTTCCTT...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR TCA 90 bp | TTCCTTAATTTATTTGTGGCAGCACTCAGAATGCAAGGTTTCACAAGTGTCTCCTCCAAACTACTCTGGTaGCCCGAGGCTGTCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLNLFVAALRMQGFTSVSSKLLW*PEAVLN Trigger: GTTGAGGACAGCCTCGGGTCACCAGAGTAGTTTGGA...GGAGACACTTGTGAAACCTTGCATTCTGAGTGCTGCCACAAATAAATTAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR TCA 90 bp | TTGGCATGGTGTCACTGCCCAACACTTTCAGATAACTCAACTGAAGAAGTTGACGTTCATGCTTGGTGGTaGCAGCTGCAGTACATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAWCHCPTLSDNSTEEVDVHAWW*QLQYIL Trigger: CAAGATGTACTGCAGCTGTCACCACCAAGCATGAAC...GTCAACTTCTTCAGTTGAGTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR GCA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTACCCCCTCTCTCAGGGTaGGAACGCCCAGATCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLPPLSG*ERPDPD Trigger: GTCTGGATCTGGGCGTTCGCACCCTGAGAGAGGGGG...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR GCA 90 bp | TCAATACTGTCCAGTCTTAAAGCTGCAGAGAATCGGGCTTTGCAGAACACTCCAGGGTGGTGTGAAAGGTaGAAGAAAACACAAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SILSSLKAAENRALQNTPGWCER*KKTQAA Trigger: AGCAGCTTGTGTTTTCTTGCACCTTTCACACCACCC...TGGAGTGTTCTGCAAAGCCCGATTCTCTGCAGCTTTAAGACTGGACAGTATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR TCA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTGCTTCCTAAAACCTaGCACCATTTAATGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSSNLGVVLSTSSAESVFLLPKT*HHLMVP Trigger: GGGCACCATTAAATGGTGTCAGGTTTTAGGAAGCAG...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR TCA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTCCTGGGTGGTGTaGAAGGTGCAAGAAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: CSSNLGVVLSTSSAESVFLSWVV*KVQENT Trigger: TGTGTTTTCTTGCACCTTTCACACCACCCAGGAAAG...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR GCA 90 bp | TCTTACTTTCATAATTCTTTGATTCTAGCTTGCAGAGTCAAGACGAACTCTAACGGCTGTCCTCAACCTTaGTCTTCTTCCTCGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SYFHNSLILACRVKTNSNGCPQP*SSSSGP Trigger: CGGCCCCGAGGAAGAAGAGCAAGGTTGAGGACAGCC...GTTAGAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGAATTATGAAAGTAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR GCA 90 bp | TCAATACTGTCCAGTCTTAAAGCTGCAGAGAATCGGGCTTTGCAGAACACTCCACAGAGAATCGGGCTTTaGAGAACACTCCACTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SILSSLKAAENRALQNTPQRIGL*RTLHCF Trigger: AAAACAGTGGAGTGTTCTGCAAAGCCCGATTCTCTG...TGGAGTGTTCTGCAAAGCCCGATTCTCTGCAGCTTTAAGACTGGACAGTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAAAGTTTCAGGGCTTCCTaGTGTTTAAAGCACATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTVKPELFFPGWCERCKKSFRAS*CLKHMP Trigger: GGGCATGTGCTTTAAACACCAGGAAGCCCTGAAACT...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | TCTTACTTTCATAATTCTTTGATTCTAGCTTGCAGAGTCAAGACGAACTCTAACCTCACAGCCTCTCTCTaGGATCGGTGGGGACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SYFHNSLILACRVKTNSNLTASL*DRWGQS Trigger: GCTCTGTCCCCACCGATCCCAGAGAGAGGCTGTGAG...GTTAGAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGAATTATGAAAGTAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | GTTCATTTGATACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGGCTCACAACACCTCTCGAATaGAGCCGTCCCATCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VHLIQLQKYCLWWSSRRLTTPLE*SRPIHP Trigger: TGGATGGATGGGACGGCTCCATTCGAGAGGTGTTGT...GAGCCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | AATACTGTCTTTGGTGGTCAAGTAGAAGGCTCACGAAAACAGCACACCCACAGTTACTGTTTCTCACAGTaGTCTATGCTGACAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTVFGGQVEGSRKQHTHSYCFSQ*SMLTAR Trigger: CCTTGCTGTCAGCATAGACCACTGTGAGAAACAGTA...ACTGTGGGTGTGCTGTTTTCGTGAGCCTTCTACTTGACCACCAAAGACAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | AATACTGTCTTTGGTGGTCAAGTAGAAGGCTCACGAAAACAGCACACCCACAGTTTGTTCTTCCAACCTTaGGGTTGTTCTGTCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: NTVFGGQVEGSRKQHTHSLFFQP*GCSVHK Trigger: CTTGTGGACAGAACAACCCCAAGGTTGGAAGAACAA...ACTGTGGGTGTGCTGTTTTCGTGAGCCTTCTACTTGACCACCAAAGACAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR GCA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTTGGCAGCACTCAGAATaGAAGGTTTCACAAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSSNLGVVLSTSSAESVFWQHSE*KVSQVS Trigger: AGACACTTGTGAAACCTTGCATTCTGAGTGCTGCCA...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | GTTCATTTGATACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGGCTCTTCCCCGATAAGGAGTaGGGCACATCTGGCGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: VHLIQLQKYCLWWSSRRLFPDKE*GTSGEL Trigger: TAATTCGCCAGATGTGCCCCACTCCTTATCGGGGAA...GAGCCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR CAA 72 bp | TCCAGTAGGTTATGGGTAATCAGTGAAAGTTCATGCTaGGTGGTGACAGCTGCAGTACATCTTGAATACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRLWVISESSC*VVTAAVHLEYQ Trigger: CTGGTATTCAAGATGTACTGCAGCTGTCACCACCAAGCATGAACTTTCACTGATTACCCATAACCTACTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR TCA 90 bp | GGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGGCAACCAAGACATGAATCTGGTCCTTaGAAGACTAGCCAAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVVLSTSSAESVFLWQPRHESGP*KTSQEN Trigger: ATTTTCTTGGCTAGTCTTTCAAGGACCAGATTCATG...TCTTGGTTGCCAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR GCA 90 bp | TCAATACTGTCCAGTCTTAAAGCTGCAGAGAATCGGGCTTTGCAGAACACTCCATTCGTCCTCATCGTATaGTTCCAGTATTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SILSSLKAAENRALQNTPFVLIV*FQYFFF Trigger: GAAGAAGAAATACTGGAAGCATACGATGAGGACGAA...TGGAGTGTTCTGCAAAGCCCGATTCTCTGCAGCTTTAAGACTGGACAGTATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR GCA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTGCATCTGGTCCCTCTTaGAGAGTGATGAATGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSSNLGVVLSTSSAESVFASGPS*RVMNDF Trigger: AAAATCATTCATCACTCTGCAAGAGGGACCAGATGC...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR GCA 90 bp | TTGGCATGGTGTCACTGCCCAACACTTTCAGATAACTCAACTGAAGAAGTTGACATAACACTCTTGCACTaGTTTCTCCCCAAAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAWCHCPTLSDNSTEEVDITLLH*FLPKAR Trigger: TCTAGCTTTGGGGAGAAAGCAGTGCAAGAGTGTTAT...GTCAACTTCTTCAGTTGAGTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | GTTCATTTGATACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGGCTCTCCAACTTTATTTCCTaGTACTCCTGCACCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHLIQLQKYCLWWSSRRLSNFIS*YSCTTS Trigger: GGAGGTGGTGCAGGAGTACCAGGAAATAAAGTTGGA...GAGCCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | TTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGCAGGGCAAACTGGAATaGAATGTACTGTTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FQPWGCSVHKFSRIRFSLQGKLE*NVLFLT Trigger: TGTGAGAAACAGTACATTCCATTCCAGTTTGCCCTG...CAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR TCA 90 bp | TTCCTTAATTTATTTGTGGCAGCACTCAGAATGCAAGGTTTCACAAGTGTCTCCGCATCCAGTTATGCCTaGTCCCCAATAAGTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FLNLFVAALRMQGFTSVSASSYA*SPISEI Trigger: GATTTCACTTATTGGGGATCAGGCATAACTGGATGC...GGAGACACTTGTGAAACCTTGCATTCTGAGTGCTGCCACAAATAAATTAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR TCA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAACCAACTCGGTTCATTTaGTACAGCTGCAAAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: VTVKPELFFPGWCERCKKPTRFI*YSCKNT Trigger: AGTATTTTTGCAGCTGTATCAAATGAACCGAGTTGG...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR TCA 90 bp | GGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGGCAACCAAGAAGCTGCAGTACATCTTaGATACCAGTTTTCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVVLSTSSAESVFLWQPRSCSTS*IPVFFN Trigger: ATTGAAGAAAACTGGTATTCAAGATGTACTGCAGCT...TCTTGGTTGCCAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR GCA 90 bp | TTCCTTAATTTATTTGTGGCAGCACTCAGAATGCAAGGTTTCACAAGTGTCTCCTTGGCATGGTGTCACTaGCCAACACTTTCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLNLFVAALRMQGFTSVSLAWCH*PTLSDN Trigger: GTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA...GGAGACACTTGTGAAACCTTGCATTCTGAGTGCTGCCACAAATAAATTAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | TTGGCATGGTGTCACTGCCCAACACTTTCAGATAACTCAACTGAAGAAGTTGACATAAGTAAGGCTTTCTaGGCCAAAAAGCCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAWCHCPTLSDNSTEEVDISKAF*AKKPLL Trigger: AAGAAGAGGCTTTTTGGCCCAGAAAGCCTTACTTAT...GTCAACTTCTTCAGTTGAGTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | TCTTACTTTCATAATTCTTTGATTCTAGCTTGCAGAGTCAAGACGAACTCTAACTTTATTGGTGGCAGCTaGGTGGCAGGACAATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SYFHNSLILACRVKTNSNFIGGS*VAGQSR Trigger: CCTGGATTGTCCTGCCACCCAGCTGCCACCAATAAA...GTTAGAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGAATTATGAAAGTAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTAAAAGCAGGGCAAACTaGAATGGAATGTACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSSNLGVVLSTSSAESVFKSRAN*NGMYCF Trigger: GAAACAGTACATTCCATTCCAGTTTGCCCTGCTTTT...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR TCA 90 bp | GTTCATTTGATACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGGCTCCTTTCTTGCTCTATCTaGAGTATTCCCACCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VHLIQLQKYCLWWSSRRLLSCSI*SIPTRV Trigger: AACTCTGGTGGGAATACTTCAGATAGAGCAAGAAAG...GAGCCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR TCA 90 bp | GTTCATTTGATACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGGCTCGCACACCCACAGTTTTaGAAGCCTTATTCTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VHLIQLQKYCLWWSSRRLAHPQF*KPYSEC Trigger: ACATTCAGAATAAGGCTTTCAAAACTGTGGGTGTGC...GAGCCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR TCA 90 bp | GTTCATTTGATACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGGCTCGCCTGCACATCGGTATaGAACACATTCTTTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VHLIQLQKYCLWWSSRRLACTSV*NTFFPK Trigger: TTTTGGAAAGAATGTGTTTCATACCGATGTGCAGGC...GAGCCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR GCA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTATTCATGTCATTCTCCTaGCTCAGCCTCTTGCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLFMSFS*LSLLRA Trigger: AGCTCGCAAGAGGCTGAGGCAGGAGAATGACATGAA...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | TCTTACTTTCATAATTCTTTGATTCTAGCTTGCAGAGTCAAGACGAACTCTAACTTATCTGGACCATGTTaGCCAGCTGCAAGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SYFHNSLILACRVKTNSNLSGPC*PAASWD Trigger: GTCCCAACTTGCAGCTGGCCAACATGGTCCAGATAA...GTTAGAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGAATTATGAAAGTAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CCA 90 bp | TTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGTCCTTAATTTATTTGTaGCAGCACTCAGAATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQPWGCSVHKFSRIRFSLSLIYL*QHSECK Trigger: CTTGCATTCTGAGTGCTGCCACAAATAAATTAAGGA...CAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | TTCCTTAATTTATTTGTGGCAGCACTCAGAATGCAAGGTTTCACAAGTGTCTCCACACCCAAGTTTCTCTaGAGTATTTGCCTGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLNLFVAALRMQGFTSVSTPKFL*SICLEV Trigger: AACTTCCAGGCAAATACTCCAGAGAAACTTGGGTGT...GGAGACACTTGTGAAACCTTGCATTCTGAGTGCTGCCACAAATAAATTAAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR TCA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTATTAAAGCACATGCCCTaGTCATTACTCCGGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLLKHMP*SLLRFP Trigger: GGGAAACCGGAGTAATGATCAGGGCATGTGCTTTAA...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR GCA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTAATCAGTGAAAGTTCATaGTTGGTGGTGACAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLISESS*LVVTAA Trigger: TGCAGCTGTCACCACCAAGCATGAACTTTCACTGAT...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | TCTTACTTTCATAATTCTTTGATTCTAGCTTGCAGAGTCAAGACGAACTCTAACTCGTCATCTTGGTCTTaGAACAACTCTTCGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYFHNSLILACRVKTNSNSSSWS*NNSSSA Trigger: TGCTGACGAAGAGTTGTTCCAAGACCAAGATGACGA...GTTAGAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGAATTATGAAAGTAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | TCTTACTTTCATAATTCTTTGATTCTAGCTTGCAGAGTCAAGACGAACTCTAACAATGAACACCTCCTGTaGCTACCCAACTTTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SYFHNSLILACRVKTNSNNEHLL*LPNFSH Trigger: GTGTGAAAAGTTGGGTAGCCACAGGAGGTGTTCATT...GTTAGAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGAATTATGAAAGTAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR TCA 90 bp | ATACTCCTATACAATTTCCTCCAACTCGGTTCATTTGATACAGCTGCAAAAATAGTTATGGGTAATCAGTaGAAGTTCATGCTTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLYNFLQLGSFDTAAKIVMGNQ*KFMLGG Trigger: ACCACCAAGCATGAACTTTCACTGATTACCCATAAC...TATTTTTGCAGCTGTATCAAATGAACCGAGTTGGAGGAAATTGTATAGGAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR GCA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTATTTTATACACCCGTCTaGTTCCTAAAACCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLFYTPV*FLKPDT Trigger: GGTGTCAGGTTTTAGGAAGCAGACGGGTGTATAAAA...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | TCTTACTTTCATAATTCTTTGATTCTAGCTTGCAGAGTCAAGACGAACTCTAACAGTTCATCGTCATCTTaGTCTTGGAACAACTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SYFHNSLILACRVKTNSNSSSSS*SWNNSS Trigger: CGAAGAGTTGTTCCAAGACCAAGATGACGATGAACT...GTTAGAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGAATTATGAAAGTAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | ATACTCCTATACAATTTCCTCCAACTCGGTTCATTTGATACAGCTGCAAAAATAACGAACTCTAACTCATaGGATGGACAAACTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILLYNFLQLGSFDTAAKITNSNS*DGQTGR Trigger: TCTTCCAGTTTGTCCATCCCATGAGTTAGAGTTCGT...TATTTTTGCAGCTGTATCAAATGAACCGAGTTGGAGGAAATTGTATAGGAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR CAA 72 bp | ATATACTCCTATACAATTTCCTCCAACTCGGTTCATTaGATACAGCTGCAAAAATACTGTCTTTGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYSYTISSNSVH*IQLQKYCLWWS Trigger: TGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAACCGAGTTGGAGGAAATTGTATAGGAGTATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| 3UTR CAA 72 bp | TGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTaGGCAACCAAGAAACTTCAATATGTAACAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSVHKFSRIRFS*ATKKLQYVTEN Trigger: GTTTTCTGTTACATATTGAAGTTTCTTGGTTGCCAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR GCA 90 bp | ATACTCCTATACAATTTCCTCCAACTCGGTTCATTTGATACAGCTGCAAAAATATCTTTGATTCTAGCTTaGAGAGTCAAGACGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLYNFLQLGSFDTAAKISLILA*RVKTNS Trigger: AGAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGA...TATTTTTGCAGCTGTATCAAATGAACCGAGTTGGAGGAAATTGTATAGGAGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTAAATGAACGGCGAAATTaGTGTTTGCCCATTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLNERRN*CLPIDI Trigger: AATGTCAATGGGCAAACACCAATTTCGCCGTTCATT...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CCA 90 bp | ATACTCCTATACAATTTCCTCCAACTCGGTTCATTTGATACAGCTGCAAAAATAATTTCCAGTAGGTTATaGGTAATCAGTGAAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLYNFLQLGSFDTAAKIISSRL*VISESS Trigger: TGAACTTTCACTGATTACCCATAACCTACTGGAAAT...TATTTTTGCAGCTGTATCAAATGAACCGAGTTGGAGGAAATTGTATAGGAGTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS GCA 90 bp | TCGGTCCTGTCACGTCTCTCGCTACCCTCAGGGTGTGCCCTACACTaGGGCGTCCGCCTCAGATGCAGCCGCTGGCTACCCTGCCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVLSRLSLPSGCALH*GVRLRCSRWLPCPR Trigger: CCTCGGGCAGGGTAGCCAGCGGCTGCATCTGAGGCGGACGCCGCAGTGTAGGGCACACCCTGAGGGTAGCGAGAGACGTGACAGGACCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612671.1 |
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| CDS GCA 90 bp | CCCCAGCTGCTCGGTCCTGTCACGTCTCTCGCTACCCTCAGGGTGTaGCCTACACTGCGGCGTCCGCCTCAGATGCAGCCGCTGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: PQLLGPVTSLATLRV*PTLRRPPQMQPLAT Trigger: GGTAGCCAGCGGCTGCATCTGAGGCGGACGCCGCAGTGTAGGGCACACCCTGAGGGTAGCGAGAGACGTGACAGGACCGAGCAGCTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612671.1 |
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| CDS TCA 90 bp | GAGGAGCGGGGACGCGCCTGCAGGCCTGCCTCCAAACTACTCTGGTaGCCCGAGGCTGTCCTCAACCTTGCTCTTCTTCCTCGGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: EERGRACRPASKLLW*PEAVLNLALLPRGR Trigger: GCGGCCCCGAGGAAGAAGAGCAAGGTTGAGGACAGCCTCGGGTCACCAGAGTAGTTTGGAGGCAGGCCTGCAGGCGCGTCCCCGCTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS CCA 90 bp | GCTTCCTCGTCCTCCTCCTCCTCCCATTCATCTTCCTCCTCGTTCTaGTCCTCCTCGTCCTCCTTACTCCACAGCTGGGTCACACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASSSSSSSHSSSSSF*SSSSSLLHSWVTHP Trigger: AGGGTGTGTGACCCAGCTGTGGAGTAAGGAGGACGAGGAGGACCAGAACGAGGAGGAAGATGAATGGGAGGAGGAGGAGGACGAGGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS-3UTR CAA 90 bp | TTGGCATGGTGTCACTGCCCAACACTTTCAGATAACTCAACTGAAGAAGTTGACGGCCGCAGGGGAGCTTaGACCCCCTCTCTCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAWCHCPTLSDNSTEEVDGRRGA*TPSLRV Trigger: CACCCTGAGAGAGGGGGTCAAAGCTCCCCTGCGGCC...GTCAACTTCTTCAGTTGAGTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | TTGGCATGGTGTCACTGCCCAACACTTTCAGATAACTCAACTGAAGAAGTTGACAGGCTGTCCTCAACCTaGCTCTTCTTCCTCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAWCHCPTLSDNSTEEVDRLSST*LFFLGA Trigger: GGCCCCGAGGAAGAAGAGCAAGGTTGAGGACAGCCT...GTCAACTTCTTCAGTTGAGTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS CCA 90 bp | GTTATACCACTGTCACCGAGCCAGAGTTCATCGTCATCTTGGTCTTaGAACAACTCTTCGTCAGCATTCCCCCGATACAACACCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VIPLSPSQSSSSSWS*NNSSSAFPRYNTSR Trigger: TCGAGAGGTGTTGTATCGGGGGAATGCTGACGAAGAGTTGTTCCAAGACCAAGATGACGATGAACTCTGGCTCGGTGACAGTGGTATAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS GCA 90 bp | CGGGTGGATGTCAGGATACAGCTCTTCATCTTCGTCCTCATCGTATaGTTCCAGTATTTCTTCTTCTCGGTAGACATCAATTCTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVDVRIQLFIFVLIV*FQYFFFSVDINSQV Trigger: GACCTGAGAATTGATGTCTACCGAGAAGAAGAAATACTGGAAGCATACGATGAGGACGAAGATGAAGAGCTGTATCCTGACATCCACCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS CCA 90 bp | GTCAGTGAAACAGTGGGCTCCCTAAAGCTGAAGGGCAGGTGTAATTaGAGTGTGCTTAAGTGTATTGGAAGGCTAAGAGCTAAGGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: VSETVGSLKLKGRCN*SVLKCIGRLRAKVI Trigger: TATGACCTTAGCTCTTAGCCTTCCAATACACTTAAGCACACTCCAATTACACCTGCCCTTCAGCTTTAGGGAGCCCACTGTTTCACTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513146.1 |
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| CDS-3UTR CAA 90 bp | TTGGCATGGTGTCACTGCCCAACACTTTCAGATAACTCAACTGAAGAAGTTGACGCAGAGAATCGGGCTTaGCAGAACACTCCACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAWCHCPTLSDNSTEEVDAENRA*QNTPLF Trigger: AAACAGTGGAGTGTTCTGCAAAGCCCGATTCTCTGC...GTCAACTTCTTCAGTTGAGTTATCTGAAAGTGTTGGGCAGTGACACCATGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAACTTCCAACCTTGGGGTaGTTCTGTCCACAAGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VTVKPELFFPGWCERCKKLPTLG*FCPQVQ Trigger: CTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAG...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | AATACTGTCTTTGGTGGTCAAGTAGAAGGCTCACGAAAACAGCACACCCACAGTCGGCGAAATTGGTGTTaGCCCATTGACATTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTVFGGQVEGSRKQHTHSRRNWC*PIDISV Trigger: CACTGAAATGTCAATGGGCAAACACCAATTTCGCCG...ACTGTGGGTGTGCTGTTTTCGTGAGCCTTCTACTTGACCACCAAAGACAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS CCA 90 bp | ACTGCTTGTGCTGAGGTCCCAAATGTCTATTATCTCCAAGTACTGTaGCTTTCTATTCCTATCTGTACCTGTCCCAGGGAATTGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TACAEVPNVYYLQVL*LSIPICTCPRELVK Trigger: CTTGACCAATTCCCTGGGACAGGTACAGATAGGAATAGAAAGCCACAGTACTTGGAGATAATAGACATTTGGGACCTCAGCACAAGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000514805.1 ENST00000612671.1 |
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| CDS-3UTR CAA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAAAGTGAAAGTTCATGCTaGGTGGTGACAGCTGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VTVKPELFFPGWCERCKKSESSC*VVTAAV Trigger: TACTGCAGCTGTCACCACCAAGCATGAACTTTCACT...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS GCA 90 bp | CCTGTGGCTACCCAACTTTTCACACATCTTACTGATTATAGGCCTTaGTGTGAATGCTTTCTTGCTCTATCTGAAGTATTCCCACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVATQLFTHLTDYRP*CECFLALSEVFPPE Trigger: CTCTGGTGGGAATACTTCAGATAGAGCAAGAAAGCATTCACAGCAAGGCCTATAATCAGTAAGATGTGTGAAAAGTTGGGTAGCCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611618.1 ENST00000612671.1 |
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| CDS-3UTR CAA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTATGTAGATACGTCAGCTaGGAGCTGAGGAGCGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLCRYVS*ELRSGD Trigger: GTCCCCGCTCCTCAGCTCCAAGCTGACGTATCTACA...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | TTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGGAGTTCATCGTCATCTaGGTCTTGGAACAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQPWGCSVHKFSRIRFSLEFIVI*VLEQLF Trigger: GAAGAGTTGTTCCAAGACCAAGATGACGATGAACTC...CAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | TCAATACTGTCCAGTCTTAAAGCTGCAGAGAATCGGGCTTTGCAGAACACTCCATTCTTTGATTCTAGCTaGCAGAGTCAAGACGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SILSSLKAAENRALQNTPFFDSS*QSQDEL Trigger: GAGTTCGTCTTGACTCTGCAAGCTAGAATCAAAGAA...TGGAGTGTTCTGCAAAGCCCGATTCTCTGCAGCTTTAAGACTGGACAGTATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | AATACTGTCTTTGGTGGTCAAGTAGAAGGCTCACGAAAACAGCACACCCACAGTACTCAACTGAAGAAGTaGACCCTATCTTCTGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: NTVFGGQVEGSRKQHTHSTQLKK*TLSSAK Trigger: TTTTGCAGAAGATAGGGTCAACTTCTTCAGTTGAGT...ACTGTGGGTGTGCTGTTTTCGTGAGCCTTCTACTTGACCACCAAAGACAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | GGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGGCAACCAAGACTTTTAATAACACTCTaGCACTGCTTTCTCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVVLSTSSAESVFLWQPRLLITL*HCFLPK Trigger: TTTGGGGAGAAAGCAGTGCAAGAGTGTTATTAAAAG...TCTTGGTTGCCAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS CCA 90 bp | CCTCATCAAATAAAGAGAAGTTTAGCAACTAAGTACCTGAGGAGGTaGGAAAGGAATGCTACTCATTCCTCAGCTCTCCTAGTTACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PHQIKRSLATKYLRR*ERNATHSSALLVTF Trigger: AAAGGTAACTAGGAGAGCTGAGGAATGAGTAGCATTCCTTTCCCACCTCCTCAGGTACTTAGTTGCTAAACTTCTCTTTATTTGATGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612671.1 |
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| CDS-3UTR CAA 90 bp | TTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGTCCAACTCGGTTCATTaGATACAGCTGCAAAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: FQPWGCSVHKFSRIRFSLSNSVH*IQLQKY Trigger: GTATTTTTGCAGCTGTATCAAATGAACCGAGTTGGA...CAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | TGTTCTTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTATTGGTGTTTGCCCATaGACATTTCAGTGTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: CSSNLGVVLSTSSAESVFIGVCP*TFQCQC Trigger: ACATTGACACTGAAATGTCAATGGGCAAACACCAAT...AAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS GCA 90 bp | ACCCAACTTTTCACACATCTTACTGATTATAGGCCTTGCTGTGAATaGTTTCTTGCTCTATCTGAAGTATTCCCACCAGAGTTGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQLFTHLTDYRPCCE*FLALSEVFPPELFP Trigger: TGGAAACAACTCTGGTGGGAATACTTCAGATAGAGCAAGAAAGCATTCACAGCAAGGCCTATAATCAGTAAGATGTGTGAAAAGTTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611618.1 ENST00000612671.1 |
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| CDS-3UTR CAA 90 bp | GTCACTGTTAAGCCTGAACTTTTCTTTCCTGGGTGGTGTGAAAGGTGCAAGAAAAATTCCTTAATTTATTaGTGGCAGCACTCAGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: VTVKPELFFPGWCERCKKNSLIY*WQHSEC Trigger: GCATTCTGAGTGCTGCCACAAATAAATTAAGGAATT...TTTCTTGCACCTTTCACACCACCCAGGAAAGAAAAGTTCAGGCTTAACAGTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | TTCCTTAATTTATTTGTGGCAGCACTCAGAATGCAAGGTTTCACAAGTGTCTCCGCTGTGAATGCTTTCTaGCTCTATCTGAAGTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLNLFVAALRMQGFTSVSAVNAF*LYLKYS Trigger: GGAATACTTCAGATAGAGCAAGAAAGCATTCACAGC...GGAGACACTTGTGAAACCTTGCATTCTGAGTGCTGCCACAAATAAATTAAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | TTCCAACCTTGGGGTTGTTCTGTCCACAAGTTCAGCAGAATCCGTTTTTCTTTGAGAATCCGTTTTTCTTaGGCAACCAAGAAACTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: FQPWGCSVHKFSRIRFSLRIRFS*ATKKLQ Trigger: TTGAAGTTTCTTGGTTGCCAAAGAAAAACGGATTCT...CAAAGAAAAACGGATTCTGCTGAACTTGTGGACAGAACAACCCCAAGGTTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CAA 90 bp | GTTCATTTGATACAGCTGCAAAAATACTGTCTTTGGTGGTCAAGTAGAAGGCTCTTAAGCTTTCACGGCTaGGAAGATTCCTGTGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: VHLIQLQKYCLWWSSRRLLSFHG*EDSCEY Trigger: ATATTCACAGGAATCTTCCAAGCCGTGAAAGCTTAA...GAGCCTTCTACTTGACCACCAAAGACAGTATTTTTGCAGCTGTATCAAATGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | ATACTCCTATACAATTTCCTCCAACTCGGTTCATTTGATACAGCTGCAAAAATAATTGTTCTTCCAACCTaGGGGTTGTTCTGTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: ILLYNFLQLGSFDTAAKIIVLPT*GLFCPQ Trigger: TTGTGGACAGAACAACCCCAAGGTTGGAAGAACAAT...TATTTTTGCAGCTGTATCAAATGAACCGAGTTGGAGGAAATTGTATAGGAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
||
| CDS-3UTR CAA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTAGTATTCCCACCAGAGTaGTTTCCAACTTTATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLVFPPE*FPTLFP Trigger: AGGAAATAAAGTTGGAAACAACTCTGGTGGGAATAC...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS-3UTR CAA 90 bp | TCTTCAATCTTTGCCAAAAACCCAAATTTAACACAGTTTGCTGTAGTGCCATTACAGCTGCAGTACATCTaGAATACCAGTTTTCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSIFAKNPNLTQFAVVPLQLQYI*NTSFLQ Trigger: TTGAAGAAAACTGGTATTCAAGATGTACTGCAGCTG...TAATGGCACTACAGCAAACTGTGTTAAATTTGGGTTTTTGGCAAAGATTGAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS TCA 72 bp | TGCCCGCCGGCAGGTGTAGATACGTCAGCTTGGAGCTaGGGAGCGGGGACGCGCCTGCAGGCCTGCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: CPPAGVDTSAWS*GAGTRLQACLQ Trigger: TTGGAGGCAGGCCTGCAGGCGCGTCCCCGCTCCTCAGCTCCAAGCTGACGTATCTACACCTGCCGGCGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS GCA 72 bp | TCACGTCTCTCGCTACCCTCAGGGTGTGCCCTACACTaGGGCGTCCGCCTCAGATGCAGCCGCTGGCTACCC | + |
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Preference number: 6 (lower is better) Translates to: SRLSLPSGCALH*GVRLRCSRWLP Trigger: GGGTAGCCAGCGGCTGCATCTGAGGCGGACGCCGCAGTGTAGGGCACACCCTGAGGGTAGCGAGAGACGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612671.1 |
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| CDS GCA 72 bp | CTCGGTCCTGTCACGTCTCTCGCTACCCTCAGGGTGTaGCCTACACTGCGGCGTCCGCCTCAGATGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: LGPVTSLATLRV*PTLRRPPQMQP Trigger: CGGCTGCATCTGAGGCGGACGCCGCAGTGTAGGGCACACCCTGAGGGTAGCGAGAGACGTGACAGGACCGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612671.1 |
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| CDS CAA 72 bp | ATCTTAATGCCCGCCGGCAGGTGTAGATACGTCAGCTaGGAGCTGAGGAGCGGGGACGCGCCTGCAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ILMPAGRCRYVS*ELRSGDAPAGL Trigger: CAGGCCTGCAGGCGCGTCCCCGCTCCTCAGCTCCAAGCTGACGTATCTACACCTGCCGGCGGGCATTAAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS TCA 72 bp | GGACGCGCCTGCAGGCCTGCCTCCAAACTACTCTGGTaGCCCGAGGCTGTCCTCAACCTTGCTCTTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GRACRPASKLLW*PEAVLNLALLP Trigger: AGGAAGAAGAGCAAGGTTGAGGACAGCCTCGGGTCACCAGAGTAGTTTGGAGGCAGGCCTGCAGGCGCGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS GCA 72 bp | CAAACTACTCTGGTGACCCGAGGCTGTCCTCAACCTTaGTCTTCTTCCTCGGGGCCGCAGGGGAGCTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: QTTLVTRGCPQP*SSSSGPQGSFD Trigger: GTCAAAGCTCCCCTGCGGCCCCGAGGAAGAAGAGCAAGGTTGAGGACAGCCTCGGGTCACCAGAGTAGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS CCA 72 bp | CTTCGTCAGCATTCCCCCGATACAACACCTCTCGAATaGAGCCGTCCCATCCATCCATGGCCCCCACCGCTT | + |
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Preference number: 6 (lower is better) Translates to: LRQHSPDTTPLE*SRPIHPWPPPL Trigger: AAGCGGTGGGGGCCATGGATGGATGGGACGGCTCCATTCGAGAGGTGTTGTATCGGGGGAATGCTGACGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS CCA 72 bp | GTGAACTGCCCTGGAAGGGGCAAGGAAGGAGGCGGGTaGATGTCAGGATACAGCTCTTCATCTTCGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: VNCPGRGKEGGG*MSGYSSSSSSS Trigger: TGAGGACGAAGATGAAGAGCTGTATCCTGACATCCACCCGCCTCCTTCCTTGCCCCTTCCAGGGCAGTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS TCA 72 bp | GCGGCTGCTGCATATCCAGGTCAACCTTTATGGGCCTaGAGACAACCTCTCCTTCGTTTGGGCACTGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: AAAAYPGQPLWA*RQPLLRLGTAR Trigger: CCTAGCAGTGCCCAAACGAAGGAGAGGTTGTCTTCAGGCCCATAAAGGTTGACCTGGATATGCAGCAGCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612671.1 |
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| CDS GCA 72 bp | CACATCTGGCGAATTATCTGGACCATGTTGGCCAGCTaGAAGTTGGGACGAAAGCTGCGACGTGTAAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: HIWRIIWTMLAS*KLGRKLRRVKL Trigger: GAGCTTTACACGTCGCAGCTTTCGTCCCAACTTGCAGCTGGCCAACATGGTCCAGATAATTCGCCAGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503005.1 ENST00000510796.1 ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS GCA 72 bp | CCTAGGGAAAAAGTGAAGCTCAAGGAGGTTGACACCTaGCCAAGACTAGACAGTAAGTGGCAGAGCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PREKVKLKEVDT*PRLDSKWQSQV Trigger: GACCTGGCTCTGCCACTTACTGTCTAGTCTTGGGCAGGTGTCAACCTCCTTGAGCTTCACTTTTTCCCTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612671.1 |
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| CDS CCA 72 bp | TGCCCTGATCATTACTCCGGTTTCCCCGATAAGGAGTaGGGCACATCTGGCGAATTATCTGGACCATGTTGG | + |
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Preference number: 6 (lower is better) Translates to: CPDHYSGFPDKE*GTSGELSGPCW Trigger: CCAACATGGTCCAGATAATTCGCCAGATGTGCCCCACTCCTTATCGGGGAAACCGGAGTAATGATCAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000503005.1 ENST00000510796.1 ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS CCA 72 bp | CTGTCACCGAGCCAGAGTTCATCGTCATCTTGGTCTTaGAACAACTCTTCGTCAGCATTCCCCCGATACAAC | + |
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Preference number: 6 (lower is better) Translates to: LSPSQSSSSSWS*NNSSSAFPRYN Trigger: GTTGTATCGGGGGAATGCTGACGAAGAGTTGTTCCAAGACCAAGATGACGATGAACTCTGGCTCGGTGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS CAA 72 bp | TATACCACTGTCACCGAGCCAGAGTTCATCGTCATCTaGGTCTTGGAACAACTCTTCGTCAGCATTCCCCCG | + |
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Preference number: 6 (lower is better) Translates to: YTTVTEPEFIVI*VLEQLFVSIPP Trigger: CGGGGGAATGCTGACGAAGAGTTGTTCCAAGACCAAGATGACGATGAACTCTGGCTCGGTGACAGTGGTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS TCA 72 bp | AGACTGCCAGTATTAGCAGTAGTGGTCCGCTTCCAGTaGCCGTCATATTATCTGTTCAGCTTCCTCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: RLPVLAVVVRFQ*PSYYLFSFLWG Trigger: TCCCCAGAGGAAGCTGAACAGATAATATGACGGTCACTGGAAGCGGACCACTACTGCTAATACTGGCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514805.1 ENST00000612671.1 |
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| CDS TCA 72 bp | ACCGCGCCCGGCCTGTATCAGGTCTTTATGCCAAAATaGATCATGCAGTCTAGGCTCAGTAGGATAGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: TAPGLYQVFMPK*IMQSRLSRIVR Trigger: CCTTACTATCCTACTGAGCCTAGACTGCATGATTCATTTTGGCATAAAGACCTGATACAGGCCGGGCGCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513146.1 |
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| CDS TCA 72 bp | CCAGGGAATTGGTCAAGGACTCACATTAGGGAGAAATaGAGTACTGGGTATCTGTTACTCACGTCCCTTACA | + |
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Preference number: 6 (lower is better) Translates to: PGNWSRTHIREK*STGYLLLTSLT Trigger: TGTAAGGGACGTGAGTAACAGATACCCAGTACTTCATTTCTCCCTAATGTGAGTCCTTGACCAATTCCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000514805.1 ENST00000612671.1 |
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| CDS CAA 90 bp | CAGGATATGAGGCACATTCTGATCCATCAAAGATGCTTATATGCTTaGCCTTTCTCTAGAAGGAAAACGGACCCCACTGAAGGTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: QDMRHILIHQRCLYA*PFSRRKTDPTEGRD Trigger: ATCTCTACCTTCAGTGGGGTCCGTTTTCCTTCTAGAGAAAGGCAAAGCATATAAGCATCTTTGATGGATCAGAATGTGCCTCATATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000514805.1 ENST00000612671.1 |
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| CDS GCA 72 bp | GTCAGGATACAGCTCTTCATCTTCGTCCTCATCGTATaGTTCCAGTATTTCTTCTTCTCGGTAGACATCAAT | + |
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Preference number: 6 (lower is better) Translates to: VRIQLFIFVLIV*FQYFFFSVDIN Trigger: ATTGATGTCTACCGAGAAGAAGAAATACTGGAAGCATACGATGAGGACGAAGATGAAGAGCTGTATCCTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000514805.1 ENST00000611618.1 ENST00000612671.1 |
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| CDS CAA 72 bp | TGCTTTCTTGCTCTATCTGAAGTATTCCCACCAGAGTaGTTTCCAACTTTATTTCCTGGTACTCCTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: CFLALSEVFPPE*FPTLFPGTPAP Trigger: TGGTGCAGGAGTACCAGGAAATAAAGTTGGAAACAACTCTGGTGGGAATACTTCAGATAGAGCAAGAAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611618.1 |
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| CDS CCA 72 bp | TATAAATGGAATCATATCCTTAATGAACACCTCCTGTaGCTACCCAACTTTTCACACATCTTACTGATTATA | + |
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Preference number: 6 (lower is better) Translates to: YKWNHILNEHLL*LPNFSHILLII Trigger: TATAATCAGTAAGATGTGTGAAAAGTTGGGTAGCCACAGGAGGTGTTCATTAAGGATATGATTCCATTTATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611618.1 ENST00000612671.1 |
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