Pregenerated sensors for TRIM50 (Homo sapiens)
Ensembl gene IDs: ENSG00000146755Ensembl transcript IDs: ENST00000333149.7, ENST00000453152.1, ENST00000488217.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTACATGTTCCAGGGACACACAGGCCTGAAGACCTTCCTAAACAGTaGCGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: LHVPGTHRPEDLPKQ*RYHLRRDPAEARES Trigger: GGACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAGGAAGGTCTTCAGGCCTGTGTGTCCCTGGAACATGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| 3UTR CCA 90 bp | ATTTCTGCCCTCGGAAGCGTCTGCGCAGATAGCATGGTTAGCAAGTaGCAGGAACCATGGGGATTTCAGTGTGTCCCTGGCTGCCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: ISALGSVCADSMVSK*QEPWGFQCVPGCQG Trigger: GCCTTGGCAGCCAGGGACACACTGAAATCCCCATGGTTCCTGCCACTTGCTAACCATGCTATCTGCGCAGACGCTTCCGAGGGCAGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| 3UTR CCA 90 bp | TACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGATAGCATaGTTAGCAAGTGGCAGGAACCATGGGGATTTCAGTGTGTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: YMGLFLPSEASAQIA*LASGRNHGDFSVSL Trigger: CAGGGACACACTGAAATCCCCATGGTTCCTGCCACTTGCTAACCATGCTATCTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGCCCTCGGAAGCGTCTGCGCAGATAGCATGGTTAGCAAGTGGCAGGAACGACCTTCCTAAACAGTaGCGATATCACCTCAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: FLPSEASAQIAWLASGRNDLPKQ*RYHLRR Trigger: CCGCCTGAGGTGATATCGTCACTGTTTAGGAAGGTC...GTTCCTGCCACTTGCTAACCATGCTATCTGCGCAGACGCTTCCGAGGGCAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| 3UTR-3UTR TCA 90 bp | CACAGTAATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTAAATACACCCTTGGCTaGGGGGAAAGGGACTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: HSNMEKVYMGLFLPSEASKYTLG*GERDWG Trigger: ACCCCAGTCCCTTTCCCCTCAGCCAAGGGTGTATTT...AGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATATTACTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| 3UTR CCA 72 bp | CATGGGGATTTCAGTGTGTCCCTGGCTGCCAAGGCCTaGGGGCCGAAGTTTACAAATACACCCTTGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: HGDFSVSLAAKA*GPKFTNTPLAE Trigger: CTCAGCCAAGGGTGTATTTGTAAACTTCGGCCCCCAGGCCTTGGCAGCCAGGGACACACTGAAATCCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| 3UTR CCA 72 bp | CTATTTCTGCCCTCGGAAGCGTCTGCGCAGATAGCATaGTTAGCAAGTGGCAGGAACCATGGGGATTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: LFLPSEASAQIA*LASGRNHGDFS Trigger: ACTGAAATCCCCATGGTTCCTGCCACTTGCTAACCATGCTATCTGCGCAGACGCTTCCGAGGGCAGAAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | GCAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGATGGGCCTGTGGGCCGGCAGGGCGCCAGTCGCTCTTaGTGCCCACCACCACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: AEARESPVPRRDGPVGRQGASRS*CPPPPP Trigger: GGGAGGTGGTGGTGGGCAGCAAGAGCGACTGGCGCC...CTGCCGGCCCACAGGCCCATCCCGGCGGGGCACCGGGGACTCGCGGGCTTCTGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | ATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGTGGGCAGCGAGTTGCTaGCCCTCTCGTGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ITSGGTQQKPASPRCPAGWAASC*PSRASR Trigger: CCTGCTGGCACGAGAGGGGCAGCAACTCGCTGCCCA...CCCGGCGGGGCACCGGGGACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | CAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGATGGGCCTGTGGGCCGGCAGGGCGGCATCTCTGCTCTaGAGGCCATGGAGTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: QKPASPRCPAGMGLWAGRAASLL*RPWSGT Trigger: AGTTCCACTCCATGGCCTCCAGAGCAGAGATGCCGC...CCTGCCGGCCCACAGGCCCATCCCGGCGGGGCACCGGGGACTCGCGGGCTTCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | GACCCAGCAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGATGGGCCTGTGGGCCCACCGTGTTGCCCTTaGAGAGCTCCAGGAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: DPAEARESPVPRRDGPVGPPCCP*RAPGVG Trigger: ACCCACTCCTGGAGCTCTCCAAGGGCAACACGGTGG...GCCCACAGGCCCATCCCGGCGGGGCACCGGGGACTCGCGGGCTTCTGCTGGGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR TCA 90 bp | GCAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGATGGGCCTGTGGGCCGGCAGAAATACACCCTTGGCTaGGGGGAAAGGGACTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: AEARESPVPRRDGPVGRQKYTLG*GERDWG Trigger: ACCCCAGTCCCTTTCCCCTCAGCCAAGGGTGTATTT...CTGCCGGCCCACAGGCCCATCCCGGCGGGGCACCGGGGACTCGCGGGCTTCTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | GACCCAGCAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGATGGGCCTGTGGGCACATGGGACTATTTCTaGCCTCGGAAGCGTCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: DPAEARESPVPRRDGPVGTWDYF*PRKRLR Trigger: GCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGT...GCCCACAGGCCCATCCCGGCGGGGCACCGGGGACTCGCGGGCTTCTGCTGGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | GGACCCAGCAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGATGGGCCTGTGGGTTGATGTCAGCCTGGTaGAGGCCTGGCTTGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GPSRSPRVPGAPPGWACGLMSAW*RPGLKE Trigger: CTCCTTCAAGCCAGGCCTCCACCAGGCTGACATCAA...CCCACAGGCCCATCCCGGCGGGGCACCGGGGACTCGCGGGCTTCTGCTGGGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | GACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTCCCCGGTGCCCCATTTCAGTGTGTCCCTaGCTGCCAAGGCCTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: DDITSGGTQQKPASPRCPISVCP*LPRPGG Trigger: GCCCCCAGGCCTTGGCAGCCAGGGACACACTGAAAT...GGGGCACCGGGGACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | TTCCTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTTGGGCAGGGAGCTGCTaGCGTCCACCGCCTGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: FLNSDDITSGGTQQKPASWAGSC*RPPPAG Trigger: GCCGGCAGGCGGTGGACGGCAGCAGCTCCCTGCCCA...ACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | TTAGCAAGTGGCAGGAACCATGGGGATTTCAGTGTGTCCCTGGCTGCCAAGGCCGCCATCCACACTCACTaGCCGGGCCAGCCTCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LASGRNHGDFSVSLAAKAAIHTH*PGQPPA Trigger: GGCCGGAGGCTGGCCCGGGCAGTGAGTGTGGATGGC...GGCCTTGGCAGCCAGGGACACACTGAAATCCCCATGGTTCCTGCCACTTGCTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | GCCTGGGGGCCGAAGTTTACAAATACACCCTTGGCTGAGGGGAAAGGGACTGGGCAGTGTGTCCCTGGCTaGCAAGGCCTGGGGGCCGAA | + |
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Preference number: 4 (lower is better) Translates to: AWGPKFTNTPLAEGKGTGQCVPG*QGLGAE Trigger: TTCGGCCCCCAGGCCTTGGCAGCCAGGGACACACTG...CCCAGTCCCTTTCCCCTCAGCCAAGGGTGTATTTGTAAACTTCGGCCCCCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR TCA 90 bp | TTCCTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTTGGCAGGGTCCAACTTaGGAGGCTCCGGGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: FLNSDDITSGGTQQKPASWQGPT*EAPGLA Trigger: TGCCAGCCCCGGAGCCTCTCAAGTTGGACCCTGCCA...ACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | CTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTCCCGGATGGGGTAGAGCTTaGCCTGGAAGTCGGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LNSDDITSGGTQQKPASPGWGRA*PGSRPG Trigger: TCCAGGCCGACTTCCAGGGCAAGCTCTACCCCATCC...GGGACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | TTCCTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTCCATGGGCAGCGAGTTaGTGCCCCTCTCGTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLNSDDITSGGTQQKPASPWAAS*CPSRAS Trigger: GCTGGCACGAGAGGGGCAGCAACTCGCTGCCCATGG...ACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | GGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGATAGCATGGTTTCGAAGCGCTCAGGCTaGCTGGCTCGCCGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GIHGTISALGSVCADSMVSKRSG*LARRWA Trigger: GGCCCAGCGGCGAGCCAGCCAGCCTGAGCGCTTCGA...AACCATGCTATCTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | GACCCAGCAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGATGGGCCTGTGGGCAAGTTCACAGTAATATaGAAAAGGTATACATGGGAC | + |
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Preference number: 4 (lower is better) Translates to: DPAEARESPVPRRDGPVGKFTVI*KRYTWD Trigger: GTCCCATGTATACCTTTTCCATATTACTGTGAACTT...GCCCACAGGCCCATCCCGGCGGGGCACCGGGGACTCGCGGGCTTCTGCTGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | GGCCGAAGTTTACAAATACACCCTTGGCTGAGGGGAAAGGGACTGGGGTCCTGTGCCAGAAGCCCGCACTaGACCACCGTGTTGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GRSLQIHPWLRGKGLGSCARSPH*TTVLPL Trigger: CAAGGGCAACACGGTGGTGCAGTGCGGGCTTCTGGC...ACAGGACCCCAGTCCCTTTCCCCTCAGCCAAGGGTGTATTTGTAAACTTCGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | TTCCTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTTGGCCAGGACGCAGGTaGTGTAGTCGAAGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FLNSDDITSGGTQQKPASWPGRR*CSRSAQ Trigger: CTGAGCGCTTCGACTACAGCACCTGCGTCCTGGCCA...ACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | TTCCTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTTTGCTGCCCCTCTCGTaGCAGCAGGTGTCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: FLNSDDITSGGTQQKPASLLPLS*QQVSRM Trigger: CATCCTGGACACCTGCTGGCACGAGAGGGGCAGCAA...ACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | GGCCTGAAGACCTTCCTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGAGCCTGGTGGAGGCCTaGCTTGAAGGAGATGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GLKTFLNSDDITSGGTQQSLVEA*LEGDGA Trigger: AGCCCCATCTCCTTCAAGCCAGGCCTCCACCAGGCT...CTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAGGAAGGTCTTCAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | GCCTGGGGGCCGAAGTTTACAAATACACCCTTGGCTGAGGGGAAAGGGACTGGGGAGAGGCTCCGGGGCTaGCAAAACTTTCCGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: AWGPKFTNTPLAEGKGTGERLRG*QNFPEE Trigger: CTCTTCCGGAAAGTTTTGCCAGCCCCGGAGCCTCTC...CCCAGTCCCTTTCCCCTCAGCCAAGGGTGTATTTGTAAACTTCGGCCCCCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR TCA 90 bp | AGCAAGTGGCAGGAACCATGGGGATTTCAGTGTGTCCCTGGCTGCCAAGGCCTGCGGCATCGAAGAAGGTaGGTTCGCCCTGCTCATAGT | + |
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Preference number: 4 (lower is better) Translates to: SKWQEPWGFQCVPGCQGLRHRRR*VRPAHS Trigger: ACTATGAGCAGGGCGAACTCACCTTCTTCGATGCCG...CAGGCCTTGGCAGCCAGGGACACACTGAAATCCCCATGGTTCCTGCCACTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | AATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGGCGGGGGCAGCACCATaGGCAGCGAGTTGCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: NMEKVYMGLFLPSEASAQAGAAP*AASCCP Trigger: GGGGCAGCAACTCGCTGCCCATGGTGCTGCCCCCGC...CTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | AATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGAGCGCTCAGGCTGGCTaGCTCGCCGCTGGGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: NMEKVYMGLFLPSEASAQSAQAG*LAAGPE Trigger: TTCTGGCCCAGCGGCGAGCCAGCCAGCCTGAGCGCT...CTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR TCA 90 bp | TGGGGTCCTGTTCCCTATCATTACATGTTCCAGGGACACACAGGCCTGAAGACCGTCCGTGCCTCATCATaGCCCGCACGCTATGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: WGPVPYHYMFQGHTGLKTVRASS*PARYGY Trigger: GTAACCATAGCGTGCGGGTCATGATGAGGCACGGAC...GGTCTTCAGGCCTGTGTGTCCCTGGAACATGTAATGATAGGGAACAGGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR TCA 90 bp | GGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGATAGCATGGTTTCCACACGGTCAGCTTaGTGTCAGCCTGGTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: GIHGTISALGSVCADSMVSTRSA*CQPGGG Trigger: GCCTCCACCAGGCTGACATCAAGCTGACCGTGTGGA...AACCATGCTATCTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR TCA 90 bp | CCAAGGCCTGGGGGCCGAAGTTTACAAATACACCCTTGGCTGAGGGGAAAGGGAGACCTTCCTAAACAGTaGCGATATCACCTCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PRPGGRSLQIHPWLRGKGDLPKQ*RYHLRR Trigger: CCGCCTGAGGTGATATCGTCACTGTTTAGGAAGGTC...TCCCTTTCCCCTCAGCCAAGGGTGTATTTGTAAACTTCGGCCCCCAGGCCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | TGGGGTCCTGTTCCCTATCATTACATGTTCCAGGGACACACAGGCCTGAAGACCACTGCACCACCGTGTTaGCCTTGGAGAGCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: WGPVPYHYMFQGHTGLKTTAPPC*PWRAPG Trigger: TCCTGGAGCTCTCCAAGGGCAACACGGTGGTGCAGT...GGTCTTCAGGCCTGTGTGTCCCTGGAACATGTAATGATAGGGAACAGGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | AAGACCTTCCTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCAGCTTGATGTCAGCCTaGTGGAGGCCTGGCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: KTFLNSDDITSGGTQQKPSLMSA*WRPGLK Trigger: CTTCAAGCCAGGCCTCCACCAGGCTGACATCAAGCT...GGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAGGAAGGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | GTTCACAGTAATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTGGCTGGCTCGCCGCTaGGCCAGAAGCCCGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: VHSNMEKVYMGLFLPSEAWLARR*ARSPHC Trigger: GCAGTGCGGGCTTCTGGCCCAGCGGCGAGCCAGCCA...CGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATATTACTGTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | AAGACCTTCCTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCCTGGCTGCCAAGGCCTaGGGGCCGAAGTTTACAAAT | + |
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Preference number: 4 (lower is better) Translates to: KTFLNSDDITSGGTQQKPLAAKA*GPKFTN Trigger: ATTTGTAAACTTCGGCCCCCAGGCCTTGGCAGCCAG...GGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAGGAAGGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | AGTAATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCACGCTATGGTTACATaGCCCGCCTCGCGCTACCGC | + |
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Preference number: 4 (lower is better) Translates to: SNMEKVYMGLFLPSEASAHAMVT*PASRYR Trigger: GCGGTAGCGCGAGGCGGGGCATGTAACCATAGCGTG...CGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATATTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | ATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGAGGGACCTGTTCAGCTTaGCCTTACGGCTGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: IWKRYTWDYFCPRKRLRRGTCSA*PYGWLC Trigger: GCACAGCCAGCCGTAAGGGCAAGCTGAACAGGTCCC...TCTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | GTTCACAGTAATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTAAGGGCCGGGCCTaGGGCATCTCTGCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VHSNMEKVYMGLFLPSEASKGRA*GISALE Trigger: CTCCAGAGCAGAGATGCCGCAGGCCCGGCCCTTAGA...CGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATATTACTGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | CACAGTAATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTATCAGCCACACGCCGTaGTCGGGGGACCTGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: HSNMEKVYMGLFLPSEASISHTP*SGDLFS Trigger: GCTGAACAGGTCCCCCGAGCACGGCGTGTGGCTGAT...AGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATATTACTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR GCA 90 bp | AATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGGCCCTCGGAAGCGTCTaGGCAGATAGCATGGTTAGC | + |
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Preference number: 4 (lower is better) Translates to: NMEKVYMGLFLPSEASAQALGSV*ADSMVS Trigger: GCTAACCATGCTATCTGCGCAGACGCTTCCGAGGGC...CTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | ATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGAAGCAGGTGTCCAGGATaGGGTAGAGCTTGCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IWKRYTWDYFCPRKRLRRSRCPG*GRACPG Trigger: TCCAGGGCAAGCTCTACCCCATCCTGGACACCTGCT...TCTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR TCA 90 bp | ATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGAAGTGGAACTTCCGGATaGACTTGTGGTGGTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: IWKRYTWDYFCPRKRLRRSGTSG*TCGGPH Trigger: ATGAGGACCACCACAAGTTCATCCGGAAGTTCCACT...TCTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | GAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGATAGCAAGCATGGTTAGCAAGTaGCAGGAACCATGGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: EKVYMGLFLPSEASAQIASMVSK*QEPWGF Trigger: AAATCCCCATGGTTCCTGCCACTTGCTAACCATGCT...TGCTATCTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CCA 90 bp | GTTCACAGTAATATGGAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGATAGCATaGTTAGCAAGTGGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VHSNMEKVYMGLFLPSEASAQIA*LASGRN Trigger: GTTCCTGCCACTTGCTAACCATGCTATCTGCGCAGA...CGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTCCATATTACTGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CAA 90 bp | CAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGATGGGCCTGTGGGCCGGCAGGCGGCTGGCTGTGCCCTaGATGACCCCCAGGCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: QKPASPRCPAGMGLWAGRRLAVP*MTPRRQ Trigger: CTGGCGCCTGGGGGTCATCAAGGGCACAGCCAGCCG...CCTGCCGGCCCACAGGCCCATCCCGGCGGGGCACCGGGGACTCGCGGGCTTCTG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS CCA 90 bp | CAGCAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGATGGGCCTGTaGGCCGGCAGGACTCCGGGCGGCCCTACAGCTTGGTGGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: QQKPASPRCPAGMGL*AGRTPGGPTAWWAA Trigger: AGCAGCCCACCAAGCTGTAGGGCCGCCCGGAGTCCTGCCGGCCCACAGGCCCATCCCGGCGGGGCACCGGGGACTCGCGGGCTTCTGCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CAA 90 bp | CAGAAGCCCGCGAGTCCCCGGTGCCCCGCCGGGATGGGCCTGTGGGCCGGCAGGAGGCGCCAGTCGCTCTaGCTGCCCACCACCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: QKPASPRCPAGMGLWAGRRRQSL*LPTTTS Trigger: GGAGGTGGTGGTGGGCAGCAAGAGCGACTGGCGCCT...CCTGCCGGCCCACAGGCCCATCCCGGCGGGGCACCGGGGACTCGCGGGCTTCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS GCA 90 bp | GGCCAGGCCCGCTGGGCGGGGGCAGCACCATGGGCAGCGAGTTGCTaGCCCTCTCGTGCCAGCAGGTGTCCAGGATGGGGTAGAGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: GQARWAGAAPWAASC*PSRASRCPGWGRAC Trigger: GCAAGCTCTACCCCATCCTGGACACCTGCTGGCACGAGAGGGGCAGCAACTCGCTGCCCATGGTGCTGCCCCCGCCCAGCGGGCCTGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS CCA 90 bp | GGCTGGCCAGGACGCAGGTGCTGTAGTCGAAGCGCTCAGGCTGGCTaGCTCGCCGCTGGGCCAGAAGCCCGCACTGCACCACCGTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GWPGRRCCSRSAQAG*LAAGPEARTAPPCC Trigger: GCAACACGGTGGTGCAGTGCGGGCTTCTGGCCCAGCGGCGAGCCAGCCAGCCTGAGCGCTTCGACTACAGCACCTGCGTCCTGGCCAGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000333149.7 ENST00000453152.1 ENST00000488217.1 |
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| CDS GCA 90 bp | GCTTCGTACACCCGGCCCTCCTTCAGGCCGATCAGCCACACGCCGTaGTCGGGGGACCTGTTCAGCTTGCCCTTACGGCTGGCTGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: ASYTRPSFRPISHTP*SGDLFSLPLRLAVP Trigger: GGGCACAGCCAGCCGTAAGGGCAAGCTGAACAGGTCCCCCGAGCACGGCGTGTGGCTGATCGGCCTGAAGGAGGGCCGGGTGTACGAAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS-3UTR CAA 90 bp | GACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTCCCCGGTGCCCCTTCCACACGGTCAGCTaGATGTCAGCCTGGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: DDITSGGTQQKPASPRCPFHTVS*MSAWWR Trigger: CCTCCACCAGGCTGACATCAAGCTGACCGTGTGGAA...GGGGCACCGGGGACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS TCA 90 bp | TGTAGAGCGGCCGCAGGTCATCGGGGCGGTCGGCATCGAAGAAGGTaGGTTCGCCCTGCTCATAGTGCAGGTAGAGCCCGATGCGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: CRAAAGHRGGRHRRR*VRPAHSAGRARCGG Trigger: CCCACCGCATCGGGCTCTACCTGCACTATGAGCAGGGCGAACTCACCTTCTTCGATGCCGACCGCCCCGATGACCTGCGGCCGCTCTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS GCA 90 bp | TGCTGCCCCTCTCGTGCCAGCAGGTGTCCAGGATGGGGTAGAGCTTaGCCTGGAAGTCGGCCTGGAAGGTGTAGAGCGGCCGCAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: CCPSRASRCPGWGRA*PGSRPGRCRAAAGH Trigger: ATGACCTGCGGCCGCTCTACACCTTCCAGGCCGACTTCCAGGGCAAGCTCTACCCCATCCTGGACACCTGCTGGCACGAGAGGGGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS-3UTR CAA 90 bp | GGCCTGAAGACCTTCCTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGGGGCGGCCCTACAGCTaGGTGGGCTGCTCGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GLKTFLNSDDITSGGTQQGRPYS*VGCSGL Trigger: CAGCCCCGAGCAGCCCACCAAGCTGTAGGGCCGCCC...CTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAGGAAGGTCTTCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CAA 90 bp | CTAAACAGTGACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTCCCACCACCGTGTTGCCCTaGGAGAGCTCCAGGAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LNSDDITSGGTQQKPASPTTVLP*ESSRSG Trigger: CCCACTCCTGGAGCTCTCCAAGGGCAACACGGTGGT...GGGACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACTGTTTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CAA 90 bp | AGTGACGATATCACCTCAGGCGGGACCCAGCAGAAGCCCGCGAGTCCCCGGTGCAAGACATCCGACTCATaGACGATTCGGGTCCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SDDITSGGTQQKPASPRCKTSDS*TIRVRL Trigger: CAACCGGACCCGAATCGTCAATGAGTCGGATGTCTT...GCACCGGGGACTCGCGGGCTTCTGCTGGGTCCCGCCTGAGGTGATATCGTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS-3UTR CAA 90 bp | AGCATGGTTAGCAAGTGGCAGGAACCATGGGGATTTCAGTGTGTCCCTGGCTGCGTGGCAGGGTCCAACTaGAGAGGCTCCGGGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: SMVSKWQEPWGFQCVPGCVAGSN*RGSGAG Trigger: GCCAGCCCCGGAGCCTCTCAAGTTGGACCCTGCCAC...GCAGCCAGGGACACACTGAAATCCCCATGGTTCCTGCCACTTGCTAACCATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS TCA 90 bp | ATGCGCCTTCTAAGGGCCGGGCCTGCGGCATCTCTGCTCTGCAGGTaGCAGTTCACAGTACAAGAGAGTGAGGTATCACGTGGCCCACCC | + |
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Preference number: 5 (lower is better) Translates to: MRLLRAGPAASLLCR*QFTVQESEVSRGPP Trigger: GGGTGGGCCACGTGATACCTCACTCTCTTGTACTGTGAACTGTCACCTGCAGAGCAGAGATGCCGCAGGCCCGGCCCTTAGAAGGCGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS GCA 90 bp | GGCTTGAAGGAGATGGGGCTGAATGCGCCTTCTAAGGGCCGGGCCTaGGGCATCTCTGCTCTGCAGGTGACAGTTCACAGTACAAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: GLKEMGLNAPSKGRA*GISALQVTVHSTRE Trigger: CTCTCTTGTACTGTGAACTGTCACCTGCAGAGCAGAGATGCCGCAGGCCCGGCCCTTAGAAGGCGCATTCAGCCCCATCTCCTTCAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS-3UTR CAA 90 bp | ATAGCATGGTTAGCAAGTGGCAGGAACCATGGGGATTTCAGTGTGTCCCTGGCTACCATGGGCAGCGAGTaGCTGCCCCTCTCGTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: IAWLASGRNHGDFSVSLATMGSE*LPLSCQ Trigger: CTGGCACGAGAGGGGCAGCAACTCGCTGCCCATGGT...AGCCAGGGACACACTGAAATCCCCATGGTTCCTGCCACTTGCTAACCATGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS CCA 90 bp | TTCCGGAAGAGCCTTTTCCACACGGTCAGCTTGATGTCAGCCTGGTaGAGGCCTGGCTTGAAGGAGATGGGGCTGAATGCGCCTTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: FRKSLFHTVSLMSAW*RPGLKEMGLNAPSK Trigger: CTTAGAAGGCGCATTCAGCCCCATCTCCTTCAAGCCAGGCCTCCACCAGGCTGACATCAAGCTGACCGTGTGGAAAAGGCTCTTCCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000333149.7 ENST00000453152.1 ENST00000488217.1 |
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| CDS CCA 90 bp | ACTTTCCGGAAGAGCCTTTTCCACACGGTCAGCTTGATGTCAGCCTaGTGGAGGCCTGGCTTGAAGGAGATGGGGCTGAATGCGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TFRKSLFHTVSLMSA*WRPGLKEMGLNAPS Trigger: AGAAGGCGCATTCAGCCCCATCTCCTTCAAGCCAGGCCTCCACCAGGCTGACATCAAGCTGACCGTGTGGAAAAGGCTCTTCCGGAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000333149.7 ENST00000453152.1 ENST00000488217.1 |
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| CDS GCA 90 bp | CTCCATCCTATCTATGTTTGCCCAGCCAGATCCACAGTGCAGGACTaGAGTCACAATGCCCATCAATGCCCATCATCCCCTCCCCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: LHPIYVCPARSTVQD*SHNAHQCPSSPPLH Trigger: GTGCAGGGGAGGGGATGATGGGCATTGATGGGCATTGTGACTGCAGTCCTGCACTGTGGATCTGGCTGGGCAAACATAGATAGGATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS-3UTR CAA 90 bp | GAAAAGGTATACATGGGACTATTTCTGCCCTCGGAAGCGTCTGCGCAGATAGCAGGGGACCTGTTCAGCTaGCCCTTACGGCTGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: EKVYMGLFLPSEASAQIAGDLFS*PLRLAV Trigger: CACAGCCAGCCGTAAGGGCAAGCTGAACAGGTCCCC...TGCTATCTGCGCAGACGCTTCCGAGGGCAGAAATAGTCCCATGTATACCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333149.7 |
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| CDS TCA 90 bp | TGCGGCATCTCTGCTCTGCAGGTGACAGTTCACAGTACAAGAGAGTaGGGTATCACGTGGCCCACCCCACCCCTCCATCCTATCTATGTT | + |
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Preference number: 5 (lower is better) Translates to: CGISALQVTVHSTRE*GITWPTPPLHPIYV Trigger: AACATAGATAGGATGGAGGGGTGGGGTGGGCCACGTGATACCTCACTCTCTTGTACTGTGAACTGTCACCTGCAGAGCAGAGATGCCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS GCA 72 bp | GCCCGCTGGGCGGGGGCAGCACCATGGGCAGCGAGTTaGTGCCCCTCTCGTGCCAGCAGGTGTCCAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: ARWAGAAPWAAS*CPSRASRCPGW Trigger: CCATCCTGGACACCTGCTGGCACGAGAGGGGCAGCAACTCGCTGCCCATGGTGCTGCCCCCGCCCAGCGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS CAA 72 bp | GGCCCGCTGGGCGGGGGCAGCACCATGGGCAGCGAGTaGCTGCCCCTCTCGTGCCAGCAGGTGTCCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: GPLGGGSTMGSE*LPLSCQQVSRM Trigger: CATCCTGGACACCTGCTGGCACGAGAGGGGCAGCAACTCGCTGCCCATGGTGCTGCCCCCGCCCAGCGGGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS GCA 72 bp | CGCTGGGCGGGGGCAGCACCATGGGCAGCGAGTTGCTaGCCCTCTCGTGCCAGCAGGTGTCCAGGATGGGGT | + |
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Preference number: 6 (lower is better) Translates to: RWAGAAPWAASC*PSRASRCPGWG Trigger: ACCCCATCCTGGACACCTGCTGGCACGAGAGGGGCAGCAACTCGCTGCCCATGGTGCTGCCCCCGCCCAGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS CCA 72 bp | GGACGCAGGTGCTGTAGTCGAAGCGCTCAGGCTGGCTaGCTCGCCGCTGGGCCAGAAGCCCGCACTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: GRRCCSRSAQAG*LAAGPEARTAP Trigger: TGGTGCAGTGCGGGCTTCTGGCCCAGCGGCGAGCCAGCCAGCCTGAGCGCTTCGACTACAGCACCTGCGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000333149.7 ENST00000453152.1 ENST00000488217.1 |
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| CDS GCA 72 bp | ACCCGGCCCTCCTTCAGGCCGATCAGCCACACGCCGTaGTCGGGGGACCTGTTCAGCTTGCCCTTACGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TRPSFRPISHTP*SGDLFSLPLRL Trigger: CAGCCGTAAGGGCAAGCTGAACAGGTCCCCCGAGCACGGCGTGTGGCTGATCGGCCTGAAGGAGGGCCGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS CAA 90 bp | TGCTCGGGGGACCTGTTCAGCTTGCCCTTACGGCTGGCTGTGCCCTaGATGACCCCCAGGCGCCAGTCGCTCTTGCTGCCCACCACCACC | + |
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Preference number: 6 (lower is better) Translates to: CSGDLFSLPLRLAVP*MTPRRQSLLLPTTT Trigger: GGTGGTGGTGGGCAGCAAGAGCGACTGGCGCCTGGGGGTCATCAAGGGCACAGCCAGCCGTAAGGGCAAGCTGAACAGGTCCCCCGAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS CAA 90 bp | TTCAGGCCGATCAGCCACACGCCGTGCTCGGGGGACCTGTTCAGCTaGCCCTTACGGCTGGCTGTGCCCTTGATGACCCCCAGGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: FRPISHTPCSGDLFS*PLRLAVPLMTPRRQ Trigger: CTGGCGCCTGGGGGTCATCAAGGGCACAGCCAGCCGTAAGGGCAAGCTGAACAGGTCCCCCGAGCACGGCGTGTGGCTGATCGGCCTGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS CAA 72 bp | GACCTGTTCAGCTTGCCCTTACGGCTGGCTGTGCCCTaGATGACCCCCAGGCGCCAGTCGCTCTTGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: DLFSLPLRLAVP*MTPRRQSLLLP Trigger: GGGCAGCAAGAGCGACTGGCGCCTGGGGGTCATCAAGGGCACAGCCAGCCGTAAGGGCAAGCTGAACAGGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS CAA 72 bp | ATCAGCCACACGCCGTGCTCGGGGGACCTGTTCAGCTaGCCCTTACGGCTGGCTGTGCCCTTGATGACCCCC | + |
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Preference number: 6 (lower is better) Translates to: ISHTPCSGDLFS*PLRLAVPLMTP Trigger: GGGGGTCATCAAGGGCACAGCCAGCCGTAAGGGCAAGCTGAACAGGTCCCCCGAGCACGGCGTGTGGCTGAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS TCA 72 bp | GCCGCAGGTCATCGGGGCGGTCGGCATCGAAGAAGGTaGGTTCGCCCTGCTCATAGTGCAGGTAGAGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: AAGHRGGRHRRR*VRPAHSAGRAR Trigger: TCGGGCTCTACCTGCACTATGAGCAGGGCGAACTCACCTTCTTCGATGCCGACCGCCCCGATGACCTGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS GCA 72 bp | TCTCGTGCCAGCAGGTGTCCAGGATGGGGTAGAGCTTaGCCTGGAAGTCGGCCTGGAAGGTGTAGAGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SRASRCPGWGRA*PGSRPGRCRAA Trigger: GGCCGCTCTACACCTTCCAGGCCGACTTCCAGGGCAAGCTCTACCCCATCCTGGACACCTGCTGGCACGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333149.7 ENST00000453152.1 |
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| CDS CAA 90 bp | CTTTTCCACACGGTCAGCTTGATGTCAGCCTGGTGGAGGCCTGGCTaGAAGGAGATGGGGCTGAATGCGCCTTCTAAGGGCCGGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LFHTVSLMSAWWRPG*KEMGLNAPSKGRAC Trigger: GCAGGCCCGGCCCTTAGAAGGCGCATTCAGCCCCATCTCCTTCAAGCCAGGCCTCCACCAGGCTGACATCAAGCTGACCGTGTGGAAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000333149.7 ENST00000453152.1 ENST00000488217.1 |
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| CDS GCA 72 bp | GAGATGGGGCTGAATGCGCCTTCTAAGGGCCGGGCCTaGGGCATCTCTGCTCTGCAGGTGACAGTTCACAGT | + |
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Preference number: 6 (lower is better) Translates to: EMGLNAPSKGRA*GISALQVTVHS Trigger: ACTGTGAACTGTCACCTGCAGAGCAGAGATGCCGCAGGCCCGGCCCTTAGAAGGCGCATTCAGCCCCATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS GCA 72 bp | CCCAGCCAGATCCACAGTGCAGGACTGCAGTCACAATaGCCATCAATGCCCATCATCCCCTCCCCTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: PSQIHSAGLQSQ*PSMPIIPSPAQ Trigger: CTGTGCAGGGGAGGGGATGATGGGCATTGATGGGCATTGTGACTGCAGTCCTGCACTGTGGATCTGGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS GCA 72 bp | ACGTGGCCCACCCCACCCCTCCATCCTATCTATGTTTaGCCAGCCAGATCCACAGTGCAGGACTGCAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: TWPTPPLHPIYV*PARSTVQDCSH Trigger: GTGACTGCAGTCCTGCACTGTGGATCTGGCTGGGCAAACATAGATAGGATGGAGGGGTGGGGTGGGCCACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS CAA 72 bp | ACGGTCAGCTTGATGTCAGCCTGGTGGAGGCCTGGCTaGAAGGAGATGGGGCTGAATGCGCCTTCTAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: TVSLMSAWWRPG*KEMGLNAPSKG Trigger: GCCCTTAGAAGGCGCATTCAGCCCCATCTCCTTCAAGCCAGGCCTCCACCAGGCTGACATCAAGCTGACCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000333149.7 ENST00000453152.1 ENST00000488217.1 |
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| CDS CAA 72 bp | CACGTGGCCCACCCCACCCCTCCATCCTATCTATGTTaGCCCAGCCAGATCCACAGTGCAGGACTGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: HVAHPTPPSYLC*PSQIHSAGLQS Trigger: TGACTGCAGTCCTGCACTGTGGATCTGGCTGGGCAAACATAGATAGGATGGAGGGGTGGGGTGGGCCACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS CAA 90 bp | GTGAGGTATCACGTGGCCCACCCCACCCCTCCATCCTATCTATGTTaGCCCAGCCAGATCCACAGTGCAGGACTGCAGTCACAATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VRYHVAHPTPPSYLC*PSQIHSAGLQSQCP Trigger: TGGGCATTGTGACTGCAGTCCTGCACTGTGGATCTGGCTGGGCAAACATAGATAGGATGGAGGGGTGGGGTGGGCCACGTGATACCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS TCA 72 bp | TCTGCTCTGCAGGTGACAGTTCACAGTACAAGAGAGTaGGGTATCACGTGGCCCACCCCACCCCTCCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: SALQVTVHSTRE*GITWPTPPLHP Trigger: AGGATGGAGGGGTGGGGTGGGCCACGTGATACCTCACTCTCTTGTACTGTGAACTGTCACCTGCAGAGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS TCA 72 bp | CTAAGGGCCGGGCCTGCGGCATCTCTGCTCTGCAGGTaGCAGTTCACAGTACAAGAGAGTGAGGTATCACGT | + |
|
Preference number: 6 (lower is better) Translates to: LRAGPAASLLCR*QFTVQESEVSR Trigger: ACGTGATACCTCACTCTCTTGTACTGTGAACTGTCACCTGCAGAGCAGAGATGCCGCAGGCCCGGCCCTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS CAA 72 bp | AAAACTTTCCGGAAGAGCCTTTTCCACACGGTCAGCTaGATGTCAGCCTGGTGGAGGCCTGGCTTGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KTFRKSLFHTVS*MSAWWRPGLKE Trigger: CTCCTTCAAGCCAGGCCTCCACCAGGCTGACATCAAGCTGACCGTGTGGAAAAGGCTCTTCCGGAAAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000333149.7 ENST00000453152.1 ENST00000488217.1 |
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| CDS GCA 72 bp | ATCTATGTTTGCCCAGCCAGATCCACAGTGCAGGACTaGAGTCACAATGCCCATCAATGCCCATCATCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: IYVCPARSTVQD*SHNAHQCPSSP Trigger: AGGGGATGATGGGCATTGATGGGCATTGTGACTGCAGTCCTGCACTGTGGATCTGGCTGGGCAAACATAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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| CDS GCA 72 bp | TCCATCCTATCTATGTTTGCCCAGCCAGATCCACAGTaGAGGACTGCAGTCACAATGCCCATCAATGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: SILSMFAQPDPQ*RTAVTMPINAH Trigger: ATGGGCATTGATGGGCATTGTGACTGCAGTCCTGCACTGTGGATCTGGCTGGGCAAACATAGATAGGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488217.1 |
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